Query 008172
Match_columns 575
No_of_seqs 192 out of 1519
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 19:52:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008172.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008172hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gr4_A Pyruvate kinase isozyme 100.0 9E-139 3E-143 1137.3 50.6 491 62-575 44-550 (550)
2 4drs_A Pyruvate kinase; glycol 100.0 2E-137 6E-142 1126.3 50.0 477 86-575 41-526 (526)
3 3khd_A Pyruvate kinase; malari 100.0 2E-136 6E-141 1113.1 46.5 473 86-574 43-519 (520)
4 3hqn_D Pyruvate kinase, PK; TI 100.0 2E-136 7E-141 1110.6 46.2 474 86-574 17-498 (499)
5 3gg8_A Pyruvate kinase; malari 100.0 1E-135 4E-140 1106.5 46.1 475 86-575 33-511 (511)
6 3t05_A Pyruvate kinase, PK; te 100.0 4E-134 1E-138 1115.2 46.1 477 81-575 15-494 (606)
7 1e0t_A Pyruvate kinase, PK; ph 100.0 2E-133 7E-138 1083.9 46.8 468 88-574 1-470 (470)
8 2e28_A Pyruvate kinase, PK; al 100.0 2E-130 6E-135 1088.2 49.6 471 87-574 1-474 (587)
9 3qtg_A Pyruvate kinase, PK; TI 100.0 6E-130 2E-134 1049.0 42.7 444 87-572 13-460 (461)
10 1a3w_A Pyruvate kinase; allost 100.0 5E-129 2E-133 1057.5 40.7 487 64-574 4-500 (500)
11 1izc_A Macrophomate synthase i 99.7 2.2E-18 7.6E-23 180.5 7.5 150 267-431 106-301 (339)
12 2vws_A YFAU, 2-keto-3-deoxy su 99.7 2.5E-18 8.7E-23 174.5 -1.0 129 265-407 77-239 (267)
13 2v5j_A 2,4-dihydroxyhept-2-ENE 99.7 4.5E-18 1.5E-22 174.5 -0.9 129 265-407 98-260 (287)
14 1dxe_A 2-dehydro-3-deoxy-galac 99.6 6.5E-17 2.2E-21 163.1 1.4 130 265-408 78-240 (256)
15 3qz6_A HPCH/HPAI aldolase; str 99.6 1.6E-15 5.5E-20 153.5 9.9 130 266-408 76-239 (261)
16 1sgj_A Citrate lyase, beta sub 99.5 2.8E-14 9.7E-19 145.7 7.2 137 260-404 75-220 (284)
17 2xz9_A Phosphoenolpyruvate-pro 99.2 2.1E-11 7.1E-16 127.0 9.9 136 259-405 116-277 (324)
18 2ols_A Phosphoenolpyruvate syn 99.0 1.7E-10 5.8E-15 133.0 6.0 134 263-406 622-778 (794)
19 3qll_A Citrate lyase; beta bar 99.0 9E-10 3.1E-14 114.3 8.7 126 268-404 117-255 (316)
20 1u5h_A CITE; TIM barrel, struc 98.9 1.6E-09 5.3E-14 110.2 8.8 122 268-405 74-209 (273)
21 2hwg_A Phosphoenolpyruvate-pro 98.9 1.2E-09 3.9E-14 121.6 7.4 126 269-405 375-526 (575)
22 2wqd_A Phosphoenolpyruvate-pro 98.9 2.6E-09 8.8E-14 118.8 8.7 126 269-405 377-528 (572)
23 3qqw_A Putative citrate lyase; 98.8 1.3E-08 4.3E-13 106.4 9.2 127 268-404 98-254 (332)
24 3r4i_A Citrate lyase; TIM beta 98.7 4.5E-08 1.5E-12 102.5 11.0 101 268-368 97-222 (339)
25 3oyz_A Malate synthase; TIM ba 98.4 2.2E-07 7.7E-12 99.3 7.6 131 267-404 98-258 (433)
26 1vbg_A Pyruvate,orthophosphate 98.2 3.2E-06 1.1E-10 98.2 10.4 118 278-406 701-861 (876)
27 1kbl_A PPDK, pyruvate phosphat 98.0 9.4E-06 3.2E-10 94.2 10.1 117 278-405 695-854 (873)
28 1h6z_A Pyruvate phosphate diki 97.0 0.0019 6.7E-08 75.1 10.8 136 259-405 698-880 (913)
29 3cuz_A MSA, malate synthase A; 97.0 0.00084 2.9E-08 73.8 6.9 132 269-405 196-366 (532)
30 3cux_A Malate synthase; TIM ba 96.8 0.0066 2.3E-07 66.7 11.6 122 276-405 202-364 (528)
31 1p7t_A MSG, malate synthase G; 96.7 0.0013 4.4E-08 73.9 5.4 130 269-405 373-536 (731)
32 1vp8_A Hypothetical protein AF 96.1 0.14 4.9E-06 49.1 14.8 103 455-559 27-170 (201)
33 1t57_A Conserved protein MTH16 95.6 0.21 7.1E-06 48.1 13.8 103 455-559 35-177 (206)
34 2x0s_A Pyruvate phosphate diki 95.3 0.061 2.1E-06 63.0 11.1 114 281-405 727-880 (913)
35 3f4w_A Putative hexulose 6 pho 94.4 0.32 1.1E-05 46.1 11.5 134 270-425 69-207 (211)
36 4af0_A Inosine-5'-monophosphat 94.1 0.5 1.7E-05 52.0 13.7 125 264-405 279-413 (556)
37 4fo4_A Inosine 5'-monophosphat 94.0 1 3.5E-05 47.3 15.4 123 265-405 107-240 (366)
38 3ffs_A Inosine-5-monophosphate 93.6 0.58 2E-05 49.8 12.9 119 268-405 146-275 (400)
39 1h1y_A D-ribulose-5-phosphate 93.6 0.55 1.9E-05 45.5 11.8 139 268-426 77-222 (228)
40 3ovp_A Ribulose-phosphate 3-ep 92.9 0.64 2.2E-05 45.5 11.1 141 269-427 78-219 (228)
41 4fxs_A Inosine-5'-monophosphat 92.8 1.4 4.9E-05 47.9 14.7 124 264-405 229-363 (496)
42 3usb_A Inosine-5'-monophosphat 92.6 1.1 3.9E-05 48.9 13.6 125 265-405 255-388 (511)
43 3inp_A D-ribulose-phosphate 3- 92.5 0.81 2.8E-05 45.5 11.3 140 269-425 100-243 (246)
44 3khj_A Inosine-5-monophosphate 92.4 1.7 5.8E-05 45.4 14.1 119 268-405 107-236 (361)
45 2z6i_A Trans-2-enoyl-ACP reduc 92.4 1.2 4.2E-05 45.6 12.8 111 269-405 79-191 (332)
46 4avf_A Inosine-5'-monophosphat 92.0 1 3.5E-05 48.9 12.4 123 265-405 228-361 (490)
47 3r2g_A Inosine 5'-monophosphat 91.7 1.2 4E-05 46.8 11.9 118 265-405 99-228 (361)
48 3igs_A N-acetylmannosamine-6-p 91.5 3 0.0001 40.7 13.9 133 267-425 90-227 (232)
49 1y0e_A Putative N-acetylmannos 91.3 2.9 9.9E-05 39.7 13.4 136 267-422 77-218 (223)
50 3ctl_A D-allulose-6-phosphate 91.0 2.7 9.2E-05 41.1 13.0 138 270-425 72-217 (231)
51 2fli_A Ribulose-phosphate 3-ep 91.0 1.6 5.6E-05 41.3 11.3 137 270-424 76-217 (220)
52 1jcn_A Inosine monophosphate d 90.8 3.3 0.00011 45.0 14.8 119 267-406 256-388 (514)
53 3ajx_A 3-hexulose-6-phosphate 90.4 2.7 9.1E-05 39.5 12.0 131 271-422 70-203 (207)
54 3bo9_A Putative nitroalkan dio 90.2 2.8 9.7E-05 42.9 13.0 112 268-405 92-205 (326)
55 1ydn_A Hydroxymethylglutaryl-C 89.9 1.4 4.9E-05 44.2 10.3 153 262-425 22-194 (295)
56 3bw2_A 2-nitropropane dioxygen 89.4 6.2 0.00021 40.8 15.0 112 268-405 112-237 (369)
57 1tqj_A Ribulose-phosphate 3-ep 89.2 1.1 3.6E-05 43.8 8.4 138 269-423 76-219 (230)
58 2gjl_A Hypothetical protein PA 88.6 4.5 0.00016 41.1 13.0 114 268-405 86-201 (328)
59 3odm_A Pepcase, PEPC, phosphoe 88.4 0.32 1.1E-05 53.4 4.3 93 277-369 138-259 (560)
60 3nvt_A 3-deoxy-D-arabino-heptu 88.3 2.6 8.9E-05 44.5 11.2 113 268-405 159-283 (385)
61 2c6q_A GMP reductase 2; TIM ba 88.1 3.1 0.00011 43.2 11.5 123 267-406 119-253 (351)
62 3q58_A N-acetylmannosamine-6-p 87.4 2.2 7.6E-05 41.6 9.4 129 267-421 90-223 (229)
63 1jqo_A Phosphoenolpyruvate car 87.0 0.95 3.3E-05 53.1 7.4 99 272-370 519-638 (970)
64 1gte_A Dihydropyrimidine dehyd 86.3 2.3 7.7E-05 50.3 10.3 119 272-406 655-817 (1025)
65 1geq_A Tryptophan synthase alp 86.0 9.1 0.00031 36.9 13.0 120 268-405 98-220 (248)
66 2qjg_A Putative aldolase MJ040 85.7 14 0.00047 36.2 14.3 134 268-427 102-259 (273)
67 1vrd_A Inosine-5'-monophosphat 85.6 5.8 0.0002 42.7 12.4 118 267-405 238-369 (494)
68 3cu2_A Ribulose-5-phosphate 3- 85.4 5.7 0.00019 39.0 11.1 134 268-423 82-234 (237)
69 2qjg_A Putative aldolase MJ040 85.3 5.4 0.00019 39.1 11.1 45 104-148 102-148 (273)
70 3ble_A Citramalate synthase fr 85.0 5.3 0.00018 41.1 11.2 159 262-427 37-210 (337)
71 3qja_A IGPS, indole-3-glycerol 85.0 12 0.00043 37.3 13.7 130 268-422 125-259 (272)
72 4g9p_A 4-hydroxy-3-methylbut-2 84.8 2.3 8E-05 45.0 8.4 98 269-371 42-144 (406)
73 1yad_A Regulatory protein TENI 84.6 13 0.00043 35.3 13.0 131 272-425 82-212 (221)
74 3eeg_A 2-isopropylmalate synth 84.4 18 0.0006 37.1 14.8 157 262-427 24-192 (325)
75 1eep_A Inosine 5'-monophosphat 84.4 8.1 0.00028 40.5 12.6 121 266-405 153-285 (404)
76 1ydo_A HMG-COA lyase; TIM-barr 84.2 10 0.00034 38.6 12.8 159 261-425 23-196 (307)
77 1h1y_A D-ribulose-5-phosphate 84.2 5.7 0.0002 38.2 10.5 130 268-424 22-167 (228)
78 1zco_A 2-dehydro-3-deoxyphosph 84.2 11 0.00039 37.4 12.9 127 268-419 40-180 (262)
79 1me8_A Inosine-5'-monophosphat 84.0 9.1 0.00031 41.5 13.1 119 268-405 244-381 (503)
80 2ftp_A Hydroxymethylglutaryl-C 84.0 8.9 0.0003 38.7 12.2 158 262-425 26-198 (302)
81 1ypf_A GMP reductase; GUAC, pu 83.6 2 6.7E-05 44.2 7.2 118 265-406 105-240 (336)
82 3vnd_A TSA, tryptophan synthas 83.6 5.5 0.00019 39.8 10.3 118 269-405 114-235 (267)
83 1ka9_F Imidazole glycerol phos 83.6 7.8 0.00027 37.3 11.2 133 267-419 86-240 (252)
84 1jqn_A Pepcase, PEPC, phosphoe 83.6 0.79 2.7E-05 53.3 4.6 93 278-370 468-578 (883)
85 1rpx_A Protein (ribulose-phosp 83.4 6.4 0.00022 37.6 10.4 136 269-422 82-224 (230)
86 2cw6_A Hydroxymethylglutaryl-C 82.6 7.1 0.00024 39.3 10.8 160 262-427 23-197 (298)
87 3nav_A Tryptophan synthase alp 82.3 7.8 0.00027 38.9 10.8 118 269-405 116-237 (271)
88 3jr2_A Hexulose-6-phosphate sy 81.6 4.1 0.00014 38.9 8.3 137 270-425 75-213 (218)
89 1f76_A Dihydroorotate dehydrog 81.5 6.9 0.00024 39.8 10.4 116 277-405 164-318 (336)
90 1vhc_A Putative KHG/KDPG aldol 81.4 10 0.00035 36.8 11.0 104 268-404 32-136 (224)
91 1nvm_A HOA, 4-hydroxy-2-oxoval 81.3 20 0.0007 36.7 13.9 150 262-428 26-191 (345)
92 1thf_D HISF protein; thermophI 81.0 12 0.00039 36.1 11.4 135 266-420 84-240 (253)
93 1mxs_A KDPG aldolase; 2-keto-3 81.0 16 0.00053 35.5 12.2 104 268-404 41-145 (225)
94 1zfj_A Inosine monophosphate d 80.7 23 0.00077 37.9 14.6 124 266-405 233-365 (491)
95 2yw3_A 4-hydroxy-2-oxoglutarat 80.0 10 0.00035 36.2 10.4 102 268-404 28-130 (207)
96 1yxy_A Putative N-acetylmannos 79.4 14 0.00049 35.1 11.3 131 267-423 90-230 (234)
97 1h5y_A HISF; histidine biosynt 78.9 12 0.00039 35.6 10.5 121 267-406 88-228 (253)
98 3rmj_A 2-isopropylmalate synth 78.4 38 0.0013 35.3 14.9 157 262-427 30-198 (370)
99 2wqp_A Polysialic acid capsule 78.2 39 0.0013 35.1 14.8 119 268-415 38-188 (349)
100 3glc_A Aldolase LSRF; TIM barr 78.0 20 0.0007 36.3 12.4 131 270-427 130-279 (295)
101 1jub_A Dihydroorotate dehydrog 77.9 10 0.00034 38.0 10.1 144 269-432 110-293 (311)
102 3tsm_A IGPS, indole-3-glycerol 77.4 23 0.00079 35.4 12.5 132 268-421 132-265 (272)
103 2qr6_A IMP dehydrogenase/GMP r 77.2 8.1 0.00028 40.3 9.5 114 271-406 171-307 (393)
104 2h6r_A Triosephosphate isomera 76.5 11 0.00038 36.1 9.6 129 272-420 76-214 (219)
105 3ewb_X 2-isopropylmalate synth 76.5 54 0.0018 32.9 15.0 156 262-426 23-190 (293)
106 1qop_A Tryptophan synthase alp 76.5 11 0.00037 37.3 9.7 118 268-405 112-234 (268)
107 4e38_A Keto-hydroxyglutarate-a 76.1 11 0.00038 36.9 9.5 102 271-405 52-154 (232)
108 3g8r_A Probable spore coat pol 76.0 23 0.0008 36.8 12.3 95 291-414 78-174 (350)
109 3b4u_A Dihydrodipicolinate syn 75.8 18 0.00063 36.2 11.4 99 269-370 28-139 (294)
110 2v82_A 2-dehydro-3-deoxy-6-pho 75.4 44 0.0015 31.1 13.3 128 268-428 70-203 (212)
111 1tqx_A D-ribulose-5-phosphate 75.2 11 0.00037 36.7 9.1 130 279-425 86-221 (227)
112 3hgj_A Chromate reductase; TIM 74.9 21 0.00071 36.7 11.7 132 262-405 141-318 (349)
113 3m47_A Orotidine 5'-phosphate 74.7 20 0.00068 34.7 10.9 128 270-424 83-221 (228)
114 2ekc_A AQ_1548, tryptophan syn 74.7 14 0.00047 36.5 9.9 118 268-405 112-234 (262)
115 1wbh_A KHG/KDPG aldolase; lyas 74.6 17 0.00057 34.9 10.2 104 268-404 31-135 (214)
116 1xi3_A Thiamine phosphate pyro 74.6 53 0.0018 30.3 14.5 128 272-425 80-210 (215)
117 1q6o_A Humps, 3-keto-L-gulonat 74.2 16 0.00056 34.5 10.0 136 272-425 74-211 (216)
118 2y88_A Phosphoribosyl isomeras 74.1 17 0.00059 34.6 10.3 122 266-405 84-225 (244)
119 1wa3_A 2-keto-3-deoxy-6-phosph 73.7 23 0.00078 32.9 10.8 99 272-405 29-131 (205)
120 1n7k_A Deoxyribose-phosphate a 73.1 19 0.00063 35.4 10.2 140 261-425 31-191 (234)
121 1vzw_A Phosphoribosyl isomeras 73.0 21 0.00072 34.1 10.6 119 266-406 85-223 (244)
122 3vnd_A TSA, tryptophan synthas 72.9 10 0.00034 37.9 8.4 90 268-368 35-152 (267)
123 2wkj_A N-acetylneuraminate lya 72.5 21 0.00071 36.0 10.8 97 269-370 36-144 (303)
124 2cu0_A Inosine-5'-monophosphat 72.4 41 0.0014 36.0 13.7 119 268-406 230-358 (486)
125 3tha_A Tryptophan synthase alp 72.1 17 0.00057 36.1 9.7 117 269-405 107-227 (252)
126 1w8s_A FBP aldolase, fructose- 71.7 23 0.0008 34.9 10.7 119 264-405 39-179 (263)
127 1vs1_A 3-deoxy-7-phosphoheptul 71.5 53 0.0018 32.8 13.4 127 269-420 56-196 (276)
128 3l5l_A Xenobiotic reductase A; 71.3 24 0.00082 36.5 11.2 132 262-405 147-325 (363)
129 2v82_A 2-dehydro-3-deoxy-6-pho 71.3 35 0.0012 31.8 11.5 101 270-404 24-127 (212)
130 3daq_A DHDPS, dihydrodipicolin 71.3 20 0.00069 35.9 10.3 97 269-370 27-134 (292)
131 3glc_A Aldolase LSRF; TIM barr 70.7 26 0.00088 35.5 11.0 153 319-501 71-230 (295)
132 2tps_A Protein (thiamin phosph 70.0 59 0.002 30.4 12.9 127 272-425 88-220 (227)
133 2ehh_A DHDPS, dihydrodipicolin 69.2 23 0.00079 35.5 10.2 97 269-370 25-132 (294)
134 2yxg_A DHDPS, dihydrodipicolin 68.8 25 0.00084 35.2 10.3 97 269-370 25-132 (289)
135 1xky_A Dihydrodipicolinate syn 68.6 21 0.00071 36.0 9.8 97 269-370 37-144 (301)
136 1rpx_A Protein (ribulose-phosp 68.5 29 0.00098 32.9 10.3 112 268-405 26-147 (230)
137 2nv1_A Pyridoxal biosynthesis 68.1 1E+02 0.0034 30.7 14.9 125 268-424 31-170 (305)
138 2r8w_A AGR_C_1641P; APC7498, d 68.0 23 0.0008 36.2 10.1 97 269-370 59-166 (332)
139 3fkr_A L-2-keto-3-deoxyarabona 68.0 16 0.00054 37.1 8.7 98 269-370 33-143 (309)
140 1vcv_A Probable deoxyribose-ph 67.4 3.5 0.00012 40.4 3.5 144 261-428 12-181 (226)
141 2rfg_A Dihydrodipicolinate syn 67.4 21 0.00071 36.0 9.4 97 269-370 25-132 (297)
142 1f6k_A N-acetylneuraminate lya 67.2 36 0.0012 34.0 11.2 97 269-370 28-136 (293)
143 1vr6_A Phospho-2-dehydro-3-deo 67.2 45 0.0015 34.6 12.0 111 269-404 124-246 (350)
144 1ep3_A Dihydroorotate dehydrog 66.7 11 0.00039 37.4 7.3 115 277-407 124-272 (311)
145 3qze_A DHDPS, dihydrodipicolin 66.0 23 0.00079 36.0 9.5 97 269-370 48-155 (314)
146 3ovp_A Ribulose-phosphate 3-ep 65.8 59 0.002 31.3 12.0 118 269-412 21-149 (228)
147 3cpr_A Dihydrodipicolinate syn 65.5 34 0.0012 34.4 10.6 97 269-370 41-148 (304)
148 2gjl_A Hypothetical protein PA 65.3 89 0.0031 31.3 13.8 116 267-409 28-149 (328)
149 2w6r_A Imidazole glycerol phos 65.2 41 0.0014 32.5 10.9 132 266-414 84-238 (266)
150 1wa3_A 2-keto-3-deoxy-6-phosph 65.2 85 0.0029 28.9 12.8 123 267-424 72-199 (205)
151 1ujp_A Tryptophan synthase alp 65.0 19 0.00064 35.9 8.5 118 269-405 110-229 (271)
152 1wv2_A Thiazole moeity, thiazo 65.0 1.2E+02 0.004 30.4 15.5 133 272-425 94-236 (265)
153 1o5k_A DHDPS, dihydrodipicolin 65.0 22 0.00075 35.9 9.1 97 269-370 37-144 (306)
154 3cqj_A L-ribulose-5-phosphate 64.7 63 0.0021 31.2 12.2 120 268-395 33-186 (295)
155 1w8s_A FBP aldolase, fructose- 64.4 12 0.00042 37.0 6.9 69 271-342 165-237 (263)
156 4fxs_A Inosine-5'-monophosphat 64.4 10 0.00036 41.1 6.9 51 90-140 219-269 (496)
157 3inp_A D-ribulose-phosphate 3- 64.2 65 0.0022 31.6 12.1 116 269-411 44-170 (246)
158 2gou_A Oxidoreductase, FMN-bin 64.2 44 0.0015 34.6 11.4 120 262-405 150-322 (365)
159 1rd5_A Tryptophan synthase alp 64.1 32 0.0011 33.5 9.9 114 274-405 114-230 (262)
160 3lab_A Putative KDPG (2-keto-3 63.9 16 0.00056 35.4 7.5 108 266-406 25-140 (217)
161 1xm3_A Thiazole biosynthesis p 63.5 80 0.0027 30.9 12.7 92 322-429 139-231 (264)
162 2vc6_A MOSA, dihydrodipicolina 63.2 28 0.00096 34.8 9.4 97 269-370 25-132 (292)
163 3m5v_A DHDPS, dihydrodipicolin 62.9 28 0.00097 35.0 9.5 97 269-370 32-140 (301)
164 3l21_A DHDPS, dihydrodipicolin 62.7 21 0.0007 36.1 8.4 97 269-370 40-147 (304)
165 1vc4_A Indole-3-glycerol phosp 62.6 35 0.0012 33.5 9.8 132 267-421 117-252 (254)
166 3b0p_A TRNA-dihydrouridine syn 62.1 37 0.0013 34.9 10.3 121 269-405 74-225 (350)
167 2ojp_A DHDPS, dihydrodipicolin 62.1 20 0.0007 35.8 8.2 97 269-370 26-133 (292)
168 2v9d_A YAGE; dihydrodipicolini 62.1 26 0.00087 36.1 9.1 97 269-370 56-163 (343)
169 3s5o_A 4-hydroxy-2-oxoglutarat 62.0 30 0.001 34.9 9.4 99 269-370 39-148 (307)
170 1p1x_A Deoxyribose-phosphate a 61.1 9.7 0.00033 38.0 5.5 148 261-427 23-192 (260)
171 3si9_A DHDPS, dihydrodipicolin 61.0 25 0.00086 35.7 8.7 97 269-370 47-154 (315)
172 1vyr_A Pentaerythritol tetrani 60.5 1.2E+02 0.0041 31.2 14.0 124 262-405 150-323 (364)
173 3gr7_A NADPH dehydrogenase; fl 60.3 59 0.002 33.3 11.4 129 262-405 133-307 (340)
174 2czd_A Orotidine 5'-phosphate 60.2 46 0.0016 31.2 9.9 127 268-424 68-204 (208)
175 1vzw_A Phosphoribosyl isomeras 60.1 14 0.00049 35.3 6.4 128 267-413 33-174 (244)
176 1z41_A YQJM, probable NADH-dep 59.9 39 0.0013 34.4 10.0 128 262-405 133-307 (338)
177 3kru_A NADH:flavin oxidoreduct 59.9 59 0.002 33.4 11.4 131 262-405 132-307 (343)
178 3tak_A DHDPS, dihydrodipicolin 59.5 37 0.0013 33.9 9.6 97 269-370 26-133 (291)
179 3e96_A Dihydrodipicolinate syn 59.4 31 0.001 35.0 9.0 98 269-371 37-144 (316)
180 3f4w_A Putative hexulose 6 pho 59.1 20 0.00068 33.4 7.1 105 275-405 22-134 (211)
181 4fo4_A Inosine 5'-monophosphat 58.8 17 0.00057 38.0 7.0 49 91-139 97-145 (366)
182 1tv5_A Dhodehase, dihydroorota 58.4 70 0.0024 34.2 11.9 88 307-406 296-403 (443)
183 3qja_A IGPS, indole-3-glycerol 58.2 37 0.0013 33.8 9.2 109 266-406 72-190 (272)
184 2nx9_A Oxaloacetate decarboxyl 58.0 1.1E+02 0.0036 33.0 13.3 152 262-428 26-200 (464)
185 3dz1_A Dihydrodipicolinate syn 57.8 58 0.002 32.9 10.8 96 269-370 33-140 (313)
186 3flu_A DHDPS, dihydrodipicolin 57.7 42 0.0014 33.6 9.6 97 269-370 32-139 (297)
187 3bo9_A Putative nitroalkan dio 56.9 1.7E+02 0.0057 29.5 15.5 114 266-407 38-153 (326)
188 1p0k_A Isopentenyl-diphosphate 56.5 59 0.002 33.0 10.7 31 364-406 251-281 (349)
189 3sz8_A 2-dehydro-3-deoxyphosph 56.4 62 0.0021 32.6 10.5 109 276-409 49-172 (285)
190 3tml_A 2-dehydro-3-deoxyphosph 56.2 81 0.0028 31.8 11.3 110 275-409 45-175 (288)
191 3ivs_A Homocitrate synthase, m 55.5 2.1E+02 0.0071 30.3 15.0 153 262-426 57-220 (423)
192 3rcm_A TATD family hydrolase; 55.3 53 0.0018 32.8 9.8 101 266-369 17-132 (287)
193 3zwt_A Dihydroorotate dehydrog 55.3 59 0.002 33.8 10.5 131 264-406 159-328 (367)
194 3khj_A Inosine-5-monophosphate 55.2 16 0.00055 38.0 6.2 46 92-139 97-142 (361)
195 3fs2_A 2-dehydro-3-deoxyphosph 55.1 81 0.0028 32.0 11.2 108 276-408 70-192 (298)
196 3igs_A N-acetylmannosamine-6-p 55.1 89 0.003 30.1 11.2 111 264-404 34-155 (232)
197 1eep_A Inosine 5'-monophosphat 55.0 18 0.00063 37.8 6.7 50 91-140 142-191 (404)
198 3na8_A Putative dihydrodipicol 54.9 36 0.0012 34.5 8.7 97 269-370 49-156 (315)
199 3exr_A RMPD (hexulose-6-phosph 54.8 76 0.0026 30.3 10.5 137 274-425 78-216 (221)
200 3a5f_A Dihydrodipicolinate syn 54.8 21 0.00073 35.6 6.9 97 269-370 26-133 (291)
201 1thf_D HISF protein; thermophI 54.6 53 0.0018 31.3 9.5 68 267-340 31-107 (253)
202 1mzh_A Deoxyribose-phosphate a 54.6 1.1E+02 0.0037 29.3 11.6 143 261-422 15-169 (225)
203 3qfe_A Putative dihydrodipicol 54.2 41 0.0014 34.1 8.9 98 269-370 36-145 (318)
204 1kbi_A Cytochrome B2, L-LCR; f 54.1 47 0.0016 36.1 9.9 95 289-406 331-433 (511)
205 1rd5_A Tryptophan synthase alp 53.9 1.5E+02 0.0053 28.5 12.8 90 268-369 35-148 (262)
206 3q58_A N-acetylmannosamine-6-p 53.6 87 0.003 30.1 10.8 110 264-403 34-154 (229)
207 1at0_A 17-hedgehog; developmen 53.4 51 0.0017 29.5 8.5 39 200-238 88-133 (145)
208 2nuw_A 2-keto-3-deoxygluconate 53.0 81 0.0028 31.3 10.8 96 269-370 24-129 (288)
209 3o63_A Probable thiamine-phosp 52.7 1.1E+02 0.0037 29.8 11.4 135 269-428 103-242 (243)
210 2z6i_A Trans-2-enoyl-ACP reduc 52.6 1.3E+02 0.0045 30.2 12.5 110 267-406 25-138 (332)
211 3ih1_A Methylisocitrate lyase; 52.6 82 0.0028 32.0 10.8 114 269-405 108-243 (305)
212 2r14_A Morphinone reductase; H 52.1 1.1E+02 0.0038 31.7 12.0 125 262-405 155-328 (377)
213 2uva_G Fatty acid synthase bet 52.0 39 0.0013 43.0 9.9 119 269-404 657-794 (2060)
214 3kts_A Glycerol uptake operon 51.9 8.5 0.00029 36.8 3.1 126 266-407 17-181 (192)
215 2e6f_A Dihydroorotate dehydrog 51.5 23 0.00079 35.4 6.5 125 269-407 110-275 (314)
216 3i65_A Dihydroorotate dehydrog 51.3 57 0.002 34.6 9.7 119 275-405 208-374 (415)
217 2r91_A 2-keto-3-deoxy-(6-phosp 51.1 88 0.003 31.0 10.7 97 268-370 22-128 (286)
218 1ub3_A Aldolase protein; schif 51.1 10 0.00034 36.9 3.5 140 261-425 14-173 (220)
219 2y88_A Phosphoribosyl isomeras 51.0 30 0.001 32.9 7.0 125 269-413 35-177 (244)
220 1s2w_A Phosphoenolpyruvate pho 50.9 1.6E+02 0.0056 29.5 12.7 114 269-405 98-238 (295)
221 2qr6_A IMP dehydrogenase/GMP r 50.9 17 0.00057 37.9 5.5 74 267-344 221-314 (393)
222 3usb_A Inosine-5'-monophosphat 50.7 20 0.00068 39.0 6.2 50 90-139 244-293 (511)
223 3d0c_A Dihydrodipicolinate syn 50.2 1.1E+02 0.0037 30.9 11.3 97 269-370 37-143 (314)
224 3noy_A 4-hydroxy-3-methylbut-2 50.1 2.4E+02 0.0083 29.4 14.0 135 269-424 50-199 (366)
225 1dxe_A 2-dehydro-3-deoxy-galac 50.0 1E+02 0.0036 29.9 10.9 68 267-335 29-97 (256)
226 1w3i_A EDA, 2-keto-3-deoxy glu 49.5 98 0.0033 30.8 10.8 97 268-370 23-129 (293)
227 2k8i_A SLYD, peptidyl-prolyl C 49.3 59 0.002 30.1 8.4 59 172-230 52-118 (171)
228 1yad_A Regulatory protein TENI 48.9 62 0.0021 30.3 8.8 88 267-363 119-215 (221)
229 2nli_A Lactate oxidase; flavoe 48.7 21 0.00071 37.2 5.8 63 267-337 239-314 (368)
230 1ypf_A GMP reductase; GUAC, pu 48.5 29 0.001 35.4 6.8 73 267-344 159-247 (336)
231 1jcn_A Inosine monophosphate d 48.4 21 0.00071 38.6 5.9 50 91-140 244-293 (514)
232 2d73_A Alpha-glucosidase SUSB; 47.9 98 0.0034 35.3 11.4 100 265-369 371-506 (738)
233 3oa3_A Aldolase; structural ge 47.5 15 0.00053 37.2 4.4 146 261-426 69-229 (288)
234 1o66_A 3-methyl-2-oxobutanoate 47.2 2E+02 0.0068 28.8 12.4 129 263-404 22-180 (275)
235 2ztj_A Homocitrate synthase; ( 47.1 2.6E+02 0.0089 28.9 16.3 155 261-427 20-185 (382)
236 4avf_A Inosine-5'-monophosphat 47.1 23 0.00078 38.3 6.0 51 90-140 217-267 (490)
237 3qz6_A HPCH/HPAI aldolase; str 47.0 1E+02 0.0035 30.2 10.3 67 268-335 27-94 (261)
238 3h5d_A DHDPS, dihydrodipicolin 46.6 65 0.0022 32.5 9.0 99 268-370 31-140 (311)
239 3kws_A Putative sugar isomeras 46.3 1.1E+02 0.0037 29.4 10.3 101 266-369 38-164 (287)
240 4adt_A Pyridoxine biosynthetic 45.7 86 0.003 31.6 9.7 121 269-425 32-171 (297)
241 3nav_A Tryptophan synthase alp 45.6 94 0.0032 30.9 9.8 90 268-368 37-154 (271)
242 1o94_A Tmadh, trimethylamine d 45.5 67 0.0023 36.1 9.7 132 262-405 138-321 (729)
243 2hmc_A AGR_L_411P, dihydrodipi 45.3 82 0.0028 32.4 9.6 96 269-370 51-157 (344)
244 4ef8_A Dihydroorotate dehydrog 44.9 54 0.0018 34.0 8.2 137 276-432 153-328 (354)
245 3eb2_A Putative dihydrodipicol 44.6 88 0.003 31.3 9.6 97 269-370 29-136 (300)
246 3dx5_A Uncharacterized protein 44.5 1E+02 0.0034 29.4 9.7 37 268-304 18-61 (286)
247 3ctl_A D-allulose-6-phosphate 44.4 2.2E+02 0.0076 27.3 13.4 128 269-424 17-157 (231)
248 2g0w_A LMO2234 protein; putati 44.3 81 0.0028 30.6 9.1 37 268-304 39-81 (296)
249 1qpo_A Quinolinate acid phosph 44.1 27 0.00091 35.2 5.5 64 268-337 204-270 (284)
250 1ko7_A HPR kinase/phosphatase; 43.8 26 0.0009 35.8 5.5 86 306-412 48-157 (314)
251 1vli_A Spore coat polysacchari 43.6 88 0.003 32.9 9.5 63 330-415 135-199 (385)
252 1o60_A 2-dehydro-3-deoxyphosph 42.9 94 0.0032 31.3 9.4 99 291-414 76-175 (292)
253 4af0_A Inosine-5'-monophosphat 42.7 19 0.00064 39.7 4.4 50 91-140 270-319 (556)
254 4djd_D C/Fe-SP, corrinoid/iron 42.7 68 0.0023 32.9 8.4 148 265-426 141-315 (323)
255 1h5y_A HISF; histidine biosynt 42.7 54 0.0019 30.8 7.3 84 268-367 157-251 (253)
256 2f6u_A GGGPS, (S)-3-O-geranylg 42.4 39 0.0013 33.0 6.3 57 91-150 8-66 (234)
257 2kfw_A FKBP-type peptidyl-prol 42.0 27 0.00094 33.2 5.0 59 172-230 52-118 (196)
258 1o4u_A Type II quinolic acid p 41.9 23 0.00078 35.8 4.6 65 267-337 202-269 (285)
259 4dbe_A Orotidine 5'-phosphate 41.8 22 0.00074 34.4 4.3 85 268-359 125-210 (222)
260 3ngj_A Deoxyribose-phosphate a 41.5 28 0.00097 34.2 5.1 145 260-425 37-197 (239)
261 3oix_A Putative dihydroorotate 41.5 76 0.0026 32.7 8.6 138 276-432 152-326 (345)
262 3grc_A Sensor protein, kinase; 41.2 1.5E+02 0.0051 24.4 9.5 75 463-539 42-125 (140)
263 1nsj_A PRAI, phosphoribosyl an 41.2 1.6E+02 0.0053 27.9 10.2 113 266-408 10-129 (205)
264 1tqj_A Ribulose-phosphate 3-ep 41.1 1.5E+02 0.0053 28.2 10.3 131 269-425 21-164 (230)
265 3vav_A 3-methyl-2-oxobutanoate 41.0 2.9E+02 0.0098 27.6 13.5 94 262-369 33-147 (275)
266 3dwg_A Cysteine synthase B; su 40.9 1.2E+02 0.0042 30.3 10.1 125 353-504 85-214 (325)
267 2q02_A Putative cytoplasmic pr 40.9 2.2E+02 0.0075 26.6 11.4 37 268-304 22-64 (272)
268 1viz_A PCRB protein homolog; s 40.7 40 0.0014 33.1 6.1 58 90-150 7-66 (240)
269 1gox_A (S)-2-hydroxy-acid oxid 40.5 34 0.0012 35.4 5.9 65 267-337 235-310 (370)
270 3hgm_A Universal stress protei 40.4 32 0.0011 29.2 4.9 41 459-500 98-147 (147)
271 3cgm_A SLYD, peptidyl-prolyl C 40.1 1.1E+02 0.0038 27.8 8.6 59 172-230 47-114 (158)
272 1mdl_A Mandelate racemase; iso 40.0 59 0.002 33.1 7.5 60 90-154 133-196 (359)
273 3o1n_A 3-dehydroquinate dehydr 40.0 81 0.0028 31.4 8.3 138 268-426 122-274 (276)
274 3nhm_A Response regulator; pro 40.0 1.1E+02 0.0039 24.8 8.2 66 464-530 40-112 (133)
275 2qkf_A 3-deoxy-D-manno-octulos 39.9 1.2E+02 0.0041 30.2 9.6 90 291-405 73-163 (280)
276 2c6q_A GMP reductase 2; TIM ba 39.8 96 0.0033 31.9 9.1 71 267-342 171-258 (351)
277 1icp_A OPR1, 12-oxophytodienoa 39.7 92 0.0031 32.3 9.0 23 262-284 156-186 (376)
278 3f2b_A DNA-directed DNA polyme 39.5 1.3E+02 0.0043 35.8 10.9 127 268-399 135-351 (1041)
279 3l6b_A Serine racemase; pyrido 39.4 2E+02 0.007 29.0 11.5 120 354-504 89-213 (346)
280 3sr7_A Isopentenyl-diphosphate 39.4 94 0.0032 32.3 9.0 122 265-405 154-307 (365)
281 1i60_A IOLI protein; beta barr 39.3 97 0.0033 29.2 8.6 37 268-304 17-59 (278)
282 1x1o_A Nicotinate-nucleotide p 39.1 51 0.0018 33.1 6.7 64 265-337 203-269 (286)
283 1f76_A Dihydroorotate dehydrog 39.0 3E+02 0.01 27.4 13.9 65 330-408 166-248 (336)
284 3r12_A Deoxyribose-phosphate a 39.0 30 0.001 34.5 4.9 146 261-425 54-213 (260)
285 3eoo_A Methylisocitrate lyase; 38.9 2.9E+02 0.0098 27.8 12.3 113 271-405 104-239 (298)
286 3ndz_A Endoglucanase D; cellot 38.8 63 0.0022 32.8 7.5 60 98-157 39-106 (345)
287 3m5v_A DHDPS, dihydrodipicolin 38.6 1.1E+02 0.0037 30.6 9.1 88 330-429 42-134 (301)
288 3iwp_A Copper homeostasis prot 38.6 2.8E+02 0.0097 27.8 12.0 140 266-428 47-206 (287)
289 2z08_A Universal stress protei 38.5 50 0.0017 27.8 5.8 41 459-500 87-136 (137)
290 1y0e_A Putative N-acetylmannos 38.0 2.5E+02 0.0084 26.0 14.5 106 269-405 27-146 (223)
291 2nzl_A Hydroxyacid oxidase 1; 38.0 37 0.0013 35.6 5.7 63 267-337 262-337 (392)
292 2hjp_A Phosphonopyruvate hydro 37.9 3.2E+02 0.011 27.3 13.1 113 269-404 94-234 (290)
293 2gdq_A YITF; mandelate racemas 37.6 1.1E+02 0.0036 31.6 9.1 63 90-155 123-192 (382)
294 4e7p_A Response regulator; DNA 37.4 1.2E+02 0.0041 25.5 8.2 75 463-540 58-139 (150)
295 4dt4_A FKBP-type 16 kDa peptid 37.4 1.2E+02 0.0041 28.0 8.5 60 172-231 75-143 (169)
296 3tnj_A Universal stress protei 37.2 39 0.0013 28.9 4.9 44 459-503 97-148 (150)
297 3ve9_A Orotidine-5'-phosphate 37.1 20 0.00069 34.5 3.2 82 268-356 118-200 (215)
298 1qo2_A Molecule: N-((5-phospho 37.0 53 0.0018 31.3 6.3 132 266-416 83-234 (241)
299 1vrd_A Inosine-5'-monophosphat 36.9 37 0.0013 36.3 5.7 48 93-140 228-275 (494)
300 1zlp_A PSR132, petal death pro 36.6 2.1E+02 0.0073 29.1 11.0 116 269-405 120-257 (318)
301 3a24_A Alpha-galactosidase; gl 36.3 1.2E+02 0.0042 33.9 9.8 96 265-369 309-423 (641)
302 3icg_A Endoglucanase D; cellul 36.3 69 0.0024 34.4 7.7 57 101-157 45-109 (515)
303 3tbh_A O-acetyl serine sulfhyd 36.2 1.4E+02 0.0047 30.1 9.6 125 353-504 84-214 (334)
304 1tdj_A Biosynthetic threonine 36.1 3.5E+02 0.012 29.3 13.2 118 355-503 93-215 (514)
305 2qv0_A Protein MRKE; structura 36.1 1.4E+02 0.0048 24.6 8.3 76 465-541 49-131 (143)
306 2htm_A Thiazole biosynthesis p 36.1 1.9E+02 0.0066 28.8 10.2 81 330-425 146-227 (268)
307 1to3_A Putative aldolase YIHT; 36.1 48 0.0016 33.5 6.0 78 271-348 183-266 (304)
308 3bdk_A D-mannonate dehydratase 35.8 25 0.00084 37.0 3.9 87 264-370 29-123 (386)
309 1ve1_A O-acetylserine sulfhydr 35.8 1.8E+02 0.006 28.7 10.1 122 355-505 76-204 (304)
310 3lye_A Oxaloacetate acetyl hyd 35.7 1.6E+02 0.0053 30.0 9.7 78 306-404 161-246 (307)
311 2gn0_A Threonine dehydratase c 35.6 2.4E+02 0.0083 28.3 11.4 119 354-503 101-224 (342)
312 1zzm_A Putative deoxyribonucle 35.3 1.7E+02 0.0059 27.5 9.7 99 269-370 23-133 (259)
313 3pc3_A CG1753, isoform A; CBS, 35.2 1.2E+02 0.0042 32.5 9.5 128 354-505 126-259 (527)
314 1yx1_A Hypothetical protein PA 35.2 92 0.0031 29.6 7.7 35 269-304 27-64 (264)
315 1to3_A Putative aldolase YIHT; 35.1 3.5E+02 0.012 27.0 14.3 140 270-428 113-289 (304)
316 2ovl_A Putative racemase; stru 35.1 61 0.0021 33.2 6.7 62 90-154 133-198 (371)
317 3fok_A Uncharacterized protein 35.1 2.7E+02 0.0092 28.3 11.2 127 270-425 133-295 (307)
318 1mjh_A Protein (ATP-binding do 35.0 67 0.0023 27.8 6.1 44 459-503 108-160 (162)
319 1p5j_A L-serine dehydratase; l 34.8 2.6E+02 0.0089 28.6 11.5 120 355-504 107-233 (372)
320 2xio_A Putative deoxyribonucle 34.6 76 0.0026 31.3 7.2 102 266-370 27-146 (301)
321 3ffs_A Inosine-5-monophosphate 34.4 35 0.0012 36.1 4.8 43 95-139 139-181 (400)
322 3stp_A Galactonate dehydratase 34.3 61 0.0021 34.1 6.7 66 89-155 166-238 (412)
323 3cwo_X Beta/alpha-barrel prote 34.3 2.2E+02 0.0077 25.7 10.0 125 268-414 65-212 (237)
324 1tvn_A Cellulase, endoglucanas 34.3 58 0.002 31.8 6.2 53 102-156 39-101 (293)
325 4a29_A Engineered retro-aldol 34.2 49 0.0017 33.0 5.5 63 266-336 161-233 (258)
326 2nli_A Lactate oxidase; flavoe 34.2 1E+02 0.0035 31.8 8.3 95 289-406 217-314 (368)
327 3nbm_A PTS system, lactose-spe 34.1 16 0.00055 31.4 1.8 62 292-369 22-83 (108)
328 3ngf_A AP endonuclease, family 34.1 1.3E+02 0.0046 28.5 8.7 39 265-304 22-61 (269)
329 2nv1_A Pyridoxal biosynthesis 34.1 45 0.0015 33.3 5.4 139 268-425 90-258 (305)
330 1vhy_A Hypothetical protein HI 34.0 1.5E+02 0.005 29.1 9.0 72 204-283 36-110 (257)
331 1xg4_A Probable methylisocitra 34.0 3.7E+02 0.013 26.9 13.7 115 268-406 97-236 (295)
332 3eod_A Protein HNR; response r 33.9 74 0.0025 26.0 6.0 76 463-539 43-124 (130)
333 4dpp_A DHDPS 2, dihydrodipicol 33.8 91 0.0031 32.4 7.8 95 269-370 84-189 (360)
334 2qdd_A Mandelate racemase/muco 33.7 1.3E+02 0.0044 30.8 9.0 61 89-154 133-197 (378)
335 3sgz_A Hydroxyacid oxidase 2; 33.7 56 0.0019 33.9 6.1 66 267-338 227-303 (352)
336 1rqb_A Transcarboxylase 5S sub 33.6 3.6E+02 0.012 29.5 12.8 152 262-428 43-217 (539)
337 3tfx_A Orotidine 5'-phosphate 33.5 48 0.0016 32.9 5.4 68 271-345 150-225 (259)
338 3sgz_A Hydroxyacid oxidase 2; 33.5 96 0.0033 32.1 7.8 31 364-406 272-302 (352)
339 1aj0_A DHPS, dihydropteroate s 33.3 1.2E+02 0.004 30.4 8.2 52 105-158 42-101 (282)
340 1k77_A EC1530, hypothetical pr 33.3 1.9E+02 0.0064 27.0 9.5 35 269-304 19-53 (260)
341 3qc0_A Sugar isomerase; TIM ba 33.2 2.9E+02 0.0098 25.8 10.9 127 268-397 21-170 (275)
342 2kr7_A FKBP-type peptidyl-prol 33.0 1.6E+02 0.0055 26.3 8.5 60 172-231 57-124 (151)
343 2zbt_A Pyridoxal biosynthesis 32.9 1.3E+02 0.0045 29.6 8.6 138 268-426 90-259 (297)
344 3tdn_A FLR symmetric alpha-bet 32.9 21 0.00072 34.4 2.6 35 266-300 89-125 (247)
345 1vc4_A Indole-3-glycerol phosp 32.8 85 0.0029 30.7 7.1 67 266-337 162-237 (254)
346 3ddy_A Lumazine protein, LUMP; 32.8 87 0.003 29.5 6.8 55 192-249 23-85 (186)
347 1ub3_A Aldolase protein; schif 32.7 1.4E+02 0.0047 28.7 8.4 103 364-484 52-157 (220)
348 2zbt_A Pyridoxal biosynthesis 32.5 1.5E+02 0.0051 29.2 8.9 124 268-425 31-171 (297)
349 2aam_A Hypothetical protein TM 32.4 98 0.0033 31.4 7.6 94 270-370 127-246 (309)
350 3ceu_A Thiamine phosphate pyro 32.3 1.1E+02 0.0036 28.7 7.4 97 268-406 16-115 (210)
351 1egz_A Endoglucanase Z, EGZ, C 32.1 56 0.0019 31.8 5.6 52 102-155 39-98 (291)
352 1yxy_A Putative N-acetylmannos 32.1 3.2E+02 0.011 25.5 11.1 109 267-406 37-163 (234)
353 1tq8_A Hypothetical protein RV 32.0 68 0.0023 28.3 5.8 44 459-503 107-159 (163)
354 3l5a_A NADH/flavin oxidoreduct 31.9 2.4E+02 0.0083 29.6 10.9 130 262-405 159-346 (419)
355 1rvk_A Isomerase/lactonizing e 31.8 95 0.0032 31.8 7.6 46 106-154 156-207 (382)
356 2yzr_A Pyridoxal biosynthesis 31.8 4.4E+02 0.015 27.0 13.8 130 268-430 27-172 (330)
357 3kht_A Response regulator; PSI 31.7 2.2E+02 0.0074 23.5 10.0 75 463-538 43-129 (144)
358 2p10_A MLL9387 protein; putati 31.6 2.2E+02 0.0075 28.7 9.8 117 271-405 114-259 (286)
359 3h8v_A Ubiquitin-like modifier 31.6 1.2E+02 0.0042 30.4 8.1 68 292-370 90-168 (292)
360 1j0a_A 1-aminocyclopropane-1-c 31.5 1.5E+02 0.005 29.6 8.8 126 354-503 85-217 (325)
361 3flu_A DHDPS, dihydrodipicolin 31.5 2.2E+02 0.0076 28.2 10.1 88 330-429 42-133 (297)
362 3i42_A Response regulator rece 31.4 66 0.0023 26.1 5.2 62 463-524 39-107 (127)
363 1kzl_A Riboflavin synthase; bi 31.3 53 0.0018 31.7 5.1 55 193-249 25-86 (208)
364 3gka_A N-ethylmaleimide reduct 31.3 3.1E+02 0.01 28.2 11.3 114 262-405 150-316 (361)
365 1nu5_A Chloromuconate cycloiso 31.3 79 0.0027 32.2 6.8 46 106-154 149-195 (370)
366 1edg_A Endoglucanase A; family 31.3 81 0.0028 32.1 6.9 58 98-157 58-124 (380)
367 1z7w_A Cysteine synthase; tran 31.2 2.5E+02 0.0085 27.8 10.4 124 355-505 81-210 (322)
368 2qr3_A Two-component system re 31.1 2.1E+02 0.0072 23.2 8.5 75 464-540 40-125 (140)
369 1tkk_A Similar to chloromucona 30.5 95 0.0032 31.6 7.3 46 106-154 147-192 (366)
370 2b7n_A Probable nicotinate-nuc 30.5 73 0.0025 31.6 6.2 65 267-337 191-258 (273)
371 3l55_A B-1,4-endoglucanase/cel 30.4 81 0.0028 32.3 6.7 57 98-156 49-113 (353)
372 3f6c_A Positive transcription 30.3 2E+02 0.0069 23.2 8.2 73 467-542 42-121 (134)
373 3qze_A DHDPS, dihydrodipicolin 30.3 1.9E+02 0.0065 29.1 9.4 88 330-429 58-149 (314)
374 3gg7_A Uncharacterized metallo 30.2 80 0.0027 30.9 6.3 93 267-369 15-123 (254)
375 1jmv_A USPA, universal stress 30.1 84 0.0029 26.4 5.8 44 459-503 90-139 (141)
376 2v5j_A 2,4-dihydroxyhept-2-ENE 30.1 1.6E+02 0.0055 29.3 8.7 69 266-335 48-117 (287)
377 2fli_A Ribulose-phosphate 3-ep 30.1 1.5E+02 0.0052 27.4 8.1 109 268-404 19-137 (220)
378 2yci_X 5-methyltetrahydrofolat 30.0 82 0.0028 31.3 6.5 52 104-157 37-88 (271)
379 3dxi_A Putative aldolase; TIM 30.0 3.9E+02 0.013 27.0 11.7 144 262-426 20-183 (320)
380 1jw9_B Molybdopterin biosynthe 30.0 1.5E+02 0.0051 28.5 8.3 66 293-370 87-152 (249)
381 3fdx_A Putative filament prote 29.8 76 0.0026 26.6 5.5 41 459-500 94-142 (143)
382 3lmz_A Putative sugar isomeras 29.8 3.2E+02 0.011 25.5 10.5 90 268-369 33-131 (257)
383 3eul_A Possible nitrate/nitrit 29.7 2E+02 0.007 24.0 8.4 76 465-542 55-136 (152)
384 3s3t_A Nucleotide-binding prot 29.6 73 0.0025 26.9 5.4 41 459-500 95-145 (146)
385 3ndo_A Deoxyribose-phosphate a 29.5 3E+02 0.01 26.7 10.2 108 363-484 60-170 (231)
386 4e8b_A Ribosomal RNA small sub 29.4 1.3E+02 0.0045 29.3 7.8 73 204-284 34-109 (251)
387 3ajx_A 3-hexulose-6-phosphate 29.4 3.2E+02 0.011 24.8 11.7 116 275-416 22-148 (207)
388 3ipw_A Hydrolase TATD family p 29.4 52 0.0018 33.6 5.0 105 265-370 51-174 (325)
389 2dum_A Hypothetical protein PH 29.2 82 0.0028 27.5 5.8 44 459-503 105-157 (170)
390 1tzz_A Hypothetical protein L1 29.2 1E+02 0.0035 31.7 7.3 63 90-155 150-218 (392)
391 3iwp_A Copper homeostasis prot 29.1 4E+02 0.014 26.7 11.3 121 269-408 115-241 (287)
392 2oz8_A MLL7089 protein; struct 29.1 88 0.003 32.3 6.8 62 90-154 132-197 (389)
393 3b2n_A Uncharacterized protein 29.0 1.9E+02 0.0064 23.7 7.8 72 465-539 43-121 (133)
394 3ayr_A Endoglucanase; TIM barr 28.9 1.3E+02 0.0043 30.7 7.9 56 101-156 62-125 (376)
395 3r2g_A Inosine 5'-monophosphat 28.7 46 0.0016 34.6 4.5 46 95-140 93-138 (361)
396 3tfx_A Orotidine 5'-phosphate 28.7 2.4E+02 0.0084 27.7 9.6 136 272-430 77-241 (259)
397 2kct_A Cytochrome C-type bioge 28.5 1.4E+02 0.0049 25.0 6.7 57 155-212 7-65 (94)
398 3tsm_A IGPS, indole-3-glycerol 28.5 4.2E+02 0.014 26.1 11.4 108 266-405 79-196 (272)
399 1zco_A 2-dehydro-3-deoxyphosph 28.5 1.6E+02 0.0053 29.1 8.1 127 257-404 85-226 (262)
400 3a10_A Response regulator; pho 28.5 2.1E+02 0.0073 22.4 8.3 60 465-525 39-103 (116)
401 1i8d_A Riboflavin synthase; ri 28.4 79 0.0027 30.5 5.8 55 193-249 24-86 (213)
402 1oy0_A Ketopantoate hydroxymet 28.4 4.6E+02 0.016 26.2 12.2 129 263-404 39-198 (281)
403 3ldv_A Orotidine 5'-phosphate 28.3 38 0.0013 33.5 3.6 66 272-346 169-244 (255)
404 4dwd_A Mandelate racemase/muco 28.3 1.4E+02 0.0048 30.9 8.2 64 89-155 124-199 (393)
405 4aec_A Cysteine synthase, mito 28.2 1.9E+02 0.0065 30.6 9.2 124 354-504 188-317 (430)
406 3ndo_A Deoxyribose-phosphate a 28.0 50 0.0017 32.3 4.3 147 261-425 24-187 (231)
407 3pfn_A NAD kinase; structural 28.0 25 0.00085 36.8 2.3 35 469-503 244-282 (365)
408 1y7l_A O-acetylserine sulfhydr 27.9 2.7E+02 0.0094 27.4 10.1 124 355-504 76-206 (316)
409 4a3u_A NCR, NADH\:flavin oxido 27.9 2E+02 0.0069 29.4 9.2 23 262-284 141-171 (358)
410 2yr1_A 3-dehydroquinate dehydr 27.9 3.1E+02 0.011 26.7 10.3 143 262-424 96-251 (257)
411 3loq_A Universal stress protei 27.8 2.5E+02 0.0086 26.8 9.6 80 466-557 118-208 (294)
412 1i4n_A Indole-3-glycerol phosp 27.7 47 0.0016 32.8 4.1 66 266-336 158-230 (251)
413 2hk0_A D-psicose 3-epimerase; 27.7 1.9E+02 0.0064 28.0 8.7 39 266-304 37-79 (309)
414 1vcf_A Isopentenyl-diphosphate 27.6 73 0.0025 32.2 5.7 32 364-407 256-287 (332)
415 1zud_1 Adenylyltransferase THI 27.5 1.8E+02 0.006 28.1 8.3 67 292-370 83-149 (251)
416 2pqm_A Cysteine synthase; OASS 27.5 2.5E+02 0.0087 28.2 9.8 124 355-505 92-221 (343)
417 4h27_A L-serine dehydratase/L- 27.4 2.4E+02 0.0082 28.7 9.7 120 354-503 106-232 (364)
418 1ve5_A Threonine deaminase; ri 27.4 2.3E+02 0.0079 27.9 9.3 119 355-504 79-206 (311)
419 3olq_A Universal stress protei 27.2 1.6E+02 0.0054 28.5 8.0 88 459-558 99-204 (319)
420 2qul_A D-tagatose 3-epimerase; 27.1 1.4E+02 0.0049 28.2 7.6 36 269-304 21-60 (290)
421 1vhk_A Hypothetical protein YQ 26.9 1.6E+02 0.0053 29.1 7.9 72 204-283 37-111 (268)
422 2nzl_A Hydroxyacid oxidase 1; 26.9 99 0.0034 32.3 6.7 96 289-406 240-337 (392)
423 4f3y_A DHPR, dihydrodipicolina 26.8 2.4E+02 0.0081 27.8 9.2 84 321-432 65-148 (272)
424 3jte_A Response regulator rece 26.7 2.6E+02 0.009 22.8 8.8 55 469-524 47-108 (143)
425 2egu_A Cysteine synthase; O-ac 26.6 2.1E+02 0.0071 28.2 8.9 123 355-505 79-207 (308)
426 3ngj_A Deoxyribose-phosphate a 26.6 3.8E+02 0.013 26.1 10.4 139 313-484 38-181 (239)
427 1ps9_A 2,4-dienoyl-COA reducta 26.5 2.2E+02 0.0074 31.4 9.8 133 262-406 130-311 (671)
428 3ozy_A Putative mandelate race 26.4 2.1E+02 0.0071 29.5 9.1 50 313-369 252-303 (389)
429 2ehh_A DHDPS, dihydrodipicolin 26.3 3.5E+02 0.012 26.6 10.5 94 324-429 28-126 (294)
430 1h1n_A Endo type cellulase ENG 26.2 52 0.0018 32.5 4.2 21 103-123 33-53 (305)
431 3h5i_A Response regulator/sens 26.1 1.8E+02 0.0063 24.0 7.3 69 470-539 49-126 (140)
432 3kw2_A Probable R-RNA methyltr 26.0 1.5E+02 0.0051 29.2 7.4 73 204-283 33-108 (257)
433 4adt_A Pyridoxine biosynthetic 25.9 1.2E+02 0.0043 30.5 7.0 137 268-426 90-259 (297)
434 3cny_A Inositol catabolism pro 25.8 1.9E+02 0.0064 27.6 8.1 34 269-304 35-68 (301)
435 1v71_A Serine racemase, hypoth 25.7 2.6E+02 0.0089 27.7 9.4 120 354-504 87-211 (323)
436 2wkj_A N-acetylneuraminate lya 25.7 3.2E+02 0.011 27.1 10.1 94 324-429 39-137 (303)
437 1o58_A O-acetylserine sulfhydr 25.7 2.4E+02 0.0082 27.7 9.1 123 355-505 79-208 (303)
438 1y8q_A Ubiquitin-like 1 activa 25.6 1.5E+02 0.005 30.3 7.6 66 292-370 91-156 (346)
439 3fg9_A Protein of universal st 25.6 72 0.0025 27.4 4.6 41 459-500 106-155 (156)
440 2hnh_A DNA polymerase III alph 25.6 3E+02 0.01 32.1 10.9 125 268-399 25-223 (910)
441 4d9a_A 2-pyrone-4,6-dicarbaxyl 25.5 56 0.0019 32.5 4.3 60 90-152 96-157 (303)
442 3hzh_A Chemotaxis response reg 25.5 2.1E+02 0.0073 24.2 7.8 53 471-524 83-142 (157)
443 3dwg_A Cysteine synthase B; su 25.5 3.6E+02 0.012 26.9 10.5 86 456-542 53-146 (325)
444 1q77_A Hypothetical protein AQ 25.4 57 0.002 27.4 3.9 41 459-500 97-137 (138)
445 2rkb_A Serine dehydratase-like 25.4 4.3E+02 0.015 25.9 11.0 119 355-504 68-193 (318)
446 3u7r_A NADPH-dependent FMN red 25.4 1E+02 0.0036 28.7 5.9 50 316-370 54-110 (190)
447 2rdx_A Mandelate racemase/muco 25.4 1.2E+02 0.0042 30.9 7.1 59 90-154 134-196 (379)
448 1jbq_A B, cystathionine beta-s 25.3 2.2E+02 0.0074 30.1 9.1 127 355-505 175-307 (435)
449 3hm7_A Allantoinase; metallo-d 25.2 5.5E+02 0.019 26.1 13.4 102 269-371 81-189 (448)
450 1vhn_A Putative flavin oxidore 25.2 1.3E+02 0.0046 30.0 7.1 102 285-406 106-214 (318)
451 3r12_A Deoxyribose-phosphate a 25.2 4.3E+02 0.015 26.1 10.6 102 364-483 92-196 (260)
452 2v03_A Cysteine synthase B; py 25.1 2.9E+02 0.01 27.1 9.6 122 355-504 75-202 (303)
453 3k30_A Histamine dehydrogenase 25.1 60 0.0021 36.1 4.9 132 262-405 145-324 (690)
454 3mt0_A Uncharacterized protein 25.0 3E+02 0.01 26.2 9.5 86 459-558 77-180 (290)
455 2gm3_A Unknown protein; AT3G01 24.9 95 0.0032 27.3 5.4 44 459-503 112-164 (175)
456 1z85_A Hypothetical protein TM 24.9 1.5E+02 0.0053 28.7 7.2 72 204-283 41-115 (234)
457 3fa4_A 2,3-dimethylmalate lyas 24.8 2.9E+02 0.0099 27.9 9.5 87 290-391 138-231 (302)
458 2o55_A Putative glycerophospho 24.8 91 0.0031 30.0 5.6 57 353-425 201-257 (258)
459 3dlo_A Universal stress protei 24.8 1.1E+02 0.0039 26.6 5.8 41 459-500 105-154 (155)
460 4ab4_A Xenobiotic reductase B; 24.7 5.8E+02 0.02 26.1 12.4 118 262-405 142-308 (362)
461 2q3b_A Cysteine synthase A; py 24.7 3.5E+02 0.012 26.6 10.1 122 355-504 81-209 (313)
462 1xi3_A Thiamine phosphate pyro 24.3 1.6E+02 0.0055 26.9 7.1 47 104-152 29-75 (215)
463 3dzv_A 4-methyl-5-(beta-hydrox 24.3 89 0.0031 31.1 5.5 49 320-373 49-97 (273)
464 1m3u_A 3-methyl-2-oxobutanoate 24.2 5.3E+02 0.018 25.5 12.3 129 263-404 22-180 (264)
465 1tv5_A Dhodehase, dihydroorota 24.2 1.1E+02 0.0037 32.7 6.4 74 261-340 306-406 (443)
466 2oog_A Glycerophosphoryl diest 24.2 4.2E+02 0.014 25.7 10.5 103 280-421 172-278 (287)
467 2rjn_A Response regulator rece 24.2 3.1E+02 0.011 22.8 8.6 62 463-524 43-111 (154)
468 2zds_A Putative DNA-binding pr 24.2 1.6E+02 0.0054 28.8 7.4 39 266-304 15-64 (340)
469 4h3d_A 3-dehydroquinate dehydr 24.1 4.1E+02 0.014 25.8 10.3 143 243-402 11-173 (258)
470 1xky_A Dihydrodipicolinate syn 24.1 3.2E+02 0.011 27.1 9.7 87 330-428 47-137 (301)
471 1sgj_A Citrate lyase, beta sub 24.1 2.4E+02 0.0081 27.7 8.6 120 266-405 17-152 (284)
472 1ka9_F Imidazole glycerol phos 24.0 97 0.0033 29.4 5.6 68 267-340 32-108 (252)
473 2y1h_A Putative deoxyribonucle 24.0 1.7E+02 0.0058 27.8 7.4 103 266-370 20-145 (272)
474 1zmr_A Phosphoglycerate kinase 24.0 50 0.0017 34.8 3.6 295 90-491 34-350 (387)
475 4g9p_A 4-hydroxy-3-methylbut-2 23.9 1E+02 0.0034 32.7 5.9 50 103-155 40-89 (406)
476 3ks6_A Glycerophosphoryl diest 23.8 2.5E+02 0.0085 26.8 8.6 105 280-424 134-244 (250)
477 4ew6_A D-galactose-1-dehydroge 23.8 1.6E+02 0.0054 29.5 7.4 84 320-427 69-156 (330)
478 2r8w_A AGR_C_1641P; APC7498, d 23.7 2.9E+02 0.01 27.9 9.4 94 324-429 62-160 (332)
479 3vab_A Diaminopimelate decarbo 23.6 1.7E+02 0.0059 30.8 7.9 73 65-152 95-170 (443)
480 3qll_A Citrate lyase; beta bar 23.5 2.2E+02 0.0076 28.7 8.4 68 268-335 56-135 (316)
481 3tj4_A Mandelate racemase; eno 23.5 3.8E+02 0.013 27.3 10.3 62 90-154 137-204 (372)
482 2vws_A YFAU, 2-keto-3-deoxy su 23.4 2.4E+02 0.0083 27.5 8.5 68 267-335 28-96 (267)
483 3qy7_A Tyrosine-protein phosph 23.3 4.4E+02 0.015 25.5 10.4 125 269-413 24-171 (262)
484 3l49_A ABC sugar (ribose) tran 23.1 3.3E+02 0.011 25.4 9.2 65 471-540 191-261 (291)
485 2v9d_A YAGE; dihydrodipicolini 23.1 2.8E+02 0.0095 28.3 9.1 88 330-429 66-157 (343)
486 3nco_A Endoglucanase fncel5A; 23.0 1.4E+02 0.0048 29.3 6.8 52 103-156 43-104 (320)
487 3afo_A NADH kinase POS5; alpha 23.0 32 0.0011 36.1 2.0 35 469-503 226-264 (388)
488 3eqz_A Response regulator; str 23.0 1.3E+02 0.0044 24.4 5.6 66 472-539 47-123 (135)
489 3fst_A 5,10-methylenetetrahydr 22.9 85 0.0029 31.8 5.1 49 265-314 163-211 (304)
490 3dz1_A Dihydrodipicolinate syn 22.9 2.7E+02 0.0091 27.9 8.8 87 330-429 43-132 (313)
491 3kux_A Putative oxidoreductase 22.9 1.7E+02 0.0057 29.3 7.4 84 320-427 56-142 (352)
492 1kbi_A Cytochrome B2, L-LCR; f 22.8 1.6E+02 0.0055 31.9 7.6 66 268-337 354-433 (511)
493 1geq_A Tryptophan synthase alp 22.7 4.7E+02 0.016 24.4 12.4 53 308-370 81-139 (248)
494 3ijp_A DHPR, dihydrodipicolina 22.7 3.2E+02 0.011 27.3 9.3 84 321-432 80-163 (288)
495 2yr1_A 3-dehydroquinate dehydr 22.7 5.3E+02 0.018 25.0 11.6 121 269-405 36-176 (257)
496 1v5x_A PRA isomerase, phosphor 22.7 1.5E+02 0.0051 28.0 6.5 69 266-336 9-82 (203)
497 3hv2_A Response regulator/HD d 22.6 2.8E+02 0.0094 23.2 7.9 61 464-524 51-118 (153)
498 2ojp_A DHDPS, dihydrodipicolin 22.6 3.2E+02 0.011 26.9 9.3 93 324-428 29-126 (292)
499 2whl_A Beta-mannanase, baman5; 22.6 91 0.0031 30.4 5.2 52 103-156 33-86 (294)
500 3apt_A Methylenetetrahydrofola 22.6 71 0.0024 32.3 4.4 60 266-326 161-220 (310)
No 1
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=9e-139 Score=1137.30 Aligned_cols=491 Identities=32% Similarity=0.501 Sum_probs=459.0
Q ss_pred ccccccccccccccchhhhhhcccCCCCCceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHh
Q 008172 62 QENKHGLSLGFDAVSEGELREKGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLN 141 (575)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~ 141 (575)
...+|+|.|+|++.+ .++|+|||||||||+|+++|+|++|+++||||||||||||++|+|.++++++|+++
T Consensus 44 ~~l~~~~~l~~~~~~---------~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~a~ 114 (550)
T 3gr4_A 44 TFLEHMCRLDIDSPP---------ITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTAT 114 (550)
T ss_dssp SHHHHHHTCCTTSCC---------CSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHH
T ss_pred cHHHHhhccCCCCCC---------ccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 445999999999977 77899999999999999999999999999999999999999999999999999999
Q ss_pred hh------cCCceEEEEeCCCCeEEEEecCCC--CceEEecCCEEEEEeecc--CCCCCcEEEecccccccccCCCCEEE
Q 008172 142 HE------KLFCISVMIDTEGSQIHVVDHGEP--NSVKVEEDSIWLFTAIKF--EGSRPFTVKANYAGFSEGIEVGDELV 211 (575)
Q Consensus 142 ~~------~~~~i~Il~Dl~GpkIRtG~~~~~--~~i~l~~G~~v~lt~~~~--~~~~~~~i~v~~~~l~~~v~~Gd~Il 211 (575)
++ +|+|++||+||||||||||.+.++ .++.|++|++|+|++++. ..++.+.+++||++|+++|++||+||
T Consensus 115 ~~~~~~~~~~~~vaIllDlkGPkIR~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~Gd~Il 194 (550)
T 3gr4_A 115 ESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIY 194 (550)
T ss_dssp HTTTTCTTTCCCCEEEEECCCSCCBBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEE
T ss_pred HhhccccccCceEEEEEeCCCCEEEEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcCCCCEEE
Confidence 88 899999999999999999999652 479999999999998763 23345789999999999999999999
Q ss_pred EeCCeeEEEEEEEECCeEEEEEecCeEecCCcccccccCcccccccccCCCCCccCHHHHHHHHHcCCCEEEecCcCChh
Q 008172 212 IDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDAD 291 (575)
Q Consensus 212 iDDG~i~l~V~~~~~~~i~~~V~~gG~l~s~K~vn~~r~g~~~~~~~~lp~lsekD~~di~~al~~gvd~I~~SfV~sa~ 291 (575)
+|||+|+|+|.++.++.+.|+|++||.|+++||||+ ||..+++|.|||||++||+|++++|+|||++||||+++
T Consensus 195 idDG~i~l~V~~v~~~~v~~~V~~gG~L~s~KgvNl------Pg~~l~lpalTekD~~dl~f~~~~~vD~ia~SfVr~a~ 268 (550)
T 3gr4_A 195 VDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNL------PGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKAS 268 (550)
T ss_dssp ETTTTEEEEEEEECSSEEEEEEEECEEECSSCBEEC------TTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHH
T ss_pred EeCCEEEEEEEEEeCCEEEEEEEeCcEEcCCceeec------CCCccCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHH
Confidence 999999999999999999999999999999999997 57889999999999999999999999999999999999
Q ss_pred hHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEeh
Q 008172 292 SVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVAS 371 (575)
Q Consensus 292 dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaT 371 (575)
|++++|+++.+.| .++.||||||+++|++|+|||++++|||||||||||+|+|.+++|.+||+|+++|+++|||||+||
T Consensus 269 Dv~~~r~~L~~~g-~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~AT 347 (550)
T 3gr4_A 269 DVHEVRKVLGEKG-KNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICAT 347 (550)
T ss_dssp HHHHHHHHHTTTT-TTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHHhcC-CCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 9999999999887 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHhhhcccccCCCC
Q 008172 372 QLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESL 451 (575)
Q Consensus 372 q~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~ 451 (575)
||||||++||+|||||++||||||+||+||+|||||||.|+||+|||++|++||+++|+...+...+.... .. ...
T Consensus 348 QMLeSMi~~p~PTRAEvsDVanAvldG~DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~---~~-~~~ 423 (550)
T 3gr4_A 348 QMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELR---RL-API 423 (550)
T ss_dssp STTGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHH---HH-SCC
T ss_pred hhhHHhhcCCCccHHHHHHHHHHHHcCCcEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHHhhh---hc-cCC
Confidence 99999999999999999999999999999999999999999999999999999999998655443332221 11 122
Q ss_pred CCchhhHHHHHHHHHHHhcCCcEEEEEcCChhHHHHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecCC------C
Q 008172 452 HDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLS------D 525 (575)
Q Consensus 452 ~~~~~~~ia~~av~~a~~~~AkaIVVfT~SG~TAr~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~------~ 525 (575)
+.+..+++|.+|+++|++++|++||+||.||+||+++|||||.+||||+|++++++|||+|+|||+|++++.. .
T Consensus 424 ~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~iSr~RP~~PIia~T~~~~~aR~l~L~~GV~P~~~~~~~~~~~~~ 503 (550)
T 3gr4_A 424 TSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAE 503 (550)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCSCEEEECSSSHHHHHHHTTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCSCCCSSHHH
T ss_pred CCChHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEEcCCHHHHHHHhccCCeEEEEecccccccccC
Confidence 4567899999999999999999999999999999999999999999999999999999999999999999754 4
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCccccceEEEEEcC
Q 008172 526 DMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQVKTIV 575 (575)
Q Consensus 526 d~d~~i~~al~~~~~~g~~k~GD~VVvv~G~~~~~g~t~~~~~i~v~~v~ 575 (575)
+.+++++.|++++++.|++++||.||+++|+|.++|+| |++||++||
T Consensus 504 ~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~~~g~G~T---N~lrv~~v~ 550 (550)
T 3gr4_A 504 DVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFT---NTMRVVPVP 550 (550)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTCEEEEEEESSSSTTCE---EEEEEEECC
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCEEEEEeCCCCCCCCC---eEEEEEEcC
Confidence 67899999999999999999999999999999998988 999999987
No 2
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=1.7e-137 Score=1126.30 Aligned_cols=477 Identities=30% Similarity=0.462 Sum_probs=440.5
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhh-hcCCceEEEEeCCCCeEEEEec
Q 008172 86 LGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNH-EKLFCISVMIDTEGSQIHVVDH 164 (575)
Q Consensus 86 ~~~r~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~-~~~~~i~Il~Dl~GpkIRtG~~ 164 (575)
.+.|||||||||||+|+++|+|++|+++||||||||||||++|+|.++++++|++++ +.|+|++||+||||||||||.+
T Consensus 41 ~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~~vaIl~Dl~GPkIR~g~~ 120 (526)
T 4drs_A 41 VTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPHSTVGIMLDTKGPEIRTGML 120 (526)
T ss_dssp -CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTTCCCEEEEECCCSCCBBCCB
T ss_pred cccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEECCCCeeEEEec
Confidence 467999999999999999999999999999999999999999999999999999976 6899999999999999999999
Q ss_pred CCCCceEEecCCEEEEEeeccCCCCCcEEEecccccccccCCCCEEEEeCCeeEEEEEEEECCeEEEEEecCeEecCCcc
Q 008172 165 GEPNSVKVEEDSIWLFTAIKFEGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAK 244 (575)
Q Consensus 165 ~~~~~i~l~~G~~v~lt~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~~~~i~~~V~~gG~l~s~K~ 244 (575)
.++.++.|++|+.|+|+++....++++.++++|++|++++++||+||+|||+|+|+|.++.++.+.|+|.+||.|+++||
T Consensus 121 ~~~~~i~L~~G~~v~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~~~V~~gG~L~~~Kg 200 (526)
T 4drs_A 121 EGGKPIELKAGQTLKITTDYSMLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQVLEIGDDFIVCKVLNSVTIGERKN 200 (526)
T ss_dssp STTCCEECCTTSEEEEESCCSSCBCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEECSSEEEEECCSCCEECSSCB
T ss_pred CCCCeEEecCCCEEEEEeCCccCCCcceeeecchhhHHHhcCCCEEEEeCCCceEEEEEEeCCeEEEEeccCcccccccc
Confidence 87778999999999999875443356799999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccccccccCCCCCccCHHH-HHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCC------CCceEEeeecCH
Q 008172 245 LSFRRNGILVERNHGLPTLSKKDWDD-IEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSS------RSIKVLAKIENL 317 (575)
Q Consensus 245 vn~~r~g~~~~~~~~lp~lsekD~~d-i~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~------~~i~IIaKIEt~ 317 (575)
||+ ||..+++|.|||||.+| |+||+++|+|||++||||+++|+.++|++|++++. .++.||||||++
T Consensus 201 vNl------P~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~ 274 (526)
T 4drs_A 201 MNL------PGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENL 274 (526)
T ss_dssp EEC------TTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSH
T ss_pred ccC------CCcccCcccccchhHHHHHHHHHHhccCeeeecccCchhhHHHHHHHHHhhCcccccccccceeeeehhcc
Confidence 997 47889999999999998 68999999999999999999999999999998762 368999999999
Q ss_pred HHHhcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHc
Q 008172 318 ESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQ 397 (575)
Q Consensus 318 ~av~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~ 397 (575)
+|++|||||++++|||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||++||+|||||++||||||+|
T Consensus 275 ~av~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~D 354 (526)
T 4drs_A 275 EGVINFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLD 354 (526)
T ss_dssp HHHHTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcCCcEEEE
Q 008172 398 YADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFV 477 (575)
Q Consensus 398 G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~AkaIVV 477 (575)
|+||+|||||||.|+||+|||++|++||+++|++..+...+.... .. ...+.+..+++|.+|+++|.+++|++||+
T Consensus 355 GaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~--~~--~~~~~~~~~aia~aa~~~A~~l~a~aIv~ 430 (526)
T 4drs_A 355 GSDCVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIH--SS--VPKPVAVPEAIACSAVESAHDVNAKLIIT 430 (526)
T ss_dssp TCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHH--HH--SCSSCCHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCceEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhh--hc--cCCCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 999999999999999999999999999999999766554333221 11 12355788999999999999999999999
Q ss_pred EcCChhHHHHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCC
Q 008172 478 YTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLT 557 (575)
Q Consensus 478 fT~SG~TAr~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~~~~~g~~k~GD~VVvv~G~~ 557 (575)
||.||+||+++|||||.+||||+|++++++|||+|+|||+|+++++..+.+++++.|+++++++|++++||.||+++|+|
T Consensus 431 ~T~sG~tA~~iSr~RP~~pI~a~T~~~~~~r~l~L~wGV~p~~~~~~~~~d~~i~~a~~~~~~~g~~~~GD~vVi~~G~p 510 (526)
T 4drs_A 431 ITETGNTARLISKYRPSQTIIACTAKPEVARGLKIARGVKTYVLNSIHHSEVVISNALALAKEESLIESGDFAIAVHGVK 510 (526)
T ss_dssp ECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECSCCCCHHHHHHHHHHHHHHTTSCCTTCEEEEEC---
T ss_pred ECCCcHHHHHHHhhCCCCCEEEECCCHHHHHhhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCccccceEEEEEcC
Q 008172 558 PA-HVTSTAFQSIQVKTIV 575 (575)
Q Consensus 558 ~~-~g~t~~~~~i~v~~v~ 575 (575)
.| +|+| |+|||++||
T Consensus 511 ~g~~G~T---N~lrv~~VP 526 (526)
T 4drs_A 511 ESCPGSC---NLMKIVRCP 526 (526)
T ss_dssp ----------CCEEEEECC
T ss_pred CCCCCcc---eEEEEEECC
Confidence 97 7988 999999998
No 3
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.8e-136 Score=1113.06 Aligned_cols=473 Identities=31% Similarity=0.502 Sum_probs=432.8
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhh-hcCCceEEEEeCCCCeEEEEec
Q 008172 86 LGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNH-EKLFCISVMIDTEGSQIHVVDH 164 (575)
Q Consensus 86 ~~~r~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~-~~~~~i~Il~Dl~GpkIRtG~~ 164 (575)
.++|+|||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++ +.|+|++||+||||||||+|.+
T Consensus 43 ~~~rkTKIV~TiGPas~s~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~~~~~vaIllDl~GPkIR~G~~ 122 (520)
T 3khd_A 43 LRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQELRPNCLLGMLLDTKGPEIRTGFL 122 (520)
T ss_dssp GGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCSSCCCEEEEECCCCCEEBCEE
T ss_pred ccCCCcEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEeCCCCeEEeecc
Confidence 467999999999999999999999999999999999999999999999999999998 8999999999999999999999
Q ss_pred CCCCceEEecCCEEEEEee-ccCCCCCcEEEecccccccccCCCCEEEEeCCeeEEEEEEEECCeEEEEEecCeEecCCc
Q 008172 165 GEPNSVKVEEDSIWLFTAI-KFEGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRA 243 (575)
Q Consensus 165 ~~~~~i~l~~G~~v~lt~~-~~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~~~~i~~~V~~gG~l~s~K 243 (575)
.++ .+.|++|++|+|+++ +..+ +.+.+++||++|+++|++||+||+|||+|.|+|.++.++.+.|+|++||.|+++|
T Consensus 123 ~~~-~~~L~~G~~~~lt~~~~~~g-~~~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~~~V~~gG~L~~~K 200 (520)
T 3khd_A 123 KNK-EVHLKEGSKLKLVTDYEFLG-DETCIACSYKKLPQSVKPGNIILIADGSVSCKVLETHEDHVITEVLNSAVIGERK 200 (520)
T ss_dssp C------------CEEESCTTCEE-CTTEEEBSCTTHHHHCCC-CEEEETTTTEEEEEEEECSSCEEEEECC-CCCCSSC
T ss_pred CCC-CeEecCCCEEEEecCCCcCC-CccEEecccHHHHhhcCcCcEEEEeCCEEEEEEEEEECCEEEEEEEeCeEEeCCc
Confidence 764 359999999999987 3334 4578999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCcccccccccCCCCCccCHHHH-HHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhc
Q 008172 244 KLSFRRNGILVERNHGLPTLSKKDWDDI-EFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQK 322 (575)
Q Consensus 244 ~vn~~r~g~~~~~~~~lp~lsekD~~di-~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~n 322 (575)
|||+ ||..+++|.|||||++|| +|++++|+|||++||||+++|+.++|+++.+.| .++.||||||+++||+|
T Consensus 201 gvNl------Pg~~~~lp~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~g-~~i~IIAKIE~~eav~n 273 (520)
T 3khd_A 201 NMNL------PNVKVDLPIISEKDKNDILNFAIPMGCNFIAASFIQSADDVRLIRNLLGPRG-RHIKIIPKIENIEGIIH 273 (520)
T ss_dssp EEEC------TTSCCCSCSSCHHHHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHHHTTTT-TTSEEEEEECSHHHHHT
T ss_pred eeec------CCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcC-CCCcEEEEECCHHHHHh
Confidence 9997 578899999999999999 999999999999999999999999999999887 68999999999999999
Q ss_pred HHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceE
Q 008172 323 FEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADAL 402 (575)
Q Consensus 323 ldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~v 402 (575)
+|||++++|||||||||||+|+|.++||.+||+|+++|+++|||||+||||||||++||+|||||++||||||+||+||+
T Consensus 274 ldeIl~~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVldGaDav 353 (520)
T 3khd_A 274 FDKILAESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCV 353 (520)
T ss_dssp HHHHHHHSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHhCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCcCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcCCcEEEEEcCCh
Q 008172 403 MLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHG 482 (575)
Q Consensus 403 mLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~AkaIVVfT~SG 482 (575)
|||||||.|+||+|||++|++||+++|+...+...+.... .. ...+.+..+++|.+|+++|++++|++||+||.||
T Consensus 354 MLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~--~~--~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG 429 (520)
T 3khd_A 354 MLSGETAGGKFPVEAVTIMSKICLEAEACIDYKLLYQSLV--NA--IETPISVQEAVARSAVETAESIQASLIIALTETG 429 (520)
T ss_dssp EESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHH--HH--SCSCCCHHHHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred EecccccCCcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhh--hc--cCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCc
Confidence 9999999999999999999999999998665443332210 01 1124467899999999999999999999999999
Q ss_pred hHHHHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCC-CC
Q 008172 483 HMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPA-HV 561 (575)
Q Consensus 483 ~TAr~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~~~~~g~~k~GD~VVvv~G~~~~-~g 561 (575)
+||+++|||||.+||||+|++++++|||+|+|||+|++++...+.+++++.+++++++.|++++||.||+++|+|.| +|
T Consensus 430 ~TA~~vSr~RP~~PIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~~~g~~G 509 (520)
T 3khd_A 430 YTARLIAKYKPSCTILALSASDSTVKCLNVHRGVTCIKVGSFQGTDIVIRNAIEIAKQRNMAKVGDSVIAIHGIKEEVSG 509 (520)
T ss_dssp HHHHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECCSCCCHHHHHHHHHHHHHHTTSSCTTCEEEEEEC-CCSSTT
T ss_pred HHHHHHHhcCCCCCEEEEcCCHHHHHHHhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCccCCCCC
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999996 88
Q ss_pred CccccceEEEEEc
Q 008172 562 TSTAFQSIQVKTI 574 (575)
Q Consensus 562 ~t~~~~~i~v~~v 574 (575)
+| |++||++|
T Consensus 510 ~T---N~lrv~~v 519 (520)
T 3khd_A 510 GT---NLMKVVQI 519 (520)
T ss_dssp CE---EEEEEEEC
T ss_pred CC---eEEEEEEe
Confidence 88 99999986
No 4
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=2.1e-136 Score=1110.57 Aligned_cols=474 Identities=32% Similarity=0.495 Sum_probs=438.5
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeCCCCeEEEEecC
Q 008172 86 LGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTEGSQIHVVDHG 165 (575)
Q Consensus 86 ~~~r~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~GpkIRtG~~~ 165 (575)
..+|+|||||||||+|+++|+|++|+++||||||||||||++|+|.++++++|++++++|+|++||+||||||||||.+.
T Consensus 17 ~~~rkTKIv~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~g~~vaIl~Dl~GPkIR~g~~~ 96 (499)
T 3hqn_D 17 ANYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELGVNIAIALDTKGPEIRTGQFV 96 (499)
T ss_dssp CSSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCCBBCCBG
T ss_pred ccCCCeEEEEEECCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCcEEEEEeCCCCEEeeeccC
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCceEEecCCEEEEEeecc--CCCCCcEEEecccccccccCCCCEEEEeCCeeEEEEEEEE-CCeEEEEEecCeEecCC
Q 008172 166 EPNSVKVEEDSIWLFTAIKF--EGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKV-GNDLRCKCTDPGVFLPR 242 (575)
Q Consensus 166 ~~~~i~l~~G~~v~lt~~~~--~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~-~~~i~~~V~~gG~l~s~ 242 (575)
++..+ |++|++|+|+++.. ..++.+.+++||++|+++|++||.||+|||+|+|+|.++. ++.+.|+|.+||.|+++
T Consensus 97 ~~~~v-L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~i~~~v~~gG~L~~~ 175 (499)
T 3hqn_D 97 GGDAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHEDEQTLECTVTNSHTISDR 175 (499)
T ss_dssp GGEEE-ECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEEETTEEEEEECSCEEEETT
T ss_pred CCCeE-EcCCCEEEEEecCcccCCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEcCCCeEEEEEEeCcEeeCC
Confidence 64467 99999999998742 2234578999999999999999999999999999999997 67899999999999999
Q ss_pred cccccccCcccccccccCCCCCccCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhc
Q 008172 243 AKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQK 322 (575)
Q Consensus 243 K~vn~~r~g~~~~~~~~lp~lsekD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~n 322 (575)
||||+ ||..+++|.|||||++||+|++++|+|||++||||+++|++++|+++.+.+ .++.||||||+++|++|
T Consensus 176 KgvNl------Pg~~~~lp~ltekD~~dl~~~~~~~vD~i~~sfVr~a~dv~~~r~~l~~~~-~~i~IiaKIE~~eav~n 248 (499)
T 3hqn_D 176 RGVNL------PGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKG-RDIMIICKIENHQGVQN 248 (499)
T ss_dssp CBEEC------TTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHCGGG-TTSEEEEEECSHHHHHT
T ss_pred Cceec------CCCCCCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcC-CCCeEEEEECCHHHHHh
Confidence 99997 578899999999999999999999999999999999999999999998876 78999999999999999
Q ss_pred HHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceE
Q 008172 323 FEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADAL 402 (575)
Q Consensus 323 ldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~v 402 (575)
+|||++++|||||||||||+|+|.++||.+||+|+++|+++|||||+||||||||++||+|||||++||||||+||+||+
T Consensus 249 ldeIl~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~Dav 328 (499)
T 3hqn_D 249 IDSIIEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCV 328 (499)
T ss_dssp HHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCcCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcCCcEEEEEcCCh
Q 008172 403 MLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHG 482 (575)
Q Consensus 403 mLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~AkaIVVfT~SG 482 (575)
|||||||.|+||+|||++|++||+++|+...+...+... ... ...+.+..+++|.+|+++|++++|++||+||.||
T Consensus 329 MLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~---~~~-~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG 404 (499)
T 3hqn_D 329 MLSGETAKGKYPNEVVQYMARICLEAQSALNEYVFFNSI---KKL-QHIPMSADEAVCSSAVNSVYETKAKAMVVLSNTG 404 (499)
T ss_dssp EESHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHH---HHT-CCSSCCHHHHHHHHHHHHHHHHTCSEEEEECSSS
T ss_pred EEeccccCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhh---hhc-cCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCc
Confidence 999999999999999999999999999876554333222 111 1224567899999999999999999999999999
Q ss_pred hHHHHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecCC-----CCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCC
Q 008172 483 HMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLS-----DDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLT 557 (575)
Q Consensus 483 ~TAr~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~-----~d~d~~i~~al~~~~~~g~~k~GD~VVvv~G~~ 557 (575)
+||+++|||||.+||||+|++++++|||+|+|||+|++++.. .+.+++++.|++++++.|++++||.||+++|+|
T Consensus 405 ~tA~~isr~RP~~pIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~~ 484 (499)
T 3hqn_D 405 RSARLVAKYRPNCPIVCVTTRLQTCRQLNITQGVESVFFDADKLGHDEGKEHRVAAGVEFAKSKGYVQTGDYCVVIHADH 484 (499)
T ss_dssp HHHHHHHHTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCHHHHCCCTTCHHHHHHHHHHHHHTTSCCTTCEEEEEEECC
T ss_pred HHHHHHHhhCCCCCEEEEcCCHHHHHHhhccCCeEEEEeccccccccCCHHHHHHHHHHHHHHcCCCCCcCEEEEEeCCC
Confidence 999999999999999999999999999999999999998753 378999999999999999999999999999999
Q ss_pred CCCCCccccceEEEEEc
Q 008172 558 PAHVTSTAFQSIQVKTI 574 (575)
Q Consensus 558 ~~~g~t~~~~~i~v~~v 574 (575)
.++|+| |++||++|
T Consensus 485 ~~~G~T---N~~rv~~v 498 (499)
T 3hqn_D 485 KVKGYA---NQTRILLV 498 (499)
T ss_dssp -----C---EEEEEEEC
T ss_pred CCCCCC---eEEEEEEc
Confidence 888988 99999987
No 5
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=1e-135 Score=1106.51 Aligned_cols=475 Identities=31% Similarity=0.500 Sum_probs=438.1
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhc-CCceEEEEeCCCCeEEEEec
Q 008172 86 LGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEK-LFCISVMIDTEGSQIHVVDH 164 (575)
Q Consensus 86 ~~~r~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~-~~~i~Il~Dl~GpkIRtG~~ 164 (575)
.++|+|||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++++ |+|++||+||||||||+|.+
T Consensus 33 ~~~rkTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~~vaIl~Dl~GPkIR~g~~ 112 (511)
T 3gg8_A 33 WTAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPEARLAILLDTKGPEIRTGFL 112 (511)
T ss_dssp HTTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCTTCCCEEEEECCCCCCBBCC-
T ss_pred cccCccEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEECCCCEEecccC
Confidence 45799999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred CCCCceEEecCCEEEEEee-ccCCCCCcEEEecccccccccCCCCEEEEeCCeeEEEEEEEECCeEEEEEecCeEecCCc
Q 008172 165 GEPNSVKVEEDSIWLFTAI-KFEGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRA 243 (575)
Q Consensus 165 ~~~~~i~l~~G~~v~lt~~-~~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~~~~i~~~V~~gG~l~s~K 243 (575)
.++.++.|++|++|+|+.+ +..+ +.+.+++||++|+++|++||+||+|||+|+|+|.++.++.+.|+|.+||.|+++|
T Consensus 113 ~~~~~v~L~~G~~~~lt~~~~~~g-~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~~~V~~gG~L~~~K 191 (511)
T 3gg8_A 113 KDHKPITLQQGATLKIVTDYNLIG-DETTIACSYGALPQSVKPGNTILIADGSLSVKVVEVGSDYVITQAQNTATIGERK 191 (511)
T ss_dssp ----CEEECTTCEEEEESCTTCCC-CSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSEEEEEESSCEEECSSC
T ss_pred CCCCCEEEccCCEEEEEECCCCCC-CCCEEEcchHHHHhhcCCCCEEEEECCEEEEEEEEEeCCEEEEEEEeCeEEcCCc
Confidence 7645799999999999987 3444 4578999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCcccccccccCCCCCccCHHHH-HHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhc
Q 008172 244 KLSFRRNGILVERNHGLPTLSKKDWDDI-EFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQK 322 (575)
Q Consensus 244 ~vn~~r~g~~~~~~~~lp~lsekD~~di-~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~n 322 (575)
|||+ ||..+++|.|||||++|| +|++++|+|||++||||+++|++++|+++.+.+ .++.||||||+++|++|
T Consensus 192 gvNl------Pg~~~~lp~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~-~~~~iiaKIE~~eav~n 264 (511)
T 3gg8_A 192 NMNL------PNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRG-RHIRIIPKIENVEGLVN 264 (511)
T ss_dssp BEEC------TTCCCCSCSSCHHHHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGGG-TTCEEEEEECSHHHHHT
T ss_pred ceec------CCCccCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhcC-CCCeEEEEECCHHHHHh
Confidence 9997 478899999999999999 999999999999999999999999999999887 68999999999999999
Q ss_pred HHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceE
Q 008172 323 FEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADAL 402 (575)
Q Consensus 323 ldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~v 402 (575)
+|||++++|||||||||||+|+|.++||.+||+|+++|+++|||||+||||||||++||+|||||++||||||+||+||+
T Consensus 265 ldeIl~~sDgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDav 344 (511)
T 3gg8_A 265 FDEILAEADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCV 344 (511)
T ss_dssp HHHHHHHCSCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHhCCeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCcCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcCCcEEEEEcCCh
Q 008172 403 MLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHG 482 (575)
Q Consensus 403 mLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~AkaIVVfT~SG 482 (575)
|||||||.|+||+|||++|++||+++|+...+...++.... . ...+.+..+++|.+|+++|.+++|++||+||.||
T Consensus 345 MLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~--~--~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG 420 (511)
T 3gg8_A 345 MLSGETANGEFPVITVETMARICYEAETCVDYPALYRAMCL--A--VPPPISTQEAVARAAVETAECVNAAIILALTETG 420 (511)
T ss_dssp EESHHHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH--H--SCSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSS
T ss_pred EecccccCCCCHHHHHHHHHHHHHHHHhchhHHHHHhhhhh--c--ccCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCc
Confidence 99999999999999999999999999986554333322200 1 1224467899999999999999999999999999
Q ss_pred hHHHHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCC-CC
Q 008172 483 HMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPA-HV 561 (575)
Q Consensus 483 ~TAr~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~~~~~g~~k~GD~VVvv~G~~~~-~g 561 (575)
+||+++|||||.+||||+|++++++|||+|+|||+|++++...+.+++++.|++++++.|++++||.||+++|+|.| +|
T Consensus 421 ~tA~~iSr~RP~~PIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVi~~G~~~g~~G 500 (511)
T 3gg8_A 421 QTARLIAKYRPMQPILALSASESTIKHLQVIRGVTTMQVPSFQGTDHVIRNAIVVAKERELVTEGESIVAVHGMKEEVAG 500 (511)
T ss_dssp HHHHHHHHTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCC--CHHHHHHHHHHHHHHTTSCCTTCEEEEEEEC------
T ss_pred hHHHHHHhhCCCCCEEEEcCCHHHHHHhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCccCCCCC
Confidence 99999999999999999999999999999999999999988889999999999999999999999999999999986 88
Q ss_pred CccccceEEEEEcC
Q 008172 562 TSTAFQSIQVKTIV 575 (575)
Q Consensus 562 ~t~~~~~i~v~~v~ 575 (575)
+| |++||++||
T Consensus 501 ~T---N~lrv~~v~ 511 (511)
T 3gg8_A 501 SS---NLLKVLTVE 511 (511)
T ss_dssp CC---EEEEEEECC
T ss_pred CC---eEEEEEEcC
Confidence 88 999999986
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=3.7e-134 Score=1115.20 Aligned_cols=477 Identities=32% Similarity=0.523 Sum_probs=445.0
Q ss_pred hhcccCCCCCceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeCCCCeEE
Q 008172 81 REKGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTEGSQIH 160 (575)
Q Consensus 81 ~~~~~~~~r~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~GpkIR 160 (575)
...|..++|+|||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++++|+|++||+||||||||
T Consensus 15 ~~~~~~~~r~TKIv~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~vail~Dl~GPkiR 94 (606)
T 3t05_A 15 VPRGSHMMRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIR 94 (606)
T ss_dssp -------CCCSEEEEECCGGGCSHHHHHHHHHTTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCCCCCB
T ss_pred CcCCcccccCceEEEEcCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCEEE
Confidence 34566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCceEEecCCEEEEEeeccCCCCCcEEEecccccccccCCCCEEEEeCCeeEEEE--EEEECCeEEEEEecCeE
Q 008172 161 VVDHGEPNSVKVEEDSIWLFTAIKFEGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEV--IEKVGNDLRCKCTDPGV 238 (575)
Q Consensus 161 tG~~~~~~~i~l~~G~~v~lt~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V--~~~~~~~i~~~V~~gG~ 238 (575)
||.+.+ .++.|++|++|+|+.++..+ +.+.+++||++|++++++||+||+|||+|+|+| .++.++.+.|+|.+||.
T Consensus 95 ~g~~~~-~~i~L~~G~~~~lt~~~~~g-~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~v~~~V~~gG~ 172 (606)
T 3t05_A 95 THNMKD-GIIELERGNEVIVSMNEVEG-TPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGE 172 (606)
T ss_dssp BCCBTT-SEEECCSSCEEEEESSCCCB-CSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTTTEEEEEECSCCE
T ss_pred eecCCC-CCEEEcCCCEEEEEecCcCC-CCCEEEeccHHHHHhcCCCCEEEEeCCeEEEEEEEEEecCCEEEEEEEECeE
Confidence 999975 47999999999999887555 457899999999999999999999999999999 77888999999999999
Q ss_pred ecCCcccccccCcccccccccCCCCCccCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHH
Q 008172 239 FLPRAKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLE 318 (575)
Q Consensus 239 l~s~K~vn~~r~g~~~~~~~~lp~lsekD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~ 318 (575)
|+++||||+ ||..+++|.|||||++||+|++++|+|||++||||+++|++++|+++.+.+ .++.||||||+++
T Consensus 173 L~~~KgvNl------Pg~~~~lp~ltekD~~dl~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~-~~i~IiaKIE~~e 245 (606)
T 3t05_A 173 LKNKKGVNL------PGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREILEEQK-ANISVFPKIENQE 245 (606)
T ss_dssp EETTCBEEC------SSSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHHHTT-CCCEEEECCCSHH
T ss_pred EeCCceEEC------CCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcC-CCCeEEEEeCCHH
Confidence 999999997 578899999999999999999999999999999999999999999999887 6899999999999
Q ss_pred HHhcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcc
Q 008172 319 SLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQY 398 (575)
Q Consensus 319 av~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G 398 (575)
|++|||||++++|||||||||||+|+|+|+||.+||+|+++|+++|||||+||||||||++||+|||||++||||||+||
T Consensus 246 av~nldeIl~~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dG 325 (606)
T 3t05_A 246 GIDNIEEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDG 325 (606)
T ss_dssp HHHTHHHHHHHCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHT
T ss_pred HHHhHHHHHHhCCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcCCcEEEEE
Q 008172 399 ADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVY 478 (575)
Q Consensus 399 ~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~AkaIVVf 478 (575)
+||+|||||||.|+||+|||++|++||+++|+...+...+... .. ..+.+..+++|.+|+++|++++|++||+|
T Consensus 326 aDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~---~~---~~~~~~~~aia~aa~~~a~~l~a~aIv~~ 399 (606)
T 3t05_A 326 TDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDR---TK---LVETSLVNAIGISVAHTALNLNVKAIVAA 399 (606)
T ss_dssp CSEEEECHHHHSCSCSHHHHHHHHHHHHHHHHTSCHHHHHHHH---HH---HSCCCHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCEEEecccccCCCCHHHHHHHHHHHHHHHHhhhhhHhhhhhh---cc---ccCCCHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999999999999999999999876544322211 00 11346789999999999999999999999
Q ss_pred cCChhHHHHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCC
Q 008172 479 TKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTP 558 (575)
Q Consensus 479 T~SG~TAr~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~~~~~g~~k~GD~VVvv~G~~~ 558 (575)
|.||+||+++|||||.+||||+|++++++|||+|+|||+|++++...+.+++++.++++++++|++++||.||+++|+|.
T Consensus 400 T~sG~ta~~isr~RP~~pIia~t~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vVi~~G~p~ 479 (606)
T 3t05_A 400 TESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVTNGDLIIITAGVPT 479 (606)
T ss_dssp CSSSHHHHHHHHTCCSSEEEEEESCHHHHHHHHTSSSEEEEECCCCSSHHHHHHHHHHHHHHTTSCCTTCEEEEEECSST
T ss_pred cCCchHHHHHHhhCCCCCEEEEcCCHHHHHhhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEeCccC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999998
Q ss_pred C-CCCccccceEEEEEcC
Q 008172 559 A-HVTSTAFQSIQVKTIV 575 (575)
Q Consensus 559 ~-~g~t~~~~~i~v~~v~ 575 (575)
+ +|+| |++||++|.
T Consensus 480 g~~g~t---N~~~v~~v~ 494 (606)
T 3t05_A 480 GETGTT---NMMKIHLVG 494 (606)
T ss_dssp TTCSSC---CEEEEEECC
T ss_pred CCCCCc---cceEEEEec
Confidence 6 8988 999999874
No 7
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=2.1e-133 Score=1083.93 Aligned_cols=468 Identities=33% Similarity=0.518 Sum_probs=422.9
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeCCCCeEEEEecCCC
Q 008172 88 LRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTEGSQIHVVDHGEP 167 (575)
Q Consensus 88 ~r~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~GpkIRtG~~~~~ 167 (575)
+|+|||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++++|+|++|++||||||||||.+.++
T Consensus 1 ~r~tkIv~TiGPas~~~e~l~~li~aGm~v~RlNfsHg~~e~h~~~i~~iR~~~~~~~~~v~il~Dl~GPkiR~g~~~~~ 80 (470)
T 1e0t_A 1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGG 80 (470)
T ss_dssp CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCEEBCCBGGG
T ss_pred CCcceEEEECCCccCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCCceEEEEeCCCCEEEEEecCCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999723
Q ss_pred CceEEecCCEEEEEee-ccCCCCCcEEEecccccccccCCCCEEEEeCCeeEEEEEEEECCeEEEEEecCeEecCCcccc
Q 008172 168 NSVKVEEDSIWLFTAI-KFEGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAKLS 246 (575)
Q Consensus 168 ~~i~l~~G~~v~lt~~-~~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~~~~i~~~V~~gG~l~s~K~vn 246 (575)
.++.|++|++|+|+.+ ...+ +++.+++||++|+++|++||.||+|||+|+|+|.++.++.+.|+|.+||.|+++||||
T Consensus 81 ~~v~L~~G~~~~lt~~~~~~g-~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~~~~i~~~v~~gG~L~~~KgvN 159 (470)
T 1e0t_A 81 NDVSLKAGQTFTFTTDKSVIG-NSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVN 159 (470)
T ss_dssp CCEEECTTCEEEEESCTTCCB-BTTEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTEEEEEECSCEEECSSCEEE
T ss_pred CceEEecCCEEEEEeCCccCC-CCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEeCCeEEEEEecCcEEeCCceee
Confidence 4699999999999987 3334 4579999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccccccccCCCCCccCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhcc-CCCCceEEeeecCHHHHhcHHH
Q 008172 247 FRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGK-SSRSIKVLAKIENLESLQKFEE 325 (575)
Q Consensus 247 ~~r~g~~~~~~~~lp~lsekD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~-~~~~i~IIaKIEt~~av~nlde 325 (575)
+ ||..+++|.|||||.+||+|++++|+|+|++|||++++|++++++++.+. + .++.||||||+++|++|+||
T Consensus 160 l------Pg~~~~lp~ltekD~~Di~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~-~~i~IiakIEt~eav~nlde 232 (470)
T 1e0t_A 160 L------PGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGG-ENIHIISKIENQEGLNNFDE 232 (470)
T ss_dssp C------SSCCCCCCSSCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTC-TTCEEEEEECSHHHHHTHHH
T ss_pred c------CCCcCCCCCCCcCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHhcC-CCceEEEEECCHHHHHhHHH
Confidence 6 57889999999999999999999999999999999999999999999887 6 67999999999999999999
Q ss_pred HHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 326 IVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 326 I~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
|++++|||||||||||+|+|.+++|.+||+|+++|+++|||+|+||||||||++||+|||||++||||||+||+||+|||
T Consensus 233 I~~~sDgImVargDLgveig~e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~dG~DavMLS 312 (470)
T 1e0t_A 233 ILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLS 312 (470)
T ss_dssp HHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHCCEEEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCccHHHHhhhhHhhhcCccEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcCCcEEEEEcCChhHH
Q 008172 406 GESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMA 485 (575)
Q Consensus 406 ~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~AkaIVVfT~SG~TA 485 (575)
||||.|+||+|||++|++||+++|+...+...+. ... . ..+..+++|.+|+++|++++|++||+||.||+||
T Consensus 313 gETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~~------~~~-~-~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta 384 (470)
T 1e0t_A 313 GESAKGKYPLEAVSIMATICERTDRVMNSRLEFN------NDN-R-KLRITEAVCRGAVETAEKLDAPLIVVATQGGKSA 384 (470)
T ss_dssp CC------CHHHHHHHHHHHHHHHTTCCCCCC-----------------CHHHHHHHHHHHHHHTTCSBEEEECSSSHHH
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHhhhhhhHHHh------hhc-c-ccchHHHHHHHHHHHHHhcCCCEEEEECCChhHH
Confidence 9999999999999999999999998543221111 000 1 1246799999999999999999999999999999
Q ss_pred HHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCccc
Q 008172 486 SLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTA 565 (575)
Q Consensus 486 r~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~~~~~g~~k~GD~VVvv~G~~~~~g~t~~ 565 (575)
+++|||||.+||||+|++++++|||+|+|||+|+++++..+.+++++.+++++++.|++++||.||+++|+|..+|+|
T Consensus 385 ~~isr~RP~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vvv~~g~~~~~g~t-- 462 (470)
T 1e0t_A 385 RAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTT-- 462 (470)
T ss_dssp HHHHTTCCSSBEEEEESCHHHHHHGGGSTTEEEEECSCCCSHHHHHHHHHHHHHHTSSSCTTCEEEEEECSSSCTTCC--
T ss_pred HHHHhhCCCCCEEEECCCHHHHHHhhhhccceEEEecCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCCCCCCCcc--
Confidence 999999999999999999999999999999999999988899999999999999999999999999999999337877
Q ss_pred cceEEEEEc
Q 008172 566 FQSIQVKTI 574 (575)
Q Consensus 566 ~~~i~v~~v 574 (575)
|+|||++|
T Consensus 463 -n~~~v~~v 470 (470)
T 1e0t_A 463 -NTASVHVL 470 (470)
T ss_dssp -CEEEEEEC
T ss_pred -ceEEEEEC
Confidence 99999975
No 8
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=1.8e-130 Score=1088.17 Aligned_cols=471 Identities=33% Similarity=0.519 Sum_probs=441.8
Q ss_pred CCCCceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeCCCCeEEEEecCC
Q 008172 87 GLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTEGSQIHVVDHGE 166 (575)
Q Consensus 87 ~~r~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~GpkIRtG~~~~ 166 (575)
++|+|||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++++|+|++||+||||||||||.+.+
T Consensus 1 ~~r~tkIv~TiGPas~~~~~l~~l~~aGm~v~RlNfsHg~~~~h~~~i~~ir~~~~~~~~~v~il~Dl~GPkiR~g~~~~ 80 (587)
T 2e28_A 1 MKRKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTGRTVAILLDTKGPEIRTHNMEN 80 (587)
T ss_dssp CCCCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCCCCCBBCCCTT
T ss_pred CCCCceEEEECCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCceEEEEeCCCCEEEEeccCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred CCceEEecCCEEEEEeeccCCCCCcEEEecccccccccCCCCEEEEeCCeeEEEEEEE--ECCeEEEEEecCeEecCCcc
Q 008172 167 PNSVKVEEDSIWLFTAIKFEGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEK--VGNDLRCKCTDPGVFLPRAK 244 (575)
Q Consensus 167 ~~~i~l~~G~~v~lt~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~--~~~~i~~~V~~gG~l~s~K~ 244 (575)
+ ++.|++|++|+|+.++..+ +++.+++||++|++++++||+||+|||+|+|+|.++ .++.+.|+|.+||.|+++||
T Consensus 81 ~-~i~l~~G~~~~l~~~~~~g-~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~i~~~v~~gg~l~~~Kg 158 (587)
T 2e28_A 81 G-AIELKEGSKLVISMSEVLG-TPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVLKNKKG 158 (587)
T ss_dssp S-CBCCCSSCEEEEESSCCCC-CSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEETTTTEEEEECCSCCCBCSSCB
T ss_pred C-cEEEecCCEEEEEecCcCC-CCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEecCCCeEEEEEecCCEEcCCce
Confidence 3 6999999999999876444 457999999999999999999999999999999999 88999999999999999999
Q ss_pred cccccCcccccccccCCCCCccCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHH
Q 008172 245 LSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFE 324 (575)
Q Consensus 245 vn~~r~g~~~~~~~~lp~lsekD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nld 324 (575)
||+ ||..+++|.|||||++||+|++++|+|||++|||++++|++++|+++.++|.+++.||+|||+++|++|||
T Consensus 159 vnl------Pg~~~~lp~ltekD~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nld 232 (587)
T 2e28_A 159 VNV------PGVKVNLPGITEKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANID 232 (587)
T ss_dssp EEC------TTSCCCCCSCCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHH
T ss_pred eec------CCCcCCCCCCCcccHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHH
Confidence 997 57889999999999999999999999999999999999999999999988745899999999999999999
Q ss_pred HHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEe
Q 008172 325 EIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALML 404 (575)
Q Consensus 325 eI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmL 404 (575)
||++++|||||||||||+|+|+|+||.+||+|+++|+++|||||+||||||||++||+|||||++||||||+||+||+||
T Consensus 233 eIl~~~DgImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavML 312 (587)
T 2e28_A 233 EILEAADGLMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVML 312 (587)
T ss_dssp HHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHhCCEEEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcCCcEEEEEcCChhH
Q 008172 405 SGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHM 484 (575)
Q Consensus 405 s~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~AkaIVVfT~SG~T 484 (575)
|||||.|+||+|||++|++||+++|+.+.+...+... . ...+.+..+++|.+|+++|++++|++||+||.||+|
T Consensus 313 SgETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~--~----~~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~t 386 (587)
T 2e28_A 313 SGETAAGQYPVEAVKTMHQIALRTEQALEHRDILSQR--T----KESQTTITDAIGQSVAHTALNLDVAAIVTPTVSGKT 386 (587)
T ss_dssp SHHHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHH--H----TTCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHH
T ss_pred cccccCCCCHHHHHHHHHHHHHHHhhhhhhhhHhhhh--h----cccccchHHHHHHHHHHHHHhCCCCEEEEECCCcHH
Confidence 9999999999999999999999999864432112111 0 111235789999999999999999999999999999
Q ss_pred HHHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCC-CCCc
Q 008172 485 ASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPA-HVTS 563 (575)
Q Consensus 485 Ar~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~~~~~g~~k~GD~VVvv~G~~~~-~g~t 563 (575)
|+++|||||.+||||+|++++++|||+|+|||+|+++++..+.+++++.+++++++.|++++||.|++++|+|.+ .|.|
T Consensus 387 a~~isr~Rp~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~G~~k~GD~VVItqG~P~g~~G~T 466 (587)
T 2e28_A 387 PQMVAKYRPKAPIIAVTSNEAVSRRLALVWGVYTKEAPHVNTTDEMLDVAVDAAVRSGLVKHGDLVVITAGVPVGETGST 466 (587)
T ss_dssp HHHHHHTCCSSCEEEEESSHHHHHHGGGSTTEEEEECCCCCSHHHHHHHHHHHHHHHTCCCTTCEEEEEECSSCSSCCCC
T ss_pred HHHHHhcCCCCCEEEECCCHHHHHHHHHhcCceEEeccccCCHHHHHHHHHHHHHhCCcccccceEEEecCcccCcCCCC
Confidence 999999999999999999999999999999999999998889999999999999999999999999999999975 6777
Q ss_pred cccceEEEEEc
Q 008172 564 TAFQSIQVKTI 574 (575)
Q Consensus 564 ~~~~~i~v~~v 574 (575)
|++++.++
T Consensus 467 ---N~LkI~~V 474 (587)
T 2e28_A 467 ---NLMKVHVI 474 (587)
T ss_dssp ---CEEEEEEC
T ss_pred ---ceEEEEEE
Confidence 99999765
No 9
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=6.2e-130 Score=1049.00 Aligned_cols=444 Identities=24% Similarity=0.375 Sum_probs=423.0
Q ss_pred CCCCceEEEecCCCCCCHH--HHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeCCCCeEEEEec
Q 008172 87 GLRKTKMVCTIGPACCSME--DLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTEGSQIHVVDH 164 (575)
Q Consensus 87 ~~r~tkIi~TiGPas~~~e--~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~GpkIRtG~~ 164 (575)
++|+|||||||||+|+++| +|++|+++ |||||||||||++|+|+++++++|++++++|+|++||+||||||||||.+
T Consensus 13 ~~r~TKIv~TiGPas~~~e~~~l~~li~a-mnv~RlNfSHg~~e~h~~~i~~iR~~~~~~g~~vaIl~Dl~GPkIR~g~~ 91 (461)
T 3qtg_A 13 ARNLTKRVATLGPSTDVLRPDELIKFLDL-VDGVRINLAHASPNEVKFRIEAVRSYEKAKNRPLAVIVDLKGPSIRVGST 91 (461)
T ss_dssp CSCSSEEEEECSHHHHTCCHHHHHHHHTT-CSEEEEETTTCCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCCBCCBC
T ss_pred ccCCceEEEeeCCCccCchHHHHHHHHHh-CCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCceEEEEeCCCCEEEECCC
Confidence 5799999999999999999 99999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEecCCEEEEEeeccCCCCCcEEEecccccccccCCCCEEEEeCCeeEEEEEEEECCeEEEEEecCeEecCCcc
Q 008172 165 GEPNSVKVEEDSIWLFTAIKFEGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAK 244 (575)
Q Consensus 165 ~~~~~i~l~~G~~v~lt~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~~~~i~~~V~~gG~l~s~K~ 244 (575)
. ++.|++|++|+|+.++..++ +.++++|++|+++|++||.||+|||+|+|+|.++.++.+.|+|.+||.|+++||
T Consensus 92 ~---~v~L~~G~~~~lt~~~~~~~--~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~~~V~~gG~L~~~Kg 166 (461)
T 3qtg_A 92 S---PINVQEGEVVKFKLSDKSDG--TYIPVPNKAFFSAVEQNDVILMLDGRLRLKVTNTGSDWIEAVAESSGVITGGKA 166 (461)
T ss_dssp S---CEEECTTCEEEEEECSBCCS--SSEEECCHHHHHHCCTTCEEEEGGGTEEEEEEEECSSEEEEEESSCEEECTTCB
T ss_pred C---CEEEeCCCEEEEEecCCCCC--cEEEcchHHHHhhcCCCCEEEEeCCEEEEEEEEEECCEEEEEEEECCEecCCCc
Confidence 4 39999999999998876664 689999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccccccccCCCCCccCHHHHH--HHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhc
Q 008172 245 LSFRRNGILVERNHGLPTLSKKDWDDIE--FGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQK 322 (575)
Q Consensus 245 vn~~r~g~~~~~~~~lp~lsekD~~di~--~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~n 322 (575)
||+ ||..+++|.|||||++||+ |++++|+|||++|||++++|++++|++++++| .++.||||||+++|++|
T Consensus 167 vNl------Pg~~~~lp~lTekD~~dl~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g-~~~~iiaKIE~~eav~n 239 (461)
T 3qtg_A 167 IVV------EGKDYDISTPAEEDVEALKAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELG-FQSQVAVKIETKGAVNN 239 (461)
T ss_dssp EEE------TTCCCCCCSSCHHHHHHHHHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTT-CCCEEEEEECSHHHHHT
T ss_pred eec------CCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcC-CCceEEEEECCHHHHHh
Confidence 996 5788999999999999999 99999999999999999999999999999887 67999999999999999
Q ss_pred HHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceE
Q 008172 323 FEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADAL 402 (575)
Q Consensus 323 ldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~v 402 (575)
+|||++++|||||||||||+|+|.++||.+||+|+++|+++|||||+||||||||++||+|||||++||||||+||+||+
T Consensus 240 ldeIl~~sDgImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDav 319 (461)
T 3qtg_A 240 LEELVQCSDYVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSL 319 (461)
T ss_dssp HHHHHHTCSEEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHhcccEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCcCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcCCcEEEEEcCCh
Q 008172 403 MLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHG 482 (575)
Q Consensus 403 mLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~AkaIVVfT~SG 482 (575)
|||||||.|+||+|||++|++||+++|++..+. ..+.+..+++|.+|+++|++++|+ ||+||.||
T Consensus 320 MLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~--------------~~~~~~~~aia~aa~~~a~~~~a~-Iv~~T~SG 384 (461)
T 3qtg_A 320 WLTNETASGKYPLAAVSWLSRILMNVEYQIPQS--------------PLLQNSRDRFAKGLVELAQDLGAN-ILVFSMSG 384 (461)
T ss_dssp EECHHHHTSSCHHHHHHHHHHHHHTCCCCCCCC--------------CCCCSHHHHHHHHHHHHHHHHTCE-EEEECSSS
T ss_pred EEcccccCCCCHHHHHHHHHHHHHHHHhhhhhc--------------cCCCCHHHHHHHHHHHHHHhcCCC-EEEECCCc
Confidence 999999999999999999999999999864210 123467899999999999999999 99999999
Q ss_pred hHHHHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCC
Q 008172 483 HMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVT 562 (575)
Q Consensus 483 ~TAr~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~~~~~g~~k~GD~VVvv~G~~~~~g~ 562 (575)
+||+++|||||.+||||+|++++++|||+|+|||+|++++ ..+.|++++.+++++++.| ||+++|.| |+
T Consensus 385 ~tA~~vsr~RP~~pIia~T~~~~~~r~l~l~~GV~p~~~~-~~~~d~~~~~a~~~~~~~g-------vvit~g~p---~~ 453 (461)
T 3qtg_A 385 TLARRIAKFRPRGVVYVGTPNVRVARSLSIVWALEPLYIP-AENYEEGLEKLISLKGTTP-------FVATYGIR---GG 453 (461)
T ss_dssp HHHHHHHTTCCSSCEEEEESCHHHHHHHTTSTTEEEEECC-CSSHHHHHHHHHHHHCCSS-------EEEEECCT---TS
T ss_pred HHHHHHHhhCCCCCEEEeCCCHHHHhhceeccceEEEEeC-CCCHHHHHHHHHHHHHHCC-------EEEEeccC---CC
Confidence 9999999999999999999999999999999999999998 7889999999999999888 88888876 56
Q ss_pred ccccceEEEE
Q 008172 563 STAFQSIQVK 572 (575)
Q Consensus 563 t~~~~~i~v~ 572 (575)
| |+|||+
T Consensus 454 T---N~~~v~ 460 (461)
T 3qtg_A 454 V---HSVKVK 460 (461)
T ss_dssp C---CEEEEE
T ss_pred C---eEEEEE
Confidence 6 999986
No 10
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=5.1e-129 Score=1057.51 Aligned_cols=487 Identities=30% Similarity=0.446 Sum_probs=446.5
Q ss_pred ccccccccccccchhhhhhcccCCCCCceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhh
Q 008172 64 NKHGLSLGFDAVSEGELREKGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHE 143 (575)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~r~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~ 143 (575)
.+|+|.|++++. ..+|+|||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|+++++
T Consensus 4 ~~~~~~~~~~~~----------~~~r~tkIv~TlGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~ir~~~~~ 73 (500)
T 1a3w_A 4 LERLTSLNVVAG----------SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEEL 73 (500)
T ss_dssp HHHHHCC---------------CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhcCcccc----------ccCCCcEEEEEcCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 478899988773 3478999999999999999999999999999999999999999999999999999999
Q ss_pred cC-CceEEEEeCCCCeEEEEecCCCCceEEecCCEEEEEeecc--CCCCCcEEEecccccccccCCCCEEEEeCCeeEEE
Q 008172 144 KL-FCISVMIDTEGSQIHVVDHGEPNSVKVEEDSIWLFTAIKF--EGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFE 220 (575)
Q Consensus 144 ~~-~~i~Il~Dl~GpkIRtG~~~~~~~i~l~~G~~v~lt~~~~--~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~ 220 (575)
+| +|++||+||||||||||.+.++.++.|++|++|+|+.+.. ..++++.+++||++|+++|++||.||+|||+|+|+
T Consensus 74 ~~~~~v~il~Dl~GPkiR~g~~~~~~~v~l~~G~~~~lt~~~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~ 153 (500)
T 1a3w_A 74 YPGRPLAIALDTKGPEIRTGTTTNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQ 153 (500)
T ss_dssp CCSSCCCCEEECCCSCCBBCCCSSSSCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEEETTTTEEEE
T ss_pred cCCcceEEEEeCCCCEEEEeecCCCCceEeecCCEEEEEeCCcccCCCCCcEEEechHHHHhhcCCCCEEEEeCCEEEEE
Confidence 99 9999999999999999999765579999999999998752 22345789999999999999999999999999999
Q ss_pred EEEE-ECCeEEEEEecCeEecCCcccccccCcccccccccCCCCCccCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHH
Q 008172 221 VIEK-VGNDLRCKCTDPGVFLPRAKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKY 299 (575)
Q Consensus 221 V~~~-~~~~i~~~V~~gG~l~s~K~vn~~r~g~~~~~~~~lp~lsekD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~ 299 (575)
|.++ .++.+.|+|++||.|+++||||+ ||..+++|+||++|.+||+|+++.|+|+|++|||++++|+++++++
T Consensus 154 V~~~~~~~~v~~~v~~gG~L~~~KgvNl------Pg~~~~lp~lt~~D~~DI~~~l~~g~d~I~lpfV~saeDv~~~~~~ 227 (500)
T 1a3w_A 154 VLEVVDDKTLKVKALNAGKICSHKGVNL------PGTDVDLPALSEKDKEDLRFGVKNGVHMVFASFIRTANDVLTIREV 227 (500)
T ss_dssp CCBCCC--CEEEEBCSCCCCCSSCBEEC------TTCCCCCCSSCHHHHHHHHHHHHHTCSEEEECSCCSHHHHHHHHHH
T ss_pred EEEEccCCeEEEEEecCCEEeCCCCCcC------CCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHH
Confidence 9999 89999999999999999999996 5788999999999999999999999999999999999999999999
Q ss_pred HhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhc
Q 008172 300 VSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVE 379 (575)
Q Consensus 300 l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~ 379 (575)
+.+.+ .++.||+|||+++|++|+|||++++|||||||||||+|+|.++++.+|++|+.+|+++|||+|+||||||||+.
T Consensus 228 l~~~~-~~i~IiakIEt~eav~nldeI~~~~DgImvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~ 306 (500)
T 1a3w_A 228 LGEQG-KDVKIIVKIENQQGVNNFDEILKVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTY 306 (500)
T ss_dssp HHHHH-TTSEEEEEECSSHHHHSHHHHHHHSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGS
T ss_pred HHhcC-CCcEEEEEECChHHHHhHHHHHHhCCEEEECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhcc
Confidence 98876 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHhhhcccccCCCCCCchhhHH
Q 008172 380 YPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQI 459 (575)
Q Consensus 380 ~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 459 (575)
+|.|||||++|++||+.+|+|++|||+||+.|+||+|||++|++||+++|+.+.+...+... ... ...+.+..+++
T Consensus 307 ~~~ptraEvsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~---~~~-~~~~~~~~~ai 382 (500)
T 1a3w_A 307 NPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDM---RNC-TPKPTSTTETV 382 (500)
T ss_dssp CSSCCHHHHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHHHHHHHH---TTS-CCSSCCHHHHH
T ss_pred CCCchHHHHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhhhHHHhh---hhc-cccccchHHHH
Confidence 99999999999999999999999999999999999999999999999999865433222211 110 01123568999
Q ss_pred HHHHHHHHHhcCCcEEEEEcCChhHHHHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecC------CCCHHHHHHH
Q 008172 460 CNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNL------SDDMETNIAK 533 (575)
Q Consensus 460 a~~av~~a~~~~AkaIVVfT~SG~TAr~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~------~~d~d~~i~~ 533 (575)
|.+|+++|++++|++||+||.||+||+++|||||.+||||+|++++++|||+|+|||+|++++. ..+.+++++.
T Consensus 383 a~aa~~~a~~~~a~aIv~~T~sG~ta~~isr~RP~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~~~~~ 462 (500)
T 1a3w_A 383 AASAVAAVFEQKAKAIIVLSTSGTTPRLVSKYRPNCPIILVTRCPRAARFSHLYRGVFPFVFEKEPVSDWTDDVEARINF 462 (500)
T ss_dssp HHHHHHHHHHHTCSCEEEECSSSHHHHHHHHTCCSSCEEEEESCTTHHHHGGGSTTEEEEECCSCCCSCTTTHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEECCCchHHHHHHhhCCCCCEEEEcCCHHHHHhhhhhCCeEEEEecccccccccCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999975 5678999999
Q ss_pred HHHHHHHcCCCCCCCEEEEEecCCCCCCCccccceEEEEEc
Q 008172 534 TIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQVKTI 574 (575)
Q Consensus 534 al~~~~~~g~~k~GD~VVvv~G~~~~~g~t~~~~~i~v~~v 574 (575)
++++++++|++++||.||+++|+|.|+|+| |+|||++|
T Consensus 463 a~~~~~~~g~~~~GD~vvv~~g~~~~~g~t---n~~~v~~v 500 (500)
T 1a3w_A 463 GIEKAKEFGILKKGDTYVSIQGFKAGAGHS---NTLQVSTV 500 (500)
T ss_dssp HHHHHHHTTCSCTTCEEEEEECCCTTTCCC---CEEEEEEC
T ss_pred HHHHHHHCCCCCCcCEEEEEecccCCCCCC---ceEEEEEC
Confidence 999999999999999999999999888877 99999875
No 11
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.73 E-value=2.2e-18 Score=180.48 Aligned_cols=150 Identities=13% Similarity=0.165 Sum_probs=129.1
Q ss_pred CHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhc-----cC--------------------------CCCceEEeeec
Q 008172 267 DWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSG-----KS--------------------------SRSIKVLAKIE 315 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~-----~~--------------------------~~~i~IIaKIE 315 (575)
|..+|+++++.|+++|++|||++++|++++++++.. +| +.++.|++|||
T Consensus 106 ~~~di~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIE 185 (339)
T 1izc_A 106 DEVSLSTALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIE 185 (339)
T ss_dssp CHHHHHHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEEC
T ss_pred CHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEEC
Confidence 457999999999999999999999999999998853 11 02478999999
Q ss_pred CHHHHhcHHHHHhc--CCEEEEeCCCCCCC--------CCC---CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCC
Q 008172 316 NLESLQKFEEIVEA--SDGIMVARGDLGVD--------IPL---EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPT 382 (575)
Q Consensus 316 t~~av~nldeI~~~--sDgImIaRGDLg~e--------~~~---e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~ 382 (575)
|++|++|+++|+++ +|++|||++||+.+ +|. +.+..++++++.+|+++|||++..+ +.
T Consensus 186 t~~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~---------~d 256 (339)
T 1izc_A 186 SVKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGA---------LS 256 (339)
T ss_dssp SHHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEEC---------SS
T ss_pred hHHHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEec---------CC
Confidence 99999999999986 99999999999999 876 6788999999999999999997654 22
Q ss_pred CChhhHhhHHHHHHcccceEEeccCcCC--CCCHHHHHHHHHHHHHHHhhh
Q 008172 383 PTRAEVADVSEAVRQYADALMLSGESAI--GPFGQKAVSVLQMASSRMELW 431 (575)
Q Consensus 383 PtrAEv~Dv~nav~~G~D~vmLs~ETa~--G~yPveaV~~m~~I~~~aE~~ 431 (575)
| .++.+++.+|+|+++++.++.. +.| .+.|+++++|+.++|..
T Consensus 257 ~-----~~a~~~~~~Gf~~l~~~~di~~l~~~~-~~~v~~a~~iv~a~e~~ 301 (339)
T 1izc_A 257 V-----DMVPSLIEQGYRAIAVQFDVWGLSRLV-HGSLAQARASAKQFAGQ 301 (339)
T ss_dssp G-----GGHHHHHHTTEEEEEEEEHHHHHHHHH-HHHHHHHHHHHGGGCC-
T ss_pred H-----HHHHHHHHhCCCEEEecHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 3 5778899999999999998876 666 78899999998887764
No 12
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.67 E-value=2.5e-18 Score=174.52 Aligned_cols=129 Identities=16% Similarity=0.246 Sum_probs=107.1
Q ss_pred ccCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhc-----cC---------------------CCCceEEeeecCHH
Q 008172 265 KKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSG-----KS---------------------SRSIKVLAKIENLE 318 (575)
Q Consensus 265 ekD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~-----~~---------------------~~~i~IIaKIEt~~ 318 (575)
..|..+|+++++.|+|+|++|||+|++|++++.+.+.. +| ++++.+++||||++
T Consensus 77 ~~~~~~i~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~ 156 (267)
T 2vws_A 77 EGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKT 156 (267)
T ss_dssp SCCHHHHHHHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHH
T ss_pred CCCHHHHHHHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHH
Confidence 34678999999999999999999999999999887641 11 02378999999999
Q ss_pred HHhcHHHHHhc--CCEEEEeCCCCCCCCCC------CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhh
Q 008172 319 SLQKFEEIVEA--SDGIMVARGDLGVDIPL------EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVAD 390 (575)
Q Consensus 319 av~nldeI~~~--sDgImIaRGDLg~e~~~------e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~D 390 (575)
|++|+++|+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ . .| ..
T Consensus 157 av~~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~~-------~--d~-----~~ 222 (267)
T 2vws_A 157 ALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLA-------V--AP-----DM 222 (267)
T ss_dssp HHHTHHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEEC-------S--SH-----HH
T ss_pred HHHHHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEec-------C--CH-----HH
Confidence 99999999998 99999999999999986 4578888999999999999998732 1 22 23
Q ss_pred HHHHHHcccceEEeccC
Q 008172 391 VSEAVRQYADALMLSGE 407 (575)
Q Consensus 391 v~nav~~G~D~vmLs~E 407 (575)
....+.+|++.+..+.+
T Consensus 223 a~~~~~~G~~~~s~~~d 239 (267)
T 2vws_A 223 AQQCLAWGANFVAVGVD 239 (267)
T ss_dssp HHHHHHTTCCEEEEEEH
T ss_pred HHHHHHCCCCEEEEchH
Confidence 35577889988888744
No 13
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.66 E-value=4.5e-18 Score=174.47 Aligned_cols=129 Identities=18% Similarity=0.213 Sum_probs=107.5
Q ss_pred ccCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhc-----cC---------------------CCCceEEeeecCHH
Q 008172 265 KKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSG-----KS---------------------SRSIKVLAKIENLE 318 (575)
Q Consensus 265 ekD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~-----~~---------------------~~~i~IIaKIEt~~ 318 (575)
+.|..+|+++++.|+++|++|||+|++|++++.+.+.. +| +.++.+++||||++
T Consensus 98 ~~d~~di~~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~ 177 (287)
T 2v5j_A 98 WNDPVQIKQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETRE 177 (287)
T ss_dssp SSCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHH
T ss_pred CCCHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHH
Confidence 56677999999999999999999999999999887641 11 02478999999999
Q ss_pred HHhcHHHHHhc--CCEEEEeCCCCCCCCCC------CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhh
Q 008172 319 SLQKFEEIVEA--SDGIMVARGDLGVDIPL------EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVAD 390 (575)
Q Consensus 319 av~nldeI~~~--sDgImIaRGDLg~e~~~------e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~D 390 (575)
|++|+++|+++ +|++|||++||+.+++. +.+..++++++.+|+++|||+++.+ ..|. .
T Consensus 178 av~n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~~---------~d~~-----~ 243 (287)
T 2v5j_A 178 AMKNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILI---------ANEQ-----L 243 (287)
T ss_dssp HHHTHHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEEC---------CCHH-----H
T ss_pred HHHHHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEec---------CCHH-----H
Confidence 99999999986 89999999999999986 5578888999999999999998732 2332 3
Q ss_pred HHHHHHcccceEEeccC
Q 008172 391 VSEAVRQYADALMLSGE 407 (575)
Q Consensus 391 v~nav~~G~D~vmLs~E 407 (575)
...++.+|++.+.++.+
T Consensus 244 a~~~~~~G~~~~s~~~d 260 (287)
T 2v5j_A 244 AKRYLELGALFVAVGVD 260 (287)
T ss_dssp HHHHHHTTCSEEEEEEH
T ss_pred HHHHHHhCCCEEEECcH
Confidence 35567889998888754
No 14
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.61 E-value=6.5e-17 Score=163.07 Aligned_cols=130 Identities=17% Similarity=0.218 Sum_probs=109.0
Q ss_pred ccCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhc-----cC--------------------CCCceEEeeecCHHH
Q 008172 265 KKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSG-----KS--------------------SRSIKVLAKIENLES 319 (575)
Q Consensus 265 ekD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~-----~~--------------------~~~i~IIaKIEt~~a 319 (575)
+.|..+|+++++.|+++|++|||++++|++++.+.+.. +| +.++.++++|||++|
T Consensus 78 ~~~~~~i~~~l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~a 157 (256)
T 1dxe_A 78 TNEPVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQG 157 (256)
T ss_dssp SSCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHH
T ss_pred CCCHHHHHHHHhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHH
Confidence 45677799999999999999999999999999988741 00 146899999999999
Q ss_pred HhcHHHHHhc--CCEEEEeCCCCCCCCCC------CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhH
Q 008172 320 LQKFEEIVEA--SDGIMVARGDLGVDIPL------EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADV 391 (575)
Q Consensus 320 v~nldeI~~~--sDgImIaRGDLg~e~~~------e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv 391 (575)
+.|+++|+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ ..| .+.
T Consensus 158 v~~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~~---------~d~-----~~~ 223 (256)
T 1dxe_A 158 VDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILA---------PVE-----ADA 223 (256)
T ss_dssp HHTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEEC---------CSH-----HHH
T ss_pred HHhHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEec---------CCH-----HHH
Confidence 9999999985 99999999999999986 4588899999999999999998632 122 234
Q ss_pred HHHHHcccceEEeccCc
Q 008172 392 SEAVRQYADALMLSGES 408 (575)
Q Consensus 392 ~nav~~G~D~vmLs~ET 408 (575)
..++..|++.+.++.++
T Consensus 224 ~~~~~~G~~~~s~~~d~ 240 (256)
T 1dxe_A 224 RRYLEWGATFVAVGSDL 240 (256)
T ss_dssp HHHHHTTCCEEEEEEHH
T ss_pred HHHHHcCCCEEEechHH
Confidence 66788999999888553
No 15
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.60 E-value=1.6e-15 Score=153.50 Aligned_cols=130 Identities=16% Similarity=0.226 Sum_probs=109.2
Q ss_pred cCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhc-----cC---------------------CCCceEEeeecCHHH
Q 008172 266 KDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSG-----KS---------------------SRSIKVLAKIENLES 319 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~-----~~---------------------~~~i~IIaKIEt~~a 319 (575)
.|..||+++++.|+|+|++|||+|++|++++.+.++. +| +.++.++++|||++|
T Consensus 76 ~~~~di~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~a 155 (261)
T 3qz6_A 76 VDRAHVQRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKA 155 (261)
T ss_dssp CCHHHHHHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHH
T ss_pred CCHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHH
Confidence 3557999999999999999999999999999988742 10 146899999999999
Q ss_pred HhcHHHHHhc--CCEEEEeCCCCCCCCCC------CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhH
Q 008172 320 LQKFEEIVEA--SDGIMVARGDLGVDIPL------EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADV 391 (575)
Q Consensus 320 v~nldeI~~~--sDgImIaRGDLg~e~~~------e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv 391 (575)
+.|+++|+++ +|+++||++||+.+++. +.+..++++++.+|+++|||+++.+ ..|..++
T Consensus 156 v~~~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~---------~~~~~~~---- 222 (261)
T 3qz6_A 156 VEDIDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFT---------AADAAKM---- 222 (261)
T ss_dssp HHTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEE---------SSCGGGG----
T ss_pred HHHHHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe---------CCHHHHH----
Confidence 9999999965 89999999999999986 3688999999999999999998853 2454442
Q ss_pred HHHHHcccceEEeccCc
Q 008172 392 SEAVRQYADALMLSGES 408 (575)
Q Consensus 392 ~nav~~G~D~vmLs~ET 408 (575)
...+..|++.+.++.++
T Consensus 223 ~~~~~~G~~~~s~~~D~ 239 (261)
T 3qz6_A 223 GWAVERGAQMLLWSGDV 239 (261)
T ss_dssp HHHHHTTCCEEEEEEHH
T ss_pred HHHHHCCCCEEEEhhHH
Confidence 34478999999998764
No 16
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=99.48 E-value=2.8e-14 Score=145.74 Aligned_cols=137 Identities=12% Similarity=0.060 Sum_probs=108.9
Q ss_pred CCCCC-ccCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc--CCEEEEe
Q 008172 260 LPTLS-KKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA--SDGIMVA 336 (575)
Q Consensus 260 lp~ls-ekD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~--sDgImIa 336 (575)
++.++ +.+..||++.++ |+|+|++|+|++++|++++++.+...| .++.++++|||++|+.|+++|++. +|++++|
T Consensus 75 v~~~~~~~~~~dl~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g-~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG 152 (284)
T 1sgj_A 75 VNALHSPYFEDDLSVLTP-ELSGVVVPKLEMGAEARQVAQMLQERS-LPLPILAGLETGAGVWNAREIMEVPEVAWAYFG 152 (284)
T ss_dssp CCCTTSTTHHHHGGGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTT-CCCCEEEEECSHHHHHTHHHHHTSTTEEEEEEC
T ss_pred eCCCCCHhHHHHHHHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcC-CCeEEEEEecCHHHHHHHHHHHcCCCCcEEEEC
Confidence 33444 567789999999 999999999999999999999997664 578999999999999999999974 8999999
Q ss_pred CCCCCCCCCC------CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEe
Q 008172 337 RGDLGVDIPL------EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALML 404 (575)
Q Consensus 337 RGDLg~e~~~------e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmL 404 (575)
++||+.+++. +.+..++++++.+|+++|||++-. +. ....-...=..+...+...|+|+-+.
T Consensus 153 ~~DL~~~lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~i~~--v~----~~~~d~~~l~~~~~~~~~~Gf~Gk~~ 220 (284)
T 1sgj_A 153 AEDYTTDLGGKRTPGGLEVLYARSQVALAARLTGVAALDI--VV----TALNDPETFRADAEQGRALGYSGKLC 220 (284)
T ss_dssp HHHHHHHHTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEEC--CC----CCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHcCCCeeeC--Cc----CCCCCHHHHHHHHHHHHhCCCCcccc
Confidence 9999999987 679999999999999999998521 00 00000000114556678899986554
No 17
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=99.22 E-value=2.1e-11 Score=127.03 Aligned_cols=136 Identities=15% Similarity=0.160 Sum_probs=109.7
Q ss_pred cCCCCCccCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhc-------cCC---CCceEEeeecCHHHHhcHHHHHh
Q 008172 259 GLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSG-------KSS---RSIKVLAKIENLESLQKFEEIVE 328 (575)
Q Consensus 259 ~lp~lsekD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~-------~~~---~~i~IIaKIEt~~av~nldeI~~ 328 (575)
.-|.+-+.|...|..+++.|.+.|++|||++++|++++++++.. .|. +++.++++||++.|+.|+|+|++
T Consensus 116 ~~p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~ 195 (324)
T 2xz9_A 116 DRPDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAK 195 (324)
T ss_dssp HCHHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTT
T ss_pred cchhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHH
Confidence 44566677788999999999999999999999998888887741 221 36899999999999999999999
Q ss_pred cCCEEEEeCCCCCC-CCC---------------CCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHH
Q 008172 329 ASDGIMVARGDLGV-DIP---------------LEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVS 392 (575)
Q Consensus 329 ~sDgImIaRGDLg~-e~~---------------~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~ 392 (575)
++|+++||..||+. .++ .+.|..+.++++.+|+++|||+++++++- ..| ..+.
T Consensus 196 ~vD~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~~------~dp-----~~~~ 264 (324)
T 2xz9_A 196 EVDFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEMA------GDP-----LAAV 264 (324)
T ss_dssp TCSEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGG------GCH-----HHHH
T ss_pred hCcEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCccC------CCH-----HHHH
Confidence 99999999999985 333 24566777899999999999999987742 123 3345
Q ss_pred HHHHcccceEEec
Q 008172 393 EAVRQYADALMLS 405 (575)
Q Consensus 393 nav~~G~D~vmLs 405 (575)
.++..|+|.+..+
T Consensus 265 ~l~~lG~~~~si~ 277 (324)
T 2xz9_A 265 ILLGLGLDEFSMS 277 (324)
T ss_dssp HHHHHTCCEEEEC
T ss_pred HHHHCCCCEEEEC
Confidence 6788999997555
No 18
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=99.01 E-value=1.7e-10 Score=132.97 Aligned_cols=134 Identities=16% Similarity=0.159 Sum_probs=110.8
Q ss_pred CCccCHHHHHHHHH-cC--CCEEEecCcCChhhHHHHHHHHhccCC---CC-ceEEeeecCHHHHhcHHHHHhcCCEEEE
Q 008172 263 LSKKDWDDIEFGIA-EG--VDFIAMSFVCDADSVRHLKKYVSGKSS---RS-IKVLAKIENLESLQKFEEIVEASDGIMV 335 (575)
Q Consensus 263 lsekD~~di~~al~-~g--vd~I~~SfV~sa~dv~~ir~~l~~~~~---~~-i~IIaKIEt~~av~nldeI~~~sDgImI 335 (575)
+-+-+.+.|..+.+ .| .+.|++|||++++|++++++.+...+. .+ +.++++||++.|+.|+|+|++++|+++|
T Consensus 622 ~~~~ql~Ai~ra~~~~G~~~~~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~si 701 (794)
T 2ols_A 622 CFALECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFSI 701 (794)
T ss_dssp HHHHHHHHHHHHHHTSCCTTEEEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEEE
Confidence 33456778888998 68 899999999999999999999976552 23 8899999999999999999999999999
Q ss_pred eCCCCCCC-CCC---------------CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHccc
Q 008172 336 ARGDLGVD-IPL---------------EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYA 399 (575)
Q Consensus 336 aRGDLg~e-~~~---------------e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~ 399 (575)
|..||+.. ++. +.|..+.++++++|+++|||++++.|+--. .|.. +..++..|+
T Consensus 702 GtnDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgicGe~~~~-----dp~~-----~~~~~~~G~ 771 (794)
T 2ols_A 702 GSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGICGQGPSD-----HPDF-----AKWLVEEGI 771 (794)
T ss_dssp EHHHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEEESSHHHH-----CHHH-----HHHHHHHTC
T ss_pred CHHHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEEecccCCC-----CHHH-----HHHHHHCCC
Confidence 99999987 664 346677789999999999999998876420 2322 456788999
Q ss_pred ceEEecc
Q 008172 400 DALMLSG 406 (575)
Q Consensus 400 D~vmLs~ 406 (575)
|.+.++.
T Consensus 772 ~~~s~~p 778 (794)
T 2ols_A 772 ESVSLNP 778 (794)
T ss_dssp CEEEECG
T ss_pred CEEEECH
Confidence 9998863
No 19
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=98.96 E-value=9e-10 Score=114.31 Aligned_cols=126 Identities=17% Similarity=0.257 Sum_probs=100.6
Q ss_pred HHHHHHHHHcCC--CEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc---CCEEEEeCCCCCC
Q 008172 268 WDDIEFGIAEGV--DFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA---SDGIMVARGDLGV 342 (575)
Q Consensus 268 ~~di~~al~~gv--d~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~---sDgImIaRGDLg~ 342 (575)
..||+..++.|. |+|++|.|++++|++.+.+.+...+ .++.++++|||++|+.|+++|++. .|++++|..||..
T Consensus 117 ~~Dl~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~-~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G~~DL~~ 195 (316)
T 3qll_A 117 IEDIHALLECGSLPDYLVLPKTESAAHLQILDRLMMFAG-SDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGAADMAA 195 (316)
T ss_dssp HHHHHHHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC---CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEECHHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEECHHHHHH
Confidence 578888899885 9999999999999999999997665 578999999999999999999993 7999999999999
Q ss_pred CCCCC----ChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhh----HhhHHHHHHcccceEEe
Q 008172 343 DIPLE----QIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAE----VADVSEAVRQYADALML 404 (575)
Q Consensus 343 e~~~e----~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAE----v~Dv~nav~~G~D~vmL 404 (575)
+++.. .+..+..+++.+|+++|++++ .+ +.+.... ..++..+...|+++-+.
T Consensus 196 ~lG~~~~~~~l~~ar~~iv~AaraaGi~~i-d~---------v~~~~~D~~gl~~e~~~~r~lGf~Gk~~ 255 (316)
T 3qll_A 196 DIGAASTWEPLALARARLVSACAMNGIPAI-DA---------PFFDVHDVSGLQSETLRASDFGFSAKAA 255 (316)
T ss_dssp HHTCCSSHHHHHHHHHHHHHHHHHHTCCEE-EC---------CCSCSSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HhCCCCCcHHHHHHHHHHHHHHHHcCCcee-ec---------cccCcCCHHHHHHHHHHHHHCCCCeEEe
Confidence 99863 355666799999999999984 22 1122111 34666778899986444
No 20
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=98.93 E-value=1.6e-09 Score=110.25 Aligned_cols=122 Identities=16% Similarity=0.091 Sum_probs=95.3
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc--CCEEEEeCCCCCCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA--SDGIMVARGDLGVDIP 345 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~--sDgImIaRGDLg~e~~ 345 (575)
..||+..++.|+|+|.+|.|++++|++.+. .+.++++|||++|+.|+++|+.. .|++++|+.||+.+++
T Consensus 74 ~~dl~~~~~~g~~gi~lPKv~s~~~v~~~~---------~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl~~~lG 144 (273)
T 1u5h_A 74 ARDLEALAGTAYTTVMLPKAESAAQVIELA---------PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIATLG 144 (273)
T ss_dssp HHHHHHHHTSCCCEEEETTCCCHHHHHTTT---------TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEeCCCCCHHHHHHHh---------hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHHHHHhC
Confidence 367888899999999999999999999763 57899999999999999999976 7999999999999887
Q ss_pred CCC-----------hHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhh-HhhHHHHHHcccceEEec
Q 008172 346 LEQ-----------IPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAE-VADVSEAVRQYADALMLS 405 (575)
Q Consensus 346 ~e~-----------v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAE-v~Dv~nav~~G~D~vmLs 405 (575)
... +..+..+++.+|+++|++.+- +- .....+.+- ..+...+...|+|+-+.-
T Consensus 145 ~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid-~v------~~~~~d~~gl~~~~~~~~~~Gf~Gk~~I 209 (273)
T 1u5h_A 145 GSSSRRADGAYRDVARHVRSTILLAASAFGRLALD-AV------HLDILDVEGLQEEARDAAAVGFDVTVCI 209 (273)
T ss_dssp CSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEE-CC------CSCTTCHHHHHHHHHHHHHHTCSEEEES
T ss_pred CCCCCCccccccHHHHHHHHHHHHHHHHcCCCccc-CC------cCCCCCHHHHHHHHHHHHhCCCCceeec
Confidence 532 455667899999999998852 11 111111111 245677889999987663
No 21
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=98.91 E-value=1.2e-09 Score=121.63 Aligned_cols=126 Identities=16% Similarity=0.122 Sum_probs=103.4
Q ss_pred HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHh-------ccCC---CCceEEeeecCHHHHhcHHHHHhcCCEEEEeCC
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVS-------GKSS---RSIKVLAKIENLESLQKFEEIVEASDGIMVARG 338 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~-------~~~~---~~i~IIaKIEt~~av~nldeI~~~sDgImIaRG 338 (575)
..|..|.+.|...|++|||+++++++++++++. ..|. +++.+.++||++.|+.++|+|++++|++.||..
T Consensus 375 rAi~rA~~~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~siGtN 454 (575)
T 2hwg_A 375 RAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFSIGTN 454 (575)
T ss_dssp HHHHHHTTSSCEEEEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTTCSEEEECHH
T ss_pred HHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhCCEEEECHH
Confidence 668888899999999999999999888888774 2231 368999999999999999999999999999999
Q ss_pred CCCC----------CCC------CCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceE
Q 008172 339 DLGV----------DIP------LEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADAL 402 (575)
Q Consensus 339 DLg~----------e~~------~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~v 402 (575)
||+. .++ .+.|-.+.++++++|+++|||++++.++- ..|.-+ ...+..|.|.+
T Consensus 455 DLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgvCGe~a------gdp~~~-----~~l~~lG~~~~ 523 (575)
T 2hwg_A 455 DLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELA------GDERAT-----LLLLGMGLDEF 523 (575)
T ss_dssp HHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEECSTTT------TCTTTH-----HHHHHTTCCEE
T ss_pred HHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCCC------CCHHHH-----HHHHHCCCCEE
Confidence 9988 443 24566777899999999999999987632 245333 56788999997
Q ss_pred Eec
Q 008172 403 MLS 405 (575)
Q Consensus 403 mLs 405 (575)
..+
T Consensus 524 S~~ 526 (575)
T 2hwg_A 524 SMS 526 (575)
T ss_dssp EEC
T ss_pred EEC
Confidence 665
No 22
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=98.87 E-value=2.6e-09 Score=118.76 Aligned_cols=126 Identities=13% Similarity=0.063 Sum_probs=102.8
Q ss_pred HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHh-------ccC---CCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCC
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVS-------GKS---SRSIKVLAKIENLESLQKFEEIVEASDGIMVARG 338 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~-------~~~---~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRG 338 (575)
..|..|.+.|...|++|||+++++++++++++. +.| ++++.+.++||++.|+.++|+|++++|++.||..
T Consensus 377 rAi~rA~~~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~siGtN 456 (572)
T 2wqd_A 377 RALLRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDFFSIGTN 456 (572)
T ss_dssp HHHHHHTTTSCEEEEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHHCSEEEECHH
T ss_pred HHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHHHHHHHhCCEEEECHH
Confidence 558888899999999999999999999888764 122 1368999999999999999999999999999999
Q ss_pred CCCCC-CC---------------CCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceE
Q 008172 339 DLGVD-IP---------------LEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADAL 402 (575)
Q Consensus 339 DLg~e-~~---------------~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~v 402 (575)
||+.- ++ .+.|-.+.++++++|+++|||++++.++- ..|..+ ...+..|.|.+
T Consensus 457 DLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgiCGe~a------gdp~~~-----~~l~~lG~~~~ 525 (572)
T 2wqd_A 457 DLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEMA------GDETAI-----PLLLGLGLDEF 525 (572)
T ss_dssp HHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGG------GCTTTH-----HHHHHHTCCEE
T ss_pred HHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCcc------CCHHHH-----HHHHHCCCCEE
Confidence 99832 11 24566777899999999999999987733 245544 56788999998
Q ss_pred Eec
Q 008172 403 MLS 405 (575)
Q Consensus 403 mLs 405 (575)
..+
T Consensus 526 S~~ 528 (572)
T 2wqd_A 526 SMS 528 (572)
T ss_dssp EEC
T ss_pred Eec
Confidence 776
No 23
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=98.77 E-value=1.3e-08 Score=106.37 Aligned_cols=127 Identities=11% Similarity=0.064 Sum_probs=96.5
Q ss_pred HHHHHHHHHc---CCCEEEecCcCChhhHHHHHHHHhcc----CC-CCceEEeeecCHHHHhcHHHHHhc--CCEEEEeC
Q 008172 268 WDDIEFGIAE---GVDFIAMSFVCDADSVRHLKKYVSGK----SS-RSIKVLAKIENLESLQKFEEIVEA--SDGIMVAR 337 (575)
Q Consensus 268 ~~di~~al~~---gvd~I~~SfV~sa~dv~~ir~~l~~~----~~-~~i~IIaKIEt~~av~nldeI~~~--sDgImIaR 337 (575)
..||...++. |+|+|++|.|++++|++.+.+++... |. ..+.++++|||++|+.|+++|++. .|++++|.
T Consensus 98 ~~DL~av~~~~~~g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa~~rv~~L~~G~ 177 (332)
T 3qqw_A 98 RQDVDIIVNGAGGRLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAELPNIEVLDFGL 177 (332)
T ss_dssp HHHHHHHHHHSTTCCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTTSTTEEEEEECH
T ss_pred HHHHHHHHhhcccCCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhcCcCCCEEEEcH
Confidence 4567776776 99999999999999999998887532 21 358899999999999999999954 79999999
Q ss_pred CCCCCCCCCC---------------ChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChh--h--HhhHHHHH-Hc
Q 008172 338 GDLGVDIPLE---------------QIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRA--E--VADVSEAV-RQ 397 (575)
Q Consensus 338 GDLg~e~~~e---------------~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrA--E--v~Dv~nav-~~ 397 (575)
.||..+++.. .+..+..+++.+|+++|+++|= + +.+... | -.+...+. ..
T Consensus 178 ~DL~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~id-~---------v~~d~~D~~gl~~~~~~~~~~l 247 (332)
T 3qqw_A 178 MDFVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVPAH-N---------VCLNLKDAEVIASDACRARNEF 247 (332)
T ss_dssp HHHHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEEEE-C---------CCSCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCccc-C---------CcccccCHHHHHHHHHHHHHhC
Confidence 9998888641 1445677899999999999742 1 122111 1 14456676 78
Q ss_pred ccceEEe
Q 008172 398 YADALML 404 (575)
Q Consensus 398 G~D~vmL 404 (575)
|+|+-+.
T Consensus 248 Gf~Gk~~ 254 (332)
T 3qqw_A 248 GFLRMWS 254 (332)
T ss_dssp CCCEEEE
T ss_pred CCCcccc
Confidence 9987554
No 24
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=98.71 E-value=4.5e-08 Score=102.51 Aligned_cols=101 Identities=10% Similarity=0.166 Sum_probs=82.0
Q ss_pred HHHHHHHHHc---CCCEEEecCcCChhhHHHHHHHHhcc----C-CCCceEEeeecCHHHHhcHHHHHhc--CCEEEEeC
Q 008172 268 WDDIEFGIAE---GVDFIAMSFVCDADSVRHLKKYVSGK----S-SRSIKVLAKIENLESLQKFEEIVEA--SDGIMVAR 337 (575)
Q Consensus 268 ~~di~~al~~---gvd~I~~SfV~sa~dv~~ir~~l~~~----~-~~~i~IIaKIEt~~av~nldeI~~~--sDgImIaR 337 (575)
..||...++. |+|+|++|.|++++|++.+.+++... | ...+.++++|||++|+.|+++|++. .|++++|.
T Consensus 97 ~~DL~al~~~~~~g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa~~rv~~L~~G~ 176 (339)
T 3r4i_A 97 RDDVRLILRAAKRAPAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAALPGVEALSFGL 176 (339)
T ss_dssp HHHHHHHHHHCSSCCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHTCTTEEEEEECH
T ss_pred HHHHHHhhhhccCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHcCcCCCEEEECH
Confidence 4566666664 89999999999999999998887532 2 1358899999999999999999954 79999999
Q ss_pred CCCCCCCCCC---------------ChHHHHHHHHHHHHHcCCCEE
Q 008172 338 GDLGVDIPLE---------------QIPTVQEIIIHVCRQLNKPVI 368 (575)
Q Consensus 338 GDLg~e~~~e---------------~v~~~Qk~Ii~~c~~~gKPvi 368 (575)
.||..+++.. .+..+..+++.+|+++|++++
T Consensus 177 ~DL~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~i 222 (339)
T 3r4i_A 177 MDFVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVPS 222 (339)
T ss_dssp HHHHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCCc
Confidence 9999888641 144566789999999999985
No 25
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=98.44 E-value=2.2e-07 Score=99.34 Aligned_cols=131 Identities=8% Similarity=-0.020 Sum_probs=99.4
Q ss_pred CHHHHHHHHH------cCCCEEEecCcCChhhHHHHHHHHhc----cCC--CCceEEeeecCHHH---HhcHHHHHhc--
Q 008172 267 DWDDIEFGIA------EGVDFIAMSFVCDADSVRHLKKYVSG----KSS--RSIKVLAKIENLES---LQKFEEIVEA-- 329 (575)
Q Consensus 267 D~~di~~al~------~gvd~I~~SfV~sa~dv~~ir~~l~~----~~~--~~i~IIaKIEt~~a---v~nldeI~~~-- 329 (575)
-..||...+. .++|+|.+|.|+++++++.+.+.+.. .|. ..+.+++.|||++| +.|+++|+.+
T Consensus 98 ~~~DL~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~eIAaasr 177 (433)
T 3oyz_A 98 GFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDEMGKPT 177 (433)
T ss_dssp HHHHHHHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHHHHHCTT
T ss_pred cHHHHHHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHHHHhhhc
Confidence 3567776666 78999999999999999998887753 221 25899999999999 9999999976
Q ss_pred -----CCEEEEeCCCCCCCCCC-------CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhh-HhhHHHHHH
Q 008172 330 -----SDGIMVARGDLGVDIPL-------EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAE-VADVSEAVR 396 (575)
Q Consensus 330 -----sDgImIaRGDLg~e~~~-------e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAE-v~Dv~nav~ 396 (575)
.+|+++|+.||..+++. +.+..+..+++.+|+++|++.+= + + ....-..+- ..+...+..
T Consensus 178 ~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aID-g-----V-~~di~D~egL~~ea~~ar~ 250 (433)
T 3oyz_A 178 NNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVD-G-----P-YDDIRDVEGYRERMTDNQA 250 (433)
T ss_dssp CCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEE-C-----C-CCCTTCHHHHHHHHHHHHT
T ss_pred cCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCccc-c-----c-ccCCCCHHHHHHHHHHHHh
Confidence 48999999999888875 24667788999999999998752 1 0 111111111 246677889
Q ss_pred cccceEEe
Q 008172 397 QYADALML 404 (575)
Q Consensus 397 ~G~D~vmL 404 (575)
.|+|+-+.
T Consensus 251 lGF~GK~~ 258 (433)
T 3oyz_A 251 KGMLGIWS 258 (433)
T ss_dssp TTCCEEEE
T ss_pred CCCCceEe
Confidence 99998766
No 26
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=98.20 E-value=3.2e-06 Score=98.18 Aligned_cols=118 Identities=17% Similarity=0.124 Sum_probs=95.0
Q ss_pred CCC---EEEecCcCChhhHHHHHHHHhc--------cCC-CCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCC-CCC
Q 008172 278 GVD---FIAMSFVCDADSVRHLKKYVSG--------KSS-RSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLG-VDI 344 (575)
Q Consensus 278 gvd---~I~~SfV~sa~dv~~ir~~l~~--------~~~-~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg-~e~ 344 (575)
|.+ .|++|||++++|++++++.+.. .|. .++.+.++||++.|+.++|+|++.+|++.||..||. ..+
T Consensus 701 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~G~~~~~~vg~MIEtP~a~l~adeIA~~vDf~siGtNDLtQ~~l 780 (876)
T 1vbg_A 701 GVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADEIAEQAEFFSFGTNDLTQMTF 780 (876)
T ss_dssp TCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 765 6999999999999999977642 231 358899999999999999999999999999999988 222
Q ss_pred CC----------------------------CChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHHH
Q 008172 345 PL----------------------------EQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSEA 394 (575)
Q Consensus 345 ~~----------------------------e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~na 394 (575)
+. +.|-...++++++|+++ ||||+++.|+= ..|.-+ .-.
T Consensus 781 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~~------gdP~~~-----~~l 849 (876)
T 1vbg_A 781 GYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGEHG------GEPSSV-----AFF 849 (876)
T ss_dssp TCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESGGG------GSHHHH-----HHH
T ss_pred CCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEcCCcC------CCHHHH-----HHH
Confidence 21 46777888999999998 99999998743 134443 557
Q ss_pred HHcccceEEecc
Q 008172 395 VRQYADALMLSG 406 (575)
Q Consensus 395 v~~G~D~vmLs~ 406 (575)
+..|.|.+-+|.
T Consensus 850 ~~~Gl~~vS~sp 861 (876)
T 1vbg_A 850 AKAGLDYVSCSP 861 (876)
T ss_dssp HHTTCSEEEECG
T ss_pred HHcCCCEEEECc
Confidence 889999998873
No 27
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=98.05 E-value=9.4e-06 Score=94.24 Aligned_cols=117 Identities=16% Similarity=0.169 Sum_probs=94.9
Q ss_pred CCC---EEEecCcCChhhHHHHHHHHhc--------cCC-CCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCC-CCC
Q 008172 278 GVD---FIAMSFVCDADSVRHLKKYVSG--------KSS-RSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLG-VDI 344 (575)
Q Consensus 278 gvd---~I~~SfV~sa~dv~~ir~~l~~--------~~~-~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg-~e~ 344 (575)
|.+ .|++|||++++|++++++.+.. .|. .++.+.++||++.|+.+.++|++.+|++.||-.||. ..+
T Consensus 695 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~ad~iA~~vdf~siGtNDLtQ~~l 774 (873)
T 1kbl_A 695 GIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTF 774 (873)
T ss_dssp CCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 865 7999999999999999987642 231 358899999999999999999999999999999988 222
Q ss_pred CC----------------------------CChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHHH
Q 008172 345 PL----------------------------EQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSEA 394 (575)
Q Consensus 345 ~~----------------------------e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~na 394 (575)
+. +.|-...++++++|+++ |+||+++.|+= ..|.-+ .-.
T Consensus 775 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~~------gdP~~~-----~~l 843 (873)
T 1kbl_A 775 GFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEHG------GDPSSV-----EFC 843 (873)
T ss_dssp TCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECSGGG------GSHHHH-----HHH
T ss_pred CCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECCCCC------CCHHHH-----HHH
Confidence 22 56777888999999997 99999998743 134443 556
Q ss_pred HHcccceEEec
Q 008172 395 VRQYADALMLS 405 (575)
Q Consensus 395 v~~G~D~vmLs 405 (575)
+..|.|.+-+|
T Consensus 844 ~~~Gl~~vS~s 854 (873)
T 1kbl_A 844 HKVGLNYVSCS 854 (873)
T ss_dssp HHTTCSEEEEC
T ss_pred HHcCCCEEEEC
Confidence 88999999877
No 28
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=97.02 E-value=0.0019 Score=75.11 Aligned_cols=136 Identities=16% Similarity=0.129 Sum_probs=103.4
Q ss_pred cCCCCCccCHHHHHHHH----HcCCC---EEEecCcCChhhHHHHHHHHh--------ccCC-CCceEEeeecCHHHHhc
Q 008172 259 GLPTLSKKDWDDIEFGI----AEGVD---FIAMSFVCDADSVRHLKKYVS--------GKSS-RSIKVLAKIENLESLQK 322 (575)
Q Consensus 259 ~lp~lsekD~~di~~al----~~gvd---~I~~SfV~sa~dv~~ir~~l~--------~~~~-~~i~IIaKIEt~~av~n 322 (575)
.-|.+-+-..+.|..|. +.|.+ .|++|||++.++++.+++.+. +.|. .++.+-.+||.+.|.-.
T Consensus 698 ~~peif~~QlrAi~rAa~~~~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el~~e~g~~~~~~vG~MiEvPsaal~ 777 (913)
T 1h6z_A 698 TYPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVT 777 (913)
T ss_dssp HSTTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHHT
T ss_pred CChHHHHHHHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecchHHHHH
Confidence 34555555556666653 23755 899999999999999998763 2231 24789999999999999
Q ss_pred HHHHHhcCCEEEEeCCCCCC-----C-------C------------CC-----CChHHHHHHHHHHHHH--cCCCEEEeh
Q 008172 323 FEEIVEASDGIMVARGDLGV-----D-------I------------PL-----EQIPTVQEIIIHVCRQ--LNKPVIVAS 371 (575)
Q Consensus 323 ldeI~~~sDgImIaRGDLg~-----e-------~------------~~-----e~v~~~Qk~Ii~~c~~--~gKPvivaT 371 (575)
.|+|++.+|++=||--||.. + + |+ +.|-...++.+++|++ .|+||+++.
T Consensus 778 ad~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgICG 857 (913)
T 1h6z_A 778 ADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICG 857 (913)
T ss_dssp HHHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECS
T ss_pred HHHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEEcC
Confidence 99999999999999998642 1 1 11 5677788899999997 699999998
Q ss_pred hhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 372 QLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 372 q~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
|+= ..|.-+ .-.+..|.|.+-+|
T Consensus 858 E~~------gdP~~~-----~~l~~~Gid~vS~s 880 (913)
T 1h6z_A 858 EHG------GDPATI-----GFCHKVGLDYVSCS 880 (913)
T ss_dssp GGG------GCHHHH-----HHHHHHTCSEEEEC
T ss_pred CCC------CCHHHH-----HHHHHcCCCEEEEC
Confidence 864 235444 55778999999988
No 29
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=96.98 E-value=0.00084 Score=73.83 Aligned_cols=132 Identities=16% Similarity=0.141 Sum_probs=90.2
Q ss_pred HHHHHHHHcC-CCEEEecCcCChhhHHHHHHHHhc----cCC--CCceEEeeecCHHHHhcHHHHHhc----CCEEEEeC
Q 008172 269 DDIEFGIAEG-VDFIAMSFVCDADSVRHLKKYVSG----KSS--RSIKVLAKIENLESLQKFEEIVEA----SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~g-vd~I~~SfV~sa~dv~~ir~~l~~----~~~--~~i~IIaKIEt~~av~nldeI~~~----sDgImIaR 337 (575)
.|++..+..| .++|.+|-+++++|++.+.+.+.. .|. ..+++++.|||..|+-|++||+.. +.|+..||
T Consensus 196 ~Dl~~l~~~g~g~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtiki~vlIET~~a~~n~~eIa~al~~rv~gLn~G~ 275 (532)
T 3cuz_A 196 HNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGR 275 (532)
T ss_dssp HHHHHHHHTTCCCEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEECCS
T ss_pred HHHHHHHcCCCCCeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeccHHHHHhHHHHHHhccCCceEEEcCH
Confidence 3444445433 499999999999999998877641 121 258999999999999999999975 56999999
Q ss_pred CCCCCCCCC----------C----------ChHHHHHHHHHHHHHcCCCEEE--ehhhHHhhhcCCCCCh--h----hHh
Q 008172 338 GDLGVDIPL----------E----------QIPTVQEIIIHVCRQLNKPVIV--ASQLLESMVEYPTPTR--A----EVA 389 (575)
Q Consensus 338 GDLg~e~~~----------e----------~v~~~Qk~Ii~~c~~~gKPviv--aTq~LeSM~~~p~Ptr--A----Ev~ 389 (575)
.|+..++-. + -+...++..+.+|+++|++.|- +- ++. -..|.. + =..
T Consensus 276 ~Dy~~s~i~~~~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~a~G~~aIdGm~a-~~p----~kD~e~~~~~~~~l~~ 350 (532)
T 3cuz_A 276 WDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAA-FIP----SKDEEHNNQVLNKVKA 350 (532)
T ss_dssp HHHHHHHHHHTTTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEC-BCC----CSSGGGCHHHHHHHHH
T ss_pred HHHHHHHHhhcccCCCccCccccccccchHHHHHHHHHHHHHHHHcCCCCccCccc-cCC----CCChhHHHHHHHHHHH
Confidence 998765510 1 1334444555999999998764 21 110 001111 1 124
Q ss_pred hHHHHHHcccceEEec
Q 008172 390 DVSEAVRQYADALMLS 405 (575)
Q Consensus 390 Dv~nav~~G~D~vmLs 405 (575)
|...+..+|+||-+.-
T Consensus 351 dk~~~~~~GfdGkwvi 366 (532)
T 3cuz_A 351 DKSLEANNGHDGTWIA 366 (532)
T ss_dssp HHHHHHHHTCSEEEES
T ss_pred HHHHHHHCCCCccccC
Confidence 5666888999998874
No 30
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=96.76 E-value=0.0066 Score=66.72 Aligned_cols=122 Identities=16% Similarity=0.176 Sum_probs=88.0
Q ss_pred HcCCCEEEecCcCChhhHHHHHHHHhc----cCC--CCceEEeeecCHHHHhcHHHHHhc----CCEEEEeCCCCCCCCC
Q 008172 276 AEGVDFIAMSFVCDADSVRHLKKYVSG----KSS--RSIKVLAKIENLESLQKFEEIVEA----SDGIMVARGDLGVDIP 345 (575)
Q Consensus 276 ~~gvd~I~~SfV~sa~dv~~ir~~l~~----~~~--~~i~IIaKIEt~~av~nldeI~~~----sDgImIaRGDLg~e~~ 345 (575)
..|+ +|.+|-+++++|++.+-+.+.. .|. ..+++.+.|||..|+-|++||+.. +.|+..||.|+..++.
T Consensus 202 ~~gp-yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~~Dy~~s~i 280 (528)
T 3cux_A 202 GSGP-YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFL 280 (528)
T ss_dssp TCCC-EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHH
T ss_pred CCCC-EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCHHHHHHHhh
Confidence 3576 9999999999999998877642 121 269999999999999999999965 5699999999866542
Q ss_pred C--------------------CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCCh-----------hhHhhHHHH
Q 008172 346 L--------------------EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTR-----------AEVADVSEA 394 (575)
Q Consensus 346 ~--------------------e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~Ptr-----------AEv~Dv~na 394 (575)
. +-+..+++.++.+|+++|++.|-. |- .+ .|.+ .=..|-...
T Consensus 281 ~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~a~G~~aIgG--m~-a~----ip~~~D~~~n~~~~~~~~~dk~~~ 353 (528)
T 3cux_A 281 KAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHRRNAPAIGG--MA-AQ----IPIKNNPEANEAAFEKVRADKERE 353 (528)
T ss_dssp HHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCCEEC--------------------------CHHHHHHHHH
T ss_pred hhccCCccccchhhhhcccccHHHHHHHHHHHHHHHHcCCCCccc--cc-cc----CcCcCChHHHHHHHHHHHHHHHHH
Confidence 0 124556677889999999987741 11 12 2322 113555678
Q ss_pred HHcccceEEec
Q 008172 395 VRQYADALMLS 405 (575)
Q Consensus 395 v~~G~D~vmLs 405 (575)
..+|+||-+.-
T Consensus 354 ~~~GfdGkwvi 364 (528)
T 3cux_A 354 ALDGHDGTWVA 364 (528)
T ss_dssp HHHTCSBEEES
T ss_pred HhCCCCccccc
Confidence 89999998885
No 31
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=96.68 E-value=0.0013 Score=73.89 Aligned_cols=130 Identities=14% Similarity=0.074 Sum_probs=91.6
Q ss_pred HHHHHHHH--cCCCEEEecCcCChhhHHHHHHHHhc----cCC--CCceEEeeecCHHHHhcHHHHHhc----CCEEEEe
Q 008172 269 DDIEFGIA--EGVDFIAMSFVCDADSVRHLKKYVSG----KSS--RSIKVLAKIENLESLQKFEEIVEA----SDGIMVA 336 (575)
Q Consensus 269 ~di~~al~--~gvd~I~~SfV~sa~dv~~ir~~l~~----~~~--~~i~IIaKIEt~~av~nldeI~~~----sDgImIa 336 (575)
.|++..+. .|.++|.+|-+++++|++.+.+.+.. .|. ..+++.+.|||+.|+-|++||+.. +.|+..|
T Consensus 373 hDl~al~~sg~G~~yIvLPKmespeEV~~~~~lf~~~E~~lGlp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gLn~G 452 (731)
T 1p7t_A 373 YDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFINTG 452 (731)
T ss_dssp HHHHHCSSCSSSCEEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEEEEC
T ss_pred hhHHHHhhCCCCCcEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCCCceEEEEEECCHHHHHhHHHHHHhhccceEEEEcC
Confidence 44444343 35799999999999999998887642 221 258999999999999999999753 5799999
Q ss_pred CCCCCCCC-CC----------------CChHHHHHHHHH---HHHHcCCCEEEehhhHHhhhcCCCCChhh--HhhHHHH
Q 008172 337 RGDLGVDI-PL----------------EQIPTVQEIIIH---VCRQLNKPVIVASQLLESMVEYPTPTRAE--VADVSEA 394 (575)
Q Consensus 337 RGDLg~e~-~~----------------e~v~~~Qk~Ii~---~c~~~gKPvivaTq~LeSM~~~p~PtrAE--v~Dv~na 394 (575)
+.|+..++ .. +-+...++..+. +|+++|++.|-- .|-.. |..-| ..|-...
T Consensus 453 ~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcraaG~~aIgk-----Gm~a~--p~dmeg~~~dk~~~ 525 (731)
T 1p7t_A 453 FLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGK-----GMWAM--PDLMADMYSQKGDQ 525 (731)
T ss_dssp HHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTTCTTTSEEEE-----CCCCC--TTCHHHHHHHTHHH
T ss_pred HHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHHHcCCCCccc-----ccccC--hhhHHHHHHHHHHH
Confidence 99987764 21 113334566665 899999997740 12222 33222 3556667
Q ss_pred HHcccceEEec
Q 008172 395 VRQYADALMLS 405 (575)
Q Consensus 395 v~~G~D~vmLs 405 (575)
..+|+||-++-
T Consensus 526 ~~~GfdGkwVi 536 (731)
T 1p7t_A 526 LRAGANTAWVP 536 (731)
T ss_dssp HHTTCSEEEES
T ss_pred HhCCCCCcccC
Confidence 89999998885
No 32
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=96.07 E-value=0.14 Score=49.12 Aligned_cols=103 Identities=17% Similarity=0.154 Sum_probs=76.9
Q ss_pred hhhHHHHHHHHHHHhcCCcEEEEEcCChhHHHHHhccCCCCcEEEEc-------C-----cHHHHHHhcccCCcEEEEec
Q 008172 455 IAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFT-------N-----DDSTRMALNLQWGVIPVLVN 522 (575)
Q Consensus 455 ~~~~ia~~av~~a~~~~AkaIVVfT~SG~TAr~VSr~RP~~PIiAvT-------~-----~~~~aR~L~L~~GV~Pvl~~ 522 (575)
-++.....|++.|.+++.+-|||.|.||.||+.+...-....+++|| | ++.+.+.| -..|+.-+--.
T Consensus 27 NT~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L-~~~G~~V~t~t 105 (201)
T 1vp8_A 27 NTEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEEL-RKRGAKIVRQS 105 (201)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHH-HHTTCEEEECC
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHH-HhCCCEEEEEe
Confidence 46778888899999999999999999999999999877778999999 4 55666666 55666655432
Q ss_pred C------------C--CCHHHHHHHHHH---------------HHHHcCCCCCCCEEEEEecCCCC
Q 008172 523 L------------S--DDMETNIAKTID---------------LIKMKGMVKYGDAVLVVLDLTPA 559 (575)
Q Consensus 523 ~------------~--~d~d~~i~~al~---------------~~~~~g~~k~GD~VVvv~G~~~~ 559 (575)
- + -..-+.+..++. .+.+.|++.. +.||.++|.-.|
T Consensus 106 H~lsgveR~is~kfGG~~p~eiiA~tLR~~fgqG~KV~vEi~lMAaDAGlIp~-eeVIAiGGT~~G 170 (201)
T 1vp8_A 106 HILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLKVCVEITIMAADSGAIPI-EEVVAVGGRSRG 170 (201)
T ss_dssp CTTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSCS-SCEEEEECSSSS
T ss_pred ccccchhHHHHHhcCCCCHHHHHHHHHHHHhcCCceEEEEEeeeecccCCCCc-ceEEEEccccCC
Confidence 1 1 123344444444 4568999999 999999887664
No 33
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=95.58 E-value=0.21 Score=48.09 Aligned_cols=103 Identities=20% Similarity=0.218 Sum_probs=73.4
Q ss_pred hhhHHHHHHHHHHHhcCCcEEEEEcCChhHHHHHhccCCCCcEEEEc-------C-----cHHHHHHhcccCCcEEEEec
Q 008172 455 IAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFT-------N-----DDSTRMALNLQWGVIPVLVN 522 (575)
Q Consensus 455 ~~~~ia~~av~~a~~~~AkaIVVfT~SG~TAr~VSr~RP~~PIiAvT-------~-----~~~~aR~L~L~~GV~Pvl~~ 522 (575)
-++.....|++.|.+++.+-|||.|.+|.||+.+...-.. .+++|| | ++++.+.| ...|+.-+--.
T Consensus 35 NT~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L-~~~G~~V~t~t 112 (206)
T 1t57_A 35 NTERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEG-NIVSVTHHAGFREKGQLELEDEARDAL-LERGVNVYAGS 112 (206)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCS-EEEEECCCTTSSSTTCCSSCHHHHHHH-HHHTCEEECCS
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccC-CEEEEeCcCCCCCCCCCcCCHHHHHHH-HhCCCEEEEee
Confidence 4577888889999999999999999999999999987655 999999 4 45666666 44555443321
Q ss_pred CC-C-------------CHHHHHHH-----------HH---HHHHHcCCCCCCCEEEEEecCCCC
Q 008172 523 LS-D-------------DMETNIAK-----------TI---DLIKMKGMVKYGDAVLVVLDLTPA 559 (575)
Q Consensus 523 ~~-~-------------d~d~~i~~-----------al---~~~~~~g~~k~GD~VVvv~G~~~~ 559 (575)
-. . ..-+.+.. |+ -.+.+.|++..|+.||.++|.-.|
T Consensus 113 H~lsG~eR~is~kfGG~~p~eiiA~tLR~fgqG~KV~vEi~lMAaDAGlIp~geeVIAiGGT~~G 177 (206)
T 1t57_A 113 HALSGVGRGISNRFGGVTPVEIMAETLRMVSQGFKVCVEIAIMAADAGLIPVDEEVIAIGGTAWG 177 (206)
T ss_dssp CTTTTHHHHHHHHHCSCCHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTSSCSSSCEEEEECSSSS
T ss_pred ccccchhHHHHHhcCCCCHHHHHHHHHHHhCCCceEEEEEeeeeecCCCCCCCCeEEEEccccCC
Confidence 10 1 12222222 22 345689999999999999987664
No 34
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=95.33 E-value=0.061 Score=63.00 Aligned_cols=114 Identities=16% Similarity=0.115 Sum_probs=85.3
Q ss_pred EEEecCcCChhhHHHHHHHHh--------ccCC-CCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCC-----CC--
Q 008172 281 FIAMSFVCDADSVRHLKKYVS--------GKSS-RSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGV-----DI-- 344 (575)
Q Consensus 281 ~I~~SfV~sa~dv~~ir~~l~--------~~~~-~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~-----e~-- 344 (575)
.|++|||++.++++.+++.+. +.+. .+..|-.+||.|.++-..|+|++.+|++=||--||.. +=
T Consensus 727 ~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~g~~~~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLTQ~tlg~DRd~ 806 (913)
T 2x0s_A 727 EIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDD 806 (913)
T ss_dssp EEEETTCCSHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHHHHHHTCCGGG
T ss_pred EEEeeecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHHHHHHHHhcCC
Confidence 599999999999998887653 2231 2478999999999999999999999999999888732 11
Q ss_pred -----------------C-----CCChHHHHHHHHHHHHHcC--CCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccc
Q 008172 345 -----------------P-----LEQIPTVQEIIIHVCRQLN--KPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYAD 400 (575)
Q Consensus 345 -----------------~-----~e~v~~~Qk~Ii~~c~~~g--KPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D 400 (575)
| .+-|-.+.+..+++|++.+ .||.++.|+= ..|.-+ .-.+..|.|
T Consensus 807 ~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgICGE~~------gdP~~~-----~~L~~~Gid 875 (913)
T 2x0s_A 807 AGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEHG------GDPATI-----GFCHKVGLD 875 (913)
T ss_dssp CHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSGGG------GCHHHH-----HHHHHHTCS
T ss_pred chhhhhhhhhccccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEEeCCcc------cCHHHH-----HHHHHcCCC
Confidence 1 1245555566666676655 5899999863 234444 567889999
Q ss_pred eEEec
Q 008172 401 ALMLS 405 (575)
Q Consensus 401 ~vmLs 405 (575)
.+-+|
T Consensus 876 ~~S~s 880 (913)
T 2x0s_A 876 YVSCS 880 (913)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99998
No 35
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=94.35 E-value=0.32 Score=46.13 Aligned_cols=134 Identities=11% Similarity=0.109 Sum_probs=85.9
Q ss_pred HHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEee---ecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCCC
Q 008172 270 DIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAK---IENLESLQKFEEIVEA-SDGIMVARGDLGVDIP 345 (575)
Q Consensus 270 di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaK---IEt~~av~nldeI~~~-sDgImIaRGDLg~e~~ 345 (575)
.++.+.+.|+|+|.++.....+++.++.+.+++.| ..++.- .++ ..+.+..+.+. +|.|.+.+|-=|...+
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g---~~~~v~~~~~~t--~~~~~~~~~~~g~d~i~v~~g~~g~~~~ 143 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAG---KQVVVDMICVDD--LPARVRLLEEAGADMLAVHTGTDQQAAG 143 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT---CEEEEECTTCSS--HHHHHHHHHHHTCCEEEEECCHHHHHTT
T ss_pred HHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcC---CeEEEEecCCCC--HHHHHHHHHHcCCCEEEEcCCCcccccC
Confidence 37889999999999987665577888888887775 334432 233 34557777777 8999887663222233
Q ss_pred CCChHHHHHHHHHHHHHc-CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHH
Q 008172 346 LEQIPTVQEIIIHVCRQL-NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMA 424 (575)
Q Consensus 346 ~e~v~~~Qk~Ii~~c~~~-gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I 424 (575)
...+ ..-+++ .... +.|+++..-+ + ..++..+...|+|++....--..+..|.++++.+.+.
T Consensus 144 ~~~~-~~i~~l---~~~~~~~~i~~~gGI----------~---~~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~ 206 (211)
T 3f4w_A 144 RKPI-DDLITM---LKVRRKARIAVAGGI----------S---SQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQV 206 (211)
T ss_dssp CCSH-HHHHHH---HHHCSSCEEEEESSC----------C---TTTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHH
T ss_pred CCCH-HHHHHH---HHHcCCCcEEEECCC----------C---HHHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHH
Confidence 2222 112222 2222 6787764321 1 1366777888999999975555567898888877655
Q ss_pred H
Q 008172 425 S 425 (575)
Q Consensus 425 ~ 425 (575)
.
T Consensus 207 ~ 207 (211)
T 3f4w_A 207 L 207 (211)
T ss_dssp H
T ss_pred H
Confidence 4
No 36
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.12 E-value=0.5 Score=51.99 Aligned_cols=125 Identities=16% Similarity=0.228 Sum_probs=83.0
Q ss_pred CccCHHHHHHHHHcCCCEEEe--cCcCChhhHHHHHHHHhccCCCCceEEe-eecCHHHHhcHHHHHhcCCEEEEeCCCC
Q 008172 264 SKKDWDDIEFGIAEGVDFIAM--SFVCDADSVRHLKKYVSGKSSRSIKVLA-KIENLESLQKFEEIVEASDGIMVARGDL 340 (575)
Q Consensus 264 sekD~~di~~al~~gvd~I~~--SfV~sa~dv~~ir~~l~~~~~~~i~IIa-KIEt~~av~nldeI~~~sDgImIaRGDL 340 (575)
++.+.+.+...++.|+|+|++ ++-.+ +.+.+..+.+++.. .++.||+ -+-|.++..+|-+ +-+|++-||-|-=
T Consensus 279 ~~d~~eR~~aLv~AGvD~iviD~ahGhs-~~v~~~i~~ik~~~-p~~~viaGNVaT~e~a~~Li~--aGAD~vkVGiGpG 354 (556)
T 4af0_A 279 RPGDKDRLKLLAEAGLDVVVLDSSQGNS-VYQIEFIKWIKQTY-PKIDVIAGNVVTREQAAQLIA--AGADGLRIGMGSG 354 (556)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECCSCCCS-HHHHHHHHHHHHHC-TTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCS
T ss_pred CccHHHHHHHHHhcCCcEEEEecccccc-HHHHHHHHHHHhhC-CcceEEeccccCHHHHHHHHH--cCCCEEeecCCCC
Confidence 445677777788999999876 33333 33444445565554 4555555 8999999877643 4499999987752
Q ss_pred CC-------CCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 341 GV-------DIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 341 g~-------e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
++ -++.+.+- +-....+.|+++|+|||--.-+= --.|++.|+..|||+|||.
T Consensus 355 SiCtTr~v~GvG~PQ~t-Ai~~~a~~a~~~~vpvIADGGI~------------~sGDi~KAlaaGAd~VMlG 413 (556)
T 4af0_A 355 SICITQEVMAVGRPQGT-AVYAVAEFASRFGIPCIADGGIG------------NIGHIAKALALGASAVMMG 413 (556)
T ss_dssp TTBCCTTTCCSCCCHHH-HHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred cccccccccCCCCcHHH-HHHHHHHHHHHcCCCEEecCCcC------------cchHHHHHhhcCCCEEEEc
Confidence 21 11223222 23356677888999999643221 3579999999999999995
No 37
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.98 E-value=1 Score=47.29 Aligned_cols=123 Identities=17% Similarity=0.252 Sum_probs=77.2
Q ss_pred ccCHHHHHHHHHcCCCEEEe--cCcCChhhHHHHHHHHhccCCCCceEEe-eecCHHHHhcHHHHHhcCCEEEEeCCCCC
Q 008172 265 KKDWDDIEFGIAEGVDFIAM--SFVCDADSVRHLKKYVSGKSSRSIKVLA-KIENLESLQKFEEIVEASDGIMVARGDLG 341 (575)
Q Consensus 265 ekD~~di~~al~~gvd~I~~--SfV~sa~dv~~ir~~l~~~~~~~i~IIa-KIEt~~av~nldeI~~~sDgImIaRGDLg 341 (575)
+.+.+.++.+++.|+|+|.+ ++-.+...+..++.+- +.. .++.+++ .+-|.+....+.+ .=+|+|.++-|. |
T Consensus 107 ~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik-~~~-p~v~Vi~G~v~t~e~A~~a~~--aGAD~I~vG~gp-G 181 (366)
T 4fo4_A 107 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETR-AAY-PHLEIIGGNVATAEGARALIE--AGVSAVKVGIGP-G 181 (366)
T ss_dssp TTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHH-HHC-TTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSC-S
T ss_pred hhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHH-Hhc-CCCceEeeeeCCHHHHHHHHH--cCCCEEEEecCC-C
Confidence 35678888999999999987 5555554444444433 332 2466665 5777776554432 239999995221 1
Q ss_pred CC--------CCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 342 VD--------IPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 342 ~e--------~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
.. .+.+.+ ..-..+.+.|+..+.|||.+--+- .-.|++.++..|+|+||+.
T Consensus 182 s~~~tr~~~g~g~p~~-~~l~~v~~~~~~~~iPVIA~GGI~------------~~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 182 SICTTRIVTGVGVPQI-TAIADAAGVANEYGIPVIADGGIR------------FSGDISKAIAAGASCVMVG 240 (366)
T ss_dssp TTBCHHHHHCCCCCHH-HHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred CCCCcccccCcccchH-HHHHHHHHHHhhcCCeEEEeCCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 11 122222 223445666677899999765432 2357899999999999996
No 38
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=93.64 E-value=0.58 Score=49.76 Aligned_cols=119 Identities=24% Similarity=0.376 Sum_probs=73.1
Q ss_pred HHHHHHHHHcCCCEEEe--cCcCChhhHHHHHHHHhccCCCCceEEe-eecCHHHHhcHHHHHhc-CCEEEEeCC--CCC
Q 008172 268 WDDIEFGIAEGVDFIAM--SFVCDADSVRHLKKYVSGKSSRSIKVLA-KIENLESLQKFEEIVEA-SDGIMVARG--DLG 341 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~--SfV~sa~dv~~ir~~l~~~~~~~i~IIa-KIEt~~av~nldeI~~~-sDgImIaRG--DLg 341 (575)
.+.++.+++.|+|+|.+ +|-.+....+.++. +.+.- .+.|++ .+-+.+... .+.+. +|+|.++-| ..+
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~-ik~~~--~i~Vi~g~V~t~e~A~---~a~~aGAD~I~vG~g~Gs~~ 219 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKE-IKSKM--NIDVIVGNVVTEEATK---ELIENGADGIKVGIGPGSIC 219 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHH-HHTTC--CCEEEEEEECSHHHHH---HHHHTTCSEEEECC------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHH-HHhcC--CCeEEEeecCCHHHHH---HHHHcCCCEEEEeCCCCcCc
Confidence 67788899999999987 66554333333333 33321 367775 566655543 33444 899999532 111
Q ss_pred CC-----CCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 342 VD-----IPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 342 ~e-----~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
.. .+.+. ..+-.++.+.+++.+.|||.+.-+- ...|++.++..|+|+||+.
T Consensus 220 ~tr~~~g~g~p~-~~al~~v~~~~~~~~IPVIA~GGI~------------~~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 220 TTRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADGGIR------------YSGDIGKALAVGASSVMIG 275 (400)
T ss_dssp ---CCSCBCCCH-HHHHHHHHHHHTTTTCCEEEESCCC------------SHHHHHHHHTTTCSEEEEC
T ss_pred ccccccccchhH-HHHHHHHHHHHHhcCCCEEecCCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 00 11121 2333556666666799999865443 3468899999999999984
No 39
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=93.60 E-value=0.55 Score=45.48 Aligned_cols=139 Identities=14% Similarity=0.127 Sum_probs=83.4
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHh---cCCEEEEeCCCC---C
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVE---ASDGIMVARGDL---G 341 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~---~sDgImIaRGDL---g 341 (575)
.+.++.+.+.|+|+|.+..-.+.+.+.+..+.+.+.| ..++.-+....-++.+.+++. .+|.+.+..-.- |
T Consensus 77 ~~~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g---~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g 153 (228)
T 1h1y_A 77 SDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKG---MRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGG 153 (228)
T ss_dssp GGGHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTT---CEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSS
T ss_pred HHHHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcC---CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCc
Confidence 4457888899999999988777665233334444444 445555533334567888888 799999954322 2
Q ss_pred CCCCCCChHHHHHHHHHHHHHc-CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHH
Q 008172 342 VDIPLEQIPTVQEIIIHVCRQL-NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSV 420 (575)
Q Consensus 342 ~e~~~e~v~~~Qk~Ii~~c~~~-gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~ 420 (575)
..++... -+++-+..+.. +.|+.++.-+ .|. .+..++..|+|++....---..+.|.++++.
T Consensus 154 ~~~~~~~----l~~i~~~~~~~~~~pi~v~GGI--------~~~-----ni~~~~~aGaD~vvvGsai~~~~d~~~~~~~ 216 (228)
T 1h1y_A 154 QKFMPEM----MEKVRALRKKYPSLDIEVDGGL--------GPS-----TIDVAASAGANCIVAGSSIFGAAEPGEVISA 216 (228)
T ss_dssp CCCCGGG----HHHHHHHHHHCTTSEEEEESSC--------STT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHH
T ss_pred ccCCHHH----HHHHHHHHHhcCCCCEEEECCc--------CHH-----HHHHHHHcCCCEEEECHHHHCCCCHHHHHHH
Confidence 2222222 22222222333 7888876432 222 3344555699999986443334568899988
Q ss_pred HHHHHH
Q 008172 421 LQMASS 426 (575)
Q Consensus 421 m~~I~~ 426 (575)
|++..+
T Consensus 217 l~~~~~ 222 (228)
T 1h1y_A 217 LRKSVE 222 (228)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876543
No 40
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=92.91 E-value=0.64 Score=45.47 Aligned_cols=141 Identities=11% Similarity=0.089 Sum_probs=83.3
Q ss_pred HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCCCCCCC
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQ 348 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e~~~e~ 348 (575)
..++.+.+.|+|+|.+.. ...+++.+..+.+++.| ..+.+. +-....++.+++++...|.|++-.-+-|.. |..-
T Consensus 78 ~~i~~~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G-~k~gva--l~p~t~~e~l~~~l~~~D~Vl~msv~pGf~-Gq~f 152 (228)
T 3ovp_A 78 QWVKPMAVAGANQYTFHL-EATENPGALIKDIRENG-MKVGLA--IKPGTSVEYLAPWANQIDMALVMTVEPGFG-GQKF 152 (228)
T ss_dssp GGHHHHHHHTCSEEEEEG-GGCSCHHHHHHHHHHTT-CEEEEE--ECTTSCGGGTGGGGGGCSEEEEESSCTTTC-SCCC
T ss_pred HHHHHHHHcCCCEEEEcc-CCchhHHHHHHHHHHcC-CCEEEE--EcCCCCHHHHHHHhccCCeEEEeeecCCCC-Cccc
Confidence 456778899999999965 44456777777777666 334444 433334688889999999998732221110 1111
Q ss_pred hHHHHHHHHHHHHHc-CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHH
Q 008172 349 IPTVQEIIIHVCRQL-NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSR 427 (575)
Q Consensus 349 v~~~Qk~Ii~~c~~~-gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 427 (575)
.+..-++|-+..... +.|+.+..-+ .| ..+..++..|+|.+....--.....|.++++.+++.+.+
T Consensus 153 ~~~~l~ki~~lr~~~~~~~I~VdGGI--------~~-----~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~~~ 219 (228)
T 3ovp_A 153 MEDMMPKVHWLRTQFPSLDIEVDGGV--------GP-----DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSE 219 (228)
T ss_dssp CGGGHHHHHHHHHHCTTCEEEEESSC--------ST-----TTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCEEEeCCc--------CH-----HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHH
Confidence 222222322222222 3455554321 23 334677889999999874333346799998888765543
No 41
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=92.80 E-value=1.4 Score=47.91 Aligned_cols=124 Identities=15% Similarity=0.232 Sum_probs=77.5
Q ss_pred CccCHHHHHHHHHcCCCEEEecCcC--ChhhHHHHHHHHhccCCCCceEEe-eecCHHHHhcHHHHHhc-CCEEEEeCCC
Q 008172 264 SKKDWDDIEFGIAEGVDFIAMSFVC--DADSVRHLKKYVSGKSSRSIKVLA-KIENLESLQKFEEIVEA-SDGIMVARGD 339 (575)
Q Consensus 264 sekD~~di~~al~~gvd~I~~SfV~--sa~dv~~ir~~l~~~~~~~i~IIa-KIEt~~av~nldeI~~~-sDgImIaRGD 339 (575)
.+.+.+.++..++.|+|+|.+-.-. +..-+..++. +.+.. .++.|++ .+-+.+....+ .+. +|+|.++=|.
T Consensus 229 ~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~-ir~~~-p~~~Vi~g~v~t~e~a~~l---~~aGaD~I~Vg~g~ 303 (496)
T 4fxs_A 229 APGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRE-TRAAY-PHLEIIGGNVATAEGARAL---IEAGVSAVKVGIGP 303 (496)
T ss_dssp SSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHH-HHHHC-TTCCEEEEEECSHHHHHHH---HHHTCSEEEECSSC
T ss_pred ccchHHHHHHHHhccCceEEeccccccchHHHHHHHH-HHHHC-CCceEEEcccCcHHHHHHH---HHhCCCEEEECCCC
Confidence 3567888889999999999885432 2222222222 32222 2455655 47777665443 344 9999996443
Q ss_pred CCCC-------CCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 340 LGVD-------IPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 340 Lg~e-------~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
=+.. .+.+ -..+-.++.+.|++.+.|+|.+.-+- -..|++.|+..|||++|+.
T Consensus 304 Gs~~~tr~~~g~g~p-~~~~i~~v~~~~~~~~iPVIa~GGI~------------~~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 304 GSICTTRIVTGVGVP-QITAIADAAGVANEYGIPVIADGGIR------------FSGDISKAIAAGASCVMVG 363 (496)
T ss_dssp CTTBCHHHHHCCCCC-HHHHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred CcCcccccccCCCcc-HHHHHHHHHHHhccCCCeEEEeCCCC------------CHHHHHHHHHcCCCeEEec
Confidence 2211 1122 22333567777888899999865433 3468899999999999995
No 42
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=92.58 E-value=1.1 Score=48.87 Aligned_cols=125 Identities=20% Similarity=0.223 Sum_probs=77.3
Q ss_pred ccCHHHHHHHHHcCCCEEEecCcC-ChhhHHHHHHHHhccCCCCceEEe-eecCHHHHhcHHHHHhcCCEEEEeCCCCCC
Q 008172 265 KKDWDDIEFGIAEGVDFIAMSFVC-DADSVRHLKKYVSGKSSRSIKVLA-KIENLESLQKFEEIVEASDGIMVARGDLGV 342 (575)
Q Consensus 265 ekD~~di~~al~~gvd~I~~SfV~-sa~dv~~ir~~l~~~~~~~i~IIa-KIEt~~av~nldeI~~~sDgImIaRGDLg~ 342 (575)
+.+.+.+...++.|+|.|.+.... ..+.+.++.+.+.+.. .++.+++ -+-+.+....+.+ .-+|+|.++-|-=+.
T Consensus 255 ~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~-~~~~vi~g~v~t~e~a~~~~~--aGad~i~vg~g~gsi 331 (511)
T 3usb_A 255 ADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKY-PSLNIIAGNVATAEATKALIE--AGANVVKVGIGPGSI 331 (511)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHC-TTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTT
T ss_pred cchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhC-CCceEEeeeeccHHHHHHHHH--hCCCEEEECCCCccc
Confidence 344777888899999999985433 2233333333333332 3455555 6777665443322 238999996443111
Q ss_pred -------CCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 343 -------DIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 343 -------e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
..+.+.+ .+-..+.+.|++.+.|||.+.-+- -..|++.|+..|||++|+.
T Consensus 332 ~~~~~~~g~g~p~~-~~l~~v~~~~~~~~iPVIa~GGI~------------~~~di~kala~GA~~V~vG 388 (511)
T 3usb_A 332 CTTRVVAGVGVPQL-TAVYDCATEARKHGIPVIADGGIK------------YSGDMVKALAAGAHVVMLG 388 (511)
T ss_dssp CCHHHHHCCCCCHH-HHHHHHHHHHHTTTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred cccccccCCCCCcH-HHHHHHHHHHHhCCCcEEEeCCCC------------CHHHHHHHHHhCchhheec
Confidence 1122222 333466777888899999865433 3578899999999999995
No 43
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=92.54 E-value=0.81 Score=45.46 Aligned_cols=140 Identities=7% Similarity=0.029 Sum_probs=85.8
Q ss_pred HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCC--CCCCCCC
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGD--LGVDIPL 346 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGD--Lg~e~~~ 346 (575)
..++.+.+.|+|+|.+..-- .+++.+..+.+++.| ..+.+. |-....++.+++++...|.|++-.-+ +|.+-=.
T Consensus 100 ~~i~~~~~aGAd~itvH~Ea-~~~~~~~i~~ir~~G-~k~Gva--lnp~Tp~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi 175 (246)
T 3inp_A 100 ALIESFAKAGATSIVFHPEA-SEHIDRSLQLIKSFG-IQAGLA--LNPATGIDCLKYVESNIDRVLIMSVNPGFGGQKFI 175 (246)
T ss_dssp HHHHHHHHHTCSEEEECGGG-CSCHHHHHHHHHTTT-SEEEEE--ECTTCCSGGGTTTGGGCSEEEEECSCTTC--CCCC
T ss_pred HHHHHHHHcCCCEEEEcccc-chhHHHHHHHHHHcC-CeEEEE--ecCCCCHHHHHHHHhcCCEEEEeeecCCCCCcccc
Confidence 46778889999999987543 357777777777776 334444 43333567888999999999874222 2222112
Q ss_pred CChHHHHHHHHHHHHHcC--CCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHH
Q 008172 347 EQIPTVQEIIIHVCRQLN--KPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMA 424 (575)
Q Consensus 347 e~v~~~Qk~Ii~~c~~~g--KPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I 424 (575)
+....--+++-+.+.+.| .++-+..- -.|.. +..++..|+|.+....---....|.++++.+++.
T Consensus 176 ~~~l~KI~~lr~~~~~~~~~~~I~VDGG--------I~~~t-----i~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~ 242 (246)
T 3inp_A 176 PAMLDKAKEISKWISSTDRDILLEIDGG--------VNPYN-----IAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDE 242 (246)
T ss_dssp TTHHHHHHHHHHHHHHHTSCCEEEEESS--------CCTTT-----HHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCCeeEEEECC--------cCHHH-----HHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHHH
Confidence 333333344444555555 44444321 12333 4677889999999864322346788888887765
Q ss_pred H
Q 008172 425 S 425 (575)
Q Consensus 425 ~ 425 (575)
.
T Consensus 243 i 243 (246)
T 3inp_A 243 L 243 (246)
T ss_dssp H
T ss_pred H
Confidence 3
No 44
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=92.39 E-value=1.7 Score=45.44 Aligned_cols=119 Identities=23% Similarity=0.374 Sum_probs=71.8
Q ss_pred HHHHHHHHHcCCCEEEe--cCcCChhhHHHHHHHHhccCCCCceEEe-eecCHHHHhcHHHHHhc-CCEEEEe--CCCCC
Q 008172 268 WDDIEFGIAEGVDFIAM--SFVCDADSVRHLKKYVSGKSSRSIKVLA-KIENLESLQKFEEIVEA-SDGIMVA--RGDLG 341 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~--SfV~sa~dv~~ir~~l~~~~~~~i~IIa-KIEt~~av~nldeI~~~-sDgImIa--RGDLg 341 (575)
.+.++.+++.|+|+|.+ ++-.+...+..++. +.+.. .+.+++ .+-+.+.... ..+. +|+|.++ +|...
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~-i~~~~--~~~Vivg~v~t~e~A~~---l~~aGaD~I~VG~~~Gs~~ 180 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKE-IKSKM--NIDVIVGNVVTEEATKE---LIENGADGIKVGIGPGSIC 180 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHH-HHHHC--CCEEEEEEECSHHHHHH---HHHTTCSEEEECSSCCTTC
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHH-HHHhc--CCcEEEccCCCHHHHHH---HHHcCcCEEEEecCCCcCC
Confidence 67778889999999987 44333222233333 22221 356665 7777765543 3444 8999995 33210
Q ss_pred C-----CCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 342 V-----DIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 342 ~-----e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
. ..+.+. ...-.++.+.+++.+.|||.+.-+- ...|++.++..|+|++|+.
T Consensus 181 ~tr~~~g~g~p~-~~~i~~v~~~~~~~~iPVIA~GGI~------------~~~di~kala~GAd~V~vG 236 (361)
T 3khj_A 181 TTRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADGGIR------------YSGDIGKALAVGASSVMIG 236 (361)
T ss_dssp CHHHHTCBCCCH-HHHHHHHHHHHHHHTCCEEEESCCC------------SHHHHHHHHHHTCSEEEES
T ss_pred CcccccCCCCCc-HHHHHHHHHHHhhcCCeEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 0 011222 2233455566677799999764332 2357889999999999985
No 45
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=92.36 E-value=1.2 Score=45.63 Aligned_cols=111 Identities=15% Similarity=0.223 Sum_probs=69.6
Q ss_pred HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEE-eCCCCCCCCCC
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMV-ARGDLGVDIPL 346 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImI-aRGDLg~e~~~ 346 (575)
+.++.+.+.|+|+|.+++=...+.++.+++ . .+.++.++.+.+-.. .+.+. +|+|.+ ++ +-|-..+.
T Consensus 79 ~~~~~a~~~g~d~V~~~~g~p~~~i~~l~~----~---g~~v~~~v~~~~~a~---~~~~~GaD~i~v~g~-~~GG~~g~ 147 (332)
T 2z6i_A 79 DIVDLVIEEGVKVVTTGAGNPSKYMERFHE----A---GIIVIPVVPSVALAK---RMEKIGADAVIAEGM-EAGGHIGK 147 (332)
T ss_dssp HHHHHHHHTTCSEEEECSSCGGGTHHHHHH----T---TCEEEEEESSHHHHH---HHHHTTCSCEEEECT-TSSEECCS
T ss_pred HHHHHHHHCCCCEEEECCCChHHHHHHHHH----c---CCeEEEEeCCHHHHH---HHHHcCCCEEEEECC-CCCCCCCC
Confidence 456788999999999988554555555553 2 378999998876543 33344 899999 43 22222221
Q ss_pred CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 347 EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 347 e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
..-...-+++ ....+.||+.+.-+- + -.|+..++..|+|+|++.
T Consensus 148 ~~~~~ll~~i---~~~~~iPViaaGGI~---------~---~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 148 LTTMTLVRQV---ATAISIPVIAAGGIA---------D---GEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp SCHHHHHHHH---HHHCSSCEEEESSCC---------S---HHHHHHHHHTTCSEEEEC
T ss_pred ccHHHHHHHH---HHhcCCCEEEECCCC---------C---HHHHHHHHHcCCCEEEec
Confidence 1111222222 234589999876432 2 246677888999999985
No 46
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.02 E-value=1 Score=48.94 Aligned_cols=123 Identities=16% Similarity=0.226 Sum_probs=75.6
Q ss_pred ccCHHHHHHHHHcCCCEEEec--CcCChhhHHHHHHHHhccCCCCceEEee-ecCHHHHhcHHHHHhc-CCEEEEeCCCC
Q 008172 265 KKDWDDIEFGIAEGVDFIAMS--FVCDADSVRHLKKYVSGKSSRSIKVLAK-IENLESLQKFEEIVEA-SDGIMVARGDL 340 (575)
Q Consensus 265 ekD~~di~~al~~gvd~I~~S--fV~sa~dv~~ir~~l~~~~~~~i~IIaK-IEt~~av~nldeI~~~-sDgImIaRGDL 340 (575)
+.+.+.++..++.|+|+|.+- +-.+......++. +.+.. .++.|++. +-+.+.... ..+. +|+|.|+-|.=
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~-i~~~~-p~~~Vi~g~v~t~e~a~~---l~~aGaD~I~vg~g~G 302 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRW-VKQTF-PDVQVIGGNIATAEAAKA---LAEAGADAVKVGIGPG 302 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHH-HHHHC-TTSEEEEEEECSHHHHHH---HHHTTCSEEEECSSCS
T ss_pred cchHHHHHHHhhcccceEEecccCCcchhHHHHHHH-HHHHC-CCceEEEeeeCcHHHHHH---HHHcCCCEEEECCCCC
Confidence 455778888899999999863 3333322222222 32222 24667775 777766533 3444 99999964431
Q ss_pred CC-------CCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 341 GV-------DIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 341 g~-------e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
+. ..+.+. ..+-.++.+.|++.+.|+|.+.-+- -..|++.|+..|||++|+.
T Consensus 303 s~~~t~~~~g~g~p~-~~~l~~v~~~~~~~~iPVIa~GGI~------------~~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 303 SICTTRIVAGVGVPQ-ISAIANVAAALEGTGVPLIADGGIR------------FSGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp TTCHHHHHTCBCCCH-HHHHHHHHHHHTTTTCCEEEESCCC------------SHHHHHHHHHHTCSEEEEC
T ss_pred cCCCccccCCCCccH-HHHHHHHHHHhccCCCcEEEeCCCC------------CHHHHHHHHHcCCCeeeec
Confidence 11 112222 2333566677777799999865443 3468889999999999996
No 47
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=91.67 E-value=1.2 Score=46.76 Aligned_cols=118 Identities=16% Similarity=0.267 Sum_probs=71.8
Q ss_pred ccCHHHHHHHHHcCCCEEEe--cCcCCh---hhHHHHHHHHhccCCCCceEEee-ecCHHHHhcHHHHHhc-CCEEEEeC
Q 008172 265 KKDWDDIEFGIAEGVDFIAM--SFVCDA---DSVRHLKKYVSGKSSRSIKVLAK-IENLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 265 ekD~~di~~al~~gvd~I~~--SfV~sa---~dv~~ir~~l~~~~~~~i~IIaK-IEt~~av~nldeI~~~-sDgImIaR 337 (575)
+.+.+.++.+++.|+|+|.+ ++-.+. +.++.+|+.. ..+.|+++ +-|.+.... ..+. +|+|.|+-
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~-----~~~~Vi~G~V~T~e~A~~---a~~aGaD~I~Vg~ 170 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLL-----GSRCIMAGNVATYAGADY---LASCGADIIKAGI 170 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHH-----TTCEEEEEEECSHHHHHH---HHHTTCSEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhc-----CCCeEEEcCcCCHHHHHH---HHHcCCCEEEEcC
Confidence 34567788899999999987 332222 2344444432 24789996 877765433 3344 99999952
Q ss_pred CCCCCCCC-----CCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 338 GDLGVDIP-----LEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 338 GDLg~e~~-----~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
|- |-.+. -..+| |-..+..|.+..+|||.+.-+- .-.|+..|+..|||+||+.
T Consensus 171 g~-G~~~~tr~~~g~g~p--~l~aI~~~~~~~~PVIAdGGI~------------~~~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 171 GG-GSVCSTRIKTGFGVP--MLTCIQDCSRADRSIVADGGIK------------TSGDIVKALAFGADFVMIG 228 (361)
T ss_dssp SS-SSCHHHHHHHCCCCC--HHHHHHHHTTSSSEEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred CC-CcCccccccCCccHH--HHHHHHHHHHhCCCEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 21 11100 00122 4445555555555998754332 3468899999999999995
No 48
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=91.45 E-value=3 Score=40.70 Aligned_cols=133 Identities=17% Similarity=0.082 Sum_probs=80.2
Q ss_pred CHHHHHHHHHcCCCEEEecC--cCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCC
Q 008172 267 DWDDIEFGIAEGVDFIAMSF--VCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVD 343 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~Sf--V~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e 343 (575)
+.+++..+++.|+|+|.+.- ..+++.+.++.+.+++.+ +.+++.+-+.+-. ....+. +|.|-+.--++...
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g---~~v~~~v~t~eea---~~a~~~Gad~Ig~~~~g~t~~ 163 (232)
T 3igs_A 90 FLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHH---LLTMADCSSVDDG---LACQRLGADIIGTTMSGYTTP 163 (232)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTT---CEEEEECCSHHHH---HHHHHTTCSEEECTTTTSSSS
T ss_pred cHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCC---CEEEEeCCCHHHH---HHHHhCCCCEEEEcCccCCCC
Confidence 45677888999999997643 346778888887777654 6777776654333 223333 78886532112111
Q ss_pred --CCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHH
Q 008172 344 --IPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVL 421 (575)
Q Consensus 344 --~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m 421 (575)
...+.+.. ++..++.+.|++...- .-|. .|+..+...|+|+++.. +++.+ |-+..+.+
T Consensus 164 ~~~~~~~~~~-----i~~l~~~~ipvIA~GG---------I~t~---~d~~~~~~~GadgV~VG--sal~~-p~~~~~~~ 223 (232)
T 3igs_A 164 DTPEEPDLPL-----VKALHDAGCRVIAEGR---------YNSP---ALAAEAIRYGAWAVTVG--SAITR-LEHICGWY 223 (232)
T ss_dssp SCCSSCCHHH-----HHHHHHTTCCEEEESC---------CCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHH
T ss_pred CCCCCCCHHH-----HHHHHhcCCcEEEECC---------CCCH---HHHHHHHHcCCCEEEEe--hHhcC-HHHHHHHH
Confidence 12233322 2223333899997542 3333 46667777899999996 55554 77666666
Q ss_pred HHHH
Q 008172 422 QMAS 425 (575)
Q Consensus 422 ~~I~ 425 (575)
....
T Consensus 224 ~~~i 227 (232)
T 3igs_A 224 NDAL 227 (232)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 49
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=91.30 E-value=2.9 Score=39.71 Aligned_cols=136 Identities=12% Similarity=0.110 Sum_probs=74.7
Q ss_pred CHHHHHHHHHcCCCEEEecCcC--Ch-hhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCC
Q 008172 267 DWDDIEFGIAEGVDFIAMSFVC--DA-DSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGV 342 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~SfV~--sa-~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~ 342 (575)
+.+.+..+++.|+|+|.+.... ++ +.+.++.+.+++.. ....++..+-+.+-.. ...+. +|.|++......-
T Consensus 77 ~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~-~~~~v~~~~~t~~e~~---~~~~~G~d~i~~~~~g~t~ 152 (223)
T 1y0e_A 77 TSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHA-PNVEIMADIATVEEAK---NAARLGFDYIGTTLHGYTS 152 (223)
T ss_dssp SHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHC-TTSEEEEECSSHHHHH---HHHHTTCSEEECTTTTSST
T ss_pred cHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhC-CCceEEecCCCHHHHH---HHHHcCCCEEEeCCCcCcC
Confidence 4567788899999999876543 22 24444444444331 2356666766644322 22233 8999986543321
Q ss_pred C-CCCC-ChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHH
Q 008172 343 D-IPLE-QIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSV 420 (575)
Q Consensus 343 e-~~~e-~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~ 420 (575)
. .+.. ..+. .+.+-+.+...+.|++...- .-+. .|+..+...|+|++++. +++-+ |.++.+.
T Consensus 153 ~~~~~~~~~~~-~~~~~~~~~~~~ipvia~GG---------I~~~---~~~~~~~~~Gad~v~vG--~al~~-p~~~~~~ 216 (223)
T 1y0e_A 153 YTQGQLLYQND-FQFLKDVLQSVDAKVIAEGN---------VITP---DMYKRVMDLGVHCSVVG--GAITR-PKEITKR 216 (223)
T ss_dssp TSTTCCTTHHH-HHHHHHHHHHCCSEEEEESS---------CCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHH
T ss_pred CCCCCCCCccc-HHHHHHHHhhCCCCEEEecC---------CCCH---HHHHHHHHcCCCEEEEC--hHHcC-cHHHHHH
Confidence 1 1111 2222 22333334456899997543 2233 35566677899999996 33333 6555554
Q ss_pred HH
Q 008172 421 LQ 422 (575)
Q Consensus 421 m~ 422 (575)
+.
T Consensus 217 ~~ 218 (223)
T 1y0e_A 217 FV 218 (223)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 50
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=90.99 E-value=2.7 Score=41.14 Aligned_cols=138 Identities=12% Similarity=0.064 Sum_probs=85.1
Q ss_pred HHHHHHHcCCCEEEecCcC-ChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEE---eCCCCCCCCC
Q 008172 270 DIEFGIAEGVDFIAMSFVC-DADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMV---ARGDLGVDIP 345 (575)
Q Consensus 270 di~~al~~gvd~I~~SfV~-sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImI---aRGDLg~e~~ 345 (575)
.++.+.+.|+|+|.+..-. + ..+.++.+.+++.| ..+.+...-.|+ ++.++++++.+|.+++ .+|==|..+.
T Consensus 72 ~i~~~~~aGAd~itvh~Ea~~-~~~~~~i~~i~~~G-~k~gv~lnp~tp--~~~~~~~l~~~D~VlvmsV~pGfggQ~f~ 147 (231)
T 3ctl_A 72 YIAQLARAGADFITLHPETIN-GQAFRLIDEIRRHD-MKVGLILNPETP--VEAMKYYIHKADKITVMTVDPGFAGQPFI 147 (231)
T ss_dssp THHHHHHHTCSEEEECGGGCT-TTHHHHHHHHHHTT-CEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCTTCSSCCCC
T ss_pred HHHHHHHcCCCEEEECcccCC-ccHHHHHHHHHHcC-CeEEEEEECCCc--HHHHHHHHhcCCEEEEeeeccCcCCcccc
Confidence 4788899999999988654 4 46777788887776 444454444454 7778888999999985 3332232332
Q ss_pred CCChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec-cCcCCCCC-HHHHHHHH
Q 008172 346 LEQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS-GESAIGPF-GQKAVSVL 421 (575)
Q Consensus 346 ~e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs-~ETa~G~y-PveaV~~m 421 (575)
+....--+++-+.+.+. +.++.+..- -.|.. +..++..|+|.+... +--..... |.++++.+
T Consensus 148 -~~~l~kI~~lr~~~~~~~~~~~I~VdGG--------I~~~~-----~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l 213 (231)
T 3ctl_A 148 -PEMLDKLAELKAWREREGLEYEIEVDGS--------CNQAT-----YEKLMAAGADVFIVGTSGLFNHAENIDEAWRIM 213 (231)
T ss_dssp -TTHHHHHHHHHHHHHHHTCCCEEEEESC--------CSTTT-----HHHHHHHTCCEEEECTTTTGGGCSSHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHhccCCCceEEEECC--------cCHHH-----HHHHHHcCCCEEEEccHHHhCCCCcHHHHHHHH
Confidence 33333333444444433 456555321 12332 356677899999986 44332335 88999988
Q ss_pred HHHH
Q 008172 422 QMAS 425 (575)
Q Consensus 422 ~~I~ 425 (575)
++..
T Consensus 214 ~~~~ 217 (231)
T 3ctl_A 214 TAQI 217 (231)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 51
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=90.98 E-value=1.6 Score=41.30 Aligned_cols=137 Identities=9% Similarity=0.062 Sum_probs=78.2
Q ss_pred HHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEE-eCC-CC-CCCCCC
Q 008172 270 DIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMV-ARG-DL-GVDIPL 346 (575)
Q Consensus 270 di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImI-aRG-DL-g~e~~~ 346 (575)
.++.+.+.|+|+|.+.--.. ++..++.+.+.+.| ..++.-+......+.+.++...+|.+++ +.+ -+ |..++.
T Consensus 76 ~i~~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~g---~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~ 151 (220)
T 2fli_A 76 YVEAFAQAGADIMTIHTEST-RHIHGALQKIKAAG---MKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIP 151 (220)
T ss_dssp GHHHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTT---SEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCG
T ss_pred HHHHHHHcCCCEEEEccCcc-ccHHHHHHHHHHcC---CcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccCH
Confidence 46888999999998866555 55666666665554 3344445322233445555666898866 322 11 222222
Q ss_pred CChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHH
Q 008172 347 EQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMA 424 (575)
Q Consensus 347 e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I 424 (575)
....--+++-+.+.+. +.|++++--+ .| .++..+...|+|++..+.---.+..|.++++.+++.
T Consensus 152 -~~~~~i~~~~~~~~~~~~~~~i~v~GGI--------~~-----~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~~ 217 (220)
T 2fli_A 152 -ECLEKVATVAKWRDEKGLSFDIEVDGGV--------DN-----KTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTA 217 (220)
T ss_dssp -GGHHHHHHHHHHHHHTTCCCEEEEESSC--------CT-----TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHhcCCCceEEEECcC--------CH-----HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 1112123333333333 5777764321 22 344556667999999976555567798888877643
No 52
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=90.76 E-value=3.3 Score=44.99 Aligned_cols=119 Identities=19% Similarity=0.259 Sum_probs=74.8
Q ss_pred CHHHHHHHHHcCCCEEEe--cCcCCh---hhHHHHHHHHhccCCCCceEEee-ecCHHHHhcHHHHHhc-CCEEEEeC--
Q 008172 267 DWDDIEFGIAEGVDFIAM--SFVCDA---DSVRHLKKYVSGKSSRSIKVLAK-IENLESLQKFEEIVEA-SDGIMVAR-- 337 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~--SfV~sa---~dv~~ir~~l~~~~~~~i~IIaK-IEt~~av~nldeI~~~-sDgImIaR-- 337 (575)
..+.++.+++.|+|+|.+ ++-... +.++++++.+ .++.|+++ +.+.+....+. +. +|+|.++.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~-----~~~pvi~~~v~t~~~a~~l~---~aGad~I~vg~~~ 327 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY-----PHLQVIGGNVVTAAQAKNLI---DAGVDGLRVGMGC 327 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHC-----TTCEEEEEEECSHHHHHHHH---HHTCSEEEECSSC
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhC-----CCCceEecccchHHHHHHHH---HcCCCEEEECCCC
Confidence 467778889999999998 432221 3344444433 24678875 87776654443 33 89999954
Q ss_pred CCCCCC-----CCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEecc
Q 008172 338 GDLGVD-----IPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 338 GDLg~e-----~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ 406 (575)
|--... .+.+ .+.....+.+.+...+.|||.+.-+- ...|+..++..|||++|+..
T Consensus 328 G~~~~t~~~~~~g~~-~~~~~~~~~~~~~~~~ipVia~GGI~------------~~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 328 GSICITQEVMACGRP-QGTAVYKVAEYARRFGVPIIADGGIQ------------TVGHVVKALALGASTVMMGS 388 (514)
T ss_dssp SCCBTTBCCCSCCCC-HHHHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred CcccccccccCCCcc-chhHHHHHHHHHhhCCCCEEEECCCC------------CHHHHHHHHHcCCCeeeECH
Confidence 211000 1111 23344555566667799999865433 34688999999999999964
No 53
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=90.35 E-value=2.7 Score=39.48 Aligned_cols=131 Identities=12% Similarity=0.129 Sum_probs=75.1
Q ss_pred HHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeee--cCHHH-HhcHHHHHhcCCEEEEeCCCCCCCCCCC
Q 008172 271 IEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKI--ENLES-LQKFEEIVEASDGIMVARGDLGVDIPLE 347 (575)
Q Consensus 271 i~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKI--Et~~a-v~nldeI~~~sDgImIaRGDLg~e~~~e 347 (575)
++.+.+.|+|+|.++.-...+.+.++++.+++.| ..+. ++-. .|++. ++.+.+. -.|.+-+.++-.+...+..
T Consensus 70 ~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g-~~~g-v~~~s~~~p~~~~~~~~~~--g~d~v~~~~~~~~~~~g~~ 145 (207)
T 3ajx_A 70 ADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHN-KGVV-VDLIGIEDKATRAQEVRAL--GAKFVEMHAGLDEQAKPGF 145 (207)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT-CEEE-EECTTCSSHHHHHHHHHHT--TCSEEEEECCHHHHTSTTC
T ss_pred HHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcC-CceE-EEEecCCChHHHHHHHHHh--CCCEEEEEecccccccCCC
Confidence 5778999999999876666678888888887765 2221 2222 23332 2333221 2788834334322222222
Q ss_pred ChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHH
Q 008172 348 QIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQ 422 (575)
Q Consensus 348 ~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~ 422 (575)
-.. +++-+.+.. ..|+++.--+ .|. .+..++..|+|++....--.....|.++++.++
T Consensus 146 ~~~---~~i~~~~~~-~~pi~v~GGI--------~~~-----~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~ 203 (207)
T 3ajx_A 146 DLN---GLLAAGEKA-RVPFSVAGGV--------KVA-----TIPAVQKAGAEVAVAGGAIYGAADPAAAAKELR 203 (207)
T ss_dssp CTH---HHHHHHHHH-TSCEEEESSC--------CGG-----GHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHH
T ss_pred chH---HHHHHhhCC-CCCEEEECCc--------CHH-----HHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHH
Confidence 111 444444433 6788764221 121 556678899999998644433456877777654
No 54
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=90.24 E-value=2.8 Score=42.86 Aligned_cols=112 Identities=21% Similarity=0.271 Sum_probs=70.1
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCCC-
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVDIP- 345 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e~~- 345 (575)
.+.++.+++.|+|+|.+.+=...+.++.+++ . .+.++.++-+.+-... ..+. +|+|.+--.+.|-..+
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g~p~~~~~~l~~----~---g~~v~~~v~s~~~a~~---a~~~GaD~i~v~g~~~GG~~G~ 161 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAGNPTKYIRELKE----N---GTKVIPVVASDSLARM---VERAGADAVIAEGMESGGHIGE 161 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESSCCHHHHHHHHH----T---TCEEEEEESSHHHHHH---HHHTTCSCEEEECTTSSEECCS
T ss_pred HHHHHHHHHCCCCEEEECCCCcHHHHHHHHH----c---CCcEEEEcCCHHHHHH---HHHcCCCEEEEECCCCCccCCC
Confidence 4566778899999999988665544444443 3 3788999877655443 3334 8999994223333323
Q ss_pred CCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 346 LEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 346 ~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
...+ . .+-+.....+.|++.+.-+- ...|+..++..|+|++++.
T Consensus 162 ~~~~-~---ll~~i~~~~~iPviaaGGI~------------~~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 162 VTTF-V---LVNKVSRSVNIPVIAAGGIA------------DGRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp SCHH-H---HHHHHHHHCSSCEEEESSCC------------SHHHHHHHHHHTCSEEEES
T ss_pred ccHH-H---HHHHHHHHcCCCEEEECCCC------------CHHHHHHHHHhCCCEEEec
Confidence 1221 1 11222334589999875432 2356788888999999986
No 55
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=89.92 E-value=1.4 Score=44.24 Aligned_cols=153 Identities=12% Similarity=0.062 Sum_probs=94.8
Q ss_pred CCCccCHHHHHH-HHHcCCCEEEecCcCChh------hHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEE
Q 008172 262 TLSKKDWDDIEF-GIAEGVDFIAMSFVCDAD------SVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGI 333 (575)
Q Consensus 262 ~lsekD~~di~~-al~~gvd~I~~SfV~sa~------dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgI 333 (575)
.++..++..|-. +.+.|++.|-+.+-.+++ +..++-+.+.+. .++.+.+-.-+. +.++..++. .|.|
T Consensus 22 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~--~~~~v~~l~~n~---~~i~~a~~~G~~~V 96 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA--DGVRYSVLVPNM---KGYEAAAAAHADEI 96 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC--SSSEEEEECSSH---HHHHHHHHTTCSEE
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC--CCCEEEEEeCCH---HHHHHHHHCCCCEE
Confidence 367677655544 456899999885533343 444544444433 356665655443 344444444 7888
Q ss_pred EEeCCCCCC---------CCCCCChHHHHHHHHHHHHHcCCCEE--EehhhHHhhhcCCCCChhhHhhHHH-HHHcccce
Q 008172 334 MVARGDLGV---------DIPLEQIPTVQEIIIHVCRQLNKPVI--VASQLLESMVEYPTPTRAEVADVSE-AVRQYADA 401 (575)
Q Consensus 334 mIaRGDLg~---------e~~~e~v~~~Qk~Ii~~c~~~gKPvi--vaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~ 401 (575)
+|. ++. ..+.++.....+++++.|+++|.+|- +.+-. +.....+-+..++.+++. +...|+|.
T Consensus 97 ~i~---~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~--~~e~~~~~~~~~~~~~~~~~~~~G~d~ 171 (295)
T 1ydn_A 97 AVF---ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVV--ECPYDGPVTPQAVASVTEQLFSLGCHE 171 (295)
T ss_dssp EEE---EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSS--EETTTEECCHHHHHHHHHHHHHHTCSE
T ss_pred EEE---EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEe--cCCcCCCCCHHHHHHHHHHHHhcCCCE
Confidence 884 222 24566677777889999999999986 32210 000112345566666665 55789999
Q ss_pred EEeccCcCCCCCHHHHHHHHHHHH
Q 008172 402 LMLSGESAIGPFGQKAVSVLQMAS 425 (575)
Q Consensus 402 vmLs~ETa~G~yPveaV~~m~~I~ 425 (575)
+.|. +|.=...|-+.-+.++.+.
T Consensus 172 i~l~-Dt~G~~~P~~~~~lv~~l~ 194 (295)
T 1ydn_A 172 VSLG-DTIGRGTPDTVAAMLDAVL 194 (295)
T ss_dssp EEEE-ETTSCCCHHHHHHHHHHHH
T ss_pred EEec-CCCCCcCHHHHHHHHHHHH
Confidence 9998 4555567988877777664
No 56
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=89.44 E-value=6.2 Score=40.84 Aligned_cols=112 Identities=13% Similarity=0.205 Sum_probs=67.7
Q ss_pred HHHHHHHHHcCCCEEEecCcCC-hhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEE-eCCCCCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCD-ADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMV-ARGDLGVDI 344 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~s-a~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImI-aRGDLg~e~ 344 (575)
.+.++.+++.|+|+|.+.|=.. .+.++++++ . .+.++.++-+.+-.. ...+. +|+|.+ ++. .|-..
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~----~---g~~v~~~v~t~~~a~---~a~~~GaD~i~v~g~~-~GGh~ 180 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVPDREVIARLRR----A---GTLTLVTATTPEEAR---AVEAAGADAVIAQGVE-AGGHQ 180 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCCCHHHHHHHHH----T---TCEEEEEESSHHHHH---HHHHTTCSEEEEECTT-CSEEC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcHHHHHHHHH----C---CCeEEEECCCHHHHH---HHHHcCCCEEEEeCCC-cCCcC
Confidence 4567788999999999987543 455555543 2 357888887765322 22233 899999 542 22221
Q ss_pred CC-----------CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 345 PL-----------EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 345 ~~-----------e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
+. ......-+++ ....+.||+.+.-+- + -.++..++..|+|+|++.
T Consensus 181 g~~~~~~~~~~~~~~~~~~l~~i---~~~~~iPViaaGGI~---------~---~~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 181 GTHRDSSEDDGAGIGLLSLLAQV---REAVDIPVVAAGGIM---------R---GGQIAAVLAAGADAAQLG 237 (369)
T ss_dssp CCSSCCGGGTTCCCCHHHHHHHH---HHHCSSCEEEESSCC---------S---HHHHHHHHHTTCSEEEES
T ss_pred CCcccccccccccccHHHHHHHH---HHhcCceEEEECCCC---------C---HHHHHHHHHcCCCEEEEC
Confidence 11 0111222222 234589999876432 2 246677888999999996
No 57
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=89.17 E-value=1.1 Score=43.77 Aligned_cols=138 Identities=12% Similarity=0.140 Sum_probs=79.0
Q ss_pred HHHHHHHHcCCCEEEecCc--CChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCC--C
Q 008172 269 DDIEFGIAEGVDFIAMSFV--CDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVD--I 344 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV--~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e--~ 344 (575)
+.++.+.+.|+|+|.+..- .+ +...+..+.+.+.| ..+.+...-.|+ .+.+.++++.+|.|.+..-.-|.. -
T Consensus 76 ~~i~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~g-~~~gv~~~p~t~--~e~~~~~~~~~D~v~~msv~pg~ggq~ 151 (230)
T 1tqj_A 76 KYVEDFAKAGADIISVHVEHNAS-PHLHRTLCQIRELG-KKAGAVLNPSTP--LDFLEYVLPVCDLILIMSVNPGFGGQS 151 (230)
T ss_dssp GTHHHHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHTT-CEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCC----CC
T ss_pred HHHHHHHHcCCCEEEECcccccc-hhHHHHHHHHHHcC-CcEEEEEeCCCc--HHHHHHHHhcCCEEEEEEeccccCCcc
Confidence 3567889999999998865 44 45555555565555 333333333454 556778888899888775444322 1
Q ss_pred CCCChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHH
Q 008172 345 PLEQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQ 422 (575)
Q Consensus 345 ~~e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~ 422 (575)
-.+....--+++-+.+.+. +.|+.+..-+ .+. .+......|+|++....--...+.|.++++.++
T Consensus 152 ~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI--------~~~-----~~~~~~~aGad~vvvGSai~~a~d~~~~~~~l~ 218 (230)
T 1tqj_A 152 FIPEVLPKIRALRQMCDERGLDPWIEVDGGL--------KPN-----NTWQVLEAGANAIVAGSAVFNAPNYAEAIAGVR 218 (230)
T ss_dssp CCGGGHHHHHHHHHHHHHHTCCCEEEEESSC--------CTT-----TTHHHHHHTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCcEEEECCc--------CHH-----HHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHH
Confidence 1122233333443333332 6777764321 222 224455679999998644333446888887765
Q ss_pred H
Q 008172 423 M 423 (575)
Q Consensus 423 ~ 423 (575)
+
T Consensus 219 ~ 219 (230)
T 1tqj_A 219 N 219 (230)
T ss_dssp T
T ss_pred H
Confidence 4
No 58
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=88.57 E-value=4.5 Score=41.09 Aligned_cols=114 Identities=14% Similarity=0.184 Sum_probs=67.3
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEE-eCCCCCCCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMV-ARGDLGVDIPL 346 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImI-aRGDLg~e~~~ 346 (575)
.+.++.+++.|+|+|.+.+=...+.++.++ +. .+.++.++-+.+.... ....-+|+|.+ ++ .-|-..+.
T Consensus 86 ~~~~~~~~~~g~d~V~~~~g~p~~~~~~l~----~~---gi~vi~~v~t~~~a~~--~~~~GaD~i~v~g~-~~GG~~G~ 155 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAGNDPGEHIAEFR----RH---GVKVIHKCTAVRHALK--AERLGVDAVSIDGF-ECAGHPGE 155 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEESCCHHHHHHHH----HT---TCEEEEEESSHHHHHH--HHHTTCSEEEEECT-TCSBCCCS
T ss_pred HHHHHHHHhcCCCEEEEcCCCcHHHHHHHH----Hc---CCCEEeeCCCHHHHHH--HHHcCCCEEEEECC-CCCcCCCC
Confidence 356778889999999998755444444443 33 3678888877654332 11223899999 43 22222221
Q ss_pred CChHHHHHHHHHHHH-HcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 347 EQIPTVQEIIIHVCR-QLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 347 e~v~~~Qk~Ii~~c~-~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
...+.. ..+...+ ..+.||+.+.-+- + -.|+..++..|+|++++.
T Consensus 156 ~~~~~~--~~l~~v~~~~~iPviaaGGI~---------~---~~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 156 DDIPGL--VLLPAAANRLRVPIIASGGFA---------D---GRGLVAALALGADAINMG 201 (328)
T ss_dssp SCCCHH--HHHHHHHTTCCSCEEEESSCC---------S---HHHHHHHHHHTCSEEEES
T ss_pred ccccHH--HHHHHHHHhcCCCEEEECCCC---------C---HHHHHHHHHcCCCEEEEC
Confidence 111111 2233333 3489999876432 2 236677788899999986
No 59
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=88.37 E-value=0.32 Score=53.37 Aligned_cols=93 Identities=12% Similarity=0.230 Sum_probs=75.3
Q ss_pred cCCCEEEecCcCChhhHHHHHHHHhc--------cC----CCCceEEeeecCHHHHhcHHHHHhc--C-----------C
Q 008172 277 EGVDFIAMSFVCDADSVRHLKKYVSG--------KS----SRSIKVLAKIENLESLQKFEEIVEA--S-----------D 331 (575)
Q Consensus 277 ~gvd~I~~SfV~sa~dv~~ir~~l~~--------~~----~~~i~IIaKIEt~~av~nldeI~~~--s-----------D 331 (575)
..+-.+++||.++++|+.++..++++ .+ ...+.||.=+||.+.+.|.++|++. . =
T Consensus 138 ~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~Q 217 (560)
T 3odm_A 138 PAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDL 217 (560)
T ss_dssp CSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEE
T ss_pred cccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeE
Confidence 35667999999999999998776632 12 1357899999999999999999876 1 3
Q ss_pred EEEEeCCCCCCCCCC----CChHHHHHHHHHHHHHcCCCEEE
Q 008172 332 GIMVARGDLGVDIPL----EQIPTVQEIIIHVCRQLNKPVIV 369 (575)
Q Consensus 332 gImIaRGDLg~e~~~----e~v~~~Qk~Ii~~c~~~gKPviv 369 (575)
-||+|+.|=+.+.|+ =.+..+|.++.+.|+++|.++-.
T Consensus 218 eVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~l 259 (560)
T 3odm_A 218 RIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISP 259 (560)
T ss_dssp EEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 589998887777775 46788999999999999998764
No 60
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=88.27 E-value=2.6 Score=44.50 Aligned_cols=113 Identities=15% Similarity=0.184 Sum_probs=82.9
Q ss_pred HHHHHHHHHcCCCEEEecCcC-----------ChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEe
Q 008172 268 WDDIEFGIAEGVDFIAMSFVC-----------DADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVA 336 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~-----------sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIa 336 (575)
.+.++.+.+.|+|+|...--. ..+..+.++++..+.| +.+++-+-+.+.++-+. +.+|.+-||
T Consensus 159 ~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~G---l~~~te~~d~~~~~~l~---~~vd~lkIg 232 (385)
T 3nvt_A 159 AAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYG---LGVISEIVTPADIEVAL---DYVDVIQIG 232 (385)
T ss_dssp HHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT---CEEEEECCSGGGHHHHT---TTCSEEEEC
T ss_pred HHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcC---CEEEEecCCHHHHHHHH---hhCCEEEEC
Confidence 344566778999998654311 2577888888887776 78999998887766554 559999999
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHc-ccceEEec
Q 008172 337 RGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQ-YADALMLS 405 (575)
Q Consensus 337 RGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~-G~D~vmLs 405 (575)
-+++. + ..+++++.+.||||++.|.|. .|..|+...+..+.. |.+=++|.
T Consensus 233 s~~~~------n-----~~LL~~~a~~gkPVilk~G~~--------~t~~e~~~Ave~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 233 ARNMQ------N-----FELLKAAGRVDKPILLKRGLS--------ATIEEFIGAAEYIMSQGNGKIILC 283 (385)
T ss_dssp GGGTT------C-----HHHHHHHHTSSSCEEEECCTT--------CCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred ccccc------C-----HHHHHHHHccCCcEEEecCCC--------CCHHHHHHHHHHHHHcCCCeEEEE
Confidence 77762 2 256777888999999987653 788888888887754 77666665
No 61
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=88.08 E-value=3.1 Score=43.21 Aligned_cols=123 Identities=21% Similarity=0.218 Sum_probs=71.0
Q ss_pred CHHHHHHHHHc--CCCEEEecCc-CChhhHHHHHHHHhccCCCCceEEee-ecCHHHHhcHHHHHhc-CCEEEEeCCCCC
Q 008172 267 DWDDIEFGIAE--GVDFIAMSFV-CDADSVRHLKKYVSGKSSRSIKVLAK-IENLESLQKFEEIVEA-SDGIMVARGDLG 341 (575)
Q Consensus 267 D~~di~~al~~--gvd~I~~SfV-~sa~dv~~ir~~l~~~~~~~i~IIaK-IEt~~av~nldeI~~~-sDgImIaRGDLg 341 (575)
+.+.+...++. |+|.+.+.+- ....++.+.-+.+++.. ..+.|+++ +-+.+.. ....+. +|+|.|+-|-=+
T Consensus 119 ~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~-~~~~vi~g~v~t~e~A---~~a~~aGaD~I~v~~g~G~ 194 (351)
T 2c6q_A 119 DFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRF-PQHTIMAGNVVTGEMV---EELILSGADIIKVGIGPGS 194 (351)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHC-TTSEEEEEEECSHHHH---HHHHHTTCSEEEECSSCST
T ss_pred HHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhc-CCCeEEEEeCCCHHHH---HHHHHhCCCEEEECCCCCc
Confidence 34555666776 9999876432 22333333333333332 24566654 6665433 333444 899999643210
Q ss_pred CC-------CCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEecc
Q 008172 342 VD-------IPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 342 ~e-------~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ 406 (575)
.+ .+.+. ...-..+.+.+...+.|||.+.-+- --.|++.|+..|||+|++..
T Consensus 195 ~~~~r~~~g~~~p~-~~~l~~v~~~~~~~~ipvIa~GGI~------------~g~di~kAlalGA~~V~vG~ 253 (351)
T 2c6q_A 195 VCTTRKKTGVGYPQ-LSAVMECADAAHGLKGHIISDGGCS------------CPGDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp TBCHHHHHCBCCCH-HHHHHHHHHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred CcCccccCCCCccH-HHHHHHHHHHHhhcCCcEEEeCCCC------------CHHHHHHHHHcCCCceeccH
Confidence 11 01121 2233566677777899999876544 35788999999999999864
No 62
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=87.42 E-value=2.2 Score=41.62 Aligned_cols=129 Identities=14% Similarity=0.047 Sum_probs=75.9
Q ss_pred CHHHHHHHHHcCCCEEEecC--cCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCC-
Q 008172 267 DWDDIEFGIAEGVDFIAMSF--VCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGV- 342 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~Sf--V~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~- 342 (575)
+.+++..+++.|+|+|.+-- ..+++.+.++.+.+++.+ +.+++.+-+.+-. ....+. +|.|-+.--++..
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g---~~v~~~v~t~eea---~~a~~~Gad~Ig~~~~g~t~~ 163 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHG---LLAMADCSTVNEG---ISCHQKGIEFIGTTLSGYTGP 163 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTT---CEEEEECSSHHHH---HHHHHTTCSEEECTTTTSSSS
T ss_pred cHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCC---CEEEEecCCHHHH---HHHHhCCCCEEEecCccCCCC
Confidence 45677888999999997643 346778888877776654 6777776554333 222333 8888653212211
Q ss_pred -CCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHH
Q 008172 343 -DIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVL 421 (575)
Q Consensus 343 -e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m 421 (575)
....+.+ ..++...+.+.|+|... ..-|. .|+..+...|+|+++.. +++.+ |-...+++
T Consensus 164 ~~~~~~~~-----~li~~l~~~~ipvIA~G---------GI~t~---~d~~~~~~~GadgV~VG--sai~~-p~~~~~~f 223 (229)
T 3q58_A 164 ITPVEPDL-----AMVTQLSHAGCRVIAEG---------RYNTP---ALAANAIEHGAWAVTVG--SAITR-IEHICQWF 223 (229)
T ss_dssp CCCSSCCH-----HHHHHHHTTTCCEEEES---------SCCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHH
T ss_pred CcCCCCCH-----HHHHHHHHcCCCEEEEC---------CCCCH---HHHHHHHHcCCCEEEEc--hHhcC-hHHHHHHH
Confidence 1122333 22222233389999753 33344 45666777899999996 55544 54444443
No 63
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=87.01 E-value=0.95 Score=53.08 Aligned_cols=99 Identities=20% Similarity=0.163 Sum_probs=83.0
Q ss_pred HHHHHcC---CCEEEecCcCChhhHHHHHHHHhccCCC-CceEEeeecCHHHHhcHHHHHhc--C-----------CEEE
Q 008172 272 EFGIAEG---VDFIAMSFVCDADSVRHLKKYVSGKSSR-SIKVLAKIENLESLQKFEEIVEA--S-----------DGIM 334 (575)
Q Consensus 272 ~~al~~g---vd~I~~SfV~sa~dv~~ir~~l~~~~~~-~i~IIaKIEt~~av~nldeI~~~--s-----------DgIm 334 (575)
+.+.+.| +..+++||.++++|+.++--+.++.|.. .+.|+.=.||.+.++|.++|++. + =-||
T Consensus 519 ~~i~~~g~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~QeVM 598 (970)
T 1jqo_A 519 HVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVM 598 (970)
T ss_dssp HHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEE
T ss_pred HHHHHhChhhhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEE
Confidence 4445556 4558899999999999999888877743 58999999999999999999987 2 2599
Q ss_pred EeCCCCCCCCCC----CChHHHHHHHHHHHHHcCCCEEEe
Q 008172 335 VARGDLGVDIPL----EQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 335 IaRGDLg~e~~~----e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
+|..|=+-+-|. =.+..+|+++.+.|+++|.++.+-
T Consensus 599 LGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lF 638 (970)
T 1jqo_A 599 VGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLF 638 (970)
T ss_dssp EESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred EecccccccccHHHHHHHHHHHHHHHHHHHHHcCCcEEEe
Confidence 999998888886 468889999999999999998753
No 64
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=86.28 E-value=2.3 Score=50.29 Aligned_cols=119 Identities=18% Similarity=0.274 Sum_probs=70.2
Q ss_pred HHHHHcCCCEEEecCc---------------CChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-----CC
Q 008172 272 EFGIAEGVDFIAMSFV---------------CDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-----SD 331 (575)
Q Consensus 272 ~~al~~gvd~I~~SfV---------------~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-----sD 331 (575)
+.+.+.|+|+|.+.+- ++++.+.++-+.+.+.- ++.|++|+ ++ .+.++.++++. +|
T Consensus 655 ~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~--~~Pv~vK~-~~-~~~~~~~~a~~~~~~G~d 730 (1025)
T 1gte_A 655 RKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV--QIPFFAKL-TP-NVTDIVSIARAAKEGGAD 730 (1025)
T ss_dssp HHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC--SSCEEEEE-CS-CSSCHHHHHHHHHHHTCS
T ss_pred HHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh--CCceEEEe-CC-ChHHHHHHHHHHHHcCCC
Confidence 4455789999998542 44555566655565442 47799998 22 33455555544 79
Q ss_pred EEEEe-----------------------CCCCCCCCCCCChHHHHHHHHHHHHHc-CCCEEEehhhHHhhhcCCCCChhh
Q 008172 332 GIMVA-----------------------RGDLGVDIPLEQIPTVQEIIIHVCRQL-NKPVIVASQLLESMVEYPTPTRAE 387 (575)
Q Consensus 332 gImIa-----------------------RGDLg~e~~~e~v~~~Qk~Ii~~c~~~-gKPvivaTq~LeSM~~~p~PtrAE 387 (575)
+|.+. |...+---+....+..-..+-+..++. +.|+|...-+- .
T Consensus 731 ~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~------------s 798 (1025)
T 1gte_A 731 GVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGID------------S 798 (1025)
T ss_dssp EEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCC------------S
T ss_pred EEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcC------------C
Confidence 99992 111111112222333333333334444 79999865433 3
Q ss_pred HhhHHHHHHcccceEEecc
Q 008172 388 VADVSEAVRQYADALMLSG 406 (575)
Q Consensus 388 v~Dv~nav~~G~D~vmLs~ 406 (575)
..|+..++..|+|+||+..
T Consensus 799 ~~da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 799 AESGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp HHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHHcCCCEEEEee
Confidence 4577888889999999964
No 65
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=86.02 E-value=9.1 Score=36.87 Aligned_cols=120 Identities=14% Similarity=0.145 Sum_probs=69.9
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEE-E-eC-CCCCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIM-V-AR-GDLGVDI 344 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgIm-I-aR-GDLg~e~ 344 (575)
.+.++.+++.|+|+|.++.. ..++.+++.+.+++.| ..++.-+......+.+..+.+.+|+++ + .+ |-.|..-
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~-~~~~~~~~~~~~~~~g---~~~~~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~ 173 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDL-PVFHAKEFTEIAREEG---IKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGARE 173 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTC-CGGGHHHHHHHHHHHT---CEEEEEECTTCCHHHHHHHHHHCSSEEEEECCC-------
T ss_pred HHHHHHHHHCCCCEEEECCC-ChhhHHHHHHHHHHhC---CCeEEEECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCC
Confidence 35778889999999999855 4577888888887776 234444443234455667777788433 2 22 2222221
Q ss_pred CCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 345 PLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 345 ~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
+ .-+...+.+-+.+...+.|+++..-+ -+ ..|+..+...|+|++.+.
T Consensus 174 ~--~~~~~~~~i~~l~~~~~~pi~~~GGI---------~~---~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 174 E--IPKTAYDLLRRAKRICRNKVAVGFGV---------SK---REHVVSLLKEGANGVVVG 220 (248)
T ss_dssp C--CCHHHHHHHHHHHHHCSSCEEEESCC---------CS---HHHHHHHHHTTCSEEEEC
T ss_pred C--CChhHHHHHHHHHhhcCCCEEEEeec---------CC---HHHHHHHHHcCCCEEEEc
Confidence 1 11333333333344458999875432 22 235566667899999975
No 66
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=85.72 E-value=14 Score=36.16 Aligned_cols=134 Identities=13% Similarity=0.100 Sum_probs=78.6
Q ss_pred HHHHHHHHHcCCCEEEecC-cCCh------hhHHHHHHHHhccCCCCceEEeee----------cCHHHHhcHHHHHhc-
Q 008172 268 WDDIEFGIAEGVDFIAMSF-VCDA------DSVRHLKKYVSGKSSRSIKVLAKI----------ENLESLQKFEEIVEA- 329 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~Sf-V~sa------~dv~~ir~~l~~~~~~~i~IIaKI----------Et~~av~nldeI~~~- 329 (575)
.+.++.+++.|+|+|.+.+ ..+. ++++++.+.+.+.+ +.++..+ -+. +++++.+..
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g---~~viv~~~~~G~~l~~~~~~---~~~~~~a~~a 175 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG---MPLIAMMYPRGKHIQNERDP---ELVAHAARLG 175 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT---CCEEEEEEECSTTCSCTTCH---HHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC---CCEEEEeCCCCcccCCCCCH---hHHHHHHHHH
Confidence 4567889999999993221 1222 24556666665554 3455544 222 234433222
Q ss_pred ----CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCC-ChhhHhh-HHHHHHcccceEE
Q 008172 330 ----SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTP-TRAEVAD-VSEAVRQYADALM 403 (575)
Q Consensus 330 ----sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~P-trAEv~D-v~nav~~G~D~vm 403 (575)
+|.|-++.+ ..+ ..-+ +.+...+.|++...-+ .+ +..+.-+ +..++..|+|+++
T Consensus 176 ~~~Gad~i~~~~~--------~~~-~~l~---~i~~~~~ipvva~GGi--------~~~~~~~~~~~~~~~~~~Ga~gv~ 235 (273)
T 2qjg_A 176 AELGADIVKTSYT--------GDI-DSFR---DVVKGCPAPVVVAGGP--------KTNTDEEFLQMIKDAMEAGAAGVA 235 (273)
T ss_dssp HHTTCSEEEECCC--------SSH-HHHH---HHHHHCSSCEEEECCS--------CCSSHHHHHHHHHHHHHHTCSEEE
T ss_pred HHcCCCEEEECCC--------CCH-HHHH---HHHHhCCCCEEEEeCC--------CCCCHHHHHHHHHHHHHcCCcEEE
Confidence 798888731 121 2222 3344558999975321 22 2333222 6667789999999
Q ss_pred eccCcCCCCCHHHHHHHHHHHHHH
Q 008172 404 LSGESAIGPFGQKAVSVLQMASSR 427 (575)
Q Consensus 404 Ls~ETa~G~yPveaV~~m~~I~~~ 427 (575)
....-.....|.++++.+..+.++
T Consensus 236 vg~~i~~~~~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 236 VGRNIFQHDDVVGITRAVCKIVHE 259 (273)
T ss_dssp CCHHHHTSSSHHHHHHHHHHHHHH
T ss_pred eeHHhhCCCCHHHHHHHHHHHHhc
Confidence 977666667899888887776643
No 67
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=85.55 E-value=5.8 Score=42.70 Aligned_cols=118 Identities=19% Similarity=0.305 Sum_probs=70.8
Q ss_pred CHHHHHHHHHcCCCEEEecCcC-----ChhhHHHHHHHHhccCCCCceEEe-eecCHHHHhcHHHHHhc-CCEEEEeCCC
Q 008172 267 DWDDIEFGIAEGVDFIAMSFVC-----DADSVRHLKKYVSGKSSRSIKVLA-KIENLESLQKFEEIVEA-SDGIMVARGD 339 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~SfV~-----sa~dv~~ir~~l~~~~~~~i~IIa-KIEt~~av~nldeI~~~-sDgImIaRGD 339 (575)
..+.+.++++.|+|.|.+.+.. ..+.++++++.. + ...|++ -+-+.+... ...+. +|+|.++-|-
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~---p--~~pvi~g~~~t~e~a~---~l~~~G~d~I~v~~~~ 309 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADY---P--DLPVVAGNVATPEGTE---ALIKAGADAVKVGVGP 309 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHC---T--TSCEEEEEECSHHHHH---HHHHTTCSEEEECSSC
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHC---C--CceEEeCCcCCHHHHH---HHHHcCCCEEEEcCCC
Confidence 3577888999999999986542 223333333332 1 244443 355555443 33334 8999995432
Q ss_pred CCC-------CCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 340 LGV-------DIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 340 Lg~-------e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
=+. ..+.+. ......+.+.++..+.|||.+.-+- .-.|+..++..|||++++.
T Consensus 310 G~~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipvia~GGI~------------~~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 310 GSICTTRVVAGVGVPQ-LTAVMECSEVARKYDVPIIADGGIR------------YSGDIVKALAAGAESVMVG 369 (494)
T ss_dssp STTCHHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred CccccccccCCCCccH-HHHHHHHHHHHhhcCCCEEEECCcC------------CHHHHHHHHHcCCCEEEEC
Confidence 010 011222 2333455566666799999875443 3468899999999999985
No 68
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=85.37 E-value=5.7 Score=39.04 Aligned_cols=134 Identities=12% Similarity=0.086 Sum_probs=83.6
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhcc---------CCCCceEEeeecCHHHHhcHHHHHhcCCEEEE---
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGK---------SSRSIKVLAKIENLESLQKFEEIVEASDGIMV--- 335 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~---------~~~~i~IIaKIEt~~av~nldeI~~~sDgImI--- 335 (575)
...++.+.+.|+|+|.+..-.+ +++.++.+.+++. | ..+.+...-+|+ ++.++++++.+|.|++
T Consensus 82 ~~~i~~~~~aGAd~itvH~ea~-~~~~~~i~~i~~~~~~~~~~~~g-~~~gv~l~p~Tp--~~~l~~~l~~~D~vlvMsv 157 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQLEQY-HDFALTIEWLAKQKTTYANQVYP-VLIGACLCPETP--ISELEPYLDQIDVIQLLTL 157 (237)
T ss_dssp HHHHHHHHHTTCSEEEEETTCT-TSHHHHHHHHTTCEEEETTEEEE-CEEEEEECTTSC--GGGGTTTTTTCSEEEEESE
T ss_pred HHHHHHHHHcCCCEEEEecCCc-ccHHHHHHHHHhcccccccccCC-ceEEEEEeCCCh--HHHHHHHhhcCceeeeeee
Confidence 4567888999999998876655 5677777777665 4 334444444554 6778888888999987
Q ss_pred eCCCCCCCCCCCChHHHHHHHHHHHHHc-----CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHH--cccceEEeccCc
Q 008172 336 ARGDLGVDIPLEQIPTVQEIIIHVCRQL-----NKPVIVASQLLESMVEYPTPTRAEVADVSEAVR--QYADALMLSGES 408 (575)
Q Consensus 336 aRGDLg~e~~~e~v~~~Qk~Ii~~c~~~-----gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~--~G~D~vmLs~ET 408 (575)
.+|==|. ...+...++|-+.+... +.|+.+..-+ +. ..+..++. .|+|++....--
T Consensus 158 ~pgfggq----~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI----------~~---~~~~~~~~~~aGad~~VvGSaI 220 (237)
T 3cu2_A 158 DPRNGTK----YPSELILDRVIQVEKRLGNRRVEKLINIDGSM----------TL---ELAKYFKQGTHQIDWLVSGSAL 220 (237)
T ss_dssp ETTTTEE----CCHHHHHHHHHHHHHHHGGGGGGCEEEEESSC----------CH---HHHHHHHHSSSCCCCEEECGGG
T ss_pred ccCcCCe----ecChhHHHHHHHHHHHHHhcCCCceEEEECCc----------CH---HHHHHHHHhCCCCcEEEEeeHH
Confidence 5542222 23444444443333332 5677664321 11 23355677 899999987443
Q ss_pred CCCCCHHHHHHHHHH
Q 008172 409 AIGPFGQKAVSVLQM 423 (575)
Q Consensus 409 a~G~yPveaV~~m~~ 423 (575)
... .|.++++.+++
T Consensus 221 f~~-d~~~~~~~l~~ 234 (237)
T 3cu2_A 221 FSG-ELKTNLKVWKS 234 (237)
T ss_dssp GSS-CHHHHHHHHHH
T ss_pred hCC-CHHHHHHHHHH
Confidence 333 68888887764
No 69
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=85.27 E-value=5.4 Score=39.14 Aligned_cols=45 Identities=9% Similarity=-0.014 Sum_probs=35.4
Q ss_pred HHHHHHHHHcCCcEE--EeeCCCCCHHHHHHHHHHHHHHhhhcCCce
Q 008172 104 MEDLEKLAMGGMNVA--RLNMCHNTREWHLDVIRKIKQLNHEKLFCI 148 (575)
Q Consensus 104 ~e~l~~li~~G~~v~--RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i 148 (575)
.+.+++.+++|++.. .+|....+.++..+.++.+.++.++.|.|+
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~v 148 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPL 148 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCE
Confidence 678899999999999 999888877777777777777766655543
No 70
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=85.02 E-value=5.3 Score=41.15 Aligned_cols=159 Identities=9% Similarity=0.038 Sum_probs=97.5
Q ss_pred CCCccCHHHHHH-HH-HcCCCEEEe-cCcCChhhHHHHHHHHhc---c-CCCCceEEeeecCHHHHhcHHHHHhc-CCEE
Q 008172 262 TLSKKDWDDIEF-GI-AEGVDFIAM-SFVCDADSVRHLKKYVSG---K-SSRSIKVLAKIENLESLQKFEEIVEA-SDGI 333 (575)
Q Consensus 262 ~lsekD~~di~~-al-~~gvd~I~~-SfV~sa~dv~~ir~~l~~---~-~~~~i~IIaKIEt~~av~nldeI~~~-sDgI 333 (575)
.++..|+..|-. .+ +.|+|.|=+ +|+.++++.+.+++..+. . ..+++.+.+-.=+.. .++..++. .|.|
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~---~i~~a~~~g~~~v 113 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK---TVDWIKDSGAKVL 113 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH---HHHHHHHHTCCEE
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh---hHHHHHHCCCCEE
Confidence 467677655543 54 589999988 677788666666654431 0 113456666555544 45555544 5665
Q ss_pred EEe--CCCC----CCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEecc
Q 008172 334 MVA--RGDL----GVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLSG 406 (575)
Q Consensus 334 mIa--RGDL----g~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs~ 406 (575)
-|- --|+ -+....++.....+.+++.++++|+.|.+.... +-+.++-+...+.+++. +...|+|.+.|.
T Consensus 114 ~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~- 189 (337)
T 3ble_A 114 NLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED---WSNGFRNSPDYVKSLVEHLSKEHIERIFLP- 189 (337)
T ss_dssp EEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET---HHHHHHHCHHHHHHHHHHHHTSCCSEEEEE-
T ss_pred EEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE---CCCCCcCCHHHHHHHHHHHHHcCCCEEEEe-
Confidence 442 2221 011223445566678899999999998875322 11112234455566666 566799999997
Q ss_pred CcCCCCCHHHHHHHHHHHHHH
Q 008172 407 ESAIGPFGQKAVSVLQMASSR 427 (575)
Q Consensus 407 ETa~G~yPveaV~~m~~I~~~ 427 (575)
+|.=.-.|-++-++++.+.++
T Consensus 190 DT~G~~~P~~v~~lv~~l~~~ 210 (337)
T 3ble_A 190 DTLGVLSPEETFQGVDSLIQK 210 (337)
T ss_dssp CTTCCCCHHHHHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHHHHHHHHh
Confidence 788788899888877766543
No 71
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=85.00 E-value=12 Score=37.28 Aligned_cols=130 Identities=17% Similarity=0.106 Sum_probs=79.6
Q ss_pred HHHHHHHHHcCCCEEEec-CcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCC-C
Q 008172 268 WDDIEFGIAEGVDFIAMS-FVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVD-I 344 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~S-fV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e-~ 344 (575)
...+..+...|+|+|.+. -.-+.+++.++.+...+.| +.+++-+-|.+-++. .++. +|.|-+..-||... .
T Consensus 125 ~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lG---l~~lvev~t~ee~~~---A~~~Gad~IGv~~r~l~~~~~ 198 (272)
T 3qja_A 125 PYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLG---MTALVEVHTEQEADR---ALKAGAKVIGVNARDLMTLDV 198 (272)
T ss_dssp HHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTT---CEEEEEESSHHHHHH---HHHHTCSEEEEESBCTTTCCB
T ss_pred HHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCC---CcEEEEcCCHHHHHH---HHHCCCCEEEECCCccccccc
Confidence 345678899999999882 2334677888888777665 446666656544433 2333 89999997776432 2
Q ss_pred CCCChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHH
Q 008172 345 PLEQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQ 422 (575)
Q Consensus 345 ~~e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~ 422 (575)
+++.+ +++ +... +.|++... ..-|.+ |+......|+|++....---....|-++++.+.
T Consensus 199 dl~~~----~~l---~~~v~~~~pvVaeg---------GI~t~e---dv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~ 259 (272)
T 3qja_A 199 DRDCF----ARI---APGLPSSVIRIAES---------GVRGTA---DLLAYAGAGADAVLVGEGLVTSGDPRAAVADLV 259 (272)
T ss_dssp CTTHH----HHH---GGGSCTTSEEEEES---------CCCSHH---HHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHH
T ss_pred CHHHH----HHH---HHhCcccCEEEEEC---------CCCCHH---HHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHH
Confidence 22221 222 2233 67887642 333444 556667789999998644334456777766543
No 72
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=84.82 E-value=2.3 Score=45.02 Aligned_cols=98 Identities=16% Similarity=0.279 Sum_probs=71.6
Q ss_pred HHHHHHHHcCCCEEEecCcCChhhHHHHHHH---HhccCCCCceEEeeecC--HHHHhcHHHHHhcCCEEEEeCCCCCCC
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDADSVRHLKKY---VSGKSSRSIKVLAKIEN--LESLQKFEEIVEASDGIMVARGDLGVD 343 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa~dv~~ir~~---l~~~~~~~i~IIaKIEt--~~av~nldeI~~~sDgImIaRGDLg~e 343 (575)
+.|....+.|+|.|=++ |.+.++++.++++ |...+ -++.++|-|=- +-++..+++..+..|.+=|.||.+|-.
T Consensus 42 ~QI~~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~~~-~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~~ 119 (406)
T 4g9p_A 42 AQVLELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLAEG-VEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRG 119 (406)
T ss_dssp HHHHHHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHHTT-CCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCST
T ss_pred HHHHHHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHhcC-CCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCcc
Confidence 34456668899998777 6777777666554 44454 57889998843 557888888999999999999988631
Q ss_pred CCCCChHHHHHHHHHHHHHcCCCEEEeh
Q 008172 344 IPLEQIPTVQEIIIHVCRQLNKPVIVAS 371 (575)
Q Consensus 344 ~~~e~v~~~Qk~Ii~~c~~~gKPvivaT 371 (575)
.+-..--+.++++|+++|+|+=+-+
T Consensus 120 ---~k~~e~~~~vv~~ak~~~~pIRIGV 144 (406)
T 4g9p_A 120 ---RHKDEHFAEMIRIAMDLGKPVRIGA 144 (406)
T ss_dssp ---HHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ---ccHHHHHHHHHHHHHHccCCceecc
Confidence 1223344689999999999986544
No 73
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=84.57 E-value=13 Score=35.28 Aligned_cols=131 Identities=9% Similarity=0.037 Sum_probs=72.3
Q ss_pred HHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCCCCCCChHH
Q 008172 272 EFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPT 351 (575)
Q Consensus 272 ~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e~~~e~v~~ 351 (575)
..+.+.|+|+|-+..- ...++.+++... ...+..-+.+.+-+.. ....-+|.|+++..--+...+-. .+.
T Consensus 82 ~~a~~~gad~v~l~~~--~~~~~~~~~~~~-----~~~ig~sv~t~~~~~~--a~~~gaD~i~~~~~f~~~~~~g~-~~~ 151 (221)
T 1yad_A 82 DIALFSTIHRVQLPSG--SFSPKQIRARFP-----HLHIGRSVHSLEEAVQ--AEKEDADYVLFGHVFETDCKKGL-EGR 151 (221)
T ss_dssp HHHHTTTCCEEEECTT--SCCHHHHHHHCT-----TCEEEEEECSHHHHHH--HHHTTCSEEEEECCC-----------C
T ss_pred HHHHHcCCCEEEeCCC--ccCHHHHHHHCC-----CCEEEEEcCCHHHHHH--HHhCCCCEEEECCccccCCCCCC-CCC
Confidence 5678899999988753 234566665442 2345555555443221 12233899999863111111100 011
Q ss_pred HHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHH
Q 008172 352 VQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMAS 425 (575)
Q Consensus 352 ~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~ 425 (575)
-.+.+-+.+...+.|++.+.-+ +. .++..++..|+|++.+++--...+.|.++++.+.+.+
T Consensus 152 ~~~~l~~~~~~~~~pvia~GGI----------~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~ 212 (221)
T 1yad_A 152 GVSLLSDIKQRISIPVIAIGGM----------TP---DRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKL 212 (221)
T ss_dssp HHHHHHHHHHHCCSCEEEESSC----------CG---GGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEECCC----------CH---HHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHH
Confidence 1123333344558999986532 33 3556677789999999765444456777777665543
No 74
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=84.38 E-value=18 Score=37.06 Aligned_cols=157 Identities=12% Similarity=0.054 Sum_probs=98.0
Q ss_pred CCCccCHHHHHH-HHHcCCCEEEec-CcCChhhHHHHHHHHhccCCCCceEEeee-cCHHHHhcHHHHHhc--CCE--EE
Q 008172 262 TLSKKDWDDIEF-GIAEGVDFIAMS-FVCDADSVRHLKKYVSGKSSRSIKVLAKI-ENLESLQKFEEIVEA--SDG--IM 334 (575)
Q Consensus 262 ~lsekD~~di~~-al~~gvd~I~~S-fV~sa~dv~~ir~~l~~~~~~~i~IIaKI-Et~~av~nldeI~~~--sDg--Im 334 (575)
.+|..|+..|-. ..+.|++.|=+. ++.++.|.+.++.+.+.. +++.+.+-. =+.++++..-+-+.- .|. ++
T Consensus 24 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~--~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~ 101 (325)
T 3eeg_A 24 QLNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKAV--TRPTICALTRAKEADINIAGEALRFAKRSRIHTG 101 (325)
T ss_dssp -CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHHC--CSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHhC--CCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEE
Confidence 456667655544 456899999775 456888887777765532 345554443 244555432222221 343 45
Q ss_pred EeCCCCC----CCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHH-HcccceEEeccCcC
Q 008172 335 VARGDLG----VDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAV-RQYADALMLSGESA 409 (575)
Q Consensus 335 IaRGDLg----~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav-~~G~D~vmLs~ETa 409 (575)
++=-|+- +....++.....+.+++.|+++|+.|.+..+ ...+-+...+.+++.++ ..|+|.+.|. +|.
T Consensus 102 ~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l~-DT~ 174 (325)
T 3eeg_A 102 IGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE------DAGRADQAFLARMVEAVIEAGADVVNIP-DTT 174 (325)
T ss_dssp EECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE------TGGGSCHHHHHHHHHHHHHHTCSEEECC-BSS
T ss_pred ecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcc------ccccchHHHHHHHHHHHHhcCCCEEEec-Ccc
Confidence 5545542 2344566667778899999999999876433 12234455567777754 4599999997 888
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 008172 410 IGPFGQKAVSVLQMASSR 427 (575)
Q Consensus 410 ~G~yPveaV~~m~~I~~~ 427 (575)
=.-.|-++-+++..+.++
T Consensus 175 G~~~P~~v~~lv~~l~~~ 192 (325)
T 3eeg_A 175 GYMLPWQYGERIKYLMDN 192 (325)
T ss_dssp SCCCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHh
Confidence 888998887777766443
No 75
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=84.35 E-value=8.1 Score=40.53 Aligned_cols=121 Identities=20% Similarity=0.276 Sum_probs=71.2
Q ss_pred cCHHHHHHHHHcCCCEEEe--cCcCChhhHHHHHHHHhccCCCCceEEe-eecCHHHHhcHHHHHhc-CCEEEEeCCCCC
Q 008172 266 KDWDDIEFGIAEGVDFIAM--SFVCDADSVRHLKKYVSGKSSRSIKVLA-KIENLESLQKFEEIVEA-SDGIMVARGDLG 341 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~--SfV~sa~dv~~ir~~l~~~~~~~i~IIa-KIEt~~av~nldeI~~~-sDgImIaRGDLg 341 (575)
.+.+.++.+++.|+|+|.+ ++ .+++.+.++-+.+.+.- ..+.|++ .+-+.+-. ....+. +|+|.++-+ -|
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~-g~~~~~~e~i~~ir~~~-~~~pviv~~v~~~~~a---~~a~~~Gad~I~vg~~-~G 226 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAH-GHSTRIIELIKKIKTKY-PNLDLIAGNIVTKEAA---LDLISVGADCLKVGIG-PG 226 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSC-CSSHHHHHHHHHHHHHC-TTCEEEEEEECSHHHH---HHHHTTTCSEEEECSS-CS
T ss_pred hHHHHHHHHHHCCCCEEEEeCCC-CChHHHHHHHHHHHHHC-CCCeEEEcCCCcHHHH---HHHHhcCCCEEEECCC-CC
Confidence 3466777888999999987 44 23344444444444331 1456665 56665433 333344 899999421 11
Q ss_pred C--------CCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 342 V--------DIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 342 ~--------e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
. ..+.+. ......+.+.+...+.|||.+.-+- .-.|+..++..|+|++++.
T Consensus 227 ~~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipVia~GGI~------------~~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 227 SICTTRIVAGVGVPQ-ITAICDVYEACNNTNICIIADGGIR------------FSGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp TTSHHHHHHCCCCCH-HHHHHHHHHHHTTSSCEEEEESCCC------------SHHHHHHHHHHTCSEEEEC
T ss_pred cCcCccccCCCCcch-HHHHHHHHHHHhhcCceEEEECCCC------------CHHHHHHHHHcCCCHHhhC
Confidence 1 012222 2233445455555689999765433 3467889999999999994
No 76
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=84.24 E-value=10 Score=38.58 Aligned_cols=159 Identities=11% Similarity=0.052 Sum_probs=95.3
Q ss_pred CCCCccCHHHHHHH-HHcCCCEEEecC-cCC-----hhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCE
Q 008172 261 PTLSKKDWDDIEFG-IAEGVDFIAMSF-VCD-----ADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDG 332 (575)
Q Consensus 261 p~lsekD~~di~~a-l~~gvd~I~~Sf-V~s-----a~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDg 332 (575)
..++..|+..|-.. .+.|+|.|=+.| +.+ ..|..++.+.+.+. +++.+.+-..+..+ ++..++. .|.
T Consensus 23 ~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~--~~~~~~~l~~~~~~---i~~a~~~g~~~ 97 (307)
T 1ydo_A 23 VWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE--KGVTYAALVPNQRG---LENALEGGINE 97 (307)
T ss_dssp SCCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC--TTCEEEEECCSHHH---HHHHHHHTCSE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhc--CCCeEEEEeCCHHh---HHHHHhCCcCE
Confidence 35677777665555 468999998854 332 14555555555433 34555555555544 4444444 676
Q ss_pred EEEe--CCCC----CCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEec
Q 008172 333 IMVA--RGDL----GVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLS 405 (575)
Q Consensus 333 ImIa--RGDL----g~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs 405 (575)
|.|- --|+ -+....++.....+.+++.++++|+.|-+.--+--+-....+-+...+.+++. +...|+|.+.|.
T Consensus 98 v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~ 177 (307)
T 1ydo_A 98 ACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLG 177 (307)
T ss_dssp EEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEE
T ss_pred EEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEc
Confidence 6553 2222 11223345556667899999999999853210100001112345566677666 567899999998
Q ss_pred cCcCCCCCHHHHHHHHHHHH
Q 008172 406 GESAIGPFGQKAVSVLQMAS 425 (575)
Q Consensus 406 ~ETa~G~yPveaV~~m~~I~ 425 (575)
+|.=.-.|-+.-++++.+.
T Consensus 178 -DT~G~~~P~~v~~lv~~l~ 196 (307)
T 1ydo_A 178 -DTIGAANPAQVETVLEALL 196 (307)
T ss_dssp -CSSCCCCHHHHHHHHHHHH
T ss_pred -CCCCCcCHHHHHHHHHHHH
Confidence 8887889988888777664
No 77
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=84.18 E-value=5.7 Score=38.16 Aligned_cols=130 Identities=15% Similarity=0.141 Sum_probs=75.8
Q ss_pred HHHHHHHHHcCCCEEEec-----CcCC----hhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeC
Q 008172 268 WDDIEFGIAEGVDFIAMS-----FVCD----ADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~S-----fV~s----a~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaR 337 (575)
.++++.+.+.|+|+|-+= |+.. .+.++++|+.+. ....+=.++.+++ +.++..++. +|++.+--
T Consensus 22 ~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~----~~~~v~lmv~d~~--~~i~~~~~agad~v~vH~ 95 (228)
T 1h1y_A 22 AAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTK----AYLDCHLMVTNPS--DYVEPLAKAGASGFTFHI 95 (228)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCC----SEEEEEEESSCGG--GGHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcC----CcEEEEEEecCHH--HHHHHHHHcCCCEEEECC
Confidence 355677888999997655 7766 566666665441 1234446777763 347777777 89998752
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHc---ccceEEecc-C-c-CCC
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQ---YADALMLSG-E-S-AIG 411 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~---G~D~vmLs~-E-T-a~G 411 (575)
+. .+. ...+.++.+++.|+.++++. +|. |..|. ...+.. ++|.+++.. + + .--
T Consensus 96 ~~------~~~---~~~~~~~~i~~~g~~igv~~--------~p~-t~~e~---~~~~~~~~~~~d~vl~~sv~pg~~g~ 154 (228)
T 1h1y_A 96 EV------SRD---NWQELIQSIKAKGMRPGVSL--------RPG-TPVEE---VFPLVEAENPVELVLVMTVEPGFGGQ 154 (228)
T ss_dssp GG------CTT---THHHHHHHHHHTTCEEEEEE--------CTT-SCGGG---GHHHHHSSSCCSEEEEESSCTTCSSC
T ss_pred CC------ccc---HHHHHHHHHHHcCCCEEEEE--------eCC-CCHHH---HHHHHhcCCCCCEEEEEeecCCCCcc
Confidence 11 111 11466778888999999864 121 11121 234456 999998832 1 1 112
Q ss_pred CCHHHHHHHHHHH
Q 008172 412 PFGQKAVSVLQMA 424 (575)
Q Consensus 412 ~yPveaV~~m~~I 424 (575)
+|+...++.++++
T Consensus 155 ~~~~~~l~~i~~~ 167 (228)
T 1h1y_A 155 KFMPEMMEKVRAL 167 (228)
T ss_dssp CCCGGGHHHHHHH
T ss_pred cCCHHHHHHHHHH
Confidence 4554444444443
No 78
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=84.17 E-value=11 Score=37.40 Aligned_cols=127 Identities=11% Similarity=0.181 Sum_probs=85.9
Q ss_pred HHHHHHHHHcCCCEEEecCcC--C---------hhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEe
Q 008172 268 WDDIEFGIAEGVDFIAMSFVC--D---------ADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVA 336 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~--s---------a~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIa 336 (575)
.+.++.+.+.|+|+|....-. + .+..+.+++++.+.| +.+++-+-+.+.++-+.+. +|.+-||
T Consensus 40 ~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~G---l~~~te~~d~~~~~~l~~~---vd~~kIg 113 (262)
T 1zco_A 40 MKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYG---LVTVTEVMDTRHVELVAKY---SDILQIG 113 (262)
T ss_dssp HHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT---CEEEEECCCGGGHHHHHHH---CSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcC---CcEEEeeCCHHhHHHHHhh---CCEEEEC
Confidence 455667788999998776432 1 778889999998776 7899999888887666654 7999999
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHH-cccceEEec--cCcCCCCC
Q 008172 337 RGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVR-QYADALMLS--GESAIGPF 413 (575)
Q Consensus 337 RGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~-~G~D~vmLs--~ETa~G~y 413 (575)
.+++ +.. .+++++-+.||||++.|.| .+|-.|+.+.+..+. .|.+-++|- |=+..-.|
T Consensus 114 a~~~------~n~-----~ll~~~a~~~kPV~lk~G~--------~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y 174 (262)
T 1zco_A 114 ARNS------QNF-----ELLKEVGKVENPVLLKRGM--------GNTIQELLYSAEYIMAQGNENVILCERGIRTFETA 174 (262)
T ss_dssp GGGT------TCH-----HHHHHHTTSSSCEEEECCT--------TCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCS
T ss_pred cccc------cCH-----HHHHHHHhcCCcEEEecCC--------CCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCc
Confidence 7765 232 2344455589999996543 267788877777554 455444443 21233367
Q ss_pred HHHHHH
Q 008172 414 GQKAVS 419 (575)
Q Consensus 414 PveaV~ 419 (575)
|.+.+.
T Consensus 175 ~~~~v~ 180 (262)
T 1zco_A 175 TRFTLD 180 (262)
T ss_dssp SSSBCC
T ss_pred ChhhcC
Confidence 765443
No 79
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=84.03 E-value=9.1 Score=41.50 Aligned_cols=119 Identities=13% Similarity=0.117 Sum_probs=73.9
Q ss_pred HHHHHHHHHcCCCEEEecCc--CC---hhhHHHHHHHHhccCCC-CceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFV--CD---ADSVRHLKKYVSGKSSR-SIKVLAKIENLESLQKFEEIVEASDGIMVARGDLG 341 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV--~s---a~dv~~ir~~l~~~~~~-~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg 341 (575)
.+.++...+.|++.+.+..- .+ .+.++.+++... + -..++..+.+.+..+.+.+ .-+|++.++.|-=+
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~~----~~~~Vi~G~V~t~~~a~~l~~--aGad~I~Vg~~~g~ 317 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYG----DKVKVGAGNIVDGEGFRYLAD--AGADFIKIGIGGGS 317 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHHG----GGSCEEEEEECSHHHHHHHHH--HTCSEEEECSSCST
T ss_pred HHHHHHHHhhhccceEEecccCcccchhhHHHHHHHhCC----CCceEeeccccCHHHHHHHHH--hCCCeEEecccCCc
Confidence 45567778889999877321 12 223333333221 1 2344567888877765443 23899998764311
Q ss_pred C-------CCCCCChHHHHHHHHHHHHHc------CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 342 V-------DIPLEQIPTVQEIIIHVCRQL------NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 342 ~-------e~~~e~v~~~Qk~Ii~~c~~~------gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
. ..+.+ -..+...+.++|++. +.|||.+.-+. --.|++.|+..|||+||+.
T Consensus 318 ~~~~r~~~~~g~p-~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~------------~~~di~kAlalGA~~V~iG 381 (503)
T 1me8_A 318 ICITREQKGIGRG-QATAVIDVVAERNKYFEETGIYIPVCSDGGIV------------YDYHMTLALAMGADFIMLG 381 (503)
T ss_dssp TCCSTTTTCCCCC-HHHHHHHHHHHHHHHHHHHSEECCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred CcccccccCCCCc-hHHHHHHHHHHHHHHhhhcCCCceEEEeCCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 1 11223 233445677777777 89999876544 3468899999999999996
No 80
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=83.97 E-value=8.9 Score=38.66 Aligned_cols=158 Identities=13% Similarity=0.057 Sum_probs=94.3
Q ss_pred CCCccCHHHHH-HHHHcCCCEEEecC-cCC-----hhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEE
Q 008172 262 TLSKKDWDDIE-FGIAEGVDFIAMSF-VCD-----ADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGI 333 (575)
Q Consensus 262 ~lsekD~~di~-~al~~gvd~I~~Sf-V~s-----a~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgI 333 (575)
.++..++..|- .+.+.|++.|-+.| +.. ..|..++.+.+.+. .++.+.+-..+.+. ++.-++. .|.|
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~~~~~~---i~~a~~aG~~~v 100 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQR--PGVTYAALAPNLKG---FEAALESGVKEV 100 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC--TTSEEEEECCSHHH---HHHHHHTTCCEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhc--CCCEEEEEeCCHHH---HHHHHhCCcCEE
Confidence 45667765554 45569999998864 322 14555554445433 35566555545443 3334444 7888
Q ss_pred EEe-CC-CC----CCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEecc
Q 008172 334 MVA-RG-DL----GVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLSG 406 (575)
Q Consensus 334 mIa-RG-DL----g~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs~ 406 (575)
+|. .. |+ -+.++.++.....+++++.|+++|+.|-..--+.-+-....+-+..++.+++. +...|+|.+.|.
T Consensus 101 ~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~- 179 (302)
T 2ftp_A 101 AVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLG- 179 (302)
T ss_dssp EEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE-
T ss_pred EEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe-
Confidence 872 22 21 11245566777778999999999999842100000000111334556666665 457899999999
Q ss_pred CcCCCCCHHHHHHHHHHHH
Q 008172 407 ESAIGPFGQKAVSVLQMAS 425 (575)
Q Consensus 407 ETa~G~yPveaV~~m~~I~ 425 (575)
+|.=...|-+.-+.++.+.
T Consensus 180 DT~G~~~P~~~~~lv~~l~ 198 (302)
T 2ftp_A 180 DTIGVGTAGATRRLIEAVA 198 (302)
T ss_dssp ESSSCCCHHHHHHHHHHHT
T ss_pred CCCCCcCHHHHHHHHHHHH
Confidence 6666678988877777664
No 81
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=83.60 E-value=2 Score=44.25 Aligned_cols=118 Identities=19% Similarity=0.304 Sum_probs=67.3
Q ss_pred ccCHHHHHHHHHcC--CCEEEecCcC-C----hhhHHHHHHHHhccCCCCceEEee-ecCHHHHhcHHHHHhc-CCEEEE
Q 008172 265 KKDWDDIEFGIAEG--VDFIAMSFVC-D----ADSVRHLKKYVSGKSSRSIKVLAK-IENLESLQKFEEIVEA-SDGIMV 335 (575)
Q Consensus 265 ekD~~di~~al~~g--vd~I~~SfV~-s----a~dv~~ir~~l~~~~~~~i~IIaK-IEt~~av~nldeI~~~-sDgImI 335 (575)
+.+.+.++...+.| +|+|.+.+-. . .+.++++++.. +.+.++.. +-+.+ ......+. +|+|.+
T Consensus 105 ~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~-----~~~~vi~G~v~s~e---~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 105 EDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHL-----PESFVIAGNVGTPE---AVRELENAGADATKV 176 (336)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHC-----TTSEEEEEEECSHH---HHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhC-----CCCEEEECCcCCHH---HHHHHHHcCCCEEEE
Confidence 34556677788888 9998764321 2 23344444322 23556655 65543 34444445 999999
Q ss_pred eC--CC-------CCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEecc
Q 008172 336 AR--GD-------LGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 336 aR--GD-------Lg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ 406 (575)
+- |= .+...| .. ....+.+.+...+.|||.+.-+- --.|+..|+..|||+||+..
T Consensus 177 s~hgG~~~~~~~~~~~g~~--g~--~~~~l~~v~~~~~ipVIa~GGI~------------~g~Dv~kalalGAdaV~iGr 240 (336)
T 1ypf_A 177 GIGPGKVCITKIKTGFGTG--GW--QLAALRWCAKAASKPIIADGGIR------------TNGDVAKSIRFGATMVMIGS 240 (336)
T ss_dssp CSSCSTTCHHHHHHSCSST--TC--HHHHHHHHHHTCSSCEEEESCCC------------STHHHHHHHHTTCSEEEESG
T ss_pred ecCCCceeecccccCcCCc--hh--HHHHHHHHHHHcCCcEEEeCCCC------------CHHHHHHHHHcCCCEEEeCh
Confidence 31 10 111111 00 12233344445589999865443 34688999999999999953
No 82
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=83.59 E-value=5.5 Score=39.84 Aligned_cols=118 Identities=14% Similarity=0.163 Sum_probs=72.3
Q ss_pred HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEe---CCCCCCCCC
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVA---RGDLGVDIP 345 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIa---RGDLg~e~~ 345 (575)
+.++.+.+.|+|+++++-.- .++..++++.+++.|.+.+.+++- . ...+.+..|++.++|.+-. .|=-|..
T Consensus 114 ~f~~~~~~aGvdgvii~Dlp-~ee~~~~~~~~~~~gl~~i~liaP-~--t~~eri~~i~~~~~gfvY~vS~~GvTG~~-- 187 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIADVP-VEESAPFSKAAKAHGIAPIFIAPP-N--ADADTLKMVSEQGEGYTYLLSRAGVTGTE-- 187 (267)
T ss_dssp HHHHHHHHHTCCEEEETTSC-GGGCHHHHHHHHHTTCEEECEECT-T--CCHHHHHHHHHHCCSCEEESCCCCCC-----
T ss_pred HHHHHHHHcCCCEEEeCCCC-HhhHHHHHHHHHHcCCeEEEEECC-C--CCHHHHHHHHHhCCCcEEEEecCCCCCCc--
Confidence 45567789999999998764 467888899898877333334422 1 2357899999998755433 1212222
Q ss_pred CCChHHHHHHHHHHHHHc-CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 346 LEQIPTVQEIIIHVCRQL-NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 346 ~e~v~~~Qk~Ii~~c~~~-gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
...+.-....++..+++ ..|+++..- .-|.+ ++..++..|+|++...
T Consensus 188 -~~~~~~~~~~v~~vr~~~~~pv~vGfG---------I~~~e---~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 188 -SKAGEPIENILTQLAEFNAPPPLLGFG---------IAEPE---QVRAAIKAGAAGAISG 235 (267)
T ss_dssp ------CHHHHHHHHHTTTCCCEEECSS---------CCSHH---HHHHHHHTTCSEEEEC
T ss_pred -cCCcHHHHHHHHHHHHhcCCCEEEECC---------cCCHH---HHHHHHHcCCCEEEEC
Confidence 11233344556666664 679998532 32333 4455788999999985
No 83
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=83.58 E-value=7.8 Score=37.30 Aligned_cols=133 Identities=17% Similarity=0.179 Sum_probs=73.5
Q ss_pred CHHHHHHHHHcCCCEEEecC--cCChhhHHHHHHHHhccCCCCceEE--e-------eecC--------HHHHhcHHHHH
Q 008172 267 DWDDIEFGIAEGVDFIAMSF--VCDADSVRHLKKYVSGKSSRSIKVL--A-------KIEN--------LESLQKFEEIV 327 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~Sf--V~sa~dv~~ir~~l~~~~~~~i~II--a-------KIEt--------~~av~nldeI~ 327 (575)
+.++++.+++.|+|+|.+.- ..+++.+.++.+.+.. +.+.+- + +++. ....+.+.++.
T Consensus 86 ~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~~~---~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~ 162 (252)
T 1ka9_F 86 SLEDARKLLLSGADKVSVNSAAVRRPELIRELADHFGA---QAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGV 162 (252)
T ss_dssp SHHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHHCG---GGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHcCC---CcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHH
Confidence 46788889999999998864 5666667777665531 111111 1 1111 12344455666
Q ss_pred hc-CCEEEEeC-CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 328 EA-SDGIMVAR-GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 328 ~~-sDgImIaR-GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
+. +++|++.. +-=|...+. ++ ..+-+.+...+.|++... ..-+.+ |+......|+|++|..
T Consensus 163 ~~G~~~i~~~~~~~~g~~~g~-~~----~~i~~l~~~~~ipvia~G---------GI~~~~---d~~~~~~~Gadgv~vg 225 (252)
T 1ka9_F 163 ELGAGEILLTSMDRDGTKEGY-DL----RLTRMVAEAVGVPVIASG---------GAGRME---HFLEAFQAGAEAALAA 225 (252)
T ss_dssp HHTCCEEEEEETTTTTTCSCC-CH----HHHHHHHHHCSSCEEEES---------CCCSHH---HHHHHHHTTCSEEEES
T ss_pred HcCCCEEEEecccCCCCcCCC-CH----HHHHHHHHHcCCCEEEeC---------CCCCHH---HHHHHHHCCCHHHHHH
Confidence 66 89998852 210122222 22 222233445689999753 334444 4455556799999987
Q ss_pred cCcCCCC-CHHHHHH
Q 008172 406 GESAIGP-FGQKAVS 419 (575)
Q Consensus 406 ~ETa~G~-yPveaV~ 419 (575)
.---.+. -|.++.+
T Consensus 226 sal~~~~~~~~~~~~ 240 (252)
T 1ka9_F 226 SVFHFGEIPIPKLKR 240 (252)
T ss_dssp HHHHTTSSCHHHHHH
T ss_pred HHHHcCCCCHHHHHH
Confidence 4444454 3444444
No 84
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=83.56 E-value=0.79 Score=53.29 Aligned_cols=93 Identities=13% Similarity=0.199 Sum_probs=79.4
Q ss_pred CCCEEEecCcCChhhHHHHHHHHhccCCC-CceEEeeecCHHHHhcHHHHHhc---C----------CEEEEeCCCCCCC
Q 008172 278 GVDFIAMSFVCDADSVRHLKKYVSGKSSR-SIKVLAKIENLESLQKFEEIVEA---S----------DGIMVARGDLGVD 343 (575)
Q Consensus 278 gvd~I~~SfV~sa~dv~~ir~~l~~~~~~-~i~IIaKIEt~~av~nldeI~~~---s----------DgImIaRGDLg~e 343 (575)
.+..+++||.++++|+.++--+.++.|.. .+.|+.=.||.+.++|.++|++. . =-||+|..|=+-+
T Consensus 468 a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~KD 547 (883)
T 1jqn_A 468 SIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKD 547 (883)
T ss_dssp SEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHHHH
T ss_pred hcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeecccccc
Confidence 46678999999999999999988887743 58899999999999999999887 1 2599998887777
Q ss_pred CCC----CChHHHHHHHHHHHHHcCCCEEEe
Q 008172 344 IPL----EQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 344 ~~~----e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-|. =.+..+|+++.+.|+++|.++.+-
T Consensus 548 ~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lF 578 (883)
T 1jqn_A 548 AGVMAASWAQYQAQDALIKTCEKAGIELTLF 578 (883)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCeEEEe
Confidence 775 467889999999999999999863
No 85
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=83.39 E-value=6.4 Score=37.62 Aligned_cols=136 Identities=14% Similarity=0.127 Sum_probs=74.6
Q ss_pred HHHHHHHHcCCCEEEecCc--CChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEe---CCCCCCC
Q 008172 269 DDIEFGIAEGVDFIAMSFV--CDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVA---RGDLGVD 343 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV--~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIa---RGDLg~e 343 (575)
..++.+.+.|+|+|.+..- .+ ++..++.+.+.+.| ..++.-+-...-.+.+.++...+|.+++. +|--|..
T Consensus 82 ~~v~~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~~~g---~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~~ 157 (230)
T 1rpx_A 82 QRVPDFIKAGADIVSVHCEQSST-IHLHRTINQIKSLG---AKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQS 157 (230)
T ss_dssp HHHHHHHHTTCSEEEEECSTTTC-SCHHHHHHHHHHTT---SEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSCC
T ss_pred HHHHHHHHcCCCEEEEEecCccc-hhHHHHHHHHHHcC---CcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCcc
Confidence 4677788999999987765 44 44555555565544 23333331112234455556668977443 3433333
Q ss_pred CCCCChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHH
Q 008172 344 IPLEQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVL 421 (575)
Q Consensus 344 ~~~e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m 421 (575)
+.. ....--+++-+.+.+. ..|+++.--+ .| ..+..++..|+|++..++--...+.|.++++.+
T Consensus 158 ~~~-~~~~~i~~l~~~~~~~~~~~pi~v~GGI--------~~-----~n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~l 223 (230)
T 1rpx_A 158 FIE-SQVKKISDLRKICAERGLNPWIEVDGGV--------GP-----KNAYKVIEAGANALVAGSAVFGAPDYAEAIKGI 223 (230)
T ss_dssp CCT-THHHHHHHHHHHHHHHTCCCEEEEESSC--------CT-----TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHH
T ss_pred ccH-HHHHHHHHHHHHHHhcCCCceEEEECCC--------CH-----HHHHHHHHcCCCEEEEChhhhCCCCHHHHHHHH
Confidence 332 2222223333333322 6777764322 23 233555667999999975544455688887765
Q ss_pred H
Q 008172 422 Q 422 (575)
Q Consensus 422 ~ 422 (575)
+
T Consensus 224 ~ 224 (230)
T 1rpx_A 224 K 224 (230)
T ss_dssp H
T ss_pred H
Confidence 4
No 86
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=82.57 E-value=7.1 Score=39.28 Aligned_cols=160 Identities=14% Similarity=0.076 Sum_probs=94.0
Q ss_pred CCCccCHHHH-HHHHHcCCCEEEecC-cCC-----hhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEE
Q 008172 262 TLSKKDWDDI-EFGIAEGVDFIAMSF-VCD-----ADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGI 333 (575)
Q Consensus 262 ~lsekD~~di-~~al~~gvd~I~~Sf-V~s-----a~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgI 333 (575)
.+|..++..| +...+.|+|.|=+.| +.. ..|..++.+.+.+. +.+.+.+-..+.++ ++..++. .|.|
T Consensus 23 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~--~~~~~~~l~~~~~~---i~~a~~ag~~~v 97 (298)
T 2cw6_A 23 IVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKF--PGINYPVLTPNLKG---FEAAVAAGAKEV 97 (298)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCC--TTCBCCEECCSHHH---HHHHHHTTCSEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhC--CCCEEEEEcCCHHh---HHHHHHCCCCEE
Confidence 4666666554 455678999998864 332 14666666666543 23333333345444 4444444 6776
Q ss_pred EEe--CCCC----CCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEecc
Q 008172 334 MVA--RGDL----GVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLSG 406 (575)
Q Consensus 334 mIa--RGDL----g~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs~ 406 (575)
.|- -.|. -+..+.++.....++.++.++++|++|-+..-+-=+-....+-+..++.+++. +...|+|.+.|.
T Consensus 98 ~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~- 176 (298)
T 2cw6_A 98 VIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLG- 176 (298)
T ss_dssp EEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE-
T ss_pred EEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec-
Confidence 653 1111 01123344555667889999999999865321110101111334556666665 567899999998
Q ss_pred CcCCCCCHHHHHHHHHHHHHH
Q 008172 407 ESAIGPFGQKAVSVLQMASSR 427 (575)
Q Consensus 407 ETa~G~yPveaV~~m~~I~~~ 427 (575)
+|.=.-.|.+.-++++.+.+.
T Consensus 177 DT~G~~~P~~~~~lv~~l~~~ 197 (298)
T 2cw6_A 177 DTIGVGTPGIMKDMLSAVMQE 197 (298)
T ss_dssp ETTSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHHHHh
Confidence 777777899988887777543
No 87
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=82.30 E-value=7.8 Score=38.86 Aligned_cols=118 Identities=14% Similarity=0.162 Sum_probs=73.0
Q ss_pred HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEE--eC-CCCCCCCC
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMV--AR-GDLGVDIP 345 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImI--aR-GDLg~e~~ 345 (575)
+.++.+.+.|+|++++|-.-- ++..++++.+++.|.+.+.+++-- ...+.+.+|.+.++|++- .+ |==|..
T Consensus 116 ~f~~~~~~aGvdGvIipDlp~-ee~~~~~~~~~~~gl~~I~lvap~---t~~eri~~i~~~~~gfiY~vs~~GvTG~~-- 189 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLIADVPT-NESQPFVAAAEKFGIQPIFIAPPT---ASDETLRAVAQLGKGYTYLLSRAGVTGAE-- 189 (271)
T ss_dssp HHHHHHHHHTCCEEEETTSCG-GGCHHHHHHHHHTTCEEEEEECTT---CCHHHHHHHHHHCCSCEEECCCC--------
T ss_pred HHHHHHHHCCCCEEEECCCCH-HHHHHHHHHHHHcCCeEEEEECCC---CCHHHHHHHHHHCCCeEEEEeccCCCCcc--
Confidence 445678899999999987644 678888888887763333344221 224688899988766532 22 111111
Q ss_pred CCChHHHHHHHHHHHHHc-CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 346 LEQIPTVQEIIIHVCRQL-NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 346 ~e~v~~~Qk~Ii~~c~~~-gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
..++.-.+..++..+++ ..|+++..- .-|.+ ++..++..|+|++...
T Consensus 190 -~~~~~~~~~~v~~vr~~~~~Pv~vGfG---------Ist~e---~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 190 -TKANMPVHALLERLQQFDAPPALLGFG---------ISEPA---QVKQAIEAGAAGAISG 237 (271)
T ss_dssp ---CCHHHHHHHHHHHHTTCCCEEECSS---------CCSHH---HHHHHHHTTCSEEEES
T ss_pred -cCCchhHHHHHHHHHHhcCCCEEEECC---------CCCHH---HHHHHHHcCCCEEEEC
Confidence 12233345666666765 679998532 33333 4466788999999985
No 88
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=81.60 E-value=4.1 Score=38.90 Aligned_cols=137 Identities=11% Similarity=0.057 Sum_probs=75.1
Q ss_pred HHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceE-EeeecCHHHHhcHHHHHh-cCCEEEEeCCCCCCCCCCC
Q 008172 270 DIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKV-LAKIENLESLQKFEEIVE-ASDGIMVARGDLGVDIPLE 347 (575)
Q Consensus 270 di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~I-IaKIEt~~av~nldeI~~-~sDgImIaRGDLg~e~~~e 347 (575)
.++.+.+.|+|+|.++.....+.++++.+.+++.| ....+ +.-.-|.+ .+.++.+ -.|.+.+-+|-..-.-|..
T Consensus 75 ~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g-~~~~~d~l~~~T~~---~~~~~~~~g~d~v~~~~~~~~~~~g~~ 150 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAAAHIATIAACKKVADELN-GEIQIEIYGNWTMQ---DAKAWVDLGITQAIYHRSRDAELAGIG 150 (218)
T ss_dssp HHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHT-CEEEEECCSSCCHH---HHHHHHHTTCCEEEEECCHHHHHHTCC
T ss_pred HHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhC-CccceeeeecCCHH---HHHHHHHcCccceeeeeccccccCCCc
Confidence 44677899999999987766666788888887765 22222 33334643 3444444 3787766443211000111
Q ss_pred ChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHH
Q 008172 348 QIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMAS 425 (575)
Q Consensus 348 ~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~ 425 (575)
-.+..-++|-+. +..+.|+++.-.+ .|..+ ..++..|+|++...+--.....|.+++ .+++..
T Consensus 151 ~~~~~l~~i~~~-~~~~~pi~v~GGI--------~~~~~-----~~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~~~ 213 (218)
T 3jr2_A 151 WTTDDLDKMRQL-SALGIELSITGGI--------VPEDI-----YLFEGIKTKTFIAGRALAGAEGQQTAA-ALREQI 213 (218)
T ss_dssp SCHHHHHHHHHH-HHTTCEEEEESSC--------CGGGG-----GGGTTSCEEEEEESGGGSHHHHHHHHH-HHHHHH
T ss_pred CCHHHHHHHHHH-hCCCCCEEEECCC--------CHHHH-----HHHHHcCCCEEEEchhhcCCCCHHHHH-HHHHHH
Confidence 122222333222 2346777764221 22222 346788999999874433334577777 555543
No 89
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=81.46 E-value=6.9 Score=39.82 Aligned_cols=116 Identities=16% Similarity=0.186 Sum_probs=61.6
Q ss_pred cCCCEEEecCc-------C---Ch----hhHHHHHHHHhcc----CCCCceEEeeecCHHHHhcHHHHHh----c-CCEE
Q 008172 277 EGVDFIAMSFV-------C---DA----DSVRHLKKYVSGK----SSRSIKVLAKIENLESLQKFEEIVE----A-SDGI 333 (575)
Q Consensus 277 ~gvd~I~~SfV-------~---sa----~dv~~ir~~l~~~----~~~~i~IIaKIEt~~av~nldeI~~----~-sDgI 333 (575)
.|+|+|-+.|- + ++ +.++.+|+..... | ++..|+.||=.--..+++.++++ . +|+|
T Consensus 164 ~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g-~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i 242 (336)
T 1f76_A 164 AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHH-KYVPIAVKIAPDLSEEELIQVADSLVRHNIDGV 242 (336)
T ss_dssp GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHT-SCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEE
T ss_pred ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhccc-ccCceEEEecCCCCHHHHHHHHHHHHHcCCcEE
Confidence 48999877662 1 11 3334444443211 2 35789999732111123333332 2 7999
Q ss_pred EEeCCCCCCC----------CC-C--CChHHHHHHHHHHHHH-c--CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHc
Q 008172 334 MVARGDLGVD----------IP-L--EQIPTVQEIIIHVCRQ-L--NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQ 397 (575)
Q Consensus 334 mIaRGDLg~e----------~~-~--e~v~~~Qk~Ii~~c~~-~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~ 397 (575)
.+.-+-.+.+ .+ + +.+....-..++..++ . +.|||.+..+- ...|+..++..
T Consensus 243 ~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~------------~~~da~~~l~~ 310 (336)
T 1f76_A 243 IATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGID------------SVIAAREKIAA 310 (336)
T ss_dssp EECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCC------------SHHHHHHHHHH
T ss_pred EEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCC------------CHHHHHHHHHC
Confidence 9853211111 10 1 1112233344444444 4 78999865443 34567888889
Q ss_pred ccceEEec
Q 008172 398 YADALMLS 405 (575)
Q Consensus 398 G~D~vmLs 405 (575)
|||+|++.
T Consensus 311 GAd~V~ig 318 (336)
T 1f76_A 311 GASLVQIY 318 (336)
T ss_dssp TCSEEEES
T ss_pred CCCEEEee
Confidence 99999997
No 90
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=81.44 E-value=10 Score=36.82 Aligned_cols=104 Identities=11% Similarity=0.154 Sum_probs=67.4
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVDIPL 346 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e~~~ 346 (575)
.+.++.+++.|++.|=+.+ ++....+.++++..+. .++.+-+-. .---+..+.-++. +|+++.+-.|
T Consensus 32 ~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~--~~l~vgaGt--vl~~d~~~~A~~aGAd~v~~p~~d------- 99 (224)
T 1vhc_A 32 LPLADTLAKNGLSVAEITF-RSEAAADAIRLLRANR--PDFLIAAGT--VLTAEQVVLAKSSGADFVVTPGLN------- 99 (224)
T ss_dssp HHHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC--TTCEEEEES--CCSHHHHHHHHHHTCSEEECSSCC-------
T ss_pred HHHHHHHHHcCCCEEEEec-cCchHHHHHHHHHHhC--cCcEEeeCc--EeeHHHHHHHHHCCCCEEEECCCC-------
Confidence 3556778899999999996 5666666565554443 234443322 1112455555555 8999765322
Q ss_pred CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEe
Q 008172 347 EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALML 404 (575)
Q Consensus 347 e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmL 404 (575)
..+++.|++.|+|++.-+ -| .+++..|...|+|.+.+
T Consensus 100 -------~~v~~~ar~~g~~~i~Gv-----------~t---~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 100 -------PKIVKLCQDLNFPITPGV-----------NN---PMAIEIALEMGISAVKF 136 (224)
T ss_dssp -------HHHHHHHHHTTCCEECEE-----------CS---HHHHHHHHHTTCCEEEE
T ss_pred -------HHHHHHHHHhCCCEEecc-----------CC---HHHHHHHHHCCCCEEEE
Confidence 457789999999998631 22 23347788999999999
No 91
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=81.27 E-value=20 Score=36.73 Aligned_cols=150 Identities=10% Similarity=0.044 Sum_probs=91.8
Q ss_pred CCCccCHHHHHH-HHHcCCCEEEe-----cCcCC-------hhhHHHHHHHHhccCCCCceEEee-ecCHHHHhcHHHHH
Q 008172 262 TLSKKDWDDIEF-GIAEGVDFIAM-----SFVCD-------ADSVRHLKKYVSGKSSRSIKVLAK-IENLESLQKFEEIV 327 (575)
Q Consensus 262 ~lsekD~~di~~-al~~gvd~I~~-----SfV~s-------a~dv~~ir~~l~~~~~~~i~IIaK-IEt~~av~nldeI~ 327 (575)
.++..++..|-. ..+.|+|.|=+ ++..| +.+.+.++.+... . .++.+.+. .=+..-.+.++...
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~-~-~~~~i~~l~~p~~~~~~~i~~a~ 103 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGE-I-SHAQIATLLLPGIGSVHDLKNAY 103 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTT-C-SSSEEEEEECBTTBCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhh-C-CCCEEEEEecCCcccHHHHHHHH
Confidence 466677655544 45689999999 44432 3445555555432 2 45666665 22111133455555
Q ss_pred hc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEec
Q 008172 328 EA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLS 405 (575)
Q Consensus 328 ~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs 405 (575)
+. +|++.|. ++..++ ...+..++.|+++|+.+.+.- ...+.-+.+.+.+++. +...|+|+|.|.
T Consensus 104 ~aGvd~v~I~-------~~~s~~-~~~~~~i~~ak~~G~~v~~~~------~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~ 169 (345)
T 1nvm_A 104 QAGARVVRVA-------THCTEA-DVSKQHIEYARNLGMDTVGFL------MMSHMIPAEKLAEQGKLMESYGATCIYMA 169 (345)
T ss_dssp HHTCCEEEEE-------EETTCG-GGGHHHHHHHHHHTCEEEEEE------ESTTSSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred hCCcCEEEEE-------EeccHH-HHHHHHHHHHHHCCCEEEEEE------EeCCCCCHHHHHHHHHHHHHCCCCEEEEC
Confidence 55 8999885 233332 234678899999999988752 1234455666777777 455679999998
Q ss_pred cCcCCCCCHHHHHHHHHHHHHHH
Q 008172 406 GESAIGPFGQKAVSVLQMASSRM 428 (575)
Q Consensus 406 ~ETa~G~yPveaV~~m~~I~~~a 428 (575)
.=|- ...|-++-+.++.+.+..
T Consensus 170 DT~G-~~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 170 DSGG-AMSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp CTTC-CCCHHHHHHHHHHHHHHS
T ss_pred CCcC-ccCHHHHHHHHHHHHHhc
Confidence 5444 446988877777665443
No 92
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=81.00 E-value=12 Score=36.11 Aligned_cols=135 Identities=13% Similarity=0.104 Sum_probs=71.6
Q ss_pred cCHHHHHHHHHcCCCEEEecC--cCChhhHHHHHHHHhccCCCCc--eEEee-------ecCH--------HHHhcHHHH
Q 008172 266 KDWDDIEFGIAEGVDFIAMSF--VCDADSVRHLKKYVSGKSSRSI--KVLAK-------IENL--------ESLQKFEEI 326 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~Sf--V~sa~dv~~ir~~l~~~~~~~i--~IIaK-------IEt~--------~av~nldeI 326 (575)
.+.++++.+++.|+|+|.+.- ..+++.+.++.+.++. +.+ .+=++ ++.. ..++.+.++
T Consensus 84 ~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~g~---~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~ 160 (253)
T 1thf_D 84 HDFETASELILRGADKVSINTAAVENPSLITQIAQTFGS---QAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEV 160 (253)
T ss_dssp CSHHHHHHHHHTTCSEEEESHHHHHCTHHHHHHHHHHCG---GGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEChHHHhChHHHHHHHHHcCC---CcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHH
Confidence 456788889999999998864 3455556666655431 111 11111 1111 234445666
Q ss_pred Hhc-CCEEEEe-CCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEe
Q 008172 327 VEA-SDGIMVA-RGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALML 404 (575)
Q Consensus 327 ~~~-sDgImIa-RGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmL 404 (575)
.+. +|.|++- +.-=+...+. ++. .-+++ +...+.|++... ..-+.+ |+..+...|+|+++.
T Consensus 161 ~~~G~~~i~~~~~~~~g~~~g~-~~~-~~~~l---~~~~~ipvia~G---------GI~~~~---d~~~~~~~Gadgv~v 223 (253)
T 1thf_D 161 EKRGAGEILLTSIDRDGTKSGY-DTE-MIRFV---RPLTTLPIIASG---------GAGKME---HFLEAFLAGADAALA 223 (253)
T ss_dssp HHTTCSEEEEEETTTTTSCSCC-CHH-HHHHH---GGGCCSCEEEES---------CCCSHH---HHHHHHHTTCSEEEE
T ss_pred HHCCCCEEEEEeccCCCCCCCC-CHH-HHHHH---HHhcCCCEEEEC---------CCCCHH---HHHHHHHcCChHHHH
Confidence 666 7999884 1110111222 222 22233 234589999753 333444 444555689999998
Q ss_pred ccCcCCCC-CHHHHHHH
Q 008172 405 SGESAIGP-FGQKAVSV 420 (575)
Q Consensus 405 s~ETa~G~-yPveaV~~ 420 (575)
..---.+. -|.++++.
T Consensus 224 Gsal~~~~~~~~~~~~~ 240 (253)
T 1thf_D 224 ASVFHFREIDVRELKEY 240 (253)
T ss_dssp SHHHHTTCSCHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHH
Confidence 63323333 35555444
No 93
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=80.97 E-value=16 Score=35.50 Aligned_cols=104 Identities=11% Similarity=0.073 Sum_probs=65.9
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVDIPL 346 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e~~~ 346 (575)
.+.++.+++.|++.|=+.+ +++...+.++....+. .++.+-+-. .---+..+.-++. +|++..+--|
T Consensus 41 ~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~--~~~~igagt--vl~~d~~~~A~~aGAd~v~~p~~d------- 108 (225)
T 1mxs_A 41 LPLADALAAGGIRTLEVTL-RSQHGLKAIQVLREQR--PELCVGAGT--VLDRSMFAAVEAAGAQFVVTPGIT------- 108 (225)
T ss_dssp HHHHHHHHHTTCCEEEEES-SSTHHHHHHHHHHHHC--TTSEEEEEC--CCSHHHHHHHHHHTCSSEECSSCC-------
T ss_pred HHHHHHHHHCCCCEEEEec-CCccHHHHHHHHHHhC--cccEEeeCe--EeeHHHHHHHHHCCCCEEEeCCCC-------
Confidence 3556778899999999996 4555555555444332 234443332 1111445555555 8999854212
Q ss_pred CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEe
Q 008172 347 EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALML 404 (575)
Q Consensus 347 e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmL 404 (575)
..+++.|+++|.|.+.-+ -| .+++..|...|+|.+.+
T Consensus 109 -------~~v~~~~~~~g~~~i~G~-----------~t---~~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 109 -------EDILEAGVDSEIPLLPGI-----------ST---PSEIMMGYALGYRRFKL 145 (225)
T ss_dssp -------HHHHHHHHHCSSCEECEE-----------CS---HHHHHHHHTTTCCEEEE
T ss_pred -------HHHHHHHHHhCCCEEEee-----------CC---HHHHHHHHHCCCCEEEE
Confidence 368899999999988421 12 23457888999999999
No 94
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=80.70 E-value=23 Score=37.89 Aligned_cols=124 Identities=17% Similarity=0.188 Sum_probs=74.5
Q ss_pred cCHHHHHHHHHcCCCEEEecCcC-ChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCC-
Q 008172 266 KDWDDIEFGIAEGVDFIAMSFVC-DADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGV- 342 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~SfV~-sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~- 342 (575)
...+.++++++.|+|.|++.... ..+...+..+.+.+.-..-..+...+-+.+.... .++. +|+|.++-|-=+.
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~---~~~~Gad~I~vg~g~g~~~ 309 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARA---LYDAGVDVVKVGIGPGSIC 309 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEECSHHHHHH---HHHTTCSEEEECSSCCTTB
T ss_pred hHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCCCCcEeCCCccCHHHHHH---HHHcCCCEEEECccCCcce
Confidence 34678899999999999987631 1122222222222221122334556666655543 3334 8999997541000
Q ss_pred ------CCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 343 ------DIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 343 ------e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
..+.+ .....+++...+...+.|+|...-+- -..|+..++..|||++++.
T Consensus 310 ~tr~~~~~~~p-~~~~l~~~~~~~~~~~ipvia~GGi~------------~~~di~kal~~GA~~v~vG 365 (491)
T 1zfj_A 310 TTRVVAGVGVP-QVTAIYDAAAVAREYGKTIIADGGIK------------YSGDIVKALAAGGNAVMLG 365 (491)
T ss_dssp CHHHHTCCCCC-HHHHHHHHHHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred EEeeecCCCCC-cHHHHHHHHHHHhhcCCCEEeeCCCC------------CHHHHHHHHHcCCcceeeC
Confidence 11222 24444677777888899999865433 3468899999999999994
No 95
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=80.00 E-value=10 Score=36.17 Aligned_cols=102 Identities=17% Similarity=0.116 Sum_probs=64.9
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVDIPL 346 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e~~~ 346 (575)
.+.++.+++.|+++|=+.+ +++...+.++...+ ++..+-+-. .---+..+.-++. +|++..+-.|
T Consensus 28 ~~~~~~l~~gGv~~iel~~-k~~~~~~~i~~~~~----~~~~~gag~--vl~~d~~~~A~~~GAd~v~~~~~d------- 93 (207)
T 2yw3_A 28 LGLARVLEEEGVGALEITL-RTEKGLEALKALRK----SGLLLGAGT--VRSPKEAEAALEAGAAFLVSPGLL------- 93 (207)
T ss_dssp HHHHHHHHHTTCCEEEEEC-SSTHHHHHHHHHTT----SSCEEEEES--CCSHHHHHHHHHHTCSEEEESSCC-------
T ss_pred HHHHHHHHHcCCCEEEEeC-CChHHHHHHHHHhC----CCCEEEeCe--EeeHHHHHHHHHcCCCEEEcCCCC-------
Confidence 4556777899999999986 55555554544332 233333322 1112555555555 8999865222
Q ss_pred CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEe
Q 008172 347 EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALML 404 (575)
Q Consensus 347 e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmL 404 (575)
..+++.|++.|.|++.-+ -| .+++..|...|+|.+.+
T Consensus 94 -------~~v~~~~~~~g~~~i~G~-----------~t---~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 94 -------EEVAALAQARGVPYLPGV-----------LT---PTEVERALALGLSALKF 130 (207)
T ss_dssp -------HHHHHHHHHHTCCEEEEE-----------CS---HHHHHHHHHTTCCEEEE
T ss_pred -------HHHHHHHHHhCCCEEecC-----------CC---HHHHHHHHHCCCCEEEE
Confidence 267888999999988631 23 33457788899999988
No 96
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=79.37 E-value=14 Score=35.14 Aligned_cols=131 Identities=13% Similarity=0.124 Sum_probs=69.9
Q ss_pred CHHHHHHHHHcCCCEEEecCcCC--h--hhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEE---EEeC-
Q 008172 267 DWDDIEFGIAEGVDFIAMSFVCD--A--DSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGI---MVAR- 337 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~SfV~s--a--~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgI---mIaR- 337 (575)
+.+.++.+++.|+|+|.+..... + +.+.++.+.+.+.. ....++..+.+.+-. ....+. +|.| +.+.
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~-~~~~v~~~~~t~~ea---~~a~~~Gad~i~~~v~g~~ 165 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKY-PNQLLMADISTFDEG---LVAHQAGIDFVGTTLSGYT 165 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHC-TTCEEEEECSSHHHH---HHHHHTTCSEEECTTTTSS
T ss_pred hHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhC-CCCeEEEeCCCHHHH---HHHHHcCCCEEeeeccccC
Confidence 56778889999999998755432 2 12333333333332 245688877775442 222222 7887 2232
Q ss_pred -CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHH
Q 008172 338 -GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQK 416 (575)
Q Consensus 338 -GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPve 416 (575)
+..+ ....++..+ +++ +.. +.|++...- .-|.. |+..+...|+|++++.. +.=. |.+
T Consensus 166 ~~~~~--~~~~~~~~i-~~~---~~~-~ipvia~GG---------I~s~~---~~~~~~~~Gad~v~vGs--al~~-p~~ 223 (234)
T 1yxy_A 166 PYSRQ--EAGPDVALI-EAL---CKA-GIAVIAEGK---------IHSPE---EAKKINDLGVAGIVVGG--AITR-PKE 223 (234)
T ss_dssp TTSCC--SSSCCHHHH-HHH---HHT-TCCEEEESC---------CCSHH---HHHHHHTTCCSEEEECH--HHHC-HHH
T ss_pred CCCcC--CCCCCHHHH-HHH---HhC-CCCEEEECC---------CCCHH---HHHHHHHCCCCEEEEch--HHhC-hHH
Confidence 2211 112333222 222 233 899997542 33333 44556667999999863 2222 666
Q ss_pred HHHHHHH
Q 008172 417 AVSVLQM 423 (575)
Q Consensus 417 aV~~m~~ 423 (575)
+++.+.+
T Consensus 224 ~~~~l~~ 230 (234)
T 1yxy_A 224 IAERFIE 230 (234)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665543
No 97
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=78.91 E-value=12 Score=35.59 Aligned_cols=121 Identities=17% Similarity=0.163 Sum_probs=64.4
Q ss_pred CHHHHHHHHHcCCCEEEecC--cCChhhHHHHHHHHhccCCCCce-----------EEeeecC------HHHHhcHHHHH
Q 008172 267 DWDDIEFGIAEGVDFIAMSF--VCDADSVRHLKKYVSGKSSRSIK-----------VLAKIEN------LESLQKFEEIV 327 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~Sf--V~sa~dv~~ir~~l~~~~~~~i~-----------IIaKIEt------~~av~nldeI~ 327 (575)
+.++++.+++.|+|+|.+.. ..+++.+.++.+.+ +.+.+. +..++.. ...++-+..+.
T Consensus 88 ~~~~~~~~~~~Gad~V~i~~~~~~~~~~~~~~~~~~---g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~ 164 (253)
T 1h5y_A 88 SLEDATTLFRAGADKVSVNTAAVRNPQLVALLAREF---GSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVE 164 (253)
T ss_dssp SHHHHHHHHHHTCSEEEESHHHHHCTHHHHHHHHHH---CGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEChHHhhCcHHHHHHHHHc---CCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHH
Confidence 45677888999999999653 34444455544433 211121 1233321 12344455666
Q ss_pred hc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEecc
Q 008172 328 EA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 328 ~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ 406 (575)
+. +|.|.+..-+.+-...-... ..-+++ +...+.|++...- .-+. .|+..+...|+|+++...
T Consensus 165 ~~G~d~i~~~~~~~~g~~~~~~~-~~i~~l---~~~~~~pvia~GG---------i~~~---~~~~~~~~~Ga~~v~vgs 228 (253)
T 1h5y_A 165 ELGAGEILLTSIDRDGTGLGYDV-ELIRRV---ADSVRIPVIASGG---------AGRV---EHFYEAAAAGADAVLAAS 228 (253)
T ss_dssp HHTCSEEEEEETTTTTTCSCCCH-HHHHHH---HHHCSSCEEEESC---------CCSH---HHHHHHHHTTCSEEEESH
T ss_pred hCCCCEEEEecccCCCCcCcCCH-HHHHHH---HHhcCCCEEEeCC---------CCCH---HHHHHHHHcCCcHHHHHH
Confidence 66 89998753332111111121 222333 2335889997532 2222 455666678999999964
No 98
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=78.45 E-value=38 Score=35.32 Aligned_cols=157 Identities=10% Similarity=0.116 Sum_probs=99.7
Q ss_pred CCCccCHHHHHHHH-HcCCCEEEe-cCcCChhhHHHHHHHHhccCCCCceEEeee-cCHHHHhcH-HHHHhc-CCE--EE
Q 008172 262 TLSKKDWDDIEFGI-AEGVDFIAM-SFVCDADSVRHLKKYVSGKSSRSIKVLAKI-ENLESLQKF-EEIVEA-SDG--IM 334 (575)
Q Consensus 262 ~lsekD~~di~~al-~~gvd~I~~-SfV~sa~dv~~ir~~l~~~~~~~i~IIaKI-Et~~av~nl-deI~~~-sDg--Im 334 (575)
.+|..|+-.|...+ +.|+|.|=+ +|+.++.|.+.++.+.... ++..+.+-. =+...++.. +.+... .|. ++
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~--~~~~i~~l~r~~~~di~~a~~al~~ag~~~v~if 107 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTI--TKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTF 107 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTTC--SSSEEEEEEESSHHHHHHHHHHHTTSSSEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHhC--CCCeEEEEecCCHHHHHHHHHHHhhCCCCEEEEE
Confidence 57777876665554 689999866 5677888999998876542 344443322 144555432 222222 343 45
Q ss_pred EeCCCCC----CCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEeccCcC
Q 008172 335 VARGDLG----VDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLSGESA 409 (575)
Q Consensus 335 IaRGDLg----~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs~ETa 409 (575)
++=-|+- +....+++.....++++.|+++|..|.+..+ ...+-+...+.+++. +...|+|.+.|. +|.
T Consensus 108 ~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~e------d~~r~~~~~~~~~~~~~~~~Ga~~i~l~-DT~ 180 (370)
T 3rmj_A 108 IATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCE------DALRSEIDFLAEICGAVIEAGATTINIP-DTV 180 (370)
T ss_dssp EECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHHTCCEEEEE-CSS
T ss_pred ecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecC------CCCccCHHHHHHHHHHHHHcCCCEEEec-Ccc
Confidence 5545542 2233455555666788999999998876432 122334444566666 567899999998 888
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 008172 410 IGPFGQKAVSVLQMASSR 427 (575)
Q Consensus 410 ~G~yPveaV~~m~~I~~~ 427 (575)
=.-.|-++-++++.+.+.
T Consensus 181 G~~~P~~~~~lv~~l~~~ 198 (370)
T 3rmj_A 181 GYSIPYKTEEFFRELIAK 198 (370)
T ss_dssp SCCCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHh
Confidence 888999888877766544
No 99
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=78.25 E-value=39 Score=35.07 Aligned_cols=119 Identities=13% Similarity=0.308 Sum_probs=86.2
Q ss_pred HHHHHHHHHcCCCEEEec--------------Cc----------------CChhhHHHHHHHHhccCCCCceEEeeecCH
Q 008172 268 WDDIEFGIAEGVDFIAMS--------------FV----------------CDADSVRHLKKYVSGKSSRSIKVLAKIENL 317 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~S--------------fV----------------~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~ 317 (575)
.+.++.|.+.|+|.|=.- |- -+.++.++++++.++.| +.+++-+=+.
T Consensus 38 ~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~G---i~~~st~~d~ 114 (349)
T 2wqp_A 38 FEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKG---MIFISTLFSR 114 (349)
T ss_dssp HHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTT---CEEEEEECSH
T ss_pred HHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhC---CeEEEeeCCH
Confidence 456677888999998642 32 14467788888888776 7899988888
Q ss_pred HHHhcHHHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHH
Q 008172 318 ESLQKFEEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVR 396 (575)
Q Consensus 318 ~av~nldeI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~ 396 (575)
++++-+++ . +|.+=||-+|+ .+.| +++++-+.|||||+.|-| -|-+|+...+..+.
T Consensus 115 ~svd~l~~---~~v~~~KI~S~~~------~n~~-----LL~~va~~gkPviLstGm---------at~~Ei~~Ave~i~ 171 (349)
T 2wqp_A 115 AAALRLQR---MDIPAYKIGSGEC------NNYP-----LIKLVASFGKPIILSTGM---------NSIESIKKSVEIIR 171 (349)
T ss_dssp HHHHHHHH---HTCSCEEECGGGT------TCHH-----HHHHHHTTCSCEEEECTT---------CCHHHHHHHHHHHH
T ss_pred HHHHHHHh---cCCCEEEECcccc------cCHH-----HHHHHHhcCCeEEEECCC---------CCHHHHHHHHHHHH
Confidence 88866655 4 69999998877 3444 466677789999998865 37789888888776
Q ss_pred -cccceEEeccCcCCCCCHH
Q 008172 397 -QYADALMLSGESAIGPFGQ 415 (575)
Q Consensus 397 -~G~D~vmLs~ETa~G~yPv 415 (575)
.|.+.++|-. +-.||.
T Consensus 172 ~~G~~iiLlhc---~s~Yp~ 188 (349)
T 2wqp_A 172 EAGVPYALLHC---TNIYPT 188 (349)
T ss_dssp HHTCCEEEEEC---CCCSSC
T ss_pred HcCCCEEEEec---cCCCCC
Confidence 4667777742 344764
No 100
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=77.96 E-value=20 Score=36.26 Aligned_cols=131 Identities=12% Similarity=0.097 Sum_probs=81.1
Q ss_pred HHHHHHHcCCCEEEec-CcCChh------hHHHHHHHHhccCCCCceEEeeecCH---------HHHhcHHHHHhc--CC
Q 008172 270 DIEFGIAEGVDFIAMS-FVCDAD------SVRHLKKYVSGKSSRSIKVLAKIENL---------ESLQKFEEIVEA--SD 331 (575)
Q Consensus 270 di~~al~~gvd~I~~S-fV~sa~------dv~~ir~~l~~~~~~~i~IIaKIEt~---------~av~nldeI~~~--sD 331 (575)
..+.|++.|+|.|.+- |+.+.. ++.++++.+.+.+ +.+|+ |+. +.+...-.++.. +|
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~G---lpvIi--e~~~G~~~~~d~e~i~~aariA~elGAD 204 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVG---MPTMA--VTGVGKDMVRDQRYFSLATRIAAEMGAQ 204 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTT---CCEEE--EECC----CCSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcC---CEEEE--ECCCCCccCCCHHHHHHHHHHHHHhCCC
Confidence 4577899999998764 444432 2334444444443 45554 332 223333444444 68
Q ss_pred EEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCC-CChhhHhhHHHHHHcccceEEeccCcCC
Q 008172 332 GIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPT-PTRAEVADVSEAVRQYADALMLSGESAI 410 (575)
Q Consensus 332 gImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~-PtrAEv~Dv~nav~~G~D~vmLs~ETa~ 410 (575)
.|=.. ++.+. .+++.+.| ..||+++.- +. +++.=...+..++..|++++.....-..
T Consensus 205 ~VKt~-------~t~e~----~~~vv~~~---~vPVv~~GG--------~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q 262 (295)
T 3glc_A 205 IIKTY-------YVEKG----FERIVAGC---PVPIVIAGG--------KKLPEREALEMCWQAIDQGASGVDMGRNIFQ 262 (295)
T ss_dssp EEEEE-------CCTTT----HHHHHHTC---SSCEEEECC--------SCCCHHHHHHHHHHHHHTTCSEEEESHHHHT
T ss_pred EEEeC-------CCHHH----HHHHHHhC---CCcEEEEEC--------CCCCHHHHHHHHHHHHHhCCeEEEeHHHHhc
Confidence 76665 22222 34454444 689987642 12 2233356677899999999999877777
Q ss_pred CCCHHHHHHHHHHHHHH
Q 008172 411 GPFGQKAVSVLQMASSR 427 (575)
Q Consensus 411 G~yPveaV~~m~~I~~~ 427 (575)
-..|.+.++.+..+..+
T Consensus 263 ~~dp~~~~~al~~ivh~ 279 (295)
T 3glc_A 263 SDHPVAMMKAVQAVVHH 279 (295)
T ss_dssp SSSHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhC
Confidence 78999999999988765
No 101
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=77.91 E-value=10 Score=38.02 Aligned_cols=144 Identities=14% Similarity=0.021 Sum_probs=76.6
Q ss_pred HHHHHHHHcCCC-EEEecCc-----------CChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-----CC
Q 008172 269 DDIEFGIAEGVD-FIAMSFV-----------CDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-----SD 331 (575)
Q Consensus 269 ~di~~al~~gvd-~I~~SfV-----------~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-----sD 331 (575)
+..+.+.+.|+| +|-+.|- .+.+.+.++-+.+.+. -++.++.||=---..+++.++++. +|
T Consensus 110 ~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~--~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d 187 (311)
T 1jub_A 110 AMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTF--FTKPLGVKLPPYFDLVHFDIMAEILNQFPLT 187 (311)
T ss_dssp HHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTT--CCSCEEEEECCCCSHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHh--cCCCEEEEECCCCCHHHHHHHHHHHHHcCCc
Confidence 344556678999 9888652 2556666666656543 246789998321112233333333 79
Q ss_pred EEEEeCCC---CCCC-------C----------CCCChHHHHHHHHHHHHH-c--CCCEEEehhhHHhhhcCCCCChhhH
Q 008172 332 GIMVARGD---LGVD-------I----------PLEQIPTVQEIIIHVCRQ-L--NKPVIVASQLLESMVEYPTPTRAEV 388 (575)
Q Consensus 332 gImIaRGD---Lg~e-------~----------~~e~v~~~Qk~Ii~~c~~-~--gKPvivaTq~LeSM~~~p~PtrAEv 388 (575)
+|.+.-.- +.++ + +....+.. -+.++..++ . ..|||...-+- ..
T Consensus 188 ~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~-~~~i~~v~~~~~~~ipvi~~GGI~------------~~ 254 (311)
T 1jub_A 188 YVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTA-LANVRAFYTRLKPEIQIIGTGGIE------------TG 254 (311)
T ss_dssp EEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHH-HHHHHHHHTTSCTTSEEEEESSCC------------SH
T ss_pred EEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHH-HHHHHHHHHhcCCCCCEEEECCCC------------CH
Confidence 98774210 0011 0 11112322 345555554 4 68999865432 33
Q ss_pred hhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhh
Q 008172 389 ADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWS 432 (575)
Q Consensus 389 ~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~ 432 (575)
.|+..++..|+|+||+..---. +-| .+..+|.+.-+.|.
T Consensus 255 ~da~~~l~~GAd~V~vg~~~l~-~~p----~~~~~i~~~l~~~l 293 (311)
T 1jub_A 255 QDAFEHLLCGATMLQIGTALHK-EGP----AIFDRIIKELEEIM 293 (311)
T ss_dssp HHHHHHHHHTCSEEEECHHHHH-HCT----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEchHHHh-cCc----HHHHHHHHHHHHHH
Confidence 5667778899999999733221 123 34455554444443
No 102
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=77.40 E-value=23 Score=35.43 Aligned_cols=132 Identities=13% Similarity=0.077 Sum_probs=78.0
Q ss_pred HHHHHHHHHcCCCEEEecC-cCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSF-VCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVDIP 345 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~Sf-V~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e~~ 345 (575)
...+..+...|+|.|.+-- ..+.++++++.++..+.| ..+++-+-+.+= ++..++. +|.|=+..-||... .
T Consensus 132 ~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lG---l~~lvevh~~eE---l~~A~~~ga~iIGinnr~l~t~-~ 204 (272)
T 3tsm_A 132 PYQVYEARSWGADCILIIMASVDDDLAKELEDTAFALG---MDALIEVHDEAE---MERALKLSSRLLGVNNRNLRSF-E 204 (272)
T ss_dssp THHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTT---CEEEEEECSHHH---HHHHTTSCCSEEEEECBCTTTC-C
T ss_pred HHHHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcC---CeEEEEeCCHHH---HHHHHhcCCCEEEECCCCCccC-C
Confidence 3457789999999976653 335677888877777665 456666654432 2333333 78888885566431 1
Q ss_pred CCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHH
Q 008172 346 LEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVL 421 (575)
Q Consensus 346 ~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m 421 (575)
.++.. -.+++.... .+.|++. ....-|++ |+..+...|+|+++...---....|.++++-|
T Consensus 205 -~dl~~-~~~L~~~ip-~~~~vIa---------esGI~t~e---dv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l 265 (272)
T 3tsm_A 205 -VNLAV-SERLAKMAP-SDRLLVG---------ESGIFTHE---DCLRLEKSGIGTFLIGESLMRQHDVAAATRAL 265 (272)
T ss_dssp -BCTHH-HHHHHHHSC-TTSEEEE---------ESSCCSHH---HHHHHHTTTCCEEEECHHHHTSSCHHHHHHHH
T ss_pred -CChHH-HHHHHHhCC-CCCcEEE---------ECCCCCHH---HHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHH
Confidence 12211 122222221 2677775 33455555 55666778999998864444456677666644
No 103
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=77.22 E-value=8.1 Score=40.31 Aligned_cols=114 Identities=18% Similarity=0.273 Sum_probs=62.9
Q ss_pred HHHHHHcCCCEEEec-------CcC---ChhhHHHHHHHHhccCCCCceEEee-ecCHHHHhcHHHHHhc-CCEEEEeCC
Q 008172 271 IEFGIAEGVDFIAMS-------FVC---DADSVRHLKKYVSGKSSRSIKVLAK-IENLESLQKFEEIVEA-SDGIMVARG 338 (575)
Q Consensus 271 i~~al~~gvd~I~~S-------fV~---sa~dv~~ir~~l~~~~~~~i~IIaK-IEt~~av~nldeI~~~-sDgImIaRG 338 (575)
.+...+.|+|++.+. |+. +.+++.++++.. .+.+++| |-+++.. ....+. +|+|+|++|
T Consensus 171 a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~------~~pvi~ggi~t~e~a---~~~~~~Gad~i~vg~G 241 (393)
T 2qr6_A 171 APIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL------DVPVIAGGVNDYTTA---LHMMRTGAVGIIVGGG 241 (393)
T ss_dssp HHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC------SSCEEEECCCSHHHH---HHHHTTTCSEEEESCC
T ss_pred HHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc------CCCEEECCcCCHHHH---HHHHHcCCCEEEECCC
Confidence 344457899998764 222 335555555532 3556664 4454433 333334 899999875
Q ss_pred CCCC----CCCCCChHHHHHHHHHHH----HHcC---CCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEecc
Q 008172 339 DLGV----DIPLEQIPTVQEIIIHVC----RQLN---KPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 339 DLg~----e~~~e~v~~~Qk~Ii~~c----~~~g---KPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ 406 (575)
--+. ..+.+. ...-.++.+.+ .+.+ .|||.+.-+- --.|+..++..|||+|++..
T Consensus 242 g~~~~~~~~~g~~~-~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~------------~~~dv~kalalGA~~V~iG~ 307 (393)
T 2qr6_A 242 ENTNSLALGMEVSM-ATAIADVAAARRDYLDETGGRYVHIIADGSIE------------NSGDVVKAIACGADAVVLGS 307 (393)
T ss_dssp SCCHHHHTSCCCCH-HHHHHHHHHHHHHHHHHHTSCCCEEEECSSCC------------SHHHHHHHHHHTCSEEEECG
T ss_pred cccccccCCCCCCh-HHHHHHHHHHHHHhHhhcCCcceEEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 3211 112221 11122333332 2244 8998765433 34688999999999999963
No 104
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=76.55 E-value=11 Score=36.14 Aligned_cols=129 Identities=13% Similarity=0.158 Sum_probs=68.0
Q ss_pred HHHHHcCCCEEEecCc---CChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCC-CCCCC--
Q 008172 272 EFGIAEGVDFIAMSFV---CDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDL-GVDIP-- 345 (575)
Q Consensus 272 ~~al~~gvd~I~~SfV---~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDL-g~e~~-- 345 (575)
..+.+.|+|+|.+..- ...+++.++.+...+.| +.+|.-+-+.+-.+.+.++ -.+.|-+.+.++ | .|
T Consensus 76 ~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~G---l~~iv~v~~~~e~~~~~~~--~~~~i~~~~~~~iG--tG~~ 148 (219)
T 2h6r_A 76 EAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLG---LETIVCTNNINTSKAVAAL--SPDCIAVEPPELIG--TGIP 148 (219)
T ss_dssp HHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHT---CEEEEEESSSHHHHHHTTT--CCSEEEECCCC---------
T ss_pred HHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCC---CeEEEEeCCchHHHHHHhC--CCCEEEEEeccccc--cCCC
Confidence 5678999999999885 44556666666666665 4556555333333333222 146666777776 3 22
Q ss_pred -CCChHH-HHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHH
Q 008172 346 -LEQIPT-VQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSV 420 (575)
Q Consensus 346 -~e~v~~-~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~ 420 (575)
...-+. ++ .+.+..++. +.|++... ..-+. .++..+...|+|+++..+---.-..|.+.++-
T Consensus 149 ~~t~~~~~~~-~~~~~ir~~~~~~~ii~gg---------GI~~~---~~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~ 214 (219)
T 2h6r_A 149 VSKANPEVVE-GTVRAVKEINKDVKVLCGA---------GISKG---EDVKAALDLGAEGVLLASGVVKAKNVEEAIRE 214 (219)
T ss_dssp -------CSH-HHHHHHHHHCTTCEEEECS---------SCCSH---HHHHHHHTTTCCCEEESHHHHTCSSHHHHHHH
T ss_pred CccCCHHHHH-HHHHHHHhccCCCeEEEEe---------CcCcH---HHHHHHhhCCCCEEEEcHHHhCcccHHHHHHH
Confidence 111111 22 334444443 56777532 22222 23444567899999986433334456555543
No 105
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=76.52 E-value=54 Score=32.87 Aligned_cols=156 Identities=15% Similarity=0.122 Sum_probs=97.2
Q ss_pred CCCccCHHHHH-HHHHcCCCEEEec-CcCChhhHHHHHHHHhccCCCCceEEeeecC-HHHHhcHHHHH-hc-CCE--EE
Q 008172 262 TLSKKDWDDIE-FGIAEGVDFIAMS-FVCDADSVRHLKKYVSGKSSRSIKVLAKIEN-LESLQKFEEIV-EA-SDG--IM 334 (575)
Q Consensus 262 ~lsekD~~di~-~al~~gvd~I~~S-fV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt-~~av~nldeI~-~~-sDg--Im 334 (575)
.+|..|+..|- ...+.|++.|=+. +..++.|.+.++.+.+.. +++.+.+-.-+ ..+++..-+-+ .. .|. ++
T Consensus 23 ~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~--~~~~i~~l~~~~~~di~~a~~~~~~ag~~~v~i~ 100 (293)
T 3ewb_X 23 NFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAI--KHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIF 100 (293)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHC--CSSEEEEEEESSHHHHHHHHHHHTTCSSEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhc--CCCEEEEEecCCHHHHHHHHHHHhhcCCCEEEEE
Confidence 45667765554 4456899999774 445677877777765543 45566555533 33443222211 11 343 34
Q ss_pred EeCCCCC----CCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEeccCcC
Q 008172 335 VARGDLG----VDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLSGESA 409 (575)
Q Consensus 335 IaRGDLg----~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs~ETa 409 (575)
++=-|+- +....++.....+++++.++++|..|.+... ..++-+...+.+++. +...|+|.+.|. +|.
T Consensus 101 ~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l~-DT~ 173 (293)
T 3ewb_X 101 LATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPE------DATRSDRAFLIEAVQTAIDAGATVINIP-DTV 173 (293)
T ss_dssp EECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHTTCCEEEEE-CSS
T ss_pred ecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEec------cCCCCCHHHHHHHHHHHHHcCCCEEEec-CCC
Confidence 4444432 2333455666677899999999999987542 223344555666666 566899999998 888
Q ss_pred CCCCHHHHHHHHHHHHH
Q 008172 410 IGPFGQKAVSVLQMASS 426 (575)
Q Consensus 410 ~G~yPveaV~~m~~I~~ 426 (575)
=.-.|.+.-++++.+.+
T Consensus 174 G~~~P~~v~~lv~~l~~ 190 (293)
T 3ewb_X 174 GYTNPTEFGQLFQDLRR 190 (293)
T ss_dssp SCCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 88899888877776643
No 106
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=76.47 E-value=11 Score=37.30 Aligned_cols=118 Identities=14% Similarity=0.065 Sum_probs=69.2
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEe--CCCC-CCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVA--RGDL-GVDI 344 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIa--RGDL-g~e~ 344 (575)
.+.++.+.+.|+|+|.++-... +++.++.+.+++.|.+.+.+++-- ...+.+.+|++.++|.... .-+. |..-
T Consensus 112 ~~~~~~~~~aGadgii~~d~~~-e~~~~~~~~~~~~g~~~i~l~~p~---t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~ 187 (268)
T 1qop_A 112 DAFYARCEQVGVDSVLVADVPV-EESAPFRQAALRHNIAPIFICPPN---ADDDLLRQVASYGRGYTYLLSRSGVTGAEN 187 (268)
T ss_dssp HHHHHHHHHHTCCEEEETTCCG-GGCHHHHHHHHHTTCEEECEECTT---CCHHHHHHHHHHCCSCEEEESSSSCCCSSS
T ss_pred HHHHHHHHHcCCCEEEEcCCCH-HHHHHHHHHHHHcCCcEEEEECCC---CCHHHHHHHHhhCCCcEEEEecCCcCCCcc
Confidence 4566778899999999987654 678888888887763223333322 3446788888887754322 1111 1111
Q ss_pred CC-CChHHHHHHHHHHHHH-cCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 345 PL-EQIPTVQEIIIHVCRQ-LNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 345 ~~-e~v~~~Qk~Ii~~c~~-~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
+. +.+...-+ ..++ .+.|+++..- .-|. .++..++..|+|+++..
T Consensus 188 ~~~~~~~~~i~----~lr~~~~~pi~vggG---------I~t~---e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 188 RGALPLHHLIE----KLKEYHAAPALQGFG---------ISSP---EQVSAAVRAGAAGAISG 234 (268)
T ss_dssp CC--CCHHHHH----HHHHTTCCCEEEESS---------CCSH---HHHHHHHHTTCSEEEEC
T ss_pred CCCchHHHHHH----HHHhccCCcEEEECC---------CCCH---HHHHHHHHcCCCEEEEC
Confidence 11 22222222 3333 3789988543 2222 34466678999999985
No 107
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=76.07 E-value=11 Score=36.92 Aligned_cols=102 Identities=11% Similarity=0.129 Sum_probs=60.1
Q ss_pred HHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCCCCCCh
Q 008172 271 IEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVDIPLEQI 349 (575)
Q Consensus 271 i~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e~~~e~v 349 (575)
.+.+++.|++.|=+.| ++++..+.++.+-++. .++.+-+ -|.--.+..+..++. +|.|+. ++
T Consensus 52 a~al~~gGi~~iEvt~-~t~~a~e~I~~l~~~~--~~~~iGa--GTVlt~~~a~~Ai~AGA~fIvs-P~----------- 114 (232)
T 4e38_A 52 GKVLAENGLPAAEITF-RSDAAVEAIRLLRQAQ--PEMLIGA--GTILNGEQALAAKEAGATFVVS-PG----------- 114 (232)
T ss_dssp HHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC--TTCEEEE--ECCCSHHHHHHHHHHTCSEEEC-SS-----------
T ss_pred HHHHHHCCCCEEEEeC-CCCCHHHHHHHHHHhC--CCCEEeE--CCcCCHHHHHHHHHcCCCEEEe-CC-----------
Confidence 3456678888888876 4555444444333222 1222222 222224445555555 777753 12
Q ss_pred HHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 350 PTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 350 ~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
.-..+++.|+++|.|++- .-+-.+++..|...|+|.+-+-
T Consensus 115 --~~~~vi~~~~~~gi~~ip--------------Gv~TptEi~~A~~~Gad~vK~F 154 (232)
T 4e38_A 115 --FNPNTVRACQEIGIDIVP--------------GVNNPSTVEAALEMGLTTLKFF 154 (232)
T ss_dssp --CCHHHHHHHHHHTCEEEC--------------EECSHHHHHHHHHTTCCEEEEC
T ss_pred --CCHHHHHHHHHcCCCEEc--------------CCCCHHHHHHHHHcCCCEEEEC
Confidence 124788899999999962 1123456688999999999883
No 108
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=75.98 E-value=23 Score=36.80 Aligned_cols=95 Identities=14% Similarity=0.214 Sum_probs=59.9
Q ss_pred hhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEE
Q 008172 291 DSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIV 369 (575)
Q Consensus 291 ~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviv 369 (575)
++.++++++.++.| +.+++-.=+.++++-+ .+. +|.+=||-+|+ .+.| +++.+-+.|||||+
T Consensus 78 e~~~~L~~~~~~~G---i~~~st~fD~~svd~l---~~~~v~~~KI~S~~~------~N~p-----LL~~va~~gKPviL 140 (350)
T 3g8r_A 78 EQMQKLVAEMKANG---FKAICTPFDEESVDLI---EAHGIEIIKIASCSF------TDWP-----LLERIARSDKPVVA 140 (350)
T ss_dssp HHHHHHHHHHHHTT---CEEEEEECSHHHHHHH---HHTTCCEEEECSSST------TCHH-----HHHHHHTSCSCEEE
T ss_pred HHHHHHHHHHHHcC---CcEEeccCCHHHHHHH---HHcCCCEEEECcccc------cCHH-----HHHHHHhhCCcEEE
Confidence 34444444444433 3444444344444333 334 78888887776 4444 45566789999999
Q ss_pred ehhhHHhhhcCCCCChhhHhhHHHHHHc-ccceEEeccCcCCCCCH
Q 008172 370 ASQLLESMVEYPTPTRAEVADVSEAVRQ-YADALMLSGESAIGPFG 414 (575)
Q Consensus 370 aTq~LeSM~~~p~PtrAEv~Dv~nav~~-G~D~vmLs~ETa~G~yP 414 (575)
.|-| -|-+|+...+..+.. |.+.++|-.++. ||
T Consensus 141 stGm---------stl~Ei~~Ave~i~~~g~~viLlhC~s~---YP 174 (350)
T 3g8r_A 141 STAG---------ARREDIDKVVSFMLHRGKDLTIMHCVAE---YP 174 (350)
T ss_dssp ECTT---------CCHHHHHHHHHHHHTTTCCEEEEECCCC---SS
T ss_pred ECCC---------CCHHHHHHHHHHHHHcCCCEEEEecCCC---CC
Confidence 9875 378899888887764 778777755654 66
No 109
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=75.84 E-value=18 Score=36.23 Aligned_cols=99 Identities=7% Similarity=0.117 Sum_probs=62.5
Q ss_pred HHHHHHHHcCCCEEEe------cCcCChhhHHHHHHHHhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeCC
Q 008172 269 DDIEFGIAEGVDFIAM------SFVCDADSVRHLKKYVSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVARG 338 (575)
Q Consensus 269 ~di~~al~~gvd~I~~------SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaRG 338 (575)
+.++|.++.|+|+|++ ++--|.++=.++-+...+....++.||+-+= +.++++......+. +|++|+.+-
T Consensus 28 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 107 (294)
T 3b4u_A 28 AHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPP 107 (294)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 5567889999999986 3445666665655544433224688988884 47777777666666 899999765
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHc---CCCEEEe
Q 008172 339 DLGVDIPLEQIPTVQEIIIHVCRQL---NKPVIVA 370 (575)
Q Consensus 339 DLg~e~~~e~v~~~Qk~Ii~~c~~~---gKPviva 370 (575)
...-..+.+.+...-+.| |.+. +.|+++.
T Consensus 108 ~y~~~~s~~~l~~~f~~v---a~a~p~~~lPiilY 139 (294)
T 3b4u_A 108 SYFKNVSDDGLFAWFSAV---FSKIGKDARDILVY 139 (294)
T ss_dssp CSSCSCCHHHHHHHHHHH---HHHHCTTCCCEEEE
T ss_pred cCCCCCCHHHHHHHHHHH---HHhcCCCCCcEEEE
Confidence 442211223333333344 4555 7999985
No 110
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=75.39 E-value=44 Score=31.12 Aligned_cols=128 Identities=9% Similarity=0.048 Sum_probs=67.8
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCCCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLE 347 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e~~~e 347 (575)
.+.++.+++.|+|+|.++. ... ++ .+..++.| ..++.-..|++-+. .....-+|.|.+-+++ ..+
T Consensus 70 ~~~i~~a~~~Gad~V~~~~-~~~-~~---~~~~~~~g---~~~~~g~~t~~e~~--~a~~~G~d~v~v~~t~---~~g-- 134 (212)
T 2v82_A 70 PEQVDALARMGCQLIVTPN-IHS-EV---IRRAVGYG---MTVCPGCATATEAF--TALEAGAQALKIFPSS---AFG-- 134 (212)
T ss_dssp HHHHHHHHHTTCCEEECSS-CCH-HH---HHHHHHTT---CEEECEECSHHHHH--HHHHTTCSEEEETTHH---HHC--
T ss_pred HHHHHHHHHcCCCEEEeCC-CCH-HH---HHHHHHcC---CCEEeecCCHHHHH--HHHHCCCCEEEEecCC---CCC--
Confidence 3578899999999997654 222 22 23333333 23333355544321 1112228999984332 011
Q ss_pred ChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCC----CCHHHHHHHH
Q 008172 348 QIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIG----PFGQKAVSVL 421 (575)
Q Consensus 348 ~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G----~yPveaV~~m 421 (575)
-+.+-+.+... +.|++...- -+. .++..+...|+|++....--..+ ..|.++++.+
T Consensus 135 -----~~~~~~l~~~~~~~ipvia~GG----------I~~---~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~~l 196 (212)
T 2v82_A 135 -----PQYIKALKAVLPSDIAVFAVGG----------VTP---ENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAF 196 (212)
T ss_dssp -----HHHHHHHHTTSCTTCEEEEESS----------CCT---TTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHHHH
T ss_pred -----HHHHHHHHHhccCCCeEEEeCC----------CCH---HHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHHHH
Confidence 12222223333 378887542 222 35566677899999986443333 3567777766
Q ss_pred HHHHHHH
Q 008172 422 QMASSRM 428 (575)
Q Consensus 422 ~~I~~~a 428 (575)
.+.++++
T Consensus 197 ~~~~~~~ 203 (212)
T 2v82_A 197 VKAYREA 203 (212)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6555443
No 111
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=75.25 E-value=11 Score=36.73 Aligned_cols=130 Identities=8% Similarity=0.061 Sum_probs=77.0
Q ss_pred CCEEEecCcCChhhHHHHHH---HHhccCCCCceEEeeecCHHHHhcHHHHHh--cCCEEEEeCCCCCCCCCCCChHHHH
Q 008172 279 VDFIAMSFVCDADSVRHLKK---YVSGKSSRSIKVLAKIENLESLQKFEEIVE--ASDGIMVARGDLGVDIPLEQIPTVQ 353 (575)
Q Consensus 279 vd~I~~SfV~sa~dv~~ir~---~l~~~~~~~i~IIaKIEt~~av~nldeI~~--~sDgImIaRGDLg~e~~~e~v~~~Q 353 (575)
+|+|.+-.-.+.+++.+..+ .+++.| ..+.+-.+-.|+ ++.+++++. ..|.|++-.-+-|.. +..-.+..-
T Consensus 86 Ad~itvH~ea~~~~~~~~i~~~~~i~~~G-~k~gvalnp~tp--~~~~~~~l~~g~~D~VlvmsV~pGf~-gq~f~~~~l 161 (227)
T 1tqx_A 86 SNQLTFHFEALNEDTERCIQLAKEIRDNN-LWCGISIKPKTD--VQKLVPILDTNLINTVLVMTVEPGFG-GQSFMHDMM 161 (227)
T ss_dssp SSEEEEEGGGGTTCHHHHHHHHHHHHTTT-CEEEEEECTTSC--GGGGHHHHTTTCCSEEEEESSCTTCS-SCCCCGGGH
T ss_pred CCEEEEeecCCccCHHHHHHHHHHHHHcC-CeEEEEeCCCCc--HHHHHHHhhcCCcCEEEEeeeccCCC-CcccchHHH
Confidence 99998776655446777766 777776 445554444554 788999999 899998865443322 222222222
Q ss_pred HHHHHHHHHc-CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHH
Q 008172 354 EIIIHVCRQL-NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMAS 425 (575)
Q Consensus 354 k~Ii~~c~~~-gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~ 425 (575)
++|-+..+.. +.++.+..- =+. ..+..++..|+|.+...+--...+.|.++++.+++..
T Consensus 162 ~ki~~lr~~~~~~~I~VdGG----------I~~---~ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~ 221 (227)
T 1tqx_A 162 GKVSFLRKKYKNLNIQVDGG----------LNI---ETTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSV 221 (227)
T ss_dssp HHHHHHHHHCTTCEEEEESS----------CCH---HHHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCeEEEECC----------CCH---HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHH
Confidence 2222222222 556655432 122 2345667789999998643333346889998887643
No 112
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=74.93 E-value=21 Score=36.72 Aligned_cols=132 Identities=13% Similarity=0.185 Sum_probs=69.5
Q ss_pred CCCccCHHHH--------HHHHHcCCCEEEecC-------------cCChh------------hHHHHHHHHhccCCCCc
Q 008172 262 TLSKKDWDDI--------EFGIAEGVDFIAMSF-------------VCDAD------------SVRHLKKYVSGKSSRSI 308 (575)
Q Consensus 262 ~lsekD~~di--------~~al~~gvd~I~~Sf-------------V~sa~------------dv~~ir~~l~~~~~~~i 308 (575)
.||+.|++.+ +.|.+.|+|+|=+-. .+... -+.++.+.+.+.-+++.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 6788887766 467889999986633 22211 12333333333212455
Q ss_pred eEEeeecC----------HHHHhcHHHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHH-cCCCEEEehhhHHh
Q 008172 309 KVLAKIEN----------LESLQKFEEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQ-LNKPVIVASQLLES 376 (575)
Q Consensus 309 ~IIaKIEt----------~~av~nldeI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~-~gKPvivaTq~LeS 376 (575)
.|..||-- .++++-...+.+. +|.|-+.-|........+.-+..+-..++..++ .+.||+....+
T Consensus 221 pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi--- 297 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLI--- 297 (349)
T ss_dssp CEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSC---
T ss_pred eEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCC---
Confidence 67788742 2233323333333 799998755443221111111122233333333 48898875322
Q ss_pred hhcCCCCChhhHhhHHHHHHcc-cceEEec
Q 008172 377 MVEYPTPTRAEVADVSEAVRQY-ADALMLS 405 (575)
Q Consensus 377 M~~~p~PtrAEv~Dv~nav~~G-~D~vmLs 405 (575)
-|.+ +...++..| +|+|++.
T Consensus 298 ------~t~e---~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 298 ------TTPE---QAETLLQAGSADLVLLG 318 (349)
T ss_dssp ------CCHH---HHHHHHHTTSCSEEEES
T ss_pred ------CCHH---HHHHHHHCCCceEEEec
Confidence 2332 335677888 9999996
No 113
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=74.74 E-value=20 Score=34.69 Aligned_cols=128 Identities=16% Similarity=0.166 Sum_probs=70.6
Q ss_pred HHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcH----HHHHhc-----CCEEEEeCCCC
Q 008172 270 DIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKF----EEIVEA-----SDGIMVARGDL 340 (575)
Q Consensus 270 di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nl----deI~~~-----sDgImIaRGDL 340 (575)
.++...+.|+|+|.+.-.-..+-++.+.+.+++.+ ..+.+++..-++.+.+.+ +.+++. .||+.++
T Consensus 83 ~~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g-~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~---- 157 (228)
T 3m47_A 83 ICRATFKAGADAIIVHGFPGADSVRACLNVAEEMG-REVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGP---- 157 (228)
T ss_dssp HHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHT-CEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECC----
T ss_pred HHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcC-CCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEEC----
Confidence 45556789999998865555666888888887665 456666777776543322 223222 4775543
Q ss_pred CCCCCCCChHHHHHHHHHHHHHcCC-CEEEehhhHHhhhcCCCCC-hhhHhhHHHHHHcccceEEeccCcCCCCCHHHHH
Q 008172 341 GVDIPLEQIPTVQEIIIHVCRQLNK-PVIVASQLLESMVEYPTPT-RAEVADVSEAVRQYADALMLSGESAIGPFGQKAV 418 (575)
Q Consensus 341 g~e~~~e~v~~~Qk~Ii~~c~~~gK-PvivaTq~LeSM~~~p~Pt-rAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV 418 (575)
... +..-+.+-+. .|. ..++ | |- |++-.+. .++..|+|.+....--.....|.+++
T Consensus 158 -----at~-~~e~~~ir~~---~~~~~~iv-~-----------PGI~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~ 215 (228)
T 3m47_A 158 -----STR-PERLSRLREI---IGQDSFLI-S-----------PGVGAQGGDP-GETLRFADAIIVGRSIYLADNPAAAA 215 (228)
T ss_dssp -----SSC-HHHHHHHHHH---HCSSSEEE-E-----------CC----------CGGGTCSEEEECHHHHTSSCHHHHH
T ss_pred -----CCC-hHHHHHHHHh---cCCCCEEE-e-----------cCcCcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHH
Confidence 221 1111222222 343 2333 2 21 3333356 77889999888865555556788887
Q ss_pred HHHHHH
Q 008172 419 SVLQMA 424 (575)
Q Consensus 419 ~~m~~I 424 (575)
+.+++.
T Consensus 216 ~~~~~~ 221 (228)
T 3m47_A 216 AGAIES 221 (228)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766544
No 114
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=74.70 E-value=14 Score=36.48 Aligned_cols=118 Identities=18% Similarity=0.243 Sum_probs=68.2
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEe--C-CCCCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVA--R-GDLGVDI 344 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIa--R-GDLg~e~ 344 (575)
.+.++.+.+.|+|++.++-+. .+++.++.+.+++.|.+-+.+++ -....+.+.+|++.++|.... + |=-|..-
T Consensus 112 ~~f~~~~~~aG~dgvii~dl~-~ee~~~~~~~~~~~gl~~i~l~~---p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~ 187 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVPDLP-PEEAEELKAVMKKYVLSFVPLGA---PTSTRKRIKLICEAADEMTYFVSVTGTTGARE 187 (262)
T ss_dssp HHHHHHHHHTTCCEEECTTCC-HHHHHHHHHHHHHTTCEECCEEC---TTCCHHHHHHHHHHCSSCEEEESSCC------
T ss_pred HHHHHHHHHcCCCEEEECCCC-HHHHHHHHHHHHHcCCcEEEEeC---CCCCHHHHHHHHHhCCCCEEEEecCCccCCCC
Confidence 345667889999999998664 47788888888777632233333 223446788888887665422 1 1112221
Q ss_pred CCCChH-HHHHHHHHHHHHc-CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 345 PLEQIP-TVQEIIIHVCRQL-NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 345 ~~e~v~-~~Qk~Ii~~c~~~-gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
+ .+ .-....++..+++ +.|+.+..- .-|.. ++.. +..|+|+++..
T Consensus 188 ~---~~~~~~~~~v~~vr~~~~~pv~vG~G---------I~t~e---~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 188 K---LPYERIKKKVEEYRELCDKPVVVGFG---------VSKKE---HARE-IGSFADGVVVG 234 (262)
T ss_dssp ------CHHHHHHHHHHHHHCCSCEEEESS---------CCSHH---HHHH-HHTTSSEEEEC
T ss_pred C---cCcccHHHHHHHHHhhcCCCEEEeCC---------CCCHH---HHHH-HHcCCCEEEEC
Confidence 1 11 1223444555554 789987542 33333 3344 67899999985
No 115
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=74.60 E-value=17 Score=34.92 Aligned_cols=104 Identities=14% Similarity=0.111 Sum_probs=66.9
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVDIPL 346 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e~~~ 346 (575)
.+.++.+++.|++.|=+.+ +++...+.++....+. .+..+-+-. .---+..+.-++. +|++..+--|
T Consensus 31 ~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~--~~~~vgagt--vi~~d~~~~A~~aGAd~v~~p~~d------- 98 (214)
T 1wbh_A 31 VPMAKALVAGGVRVLNVTL-RTECAVDAIRAIAKEV--PEAIVGAGT--VLNPQQLAEVTEAGAQFAISPGLT------- 98 (214)
T ss_dssp HHHHHHHHHTTCCEEEEES-CSTTHHHHHHHHHHHC--TTSEEEEES--CCSHHHHHHHHHHTCSCEEESSCC-------
T ss_pred HHHHHHHHHcCCCEEEEeC-CChhHHHHHHHHHHHC--cCCEEeeCE--EEEHHHHHHHHHcCCCEEEcCCCC-------
Confidence 4556778899999999996 4555555555444433 233433321 1111455555555 8999865222
Q ss_pred CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEe
Q 008172 347 EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALML 404 (575)
Q Consensus 347 e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmL 404 (575)
..+++.|+++|.|++.-+ -| .+++..|...|+|.+.+
T Consensus 99 -------~~v~~~~~~~g~~~i~G~-----------~t---~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 99 -------EPLLKAATEGTIPLIPGI-----------ST---VSELMLGMDYGLKEFKF 135 (214)
T ss_dssp -------HHHHHHHHHSSSCEEEEE-----------SS---HHHHHHHHHTTCCEEEE
T ss_pred -------HHHHHHHHHhCCCEEEec-----------CC---HHHHHHHHHCCCCEEEE
Confidence 368899999999998631 22 23457788999999999
No 116
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=74.60 E-value=53 Score=30.27 Aligned_cols=128 Identities=12% Similarity=0.041 Sum_probs=67.8
Q ss_pred HHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCC---CCCCCCCCCC
Q 008172 272 EFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARG---DLGVDIPLEQ 348 (575)
Q Consensus 272 ~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRG---DLg~e~~~e~ 348 (575)
+.+.+.|+|+|.++.-. .++.+++++. . ...+..-+.+.+-+... ...-+|.+++... .-... ..+.
T Consensus 80 ~~a~~~gad~v~l~~~~--~~~~~~~~~~--~---~~~~~v~~~t~~e~~~~--~~~g~d~i~~~~~~~~~~~~~-~~~~ 149 (215)
T 1xi3_A 80 DVALAVDADGVQLGPED--MPIEVAKEIA--P---NLIIGASVYSLEEALEA--EKKGADYLGAGSVFPTKTKED-ARVI 149 (215)
T ss_dssp HHHHHHTCSEEEECTTS--CCHHHHHHHC--T---TSEEEEEESSHHHHHHH--HHHTCSEEEEECSSCC----C-CCCC
T ss_pred HHHHHcCCCEEEECCcc--CCHHHHHHhC--C---CCEEEEecCCHHHHHHH--HhcCCCEEEEcCCccCCCCCC-CCCc
Confidence 45788999999887432 2244555443 2 23444445665443221 1223899998641 10000 0111
Q ss_pred hHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHH
Q 008172 349 IPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMAS 425 (575)
Q Consensus 349 v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~ 425 (575)
-...-++ .+.....|++++.- -+. .++..+...|+|++.++.--...+.|.+.++.+.+.+
T Consensus 150 ~~~~l~~---l~~~~~~pvia~GG----------I~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~ 210 (215)
T 1xi3_A 150 GLEGLRK---IVESVKIPVVAIGG----------INK---DNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIV 210 (215)
T ss_dssp HHHHHHH---HHHHCSSCEEEESS----------CCT---TTHHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHH
T ss_pred CHHHHHH---HHHhCCCCEEEECC----------cCH---HHHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHH
Confidence 1122222 23345889998642 222 2456666789999999764444456766766655443
No 117
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=74.24 E-value=16 Score=34.54 Aligned_cols=136 Identities=7% Similarity=0.027 Sum_probs=74.7
Q ss_pred HHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCce--EEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCCCCCCCh
Q 008172 272 EFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIK--VLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQI 349 (575)
Q Consensus 272 ~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~--IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e~~~e~v 349 (575)
+.+.+.|+|+|.+..--..+.++++.+.+++.| ..+. ++.-+- ....+.+.++ . .+.+...++-++.+.|....
T Consensus 74 ~~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g-~~~~~~ll~~~t-~~~~~~l~~~-~-~~~~vl~~a~~~~~~G~~g~ 149 (216)
T 1q6o_A 74 RMCFEANADWVTVICCADINTAKGALDVAKEFN-GDVQIELTGYWT-WEQAQQWRDA-G-IGQVVYHRSRDAQAAGVAWG 149 (216)
T ss_dssp HHHHHTTCSEEEEETTSCHHHHHHHHHHHHHTT-CEEEEEECSCCC-HHHHHHHHHT-T-CCEEEEECCHHHHHTTCCCC
T ss_pred HHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcC-CCceeeeeeCCC-hhhHHHHHhc-C-cHHHHHHHHHHHHhcCCCCC
Confidence 356789999999877666555888888887665 3321 220111 2344455443 2 44444544444555554432
Q ss_pred HHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHH
Q 008172 350 PTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMAS 425 (575)
Q Consensus 350 ~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~ 425 (575)
+.--+.+-+.+ ..+.|+++..-+ .|.. +..++..|+|.+....--.....|.++++.+++..
T Consensus 150 ~~~i~~lr~~~-~~~~~i~v~GGI--------~~~~-----~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i 211 (216)
T 1q6o_A 150 EADITAIKRLS-DMGFKVTVTGGL--------ALED-----LPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSI 211 (216)
T ss_dssp HHHHHHHHHHH-HTTCEEEEESSC--------CGGG-----GGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCcEEEECCc--------Chhh-----HHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHH
Confidence 22223333333 234556664221 2222 35567789999988643333346888888776543
No 118
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=74.05 E-value=17 Score=34.62 Aligned_cols=122 Identities=7% Similarity=0.104 Sum_probs=67.4
Q ss_pred cCHHHHHHHHHcCCCEEEecC--cCChhhHHHHHHHHhccCCCCceEEee-------ecCH-------HHHhcHHHHHhc
Q 008172 266 KDWDDIEFGIAEGVDFIAMSF--VCDADSVRHLKKYVSGKSSRSIKVLAK-------IENL-------ESLQKFEEIVEA 329 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~Sf--V~sa~dv~~ir~~l~~~~~~~i~IIaK-------IEt~-------~av~nldeI~~~ 329 (575)
.+.++++.+++.|+|.|.+.. ..+++.+.++.+.++.+ --+.+=++ +.+. ..++.++...+.
T Consensus 84 ~~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~--~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~ 161 (244)
T 2y88_A 84 RDDESLAAALATGCARVNVGTAALENPQWCARVIGEHGDQ--VAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSE 161 (244)
T ss_dssp CSHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHGGG--EEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCEEEECchHhhChHHHHHHHHHcCCC--EEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhC
Confidence 356778999999999998764 35555566666555321 00111111 2222 235555666666
Q ss_pred -CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHc---ccceEEec
Q 008172 330 -SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQ---YADALMLS 405 (575)
Q Consensus 330 -sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~---G~D~vmLs 405 (575)
+|.|++-..+..-...-..+..+ +++ +...+.|++...- .-+.+ |+..+... |+|++|+.
T Consensus 162 G~~~i~~~~~~~~~~~~g~~~~~~-~~l---~~~~~ipvia~GG---------I~~~~---d~~~~~~~~~~Gad~v~vG 225 (244)
T 2y88_A 162 GCSRFVVTDITKDGTLGGPNLDLL-AGV---ADRTDAPVIASGG---------VSSLD---DLRAIATLTHRGVEGAIVG 225 (244)
T ss_dssp TCCCEEEEETTTTTTTSCCCHHHH-HHH---HTTCSSCEEEESC---------CCSHH---HHHHHHTTGGGTEEEEEEC
T ss_pred CCCEEEEEecCCccccCCCCHHHH-HHH---HHhCCCCEEEECC---------CCCHH---HHHHHHhhccCCCCEEEEc
Confidence 89898854443322211232222 222 2345899997543 33333 44555555 99999996
No 119
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=73.67 E-value=23 Score=32.90 Aligned_cols=99 Identities=20% Similarity=0.240 Sum_probs=60.7
Q ss_pred HHHHHcCCCEEEecCcC-Ch-hhHHHHHHHHhccCCCCceEEe-eecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCCCCC
Q 008172 272 EFGIAEGVDFIAMSFVC-DA-DSVRHLKKYVSGKSSRSIKVLA-KIENLESLQKFEEIVEA-SDGIMVARGDLGVDIPLE 347 (575)
Q Consensus 272 ~~al~~gvd~I~~SfV~-sa-~dv~~ir~~l~~~~~~~i~IIa-KIEt~~av~nldeI~~~-sDgImIaRGDLg~e~~~e 347 (575)
+...+.|+++|-+.+-. .+ +.++++|+.+. ++..|-+ .+.+++- .++..+. +|+| ++++- +
T Consensus 29 ~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~----~~~~ig~~~v~~~~~---~~~a~~~Gad~i-v~~~~-----~-- 93 (205)
T 1wa3_A 29 LAVFEGGVHLIEITFTVPDADTVIKELSFLKE----KGAIIGAGTVTSVEQ---CRKAVESGAEFI-VSPHL-----D-- 93 (205)
T ss_dssp HHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH----TTCEEEEESCCSHHH---HHHHHHHTCSEE-ECSSC-----C--
T ss_pred HHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC----CCcEEEecccCCHHH---HHHHHHcCCCEE-EcCCC-----C--
Confidence 44567899999775422 22 23556666553 1233333 4455543 3333333 8999 77651 1
Q ss_pred ChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 348 QIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 348 ~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
..+++.|++.|+|++.- ..|.. ++..+...|+|.+.+.
T Consensus 94 ------~~~~~~~~~~g~~vi~g-----------~~t~~---e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 94 ------EEISQFCKEKGVFYMPG-----------VMTPT---ELVKAMKLGHTILKLF 131 (205)
T ss_dssp ------HHHHHHHHHHTCEEECE-----------ECSHH---HHHHHHHTTCCEEEET
T ss_pred ------HHHHHHHHHcCCcEECC-----------cCCHH---HHHHHHHcCCCEEEEc
Confidence 46889999999999852 12333 4677899999998764
No 120
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=73.07 E-value=19 Score=35.38 Aligned_cols=140 Identities=14% Similarity=0.090 Sum_probs=83.8
Q ss_pred CCCCccCH-HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhc-------HHHHHhc-CC
Q 008172 261 PTLSKKDW-DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQK-------FEEIVEA-SD 331 (575)
Q Consensus 261 p~lsekD~-~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~n-------ldeI~~~-sD 331 (575)
|.-|..|+ +.+..+.+.|++.|+++ +..+ ..++.+.... .+++-+-|=-+.|-.+ .++-++. +|
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v-~a~~~l~~~~--~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAd 103 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLT----PVYT-VKISGLAEKL--GVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGAT 103 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----HHHH-HHHHHHHHHH--TCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEc----hHHh-eeehHhCCCC--CceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCC
Confidence 55566665 34467888999999874 4455 5566664320 3566666633332222 2222222 67
Q ss_pred EEEE--eCCCCCCCCCCCChHHHHHHHHHHHHHcCCCE--EEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEecc
Q 008172 332 GIMV--ARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPV--IVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLSG 406 (575)
Q Consensus 332 gImI--aRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPv--ivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs~ 406 (575)
.|=+ ..|.| . +.+..-.+.+.++|...|+|+ |+.|-. +|..|+..... +...|+|.|=-|
T Consensus 104 EID~vinig~~---~--~~v~~ei~~v~~a~~~~g~~lKvIlEt~~---------L~~e~i~~a~ria~eaGADfVKTs- 168 (234)
T 1n7k_A 104 ELDVVPHLSLG---P--EAVYREVSGIVKLAKSYGAVVKVILEAPL---------WDDKTLSLLVDSSRRAGADIVKTS- 168 (234)
T ss_dssp EEEECCCGGGC---H--HHHHHHHHHHHHHHHHTTCEEEEECCGGG---------SCHHHHHHHHHHHHHTTCSEEESC-
T ss_pred EEEEeccchHH---H--HHHHHHHHHHHHHHhhcCCeEEEEEeccC---------CCHHHHHHHHHHHHHhCCCEEEeC-
Confidence 7643 22222 1 244444457788898889997 665543 35667666665 678899998655
Q ss_pred CcCCCCCH-----HHHHHH--HHHHH
Q 008172 407 ESAIGPFG-----QKAVSV--LQMAS 425 (575)
Q Consensus 407 ETa~G~yP-----veaV~~--m~~I~ 425 (575)
.|..| ++.|+. |++++
T Consensus 169 ---TG~~~~~gAt~~dv~l~~m~~~v 191 (234)
T 1n7k_A 169 ---TGVYTKGGDPVTVFRLASLAKPL 191 (234)
T ss_dssp ---CSSSCCCCSHHHHHHHHHHHGGG
T ss_pred ---CCCCCCCCCCHHHHHHHHHHHHH
Confidence 56555 788888 77554
No 121
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=72.98 E-value=21 Score=34.11 Aligned_cols=119 Identities=11% Similarity=0.158 Sum_probs=64.1
Q ss_pred cCHHHHHHHHHcCCCEEEecC--cCChhhHHHHHHHHhccCCCCceEEee-----ecCH-------HHHhcHHHHHhc-C
Q 008172 266 KDWDDIEFGIAEGVDFIAMSF--VCDADSVRHLKKYVSGKSSRSIKVLAK-----IENL-------ESLQKFEEIVEA-S 330 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~Sf--V~sa~dv~~ir~~l~~~~~~~i~IIaK-----IEt~-------~av~nldeI~~~-s 330 (575)
.+.++++.+++.|+|.|.+.. ..+++.+.++.+.++ ..+.+-.. ++.. ..++.+.+..+. +
T Consensus 85 ~~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g----~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~ 160 (244)
T 1vzw_A 85 RDDDTLAAALATGCTRVNLGTAALETPEWVAKVIAEHG----DKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGC 160 (244)
T ss_dssp CSHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHG----GGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCEEEECchHhhCHHHHHHHHHHcC----CcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCC
Confidence 356778999999999998763 344555555555443 22222111 2221 334445555666 8
Q ss_pred CEEEEeCC--CCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHc---ccceEEec
Q 008172 331 DGIMVARG--DLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQ---YADALMLS 405 (575)
Q Consensus 331 DgImIaRG--DLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~---G~D~vmLs 405 (575)
|.|++--. |.. ..+. .+. .-+++ +...+.|++...- .-+. .|+..+... |+|++|+.
T Consensus 161 ~~i~~~~~~~~~~-~~g~-~~~-~~~~i---~~~~~ipvia~GG---------I~~~---~d~~~~~~~~~~Gadgv~vG 222 (244)
T 1vzw_A 161 ARYVVTDIAKDGT-LQGP-NLE-LLKNV---CAATDRPVVASGG---------VSSL---DDLRAIAGLVPAGVEGAIVG 222 (244)
T ss_dssp CCEEEEEC--------CC-CHH-HHHHH---HHTCSSCEEEESC---------CCSH---HHHHHHHTTGGGTEEEEEEC
T ss_pred CEEEEeccCcccc-cCCC-CHH-HHHHH---HHhcCCCEEEECC---------CCCH---HHHHHHHhhccCCCceeeee
Confidence 88887421 111 1111 222 22222 3445899998543 3333 344555555 99999997
Q ss_pred c
Q 008172 406 G 406 (575)
Q Consensus 406 ~ 406 (575)
.
T Consensus 223 ~ 223 (244)
T 1vzw_A 223 K 223 (244)
T ss_dssp H
T ss_pred H
Confidence 3
No 122
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=72.94 E-value=10 Score=37.94 Aligned_cols=90 Identities=18% Similarity=0.306 Sum_probs=53.2
Q ss_pred HHHHHHHHHcCCCEE--EecC---------cCChh-----------hHHHHHHHHhccCCCCceEEeeec-CH---HHHh
Q 008172 268 WDDIEFGIAEGVDFI--AMSF---------VCDAD-----------SVRHLKKYVSGKSSRSIKVLAKIE-NL---ESLQ 321 (575)
Q Consensus 268 ~~di~~al~~gvd~I--~~Sf---------V~sa~-----------dv~~ir~~l~~~~~~~i~IIaKIE-t~---~av~ 321 (575)
.+.++...+.|+|+| .+|| ++.+. ++-++.+.+++.+ .++.++.+.. |+ -|++
T Consensus 35 ~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~-~~~Pivlm~Y~npv~~~g~e 113 (267)
T 3vnd_A 35 LKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQH-PDMPIGLLLYANLVFANGID 113 (267)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC-TTCCEEEEECHHHHHHHCHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-CCCCEEEEecCcHHHHhhHH
Confidence 345555667899984 5666 33322 2222222233332 3466777765 44 3556
Q ss_pred cH-HHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEE
Q 008172 322 KF-EEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVI 368 (575)
Q Consensus 322 nl-deI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvi 368 (575)
++ ++..+. +||+++. || |+++ ..+..+.|+++|...+
T Consensus 114 ~f~~~~~~aGvdgvii~--Dl----p~ee----~~~~~~~~~~~gl~~i 152 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIA--DV----PVEE----SAPFSKAAKAHGIAPI 152 (267)
T ss_dssp HHHHHHHHHTCCEEEET--TS----CGGG----CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEEEeC--CC----CHhh----HHHHHHHHHHcCCeEE
Confidence 55 444444 8999994 55 5544 4678889999997665
No 123
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=72.48 E-value=21 Score=36.05 Aligned_cols=97 Identities=19% Similarity=0.203 Sum_probs=60.8
Q ss_pred HHHHHHHHcCCCEEEe------cCcCChhhHHHHHHH-HhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAM------SFVCDADSVRHLKKY-VSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~------SfV~sa~dv~~ir~~-l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.++|.++.|+|+|++ ++--|.++=.++-+. .+..+ .++.||+-+= +.++++.....-+. +|++|+.+
T Consensus 36 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecC
Confidence 5567889999999986 344455555555444 33333 4688998884 47777777666665 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcC-CCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLN-KPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~g-KPviva 370 (575)
-...- .+.+.+...-+.|. .+.+ .|+++.
T Consensus 115 P~y~~-~s~~~l~~~f~~va---~a~~~lPiilY 144 (303)
T 2wkj_A 115 PFYYP-FSFEEHCDHYRAII---DSADGLPMVVY 144 (303)
T ss_dssp CCSSC-CCHHHHHHHHHHHH---HHHTTCCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHHH---HhCCCCCEEEE
Confidence 44321 12244444444444 4445 899974
No 124
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=72.40 E-value=41 Score=36.01 Aligned_cols=119 Identities=19% Similarity=0.259 Sum_probs=72.0
Q ss_pred HHHHHHHHHcCCCEEEecCc--CChhhHHHHHHHHhccCCCCceEEe-eecCHHHHhcHHHHHhcCCEEEEeCCCCCC--
Q 008172 268 WDDIEFGIAEGVDFIAMSFV--CDADSVRHLKKYVSGKSSRSIKVLA-KIENLESLQKFEEIVEASDGIMVARGDLGV-- 342 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV--~sa~dv~~ir~~l~~~~~~~i~IIa-KIEt~~av~nldeI~~~sDgImIaRGDLg~-- 342 (575)
.+.+.+.++.|+|.+.+.-. .+..-+..++. +... ..+.+|+ .+-++++...+- -+|+|.+|.|-=+.
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~-l~~~--~~vpvi~k~v~~~~~a~~l~----G~d~v~vg~g~g~~~~ 302 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKE-MRQK--VDADFIVGNIANPKAVDDLT----FADAVKVGIGPGSICT 302 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHH-HHHT--CCSEEEEEEECCHHHHTTCT----TSSEEEECSSCSTTBC
T ss_pred HHHHHHHHHhcCCceEEEecCCcEeehhhHHHH-HHHH--hCCccccCCcCCHHHHHHhh----CCCeEEEeeeecccee
Confidence 66678888999998876532 12223333333 3222 1355665 467777665544 68999996543111
Q ss_pred -----CCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEecc
Q 008172 343 -----DIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 343 -----e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ 406 (575)
..+.+.+ ..-..+.+.+.+.+.|||.+.-+- --.|++.|+..|||++|+..
T Consensus 303 ~r~~~~~g~~~~-~~l~~~~~~~~~~~vpVia~GGi~------------~~~di~kalalGA~~v~~g~ 358 (486)
T 2cu0_A 303 TRIVAGVGVPQI-TAVAMVADRAQEYGLYVIADGGIR------------YSGDIVKAIAAGADAVMLGN 358 (486)
T ss_dssp HHHHTCCCCCHH-HHHHHHHHHHHHHTCEEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred eeEEeecCcchH-HHHHHHHHHHHHcCCcEEecCCCC------------CHHHHHHHHHcCCCceeeCh
Confidence 1122222 222344455566689999865443 24688999999999999964
No 125
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=72.10 E-value=17 Score=36.13 Aligned_cols=117 Identities=14% Similarity=0.209 Sum_probs=76.5
Q ss_pred HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEE--EEeCCCCCCCCCC
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGI--MVARGDLGVDIPL 346 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgI--mIaRGDLg~e~~~ 346 (575)
+-++.+.+.|+|++++|-. -.++..++++.+++.|.+.+.+++-- ...+.+.+|.+.++|. ++.+ .| -.|.
T Consensus 107 ~F~~~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~Gl~~I~lvaP~---t~~eRi~~ia~~a~gFiY~Vs~--~G-vTG~ 179 (252)
T 3tha_A 107 KFVKKAKSLGICALIVPEL-SFEESDDLIKECERYNIALITLVSVT---TPKERVKKLVKHAKGFIYLLAS--IG-ITGT 179 (252)
T ss_dssp HHHHHHHHTTEEEEECTTC-CGGGCHHHHHHHHHTTCEECEEEETT---SCHHHHHHHHTTCCSCEEEECC--SC-SSSC
T ss_pred HHHHHHHHcCCCEEEeCCC-CHHHHHHHHHHHHHcCCeEEEEeCCC---CcHHHHHHHHHhCCCeEEEEec--CC-CCCc
Confidence 3456788999999999998 56778899999988774444444322 2257889999998777 4432 01 1222
Q ss_pred C-ChHHHHHHHHHHHHHc-CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 347 E-QIPTVQEIIIHVCRQL-NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 347 e-~v~~~Qk~Ii~~c~~~-gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
. .++.-.+..+++.+++ ..|+++.. ..-|++.+. .+..++|++...
T Consensus 180 ~~~~~~~~~~~v~~vr~~~~~Pv~vGf---------GIst~e~a~----~~~~~ADGVIVG 227 (252)
T 3tha_A 180 KSVEEAILQDKVKEIRSFTNLPIFVGF---------GIQNNQDVK----RMRKVADGVIVG 227 (252)
T ss_dssp SHHHHHHHHHHHHHHHTTCCSCEEEES---------SCCSHHHHH----HHTTTSSEEEEC
T ss_pred ccCCCHHHHHHHHHHHHhcCCcEEEEc---------CcCCHHHHH----HHHhcCCEEEEC
Confidence 2 2333456777777775 67999864 344554433 335679999875
No 126
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=71.67 E-value=23 Score=34.95 Aligned_cols=119 Identities=17% Similarity=0.102 Sum_probs=75.5
Q ss_pred CccCH-HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHH----------hcHHHHHhc-CC
Q 008172 264 SKKDW-DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESL----------QKFEEIVEA-SD 331 (575)
Q Consensus 264 sekD~-~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av----------~nldeI~~~-sD 331 (575)
+..|+ +.+..+++.|++.|+++ +--+.... + .++.++.|+.+-.++ ...++.++. +|
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~----~~~v~~~~--~-----~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~ 107 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ----RGIAEKYY--D-----GSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGAS 107 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC----HHHHHHHC--C-----SSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCS
T ss_pred chhhHHHHHHHHHhhCCCEEEEC----HHHHHHhh--c-----CCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCC
Confidence 45665 45567899999999987 23333332 1 235677777655444 345666666 78
Q ss_pred EEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCC---------ChhhHhhH-HHHHHcccce
Q 008172 332 GIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTP---------TRAEVADV-SEAVRQYADA 401 (575)
Q Consensus 332 gImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~P---------trAEv~Dv-~nav~~G~D~ 401 (575)
+|-+ |-.++ +-....+...-+++.+.|+++|.|+|+= ..| +..++... --+...|+|.
T Consensus 108 ~v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~----------~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~ 175 (263)
T 1w8s_A 108 AVGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVE----------SFPRGGKVVNETAPEIVAYAARIALELGADA 175 (263)
T ss_dssp EEEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEE----------ECCCSTTCCCTTCHHHHHHHHHHHHHHTCSE
T ss_pred EEEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEE----------eeCCCCccccCCCHHHHHHHHHHHHHcCCCE
Confidence 8755 34444 1122344455568889999999999862 123 55566554 3478899999
Q ss_pred EEec
Q 008172 402 LMLS 405 (575)
Q Consensus 402 vmLs 405 (575)
+=.+
T Consensus 176 vkt~ 179 (263)
T 1w8s_A 176 MKIK 179 (263)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 8887
No 127
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=71.47 E-value=53 Score=32.84 Aligned_cols=127 Identities=11% Similarity=0.168 Sum_probs=83.5
Q ss_pred HHHHHHHHcCCCEEEecCcC-----------ChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAMSFVC-----------DADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~-----------sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaR 337 (575)
+.++.+.+.|+|.+-.-+-. ..+..+.+++++.+.| +.+++-+-+.+.++-+.+. +|.+-||-
T Consensus 56 ~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~G---l~~~te~~d~~~~~~l~~~---vd~~kIgs 129 (276)
T 1vs1_A 56 EAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAG---LPVVTEVLDPRHVETVSRY---ADMLQIGA 129 (276)
T ss_dssp HHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT---CCEEEECCCGGGHHHHHHH---CSEEEECG
T ss_pred HHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcC---CcEEEecCCHHHHHHHHHh---CCeEEECc
Confidence 34455567788876432111 1577888889888776 7899999888888777664 79999986
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHH-cccceEEec--cCcCCCCCH
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVR-QYADALMLS--GESAIGPFG 414 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~-~G~D~vmLs--~ETa~G~yP 414 (575)
+++ .+. .+++.+-+.||||++.|.|- .|..|+...++++. .|.+-++|. |=+..-.||
T Consensus 130 ~~~------~n~-----~ll~~~a~~~kPV~lk~G~~--------~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~ 190 (276)
T 1vs1_A 130 RNM------QNF-----PLLREVGRSGKPVLLKRGFG--------NTVEELLAAAEYILLEGNWQVVLVERGIRTFEPST 190 (276)
T ss_dssp GGT------TCH-----HHHHHHHHHTCCEEEECCTT--------CCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSS
T ss_pred ccc------cCH-----HHHHHHHccCCeEEEcCCCC--------CCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcC
Confidence 665 332 34555667899999976543 57788887777654 466444442 333333567
Q ss_pred HHHHHH
Q 008172 415 QKAVSV 420 (575)
Q Consensus 415 veaV~~ 420 (575)
.+.+.+
T Consensus 191 ~~~vdl 196 (276)
T 1vs1_A 191 RFTLDV 196 (276)
T ss_dssp SSBCBH
T ss_pred cchhCH
Confidence 666553
No 128
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=71.29 E-value=24 Score=36.48 Aligned_cols=132 Identities=16% Similarity=0.125 Sum_probs=69.4
Q ss_pred CCCccCHHHH--------HHHHHcCCCEEEecC-------------cCChh------------hHHHHHHHHhccCCCCc
Q 008172 262 TLSKKDWDDI--------EFGIAEGVDFIAMSF-------------VCDAD------------SVRHLKKYVSGKSSRSI 308 (575)
Q Consensus 262 ~lsekD~~di--------~~al~~gvd~I~~Sf-------------V~sa~------------dv~~ir~~l~~~~~~~i 308 (575)
.||+.|++.+ +.|.+.|+|+|=+-. .+... -+.++.+.+.+.-+++.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 5788887766 467889999987643 22221 13334444443322456
Q ss_pred eEEeeecC---H----HHHhcHHHHHhc-----CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHH-HcCCCEEEehhhHH
Q 008172 309 KVLAKIEN---L----ESLQKFEEIVEA-----SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCR-QLNKPVIVASQLLE 375 (575)
Q Consensus 309 ~IIaKIEt---~----~av~nldeI~~~-----sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~-~~gKPvivaTq~Le 375 (575)
.|..||-- . ..+++.-++++. +|.|-+.-|...-....+.-+..+...++..+ ..+.||+....+
T Consensus 227 pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI-- 304 (363)
T 3l5l_A 227 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGF-- 304 (363)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSST--
T ss_pred eEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCC--
Confidence 68888821 1 123333333332 79998876644322111000111222333322 348999975432
Q ss_pred hhhcCCCCChhhHhhHHHHHHcc-cceEEec
Q 008172 376 SMVEYPTPTRAEVADVSEAVRQY-ADALMLS 405 (575)
Q Consensus 376 SM~~~p~PtrAEv~Dv~nav~~G-~D~vmLs 405 (575)
-|.+ +...++..| +|.|++.
T Consensus 305 -------~s~e---~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 305 -------GTPQ---LAEAALQANQLDLVSVG 325 (363)
T ss_dssp -------TSHH---HHHHHHHTTSCSEEECC
T ss_pred -------CCHH---HHHHHHHCCCccEEEec
Confidence 1222 335677788 9999986
No 129
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=71.27 E-value=35 Score=31.79 Aligned_cols=101 Identities=13% Similarity=0.156 Sum_probs=63.6
Q ss_pred HHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEE--eeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCCCC
Q 008172 270 DIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVL--AKIENLESLQKFEEIVEA-SDGIMVARGDLGVDIPL 346 (575)
Q Consensus 270 di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~II--aKIEt~~av~nldeI~~~-sDgImIaRGDLg~e~~~ 346 (575)
.++.+.+.|+++|-+- ..+++.++.++++.+..+ .+ .++ ..+.+. +.++..++. +|+|.++-
T Consensus 24 ~~~~~~~~G~~~i~l~-~~~~~~~~~i~~i~~~~~-~~-l~vg~g~~~~~---~~i~~a~~~Gad~V~~~~--------- 88 (212)
T 2v82_A 24 HVGAVIDAGFDAVEIP-LNSPQWEQSIPAIVDAYG-DK-ALIGAGTVLKP---EQVDALARMGCQLIVTPN--------- 88 (212)
T ss_dssp HHHHHHHHTCCEEEEE-TTSTTHHHHHHHHHHHHT-TT-SEEEEECCCSH---HHHHHHHHTTCCEEECSS---------
T ss_pred HHHHHHHCCCCEEEEe-CCChhHHHHHHHHHHhCC-CC-eEEEeccccCH---HHHHHHHHcCCCEEEeCC---------
Confidence 3456678899999874 345666677776655433 22 233 334444 356666666 89997431
Q ss_pred CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEe
Q 008172 347 EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALML 404 (575)
Q Consensus 347 e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmL 404 (575)
.. ..+++.+++.|.++++.. .|..|+ ..+...|+|.+.+
T Consensus 89 ~~-----~~~~~~~~~~g~~~~~g~-----------~t~~e~---~~a~~~G~d~v~v 127 (212)
T 2v82_A 89 IH-----SEVIRRAVGYGMTVCPGC-----------ATATEA---FTALEAGAQALKI 127 (212)
T ss_dssp CC-----HHHHHHHHHTTCEEECEE-----------CSHHHH---HHHHHTTCSEEEE
T ss_pred CC-----HHHHHHHHHcCCCEEeec-----------CCHHHH---HHHHHCCCCEEEE
Confidence 11 346788899999877541 244443 5667899999987
No 130
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=71.26 E-value=20 Score=35.90 Aligned_cols=97 Identities=15% Similarity=0.168 Sum_probs=60.0
Q ss_pred HHHHHHHHcCCCEEEec------CcCChhhHHHHHHH-HhccCCCCceEEeee---cCHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAMS------FVCDADSVRHLKKY-VSGKSSRSIKVLAKI---ENLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S------fV~sa~dv~~ir~~-l~~~~~~~i~IIaKI---Et~~av~nldeI~~~-sDgImIaR 337 (575)
+.++|.++.|+|+|++. +-=|.++=.++-+. ++..+ .++.||+-+ -+.++++......+. +|++|+-+
T Consensus 27 ~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 105 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVD-KRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLIT 105 (292)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhC-CCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECC
Confidence 45568889999999764 33344444444443 33333 468899888 466677666666665 89999976
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+...-+.|.+ +.+.|+++.
T Consensus 106 P~y~~-~~~~~l~~~f~~ia~---a~~lPiilY 134 (292)
T 3daq_A 106 PYYNK-TNQRGLVKHFEAIAD---AVKLPVVLY 134 (292)
T ss_dssp CCSSC-CCHHHHHHHHHHHHH---HHCSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHHHH---hCCCCEEEE
Confidence 54321 122344444445544 448999985
No 131
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=70.73 E-value=26 Score=35.50 Aligned_cols=153 Identities=14% Similarity=0.152 Sum_probs=82.7
Q ss_pred HHhcHHHHHh----cCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHH--HcCCCEEEehhhHHhhhcCCCCCh-hhHhhH
Q 008172 319 SLQKFEEIVE----ASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCR--QLNKPVIVASQLLESMVEYPTPTR-AEVADV 391 (575)
Q Consensus 319 av~nldeI~~----~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~--~~gKPvivaTq~LeSM~~~p~Ptr-AEv~Dv 391 (575)
+++++++.+. -+|+|++-+|=+ +.+. ..++|+|+-..-=+|+- |.|.+ .-..++
T Consensus 71 gl~~~~~~i~~l~~g~dav~~~~G~~-----------------~~~~~~~~~~~lil~l~~~t~~~--~~~~~~~l~~~v 131 (295)
T 3glc_A 71 GLERIDINIAPLFEHADVLMCTRGIL-----------------RSVVPPATNRPVVLRASGANSIL--AELSNEAVALSM 131 (295)
T ss_dssp TCTTHHHHTGGGGGGCSEEEECHHHH-----------------HHHSCGGGCCCEEEECEECCCTT--SCTTCCEECSCH
T ss_pred chhhhHHHHHHhhcCCCEEEECHhHH-----------------hhhccccCCccEEEEEcCCCcCC--CCCccchhHHHH
Confidence 4555554433 389999965533 2221 23788887543322332 22333 334678
Q ss_pred HHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcC
Q 008172 392 SEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLG 471 (575)
Q Consensus 392 ~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~ 471 (575)
..|+..|+|+|-+.-=.. ..+.-+.++.+..+.++++.|-.. .+ -.......... ...+...++++|.+++
T Consensus 132 e~Av~~GAdaV~~~i~~G-s~~~~~~l~~i~~v~~~a~~~Glp-----vI-ie~~~G~~~~~--d~e~i~~aariA~elG 202 (295)
T 3glc_A 132 DDAVRLNSCAVAAQVYIG-SEYEHQSIKNIIQLVDAGMKVGMP-----TM-AVTGVGKDMVR--DQRYFSLATRIAAEMG 202 (295)
T ss_dssp HHHHHTTCSEEEEEECTT-STTHHHHHHHHHHHHHHHHTTTCC-----EE-EEECC----CC--SHHHHHHHHHHHHHTT
T ss_pred HHHHHCCCCEEEEEEECC-CCcHHHHHHHHHHHHHHHHHcCCE-----EE-EECCCCCccCC--CHHHHHHHHHHHHHhC
Confidence 889999999998853322 334556777777777777654100 01 00000000011 1233345778999999
Q ss_pred CcEEEEEcCChhHHHHHhccCCCCcEEEEc
Q 008172 472 VDAIFVYTKHGHMASLLSRNRPNPPIFAFT 501 (575)
Q Consensus 472 AkaIVVfT~SG~TAr~VSr~RP~~PIiAvT 501 (575)
|+. |-.+.+|.+-+.+...- .+||++.-
T Consensus 203 AD~-VKt~~t~e~~~~vv~~~-~vPVv~~G 230 (295)
T 3glc_A 203 AQI-IKTYYVEKGFERIVAGC-PVPIVIAG 230 (295)
T ss_dssp CSE-EEEECCTTTHHHHHHTC-SSCEEEEC
T ss_pred CCE-EEeCCCHHHHHHHHHhC-CCcEEEEE
Confidence 994 55455654445554433 37888764
No 132
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=70.02 E-value=59 Score=30.38 Aligned_cols=127 Identities=12% Similarity=0.105 Sum_probs=66.2
Q ss_pred HHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHh-cCCEEEEeCC---CCCCC-CCC
Q 008172 272 EFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVE-ASDGIMVARG---DLGVD-IPL 346 (575)
Q Consensus 272 ~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~-~sDgImIaRG---DLg~e-~~~ 346 (575)
+.+.+.|+|+|.++... .++.++++.+ + . ..+-.-..+.+- +.+..+ -+|++++++- .-.-. ...
T Consensus 88 ~~a~~~gad~v~l~~~~--~~~~~~~~~~---g-~-~~~~~s~~t~~e---~~~a~~~g~d~v~~~~v~~t~~~~~~~~~ 157 (227)
T 2tps_A 88 ELALNLKADGIHIGQED--ANAKEVRAAI---G-D-MILGVSAHTMSE---VKQAEEDGADYVGLGPIYPTETKKDTRAV 157 (227)
T ss_dssp HHHHHHTCSEEEECTTS--SCHHHHHHHH---T-T-SEEEEEECSHHH---HHHHHHHTCSEEEECCSSCCCSSSSCCCC
T ss_pred HHHHHcCCCEEEECCCc--cCHHHHHHhc---C-C-cEEEEecCCHHH---HHHHHhCCCCEEEECCCcCCCCCCCCCCc
Confidence 45788899999886533 3466666544 2 2 222222345432 222222 2899998531 11111 011
Q ss_pred CChHHHHHHHHHHHHHcC-CCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHH
Q 008172 347 EQIPTVQEIIIHVCRQLN-KPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMAS 425 (575)
Q Consensus 347 e~v~~~Qk~Ii~~c~~~g-KPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~ 425 (575)
.....+ ++ .+.... .|++.+.- -+. .++..+...|+|++.++.--...+.|.+.++.+.+.+
T Consensus 158 ~~~~~l-~~---~~~~~~~~pvia~GG----------I~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~ 220 (227)
T 2tps_A 158 QGVSLI-EA---VRRQGISIPIVGIGG----------ITI---DNAAPVIQAGADGVSMISAISQAEDPESAARKFREEI 220 (227)
T ss_dssp CTTHHH-HH---HHHTTCCCCEEEESS----------CCT---TTSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred cCHHHH-HH---HHHhCCCCCEEEEcC----------CCH---HHHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHHHH
Confidence 111111 22 233345 89998643 222 2345556679999999865444467777766555443
No 133
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=69.16 E-value=23 Score=35.46 Aligned_cols=97 Identities=21% Similarity=0.262 Sum_probs=60.0
Q ss_pred HHHHHHHHcCCCEEEe------cCcCChhhHHHHHHH-HhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAM------SFVCDADSVRHLKKY-VSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~------SfV~sa~dv~~ir~~-l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.++|.++.|+|+|++ ++--|.++=.++-+. .+..+ .++.||+-+= +.++++....-.+. +|++|+-+
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAA-GRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVV 103 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 5567888999999986 334455555554444 33333 4688988884 47777766666665 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+...-+ +.|.+.+.|+++-
T Consensus 104 P~y~~-~s~~~l~~~f~---~va~a~~lPiilY 132 (294)
T 2ehh_A 104 PYYNK-PTQRGLYEHFK---TVAQEVDIPIIIY 132 (294)
T ss_dssp CCSSC-CCHHHHHHHHH---HHHHHCCSCEEEE
T ss_pred CCCCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 54321 12233333333 4455668999975
No 134
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=68.80 E-value=25 Score=35.17 Aligned_cols=97 Identities=14% Similarity=0.165 Sum_probs=59.9
Q ss_pred HHHHHHHHcCCCEEEec------CcCChhhHHHHHHH-HhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAMS------FVCDADSVRHLKKY-VSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S------fV~sa~dv~~ir~~-l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.++|.++.|+|+|++. +--|.++=.++-+. .+..+ .++.||+-+= +.++++.....-+. +|++|+.+
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 103 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVN-GRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSIT 103 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 45578889999998763 33455555554443 33333 4688998884 47777766666665 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 104 P~y~~-~s~~~l~~~f~~i---a~a~~lPiilY 132 (289)
T 2yxg_A 104 PYYNK-PTQEGLRKHFGKV---AESINLPIVLY 132 (289)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 54321 1223333333444 55568999974
No 135
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=68.57 E-value=21 Score=35.99 Aligned_cols=97 Identities=16% Similarity=0.162 Sum_probs=60.1
Q ss_pred HHHHHHHHcCCCEEEe------cCcCChhhHHHHHHH-HhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAM------SFVCDADSVRHLKKY-VSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~------SfV~sa~dv~~ir~~-l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.++|.++.|+|+|++ ++.-|.++=.++-+. .+..+ .++.||+-+= +.++++.....-+. +|++|+.+
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVD-KRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 4556888999999986 334455555555443 33333 4688988884 47777777766666 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+...-+ +.|.+.+.|+++.
T Consensus 116 P~y~~-~s~~~l~~~f~---~va~a~~lPiilY 144 (301)
T 1xky_A 116 PYYNK-PSQEGMYQHFK---AIAESTPLPVMLY 144 (301)
T ss_dssp CCSSC-CCHHHHHHHHH---HHHHTCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 54321 12233333333 3455568999975
No 136
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=68.47 E-value=29 Score=32.95 Aligned_cols=112 Identities=19% Similarity=0.194 Sum_probs=67.2
Q ss_pred HHHHHHHHHcCCCEEEec-----CcCC----hhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeC
Q 008172 268 WDDIEFGIAEGVDFIAMS-----FVCD----ADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~S-----fV~s----a~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaR 337 (575)
.++++.+.+.|+|+|-+- |+.+ .+.++++++.+ + ..+.+-.++.+++ +.++...+. +|++.+.-
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~---~-~~~~v~l~vnd~~--~~v~~~~~~Gad~v~vh~ 99 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT---D-LPLDVHLMIVEPD--QRVPDFIKAGADIVSVHC 99 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC---C-SCEEEEEESSSHH--HHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc---C-CcEEEEEEecCHH--HHHHHHHHcCCCEEEEEe
Confidence 456677888999998773 5554 34555554432 2 2456777888744 456666666 89998862
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
. .+ +.+. -+..++.++++|+.++++.. |. |..|. ..++..++|.+++.
T Consensus 100 ~-~~---~~~~----~~~~~~~~~~~g~~ig~~~~--------p~-t~~e~---~~~~~~~~d~vl~~ 147 (230)
T 1rpx_A 100 E-QS---STIH----LHRTINQIKSLGAKAGVVLN--------PG-TPLTA---IEYVLDAVDLVLIM 147 (230)
T ss_dssp S-TT---TCSC----HHHHHHHHHHTTSEEEEEEC--------TT-CCGGG---GTTTTTTCSEEEEE
T ss_pred c-Cc---cchh----HHHHHHHHHHcCCcEEEEeC--------CC-CCHHH---HHHHHhhCCEEEEE
Confidence 1 00 1122 24677888888999988741 11 11121 23445789988554
No 137
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=68.08 E-value=1e+02 Score=30.73 Aligned_cols=125 Identities=18% Similarity=0.175 Sum_probs=75.1
Q ss_pred HHHHHHHHHcCCCEE-Eec-------------CcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCE
Q 008172 268 WDDIEFGIAEGVDFI-AMS-------------FVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDG 332 (575)
Q Consensus 268 ~~di~~al~~gvd~I-~~S-------------fV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDg 332 (575)
.+.++.+.+.|+|+| .+- ..++++.++++++.. ++.++.|+=.- .++..+...+. +|+
T Consensus 31 ~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~------~iPv~~k~r~g-~~~~~~~~~a~GAd~ 103 (305)
T 2nv1_A 31 AEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAV------SIPVMAKARIG-HIVEARVLEAMGVDY 103 (305)
T ss_dssp HHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHC------SSCEEEEECTT-CHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhC------CCCEEeccccc-chHHHHHHHHCCCCE
Confidence 356677889999999 542 233566666665432 35677776331 02233333344 899
Q ss_pred EEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCC
Q 008172 333 IMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGP 412 (575)
Q Consensus 333 ImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~ 412 (575)
|. +-.+|. .+++ +++++ ++..|.|+++... + ..+...++..|+|.|.++||+..|
T Consensus 104 V~-~~~~l~----~~~~----~~~i~-~~~~g~~v~~~~~-----------~---~~e~~~a~~~Gad~V~~~G~~g~g- 158 (305)
T 2nv1_A 104 ID-ESEVLT----PADE----EFHLN-KNEYTVPFVCGCR-----------D---LGEATRRIAEGASMLRTKGEPGTG- 158 (305)
T ss_dssp EE-ECTTSC----CSCS----SCCCC-GGGCSSCEEEEES-----------S---HHHHHHHHHTTCSEEEECCCTTSC-
T ss_pred EE-EeccCC----HHHH----HHHHH-HhccCCcEEEEeC-----------C---HHHHHHHHHCCCCEEEeccccCcc-
Confidence 96 444442 2221 12223 5667999998542 2 224566678999999999998777
Q ss_pred CHHHHHHHHHHH
Q 008172 413 FGQKAVSVLQMA 424 (575)
Q Consensus 413 yPveaV~~m~~I 424 (575)
-..+++...+.+
T Consensus 159 ~~~~~~~h~rt~ 170 (305)
T 2nv1_A 159 NIVEAVRHMRKV 170 (305)
T ss_dssp CTHHHHHHHHHH
T ss_pred chHHHHhhhhhh
Confidence 455666665543
No 138
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=68.04 E-value=23 Score=36.23 Aligned_cols=97 Identities=13% Similarity=0.060 Sum_probs=60.4
Q ss_pred HHHHHHHHcCCCEEEe------cCcCChhhHHHHHHH-HhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAM------SFVCDADSVRHLKKY-VSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~------SfV~sa~dv~~ir~~-l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.++|.++.|+|+|++ ++--|.++=.++-+. .+..+ .++.||+-+= +.++++......+. +||+|+.+
T Consensus 59 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 137 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILR-GRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAP 137 (332)
T ss_dssp HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 5567888999999976 334455555555443 33333 4688988874 47777766666665 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 138 P~Y~~-~s~~~l~~~f~~V---A~a~~lPiilY 166 (332)
T 2r8w_A 138 VSYTP-LTQEEAYHHFAAV---AGATALPLAIY 166 (332)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 54321 1223333333444 45568999974
No 139
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=67.98 E-value=16 Score=37.09 Aligned_cols=98 Identities=15% Similarity=0.208 Sum_probs=59.4
Q ss_pred HHHHHHHHcCCCEEEec------CcCChhhHHHHHHH-HhccCCCCceEEeee---cCHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAMS------FVCDADSVRHLKKY-VSGKSSRSIKVLAKI---ENLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S------fV~sa~dv~~ir~~-l~~~~~~~i~IIaKI---Et~~av~nldeI~~~-sDgImIaR 337 (575)
+.+++.++.|+|+|++. +-=|.++=.++-+. ++..+ .++.||+-+ -+.++++....-.+. +||+|+-+
T Consensus 33 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 111 (309)
T 3fkr_A 33 RAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVA-GRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMP 111 (309)
T ss_dssp HHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcC
Confidence 45568889999998873 23344444444443 33333 468888876 456677666666555 89999976
Q ss_pred CCCC--CCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLG--VDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg--~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-... ...+.+.+...-+.| +.+.+.|+++-
T Consensus 112 Pyy~~~~~~s~~~l~~~f~~v---a~a~~lPiilY 143 (309)
T 3fkr_A 112 PYHGATFRVPEAQIFEFYARV---SDAIAIPIMVQ 143 (309)
T ss_dssp SCBTTTBCCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCccCCCCCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 5432 122233444444444 44568999875
No 140
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=67.36 E-value=3.5 Score=40.41 Aligned_cols=144 Identities=11% Similarity=-0.003 Sum_probs=84.7
Q ss_pred CCCCccCH-HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHh-------cHHHHHhc-CC
Q 008172 261 PTLSKKDW-DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQ-------KFEEIVEA-SD 331 (575)
Q Consensus 261 p~lsekD~-~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~-------nldeI~~~-sD 331 (575)
|..|+.|+ +.++.|.+.|++.|+++ +..+..+++.+. . +++.+-|=-|.|-. -.++ ++. +|
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~~a~~~l~----g-v~v~tvigFP~G~~~~~~k~~E~~~-i~~GAd 81 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCVN----PIYAPVVRPLLR----K-VKLCVVADFPFGALPTASRIALVSR-LAEVAD 81 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHGGGCS----S-SEEEEEESTTTCCSCHHHHHHHHHH-HTTTCS
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC----C-CeEEEEeCCCCCCCchHHHHHHHHH-HHCCCC
Confidence 56677775 44467889999999875 445666666553 2 67776664433322 2334 333 66
Q ss_pred EEEEeCCCCCCCCC---C---CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEe
Q 008172 332 GIMVARGDLGVDIP---L---EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALML 404 (575)
Q Consensus 332 gImIaRGDLg~e~~---~---e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmL 404 (575)
.|-+ -+.++ - +.+..-.+.+.++|...+.|||+.|-.| |..|+..... ++..|+|.|=-
T Consensus 82 EID~-----Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~L---------t~eei~~a~~ia~eaGADfVKT 147 (226)
T 1vcv_A 82 EIDV-----VAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYL---------RDEERYTLYDIIAEAGAHFIKS 147 (226)
T ss_dssp EEEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---------CHHHHHHHHHHHHHHTCSEEEC
T ss_pred EEEE-----ecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCC---------CHHHHHHHHHHHHHcCCCEEEe
Confidence 6532 12222 1 2333333455556655566788877655 5677666655 67889999976
Q ss_pred ccCcC----------CCCCHHHHHHHHHHHHHHH
Q 008172 405 SGESA----------IGPFGQKAVSVLQMASSRM 428 (575)
Q Consensus 405 s~ETa----------~G~yPveaV~~m~~I~~~a 428 (575)
|.=-. .|.--+|.|+.|++.++.+
T Consensus 148 STGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~ 181 (226)
T 1vcv_A 148 STGFAEEAYAARQGNPVHSTPERAAAIARYIKEK 181 (226)
T ss_dssp CCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHH
T ss_pred CCCCCccccccccCCCCCCCHHHHHHHHHHHHHh
Confidence 62111 1223367889998876544
No 141
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=67.35 E-value=21 Score=35.95 Aligned_cols=97 Identities=14% Similarity=0.189 Sum_probs=59.8
Q ss_pred HHHHHHHHcCCCEEEe------cCcCChhhHHHHHHH-HhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAM------SFVCDADSVRHLKKY-VSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~------SfV~sa~dv~~ir~~-l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.++|.++.|+|+|++ ++.-|.++=.++-+. .+..+ .++.||+-+= +.++++......+. +|++|+.+
T Consensus 25 ~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (297)
T 2rfg_A 25 GLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQ-GRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVA 103 (297)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 5557888999999976 334455555555443 33333 4678888884 37777777666665 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+...-+ +.|.+.+.|+++.
T Consensus 104 P~y~~-~s~~~l~~~f~---~va~a~~lPiilY 132 (297)
T 2rfg_A 104 GYYNR-PSQEGLYQHFK---MVHDAIDIPIIVY 132 (297)
T ss_dssp CTTTC-CCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 44321 12233333333 3455568999874
No 142
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=67.24 E-value=36 Score=33.98 Aligned_cols=97 Identities=14% Similarity=0.135 Sum_probs=60.4
Q ss_pred HHHHHHHH-cCCCEEEe------cCcCChhhHHHHHHHH-hccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEe
Q 008172 269 DDIEFGIA-EGVDFIAM------SFVCDADSVRHLKKYV-SGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVA 336 (575)
Q Consensus 269 ~di~~al~-~gvd~I~~------SfV~sa~dv~~ir~~l-~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIa 336 (575)
+.++|.++ .|+|+|++ ++--|.++=.++-+.. +..+ .++.||+-+= +.++++.....-+. +|++|+.
T Consensus 28 ~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 106 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAK-DQIALIAQVGSVNLKEAVELGKYATELGYDCLSAV 106 (293)
T ss_dssp HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 55678899 99999986 3445555555554443 3333 4688998884 47777766666665 8999997
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 337 RGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 337 RGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
+-...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 107 ~P~y~~-~~~~~l~~~f~~v---a~a~~lPiilY 136 (293)
T 1f6k_A 107 TPFYYK-FSFPEIKHYYDTI---IAETGSNMIVY 136 (293)
T ss_dssp CCCSSC-CCHHHHHHHHHHH---HHHHCCCEEEE
T ss_pred CCCCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 544311 1123333333444 44557899975
No 143
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=67.17 E-value=45 Score=34.65 Aligned_cols=111 Identities=16% Similarity=0.203 Sum_probs=76.3
Q ss_pred HHHHHHHHcCCCEEEecCcC-----------ChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAMSFVC-----------DADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~-----------sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaR 337 (575)
+.++.+.+.|+|++-.-+-. ..+..+.++++..+.| +.+++-+-+.+.++-+.+. +|.+-||-
T Consensus 124 ~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~G---l~~~te~~d~~~~~~l~~~---vd~lkIgA 197 (350)
T 1vr6_A 124 ETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYG---MYVVTEALGEDDLPKVAEY---ADIIQIGA 197 (350)
T ss_dssp HHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHT---CEEEEECSSGGGHHHHHHH---CSEEEECG
T ss_pred HHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcC---CcEEEEeCCHHHHHHHHHh---CCEEEECc
Confidence 44455667788876432211 2477888899888776 7899999888887766664 89999986
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHH-cccceEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVR-QYADALML 404 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~-~G~D~vmL 404 (575)
+++ .+. .+++++-+.||||++.|.|- .|..|+...++++. .|.+-++|
T Consensus 198 r~~------~n~-----~LL~~va~~~kPVilk~G~~--------~tl~ei~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 198 RNA------QNF-----RLLSKAGSYNKPVLLKRGFM--------NTIEEFLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp GGT------TCH-----HHHHHHHTTCSCEEEECCTT--------CCHHHHHHHHHHHHHTTCCCEEE
T ss_pred ccc------cCH-----HHHHHHHccCCcEEEcCCCC--------CCHHHHHHHHHHHHHCCCCeEEE
Confidence 655 332 24555557899999976442 57788888887654 56655555
No 144
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=66.71 E-value=11 Score=37.35 Aligned_cols=115 Identities=22% Similarity=0.280 Sum_probs=61.9
Q ss_pred cCCCEEEecCc------------CChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHH----hc-CCEEEEeCCC
Q 008172 277 EGVDFIAMSFV------------CDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIV----EA-SDGIMVARGD 339 (575)
Q Consensus 277 ~gvd~I~~SfV------------~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~----~~-sDgImIaRGD 339 (575)
.|+|+|-+.|- .+++.+.++.+.+.+.- .+.++.|+=- ++.++.+++ +. +|+|.+.-+.
T Consensus 124 ~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~--~~pv~vk~~~--~~~~~~~~a~~l~~~G~d~i~v~~~~ 199 (311)
T 1ep3_A 124 ANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVS--KVPLYVKLSP--NVTDIVPIAKAVEAAGADGLTMINTL 199 (311)
T ss_dssp TTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHC--SSCEEEEECS--CSSCSHHHHHHHHHTTCSEEEECCCE
T ss_pred CCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhc--CCCEEEEECC--ChHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 89999877542 24444555555554431 3678888731 122333332 33 8999993211
Q ss_pred CCCC----------------CCCCChHHHHHHHHHHHHH-cCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceE
Q 008172 340 LGVD----------------IPLEQIPTVQEIIIHVCRQ-LNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADAL 402 (575)
Q Consensus 340 Lg~e----------------~~~e~v~~~Qk~Ii~~c~~-~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~v 402 (575)
-|.. +.-+......-..++.+++ ...|+|.+.-+- + ..|+..++..|+|+|
T Consensus 200 ~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~---------~---~~d~~~~l~~GAd~V 267 (311)
T 1ep3_A 200 MGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVA---------N---AQDVLEMYMAGASAV 267 (311)
T ss_dssp EECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCC---------S---HHHHHHHHHHTCSEE
T ss_pred cccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcC---------C---HHHHHHHHHcCCCEE
Confidence 1110 0001111122344444443 489999864332 2 346677888999999
Q ss_pred EeccC
Q 008172 403 MLSGE 407 (575)
Q Consensus 403 mLs~E 407 (575)
++..-
T Consensus 268 ~vg~~ 272 (311)
T 1ep3_A 268 AVGTA 272 (311)
T ss_dssp EECTH
T ss_pred EECHH
Confidence 99743
No 145
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=66.02 E-value=23 Score=35.95 Aligned_cols=97 Identities=16% Similarity=0.158 Sum_probs=60.3
Q ss_pred HHHHHHHHcCCCEEEec------CcCChhhHHHHHHH-HhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAMS------FVCDADSVRHLKKY-VSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S------fV~sa~dv~~ir~~-l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.+++.++.|+|+|++. +-=|.++=.++-+. ++..+ .++.||+-+= +.++++......+. +|++|+-+
T Consensus 48 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVK-GRIPVIAGTGANSTREAVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp HHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 45567889999999773 33345555554443 33333 4688888874 57777777666666 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- ...+.+...-+.| +.+.+.|+++-
T Consensus 127 P~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 155 (314)
T 3qze_A 127 PYYNK-PTQEGMYQHFRHI---AEAVAIPQILY 155 (314)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHSCSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 44321 1223344444444 44558999985
No 146
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=65.81 E-value=59 Score=31.34 Aligned_cols=118 Identities=16% Similarity=0.193 Sum_probs=73.3
Q ss_pred HHHHHHHHcCCCEEEe-----cCcCC----hhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCC
Q 008172 269 DDIEFGIAEGVDFIAM-----SFVCD----ADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARG 338 (575)
Q Consensus 269 ~di~~al~~gvd~I~~-----SfV~s----a~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRG 338 (575)
++++...+.|+|++-+ .||.+ ++-++++|+..+. . ..+-+=.++++++. -++..++. +|+|-+-
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~-~-~~~dvhLmv~~p~~--~i~~~~~aGad~itvH-- 94 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQ-D-PFFDMHMMVSKPEQ--WVKPMAVAGANQYTFH-- 94 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCS-S-SCEEEEEECSCGGG--GHHHHHHHTCSEEEEE--
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCC-C-CcEEEEEEeCCHHH--HHHHHHHcCCCEEEEc--
Confidence 5566777889999988 88765 4567777775410 0 11233346888863 47777777 8999995
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEe-ccCcCCCC
Q 008172 339 DLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALML-SGESAIGP 412 (575)
Q Consensus 339 DLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmL-s~ETa~G~ 412 (575)
.|-+ +. -.+.++.++++|+.++++. +|.-.-+.+. .+.+.+|.|++ |-++..|-
T Consensus 95 ---~Ea~-~~----~~~~i~~i~~~G~k~gval--------~p~t~~e~l~----~~l~~~D~Vl~msv~pGf~G 149 (228)
T 3ovp_A 95 ---LEAT-EN----PGALIKDIRENGMKVGLAI--------KPGTSVEYLA----PWANQIDMALVMTVEPGFGG 149 (228)
T ss_dssp ---GGGC-SC----HHHHHHHHHHTTCEEEEEE--------CTTSCGGGTG----GGGGGCSEEEEESSCTTTCS
T ss_pred ---cCCc-hh----HHHHHHHHHHcCCCEEEEE--------cCCCCHHHHH----HHhccCCeEEEeeecCCCCC
Confidence 1211 12 3577888899999999974 2222222222 33566888866 44655554
No 147
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=65.46 E-value=34 Score=34.44 Aligned_cols=97 Identities=16% Similarity=0.173 Sum_probs=60.0
Q ss_pred HHHHHHHHcCCCEEEe------cCcCChhhHHHHHHH-HhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAM------SFVCDADSVRHLKKY-VSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~------SfV~sa~dv~~ir~~-l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.++|.++.|+|+|++ ++.-|.++=.++-+. .+..+ .++.||+-+= +.++++....--+. +|++|+-+
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~ 119 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVG-DRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVT 119 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHT-TTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 4557888999999986 334455555554443 33333 4688998884 47777777666665 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+...-+. .+.+.+.|+++-
T Consensus 120 P~y~~-~~~~~l~~~f~~---ia~a~~lPiilY 148 (304)
T 3cpr_A 120 PYYSK-PSQEGLLAHFGA---IAAATEVPICLY 148 (304)
T ss_dssp CCSSC-CCHHHHHHHHHH---HHHHCCSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHH---HHHhcCCCEEEE
Confidence 54311 112333333333 455568999974
No 148
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=65.26 E-value=89 Score=31.33 Aligned_cols=116 Identities=14% Similarity=0.015 Sum_probs=67.2
Q ss_pred CHHHHHHHHHcCCCE-EEecCcCChhhHHHHHHHHhccC--CCCceEEee--ecCHHHHhcHHHHHhc-CCEEEEeCCCC
Q 008172 267 DWDDIEFGIAEGVDF-IAMSFVCDADSVRHLKKYVSGKS--SRSIKVLAK--IENLESLQKFEEIVEA-SDGIMVARGDL 340 (575)
Q Consensus 267 D~~di~~al~~gvd~-I~~SfV~sa~dv~~ir~~l~~~~--~~~i~IIaK--IEt~~av~nldeI~~~-sDgImIaRGDL 340 (575)
+.++...+.+.|..+ +...+..+++++.+.-+.+++.. .-.+.++.. +.+++--+.++.+++. +|+|.++-|+
T Consensus 28 ~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~- 106 (328)
T 2gjl_A 28 RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND- 106 (328)
T ss_dssp SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC-
T ss_pred cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC-
Confidence 566666677777644 44455566877655433333221 112344442 0023323445566665 8999987432
Q ss_pred CCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcC
Q 008172 341 GVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESA 409 (575)
Q Consensus 341 g~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa 409 (575)
| ..+++.++++|.|++... .|.. +...+...|+|++.+++=++
T Consensus 107 ----p--------~~~~~~l~~~gi~vi~~v-----------~t~~---~a~~~~~~GaD~i~v~g~~~ 149 (328)
T 2gjl_A 107 ----P--------GEHIAEFRRHGVKVIHKC-----------TAVR---HALKAERLGVDAVSIDGFEC 149 (328)
T ss_dssp ----C--------HHHHHHHHHTTCEEEEEE-----------SSHH---HHHHHHHTTCSEEEEECTTC
T ss_pred ----c--------HHHHHHHHHcCCCEEeeC-----------CCHH---HHHHHHHcCCCEEEEECCCC
Confidence 2 356777888899998531 2222 34457789999999976433
No 149
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=65.22 E-value=41 Score=32.48 Aligned_cols=132 Identities=16% Similarity=0.119 Sum_probs=62.3
Q ss_pred cCHHHHHHHHHcCCCEEEecCcCC--hhhHHHHHHHHhccC--CCCce--EEe-------eecCH--------HHHhcHH
Q 008172 266 KDWDDIEFGIAEGVDFIAMSFVCD--ADSVRHLKKYVSGKS--SRSIK--VLA-------KIENL--------ESLQKFE 324 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~SfV~s--a~dv~~ir~~l~~~~--~~~i~--IIa-------KIEt~--------~av~nld 324 (575)
.+.+++..+++.|+|.|.+.-.-- ..+...+++++...+ .+.+. +=+ +++.. ...+-+.
T Consensus 84 ~~~~~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~ 163 (266)
T 2w6r_A 84 GKMEHFLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVV 163 (266)
T ss_dssp CSTHHHHHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHH
T ss_pred CCHHHHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHH
Confidence 356778888899999998864211 114455555554332 11211 111 12211 1223334
Q ss_pred HHHhc-CCEEEEeCCC-CCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceE
Q 008172 325 EIVEA-SDGIMVARGD-LGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADAL 402 (575)
Q Consensus 325 eI~~~-sDgImIaRGD-Lg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~v 402 (575)
.+.+. ++.|++...+ =|...+. ++ . .+-+.+...+.|++... ..-+.. |+..+...|+|++
T Consensus 164 ~~~~~G~~~i~~t~~~~~g~~~g~-~~-~---~i~~l~~~~~ipvia~G---------GI~~~e---d~~~~~~~Gadgv 226 (266)
T 2w6r_A 164 EVEKRGAGEILLTSIDRDGTKSGY-DT-E---MIRFVRPLTTLPIIASG---------GAGKME---HFLEAFLAGADAA 226 (266)
T ss_dssp HHHHTTCSEEEEEETTTTTTCSCC-CH-H---HHHHHGGGCCSCEEEES---------CCCSHH---HHHHHHHHTCSEE
T ss_pred HHHHcCCCEEEEEeecCCCCcCCC-CH-H---HHHHHHHHcCCCEEEeC---------CCCCHH---HHHHHHHcCCHHH
Confidence 44444 7888874211 1222222 21 1 22223344589999754 233334 5555556799999
Q ss_pred EeccCcCCCCCH
Q 008172 403 MLSGESAIGPFG 414 (575)
Q Consensus 403 mLs~ETa~G~yP 414 (575)
+...---.+.++
T Consensus 227 ~vgsal~~~~~~ 238 (266)
T 2w6r_A 227 LAASVFHFREID 238 (266)
T ss_dssp EESTTTC-----
T ss_pred HccHHHHcCCCC
Confidence 997444444433
No 150
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=65.18 E-value=85 Score=28.87 Aligned_cols=123 Identities=9% Similarity=0.115 Sum_probs=68.0
Q ss_pred CHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCCC
Q 008172 267 DWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVDIP 345 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e~~ 345 (575)
+.+.++.+.+.|+|+| ++..-.++ +.+++.+.| +.+++.+-|.+- +..-++. +|.+-+-++++
T Consensus 72 ~~~~~~~a~~~Gad~i-v~~~~~~~----~~~~~~~~g---~~vi~g~~t~~e---~~~a~~~Gad~vk~~~~~~----- 135 (205)
T 1wa3_A 72 SVEQCRKAVESGAEFI-VSPHLDEE----ISQFCKEKG---VFYMPGVMTPTE---LVKAMKLGHTILKLFPGEV----- 135 (205)
T ss_dssp SHHHHHHHHHHTCSEE-ECSSCCHH----HHHHHHHHT---CEEECEECSHHH---HHHHHHTTCCEEEETTHHH-----
T ss_pred CHHHHHHHHHcCCCEE-EcCCCCHH----HHHHHHHcC---CcEECCcCCHHH---HHHHHHcCCCEEEEcCccc-----
Confidence 4556788999999999 55444433 333444444 577876655442 2222233 78877643211
Q ss_pred CCChHHHHHHHHHHHHHc-CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCC---HHHHHHHH
Q 008172 346 LEQIPTVQEIIIHVCRQL-NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPF---GQKAVSVL 421 (575)
Q Consensus 346 ~e~v~~~Qk~Ii~~c~~~-gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~y---PveaV~~m 421 (575)
.-.+.+-+.+... +.|++.+..+ +. .++..+...|+|++....-... .. |.+.++.+
T Consensus 136 -----~g~~~~~~l~~~~~~~pvia~GGI----------~~---~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~ 196 (205)
T 1wa3_A 136 -----VGPQFVKAMKGPFPNVKFVPTGGV----------NL---DNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAF 196 (205)
T ss_dssp -----HHHHHHHHHHTTCTTCEEEEBSSC----------CT---TTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHH
T ss_pred -----cCHHHHHHHHHhCCCCcEEEcCCC----------CH---HHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHH
Confidence 0112222222334 6788765322 21 3667788899999998644333 44 66665555
Q ss_pred HHH
Q 008172 422 QMA 424 (575)
Q Consensus 422 ~~I 424 (575)
.++
T Consensus 197 ~~~ 199 (205)
T 1wa3_A 197 VEK 199 (205)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 151
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=65.05 E-value=19 Score=35.93 Aligned_cols=118 Identities=15% Similarity=0.181 Sum_probs=68.1
Q ss_pred HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCCCCC-C
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPL-E 347 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e~~~-e 347 (575)
+.++.+.+.|+|+++++-+-. +++.++.+.+++.|.+.+.+++-. ...+.+++|.+.+.|....-.=.|+ .|. .
T Consensus 110 ~f~~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~gl~~i~liap~---s~~eri~~ia~~~~gfiy~vs~~G~-TG~~~ 184 (271)
T 1ujp_A 110 RFFGLFKQAGATGVILPDLPP-DEDPGLVRLAQEIGLETVFLLAPT---STDARIATVVRHATGFVYAVSVTGV-TGMRE 184 (271)
T ss_dssp HHHHHHHHHTCCEEECTTCCG-GGCHHHHHHHHHHTCEEECEECTT---CCHHHHHHHHTTCCSCEEEECC---------
T ss_pred HHHHHHHHcCCCEEEecCCCH-HHHHHHHHHHHHcCCceEEEeCCC---CCHHHHHHHHHhCCCCEEEEecCcc-cCCCC
Confidence 445667888999999987754 778888888877763334444433 3346788999987665433111111 121 1
Q ss_pred ChHHHHHHHHHHHHHc-CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 348 QIPTVQEIIIHVCRQL-NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 348 ~v~~~Qk~Ii~~c~~~-gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
..+.-....++..+++ +.|+++... .=|.+.+ .. + .|+|+++..
T Consensus 185 ~~~~~~~~~v~~vr~~~~~Pv~vGfG---------I~t~e~a---~~-~-~~ADgVIVG 229 (271)
T 1ujp_A 185 RLPEEVKDLVRRIKARTALPVAVGFG---------VSGKATA---AQ-A-AVADGVVVG 229 (271)
T ss_dssp ----CCHHHHHHHHTTCCSCEEEESC---------CCSHHHH---HH-H-TTSSEEEEC
T ss_pred CCCccHHHHHHHHHhhcCCCEEEEcC---------CCCHHHH---HH-h-cCCCEEEEC
Confidence 1111113445555554 789998643 3344433 33 3 889999985
No 152
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=64.95 E-value=1.2e+02 Score=30.35 Aligned_cols=133 Identities=14% Similarity=0.206 Sum_probs=82.7
Q ss_pred HHHHH--cCCCEEEecCc-------CChhhHHHHHHHHhccCCCCceEEe-eecCHHHHhcHHHHHhcCCEEEEeCCCCC
Q 008172 272 EFGIA--EGVDFIAMSFV-------CDADSVRHLKKYVSGKSSRSIKVLA-KIENLESLQKFEEIVEASDGIMVARGDLG 341 (575)
Q Consensus 272 ~~al~--~gvd~I~~SfV-------~sa~dv~~ir~~l~~~~~~~i~IIa-KIEt~~av~nldeI~~~sDgImIaRGDLg 341 (575)
+.|.+ .|-+||=+--+ .+..+..+.-+.+.+.| ..++. ...++.--..+.+. -.|.+|.-....|
T Consensus 94 ~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~G---f~Vlpy~~dd~~~akrl~~~--G~~aVmPlg~pIG 168 (265)
T 1wv2_A 94 RLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDG---FDVMVYTSDDPIIARQLAEI--GCIAVMPLAGLIG 168 (265)
T ss_dssp HHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTT---CEEEEEECSCHHHHHHHHHS--CCSEEEECSSSTT
T ss_pred HHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCC---CEEEEEeCCCHHHHHHHHHh--CCCEEEeCCccCC
Confidence 34555 48889888877 33333333333343334 56663 66666544443322 2789988434455
Q ss_pred CCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHH
Q 008172 342 VDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVL 421 (575)
Q Consensus 342 ~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m 421 (575)
...|+.+ +..-+.|.+ ..+.|||++-. .-|. +|++.+...|+|+|++..=-+.++.|.+-.+.|
T Consensus 169 sG~Gi~~-~~lI~~I~e---~~~vPVI~eGG---------I~TP---sDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af 232 (265)
T 1wv2_A 169 SGLGICN-PYNLRIILE---EAKVPVLVDAG---------VGTA---SDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAM 232 (265)
T ss_dssp CCCCCSC-HHHHHHHHH---HCSSCBEEESC---------CCSH---HHHHHHHHHTCSEEEESHHHHTSSSHHHHHHHH
T ss_pred CCCCcCC-HHHHHHHHh---cCCCCEEEeCC---------CCCH---HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHH
Confidence 5556655 444455544 46899998643 3333 467999999999999986556688998777776
Q ss_pred HHHH
Q 008172 422 QMAS 425 (575)
Q Consensus 422 ~~I~ 425 (575)
..-+
T Consensus 233 ~~Av 236 (265)
T 1wv2_A 233 KHAI 236 (265)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 153
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=64.95 E-value=22 Score=35.89 Aligned_cols=97 Identities=12% Similarity=0.168 Sum_probs=59.7
Q ss_pred HHHHHHHHcCCCEEEe------cCcCChhhHHHHHHHH-hccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAM------SFVCDADSVRHLKKYV-SGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~------SfV~sa~dv~~ir~~l-~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.+++.++.|+|+|++ ++--|.++=.++-+.. +..+ .++.||+-+= +.++++....--+. +|++|+.+
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~-grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~ 115 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVD-GKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVT 115 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECC
Confidence 4556888999999986 3445555555554443 3333 4688998884 47777766666665 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+...-+. .|.+.+.|+++.
T Consensus 116 P~y~~-~s~~~l~~~f~~---va~a~~lPiilY 144 (306)
T 1o5k_A 116 PYYNK-PTQEGLYQHYKY---ISERTDLGIVVY 144 (306)
T ss_dssp CCSSC-CCHHHHHHHHHH---HHTTCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHH---HHHhCCCCEEEE
Confidence 44321 122333333333 345568999975
No 154
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=64.70 E-value=63 Score=31.22 Aligned_cols=120 Identities=11% Similarity=0.099 Sum_probs=66.5
Q ss_pred HHHHHHHHHcCCCEEEecCcC----------ChhhHHHHHHHHhccCCCCceEEee---------ecC------HHHHhc
Q 008172 268 WDDIEFGIAEGVDFIAMSFVC----------DADSVRHLKKYVSGKSSRSIKVLAK---------IEN------LESLQK 322 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~----------sa~dv~~ir~~l~~~~~~~i~IIaK---------IEt------~~av~n 322 (575)
.+.++.+.+.|+|+|=+.+-. +.+++.++++.+++.| +.+.+- +-+ .++++.
T Consensus 33 ~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g---l~i~~~~~~~~~~~~l~~~d~~~r~~~~~~ 109 (295)
T 3cqj_A 33 LERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETG---VRVPSMCLSAHRRFPLGSEDDAVRAQGLEI 109 (295)
T ss_dssp HHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHC---CEEEEEEEGGGGTSCTTCSSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcC---CeEEEEecCcccCCCCCCCCHHHHHHHHHH
Confidence 356778889999999887654 4678899999998876 333221 111 123455
Q ss_pred HHHHHhc-----CCEEEEeCCCCCCCCCC----CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH
Q 008172 323 FEEIVEA-----SDGIMVARGDLGVDIPL----EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE 393 (575)
Q Consensus 323 ldeI~~~-----sDgImIaRGDLg~e~~~----e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n 393 (575)
+...++. ++.|.+..++-..+.+. +.+...-+++.+.+.++|..+.+ |-+-.+...|.+++.++..
T Consensus 110 ~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----En~~~~~~~~~~~~~~l~~ 184 (295)
T 3cqj_A 110 MRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAM-----EIMDYPLMNSISKALGYAH 184 (295)
T ss_dssp HHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEE-----ECCSSGGGCSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEE-----eeCCCcccCCHHHHHHHHH
Confidence 5555444 56666653332111111 12333345666667777766553 3332223445566666655
Q ss_pred HH
Q 008172 394 AV 395 (575)
Q Consensus 394 av 395 (575)
.+
T Consensus 185 ~v 186 (295)
T 3cqj_A 185 YL 186 (295)
T ss_dssp HH
T ss_pred hc
Confidence 44
No 155
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=64.43 E-value=12 Score=37.00 Aligned_cols=69 Identities=19% Similarity=0.253 Sum_probs=51.5
Q ss_pred HHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeCCCCCC
Q 008172 271 IEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVARGDLGV 342 (575)
Q Consensus 271 i~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaRGDLg~ 342 (575)
.+.+.+.|+|||-.||-.+.++++++++... . -.++.+.-|- ..++++|+.+.++. +||+-++|.=+.-
T Consensus 165 ~~~a~~~GAD~vkt~~~~~~e~~~~~~~~~~-~--~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~ 237 (263)
T 1w8s_A 165 ARIALELGADAMKIKYTGDPKTFSWAVKVAG-K--VPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQR 237 (263)
T ss_dssp HHHHHHHTCSEEEEECCSSHHHHHHHHHHTT-T--SCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTS
T ss_pred HHHHHHcCCCEEEEcCCCCHHHHHHHHHhCC-C--CeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCC
Confidence 4668899999999999667888888887652 1 1366666663 35677889888887 8999998765533
No 156
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=64.36 E-value=10 Score=41.05 Aligned_cols=51 Identities=22% Similarity=0.324 Sum_probs=43.1
Q ss_pred CceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHH
Q 008172 90 KTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQL 140 (575)
Q Consensus 90 ~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~ 140 (575)
+-.+-+.+|....+.+.+++|+++|+++.-||++||..+...++++.+|+.
T Consensus 219 rL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~ 269 (496)
T 4fxs_A 219 RLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA 269 (496)
T ss_dssp CBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH
T ss_pred ceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHH
Confidence 445667888888889999999999999999999999887777777777753
No 157
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=64.18 E-value=65 Score=31.65 Aligned_cols=116 Identities=18% Similarity=0.298 Sum_probs=71.2
Q ss_pred HHHHHHHHcCCCEEEe-----cCcCC----hhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCC
Q 008172 269 DDIEFGIAEGVDFIAM-----SFVCD----ADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARG 338 (575)
Q Consensus 269 ~di~~al~~gvd~I~~-----SfV~s----a~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRG 338 (575)
+.++...+.|+|++-+ .||.+ +.-++++|+.... ..+-+=.||++++.. ++..++. +|+|-+.
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~---~~ldvHLmv~~p~~~--i~~~~~aGAd~itvH-- 116 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGIT---AGMDVHLMVKPVDAL--IESFAKAGATSIVFH-- 116 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCC---SCEEEEEECSSCHHH--HHHHHHHTCSEEEEC--
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCC---CeEEEEEeeCCHHHH--HHHHHHcCCCEEEEc--
Confidence 4566667789999877 77654 4556777665311 112233678988764 6777776 8999985
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEe-ccCcCCC
Q 008172 339 DLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALML-SGESAIG 411 (575)
Q Consensus 339 DLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmL-s~ETa~G 411 (575)
.|-+ +. -.+.++.++++|+-++++. ||.-.-+.+ ..+++++|.|++ |-+...|
T Consensus 117 ---~Ea~-~~----~~~~i~~ir~~G~k~Gval--------np~Tp~e~l----~~~l~~vD~VlvMsV~PGfg 170 (246)
T 3inp_A 117 ---PEAS-EH----IDRSLQLIKSFGIQAGLAL--------NPATGIDCL----KYVESNIDRVLIMSVNPGFG 170 (246)
T ss_dssp ---GGGC-SC----HHHHHHHHHTTTSEEEEEE--------CTTCCSGGG----TTTGGGCSEEEEECSCTTC-
T ss_pred ---cccc-hh----HHHHHHHHHHcCCeEEEEe--------cCCCCHHHH----HHHHhcCCEEEEeeecCCCC
Confidence 1111 22 2577888899999999974 232111222 244667998876 4454444
No 158
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=64.17 E-value=44 Score=34.57 Aligned_cols=120 Identities=15% Similarity=0.174 Sum_probs=67.0
Q ss_pred CCCccCHHHH--------HHHHHcCCCEEEe-------------cCcCChhh----------------HHHHHHHHhccC
Q 008172 262 TLSKKDWDDI--------EFGIAEGVDFIAM-------------SFVCDADS----------------VRHLKKYVSGKS 304 (575)
Q Consensus 262 ~lsekD~~di--------~~al~~gvd~I~~-------------SfV~sa~d----------------v~~ir~~l~~~~ 304 (575)
.||+.|++.+ +.+.+.|+|+|=+ |..+...| ++++|+.+ +
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v---g 226 (365)
T 2gou_A 150 AMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAI---G 226 (365)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHc---C
Confidence 5677766544 4567899999987 33333322 44555544 2
Q ss_pred CCCceEEeeecCH---------HHHhcHHHHHhc-----CCEEEEeCCCCCCCCCCCChHHHHHHHHHH-HHHcCCCEEE
Q 008172 305 SRSIKVLAKIENL---------ESLQKFEEIVEA-----SDGIMVARGDLGVDIPLEQIPTVQEIIIHV-CRQLNKPVIV 369 (575)
Q Consensus 305 ~~~i~IIaKIEt~---------~av~nldeI~~~-----sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~-c~~~gKPviv 369 (575)
++ .|..||--. ..++...++++. +|+|-+.-+...- .+..+ ...++. .+..+.|||.
T Consensus 227 -~~-pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~---~~~~~---~~~~~~i~~~~~iPvi~ 298 (365)
T 2gou_A 227 -AE-RVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDD---APDTP---VSFKRALREAYQGVLIY 298 (365)
T ss_dssp -GG-GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTB---CCCCC---HHHHHHHHHHCCSEEEE
T ss_pred -CC-cEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCC---CCCcc---HHHHHHHHHHCCCcEEE
Confidence 33 577777321 123333333332 7999998764421 11111 123333 3345789987
Q ss_pred ehhhHHhhhcCCCCChhhHhhHHHHHHcc-cceEEec
Q 008172 370 ASQLLESMVEYPTPTRAEVADVSEAVRQY-ADALMLS 405 (575)
Q Consensus 370 aTq~LeSM~~~p~PtrAEv~Dv~nav~~G-~D~vmLs 405 (575)
... . |. .+...++..| +|+|++.
T Consensus 299 ~Gg---------i-~~---~~a~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 299 AGR---------Y-NA---EKAEQAINDGLADMIGFG 322 (365)
T ss_dssp ESS---------C-CH---HHHHHHHHTTSCSEEECC
T ss_pred eCC---------C-CH---HHHHHHHHCCCcceehhc
Confidence 543 2 33 3446677788 9999996
No 159
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=64.13 E-value=32 Score=33.45 Aligned_cols=114 Identities=18% Similarity=0.205 Sum_probs=62.8
Q ss_pred HHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCE-EEEeC-CC-CCCCCCCCChH
Q 008172 274 GIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDG-IMVAR-GD-LGVDIPLEQIP 350 (575)
Q Consensus 274 al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDg-ImIaR-GD-Lg~e~~~e~v~ 350 (575)
+.+.|+|+|.++.... +++.++.+.+++.|.+.+..++ .....+.+.++.+..+| +.+.. +. -|..-+. .+
T Consensus 114 a~~aGadgv~v~d~~~-~~~~~~~~~~~~~g~~~i~~~a---~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~--~~ 187 (262)
T 1rd5_A 114 MKEAGVHGLIVPDLPY-VAAHSLWSEAKNNNLELVLLTT---PAIPEDRMKEITKASEGFVYLVSVNGVTGPRANV--NP 187 (262)
T ss_dssp HHHTTCCEEECTTCBT-TTHHHHHHHHHHTTCEECEEEC---TTSCHHHHHHHHHHCCSCEEEECSSCCBCTTSCB--CT
T ss_pred HHHcCCCEEEEcCCCh-hhHHHHHHHHHHcCCceEEEEC---CCCCHHHHHHHHhcCCCeEEEecCCCCCCCCcCC--Cc
Confidence 7899999999976543 5677777777776633233333 22234566777777654 44432 11 1221111 12
Q ss_pred HHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 351 TVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 351 ~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
...+.+-+.....+.|+++..- .-|.. ++..+...|+|++...
T Consensus 188 ~~~~~i~~v~~~~~~pI~vgGG---------I~~~e---~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 188 RVESLIQEVKKVTNKPVAVGFG---------ISKPE---HVKQIAQWGADGVIIG 230 (262)
T ss_dssp HHHHHHHHHHHHCSSCEEEESC---------CCSHH---HHHHHHHTTCSEEEEC
T ss_pred hHHHHHHHHHhhcCCeEEEECC---------cCCHH---HHHHHHHcCCCEEEEC
Confidence 2222333333334789998543 22233 4455566899999874
No 160
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=63.89 E-value=16 Score=35.43 Aligned_cols=108 Identities=14% Similarity=0.126 Sum_probs=67.0
Q ss_pred cCHHHH-HHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCC
Q 008172 266 KDWDDI-EFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVD 343 (575)
Q Consensus 266 kD~~di-~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e 343 (575)
.+...+ +-.++.|++.|=++| +++.-.+.++.+-++. .+..|=+ -|.--.+..+..++. +|.|+- ++
T Consensus 25 ~~a~~~a~al~~gGi~~iEvt~-~t~~a~~~I~~l~~~~--p~~~IGA--GTVlt~~~a~~ai~AGA~fivs-P~----- 93 (217)
T 3lab_A 25 VHAIPMAKALVAGGVHLLEVTL-RTEAGLAAISAIKKAV--PEAIVGA--GTVCTADDFQKAIDAGAQFIVS-PG----- 93 (217)
T ss_dssp GGHHHHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC--TTSEEEE--ECCCSHHHHHHHHHHTCSEEEE-SS-----
T ss_pred HHHHHHHHHHHHcCCCEEEEeC-CCccHHHHHHHHHHHC--CCCeEee--ccccCHHHHHHHHHcCCCEEEe-CC-----
Confidence 343333 445688999999887 5566666655544333 2333322 233344555555555 666643 33
Q ss_pred CCCCChHHHHHHHHHHHHHcCC------CEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEecc
Q 008172 344 IPLEQIPTVQEIIIHVCRQLNK------PVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 344 ~~~e~v~~~Qk~Ii~~c~~~gK------PvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ 406 (575)
.-.++++.|+++|. |++- --+-.+++..|...|+|.+-+.-
T Consensus 94 --------~~~evi~~~~~~~v~~~~~~~~~P--------------G~~TptE~~~A~~~Gad~vK~FP 140 (217)
T 3lab_A 94 --------LTPELIEKAKQVKLDGQWQGVFLP--------------GVATASEVMIAAQAGITQLKCFP 140 (217)
T ss_dssp --------CCHHHHHHHHHHHHHCSCCCEEEE--------------EECSHHHHHHHHHTTCCEEEETT
T ss_pred --------CcHHHHHHHHHcCCCccCCCeEeC--------------CCCCHHHHHHHHHcCCCEEEECc
Confidence 24578899999999 8872 22234566889999999998754
No 161
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=63.48 E-value=80 Score=30.95 Aligned_cols=92 Identities=21% Similarity=0.199 Sum_probs=54.5
Q ss_pred cHHHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccc
Q 008172 322 KFEEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYAD 400 (575)
Q Consensus 322 nldeI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D 400 (575)
.+..+.+. +|.|+.--|+.|..-+... +..-+++. .....|+++.-- .-|. .|+..++..|+|
T Consensus 139 ~a~~~~~~gad~v~~~~~~~Gt~~~~~~-~~~l~~i~---~~~~iPviv~gG---------I~t~---eda~~~~~~GAd 202 (264)
T 1xm3_A 139 LARKLEELGVHAIMPGASPIGSGQGILN-PLNLSFII---EQAKVPVIVDAG---------IGSP---KDAAYAMELGAD 202 (264)
T ss_dssp HHHHHHHHTCSCBEECSSSTTCCCCCSC-HHHHHHHH---HHCSSCBEEESC---------CCSH---HHHHHHHHTTCS
T ss_pred HHHHHHHhCCCEEEECCcccCCCCCCCC-HHHHHHHH---hcCCCCEEEEeC---------CCCH---HHHHHHHHcCCC
Confidence 34445544 7888553455555444333 33333332 235789998532 2223 356777889999
Q ss_pred eEEeccCcCCCCCHHHHHHHHHHHHHHHh
Q 008172 401 ALMLSGESAIGPFGQKAVSVLQMASSRME 429 (575)
Q Consensus 401 ~vmLs~ETa~G~yPveaV~~m~~I~~~aE 429 (575)
++....--.....|.++++.+.+.+++..
T Consensus 203 gViVGSAi~~a~dp~~~~~~l~~~v~~~~ 231 (264)
T 1xm3_A 203 GVLLNTAVSGADDPVKMARAMKLAVEAGR 231 (264)
T ss_dssp EEEESHHHHTSSSHHHHHHHHHHHHHHHH
T ss_pred EEEEcHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 99997543334568888888777665543
No 162
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=63.20 E-value=28 Score=34.80 Aligned_cols=97 Identities=18% Similarity=0.170 Sum_probs=58.9
Q ss_pred HHHHHHHHcCCCEEEe------cCcCChhhHHHHHHH-HhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAM------SFVCDADSVRHLKKY-VSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~------SfV~sa~dv~~ir~~-l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.++|.++.|+|+|++ ++--|.++=.++-+. .+..+ .++.||+-+= +.++++....--+. +|++|+.+
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (292)
T 2vc6_A 25 DLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTAN-GRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVS 103 (292)
T ss_dssp HHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcC
Confidence 4557888999999975 234455555554443 33333 4578888874 36777766666665 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+...-+ +.+.+.+.|+++-
T Consensus 104 P~y~~-~s~~~l~~~f~---~ia~a~~lPiilY 132 (292)
T 2vc6_A 104 PYYNK-PTQEGIYQHFK---AIDAASTIPIIVY 132 (292)
T ss_dssp CCSSC-CCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHH---HHHHhCCCCEEEE
Confidence 44311 12223333333 3455668999974
No 163
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=62.93 E-value=28 Score=34.97 Aligned_cols=97 Identities=18% Similarity=0.152 Sum_probs=59.0
Q ss_pred HHHHHHHHcCCCEEEec------CcCChhhHHHHHHH-HhccCCC-CceEEeeec---CHHHHhcHHHHHhc-CCEEEEe
Q 008172 269 DDIEFGIAEGVDFIAMS------FVCDADSVRHLKKY-VSGKSSR-SIKVLAKIE---NLESLQKFEEIVEA-SDGIMVA 336 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S------fV~sa~dv~~ir~~-l~~~~~~-~i~IIaKIE---t~~av~nldeI~~~-sDgImIa 336 (575)
+.+++.++.|+|+|++. +--|.++=.++-+. .+..+ . ++.||+-+= +.++++.....-+. +|++|+-
T Consensus 32 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 110 (301)
T 3m5v_A 32 RLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCK-GTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSV 110 (301)
T ss_dssp HHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 45568889999999774 23344444444443 33333 4 688998873 56666666666666 8999997
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 337 RGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 337 RGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
+-...- .+.+.+.. ..-+.|.+.+.|+++-
T Consensus 111 ~P~y~~-~s~~~l~~---~f~~va~a~~lPiilY 140 (301)
T 3m5v_A 111 APYYNK-PTQQGLYE---HYKAIAQSVDIPVLLY 140 (301)
T ss_dssp CCCSSC-CCHHHHHH---HHHHHHHHCSSCEEEE
T ss_pred CCCCCC-CCHHHHHH---HHHHHHHhCCCCEEEE
Confidence 554421 12233333 3334455568999975
No 164
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=62.67 E-value=21 Score=36.12 Aligned_cols=97 Identities=13% Similarity=0.139 Sum_probs=58.8
Q ss_pred HHHHHHHHcCCCEEEec------CcCChhhHHHHHHHH-hccCCCCceEEeee---cCHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAMS------FVCDADSVRHLKKYV-SGKSSRSIKVLAKI---ENLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S------fV~sa~dv~~ir~~l-~~~~~~~i~IIaKI---Et~~av~nldeI~~~-sDgImIaR 337 (575)
+.++|.++.|+|+|++. +-=|.++=.++-+.. +..+ .++.||+-+ -+.++++......+. +|++|+.+
T Consensus 40 ~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG-DRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 45568889999998764 333445544444433 3333 468899888 356666666666555 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- +.-..+.+..-+.|.+.+.|+++-
T Consensus 119 P~y~~----~s~~~l~~~f~~va~a~~lPiilY 147 (304)
T 3l21_A 119 PYYSK----PPQRGLQAHFTAVADATELPMLLY 147 (304)
T ss_dssp CCSSC----CCHHHHHHHHHHHHTSCSSCEEEE
T ss_pred CCCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 44321 122233333344455568999975
No 165
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=62.63 E-value=35 Score=33.54 Aligned_cols=132 Identities=13% Similarity=0.099 Sum_probs=75.5
Q ss_pred CHHHHHHHHHcCCCEEEecCc-CChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCC
Q 008172 267 DWDDIEFGIAEGVDFIAMSFV-CDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVDI 344 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~SfV-~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e~ 344 (575)
|...+..+.+.|+|+|.+--- -+ ++++++.+.....| +.+++-+.+.+-+ +..++. +|.|=+..-+|.. +
T Consensus 117 d~~qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lG---l~~lvev~~~~E~---~~a~~~gad~IGvn~~~l~~-~ 188 (254)
T 1vc4_A 117 DPFMLEEARAFGASAALLIVALLG-ELTGAYLEEARRLG---LEALVEVHTEREL---EIALEAGAEVLGINNRDLAT-L 188 (254)
T ss_dssp SHHHHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHT---CEEEEEECSHHHH---HHHHHHTCSEEEEESBCTTT-C
T ss_pred CHHHHHHHHHcCCCEEEECccchH-HHHHHHHHHHHHCC---CeEEEEECCHHHH---HHHHHcCCCEEEEccccCcC-C
Confidence 344677799999999887422 12 56666655444554 3344445554433 333333 6888888777642 2
Q ss_pred CCCChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHH
Q 008172 345 PLEQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVL 421 (575)
Q Consensus 345 ~~e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m 421 (575)
+ .++. .-+++.+..... +.|++.. ...-|.+ |+..... |+|+++...---.+..|.++++-|
T Consensus 189 ~-~dl~-~~~~L~~~i~~~~~~~~vIAe---------gGI~s~~---dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l 252 (254)
T 1vc4_A 189 H-INLE-TAPRLGRLARKRGFGGVLVAE---------SGYSRKE---ELKALEG-LFDAVLIGTSLMRAPDLEAALREL 252 (254)
T ss_dssp C-BCTT-HHHHHHHHHHHTTCCSEEEEE---------SCCCSHH---HHHTTTT-TCSEEEECHHHHTSSCHHHHHHHH
T ss_pred C-CCHH-HHHHHHHhCccccCCCeEEEE---------cCCCCHH---HHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHH
Confidence 2 2221 223444444433 5677753 3444454 5555667 999999865555567787776654
No 166
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=62.10 E-value=37 Score=34.90 Aligned_cols=121 Identities=18% Similarity=0.256 Sum_probs=63.8
Q ss_pred HHHHHHHHcCCCEEEecC----------------cCChhhHHHHHHHHhccCCCCceEEeeec-------CH-HHHhcHH
Q 008172 269 DDIEFGIAEGVDFIAMSF----------------VCDADSVRHLKKYVSGKSSRSIKVLAKIE-------NL-ESLQKFE 324 (575)
Q Consensus 269 ~di~~al~~gvd~I~~Sf----------------V~sa~dv~~ir~~l~~~~~~~i~IIaKIE-------t~-~av~nld 324 (575)
+..+.+.+.|+|+|-+.+ .++++.+.++.+.+.+.- .+.|..||- +. +.++-..
T Consensus 74 ~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v--~~PV~vKiR~g~~~~~~~~~~~~~a~ 151 (350)
T 3b0p_A 74 EAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV--RVPVTVKMRLGLEGKETYRGLAQSVE 151 (350)
T ss_dssp HHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC--SSCEEEEEESCBTTCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh--CCceEEEEecCcCccccHHHHHHHHH
Confidence 444566788999987764 344555666655555432 367888873 11 2222233
Q ss_pred HHHhc-CCEEEEeCCCC--CCCCCCC--ChHHHHHHHHHHHH-Hc-CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHc
Q 008172 325 EIVEA-SDGIMVARGDL--GVDIPLE--QIPTVQEIIIHVCR-QL-NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQ 397 (575)
Q Consensus 325 eI~~~-sDgImIaRGDL--g~e~~~e--~v~~~Qk~Ii~~c~-~~-gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~ 397 (575)
.+.+. +|+|.|--+.- |.. |.. ..+...-..+...+ .. +.|||.... .-|.+ |+..++.
T Consensus 152 ~l~~aG~d~I~V~~r~~~~g~~-g~~~~~~~~~~~~~i~~ik~~~~~iPVianGg---------I~s~e---da~~~l~- 217 (350)
T 3b0p_A 152 AMAEAGVKVFVVHARSALLALS-TKANREIPPLRHDWVHRLKGDFPQLTFVTNGG---------IRSLE---EALFHLK- 217 (350)
T ss_dssp HHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEEESS---------CCSHH---HHHHHHT-
T ss_pred HHHHcCCCEEEEecCchhcccC-cccccCCCcccHHHHHHHHHhCCCCeEEEECC---------cCCHH---HHHHHHh-
Confidence 33333 79999974421 111 100 00001122333333 34 789998653 33443 3444554
Q ss_pred ccceEEec
Q 008172 398 YADALMLS 405 (575)
Q Consensus 398 G~D~vmLs 405 (575)
|+|+||+.
T Consensus 218 GaD~V~iG 225 (350)
T 3b0p_A 218 RVDGVMLG 225 (350)
T ss_dssp TSSEEEEC
T ss_pred CCCEEEEC
Confidence 99999996
No 167
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=62.09 E-value=20 Score=35.82 Aligned_cols=97 Identities=15% Similarity=0.144 Sum_probs=57.9
Q ss_pred HHHHHHHHcCCCEEEe------cCcCChhhHHHHHHH-HhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAM------SFVCDADSVRHLKKY-VSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~------SfV~sa~dv~~ir~~-l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.++|.++.|+|+|++ ++.-|.++=.++-+. .+..+ .++.||+-+= +.++++......+. +|++|+.+
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLAD-GRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVT 104 (292)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhC-CCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECC
Confidence 5567888999999986 334455555555444 33333 4678988884 36666655555554 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+...-+.| +.+.+.|+++-
T Consensus 105 P~y~~-~s~~~l~~~f~~i---a~a~~lPiilY 133 (292)
T 2ojp_A 105 PYYNR-PSQEGLYQHFKAI---AEHTDLPQILY 133 (292)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HTTCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 44311 1223333333333 44557899874
No 168
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=62.05 E-value=26 Score=36.14 Aligned_cols=97 Identities=19% Similarity=0.203 Sum_probs=60.4
Q ss_pred HHHHHHHHcCCCEEEec------CcCChhhHHHHHHHH-hccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAMS------FVCDADSVRHLKKYV-SGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S------fV~sa~dv~~ir~~l-~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.++|.++.|+|+|++. +.-|.++=.++-+.. +..+ .++.||+-+= +.++++......+. +|++|+.+
T Consensus 56 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 134 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVD-RRVPVLIGTGGTNARETIELSQHAQQAGADGIVVIN 134 (343)
T ss_dssp HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 55578889999999763 444555555554443 3333 4688988884 47777776666665 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+...-+.| +.+.+.|+++.
T Consensus 135 P~Y~~-~s~~~l~~~f~~V---A~a~~lPiilY 163 (343)
T 2v9d_A 135 PYYWK-VSEANLIRYFEQV---ADSVTLPVMLY 163 (343)
T ss_dssp CSSSC-CCHHHHHHHHHHH---HHTCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 54321 1223333333333 55568999975
No 169
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=62.03 E-value=30 Score=34.94 Aligned_cols=99 Identities=8% Similarity=-0.009 Sum_probs=59.7
Q ss_pred HHHHHHHHcCCCEEEec------CcCChhhHHHHHHHHhccCCCCceEEeee---cCHHHHhcHHHHHhc-CCEEEEeCC
Q 008172 269 DDIEFGIAEGVDFIAMS------FVCDADSVRHLKKYVSGKSSRSIKVLAKI---ENLESLQKFEEIVEA-SDGIMVARG 338 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S------fV~sa~dv~~ir~~l~~~~~~~i~IIaKI---Et~~av~nldeI~~~-sDgImIaRG 338 (575)
+.++|.++.|+|+|++. +--|.++=.++-+...+.-..++.||+-+ -+.++++......+. +|++|+-+-
T Consensus 39 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 118 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTP 118 (307)
T ss_dssp HHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 45567888999999763 33455555555444433322568888877 456666666666665 899999533
Q ss_pred CC-CCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 339 DL-GVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 339 DL-g~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
.. ......+.+...-+.| +.+.+.|+++.
T Consensus 119 ~y~~~~~s~~~l~~~f~~i---a~a~~lPiilY 148 (307)
T 3s5o_A 119 CYYRGRMSSAALIHHYTKV---ADLSPIPVVLY 148 (307)
T ss_dssp CTTGGGCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CcCCCCCCHHHHHHHHHHH---HhhcCCCEEEE
Confidence 22 1112223344444444 45568999975
No 170
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=61.12 E-value=9.7 Score=38.02 Aligned_cols=148 Identities=11% Similarity=0.085 Sum_probs=86.4
Q ss_pred CCCCccCHHH-HHHHHHc--CCCEEEecCcCChhhHHHHHHHHhccCCC-CceEEeeecCHHHHhcHHHH-------Hh-
Q 008172 261 PTLSKKDWDD-IEFGIAE--GVDFIAMSFVCDADSVRHLKKYVSGKSSR-SIKVLAKIENLESLQKFEEI-------VE- 328 (575)
Q Consensus 261 p~lsekD~~d-i~~al~~--gvd~I~~SfV~sa~dv~~ir~~l~~~~~~-~i~IIaKIEt~~av~nldeI-------~~- 328 (575)
|..|+.|++. ++.|.+. |++.|+++ +..+..+++.+...+ . .++|-+-|=-|.|-.+.+.. ++
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV~----p~~v~~a~~~L~~~g-~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~ 97 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICIY----PRFIPIARKTLKEQG-TPEIRIATVTNFPHGNDDIDIALAETRAAIAY 97 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEECC----GGGHHHHHHHHHHTT-CTTSEEEEEESTTTCCSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEC----HHHHHHHHHHhhhcC-CCCceEEEEeCCCCCCCcHHHHHHHHHHHHHc
Confidence 4556666533 3456667 78888754 567777788786323 2 57787777444443333222 11
Q ss_pred cCCEEEEe--CCCCCCCCCCCChHHHHHHHHHHHHHcCCCE--EEehhhHHhhhcCCCCChhh-HhhHHH-HHHcccceE
Q 008172 329 ASDGIMVA--RGDLGVDIPLEQIPTVQEIIIHVCRQLNKPV--IVASQLLESMVEYPTPTRAE-VADVSE-AVRQYADAL 402 (575)
Q Consensus 329 ~sDgImIa--RGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPv--ivaTq~LeSM~~~p~PtrAE-v~Dv~n-av~~G~D~v 402 (575)
=+|.|-+- .|-| .+=..+.+..-.+.+.++|..+|+|+ |+.|-.| +..| +..... ++..|+|.|
T Consensus 98 GAdEIDmVinig~l-~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~d~e~i~~a~~ia~eaGADfV 167 (260)
T 1p1x_A 98 GADEVDVVFPYRAL-MAGNEQVGFDLVKACKEACAAANVLLKVIIETGEL---------KDEALIRKASEISIKAGADFI 167 (260)
T ss_dssp TCSEEEEECCHHHH-HTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHH---------CSHHHHHHHHHHHHHTTCSEE
T ss_pred CCCEEEEeccHHhh-hCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccC---------CcHHHHHHHHHHHHHhCCCEE
Confidence 25665221 1111 00012445555567778888778885 7777666 4455 333333 778999998
Q ss_pred EeccCcCCCCC----HHHHHHHHHHHHHH
Q 008172 403 MLSGESAIGPF----GQKAVSVLQMASSR 427 (575)
Q Consensus 403 mLs~ETa~G~y----PveaV~~m~~I~~~ 427 (575)
=-| .|.. -+|.|+.|++.+++
T Consensus 168 KTS----TGf~~~gAt~e~v~lm~~~I~~ 192 (260)
T 1p1x_A 168 KTS----TGKVAVNATPESARIMMEVIRD 192 (260)
T ss_dssp ECC----CSCSSCCCCHHHHHHHHHHHHH
T ss_pred EeC----CCCCCCCCCHHHHHHHHHHHHH
Confidence 765 3443 46899999988654
No 171
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=61.00 E-value=25 Score=35.74 Aligned_cols=97 Identities=14% Similarity=0.213 Sum_probs=58.2
Q ss_pred HHHHHHHHcCCCEEEec------CcCChhhHHHHHHH-HhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAMS------FVCDADSVRHLKKY-VSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S------fV~sa~dv~~ir~~-l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.+++.++.|+|+|++. +-=|.++=.++-+. ++..+ .++.||+-+= +.++++......+. +|++|+-+
T Consensus 47 ~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 47 NFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVA-KRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp HHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhC-CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 45568889999999752 22344444444443 33333 4678888773 56666666666666 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+...-+.| +.+.+.|+++-
T Consensus 126 P~y~~-~~~~~l~~~f~~v---a~a~~lPiilY 154 (315)
T 3si9_A 126 PYYNR-PNQRGLYTHFSSI---AKAISIPIIIY 154 (315)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHcCCCCEEEE
Confidence 44321 1223333333444 45568999985
No 172
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=60.46 E-value=1.2e+02 Score=31.18 Aligned_cols=124 Identities=13% Similarity=0.131 Sum_probs=66.3
Q ss_pred CCCccCHHHH--------HHHHHcCCCEEEe-------------cCcCChhh------------HHHHHHHHhccCCCCc
Q 008172 262 TLSKKDWDDI--------EFGIAEGVDFIAM-------------SFVCDADS------------VRHLKKYVSGKSSRSI 308 (575)
Q Consensus 262 ~lsekD~~di--------~~al~~gvd~I~~-------------SfV~sa~d------------v~~ir~~l~~~~~~~i 308 (575)
.||+.|++.+ +.+.+.|+|+|=+ |..+...| +.++.+.+.+.-+++
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~- 228 (364)
T 1vyr_A 150 ALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD- 228 (364)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC-
Confidence 5777776555 4567899999987 44444333 223333232221234
Q ss_pred eEEeeecCH---H-------HHhcHHHHHhc-----CCEEEEeCCCCCCCCCCCChHHHHHHHHHH-HHHcCCCEEEehh
Q 008172 309 KVLAKIENL---E-------SLQKFEEIVEA-----SDGIMVARGDLGVDIPLEQIPTVQEIIIHV-CRQLNKPVIVASQ 372 (575)
Q Consensus 309 ~IIaKIEt~---~-------av~nldeI~~~-----sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~-c~~~gKPvivaTq 372 (575)
.|..||--. . .++..-++++. +|.|=+..+..... +... ...++. .+..+.||+....
T Consensus 229 ~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~-~~~~-----~~~~~~v~~~~~iPvi~~Gg 302 (364)
T 1vyr_A 229 RIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGG-KPYS-----EAFRQKVRERFHGVIIGAGA 302 (364)
T ss_dssp GEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBC-CCCC-----HHHHHHHHHHCCSEEEEESS
T ss_pred cEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCC-Cccc-----HHHHHHHHHHCCCCEEEECC
Confidence 577777321 1 23333233332 79998876543211 1111 123333 3345889987543
Q ss_pred hHHhhhcCCCCChhhHhhHHHHHHcc-cceEEec
Q 008172 373 LLESMVEYPTPTRAEVADVSEAVRQY-ADALMLS 405 (575)
Q Consensus 373 ~LeSM~~~p~PtrAEv~Dv~nav~~G-~D~vmLs 405 (575)
. |+. +...++..| +|+||+.
T Consensus 303 ---------i-t~~---~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 303 ---------Y-TAE---KAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp ---------C-CHH---HHHHHHHTTSCSEEEES
T ss_pred ---------c-CHH---HHHHHHHCCCccEEEEC
Confidence 2 333 445667787 9999997
No 173
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=60.33 E-value=59 Score=33.27 Aligned_cols=129 Identities=15% Similarity=0.174 Sum_probs=68.8
Q ss_pred CCCccCHHHH--------HHHHHcCCCEEEecCc-------------CChhh------------HHHHHHHHhccCCCCc
Q 008172 262 TLSKKDWDDI--------EFGIAEGVDFIAMSFV-------------CDADS------------VRHLKKYVSGKSSRSI 308 (575)
Q Consensus 262 ~lsekD~~di--------~~al~~gvd~I~~SfV-------------~sa~d------------v~~ir~~l~~~~~~~i 308 (575)
.||+.|++.+ +.|.+.|+|+|=+-.- +...| +.++.+.+.+.- +.
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v--~~ 210 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW--DG 210 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC--CS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc--CC
Confidence 6888887766 4677899999876432 22211 233333333321 34
Q ss_pred eEEeeecC----------HHHHhcHHHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHH-HcCCCEEEehhhHHh
Q 008172 309 KVLAKIEN----------LESLQKFEEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCR-QLNKPVIVASQLLES 376 (575)
Q Consensus 309 ~IIaKIEt----------~~av~nldeI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~-~~gKPvivaTq~LeS 376 (575)
.|..||-- .+.++-...+.+. +|.|-|.-|.+.-. +...-+..+..+++..+ ..+.||+....+
T Consensus 211 pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~-~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI--- 286 (340)
T 3gr7_A 211 PLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPA-RMNVYPGYQVPFAELIRREADIPTGAVGLI--- 286 (340)
T ss_dssp CEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCC-CCCCCTTTTHHHHHHHHHHTTCCEEEESSC---
T ss_pred ceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCC-CCCCCccccHHHHHHHHHHcCCcEEeeCCC---
Confidence 57778742 1223323333333 79999865543221 10011112333333333 358999986532
Q ss_pred hhcCCCCChhhHhhHHHHHHcc-cceEEec
Q 008172 377 MVEYPTPTRAEVADVSEAVRQY-ADALMLS 405 (575)
Q Consensus 377 M~~~p~PtrAEv~Dv~nav~~G-~D~vmLs 405 (575)
-|.+ +...++..| +|+|++.
T Consensus 287 ------~s~e---~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 287 ------TSGW---QAEEILQNGRADLVFLG 307 (340)
T ss_dssp ------CCHH---HHHHHHHTTSCSEEEEC
T ss_pred ------CCHH---HHHHHHHCCCeeEEEec
Confidence 2222 345677888 9999996
No 174
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=60.18 E-value=46 Score=31.17 Aligned_cols=127 Identities=15% Similarity=0.142 Sum_probs=70.2
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHH----HhcHHHHHhc-----CCEEEEeCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLES----LQKFEEIVEA-----SDGIMVARG 338 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~a----v~nldeI~~~-----sDgImIaRG 338 (575)
...++.+.+.|+|+|.+..--..+-++.+++ .+ .+.+.+..-+... .+.++.++.. .||+-+.
T Consensus 68 ~~~v~~~~~~Gad~vtvh~~~g~~~i~~~~~----~~--gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~-- 139 (208)
T 2czd_A 68 RLIARKVFGAGADYVIVHTFVGRDSVMAVKE----LG--EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAP-- 139 (208)
T ss_dssp HHHHHHHHHTTCSEEEEESTTCHHHHHHHHT----TS--EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECC--
T ss_pred HHHHHHHHhcCCCEEEEeccCCHHHHHHHHH----hC--CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEEC--
Confidence 3456677899999998877666555555443 21 3556666533322 3445555444 5776443
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHcC-CCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHH
Q 008172 339 DLGVDIPLEQIPTVQEIIIHVCRQLN-KPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKA 417 (575)
Q Consensus 339 DLg~e~~~e~v~~~Qk~Ii~~c~~~g-KPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPvea 417 (575)
......+ +++-+.+ + .++++. |--.. +-.++..++..|+|.+....--.....|.++
T Consensus 140 -------~~~~~~i-~~lr~~~---~~~~~iv~----------gGI~~-~g~~~~~~~~aGad~vvvGr~I~~a~dp~~~ 197 (208)
T 2czd_A 140 -------GTRPERI-GYIRDRL---KEGIKILA----------PGIGA-QGGKAKDAVKAGADYIIVGRAIYNAPNPREA 197 (208)
T ss_dssp -------CSSTHHH-HHHHHHS---CTTCEEEE----------CCCCS-STTHHHHHHHHTCSEEEECHHHHTSSSHHHH
T ss_pred -------CCChHHH-HHHHHhC---CCCeEEEE----------CCCCC-CCCCHHHHHHcCCCEEEEChHHhcCCCHHHH
Confidence 2222222 3333333 4 366653 22221 2224677778899999976443334568888
Q ss_pred HHHHHHH
Q 008172 418 VSVLQMA 424 (575)
Q Consensus 418 V~~m~~I 424 (575)
++.+++.
T Consensus 198 ~~~l~~~ 204 (208)
T 2czd_A 198 AKAIYDE 204 (208)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8776653
No 175
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=60.15 E-value=14 Score=35.34 Aligned_cols=128 Identities=9% Similarity=0.106 Sum_probs=65.3
Q ss_pred CH-HHHHHHHHcCCCEEEe-----cCcCChhhHHHHHHHHhccCCCCceEEe--eecCHHHHhcHHHHHhc-CCEEEEeC
Q 008172 267 DW-DDIEFGIAEGVDFIAM-----SFVCDADSVRHLKKYVSGKSSRSIKVLA--KIENLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 267 D~-~di~~al~~gvd~I~~-----SfV~sa~dv~~ir~~l~~~~~~~i~IIa--KIEt~~av~nldeI~~~-sDgImIaR 337 (575)
|. +..+...+.|+|+|-+ .|+..... ..++++.+.. ++.++. .|.+++ .+++.++. +|+|.+++
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~---~ipv~v~ggI~~~~---~~~~~l~~Gad~V~lg~ 105 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAM---DIKVELSGGIRDDD---TLAAALATGCTRVNLGT 105 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHC---SSEEEEESSCCSHH---HHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhc---CCcEEEECCcCCHH---HHHHHHHcCCCEEEECc
Confidence 54 3445667899999987 34555555 4444443322 244555 467765 36666666 99999987
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHH-hh-hcCC---CCChhhHhhHHHHHHcccceEEeccCcCCCC
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLE-SM-VEYP---TPTRAEVADVSEAVRQYADALMLSGESAIGP 412 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~Le-SM-~~~p---~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~ 412 (575)
..|.- |. .+.+..+..|..++++-.... .. ++.- .++..| .+..+...|+|.+.+++-+.-|.
T Consensus 106 ~~l~~-------p~---~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e--~~~~~~~~G~~~i~~~~~~~~~~ 173 (244)
T 1vzw_A 106 AALET-------PE---WVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYE--TLDRLNKEGCARYVVTDIAKDGT 173 (244)
T ss_dssp HHHHC-------HH---HHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHH--HHHHHHHTTCCCEEEEEC-----
T ss_pred hHhhC-------HH---HHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHH--HHHHHHhCCCCEEEEeccCcccc
Confidence 65521 22 333344455544444322110 00 0000 012222 23445678999999887655554
Q ss_pred C
Q 008172 413 F 413 (575)
Q Consensus 413 y 413 (575)
+
T Consensus 174 ~ 174 (244)
T 1vzw_A 174 L 174 (244)
T ss_dssp -
T ss_pred c
Confidence 3
No 176
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=59.94 E-value=39 Score=34.40 Aligned_cols=128 Identities=15% Similarity=0.138 Sum_probs=67.1
Q ss_pred CCCccCHHHH--------HHHHHcCCCEEEecC-------------cCCh------------hhHHHHHHHHhccCCCCc
Q 008172 262 TLSKKDWDDI--------EFGIAEGVDFIAMSF-------------VCDA------------DSVRHLKKYVSGKSSRSI 308 (575)
Q Consensus 262 ~lsekD~~di--------~~al~~gvd~I~~Sf-------------V~sa------------~dv~~ir~~l~~~~~~~i 308 (575)
.||+.|++.+ +.+.+.|+|+|=+-. .+.. .-+.++.+.+.+.- +.
T Consensus 133 ~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v--~~ 210 (338)
T 1z41_A 133 EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW--DG 210 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC--CS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc--CC
Confidence 5777775544 566789999995432 2221 12333333333331 35
Q ss_pred eEEeeecC---------H-HHHhcHHHHHhc-CCEEEEeCCCCC-CCCCCCChHHHHHHHHHHH-HHcCCCEEEehhhHH
Q 008172 309 KVLAKIEN---------L-ESLQKFEEIVEA-SDGIMVARGDLG-VDIPLEQIPTVQEIIIHVC-RQLNKPVIVASQLLE 375 (575)
Q Consensus 309 ~IIaKIEt---------~-~av~nldeI~~~-sDgImIaRGDLg-~e~~~e~v~~~Qk~Ii~~c-~~~gKPvivaTq~Le 375 (575)
.|..||-- . ++++-...+.+. +|+|-+.-|... ...+.. +..+...++.. +..+.||+....+
T Consensus 211 pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~--~~~~~~~~~~ir~~~~iPVi~~Ggi-- 286 (338)
T 1z41_A 211 PLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVF--PGYQVSFAEKIREQADMATGAVGMI-- 286 (338)
T ss_dssp CEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCC--TTTTHHHHHHHHHHHCCEEEECSSC--
T ss_pred cEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCC--ccchHHHHHHHHHHCCCCEEEECCC--
Confidence 68888722 1 223323333333 799998766432 111111 11122222222 3348999975432
Q ss_pred hhhcCCCCChhhHhhHHHHHHcc-cceEEec
Q 008172 376 SMVEYPTPTRAEVADVSEAVRQY-ADALMLS 405 (575)
Q Consensus 376 SM~~~p~PtrAEv~Dv~nav~~G-~D~vmLs 405 (575)
-|.+ |...++..| +|+|++.
T Consensus 287 -------~s~~---~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 287 -------TDGS---MAEEILQNGRADLIFIG 307 (338)
T ss_dssp -------CSHH---HHHHHHHTTSCSEEEEC
T ss_pred -------CCHH---HHHHHHHcCCceEEeec
Confidence 2333 446677888 9999996
No 177
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=59.89 E-value=59 Score=33.42 Aligned_cols=131 Identities=17% Similarity=0.154 Sum_probs=69.4
Q ss_pred CCCccCHHHH--------HHHHHcCCCEEEec---------Cc------CC----------hhhHHHHHHHHhccCCCCc
Q 008172 262 TLSKKDWDDI--------EFGIAEGVDFIAMS---------FV------CD----------ADSVRHLKKYVSGKSSRSI 308 (575)
Q Consensus 262 ~lsekD~~di--------~~al~~gvd~I~~S---------fV------~s----------a~dv~~ir~~l~~~~~~~i 308 (575)
.||+.|++.+ +.|.+.|+|+|=+- |. |+ +.-+.++.+.+.+.-+++.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 6788887766 46778999999776 32 22 1122334344433322566
Q ss_pred eEEeeecC----------HHHHhcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHH-HcCCCEEEehhhHHhh
Q 008172 309 KVLAKIEN----------LESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCR-QLNKPVIVASQLLESM 377 (575)
Q Consensus 309 ~IIaKIEt----------~~av~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~-~~gKPvivaTq~LeSM 377 (575)
.|..||-- .++++-...+-+.+|.|=+.-|...-. +...-+..+-..++..+ ..+.||+....+
T Consensus 212 pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~vd~i~vs~g~~~~~-~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi---- 286 (343)
T 3kru_A 212 PIFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNV-DINLYPGYQVKYAETIKKRCNIKTSAVGLI---- 286 (343)
T ss_dssp CEEEEEECCCSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCC-CCCCCTTTTHHHHHHHHHHHTCEEEEESSC----
T ss_pred CeEEEeechhhhccCccHHHHHHHHHHhhccccEEeccCCceEee-eecccCceeehHHHHHHHhcCcccceeeee----
Confidence 78888842 122222233333379998854543211 10001112333333333 347999975432
Q ss_pred hcCCCCChhhHhhHHHHHHcc-cceEEec
Q 008172 378 VEYPTPTRAEVADVSEAVRQY-ADALMLS 405 (575)
Q Consensus 378 ~~~p~PtrAEv~Dv~nav~~G-~D~vmLs 405 (575)
-|.+ +...++..| +|+|++.
T Consensus 287 -----~t~e---~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 287 -----TTQE---LAEEILSNERADLVALG 307 (343)
T ss_dssp -----CCHH---HHHHHHHTTSCSEEEES
T ss_pred -----eHHH---HHHHHHhchhhHHHHHH
Confidence 2222 334567787 9999996
No 178
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=59.51 E-value=37 Score=33.88 Aligned_cols=97 Identities=13% Similarity=0.168 Sum_probs=57.9
Q ss_pred HHHHHHHHcCCCEEEecCcC------ChhhHHHHHHHH-hccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAMSFVC------DADSVRHLKKYV-SGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~------sa~dv~~ir~~l-~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.+++.++.|+|+|++.=-. |.++=.++-+.. +..+ .++.||+-+= +.++++.....-+. +|++|+-+
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVAN-KRIPIIAGTGANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhC-CCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 45678889999998754321 334444443333 3333 4588888873 56666666666555 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+...-+.| +.+.+.|+++-
T Consensus 105 P~y~~-~~~~~l~~~f~~i---a~a~~lPiilY 133 (291)
T 3tak_A 105 PYYNK-PTQEGLYQHYKAI---AEAVELPLILY 133 (291)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHCCSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 54321 1223344444444 44558999985
No 179
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=59.35 E-value=31 Score=35.00 Aligned_cols=98 Identities=14% Similarity=0.096 Sum_probs=55.4
Q ss_pred HHHHHHHHcCCCEEEecC------cCChhhHHHHHHH-HhccCCCCceEEeee--cCHHHHhcHHHHHhc-CCEEEEeCC
Q 008172 269 DDIEFGIAEGVDFIAMSF------VCDADSVRHLKKY-VSGKSSRSIKVLAKI--ENLESLQKFEEIVEA-SDGIMVARG 338 (575)
Q Consensus 269 ~di~~al~~gvd~I~~Sf------V~sa~dv~~ir~~-l~~~~~~~i~IIaKI--Et~~av~nldeI~~~-sDgImIaRG 338 (575)
+.+++.++.|+|+|++.= --|.++=.++-+. ++..+ .++.||+-+ -+.++++......+. +|++|+-+-
T Consensus 37 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~-grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P 115 (316)
T 3e96_A 37 ETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVH-GRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMP 115 (316)
T ss_dssp HHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 455688899999987542 2244444444433 33333 468888887 334444444444444 899999643
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHcCCCEEEeh
Q 008172 339 DLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVAS 371 (575)
Q Consensus 339 DLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaT 371 (575)
... ..+.+.+...-+.| |.+.+.|+++.-
T Consensus 116 ~y~-~~s~~~l~~~f~~v---a~a~~lPiilYn 144 (316)
T 3e96_A 116 IHP-YVTAGGVYAYFRDI---IEALDFPSLVYF 144 (316)
T ss_dssp CCS-CCCHHHHHHHHHHH---HHHHTSCEEEEE
T ss_pred CCC-CCCHHHHHHHHHHH---HHhCCCCEEEEe
Confidence 321 11223444444444 444579999863
No 180
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=59.08 E-value=20 Score=33.42 Aligned_cols=105 Identities=21% Similarity=0.234 Sum_probs=62.4
Q ss_pred HHcCCCEEEec--C--cCChhhHHHHHHHHhccCCCCceEEe--eecCHHHHhc-HHHHHhc-CCEEEEeCCCCCCCCCC
Q 008172 275 IAEGVDFIAMS--F--VCDADSVRHLKKYVSGKSSRSIKVLA--KIENLESLQK-FEEIVEA-SDGIMVARGDLGVDIPL 346 (575)
Q Consensus 275 l~~gvd~I~~S--f--V~sa~dv~~ir~~l~~~~~~~i~IIa--KIEt~~av~n-ldeI~~~-sDgImIaRGDLg~e~~~ 346 (575)
+..|+|+|-+. | -...+.++++|+.. .+..+.+ |+.. +.+. +++..+. +|++.+. ++.
T Consensus 22 ~~~~~diie~G~p~~~~~g~~~i~~ir~~~-----~~~~i~~~~~~~~--~~~~~~~~~~~~Gad~v~v~--~~~----- 87 (211)
T 3f4w_A 22 VVDDVDIIEVGTPFLIREGVNAIKAIKEKY-----PHKEVLADAKIMD--GGHFESQLLFDAGADYVTVL--GVT----- 87 (211)
T ss_dssp HGGGCSEEEECHHHHHHHTTHHHHHHHHHC-----TTSEEEEEEEECS--CHHHHHHHHHHTTCSEEEEE--TTS-----
T ss_pred hhcCccEEEeCcHHHHhccHHHHHHHHHhC-----CCCEEEEEEEecc--chHHHHHHHHhcCCCEEEEe--CCC-----
Confidence 34699998764 3 23445566666532 1234443 4432 3344 6666666 8999994 332
Q ss_pred CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 347 EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 347 e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
....-+.+++.|+++|+++++. ++ +| .|. ...+..+...|+|.+.+.
T Consensus 88 --~~~~~~~~~~~~~~~g~~~~v~--~~-----~~-~t~--~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 88 --DVLTIQSCIRAAKEAGKQVVVD--MI-----CV-DDL--PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp --CHHHHHHHHHHHHHHTCEEEEE--CT-----TC-SSH--HHHHHHHHHHTCCEEEEE
T ss_pred --ChhHHHHHHHHHHHcCCeEEEE--ec-----CC-CCH--HHHHHHHHHcCCCEEEEc
Confidence 1233478899999999999873 11 11 122 233456778899998774
No 181
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=58.82 E-value=17 Score=37.99 Aligned_cols=49 Identities=22% Similarity=0.327 Sum_probs=38.7
Q ss_pred ceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHH
Q 008172 91 TKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQ 139 (575)
Q Consensus 91 tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~ 139 (575)
..+-+.+|......+.++.++++|++++-||.+||..+.+.+.++.+|+
T Consensus 97 l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~ 145 (366)
T 4fo4_A 97 LRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 145 (366)
T ss_dssp CCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred eeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 3455556665567999999999999999999999988766666666664
No 182
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=58.43 E-value=70 Score=34.18 Aligned_cols=88 Identities=15% Similarity=0.187 Sum_probs=50.4
Q ss_pred Cce-EEeeecCHHHHhcHHHHHhc-----CCEEEEeCCCCC--------CCCC-CCC--hHHHHHHHHHHHHHc---CCC
Q 008172 307 SIK-VLAKIENLESLQKFEEIVEA-----SDGIMVARGDLG--------VDIP-LEQ--IPTVQEIIIHVCRQL---NKP 366 (575)
Q Consensus 307 ~i~-IIaKIEt~~av~nldeI~~~-----sDgImIaRGDLg--------~e~~-~e~--v~~~Qk~Ii~~c~~~---gKP 366 (575)
+.. |+.||=---..+++.+|++. +|||.+.-+-.. .+.+ +.. +....-++++..+++ ..|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 455 89999321112245555444 799988644220 0111 111 112233555555554 789
Q ss_pred EEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEecc
Q 008172 367 VIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 367 vivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ 406 (575)
+|...-+- ...|+..++..|||+|++..
T Consensus 376 VIg~GGI~------------s~~DA~e~l~aGAd~Vqigr 403 (443)
T 1tv5_A 376 IIASGGIF------------SGLDALEKIEAGASVCQLYS 403 (443)
T ss_dssp EEEESSCC------------SHHHHHHHHHTTEEEEEESH
T ss_pred EEEECCCC------------CHHHHHHHHHcCCCEEEEcH
Confidence 99876543 34577888999999999973
No 183
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=58.20 E-value=37 Score=33.78 Aligned_cols=109 Identities=18% Similarity=0.253 Sum_probs=71.2
Q ss_pred cCHHHHHHHH-HcCCCEEEec-----CcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHh---cHHHHHhc-CCEEEE
Q 008172 266 KDWDDIEFGI-AEGVDFIAMS-----FVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQ---KFEEIVEA-SDGIMV 335 (575)
Q Consensus 266 kD~~di~~al-~~gvd~I~~S-----fV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~---nldeI~~~-sDgImI 335 (575)
.|...+..+. +.|+++|-+- |=.+.++++++|+.. ++.|+.| +.+- .+++-.+. +|+|.+
T Consensus 72 ~~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v------~lPvl~k----dfiid~~qv~~A~~~GAD~VlL 141 (272)
T 3qja_A 72 ADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV------SIPVLRK----DFVVQPYQIHEARAHGADMLLL 141 (272)
T ss_dssp -CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC------SSCEEEE----SCCCSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC------CCCEEEC----ccccCHHHHHHHHHcCCCEEEE
Confidence 4666665554 5899999763 223567888887754 2556655 1222 24444444 899999
Q ss_pred eCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEecc
Q 008172 336 ARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 336 aRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ 406 (575)
+-.||. +.-.+.+++.|++.|..+++.++ |.+| +..|...|+|.+-.++
T Consensus 142 i~a~l~--------~~~l~~l~~~a~~lGl~~lvev~-----------t~ee---~~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 142 IVAALE--------QSVLVSMLDRTESLGMTALVEVH-----------TEQE---ADRALKAGAKVIGVNA 190 (272)
T ss_dssp EGGGSC--------HHHHHHHHHHHHHTTCEEEEEES-----------SHHH---HHHHHHHTCSEEEEES
T ss_pred ecccCC--------HHHHHHHHHHHHHCCCcEEEEcC-----------CHHH---HHHHHHCCCCEEEECC
Confidence 766774 23456788999999999987542 3333 3456678999998875
No 184
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=58.02 E-value=1.1e+02 Score=33.00 Aligned_cols=152 Identities=13% Similarity=0.020 Sum_probs=95.0
Q ss_pred CCCccCHHHHH-HHHHcCCCEEEecC----cC-----ChhhHHHHHHHHhccCCCCceEEeeec--CHHHH---------
Q 008172 262 TLSKKDWDDIE-FGIAEGVDFIAMSF----VC-----DADSVRHLKKYVSGKSSRSIKVLAKIE--NLESL--------- 320 (575)
Q Consensus 262 ~lsekD~~di~-~al~~gvd~I~~Sf----V~-----sa~dv~~ir~~l~~~~~~~i~IIaKIE--t~~av--------- 320 (575)
+++..|+..|. ...+.|++.|=+-+ +. ++++.+.++.+-+.. +++++.+-+- |.-|.
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~--~~~~l~~l~R~~N~~G~~~~~ddv~~ 103 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAM--PNTPLQMLLRGQNLLGYRHYADDVVD 103 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHC--SSSCEEEEECGGGTTSSSCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhC--CCCeEEEEeccccccCcccccchhhH
Confidence 56767765554 44568999998853 21 456655555544322 3444444432 22222
Q ss_pred hcHHHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcc
Q 008172 321 QKFEEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQY 398 (575)
Q Consensus 321 ~nldeI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G 398 (575)
.+++..++. .|.|-|. ....++ .-.+..++.++++|+.|.++- ||...+.-+...+.+++. +...|
T Consensus 104 ~~v~~a~~~Gvd~i~if-------~~~sd~-~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~G 171 (464)
T 2nx9_A 104 TFVERAVKNGMDVFRVF-------DAMNDV-RNMQQALQAVKKMGAHAQGTL----CYTTSPVHNLQTWVDVAQQLAELG 171 (464)
T ss_dssp HHHHHHHHTTCCEEEEC-------CTTCCT-HHHHHHHHHHHHTTCEEEEEE----ECCCCTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCcCEEEEE-------EecCHH-HHHHHHHHHHHHCCCEEEEEE----EeeeCCCCCHHHHHHHHHHHHHCC
Confidence 234555554 6776653 222333 345688999999999986542 344445556777777777 66789
Q ss_pred cceEEeccCcCCCCCHHHHHHHHHHHHHHH
Q 008172 399 ADALMLSGESAIGPFGQKAVSVLQMASSRM 428 (575)
Q Consensus 399 ~D~vmLs~ETa~G~yPveaV~~m~~I~~~a 428 (575)
+|.+.|. +|+=+-.|-++-+++..+.++.
T Consensus 172 ad~I~l~-DT~G~~~P~~v~~lv~~l~~~~ 200 (464)
T 2nx9_A 172 VDSIALK-DMAGILTPYAAEELVSTLKKQV 200 (464)
T ss_dssp CSEEEEE-ETTSCCCHHHHHHHHHHHHHHC
T ss_pred CCEEEEc-CCCCCcCHHHHHHHHHHHHHhc
Confidence 9999997 8888889998888777775443
No 185
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=57.83 E-value=58 Score=32.87 Aligned_cols=96 Identities=16% Similarity=0.145 Sum_probs=59.2
Q ss_pred HHHHHHHHcCCCEEEec------CcCChhhHHHHHHHHhccCCCCceEEeee---cCHHHHhcHHHHHhc-CCEEEEeCC
Q 008172 269 DDIEFGIAEGVDFIAMS------FVCDADSVRHLKKYVSGKSSRSIKVLAKI---ENLESLQKFEEIVEA-SDGIMVARG 338 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S------fV~sa~dv~~ir~~l~~~~~~~i~IIaKI---Et~~av~nldeI~~~-sDgImIaRG 338 (575)
+.++|.++.|+|+|++. +--|.++=.++-+..-+.. .++.||+-+ -+.++++......+. +|++|+-+-
T Consensus 33 ~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 111 (313)
T 3dz1_A 33 RLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPP 111 (313)
T ss_dssp HHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 45578899999999774 3344555555554443433 468899887 456666666666555 899999765
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHcC--CCEEEe
Q 008172 339 DLGVDIPLEQIPTVQEIIIHVCRQLN--KPVIVA 370 (575)
Q Consensus 339 DLg~e~~~e~v~~~Qk~Ii~~c~~~g--KPviva 370 (575)
.. -.+.+.+... .-+.|.+.+ .|+++.
T Consensus 112 ~~--~~s~~~l~~~---f~~va~a~~~~lPiilY 140 (313)
T 3dz1_A 112 PS--LRTDEQITTY---FRQATEAIGDDVPWVLQ 140 (313)
T ss_dssp TT--CCSHHHHHHH---HHHHHHHHCTTSCEEEE
T ss_pred CC--CCCHHHHHHH---HHHHHHhCCCCCcEEEE
Confidence 42 1122333333 333444556 999975
No 186
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=57.74 E-value=42 Score=33.61 Aligned_cols=97 Identities=16% Similarity=0.147 Sum_probs=58.2
Q ss_pred HHHHHHHHcCCCEEEecC------cCChhhHHHHHHH-HhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAMSF------VCDADSVRHLKKY-VSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~Sf------V~sa~dv~~ir~~-l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.+++.++.|+|+|++.= --|.++=.++-+. .+..+ .++.||+-+= +.++++......+. +|++|+-+
T Consensus 32 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 32 DLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVA-KRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECC
Confidence 455688899999997632 2234444444333 33333 4688888873 56667666666666 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+.. ..-+.+.+.+.|+++-
T Consensus 111 P~y~~-~~~~~l~~---~f~~va~a~~lPiilY 139 (297)
T 3flu_A 111 PYYNK-PSQEGIYQ---HFKTIAEATSIPMIIY 139 (297)
T ss_dssp CCSSC-CCHHHHHH---HHHHHHHHCCSCEEEE
T ss_pred CCCCC-CCHHHHHH---HHHHHHHhCCCCEEEE
Confidence 44321 11233333 3334455568999985
No 187
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=56.91 E-value=1.7e+02 Score=29.50 Aligned_cols=114 Identities=15% Similarity=0.054 Sum_probs=65.3
Q ss_pred cCHHHHHHHHHcCCCEEE-ecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCC
Q 008172 266 KDWDDIEFGIAEGVDFIA-MSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVD 343 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~-~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e 343 (575)
.+.+....+.+.|.-+++ ..++ +++++.+.-+.+.+.....+.+=.-+-++.--+.++.+++. +|+|.++-|+
T Consensus 38 s~~~la~av~~aGglG~i~~~~~-~~~~l~~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~---- 112 (326)
T 3bo9_A 38 GTPTLAAAVSEAGGLGIIGSGAM-KPDDLRKAISELRQKTDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGN---- 112 (326)
T ss_dssp SCHHHHHHHHHTTSBEEEECTTC-CHHHHHHHHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSC----
T ss_pred CCHHHHHHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCC----
Confidence 456666777788875555 4443 67776655444443321111111112233333444555555 8999987552
Q ss_pred CCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccC
Q 008172 344 IPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGE 407 (575)
Q Consensus 344 ~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~E 407 (575)
| ..+++.+++.|.|++... .+.. +...+...|+|++.+++=
T Consensus 113 -p--------~~~~~~l~~~g~~v~~~v-----------~s~~---~a~~a~~~GaD~i~v~g~ 153 (326)
T 3bo9_A 113 -P--------TKYIRELKENGTKVIPVV-----------ASDS---LARMVERAGADAVIAEGM 153 (326)
T ss_dssp -C--------HHHHHHHHHTTCEEEEEE-----------SSHH---HHHHHHHTTCSCEEEECT
T ss_pred -c--------HHHHHHHHHcCCcEEEEc-----------CCHH---HHHHHHHcCCCEEEEECC
Confidence 2 245677788899998731 2333 334567789999999763
No 188
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=56.50 E-value=59 Score=33.03 Aligned_cols=31 Identities=23% Similarity=0.312 Sum_probs=23.1
Q ss_pred CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEecc
Q 008172 364 NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 364 gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ 406 (575)
+.|+|...-+- --.|+..++..|||+|++..
T Consensus 251 ~ipvia~GGI~------------~~~d~~k~l~~GAd~V~iG~ 281 (349)
T 1p0k_A 251 ASTMIASGGLQ------------DALDVAKAIALGASCTGMAG 281 (349)
T ss_dssp TSEEEEESSCC------------SHHHHHHHHHTTCSEEEECH
T ss_pred CCeEEEECCCC------------CHHHHHHHHHcCCCEEEEcH
Confidence 68888754332 24577888899999999974
No 189
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=56.35 E-value=62 Score=32.64 Aligned_cols=109 Identities=15% Similarity=0.178 Sum_probs=74.9
Q ss_pred HcCCCEEEecCcCC--------------hhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCC
Q 008172 276 AEGVDFIAMSFVCD--------------ADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLG 341 (575)
Q Consensus 276 ~~gvd~I~~SfV~s--------------a~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg 341 (575)
+.+..+|+-++... .+-++.++++..+.| +.+++-+-+.+.++-+ .+.+|.+-|+-+++
T Consensus 49 ~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~G---lp~~Tev~d~~~v~~l---~~~vd~lqIgA~~~- 121 (285)
T 3sz8_A 49 KLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARFG---VPVITDVHEAEQAAPV---AEIADVLQVPAFLA- 121 (285)
T ss_dssp HHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHC---CCEEEECCSGGGHHHH---HTTCSEEEECGGGT-
T ss_pred hheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhcC---CeEEEEeCCHHHHHHH---HHhCCEEEECcccc-
Confidence 45688888764442 356777888887776 7789988887766544 45599999986554
Q ss_pred CCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHH-cccceEEeccCcC
Q 008172 342 VDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVR-QYADALMLSGESA 409 (575)
Q Consensus 342 ~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~-~G~D~vmLs~ETa 409 (575)
.+.+ +++++-+.||||++.|.|. -|-.|+...+..+. .|.+=++|..-+.
T Consensus 122 -----~n~~-----LLr~va~~gkPVilK~G~~--------~t~~ei~~ave~i~~~Gn~~i~L~erg~ 172 (285)
T 3sz8_A 122 -----RQTD-----LVVAIAKAGKPVNVKKPQF--------MSPTQLKHVVSKCGEVGNDRVMLCERGS 172 (285)
T ss_dssp -----TCHH-----HHHHHHHTSSCEEEECCTT--------SCGGGTHHHHHHHHHTTCCCEEEEECCE
T ss_pred -----CCHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 3433 5666668999999976543 45667766666554 5887788864433
No 190
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=56.22 E-value=81 Score=31.82 Aligned_cols=110 Identities=18% Similarity=0.245 Sum_probs=74.0
Q ss_pred HHcCCCEEEecCcCC--------------hhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCC
Q 008172 275 IAEGVDFIAMSFVCD--------------ADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDL 340 (575)
Q Consensus 275 l~~gvd~I~~SfV~s--------------a~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDL 340 (575)
-+.|+.+|+-+.... .+-++.++++..+.| +.+++-+-+++.++-+++ .+|.+-|+-+++
T Consensus 45 ~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~G---lp~~tev~d~~~v~~l~~---~vd~lkIgA~~~ 118 (288)
T 3tml_A 45 EKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQLG---LPVLTDVHSIDEIEQVAS---VVDVLQTPAFLC 118 (288)
T ss_dssp HHHTCCEEEECBC--------------CHHHHHHHHHHHHHHHC---CCEEEECCSGGGHHHHHH---HCSEEEECGGGT
T ss_pred HHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcC---CeEEEEeCCHHHHHHHHH---hCCEEEECcccc
Confidence 345899888754442 356777788887776 789999888877766655 499999985554
Q ss_pred CCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHH-ccc------ceEEeccCcC
Q 008172 341 GVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVR-QYA------DALMLSGESA 409 (575)
Q Consensus 341 g~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~-~G~------D~vmLs~ETa 409 (575)
.+.+ +++++-+.||||++.|.|. -|..|+...+..+. .|. +=++|..-+.
T Consensus 119 ------~n~~-----LLr~~a~~gkPVilK~G~~--------~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~ 175 (288)
T 3tml_A 119 ------RQTD-----FIHACARSGKPVNIKKGQF--------LAPHDMKNVIDKARDAAREAGLSEDRFMACERGV 175 (288)
T ss_dssp ------TCHH-----HHHHHHTSSSCEEEECCTT--------CCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCE
T ss_pred ------cCHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCC
Confidence 4444 3455668999999976553 35667766666554 465 5577764333
No 191
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=55.55 E-value=2.1e+02 Score=30.32 Aligned_cols=153 Identities=12% Similarity=0.132 Sum_probs=92.7
Q ss_pred CCCccCHHHHHHH-HHcCCCEEEec-CcCChhhHHHHHHHHhccCCCCceEEeee-cCHHHHhcHHHHHhc-CCEE--EE
Q 008172 262 TLSKKDWDDIEFG-IAEGVDFIAMS-FVCDADSVRHLKKYVSGKSSRSIKVLAKI-ENLESLQKFEEIVEA-SDGI--MV 335 (575)
Q Consensus 262 ~lsekD~~di~~a-l~~gvd~I~~S-fV~sa~dv~~ir~~l~~~~~~~i~IIaKI-Et~~av~nldeI~~~-sDgI--mI 335 (575)
.+|..|+-.|-.. .+.|+|.|=+. ...++.|...++.+.. .+ ....+.+-+ .+.+++ +..++. .|.| ++
T Consensus 57 ~~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~~-~~-~~~~v~~~~r~~~~di---~~A~~aG~~~V~i~~ 131 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAICK-LG-LKCKILTHIRCHMDDA---RVAVETGVDGVDVVI 131 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHT-SC-CSSEEEEEEESCHHHH---HHHHHTTCSEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHHh-cC-CCCEEEEeeccChhhH---HHHHHcCCCEEEEEe
Confidence 4666776555544 56899999884 4567777777776553 33 345555432 344443 333333 5554 33
Q ss_pred eCCCCCC----CCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEeccCcCC
Q 008172 336 ARGDLGV----DIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLSGESAI 410 (575)
Q Consensus 336 aRGDLg~----e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs~ETa~ 410 (575)
+-.|+-. ....+.+.....+.++.++++|..|.+... ..-+.+...+.+++. +...|+|.+.|. +|.=
T Consensus 132 s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e------da~r~d~~~~~~v~~~~~~~Ga~~i~l~-DTvG 204 (423)
T 3ivs_A 132 GTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE------DSFRSDLVDLLSLYKAVDKIGVNRVGIA-DTVG 204 (423)
T ss_dssp EC-------------CHHHHHHHHHHHHHHTTTCEEEEEEE------SGGGSCHHHHHHHHHHHHHHCCSEEEEE-ETTS
T ss_pred eccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc------cCcCCCHHHHHHHHHHHHHhCCCccccC-CccC
Confidence 4444322 233456666667899999999999987532 112344455666666 456899999997 8888
Q ss_pred CCCHHHHHHHHHHHHH
Q 008172 411 GPFGQKAVSVLQMASS 426 (575)
Q Consensus 411 G~yPveaV~~m~~I~~ 426 (575)
.-.|-+.-++++.+..
T Consensus 205 ~~~P~~v~~lv~~l~~ 220 (423)
T 3ivs_A 205 CATPRQVYDLIRTLRG 220 (423)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHh
Confidence 8889888777766654
No 192
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=55.28 E-value=53 Score=32.78 Aligned_cols=101 Identities=15% Similarity=0.199 Sum_probs=61.5
Q ss_pred cCH-HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeee---------cCHHHHhcHHHHHhcCCEEEE
Q 008172 266 KDW-DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKI---------ENLESLQKFEEIVEASDGIMV 335 (575)
Q Consensus 266 kD~-~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKI---------Et~~av~nldeI~~~sDgImI 335 (575)
.|. +.+..|.+.|++.++++-+ +.++.+.+.++..+.......+++-+ .+.+.++.+++.++....+-|
T Consensus 17 ~d~~~vl~~a~~~gV~~~v~~g~-~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~vvaI 95 (287)
T 3rcm_A 17 DQQAAIVERALEAGVTQMLLTGT-SLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRAV 95 (287)
T ss_dssp TCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTTEEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEecC-CHHHHHHHHHHHHhCCCCCceEEEEEEECcCccccCCHHHHHHHHHHhcCCCeEEE
Confidence 455 4567888999999887744 67777777776654321112244333 122345566666654444444
Q ss_pred eCCCCCCCCCCC-ChHHHHH----HHHHHHHHcCCCEEE
Q 008172 336 ARGDLGVDIPLE-QIPTVQE----IIIHVCRQLNKPVIV 369 (575)
Q Consensus 336 aRGDLg~e~~~e-~v~~~Qk----~Ii~~c~~~gKPviv 369 (575)
|..|+++... .-...|+ +.++.|++.|+||++
T Consensus 96 --GEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~i 132 (287)
T 3rcm_A 96 --GECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFL 132 (287)
T ss_dssp --EEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred --EEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 6777666432 2234554 678889999999998
No 193
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=55.26 E-value=59 Score=33.78 Aligned_cols=131 Identities=21% Similarity=0.210 Sum_probs=71.9
Q ss_pred CccCHHHHHHH---HHcCCCEEEecC----------cCChhhHHHHHHHHhcc-C----CCCceEEeeecCHHHHhcHHH
Q 008172 264 SKKDWDDIEFG---IAEGVDFIAMSF----------VCDADSVRHLKKYVSGK-S----SRSIKVLAKIENLESLQKFEE 325 (575)
Q Consensus 264 sekD~~di~~a---l~~gvd~I~~Sf----------V~sa~dv~~ir~~l~~~-~----~~~i~IIaKIEt~~av~nlde 325 (575)
|+.+.+|...+ +...+|+|-+.+ .++++.+.++-+.+.+. . ..++.|+.||=--...+++.+
T Consensus 159 t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ 238 (367)
T 3zwt_A 159 SVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKED 238 (367)
T ss_dssp CSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHH
T ss_pred CCcCHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHH
Confidence 44566666543 334589987643 34556666655544321 0 024789999932111234555
Q ss_pred HHhc-----CCEEEEe-----CCCC-----CCCCC-C--CCh-HHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCC
Q 008172 326 IVEA-----SDGIMVA-----RGDL-----GVDIP-L--EQI-PTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPT 384 (575)
Q Consensus 326 I~~~-----sDgImIa-----RGDL-----g~e~~-~--e~v-~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~Pt 384 (575)
|++. +|||.+- |-++ +.+.+ + +.+ |...+.+-+..... ..|+|....+-
T Consensus 239 ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~---------- 308 (367)
T 3zwt_A 239 IASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS---------- 308 (367)
T ss_dssp HHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC----------
T ss_pred HHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC----------
Confidence 5544 8999874 2111 11111 1 122 33333333334444 68999865433
Q ss_pred hhhHhhHHHHHHcccceEEecc
Q 008172 385 RAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 385 rAEv~Dv~nav~~G~D~vmLs~ 406 (575)
...|+..++..|+|+||+..
T Consensus 309 --s~~da~~~l~~GAd~V~vgr 328 (367)
T 3zwt_A 309 --SGQDALEKIRAGASLVQLYT 328 (367)
T ss_dssp --SHHHHHHHHHHTCSEEEESH
T ss_pred --CHHHHHHHHHcCCCEEEECH
Confidence 34577888889999999973
No 194
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=55.23 E-value=16 Score=37.98 Aligned_cols=46 Identities=22% Similarity=0.321 Sum_probs=36.2
Q ss_pred eEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHH
Q 008172 92 KMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQ 139 (575)
Q Consensus 92 kIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~ 139 (575)
.+.+-+|... .+.++.++++|++++-||++||..+.+.+.++.+|+
T Consensus 97 pvga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~ 142 (361)
T 3khj_A 97 RVGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 142 (361)
T ss_dssp CCEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHH
T ss_pred eEEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHH
Confidence 3455666543 899999999999999999999988766666666664
No 195
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=55.12 E-value=81 Score=31.99 Aligned_cols=108 Identities=10% Similarity=0.080 Sum_probs=74.5
Q ss_pred HcCCCEEEecCcCC--------------hhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCC
Q 008172 276 AEGVDFIAMSFVCD--------------ADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLG 341 (575)
Q Consensus 276 ~~gvd~I~~SfV~s--------------a~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg 341 (575)
+.++.+|+-+..+. .+-++.++++..+.| +.+++-+-+++.++-+ .+.+|.+-|+-+++
T Consensus 70 ~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~G---Lpv~Tev~D~~~v~~l---~~~vd~lkIgA~~~- 142 (298)
T 3fs2_A 70 KLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEYG---FPVLTDIHTEEQCAAV---APVVDVLQIPAFLC- 142 (298)
T ss_dssp HHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHHC---CCEEEECCSHHHHHHH---TTTCSEEEECGGGT-
T ss_pred HcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcC---CeEEEEeCCHHHHHHH---HhhCCEEEECcccc-
Confidence 45788888765553 356777888887776 7899988888776554 45599999985554
Q ss_pred CCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHH-cccceEEeccCc
Q 008172 342 VDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVR-QYADALMLSGES 408 (575)
Q Consensus 342 ~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~-~G~D~vmLs~ET 408 (575)
.+.+ +++++-+.||||++.|.|. -|..|+...+..+. .|.+=++|..-+
T Consensus 143 -----~n~~-----LLr~va~~gkPVilK~Gms--------~t~~ei~~ave~i~~~Gn~~iiL~erg 192 (298)
T 3fs2_A 143 -----RQTD-----LLIAAARTGRVVNVKKGQF--------LAPWDMKNVLAKITESGNPNVLATERG 192 (298)
T ss_dssp -----TCHH-----HHHHHHHTTSEEEEECCTT--------CCGGGHHHHHHHHHTTTCCCEEEEECC
T ss_pred -----CCHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 4444 4455668899999976542 46667766666554 477777776433
No 196
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=55.07 E-value=89 Score=30.09 Aligned_cols=111 Identities=13% Similarity=0.087 Sum_probs=69.7
Q ss_pred CccCHHHHHHH-HHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEe--eecCH-------HHHhcHHHHHhc-CCE
Q 008172 264 SKKDWDDIEFG-IAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLA--KIENL-------ESLQKFEEIVEA-SDG 332 (575)
Q Consensus 264 sekD~~di~~a-l~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIa--KIEt~-------~av~nldeI~~~-sDg 332 (575)
+..+...+..+ .+.|+.+|.+ .+.++++++|+.. ++.|+. |.+-. .-++.+++.++. +|.
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v------~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~ 104 (232)
T 3igs_A 34 KPEIVAAMALAAEQAGAVAVRI---EGIDNLRMTRSLV------SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAI 104 (232)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHHTTC------CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSE
T ss_pred CcchHHHHHHHHHHCCCeEEEE---CCHHHHHHHHHhc------CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCE
Confidence 34456555554 4679999876 5889999888754 234554 32100 123456666666 999
Q ss_pred EEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEe
Q 008172 333 IMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALML 404 (575)
Q Consensus 333 ImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmL 404 (575)
|.+.-..+ ..+ ...+++++.++++|.++++-. .|..| .-.+...|+|.+-.
T Consensus 105 V~l~~~~~---~~p----~~l~~~i~~~~~~g~~v~~~v-----------~t~ee---a~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 105 IAVDGTAR---QRP----VAVEALLARIHHHHLLTMADC-----------SSVDD---GLACQRLGADIIGT 155 (232)
T ss_dssp EEEECCSS---CCS----SCHHHHHHHHHHTTCEEEEEC-----------CSHHH---HHHHHHTTCSEEEC
T ss_pred EEECcccc---CCH----HHHHHHHHHHHHCCCEEEEeC-----------CCHHH---HHHHHhCCCCEEEE
Confidence 98863322 111 235678888899999998742 34443 35677899999953
No 197
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=55.04 E-value=18 Score=37.75 Aligned_cols=50 Identities=16% Similarity=0.301 Sum_probs=40.0
Q ss_pred ceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHH
Q 008172 91 TKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQL 140 (575)
Q Consensus 91 tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~ 140 (575)
..+.+.+|+.....+.++.++++|++++=+|.+||+.+...++++.+|+.
T Consensus 142 ~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~ 191 (404)
T 1eep_A 142 LRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK 191 (404)
T ss_dssp BCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred ceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH
Confidence 44667778655568889999999999999999999887677777777754
No 198
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=54.88 E-value=36 Score=34.50 Aligned_cols=97 Identities=12% Similarity=0.119 Sum_probs=59.0
Q ss_pred HHHHHHHHcCCCEEEec------CcCChhhHHHHHHHH-hccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAMS------FVCDADSVRHLKKYV-SGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S------fV~sa~dv~~ir~~l-~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.++|.++.|+|+|++. +--|.++=.++-+.. +..+ .++.||+-+= +.++++......+. +|++|+.+
T Consensus 49 ~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 49 RSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVA-HRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 45568889999998753 233444444444433 3333 4688888874 56677766666666 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+...-+ +.+.+.+.|+++.
T Consensus 128 P~y~~-~s~~~l~~~f~---~va~a~~lPiilY 156 (315)
T 3na8_A 128 ISYWK-LNEAEVFQHYR---AVGEAIGVPVMLY 156 (315)
T ss_dssp CCSSC-CCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHH---HHHHhCCCcEEEE
Confidence 54321 12233333333 4455568999975
No 199
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=54.80 E-value=76 Score=30.33 Aligned_cols=137 Identities=6% Similarity=-0.018 Sum_probs=77.8
Q ss_pred HHHcCCCEEEecCcCChhhHHHHHHHHhccCCC-CceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCCCCCChHH
Q 008172 274 GIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSR-SIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVDIPLEQIPT 351 (575)
Q Consensus 274 al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~-~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e~~~e~v~~ 351 (575)
+.+.|+|++.+-..-..+.++++++.+++.|.+ ...-+..+-+. ..+.+.++++. .|-+.+.++-++-.-|.-.-+.
T Consensus 78 ~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~-~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~ 156 (221)
T 3exr_A 78 NAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDW-TYDQAQQWLDAGISQAIYHQSRDALLAGETWGEK 156 (221)
T ss_dssp HHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSC-CHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHH
T ss_pred HHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCC-CHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHH
Confidence 578999999987766667788888888766522 23344444422 34556667663 6777776665533222211111
Q ss_pred HHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHH
Q 008172 352 VQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMAS 425 (575)
Q Consensus 352 ~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~ 425 (575)
--+.+-+.| ..+.++.+.--+ +|. +...++..|+|.+....--.....|.++++.+++..
T Consensus 157 e~~~ir~~~-~~~~~i~v~gGI--------~~~-----~~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~ 216 (221)
T 3exr_A 157 DLNKVKKLI-EMGFRVSVTGGL--------SVD-----TLKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEI 216 (221)
T ss_dssp HHHHHHHHH-HHTCEEEEESSC--------CGG-----GGGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhh-cCCceEEEECCC--------CHH-----HHHHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHH
Confidence 111222223 334555553211 232 223567899999988654334567998887766543
No 200
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=54.76 E-value=21 Score=35.65 Aligned_cols=97 Identities=16% Similarity=0.204 Sum_probs=57.9
Q ss_pred HHHHHHHHcCCCEEEe------cCcCChhhHHHHHHH-HhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAM------SFVCDADSVRHLKKY-VSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~------SfV~sa~dv~~ir~~-l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
+.+++.++.|+|+|++ ++--|.++=.++-+. .+..+ .++.||+-+= +.++++.....-+. +|++|+.+
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVN-KRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVIT 104 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcC
Confidence 5557888999999986 334455555555444 33333 4678988884 47777766666665 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+...-+ +.+.+.+.|+++-
T Consensus 105 P~y~~-~s~~~l~~~f~---~ia~a~~lPiilY 133 (291)
T 3a5f_A 105 PYYNK-TTQKGLVKHFK---AVSDAVSTPIIIY 133 (291)
T ss_dssp CCSSC-CCHHHHHHHC----CTGGGCCSCEEEE
T ss_pred CCCCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 44321 11122222222 2344557898874
No 201
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=54.60 E-value=53 Score=31.32 Aligned_cols=68 Identities=13% Similarity=0.154 Sum_probs=41.4
Q ss_pred CHHH-HHHHHHcCCCEEEecCc-----CChhhHHHHHHHHhccCCCCceEEe--eecCHHHHhcHHHHHhc-CCEEEEeC
Q 008172 267 DWDD-IEFGIAEGVDFIAMSFV-----CDADSVRHLKKYVSGKSSRSIKVLA--KIENLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 267 D~~d-i~~al~~gvd~I~~SfV-----~sa~dv~~ir~~l~~~~~~~i~IIa--KIEt~~av~nldeI~~~-sDgImIaR 337 (575)
|... .+...+.|+|+|.+.-. ........++++.+.. ++.+++ .|.++ +.+++.++. +|++++++
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~---~ipvi~~ggI~~~---~~~~~~~~~Gad~V~lg~ 104 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQI---DIPFTVGGGIHDF---ETASELILRGADKVSINT 104 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTC---CSCEEEESSCCSH---HHHHHHHHTTCSEEEESH
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhC---CCCEEEeCCCCCH---HHHHHHHHcCCCEEEECh
Confidence 5443 45567899999877532 2333444555544322 345555 56665 346666666 99999987
Q ss_pred CCC
Q 008172 338 GDL 340 (575)
Q Consensus 338 GDL 340 (575)
..|
T Consensus 105 ~~l 107 (253)
T 1thf_D 105 AAV 107 (253)
T ss_dssp HHH
T ss_pred HHH
Confidence 766
No 202
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=54.56 E-value=1.1e+02 Score=29.27 Aligned_cols=143 Identities=16% Similarity=0.124 Sum_probs=77.8
Q ss_pred CCCCccCHHHH-HHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHH-------HHhc-CC
Q 008172 261 PTLSKKDWDDI-EFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEE-------IVEA-SD 331 (575)
Q Consensus 261 p~lsekD~~di-~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nlde-------I~~~-sD 331 (575)
|..|+.|.+.+ +.+.++|++.+++ +++-+...++.+. .+++.+-++.+.|....+. .++. +|
T Consensus 15 p~~t~~~i~~l~~~a~~~g~~~v~v----~~~~v~~~~~~l~-----~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Gad 85 (225)
T 1mzh_A 15 PHLSEKEIEEFVLKSEELGIYAVCV----NPYHVKLASSIAK-----KVKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQ 85 (225)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEE----CGGGHHHHHHHCS-----SSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCS
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEE----CHHHHHHHHHHhc-----CCceeeEecCCCCccchhhhHHHHHHHHHcCCC
Confidence 56677776444 5577899999874 3455666666553 3677777776666543332 2222 67
Q ss_pred EEE--EeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEeccCc
Q 008172 332 GIM--VARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLSGES 408 (575)
Q Consensus 332 gIm--IaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs~ET 408 (575)
+|= +.-|-+. ..+-..+ .+.+++.+++..|+++-. ++|+ +.-|..|+.+++. +...|+|++..|.-.
T Consensus 86 ~Id~viN~g~~~----~~~~~~~-~~~i~~v~~a~~pv~vKv-i~e~----~~l~~~~~~~~a~~a~eaGad~I~tstg~ 155 (225)
T 1mzh_A 86 ELDIVWNLSAFK----SEKYDFV-VEELKEIFRETPSAVHKV-IVET----PYLNEEEIKKAVEICIEAGADFIKTSTGF 155 (225)
T ss_dssp EEEEECCHHHHH----TTCHHHH-HHHHHHHHHTCTTSEEEE-ECCG----GGCCHHHHHHHHHHHHHHTCSEEECCCSC
T ss_pred EEEEEecHHHHh----cCChHHH-HHHHHHHHHHhcCceEEE-EEeC----CCCCHHHHHHHHHHHHHhCCCEEEECCCC
Confidence 664 2111110 0112233 344666666655876532 2332 3446667777776 456799999443211
Q ss_pred CCCCCHHHHHHHHH
Q 008172 409 AIGPFGQKAVSVLQ 422 (575)
Q Consensus 409 a~G~yPveaV~~m~ 422 (575)
..|.+-.+.++.|+
T Consensus 156 ~~gga~~~~i~~v~ 169 (225)
T 1mzh_A 156 APRGTTLEEVRLIK 169 (225)
T ss_dssp SSSCCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHH
Confidence 12334456665554
No 203
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=54.18 E-value=41 Score=34.14 Aligned_cols=98 Identities=13% Similarity=0.158 Sum_probs=57.7
Q ss_pred HHHHHHHHcCCCEEEec------CcCChhhHHHHHHH-HhccCCCCceEEeee---cCHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAMS------FVCDADSVRHLKKY-VSGKSSRSIKVLAKI---ENLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S------fV~sa~dv~~ir~~-l~~~~~~~i~IIaKI---Et~~av~nldeI~~~-sDgImIaR 337 (575)
+.++|.++.|+|+|++. +-=|.++=.++-+. ++..+ .++.||+-+ -+.++++......+. +|++|+-+
T Consensus 36 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 114 (318)
T 3qfe_A 36 RYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVG-PDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLP 114 (318)
T ss_dssp HHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHC-TTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 45568889999998764 22344444444443 33333 568888887 456666666666555 89999965
Q ss_pred CCC-CCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDL-GVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDL-g~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-.. .-....+.+...-+. .+.+.+.|+++.
T Consensus 115 P~y~~kp~~~~~l~~~f~~---ia~a~~lPiilY 145 (318)
T 3qfe_A 115 PAYFGKATTPPVIKSFFDD---VSCQSPLPVVIY 145 (318)
T ss_dssp CCC---CCCHHHHHHHHHH---HHHHCSSCEEEE
T ss_pred CcccCCCCCHHHHHHHHHH---HHhhCCCCEEEE
Confidence 422 111112333333334 445568999975
No 204
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=54.07 E-value=47 Score=36.10 Aligned_cols=95 Identities=17% Similarity=0.182 Sum_probs=56.2
Q ss_pred ChhhHHHHHHHHhccCCCCceEEee-ecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCC--CCCChHHHHHHHHHHHHH--
Q 008172 289 DADSVRHLKKYVSGKSSRSIKVLAK-IENLESLQKFEEIVEA-SDGIMVARGDLGVDI--PLEQIPTVQEIIIHVCRQ-- 362 (575)
Q Consensus 289 sa~dv~~ir~~l~~~~~~~i~IIaK-IEt~~av~nldeI~~~-sDgImIaRGDLg~e~--~~e~v~~~Qk~Ii~~c~~-- 362 (575)
+.++++++|+.. .+.|+.| +-+ .+......+. +|+|.|+ |--|..+ .... ..+..++.+++.+
T Consensus 331 ~~~~i~~lr~~~------~~PvivKgv~~---~e~A~~a~~aGad~I~vs-~hgG~~~d~~~~~-~~~l~~v~~~v~~~~ 399 (511)
T 1kbi_A 331 TWKDIEELKKKT------KLPIVIKGVQR---TEDVIKAAEIGVSGVVLS-NHGGRQLDFSRAP-IEVLAETMPILEQRN 399 (511)
T ss_dssp CHHHHHHHHHHC------SSCEEEEEECS---HHHHHHHHHTTCSEEEEC-CTTTTSSTTCCCH-HHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHh------CCcEEEEeCCC---HHHHHHHHHcCCCEEEEc-CCCCccCCCCCch-HHHHHHHHHHHHhhc
Confidence 356676766643 3568888 333 2333333334 8999994 1122222 2222 2334455555542
Q ss_pred --cCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEecc
Q 008172 363 --LNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 363 --~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ 406 (575)
...|||...-+- --.|+..++..|||+||+..
T Consensus 400 ~~~~ipVia~GGI~------------~g~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 400 LKDKLEVFVDGGVR------------RGTDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp CBTTBEEEEESSCC------------SHHHHHHHHHHTCSEEEECH
T ss_pred cCCCcEEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 268898865433 34688999999999999964
No 205
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=53.87 E-value=1.5e+02 Score=28.47 Aligned_cols=90 Identities=17% Similarity=0.171 Sum_probs=51.2
Q ss_pred HHHHHHHHHcCCCEEEe--cCcC--------------------ChhhHHHHHHHHhccCCCCceEEeee-cCHHHHhcHH
Q 008172 268 WDDIEFGIAEGVDFIAM--SFVC--------------------DADSVRHLKKYVSGKSSRSIKVLAKI-ENLESLQKFE 324 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~--SfV~--------------------sa~dv~~ir~~l~~~~~~~i~IIaKI-Et~~av~nld 324 (575)
.+.++...+.|+|+|-+ ||-. +.++..++-+.+++. -++.++.+. .++.-...++
T Consensus 35 ~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~--~~~Pv~~m~~~~~~~~~~~~ 112 (262)
T 1rd5_A 35 AEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE--LSCPVVLLSYYKPIMFRSLA 112 (262)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG--CSSCEEEECCSHHHHSCCTH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc--CCCCEEEEecCcHHHHHHHH
Confidence 45566777899999777 3321 233333333334333 235566654 2322112334
Q ss_pred HHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEE
Q 008172 325 EIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIV 369 (575)
Q Consensus 325 eI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviv 369 (575)
...+. +||+.+ .|+.. +. -+++++.|+++|.+.+.
T Consensus 113 ~a~~aGadgv~v--~d~~~----~~----~~~~~~~~~~~g~~~i~ 148 (262)
T 1rd5_A 113 KMKEAGVHGLIV--PDLPY----VA----AHSLWSEAKNNNLELVL 148 (262)
T ss_dssp HHHHTTCCEEEC--TTCBT----TT----HHHHHHHHHHTTCEECE
T ss_pred HHHHcCCCEEEE--cCCCh----hh----HHHHHHHHHHcCCceEE
Confidence 45555 899998 46543 33 45777889999988665
No 206
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=53.59 E-value=87 Score=30.14 Aligned_cols=110 Identities=11% Similarity=0.065 Sum_probs=69.0
Q ss_pred CccCHHHHHHH-HHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeee--cCH-------HHHhcHHHHHhc-CCE
Q 008172 264 SKKDWDDIEFG-IAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKI--ENL-------ESLQKFEEIVEA-SDG 332 (575)
Q Consensus 264 sekD~~di~~a-l~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKI--Et~-------~av~nldeI~~~-sDg 332 (575)
+..+...+..+ .+.|+.+|.+ .+.++++++|+.. ++.|+..+ .-. .-++.+++..+. +|.
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v------~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~ 104 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRI---EGIENLRTVRPHL------SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADI 104 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHGGGC------CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSE
T ss_pred CcchHHHHHHHHHHCCCcEEEE---CCHHHHHHHHHhc------CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCE
Confidence 34455555554 4679999886 5889998888754 23444321 100 123456666666 999
Q ss_pred EEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEE
Q 008172 333 IMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALM 403 (575)
Q Consensus 333 ImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vm 403 (575)
|.+.-..+ ..++ ..+++++.+++.|.++++-. .|..|. ..+...|+|.+-
T Consensus 105 I~l~~~~~---~~p~----~l~~~i~~~~~~g~~v~~~v-----------~t~eea---~~a~~~Gad~Ig 154 (229)
T 3q58_A 105 IAFDASFR---SRPV----DIDSLLTRIRLHGLLAMADC-----------STVNEG---ISCHQKGIEFIG 154 (229)
T ss_dssp EEEECCSS---CCSS----CHHHHHHHHHHTTCEEEEEC-----------SSHHHH---HHHHHTTCSEEE
T ss_pred EEECcccc---CChH----HHHHHHHHHHHCCCEEEEec-----------CCHHHH---HHHHhCCCCEEE
Confidence 98863322 1112 35678888899999998742 344433 567789999995
No 207
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=53.38 E-value=51 Score=29.45 Aligned_cols=39 Identities=15% Similarity=0.290 Sum_probs=23.7
Q ss_pred cccccCCCCEEEEeCC----eeEEEEEEE---ECCeEEEEEecCeE
Q 008172 200 FSEGIEVGDELVIDGG----MASFEVIEK---VGNDLRCKCTDPGV 238 (575)
Q Consensus 200 l~~~v~~Gd~IliDDG----~i~l~V~~~---~~~~i~~~V~~gG~ 238 (575)
+.++|++||.|++.|| ...-+|.++ ....++|=....|.
T Consensus 88 ~A~~l~~GD~v~~~~~~~~~~~~~~V~~v~~~~~~G~yaPlT~~Gt 133 (145)
T 1at0_A 88 FADRIEEKNQVLVRDVETGELRPQRVVKVGSVRSKGVVAPLTREGT 133 (145)
T ss_dssp EGGGCCTTCEEEEECTTTCCEEEEEEEEEEEEEEEEEEEEEESSSE
T ss_pred EHHHCcCCCEEEEecCCCCCEEEEEEEEEEEEEEeeeEccccCcEE
Confidence 6788999999999887 233344443 22335554444443
No 208
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=52.98 E-value=81 Score=31.32 Aligned_cols=96 Identities=10% Similarity=0.069 Sum_probs=59.6
Q ss_pred HHHHHHHHcCCCEEEe------cCcCChhhHHHHHHHHhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeCC
Q 008172 269 DDIEFGIAEGVDFIAM------SFVCDADSVRHLKKYVSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVARG 338 (575)
Q Consensus 269 ~di~~al~~gvd~I~~------SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaRG 338 (575)
+.++|.++.|+|+|++ ++--|.++=.++-+...+.. +. ||+-+= +.++++.....-+. +|++|+-+-
T Consensus 24 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~-~g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 100 (288)
T 2nuw_A 24 THAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVT-HK--LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSP 100 (288)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTC-SC--EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHh-CC--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 5567889999999986 34456666666655554432 22 888774 47777776666665 899999755
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 339 DLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 339 DLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
...--.+.+.+...-+ +.|.+.+.|+++-
T Consensus 101 ~y~~~~s~~~l~~~f~---~va~a~~lPiilY 129 (288)
T 2nuw_A 101 YYFPRLPEKFLAKYYE---EIARISSHSLYIY 129 (288)
T ss_dssp CSSCSCCHHHHHHHHH---HHHHHCCSCEEEE
T ss_pred cCCCCCCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 4422012233333333 4455668999985
No 209
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=52.70 E-value=1.1e+02 Score=29.83 Aligned_cols=135 Identities=10% Similarity=0.072 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeC---CCCCCCCC
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVAR---GDLGVDIP 345 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaR---GDLg~e~~ 345 (575)
.+.+.|.+.|+|+|=+. ++.-.+.++|+++ .....|-+-.-|.+-+....+ .-+|.|.+++ .+.....+
T Consensus 103 d~~~lA~~~gAdGVHLg--~~dl~~~~~r~~~----~~~~~iG~S~ht~~Ea~~A~~--~GaDyI~vgpvf~T~tK~~~~ 174 (243)
T 3o63_A 103 DRADIARAAGADVLHLG--QRDLPVNVARQIL----APDTLIGRSTHDPDQVAAAAA--GDADYFCVGPCWPTPTKPGRA 174 (243)
T ss_dssp SCHHHHHHHTCSEEEEC--TTSSCHHHHHHHS----CTTCEEEEEECSHHHHHHHHH--SSCSEEEECCSSCCCC-----
T ss_pred CHHHHHHHhCCCEEEec--CCcCCHHHHHHhh----CCCCEEEEeCCCHHHHHHHhh--CCCCEEEEcCccCCCCCCCcc
Q ss_pred CCChHHHHHHHHHHHHH--cCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHH
Q 008172 346 LEQIPTVQEIIIHVCRQ--LNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQM 423 (575)
Q Consensus 346 ~e~v~~~Qk~Ii~~c~~--~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~ 423 (575)
...+..+.+. +.. ...|++...-+ -..++..+...|+|++...+.-..-..|.++++.+..
T Consensus 175 ~~gl~~l~~~----~~~~~~~iPvvAiGGI-------------~~~ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l~~ 237 (243)
T 3o63_A 175 APGLGLVRVA----AELGGDDKPWFAIGGI-------------NAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRS 237 (243)
T ss_dssp CCCHHHHHHH----HTC---CCCEEEESSC-------------CTTTHHHHHHTTCCCEEESHHHHTCSSHHHHHHHHHH
T ss_pred hhhHHHHHHH----HHhccCCCCEEEecCC-------------CHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHH
Q ss_pred HHHHH
Q 008172 424 ASSRM 428 (575)
Q Consensus 424 I~~~a 428 (575)
...++
T Consensus 238 ~~~~~ 242 (243)
T 3o63_A 238 ALTAA 242 (243)
T ss_dssp HHHTC
T ss_pred HHHhc
No 210
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=52.65 E-value=1.3e+02 Score=30.21 Aligned_cols=110 Identities=15% Similarity=0.085 Sum_probs=62.4
Q ss_pred CHHHHHHHHHcCC-CEEEecCcCChhhHHHHHHHHhccCCCCceEEeee--cCHHHHhcHHHHHhc-CCEEEEeCCCCCC
Q 008172 267 DWDDIEFGIAEGV-DFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKI--ENLESLQKFEEIVEA-SDGIMVARGDLGV 342 (575)
Q Consensus 267 D~~di~~al~~gv-d~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKI--Et~~av~nldeI~~~-sDgImIaRGDLg~ 342 (575)
+.+....+.+.|. .+|...++ +++++.+..+.+.+.. +. .+.+.+ -++.--+.++...+. .|+|.++-|.
T Consensus 25 ~~~la~av~~aG~lG~i~~~~~-~~~~~~~~i~~i~~~~-~~-p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~--- 98 (332)
T 2z6i_A 25 DGDLAGAVSKAGGLGIIGGGNA-PKEVVKANIDKIKSLT-DK-PFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGN--- 98 (332)
T ss_dssp CHHHHHHHHHHTSBEEEECTTC-CHHHHHHHHHHHHHHC-CS-CEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSC---
T ss_pred cHHHHHHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhc-CC-CEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCC---
Confidence 5667777778886 66666665 5666554433333221 11 122222 133222233444444 8999997542
Q ss_pred CCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEecc
Q 008172 343 DIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 343 e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ 406 (575)
| ..+++.+++.|.|+++-. .+.. +...+...|+|++.+++
T Consensus 99 --p--------~~~i~~l~~~g~~v~~~v-----------~~~~---~a~~~~~~GaD~i~v~g 138 (332)
T 2z6i_A 99 --P--------SKYMERFHEAGIIVIPVV-----------PSVA---LAKRMEKIGADAVIAEG 138 (332)
T ss_dssp --G--------GGTHHHHHHTTCEEEEEE-----------SSHH---HHHHHHHTTCSCEEEEC
T ss_pred --h--------HHHHHHHHHcCCeEEEEe-----------CCHH---HHHHHHHcCCCEEEEEC
Confidence 3 235677778899999642 2222 33456678999999965
No 211
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=52.61 E-value=82 Score=32.00 Aligned_cols=114 Identities=16% Similarity=0.189 Sum_probs=69.4
Q ss_pred HHHHHHHHcCCCEEEecC---------------cCChhhHHHHHHHHhccCCCCceEEeeecCH------HHHhcHHHHH
Q 008172 269 DDIEFGIAEGVDFIAMSF---------------VCDADSVRHLKKYVSGKSSRSIKVLAKIENL------ESLQKFEEIV 327 (575)
Q Consensus 269 ~di~~al~~gvd~I~~Sf---------------V~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~------~av~nldeI~ 327 (575)
+.++...+.|+++|-+=- +...+-+..++..... + ....|+|+.|.. ++++......
T Consensus 108 ~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~-~~~~I~ARtda~~~~g~~~ai~Ra~ay~ 185 (305)
T 3ih1_A 108 RTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV-A-PSLYIVARTDARGVEGLDEAIERANAYV 185 (305)
T ss_dssp HHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-C-TTSEEEEEECCHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-C-CCeEEEEeeccccccCHHHHHHHHHHHH
Confidence 344556678998885532 1112456666665544 4 578999999986 5555555556
Q ss_pred hc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 328 EA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 328 ~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
+. +|+||+- .. +. -+.+-+.|.+...|+++ +|++- -..|.+|.+|+. ..|+.-+...
T Consensus 186 eAGAD~i~~e-------~~-~~----~~~~~~i~~~~~~P~~~--n~~~~-g~tp~~~~~eL~------~lGv~~v~~~ 243 (305)
T 3ih1_A 186 KAGADAIFPE-------AL-QS----EEEFRLFNSKVNAPLLA--NMTEF-GKTPYYSAEEFA------NMGFQMVIYP 243 (305)
T ss_dssp HHTCSEEEET-------TC-CS----HHHHHHHHHHSCSCBEE--ECCTT-SSSCCCCHHHHH------HTTCSEEEEC
T ss_pred HcCCCEEEEc-------CC-CC----HHHHHHHHHHcCCCEEE--eecCC-CCCCCCCHHHHH------HcCCCEEEEc
Confidence 65 8999993 22 22 13444556677899974 33332 123566766655 4688777653
No 212
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=52.10 E-value=1.1e+02 Score=31.72 Aligned_cols=125 Identities=11% Similarity=0.023 Sum_probs=64.4
Q ss_pred CCCccCHHHH--------HHHHHcCCCEEEe-------------cCcCChhh------------HHHHHHHHhccCCCCc
Q 008172 262 TLSKKDWDDI--------EFGIAEGVDFIAM-------------SFVCDADS------------VRHLKKYVSGKSSRSI 308 (575)
Q Consensus 262 ~lsekD~~di--------~~al~~gvd~I~~-------------SfV~sa~d------------v~~ir~~l~~~~~~~i 308 (575)
.||+.|++.+ +.|.+.|+|+|=+ |..+...| +.++.+.+.+.-+++
T Consensus 155 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~- 233 (377)
T 2r14_A 155 ALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE- 233 (377)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-
Confidence 5777777655 4567899999987 33333322 223222222211134
Q ss_pred eEEeeecC---H------HHHhcHHHHHh----c-CCEEEEeCCCCCCCCCCCChHHHHHHHHHH-HHHcCCCEEEehhh
Q 008172 309 KVLAKIEN---L------ESLQKFEEIVE----A-SDGIMVARGDLGVDIPLEQIPTVQEIIIHV-CRQLNKPVIVASQL 373 (575)
Q Consensus 309 ~IIaKIEt---~------~av~nldeI~~----~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~-c~~~gKPvivaTq~ 373 (575)
.|..||-- . ...++.-++++ . +|.|=+..|......+.+. ...++. .+..+.|||....
T Consensus 234 ~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~-----~~~~~~ik~~~~iPvi~~Gg- 307 (377)
T 2r14_A 234 RVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYP-----EGFREQMRQRFKGGLIYCGN- 307 (377)
T ss_dssp GEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCC-----TTHHHHHHHHCCSEEEEESS-
T ss_pred cEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcch-----HHHHHHHHHHCCCCEEEECC-
Confidence 68888721 1 11233333333 3 7999887654321111111 122222 3345789987542
Q ss_pred HHhhhcCCCCChhhHhhHHHHHHcc-cceEEec
Q 008172 374 LESMVEYPTPTRAEVADVSEAVRQY-ADALMLS 405 (575)
Q Consensus 374 LeSM~~~p~PtrAEv~Dv~nav~~G-~D~vmLs 405 (575)
. +. .+...++..| +|+|++.
T Consensus 308 --------i-~~---~~a~~~l~~g~aD~V~ig 328 (377)
T 2r14_A 308 --------Y-DA---GRAQARLDDNTADAVAFG 328 (377)
T ss_dssp --------C-CH---HHHHHHHHTTSCSEEEES
T ss_pred --------C-CH---HHHHHHHHCCCceEEeec
Confidence 2 32 3446677787 9999996
No 213
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=52.04 E-value=39 Score=42.97 Aligned_cols=119 Identities=15% Similarity=0.129 Sum_probs=76.9
Q ss_pred HHHHHHHHcCCCE--EEecCcCChhhHHHHHHHHhccCCCCceEEeeecC-HHHHhcHHHHHhc-CCEEE---EeCCCCC
Q 008172 269 DDIEFGIAEGVDF--IAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIEN-LESLQKFEEIVEA-SDGIM---VARGDLG 341 (575)
Q Consensus 269 ~di~~al~~gvd~--I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt-~~av~nldeI~~~-sDgIm---IaRGDLg 341 (575)
+.++.+++.|++. |.+++=.- ..+++.++++..| +.++..+-+ .+|.+....+.+. +|+|+ +-=+|=|
T Consensus 657 ~~~~~~~~~gv~i~gv~~~~G~p--~~e~~~~~l~~~g---i~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaG 731 (2060)
T 2uva_G 657 PLLGRLRADGVPIEGLTIGAGVP--SIEVANEYIQTLG---IRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGG 731 (2060)
T ss_dssp HHHHHHHTTTCCEEEEEEESSCC--CHHHHHHHHHHSC---CSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSS
T ss_pred HHHHHHHHcCCCcceEeecCCCC--CHHHHHHHHHHcC---CeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCC
Confidence 6678889999999 87776431 2233455666555 455555544 3344444445555 89998 6555666
Q ss_pred CCCCCCChHHHHHHHHHHHHH-cCCCEEEehhhHHhhhcCCCCChhhHhhHHHHH-----------HcccceEEe
Q 008172 342 VDIPLEQIPTVQEIIIHVCRQ-LNKPVIVASQLLESMVEYPTPTRAEVADVSEAV-----------RQYADALML 404 (575)
Q Consensus 342 ~e~~~e~v~~~Qk~Ii~~c~~-~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav-----------~~G~D~vmL 404 (575)
-+.+.+++..-.-.++...++ .+.|+|.|..+- .-.|++.++ ..|||+|++
T Consensus 732 GH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~------------~g~~i~aaltg~ws~~~g~palGAdgV~~ 794 (2060)
T 2uva_G 732 GHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFG------------GSEDTYPYLTGSWSTKFGYPPMPFDGCMF 794 (2060)
T ss_dssp SSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCC------------SHHHHHHHHHTCGGGTTTSCCCCCSCEEE
T ss_pred CCCCcccccchHHHHHHHHHHHcCCCEEEeCCCC------------CHHHHHHHhcCcchhhcCCCCCCCCEEEE
Confidence 666655543333345555554 479999986544 345788999 899999998
No 214
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=51.85 E-value=8.5 Score=36.77 Aligned_cols=126 Identities=21% Similarity=0.325 Sum_probs=72.0
Q ss_pred cCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHH----HHHhc--CCEEEEeCCC
Q 008172 266 KDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFE----EIVEA--SDGIMVARGD 339 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nld----eI~~~--sDgImIaRGD 339 (575)
+|.++++.+++..+++|++.+. +-..+.++.+.+++++ + .++.-++..+|+.+=+ =+... .|||+=.|.-
T Consensus 17 r~~~~l~~al~s~~~~ifll~g-~i~~l~~~v~~lk~~~-K--~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk~~ 92 (192)
T 3kts_A 17 HNQKDMEKILELDLTYMVMLET-HVAQLKALVKYAQAGG-K--KVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGN 92 (192)
T ss_dssp SSSHHHHHHTTSSCCEEEECSE-ETTTHHHHHHHHHHTT-C--EEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEESCHH
T ss_pred cCHHHHHHHHcCCCCEEEEecC-cHHHHHHHHHHHHHcC-C--eEEEecCchhccCCcHHHHHHHHhCCCCCEEEeCcHH
Confidence 7889999999999999999986 4566666666666555 2 3333554444443211 11111 4555533321
Q ss_pred -------CCCCC----------CC---------------CChHHHHHHHH-HHHHHcCCCEEEehhhHHhhhcCCCCChh
Q 008172 340 -------LGVDI----------PL---------------EQIPTVQEIII-HVCRQLNKPVIVASQLLESMVEYPTPTRA 386 (575)
Q Consensus 340 -------Lg~e~----------~~---------------e~v~~~Qk~Ii-~~c~~~gKPvivaTq~LeSM~~~p~PtrA 386 (575)
+|++. .+ |-+|.+.-++| +.++..+.|+|... ++ -
T Consensus 93 ~i~~Ak~~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiLPGi~p~iI~~i~~~~~~PiIaGG-lI--------~--- 160 (192)
T 3kts_A 93 AIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGG-LI--------E--- 160 (192)
T ss_dssp HHHHHHHTTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEECTTCHHHHHHHHHHHCCCEEEES-SC--------C---
T ss_pred HHHHHHHCCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEECCchhHHHHHHHHHhcCCCEEEEC-Cc--------C---
Confidence 11100 00 11111112333 33556799988743 22 1
Q ss_pred hHhhHHHHHHcccceEEeccC
Q 008172 387 EVADVSEAVRQYADALMLSGE 407 (575)
Q Consensus 387 Ev~Dv~nav~~G~D~vmLs~E 407 (575)
.-.||.+|+..|||+|.-|..
T Consensus 161 ~~edv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 161 TSEQVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp SHHHHHHHHTTTEEEEEECCG
T ss_pred CHHHHHHHHHcCCeEEEeCCH
Confidence 356889999999999998754
No 215
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=51.49 E-value=23 Score=35.37 Aligned_cols=125 Identities=12% Similarity=0.080 Sum_probs=64.7
Q ss_pred HHHHHHHHcCCC---EEEecCc-----------CChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-----
Q 008172 269 DDIEFGIAEGVD---FIAMSFV-----------CDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA----- 329 (575)
Q Consensus 269 ~di~~al~~gvd---~I~~SfV-----------~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~----- 329 (575)
+..+.+.+.|+| +|-+.|- .+.+.+.++-+.+.+.- +..|+.|+=.--..+++.++++.
T Consensus 110 ~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~--~~Pv~vK~~~~~~~~~~~~~a~~~~~aG 187 (314)
T 2e6f_A 110 AMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY--GLPFGVKMPPYFDIAHFDTAAAVLNEFP 187 (314)
T ss_dssp HHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH--CSCEEEEECCCCCHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHHHHHhcC
Confidence 334455677899 8877653 24444444444443321 35788887321112233333322
Q ss_pred -CCEEEEeCCC---CCCC-------C-------CC--CChHHHHHHHHHHHHH-c-CCCEEEehhhHHhhhcCCCCChhh
Q 008172 330 -SDGIMVARGD---LGVD-------I-------PL--EQIPTVQEIIIHVCRQ-L-NKPVIVASQLLESMVEYPTPTRAE 387 (575)
Q Consensus 330 -sDgImIaRGD---Lg~e-------~-------~~--e~v~~~Qk~Ii~~c~~-~-gKPvivaTq~LeSM~~~p~PtrAE 387 (575)
+|+|.+.-.- +.++ + ++ +.+....-..++.+++ . ..|+|...-+- .
T Consensus 188 ~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~------------~ 255 (314)
T 2e6f_A 188 LVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVY------------S 255 (314)
T ss_dssp TEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCC------------S
T ss_pred CceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCC------------C
Confidence 6788654211 0000 0 00 1122223344444444 4 78998754332 2
Q ss_pred HhhHHHHHHcccceEEeccC
Q 008172 388 VADVSEAVRQYADALMLSGE 407 (575)
Q Consensus 388 v~Dv~nav~~G~D~vmLs~E 407 (575)
..|+..++..|||+|++..-
T Consensus 256 ~~da~~~l~~GAd~V~ig~~ 275 (314)
T 2e6f_A 256 GEDAFLHILAGASMVQVGTA 275 (314)
T ss_dssp HHHHHHHHHHTCSSEEECHH
T ss_pred HHHHHHHHHcCCCEEEEchh
Confidence 34667888899999999743
No 216
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=51.29 E-value=57 Score=34.63 Aligned_cols=119 Identities=17% Similarity=0.230 Sum_probs=64.6
Q ss_pred HHcCCCEEEecC----------cCChhhHHHHHHHHhccC------------------CCCce-EEeeecCHHHHhcHHH
Q 008172 275 IAEGVDFIAMSF----------VCDADSVRHLKKYVSGKS------------------SRSIK-VLAKIENLESLQKFEE 325 (575)
Q Consensus 275 l~~gvd~I~~Sf----------V~sa~dv~~ir~~l~~~~------------------~~~i~-IIaKIEt~~av~nlde 325 (575)
+..-+|+|-+.+ -++++.+.++-+.+.+.. ..+.. |+.||=--..-+++.+
T Consensus 208 l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~ 287 (415)
T 3i65_A 208 IGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKE 287 (415)
T ss_dssp HGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHH
T ss_pred HHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHH
Confidence 334489987654 245566665544443320 02456 8999932111224555
Q ss_pred HHhc-----CCEEEEeCC-----CC---CCCCC----CCChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChh
Q 008172 326 IVEA-----SDGIMVARG-----DL---GVDIP----LEQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRA 386 (575)
Q Consensus 326 I~~~-----sDgImIaRG-----DL---g~e~~----~e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrA 386 (575)
|++. +|||.+--. |+ +.+.+ .+.-+...+.+-+..++. ..|+|...-+-
T Consensus 288 iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~------------ 355 (415)
T 3i65_A 288 IADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIF------------ 355 (415)
T ss_dssp HHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCC------------
T ss_pred HHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCC------------
Confidence 5554 799988621 11 11111 122233334443444444 58999865433
Q ss_pred hHhhHHHHHHcccceEEec
Q 008172 387 EVADVSEAVRQYADALMLS 405 (575)
Q Consensus 387 Ev~Dv~nav~~G~D~vmLs 405 (575)
-..|+..++..|||+|++.
T Consensus 356 s~eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 356 SGLDALEKIEAGASVCQLY 374 (415)
T ss_dssp SHHHHHHHHHHTEEEEEES
T ss_pred CHHHHHHHHHcCCCEEEEc
Confidence 3467788899999999996
No 217
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=51.11 E-value=88 Score=30.98 Aligned_cols=97 Identities=12% Similarity=0.155 Sum_probs=58.7
Q ss_pred HHHHHHHHHcCCCEEEec------CcCChhhHHHHHHHHhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 268 WDDIEFGIAEGVDFIAMS------FVCDADSVRHLKKYVSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~S------fV~sa~dv~~ir~~l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
.+.++|.++.|+|+|++. +--|.++=.++-+...+.. +. ||+-+= +.++++.....-+. +|++|+.+
T Consensus 22 ~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~-~g--vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~ 98 (286)
T 2r91_A 22 ANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAA-RR--VIVQVASLNADEAIALAKYAESRGAEAVASLP 98 (286)
T ss_dssp HHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHC-SS--EEEECCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHh-CC--EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 355678889999999863 4445555555554443332 22 877773 47777777666666 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...--.+.+.+...-+ +.|.+.+.|+++-
T Consensus 99 P~y~~~~s~~~l~~~f~---~va~a~~lPiilY 128 (286)
T 2r91_A 99 PYYFPRLSERQIAKYFR---DLCSAVSIPVFLY 128 (286)
T ss_dssp SCSSTTCCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CcCCCCCCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 54421012233333333 4455668999975
No 218
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=51.05 E-value=10 Score=36.88 Aligned_cols=140 Identities=16% Similarity=0.139 Sum_probs=82.6
Q ss_pred CCCCccCH-HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcH-------HHHHhc-CC
Q 008172 261 PTLSKKDW-DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKF-------EEIVEA-SD 331 (575)
Q Consensus 261 p~lsekD~-~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nl-------deI~~~-sD 331 (575)
|..|..|+ +.+..+.+.|++.|+++ +..+...++.+.. ..+.+-+-+=.+.|-.+. ++-++. +|
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v~~~~~~l~~---~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAd 86 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIP----PSYVAWVRARYPH---APFRLVTVVGFPLGYQEKEVKALEAALACARGAD 86 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECC----GGGHHHHHHHCTT---CSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCS
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhCC---CCceEEEEecCCCCCCchHHHHHHHHHHHHcCCC
Confidence 55566775 34467888999999864 4566666666642 347777777554443322 222222 67
Q ss_pred EEEEeCCCCCCCCCC------CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEe
Q 008172 332 GIMVARGDLGVDIPL------EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALML 404 (575)
Q Consensus 332 gImIaRGDLg~e~~~------e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmL 404 (575)
.|-+- +.++. +.+..-.+.+.++|...+.|||+.|-. +|..|+..... +...|+|.|=-
T Consensus 87 evd~v-----inig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~---------l~~e~i~~a~~ia~eaGADfVKT 152 (220)
T 1ub3_A 87 EVDMV-----LHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGY---------FSPEEIARLAEAAIRGGADFLKT 152 (220)
T ss_dssp EEEEE-----CCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGG---------SCHHHHHHHHHHHHHHTCSEEEC
T ss_pred EEEec-----ccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCC---------CCHHHHHHHHHHHHHhCCCEEEe
Confidence 76431 22221 223333335555555555677765543 46677766666 77889999976
Q ss_pred ccCcCCCCC----HHHHHHHHHHHH
Q 008172 405 SGESAIGPF----GQKAVSVLQMAS 425 (575)
Q Consensus 405 s~ETa~G~y----PveaV~~m~~I~ 425 (575)
| .|.. -++.|+.|++..
T Consensus 153 s----TGf~~~gat~~dv~~m~~~v 173 (220)
T 1ub3_A 153 S----TGFGPRGASLEDVALLVRVA 173 (220)
T ss_dssp C----CSSSSCCCCHHHHHHHHHHH
T ss_pred C----CCCCCCCCCHHHHHHHHHhh
Confidence 5 3333 348888888663
No 219
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=51.01 E-value=30 Score=32.87 Aligned_cols=125 Identities=14% Similarity=0.110 Sum_probs=66.0
Q ss_pred HHHHHHHHcCCCEEEec-----CcCChhhHHHHHHHHhccCCCCceEEe--eecCHHHHhcHHHHHhc-CCEEEEeCCCC
Q 008172 269 DDIEFGIAEGVDFIAMS-----FVCDADSVRHLKKYVSGKSSRSIKVLA--KIENLESLQKFEEIVEA-SDGIMVARGDL 340 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S-----fV~sa~dv~~ir~~l~~~~~~~i~IIa--KIEt~~av~nldeI~~~-sDgImIaRGDL 340 (575)
+..+...+.|+|+|-+. |...... ..++++.+.. ++.+++ .|.+++ .+++.++. +|+|++++..|
T Consensus 35 ~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~---~ipv~v~ggi~~~~---~~~~~l~~Gad~V~lg~~~l 107 (244)
T 2y88_A 35 DAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKL---DVQVELSGGIRDDE---SLAAALATGCARVNVGTAAL 107 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHC---SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhc---CCcEEEECCCCCHH---HHHHHHHcCCCEEEECchHh
Confidence 33456678999999884 5555544 4444433322 244554 566665 36666666 99999987765
Q ss_pred CCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhH----H------hhhcCCCCChhhHhhHHHHHHcccceEEeccCcCC
Q 008172 341 GVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLL----E------SMVEYPTPTRAEVADVSEAVRQYADALMLSGESAI 410 (575)
Q Consensus 341 g~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~L----e------SM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~ 410 (575)
.- |. .+.+..+..|.-++++-... . ...... ++. +..+..+...|+|.+.+++-+.-
T Consensus 108 ~~-------p~---~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~-~~~--~e~~~~~~~~G~~~i~~~~~~~~ 174 (244)
T 2y88_A 108 EN-------PQ---WCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDG-GDL--WDVLERLDSEGCSRFVVTDITKD 174 (244)
T ss_dssp HC-------HH---HHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEE-EEH--HHHHHHHHHTTCCCEEEEETTTT
T ss_pred hC-------hH---HHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCC-CCH--HHHHHHHHhCCCCEEEEEecCCc
Confidence 21 22 33333444454344332211 0 000000 011 22234455679999999876655
Q ss_pred CCC
Q 008172 411 GPF 413 (575)
Q Consensus 411 G~y 413 (575)
|.|
T Consensus 175 ~~~ 177 (244)
T 2y88_A 175 GTL 177 (244)
T ss_dssp TTT
T ss_pred ccc
Confidence 544
No 220
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=50.92 E-value=1.6e+02 Score=29.54 Aligned_cols=114 Identities=14% Similarity=0.172 Sum_probs=67.8
Q ss_pred HHHHHHHHcCCCEEEecC-----------------cCChhhHHHHHHHHhccCCCCceEEeeecCH-------HHHhcHH
Q 008172 269 DDIEFGIAEGVDFIAMSF-----------------VCDADSVRHLKKYVSGKSSRSIKVLAKIENL-------ESLQKFE 324 (575)
Q Consensus 269 ~di~~al~~gvd~I~~Sf-----------------V~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~-------~av~nld 324 (575)
+.++..++.|+.+|-+=- +...+-+..++.....+......|+++.|.. ++++...
T Consensus 98 ~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ 177 (295)
T 1s2w_A 98 RLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKRAE 177 (295)
T ss_dssp HHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHHHHH
Confidence 344555678888876522 1122446677766655433568999999874 6777777
Q ss_pred HHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcC--CCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccce
Q 008172 325 EIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLN--KPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADA 401 (575)
Q Consensus 325 eI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~g--KPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~ 401 (575)
...+. +|+||+- .+.+....+ ++ .|.+.. +|+++- |...+.++.+|+ -..|+.-
T Consensus 178 ay~eAGAd~i~~e-------~~~~~~~~~-~~---i~~~~~~~~P~i~~------~~~~~~~~~~eL------~~lGv~~ 234 (295)
T 1s2w_A 178 AYRNAGADAILMH-------SKKADPSDI-EA---FMKAWNNQGPVVIV------PTKYYKTPTDHF------RDMGVSM 234 (295)
T ss_dssp HHHHTTCSEEEEC-------CCSSSSHHH-HH---HHHHHTTCSCEEEC------CSTTTTSCHHHH------HHHTCCE
T ss_pred HHHHcCCCEEEEc-------CCCCCHHHH-HH---HHHHcCCCCCEEEe------CCCCCCCCHHHH------HHcCCcE
Confidence 77777 9999993 223322222 23 344444 899862 333344554433 3578877
Q ss_pred EEec
Q 008172 402 LMLS 405 (575)
Q Consensus 402 vmLs 405 (575)
+...
T Consensus 235 v~~~ 238 (295)
T 1s2w_A 235 VIWA 238 (295)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7653
No 221
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=50.92 E-value=17 Score=37.92 Aligned_cols=74 Identities=15% Similarity=0.212 Sum_probs=45.9
Q ss_pred CHHHHHHHHHcCCCEEEecC------------cCChhhHHHHHHH----HhccCCCCceEEeeecCHHHHhcHHHHHhc-
Q 008172 267 DWDDIEFGIAEGVDFIAMSF------------VCDADSVRHLKKY----VSGKSSRSIKVLAKIENLESLQKFEEIVEA- 329 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~Sf------------V~sa~dv~~ir~~----l~~~~~~~i~IIaKIEt~~av~nldeI~~~- 329 (575)
+.++.+.+.+.|+|+|.++. +.+.+.+.++++. +.+.+.+++.||+- -|+.+-.++++.
T Consensus 221 t~e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~----GGI~~~~dv~kal 296 (393)
T 2qr6_A 221 DYTTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIAD----GSIENSGDVVKAI 296 (393)
T ss_dssp SHHHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEEC----SSCCSHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEE----CCCCCHHHHHHHH
Confidence 46678889999999999976 3444455555554 22222123677762 234334444433
Q ss_pred ---CCEEEEeCCCCCCCC
Q 008172 330 ---SDGIMVARGDLGVDI 344 (575)
Q Consensus 330 ---sDgImIaRGDLg~e~ 344 (575)
+|++++||.=|+..-
T Consensus 297 alGA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 297 ACGADAVVLGSPLARAEE 314 (393)
T ss_dssp HHTCSEEEECGGGGGSTT
T ss_pred HcCCCEEEECHHHHcCCC
Confidence 999999998765543
No 222
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=50.74 E-value=20 Score=38.99 Aligned_cols=50 Identities=12% Similarity=0.304 Sum_probs=42.2
Q ss_pred CceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHH
Q 008172 90 KTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQ 139 (575)
Q Consensus 90 ~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~ 139 (575)
+..+-+.+|+.-...+.++.|+++|+++.=+|.+||..+...++++.+|+
T Consensus 244 rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~ 293 (511)
T 3usb_A 244 RLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRA 293 (511)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred ceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHH
Confidence 45667788887778999999999999999999999988877777777764
No 223
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=50.20 E-value=1.1e+02 Score=30.90 Aligned_cols=97 Identities=14% Similarity=0.233 Sum_probs=57.4
Q ss_pred HHHHHHHHcCCCEEEec------CcCChhhHHHHHHH-HhccCCCCceEEeeec--CHHHHhcHHHHHhc-CCEEEEeCC
Q 008172 269 DDIEFGIAEGVDFIAMS------FVCDADSVRHLKKY-VSGKSSRSIKVLAKIE--NLESLQKFEEIVEA-SDGIMVARG 338 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S------fV~sa~dv~~ir~~-l~~~~~~~i~IIaKIE--t~~av~nldeI~~~-sDgImIaRG 338 (575)
+.++|.++.|+|+|++. +--|.++=.++-+. .+..+ .++.||+-+= +.++++.....-+. +|++|+.+-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~-grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P 115 (314)
T 3d0c_A 37 DNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVN-GRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQP 115 (314)
T ss_dssp HHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhC-CCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 45568889999998753 33455555554443 33333 4688888874 45566555555554 899999654
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 339 DLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 339 DLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
...- .+.+.+...-+ +.|.+.+.|+++.
T Consensus 116 ~y~~-~s~~~l~~~f~---~va~a~~lPiilY 143 (314)
T 3d0c_A 116 VHPY-ITDAGAVEYYR---NIIEALDAPSIIY 143 (314)
T ss_dssp CCSC-CCHHHHHHHHH---HHHHHSSSCEEEE
T ss_pred CCCC-CCHHHHHHHHH---HHHHhCCCCEEEE
Confidence 3311 11233333333 4455668999984
No 224
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=50.14 E-value=2.4e+02 Score=29.37 Aligned_cols=135 Identities=16% Similarity=0.173 Sum_probs=87.7
Q ss_pred HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeee-cCH-HHHhcHHHHHhc-CCEEEEeCCCCCCCCC
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKI-ENL-ESLQKFEEIVEA-SDGIMVARGDLGVDIP 345 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKI-Et~-~av~nldeI~~~-sDgImIaRGDLg~e~~ 345 (575)
+.|+...+.|+|.|=++. .+.++++.++.+-+. -++.++|-| -+. .++. . ++. +|.+=|.||.+|-
T Consensus 50 ~Qi~~l~~aG~diVRvav-p~~~~a~al~~I~~~---~~vPlvaDiHf~~~lal~---a-~e~G~dklRINPGNig~--- 118 (366)
T 3noy_A 50 NQIKRLYEAGCEIVRVAV-PHKEDVEALEEIVKK---SPMPVIADIHFAPSYAFL---S-MEKGVHGIRINPGNIGK--- 118 (366)
T ss_dssp HHHHHHHHTTCCEEEEEC-CSHHHHHHHHHHHHH---CSSCEEEECCSCHHHHHH---H-HHTTCSEEEECHHHHSC---
T ss_pred HHHHHHHHcCCCEEEeCC-CChHHHHHHHHHHhc---CCCCEEEeCCCCHHHHHH---H-HHhCCCeEEECCcccCc---
Confidence 445566789999987775 456666666665443 258899988 333 3332 2 334 9999999999973
Q ss_pred CCChHHHHHHHHHHHHHcCCCEEEe-------hhhHHhhhcCCCCChhhH-----hhHHHHHHcccceEEeccCcCCCCC
Q 008172 346 LEQIPTVQEIIIHVCRQLNKPVIVA-------SQLLESMVEYPTPTRAEV-----ADVSEAVRQYADALMLSGESAIGPF 413 (575)
Q Consensus 346 ~e~v~~~Qk~Ii~~c~~~gKPviva-------Tq~LeSM~~~p~PtrAEv-----~Dv~nav~~G~D~vmLs~ETa~G~y 413 (575)
..--+.++++|+++|+|+=+- ..+|+.+. .||...+ ..+.-+-..|+|-+.+|--.+ -
T Consensus 119 ----~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg---~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S---~ 188 (366)
T 3noy_A 119 ----EEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYG---YPSAEALAESALRWSEKFEKWGFTNYKVSIKGS---D 188 (366)
T ss_dssp ----HHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHS---SCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECS---S
T ss_pred ----hhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHhCCCCeEEEeeecC---C
Confidence 233468999999999999874 56666553 2444332 223335667999999985443 4
Q ss_pred HHHHHHHHHHH
Q 008172 414 GQKAVSVLQMA 424 (575)
Q Consensus 414 PveaV~~m~~I 424 (575)
+..+|+.-+.+
T Consensus 189 v~~~i~ayr~l 199 (366)
T 3noy_A 189 VLQNVRANLIF 199 (366)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 55555544433
No 225
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=49.98 E-value=1e+02 Score=29.91 Aligned_cols=68 Identities=6% Similarity=0.090 Sum_probs=48.0
Q ss_pred CHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEE
Q 008172 267 DWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMV 335 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImI 335 (575)
+.+.++.+...|+|||++-.=..+.+-.+++.++.........++..|=..+.- .+..++.. .||||+
T Consensus 29 ~p~~~e~a~~~gaD~v~lDlEd~p~~~~~a~~~~~~~~~~~~~~~VRv~~~~~~-~i~~~l~~g~~gI~~ 97 (256)
T 1dxe_A 29 NPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPV-IIKRLLDIGFYNFLI 97 (256)
T ss_dssp SHHHHHHHTTSCCSEEEEESSSSSCCHHHHHHHHHHTTTCSSEEEEECSSSCHH-HHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEECCCCCHH-HHHHHHhcCCceeee
Confidence 677788889999999999876667777777777654322335678887432221 26677766 799998
No 226
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=49.53 E-value=98 Score=30.81 Aligned_cols=97 Identities=11% Similarity=0.032 Sum_probs=58.8
Q ss_pred HHHHHHHHHcCCCEEEe------cCcCChhhHHHHHHHHhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeC
Q 008172 268 WDDIEFGIAEGVDFIAM------SFVCDADSVRHLKKYVSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~------SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaR 337 (575)
.+.++|.++.|+|+|++ ++--|.++=.++-+...+.. +. ||+-+= +.++++.....-+. +|++|+-+
T Consensus 23 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~-~g--viaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 99 (293)
T 1w3i_A 23 KIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVT-NK--IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYA 99 (293)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTC-SC--EEEECCCSCHHHHHHHHHHGGGSCCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHc-CC--EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 35567888999999887 34455656666555544432 22 888773 46677666665555 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...-..+.+.+...-+. .+.+.+.|+++-
T Consensus 100 P~y~~~~s~~~l~~~f~~---va~a~~lPiilY 129 (293)
T 1w3i_A 100 PYYYPRMSEKHLVKYFKT---LCEVSPHPVYLY 129 (293)
T ss_dssp CCSCSSCCHHHHHHHHHH---HHHHCSSCEEEE
T ss_pred CCCCCCCCHHHHHHHHHH---HHhhCCCCEEEE
Confidence 544210122333333334 455568999975
No 227
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=49.34 E-value=59 Score=30.09 Aligned_cols=59 Identities=12% Similarity=0.122 Sum_probs=41.5
Q ss_pred EecCCEEEEEeecc--CCC--CCcEEEeccccccc--ccCCCCEEEEe--CCeeEEEEEEEECCeEE
Q 008172 172 VEEDSIWLFTAIKF--EGS--RPFTVKANYAGFSE--GIEVGDELVID--GGMASFEVIEKVGNDLR 230 (575)
Q Consensus 172 l~~G~~v~lt~~~~--~~~--~~~~i~v~~~~l~~--~v~~Gd~IliD--DG~i~l~V~~~~~~~i~ 230 (575)
.+.|++++|+.... ++. ......++.+.|.. .+++|+.+.+. +|.+..+|+++.++.++
T Consensus 52 m~~Ge~~~v~ippe~aYG~~~~~~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~ 118 (171)
T 2k8i_A 52 HEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVV 118 (171)
T ss_dssp CCTTCEEEEEEETTTSSCCCCTTSEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEECSSEEE
T ss_pred CCCCCEEEEEECcHHhcCCCChhhEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEEEcCCEEE
Confidence 46899998876642 231 22455667666654 58999999996 67777778998887755
No 228
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=48.86 E-value=62 Score=30.35 Aligned_cols=88 Identities=14% Similarity=0.224 Sum_probs=53.3
Q ss_pred CHHHHHHHHHcCCCEEEecCcCC--------hhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeC
Q 008172 267 DWDDIEFGIAEGVDFIAMSFVCD--------ADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~SfV~s--------a~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaR 337 (575)
+.+++..+.+.|+|+|.++.+.. +.+...++++.+..+ -.+....=| |+ +|+.+.++. +||+.+++
T Consensus 119 t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~-~pvia~GGI-~~---~nv~~~~~~Ga~gv~vgs 193 (221)
T 1yad_A 119 SLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRIS-IPVIAIGGM-TP---DRLRDVKQAGADGIAVMS 193 (221)
T ss_dssp SHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHCC-SCEEEESSC-CG---GGHHHHHHTTCSEEEESH
T ss_pred CHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCC-CCEEEECCC-CH---HHHHHHHHcCCCEEEEhH
Confidence 45667888899999999976521 223455555443322 224444556 54 577788777 89999997
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHc
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQL 363 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~ 363 (575)
+=+.. ++....-+.+.+..++.
T Consensus 194 ~i~~~----~d~~~~~~~~~~~~~~~ 215 (221)
T 1yad_A 194 GIFSS----AEPLEAARRYSRKLKEM 215 (221)
T ss_dssp HHHTS----SSHHHHHHHHHHHHHHH
T ss_pred HhhCC----CCHHHHHHHHHHHHHHh
Confidence 75432 34444455555555443
No 229
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=48.73 E-value=21 Score=37.15 Aligned_cols=63 Identities=17% Similarity=0.282 Sum_probs=40.3
Q ss_pred CHHHHHHHHHcCCCEEEecC---------cCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc----CCEE
Q 008172 267 DWDDIEFGIAEGVDFIAMSF---------VCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA----SDGI 333 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~Sf---------V~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~----sDgI 333 (575)
..++.+.+.+.|+|+|.+|. .-+.+-+.++++.+. +++.||+- -||.+-.++++. +|++
T Consensus 239 ~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~----~~ipVia~----GGI~~g~D~~kalalGAd~V 310 (368)
T 2nli_A 239 HPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVN----KRVPIVFD----SGVRRGEHVAKALASGADVV 310 (368)
T ss_dssp SHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHT----TSSCEEEC----SSCCSHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhC----CCCeEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 46778899999999999975 223344555555542 24556652 344444444444 8999
Q ss_pred EEeC
Q 008172 334 MVAR 337 (575)
Q Consensus 334 mIaR 337 (575)
||||
T Consensus 311 ~iGr 314 (368)
T 2nli_A 311 ALGR 314 (368)
T ss_dssp EECH
T ss_pred EECH
Confidence 9997
No 230
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=48.46 E-value=29 Score=35.37 Aligned_cols=73 Identities=12% Similarity=0.043 Sum_probs=46.5
Q ss_pred CHHHHHHHHHcCCCEEEecCcCC-----h-h--------hHHHHHHHHhccCCCCceEEe--eecCHHHHhcHHHHHhcC
Q 008172 267 DWDDIEFGIAEGVDFIAMSFVCD-----A-D--------SVRHLKKYVSGKSSRSIKVLA--KIENLESLQKFEEIVEAS 330 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~SfV~s-----a-~--------dv~~ir~~l~~~~~~~i~IIa--KIEt~~av~nldeI~~~s 330 (575)
+.++.+.+.+.|+|+|.+|.--- . . .+..+.+..... ++.||+ -|-+.+-+ +..+..=+
T Consensus 159 s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~---~ipVIa~GGI~~g~Dv--~kalalGA 233 (336)
T 1ypf_A 159 TPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA---SKPIIADGGIRTNGDV--AKSIRFGA 233 (336)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC---SSCEEEESCCCSTHHH--HHHHHTTC
T ss_pred CHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHc---CCcEEEeCCCCCHHHH--HHHHHcCC
Confidence 46788999999999999964220 0 0 344444443322 477888 77665433 23333339
Q ss_pred CEEEEeCCCCCCCC
Q 008172 331 DGIMVARGDLGVDI 344 (575)
Q Consensus 331 DgImIaRGDLg~e~ 344 (575)
|++|+||.=|+.+-
T Consensus 234 daV~iGr~~l~t~E 247 (336)
T 1ypf_A 234 TMVMIGSLFAGHEE 247 (336)
T ss_dssp SEEEESGGGTTCTT
T ss_pred CEEEeChhhhcccc
Confidence 99999999996544
No 231
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=48.41 E-value=21 Score=38.61 Aligned_cols=50 Identities=18% Similarity=0.242 Sum_probs=40.3
Q ss_pred ceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHH
Q 008172 91 TKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQL 140 (575)
Q Consensus 91 tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~ 140 (575)
-.+.+.+|......+.++.++++|+++.=||++||......++++.+|+.
T Consensus 244 l~vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~ 293 (514)
T 1jcn_A 244 LLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK 293 (514)
T ss_dssp BCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred eeeeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh
Confidence 34556677666678999999999999999999999887666777777754
No 232
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=47.94 E-value=98 Score=35.28 Aligned_cols=100 Identities=18% Similarity=0.240 Sum_probs=71.7
Q ss_pred ccCHHHHHHHHHcCCCEEEe-------------------cCcCCh--hhHHHHHHHHhccCCCCceEEeeecCHHHHh--
Q 008172 265 KKDWDDIEFGIAEGVDFIAM-------------------SFVCDA--DSVRHLKKYVSGKSSRSIKVLAKIENLESLQ-- 321 (575)
Q Consensus 265 ekD~~di~~al~~gvd~I~~-------------------SfV~sa--~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~-- 321 (575)
+.-+..|+||.++|+++|.+ +|++-- -|+.+|.+|-+++| +.||.--|+..++.
T Consensus 371 e~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKG---V~iilw~~t~~~~~n~ 447 (738)
T 2d73_A 371 ANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKG---IKMMMHHETSASVRNY 447 (738)
T ss_dssp HHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTT---CEEEEEEECTTBHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCC---CEEEEEEcCCCchhhH
Confidence 34478899999999999999 221111 24999999998876 89999999987444
Q ss_pred --cHHHHHhc-----CCEEEEeCCCCCCCCCC------CChHHHHHHHHHHHHHcCCCEEE
Q 008172 322 --KFEEIVEA-----SDGIMVARGDLGVDIPL------EQIPTVQEIIIHVCRQLNKPVIV 369 (575)
Q Consensus 322 --nldeI~~~-----sDgImIaRGDLg~e~~~------e~v~~~Qk~Ii~~c~~~gKPviv 369 (575)
++|+.++. ..||-++ -+|-=++- ..+.....++++.|.+++.-|..
T Consensus 448 e~~~d~~f~~~~~~Gv~GVKvd--F~g~~~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnf 506 (738)
T 2d73_A 448 ERHMDKAYQFMADNGYNSVKSG--YVGNIIPRGEHHYGQWMNNHYLYAVKKAADYKIMVNA 506 (738)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEE--CCSSCBSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEeC--ccccCcCCcccccchHHHHHHHHHHHHHHHcCcEEEc
Confidence 45666665 7888875 11111122 33667778999999999988875
No 233
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=47.49 E-value=15 Score=37.15 Aligned_cols=146 Identities=15% Similarity=0.139 Sum_probs=84.1
Q ss_pred CCCCccCHHH-HHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHH-------HHHhc-CC
Q 008172 261 PTLSKKDWDD-IEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFE-------EIVEA-SD 331 (575)
Q Consensus 261 p~lsekD~~d-i~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nld-------eI~~~-sD 331 (575)
|..|+.|++. +..|.+.|+..|+++ +..+..+++.+.. ..++|.+=|=-+.|-...+ +-++. +|
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~----P~~V~~a~~~L~~---s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAd 141 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR----PDYVSRAVQYLQG---TQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGAS 141 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHTTT---SSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCS
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHcCC---CCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCC
Confidence 5667777644 467889999999985 6788888888843 3466766665444433222 22222 55
Q ss_pred EEEEeCCCCCCCCCC---CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEeccC
Q 008172 332 GIMVARGDLGVDIPL---EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLSGE 407 (575)
Q Consensus 332 gImIaRGDLg~e~~~---e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs~E 407 (575)
.|=+ -+.++. .+-..+.+.|-+.+...+.|+. --+||+ ...|..|+..... +...|+|.|=-|
T Consensus 142 EIDm-----VINig~lk~g~~~~v~~eI~~V~~a~~~~~l--KVIlEt----~~Lt~eei~~A~~ia~eaGADfVKTS-- 208 (288)
T 3oa3_A 142 ELDM-----VMNYPWLSEKRYTDVFQDIRAVRLAAKDAIL--KVILET----SQLTADEIIAGCVLSSLAGADYVKTS-- 208 (288)
T ss_dssp EEEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEE--EEECCG----GGCCHHHHHHHHHHHHHTTCSEEECC--
T ss_pred EEEE-----EeehhhhcCCcHHHHHHHHHHHHHHhcCCCc--eEEEEC----CCCCHHHHHHHHHHHHHcCCCEEEcC--
Confidence 5532 122332 3334444444444444444421 113333 2346777665554 678899999776
Q ss_pred cCC--CCCHHHHHHHHHHHHH
Q 008172 408 SAI--GPFGQKAVSVLQMASS 426 (575)
Q Consensus 408 Ta~--G~yPveaV~~m~~I~~ 426 (575)
|-. |.--++.|+.|+++++
T Consensus 209 TGf~~~GAT~edv~lmr~~v~ 229 (288)
T 3oa3_A 209 TGFNGPGASIENVSLMSAVCD 229 (288)
T ss_dssp CSSSSCCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHH
Confidence 322 2334678999998864
No 234
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=47.19 E-value=2e+02 Score=28.77 Aligned_cols=129 Identities=9% Similarity=0.068 Sum_probs=0.0
Q ss_pred CCccCHHHHHHHHHcCCCEEEecC-------------cCChhhHHHHHHHHhccCCCCceEEeeecC-------HHHHhc
Q 008172 263 LSKKDWDDIEFGIAEGVDFIAMSF-------------VCDADSVRHLKKYVSGKSSRSIKVLAKIEN-------LESLQK 322 (575)
Q Consensus 263 lsekD~~di~~al~~gvd~I~~Sf-------------V~sa~dv~~ir~~l~~~~~~~i~IIaKIEt-------~~av~n 322 (575)
+|--|.---+.+-+.|+|.|.+.. -=+.+++...-+.+.+.. +...|++=++- .++++|
T Consensus 22 ~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~-~~~~vvaD~pfgsy~~s~~~a~~n 100 (275)
T 1o66_A 22 LTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGA-KNAMIVSDLPFGAYQQSKEQAFAA 100 (275)
T ss_dssp EECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-SSSEEEEECCTTSSSSCHHHHHHH
T ss_pred EeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhC-CCCeEEEECCCCCccCCHHHHHHH
Q ss_pred HHHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEE-------EehhhHHhhhcCCCCChhh--HhhHH
Q 008172 323 FEEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVI-------VASQLLESMVEYPTPTRAE--VADVS 392 (575)
Q Consensus 323 ldeI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvi-------vaTq~LeSM~~~p~PtrAE--v~Dv~ 392 (575)
...+++. +++|-+-=| ..+...|+++.++|.||+ =..+.+....-..+..+++ +.|.-
T Consensus 101 a~rl~kaGa~aVklEdg------------~e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~ 168 (275)
T 1o66_A 101 AAELMAAGAHMVKLEGG------------VWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAK 168 (275)
T ss_dssp HHHHHHTTCSEEEEECS------------GGGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCc------------HHHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHH
Q ss_pred HHHHcccceEEe
Q 008172 393 EAVRQYADALML 404 (575)
Q Consensus 393 nav~~G~D~vmL 404 (575)
.....|+|+++|
T Consensus 169 a~~eAGA~~ivl 180 (275)
T 1o66_A 169 AHDDAGAAVVLM 180 (275)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHHcCCcEEEE
No 235
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=47.14 E-value=2.6e+02 Score=28.88 Aligned_cols=155 Identities=17% Similarity=0.168 Sum_probs=95.1
Q ss_pred CCCCccCHHHHHHH-HHcCCCEEEecC-cCChhhHHHHHHHHhccCCCCceEEeee-cCHHHHhcHHHHHhc-CCEEE--
Q 008172 261 PTLSKKDWDDIEFG-IAEGVDFIAMSF-VCDADSVRHLKKYVSGKSSRSIKVLAKI-ENLESLQKFEEIVEA-SDGIM-- 334 (575)
Q Consensus 261 p~lsekD~~di~~a-l~~gvd~I~~Sf-V~sa~dv~~ir~~l~~~~~~~i~IIaKI-Et~~av~nldeI~~~-sDgIm-- 334 (575)
..++..|+..|-.. .+.|+|.|=+.| ..++.+.+.++.+. +.+ ....+.+-. .+.+ +++..++. .|.|-
T Consensus 20 ~~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~-~~~-~~~~v~~~~r~~~~---di~~a~~~g~~~v~i~ 94 (382)
T 2ztj_A 20 ANFSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLA-SLG-LKAKVVTHIQCRLD---AAKVAVETGVQGIDLL 94 (382)
T ss_dssp CCCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHH-TSC-CSSEEEEEEESCHH---HHHHHHHTTCSEEEEE
T ss_pred CCcCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHHHH-hcC-CCcEEEEEcccChh---hHHHHHHcCCCEEEEE
Confidence 35677777666544 468999999976 45666666666544 333 335554432 1222 34444444 56443
Q ss_pred EeCCCCCCC---CCCCChHHHHHHHHHHHHHcC--CCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcC
Q 008172 335 VARGDLGVD---IPLEQIPTVQEIIIHVCRQLN--KPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESA 409 (575)
Q Consensus 335 IaRGDLg~e---~~~e~v~~~Qk~Ii~~c~~~g--KPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa 409 (575)
++--|+-.. +..+++....+..++.++++| ..|.+. +...++-+...+.+++.++.+-+|.+.|. +|.
T Consensus 95 ~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~------~ed~~~~~~~~~~~~~~~~~~~a~~i~l~-DT~ 167 (382)
T 2ztj_A 95 FGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFS------AEDTFRSEEQDLLAVYEAVAPYVDRVGLA-DTV 167 (382)
T ss_dssp ECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEE------ETTTTTSCHHHHHHHHHHHGGGCSEEEEE-ETT
T ss_pred eccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEE------EEeCCCCCHHHHHHHHHHHHHhcCEEEec-CCC
Confidence 343342222 122444556678899999999 555543 22445666777888888666669999997 788
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 008172 410 IGPFGQKAVSVLQMASSR 427 (575)
Q Consensus 410 ~G~yPveaV~~m~~I~~~ 427 (575)
=.-.|-++-+.++.+.+.
T Consensus 168 G~~~P~~~~~lv~~l~~~ 185 (382)
T 2ztj_A 168 GVATPRQVYALVREVRRV 185 (382)
T ss_dssp SCCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHh
Confidence 888899988887777543
No 236
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=47.11 E-value=23 Score=38.26 Aligned_cols=51 Identities=18% Similarity=0.329 Sum_probs=41.8
Q ss_pred CceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHH
Q 008172 90 KTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQL 140 (575)
Q Consensus 90 ~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~ 140 (575)
+..+-+.+|......+.++.|+++|+++.=||.+||..+...++++.+|+.
T Consensus 217 rl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~ 267 (490)
T 4avf_A 217 RLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQT 267 (490)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHH
T ss_pred cceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHH
Confidence 445556778777789999999999999999999999887777777777653
No 237
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=46.98 E-value=1e+02 Score=30.22 Aligned_cols=67 Identities=18% Similarity=0.373 Sum_probs=40.9
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEE
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMV 335 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImI 335 (575)
...++.+...|+|+|++=.=.+..+...+...+.........++.+|-..+. ..+..++.. .||||+
T Consensus 27 p~~~e~a~~~g~D~vilDlEhav~~~~k~~~~l~a~~~~~~~~~VRVn~~~~-~di~~~ld~G~~gI~l 94 (261)
T 3qz6_A 27 PDIVRIYAEAGLDYFIVDCEHAAYTFREINHLVSVAKNAGVSVLVRIPQVDR-AHVQRLLDIGAEGFMI 94 (261)
T ss_dssp TTHHHHHHHTTCSEEEEESSSSCCCHHHHHHHHHHHHHHTCEEEEECSSCCH-HHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhcCCcCEEEEeccCCCCCHHHHHHHHHHHhhcCCeEEEEeCCCCH-HHHHHHHhcCCCEEEE
Confidence 4556677888999999865555555555555443211123567777755443 356666655 788887
No 238
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=46.56 E-value=65 Score=32.53 Aligned_cols=99 Identities=15% Similarity=0.096 Sum_probs=60.5
Q ss_pred HHHHHHHHHcCCCEEEecC------cCChhhHHHHHHHHhccCCCCceEEeee---cCHHHHhcHHHHHhc-C-CEEEEe
Q 008172 268 WDDIEFGIAEGVDFIAMSF------VCDADSVRHLKKYVSGKSSRSIKVLAKI---ENLESLQKFEEIVEA-S-DGIMVA 336 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~Sf------V~sa~dv~~ir~~l~~~~~~~i~IIaKI---Et~~av~nldeI~~~-s-DgImIa 336 (575)
.+.++|.++.|+|+|++.= --|.++=.++-+...+....++.||+-+ -+.++++.....-+. . |++|+.
T Consensus 31 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~ 110 (311)
T 3h5d_A 31 PALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAI 110 (311)
T ss_dssp HHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEc
Confidence 3566788999999987642 2344444454444333322568888887 366777777777775 5 999997
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 337 RGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 337 RGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
+-...- .+.+.+ .+..-+.+.+.+.|+++-
T Consensus 111 ~P~y~~-~s~~~l---~~~f~~va~a~~lPiilY 140 (311)
T 3h5d_A 111 VPYYNK-PSQEGM---YQHFKAIADASDLPIIIY 140 (311)
T ss_dssp CCCSSC-CCHHHH---HHHHHHHHHSCSSCEEEE
T ss_pred CCCCCC-CCHHHH---HHHHHHHHHhCCCCEEEE
Confidence 544321 112233 333334445568999985
No 239
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=46.30 E-value=1.1e+02 Score=29.36 Aligned_cols=101 Identities=22% Similarity=0.244 Sum_probs=61.7
Q ss_pred cCH-HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEee-e--------cC----HHHHhcHHHHHhc--
Q 008172 266 KDW-DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAK-I--------EN----LESLQKFEEIVEA-- 329 (575)
Q Consensus 266 kD~-~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaK-I--------Et----~~av~nldeI~~~-- 329 (575)
.+. +.++++.+.|+|+|=+.+..-.+++.++++.+.+.| +.+.+- . .+ .++++.+.+.++.
T Consensus 38 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~g---l~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~ 114 (287)
T 3kws_A 38 ESLNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRN---IKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAG 114 (287)
T ss_dssp SSHHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSS---CEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcC---CeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 454 567888999999999998877889999999998776 333210 0 01 2345555555544
Q ss_pred ---CCEEEEeCCCCCC--CCCC-----CChHHHHHHHHHHHHHcCCCEEE
Q 008172 330 ---SDGIMVARGDLGV--DIPL-----EQIPTVQEIIIHVCRQLNKPVIV 369 (575)
Q Consensus 330 ---sDgImIaRGDLg~--e~~~-----e~v~~~Qk~Ii~~c~~~gKPviv 369 (575)
++.|.+..|.-.. ..|. +.+...-+++.+.|.++|..+.+
T Consensus 115 ~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 164 (287)
T 3kws_A 115 ELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIF 164 (287)
T ss_dssp HTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 5777765542211 1111 22334445667777777876664
No 240
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=45.69 E-value=86 Score=31.64 Aligned_cols=121 Identities=17% Similarity=0.214 Sum_probs=72.6
Q ss_pred HHHHHHHHcCCCEEEec---------CcC-----ChhhHHHHHHHHhccCCCCceEEee--ecCHHHHhcHHHHHhc-CC
Q 008172 269 DDIEFGIAEGVDFIAMS---------FVC-----DADSVRHLKKYVSGKSSRSIKVLAK--IENLESLQKFEEIVEA-SD 331 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S---------fV~-----sa~dv~~ir~~l~~~~~~~i~IIaK--IEt~~av~nldeI~~~-sD 331 (575)
+..+..-+.|+|-|.+= |-. +.++++++++.+ .+.+++| |-. ++..+.+.+. +|
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v------~iPvl~k~~i~~---ide~qil~aaGAD 102 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI------SINVLAKVRIGH---FVEAQILEELKVD 102 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC------CSEEEEEEETTC---HHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc------CCCEEEeccCCc---HHHHHHHHHcCCC
Confidence 44566778999987655 322 777887777543 4778876 444 3334444444 89
Q ss_pred EEEEeCCCCCCCCCCCChHHHHHHHHHHHHH--cCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcC
Q 008172 332 GIMVARGDLGVDIPLEQIPTVQEIIIHVCRQ--LNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESA 409 (575)
Q Consensus 332 gImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~--~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa 409 (575)
+| |..-...+++ +++.+++ .|.++++.. .+..| .-.++..|+|.|-..++-.
T Consensus 103 ~I-----d~s~~~~~~~-------li~~i~~~~~g~~vvv~v-----------~~~~E---a~~a~~~Gad~I~v~g~~g 156 (297)
T 4adt_A 103 ML-----DESEVLTMAD-------EYNHINKHKFKTPFVCGC-----------TNLGE---ALRRISEGASMIRTKGEAG 156 (297)
T ss_dssp EE-----EEETTSCCSC-------SSCCCCGGGCSSCEEEEE-----------SSHHH---HHHHHHHTCSEEEECCCTT
T ss_pred EE-----EcCCCCCHHH-------HHHHHHhcCCCCeEEEEe-----------CCHHH---HHHHHhCCCCEEEECCCcC
Confidence 98 2211112222 2233344 578887632 33333 3456778999999987722
Q ss_pred CCCCHHHHHHHHHHHH
Q 008172 410 IGPFGQKAVSVLQMAS 425 (575)
Q Consensus 410 ~G~yPveaV~~m~~I~ 425 (575)
.| +-+++|+|++.+.
T Consensus 157 TG-~~~~~v~h~~~~~ 171 (297)
T 4adt_A 157 TG-NIIEAIKHIRTVN 171 (297)
T ss_dssp SC-CCHHHHHHHHHHH
T ss_pred CC-chHHHHHHHHHhh
Confidence 22 3489999998775
No 241
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=45.56 E-value=94 Score=30.90 Aligned_cols=90 Identities=18% Similarity=0.300 Sum_probs=51.0
Q ss_pred HHHHHHHHHcCCCE--EEecC---------cCChhh-----------HHHHHHHHhccCCCCceEEeee-cCH---HHHh
Q 008172 268 WDDIEFGIAEGVDF--IAMSF---------VCDADS-----------VRHLKKYVSGKSSRSIKVLAKI-ENL---ESLQ 321 (575)
Q Consensus 268 ~~di~~al~~gvd~--I~~Sf---------V~sa~d-----------v~~ir~~l~~~~~~~i~IIaKI-Et~---~av~ 321 (575)
.+.++...+.|+|+ +.+|| ++.+.. +-++.+-+++.+ .++.++.+. .|+ -|++
T Consensus 37 ~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~-~~~Pivlm~Y~n~v~~~g~~ 115 (271)
T 3nav_A 37 LAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARN-PETPIGLLMYANLVYARGID 115 (271)
T ss_dssp HHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC-TTSCEEEEECHHHHHHTCHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-CCCCEEEEecCcHHHHHhHH
Confidence 34455556789998 56777 443221 112222233332 345666652 232 3566
Q ss_pred cHHHH-Hhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEE
Q 008172 322 KFEEI-VEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVI 368 (575)
Q Consensus 322 nldeI-~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvi 368 (575)
++-+- .+. +||+++. || |+++ .....+.|+++|...+
T Consensus 116 ~f~~~~~~aGvdGvIip--Dl----p~ee----~~~~~~~~~~~gl~~I 154 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLIA--DV----PTNE----SQPFVAAAEKFGIQPI 154 (271)
T ss_dssp HHHHHHHHHTCCEEEET--TS----CGGG----CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHCCCCEEEEC--CC----CHHH----HHHHHHHHHHcCCeEE
Confidence 55433 333 8999993 55 5554 4678889999998655
No 242
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=45.48 E-value=67 Score=36.13 Aligned_cols=132 Identities=14% Similarity=0.133 Sum_probs=68.1
Q ss_pred CCCccCHHHH--------HHHHHcCCCEEEe-------------cCcCChhh------------HHHHHHHHhccCCCCc
Q 008172 262 TLSKKDWDDI--------EFGIAEGVDFIAM-------------SFVCDADS------------VRHLKKYVSGKSSRSI 308 (575)
Q Consensus 262 ~lsekD~~di--------~~al~~gvd~I~~-------------SfV~sa~d------------v~~ir~~l~~~~~~~i 308 (575)
.||+.|++.+ +.|.+.|+|+|=+ |..+...| +.++.+.+.+.-+++.
T Consensus 138 ~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~ 217 (729)
T 1o94_A 138 EMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDC 217 (729)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCc
Confidence 5676666555 4677899999877 33433332 3344333333212456
Q ss_pred eEEeeec------------CHHHHhcHHHHHhcCCEEEEeCCCC---CC-CCCCCChH-HHHHHHHHHHHH-cCCCEEEe
Q 008172 309 KVLAKIE------------NLESLQKFEEIVEASDGIMVARGDL---GV-DIPLEQIP-TVQEIIIHVCRQ-LNKPVIVA 370 (575)
Q Consensus 309 ~IIaKIE------------t~~av~nldeI~~~sDgImIaRGDL---g~-e~~~e~v~-~~Qk~Ii~~c~~-~gKPviva 370 (575)
.|..||- ..++++-...+-+.+|.+=+.-|.+ .- ..+....+ ..+...++..++ .+.|||..
T Consensus 218 pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~ 297 (729)
T 1o94_A 218 AIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGV 297 (729)
T ss_dssp EEEEEEEEECSSCTTSCCTTTHHHHHHHHHGGGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECC
T ss_pred eEEEEEccccCcCCCCCCchHHHHHHHHHHHhhcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEe
Confidence 7888882 1234432222222378887766642 11 11110001 112334443443 58899975
Q ss_pred hhhHHhhhcCCCCChhhHhhHHHHHHcc-cceEEec
Q 008172 371 SQLLESMVEYPTPTRAEVADVSEAVRQY-ADALMLS 405 (575)
Q Consensus 371 Tq~LeSM~~~p~PtrAEv~Dv~nav~~G-~D~vmLs 405 (575)
.. .-|.. +...++..| +|+||+.
T Consensus 298 G~---------i~~~~---~a~~~l~~g~aD~V~~g 321 (729)
T 1o94_A 298 GR---------YTDPE---KMIEIVTKGYADIIGCA 321 (729)
T ss_dssp SC---------CCCHH---HHHHHHHTTSCSBEEES
T ss_pred CC---------CCCHH---HHHHHHHCCCCCEEEeC
Confidence 32 22333 335567777 9999996
No 243
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=45.33 E-value=82 Score=32.37 Aligned_cols=96 Identities=13% Similarity=0.053 Sum_probs=59.4
Q ss_pred HHHHHHHHcCCCEEEe------cCcCChhhHHHHHHHHhccCCCCceEEeeec---CHHHHhcHHHHHhc-CCEEEEeCC
Q 008172 269 DDIEFGIAEGVDFIAM------SFVCDADSVRHLKKYVSGKSSRSIKVLAKIE---NLESLQKFEEIVEA-SDGIMVARG 338 (575)
Q Consensus 269 ~di~~al~~gvd~I~~------SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIE---t~~av~nldeI~~~-sDgImIaRG 338 (575)
+.++|.++.|+|+|++ ++.-|.++=.++-+. ... .++.||+-+= +.++++......+. +|++|+-+-
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~~~--grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 127 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-LVK--AGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPR 127 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-HHH--TTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-HhC--CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 4556788999999986 355566666666555 222 3578888884 46777766666665 899999755
Q ss_pred CCCCCCCCCChHHHHHHHHHHHH-HcCCCEEEe
Q 008172 339 DLGVDIPLEQIPTVQEIIIHVCR-QLNKPVIVA 370 (575)
Q Consensus 339 DLg~e~~~e~v~~~Qk~Ii~~c~-~~gKPviva 370 (575)
...-..+.+.+...-+.| +. +.+.|+++.
T Consensus 128 ~y~~~~s~~~l~~~f~~I---A~aa~~lPiilY 157 (344)
T 2hmc_A 128 VLSRGSVIAAQKAHFKAI---LSAAPEIPAVIY 157 (344)
T ss_dssp CSSSTTCHHHHHHHHHHH---HHHSTTSCEEEE
T ss_pred ccCCCCCHHHHHHHHHHH---HhhCCCCcEEEE
Confidence 432101122333333333 44 457899875
No 244
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=44.88 E-value=54 Score=33.96 Aligned_cols=137 Identities=15% Similarity=0.078 Sum_probs=72.7
Q ss_pred HcCCCEEEecCc-----------CChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHh------cCCEEEEe--
Q 008172 276 AEGVDFIAMSFV-----------CDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVE------ASDGIMVA-- 336 (575)
Q Consensus 276 ~~gvd~I~~SfV-----------~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~------~sDgImIa-- 336 (575)
+.|+|+|-+.+= ++++.+.++-+.+.+.- ++.|++||=----.+++.++++ -+|+|.+-
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~--~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT 230 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY--PHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINS 230 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHC--CSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCC
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhh--CCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecc
Confidence 357899876542 35666666666665542 4789999942212233444443 26777641
Q ss_pred --CC---CCC---------CCCC-C--CChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHc
Q 008172 337 --RG---DLG---------VDIP-L--EQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQ 397 (575)
Q Consensus 337 --RG---DLg---------~e~~-~--e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~ 397 (575)
+| |+- ...+ + +-+..+--++++..++. ..|+|...-+. ...|+..++..
T Consensus 231 ~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~------------s~~da~~~l~a 298 (354)
T 4ef8_A 231 IGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVY------------TGEDAFLHVLA 298 (354)
T ss_dssp EEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCC------------SHHHHHHHHHH
T ss_pred cCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEECCcC------------CHHHHHHHHHc
Confidence 11 100 0000 0 22222233444444443 47888755433 24577888899
Q ss_pred ccceEEeccCcCC-CCCHHHHHHHHHHHHHHHhhhh
Q 008172 398 YADALMLSGESAI-GPFGQKAVSVLQMASSRMELWS 432 (575)
Q Consensus 398 G~D~vmLs~ETa~-G~yPveaV~~m~~I~~~aE~~~ 432 (575)
|+|+||+..---. | | .++.+|.+.-+.|+
T Consensus 299 GAd~V~vgra~l~~G--P----~~~~~i~~~l~~~m 328 (354)
T 4ef8_A 299 GASMVQVGTALQEEG--P----SIFERLTSELLGVM 328 (354)
T ss_dssp TEEEEEECHHHHHHC--T----THHHHHHHHHHHHH
T ss_pred CCCEEEEhHHHHHhC--H----HHHHHHHHHHHHHH
Confidence 9999999632111 1 2 24455655555544
No 245
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=44.64 E-value=88 Score=31.30 Aligned_cols=97 Identities=13% Similarity=0.126 Sum_probs=59.3
Q ss_pred HHHHHHHHcCCCEEEec------CcCChhhHHHHHHH-HhccCCCCceEEeee---cCHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAMS------FVCDADSVRHLKKY-VSGKSSRSIKVLAKI---ENLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S------fV~sa~dv~~ir~~-l~~~~~~~i~IIaKI---Et~~av~nldeI~~~-sDgImIaR 337 (575)
+.+++.++.|+|+|++. +--|.++=.++-+. ++..+ .++.||+-+ -+.++++......+. +|++|+.+
T Consensus 29 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (300)
T 3eb2_A 29 RLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQ-RRVPVVAGVASTSVADAVAQAKLYEKLGADGILAIL 107 (300)
T ss_dssp HHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhC-CCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 45568889999998643 23344444444443 33333 467788776 467777777777666 99999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+. +..-+.+.+.+.|+++-
T Consensus 108 P~y~~-~~~~~l~---~~f~~va~a~~lPiilY 136 (300)
T 3eb2_A 108 EAYFP-LKDAQIE---SYFRAIADAVEIPVVIY 136 (300)
T ss_dssp CCSSC-CCHHHHH---HHHHHHHHHCSSCEEEE
T ss_pred CCCCC-CCHHHHH---HHHHHHHHHCCCCEEEE
Confidence 44321 1223333 34444455568999985
No 246
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=44.46 E-value=1e+02 Score=29.44 Aligned_cols=37 Identities=14% Similarity=0.162 Sum_probs=28.4
Q ss_pred HHHHHHHHHcCCCEEEecCc-------CChhhHHHHHHHHhccC
Q 008172 268 WDDIEFGIAEGVDFIAMSFV-------CDADSVRHLKKYVSGKS 304 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV-------~sa~dv~~ir~~l~~~~ 304 (575)
.+.++.+.+.|+|+|=+... .+.+++.++++.+.+.|
T Consensus 18 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~g 61 (286)
T 3dx5_A 18 TDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKT 61 (286)
T ss_dssp HHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGT
T ss_pred HHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcC
Confidence 35678889999999988432 23578889999998876
No 247
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=44.41 E-value=2.2e+02 Score=27.30 Aligned_cols=128 Identities=18% Similarity=0.214 Sum_probs=75.1
Q ss_pred HHHHHHHHcCCCEEEe-----cCcCC----hhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCC
Q 008172 269 DDIEFGIAEGVDFIAM-----SFVCD----ADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARG 338 (575)
Q Consensus 269 ~di~~al~~gvd~I~~-----SfV~s----a~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRG 338 (575)
+.++.+ +.|+||+=+ .||.+ +..++++|++. + ..+-+=.|+++++. -++...+. +|+|.+-
T Consensus 17 ~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~---~-~~~dvhLmv~dp~~--~i~~~~~aGAd~itvh-- 87 (231)
T 3ctl_A 17 EQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLA---T-KPLDCHLMVTRPQD--YIAQLARAGADFITLH-- 87 (231)
T ss_dssp HHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTC---C-SCEEEEEESSCGGG--THHHHHHHTCSEEEEC--
T ss_pred HHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhcc---C-CcEEEEEEecCHHH--HHHHHHHcCCCEEEEC--
Confidence 344566 889887422 34443 45566666542 1 34667788998864 36777777 8999884
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEe-ccCcCCC--CCHH
Q 008172 339 DLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALML-SGESAIG--PFGQ 415 (575)
Q Consensus 339 DLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmL-s~ETa~G--~yPv 415 (575)
.|.+ -+. -++.++.++++|+-++++. ||. |..| ....+++++|.|++ |-+...| +|.-
T Consensus 88 ---~Ea~---~~~-~~~~i~~i~~~G~k~gv~l--------np~-tp~~---~~~~~l~~~D~VlvmsV~pGfggQ~f~~ 148 (231)
T 3ctl_A 88 ---PETI---NGQ-AFRLIDEIRRHDMKVGLIL--------NPE-TPVE---AMKYYIHKADKITVMTVDPGFAGQPFIP 148 (231)
T ss_dssp ---GGGC---TTT-HHHHHHHHHHTTCEEEEEE--------CTT-CCGG---GGTTTGGGCSEEEEESSCTTCSSCCCCT
T ss_pred ---cccC---Ccc-HHHHHHHHHHcCCeEEEEE--------ECC-CcHH---HHHHHHhcCCEEEEeeeccCcCCccccH
Confidence 1220 112 3588999999999999974 332 2222 12344678998864 5555444 3444
Q ss_pred HHHHHHHHH
Q 008172 416 KAVSVLQMA 424 (575)
Q Consensus 416 eaV~~m~~I 424 (575)
++.+.++.+
T Consensus 149 ~~l~kI~~l 157 (231)
T 3ctl_A 149 EMLDKLAEL 157 (231)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444443333
No 248
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=44.32 E-value=81 Score=30.64 Aligned_cols=37 Identities=8% Similarity=0.082 Sum_probs=27.6
Q ss_pred HHHHHHHHHcCCCEEEecCcC------ChhhHHHHHHHHhccC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVC------DADSVRHLKKYVSGKS 304 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~------sa~dv~~ir~~l~~~~ 304 (575)
.+.++.+.+.|+|+|=+.+-. ...++.++++.+.+.|
T Consensus 39 ~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~g 81 (296)
T 2g0w_A 39 PKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHN 81 (296)
T ss_dssp HHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcC
Confidence 356788899999999887631 3456778888887765
No 249
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=44.12 E-value=27 Score=35.21 Aligned_cols=64 Identities=13% Similarity=0.159 Sum_probs=49.3
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHH--hcHHHHHhc-CCEEEEeC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESL--QKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av--~nldeI~~~-sDgImIaR 337 (575)
.+.++.+++.|+|+|.+-.. ++++++++.+.+...+ .++ +||---|+ +|+.++.+. +|+|-+|.
T Consensus 204 ~eea~eal~aGaD~I~LDn~-~~~~~~~~v~~l~~~~-~~v----~ieaSGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 204 LEQLDAVLPEKPELILLDNF-AVWQTQTAVQRRDSRA-PTV----MLESSGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHHHHHGGGCCSEEEEETC-CHHHHHHHHHHHHHHC-TTC----EEEEESSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccC-CCe----EEEEECCCCHHHHHHHHhcCCCEEEECH
Confidence 67778899999999999884 8899999988887643 344 34433343 688999998 99999976
No 250
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=43.85 E-value=26 Score=35.78 Aligned_cols=86 Identities=21% Similarity=0.376 Sum_probs=59.6
Q ss_pred CCceEEeeecCH--------HHHhcHHHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHh
Q 008172 306 RSIKVLAKIENL--------ESLQKFEEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLES 376 (575)
Q Consensus 306 ~~i~IIaKIEt~--------~av~nldeI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeS 376 (575)
+.++++++.|.. +-.+.++.++.. .-+|+++|||+- -+.+++.|++.|.|++. |
T Consensus 48 ~RVQi~Gn~E~~yL~~L~~e~~~~rler~l~~~~P~IIltrg~~~-----------peelie~A~~~~IPVL~-T----- 110 (314)
T 1ko7_A 48 DRIQLLGTTELSFYNLLPDEERKGRMRKLCRPETPAIIVTRDLEP-----------PEELIEAAKEHETPLIT-S----- 110 (314)
T ss_dssp TSEEEECHHHHHHHHHSCHHHHTTHHHHHCCTTCCCEEECTTCCC-----------CHHHHHHHHHTTCCEEE-C-----
T ss_pred ccEEEEechhHHHHHhcCHHHHHHHHHHHhcCCCCEEEEeCCCCC-----------CHHHHHHHHHCCCeEEE-E-----
Confidence 357777766652 222445555543 679999999982 23588999999999985 3
Q ss_pred hhcCCCCChhhHhhHHHHHHc---------------ccceEEeccCcCCCC
Q 008172 377 MVEYPTPTRAEVADVSEAVRQ---------------YADALMLSGESAIGP 412 (575)
Q Consensus 377 M~~~p~PtrAEv~Dv~nav~~---------------G~D~vmLs~ETa~G~ 412 (575)
+.+|-.=+..+.+++.. +--++++.|++..||
T Consensus 111 ----~~~ts~~~~~l~~~l~~~~~~~~~~H~~~v~~~g~~vl~~G~sG~GK 157 (314)
T 1ko7_A 111 ----KIATTQLMSRLTTFLEHELARTTSLHGVLVDVYGVGVLITGDSGIGK 157 (314)
T ss_dssp ----CSCHHHHHHHHHHHHHHHTCEEEEEESEEEEETTEEEEEEESTTSSH
T ss_pred ----CCchhHHHHHHHHHHHHhhccceeeeEEEEEECCEEEEEEeCCCCCH
Confidence 34555445666666665 125899999999998
No 251
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=43.55 E-value=88 Score=32.89 Aligned_cols=63 Identities=13% Similarity=0.342 Sum_probs=42.9
Q ss_pred CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHc-cc-ceEEeccC
Q 008172 330 SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQ-YA-DALMLSGE 407 (575)
Q Consensus 330 sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~-G~-D~vmLs~E 407 (575)
+|.+=||-+|+ .+.| +++++-+.|||||+.|-| -|-+|+...+..+.. |. +.++|-.
T Consensus 135 vd~~KIgS~~~------~N~p-----LL~~va~~gKPViLStGm---------aTl~Ei~~Ave~i~~~Gn~~iiLlhc- 193 (385)
T 1vli_A 135 PSAFKIASYEI------NHLP-----LLKYVARLNRPMIFSTAG---------AEISDVHEAWRTIRAEGNNQIAIMHC- 193 (385)
T ss_dssp CSCEEECGGGT------TCHH-----HHHHHHTTCSCEEEECTT---------CCHHHHHHHHHHHHTTTCCCEEEEEE-
T ss_pred CCEEEECcccc------cCHH-----HHHHHHhcCCeEEEECCC---------CCHHHHHHHHHHHHHCCCCcEEEEec-
Confidence 57777776666 3444 456677789999998865 377899888887764 66 5555532
Q ss_pred cCCCCCHH
Q 008172 408 SAIGPFGQ 415 (575)
Q Consensus 408 Ta~G~yPv 415 (575)
+-.||.
T Consensus 194 --~s~YPt 199 (385)
T 1vli_A 194 --VAKYPA 199 (385)
T ss_dssp --CSSSSC
T ss_pred --cCCCCC
Confidence 334763
No 252
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=42.87 E-value=94 Score=31.27 Aligned_cols=99 Identities=9% Similarity=0.159 Sum_probs=63.5
Q ss_pred hhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 291 DSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 291 ~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
+.++.++++..+.| +.+++-+-+++.++-+.+ .+|.+-||-+++ ...+ +++++.+.||||++.
T Consensus 76 ~gl~~l~~~~~~~G---lp~~te~~d~~~~~~l~~---~vd~~kIgA~~~------~n~~-----Ll~~~a~~~kPV~lk 138 (292)
T 1o60_A 76 EGLKIFQELKDTFG---VKIITDVHEIYQCQPVAD---VVDIIQLPAFLA------RQTD-----LVEAMAKTGAVINVK 138 (292)
T ss_dssp HHHHHHHHHHHHHC---CEEEEECCSGGGHHHHHT---TCSEEEECGGGT------TCHH-----HHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcC---CcEEEecCCHHHHHHHHh---cCCEEEECcccc------cCHH-----HHHHHHcCCCcEEEe
Confidence 34566677776665 788888888777766654 589999986655 3333 556666889999997
Q ss_pred hhhHHhhhcCCCCChhhHhhHHHHHH-cccceEEeccCcCCCCCH
Q 008172 371 SQLLESMVEYPTPTRAEVADVSEAVR-QYADALMLSGESAIGPFG 414 (575)
Q Consensus 371 Tq~LeSM~~~p~PtrAEv~Dv~nav~-~G~D~vmLs~ETa~G~yP 414 (575)
|.|- -|-.|+.+.+..+. .|.+-++|---+..-.|+
T Consensus 139 ~G~~--------~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~~y~ 175 (292)
T 1o60_A 139 KPQF--------LSPSQMGNIVEKIEECGNDKIILCDRGTNFGYD 175 (292)
T ss_dssp CCTT--------SCGGGHHHHHHHHHHTTCCCEEEEECCEECSTT
T ss_pred CCCC--------CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCC
Confidence 7553 24557766666554 576444443222222564
No 253
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=42.71 E-value=19 Score=39.68 Aligned_cols=50 Identities=24% Similarity=0.326 Sum_probs=41.5
Q ss_pred ceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHH
Q 008172 91 TKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQL 140 (575)
Q Consensus 91 tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~ 140 (575)
-.+=|.+|-.-.+.|-.+.|+++|+|++=++-+||..+...++++.||+.
T Consensus 270 L~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~ 319 (556)
T 4af0_A 270 LYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQT 319 (556)
T ss_dssp BCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred eeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhh
Confidence 34556677655678899999999999999999999999888888888753
No 254
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=42.66 E-value=68 Score=32.91 Aligned_cols=148 Identities=15% Similarity=0.158 Sum_probs=87.4
Q ss_pred ccCHHHHHHHHHcCCCE--EEecCcCChhhHHHHHHHHhccCCCCceEEee-ecCHHHHhcHHHHHhcC----CEEEEeC
Q 008172 265 KKDWDDIEFGIAEGVDF--IAMSFVCDADSVRHLKKYVSGKSSRSIKVLAK-IENLESLQKFEEIVEAS----DGIMVAR 337 (575)
Q Consensus 265 ekD~~di~~al~~gvd~--I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaK-IEt~~av~nldeI~~~s----DgImIaR 337 (575)
..|.+-++.|++.|++. ++-|. +- +...++-..+.+.+ ..++++ ..+.+-++.+-+.+... +-|++.+
T Consensus 141 T~~~eV~eaAleagag~~~lINsv-~~-~~~~~m~~laa~~g---~~vVlmh~~d~~~~~~l~~~a~~~GI~~e~IIlDP 215 (323)
T 4djd_D 141 EKDHEVLEAVAEAAAGENLLLGNA-EQ-ENYKSLTAACMVHK---HNIIARSPLDINICKQLNILINEMNLPLDHIVIDP 215 (323)
T ss_dssp HHHHHHHHHHHHHTTTSCCEEEEE-BT-TBCHHHHHHHHHHT---CEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEEC
T ss_pred CCCHHHHHHHHHhcCCCCCeEEEC-Cc-ccHHHHHHHHHHhC---CeEEEEccchHHHHHHHHHHHHHcCCCHHHEEEeC
Confidence 56788999999998762 33332 21 22234444444444 344444 33444444555454543 5699999
Q ss_pred CCCCCCCCCCChHHHHHHHHHHH----HHcCCCEEEehhhHHhhhcC-------------CCCChh---hHhhHHHHHHc
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVC----RQLNKPVIVASQLLESMVEY-------------PTPTRA---EVADVSEAVRQ 397 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c----~~~gKPvivaTq~LeSM~~~-------------p~PtrA---Ev~Dv~nav~~ 397 (575)
|=.....+.+.-....+++-+.+ +..|-|+++.+- -+||+.+ +...|+ |+.--...+.-
T Consensus 216 g~g~fgk~~e~~l~~l~~ir~~al~~~~~lg~PvL~GvS-rksf~~ke~~~~~~~~~~~g~~~~~~~~~E~~~a~~~~~~ 294 (323)
T 4djd_D 216 SIGGLGYGIEYSFSIMERIRLGALQGDKMLSMPVICTVG-YEAWRAKEASAPVSEYPGWGKETERGILWEAVTATALLQA 294 (323)
T ss_dssp CCCCTTTTHHHHHHHHHHHHHHHHHTCGGGCSCBEEEHH-HHHHTSHHHHCCTTTCGGGCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCccccCCHHHHHHHHHHHHHHhhcccccCCCCEEEecc-hhhhhhccccccccccccccccchhhHHHHHHHHHHHHHh
Confidence 87655556666666666665432 368999998531 2344443 122243 33444557789
Q ss_pred ccceEEeccCcCCCCCHHHHHHHHHHHHH
Q 008172 398 YADALMLSGESAIGPFGQKAVSVLQMASS 426 (575)
Q Consensus 398 G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 426 (575)
|+|.++|. +| ++|+++++.+.
T Consensus 295 ~~~i~v~~-------~p-~~~~~~~~~~~ 315 (323)
T 4djd_D 295 GAHILLMR-------HP-EAVARVKENID 315 (323)
T ss_dssp TCSEEEEC-------CH-HHHHHHHHHHH
T ss_pred cCCEEEEc-------CH-HHHHHHHHHHH
Confidence 99999996 56 68888887753
No 255
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=42.65 E-value=54 Score=30.76 Aligned_cols=84 Identities=15% Similarity=0.088 Sum_probs=48.5
Q ss_pred HHHHHHHHHcCCCEEEecCcC--------ChhhHHHHHHHHhccCCCCceEE--eeecCHHHHhcHHHHHhc-CCEEEEe
Q 008172 268 WDDIEFGIAEGVDFIAMSFVC--------DADSVRHLKKYVSGKSSRSIKVL--AKIENLESLQKFEEIVEA-SDGIMVA 336 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~--------sa~dv~~ir~~l~~~~~~~i~II--aKIEt~~av~nldeI~~~-sDgImIa 336 (575)
.+.++.+.+.|+|+|.+..+. ..+.++++++.. ++.++ .=|.+. +|+.+.++. +||+++|
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~------~~pvia~GGi~~~---~~~~~~~~~Ga~~v~vg 227 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSV------RIPVIASGGAGRV---EHFYEAAAAGADAVLAA 227 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHC------SSCEEEESCCCSH---HHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhc------CCCEEEeCCCCCH---HHHHHHHHcCCcHHHHH
Confidence 355677889999999875443 223444444432 23344 344443 566666666 9999999
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHcCCCE
Q 008172 337 RGDLGVDIPLEQIPTVQEIIIHVCRQLNKPV 367 (575)
Q Consensus 337 RGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPv 367 (575)
++=+....+ -+++.+..+++|-|+
T Consensus 228 sal~~~~~~-------~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 228 SLFHFRVLS-------IAQVKRYLKERGVEV 251 (253)
T ss_dssp HHHHTTSSC-------HHHHHHHHHHTTCBC
T ss_pred HHHHcCCCC-------HHHHHHHHHHcCCCC
Confidence 864433322 234445556666553
No 256
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=42.38 E-value=39 Score=33.03 Aligned_cols=57 Identities=16% Similarity=0.035 Sum_probs=38.0
Q ss_pred ceEEEecC-CCC-CCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEE
Q 008172 91 TKMVCTIG-PAC-CSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISV 150 (575)
Q Consensus 91 tkIi~TiG-Pas-~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~I 150 (575)
++...|.| |.- .+.+.++.|.++|+|++=+-+|+|... .++++.++++++ .+.|+.+
T Consensus 8 ~~~~it~gDP~~~~t~~~~~~l~~~GaD~IelG~S~g~t~--~~~~~~v~~ir~-~~~Pivl 66 (234)
T 2f6u_A 8 KWRHITKLDPDRTNTDEIIKAVADSGTDAVMISGTQNVTY--EKARTLIEKVSQ-YGLPIVV 66 (234)
T ss_dssp GCCEEEEECTTSCCCHHHHHHHHTTTCSEEEECCCTTCCH--HHHHHHHHHHTT-SCCCEEE
T ss_pred cceEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCH--HHHHHHHHHhcC-CCCCEEE
Confidence 34445666 544 578999999999999999999998653 234444554443 3444433
No 257
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=42.02 E-value=27 Score=33.19 Aligned_cols=59 Identities=12% Similarity=0.124 Sum_probs=40.9
Q ss_pred EecCCEEEEEeecc--CC--CCCcEEEeccccccc--ccCCCCEEEEe--CCeeEEEEEEEECCeEE
Q 008172 172 VEEDSIWLFTAIKF--EG--SRPFTVKANYAGFSE--GIEVGDELVID--GGMASFEVIEKVGNDLR 230 (575)
Q Consensus 172 l~~G~~v~lt~~~~--~~--~~~~~i~v~~~~l~~--~v~~Gd~IliD--DG~i~l~V~~~~~~~i~ 230 (575)
.+.|++++|+.... ++ .......++.+.|.. .+++|+.+.+. +|.+..+|+++.++.++
T Consensus 52 m~vGe~~~v~Ippe~aYGe~~~~lV~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~ 118 (196)
T 2kfw_A 52 HEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVV 118 (196)
T ss_dssp SCTTCEEEEECSTTTTSSCCCTTTCEEECGGGCCCSSCCCTTCEEEEEETTEEEEEEBCCCCSSSEE
T ss_pred CCCCCEEEEEeCcHHhcCCCChhhEEEEEHHHCCCccCcccCCEEEEECCCCcEEEEEEEEcCCEEE
Confidence 46899998886542 22 122456677777764 58999999997 56667778888777655
No 258
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=41.91 E-value=23 Score=35.78 Aligned_cols=65 Identities=14% Similarity=0.204 Sum_probs=48.5
Q ss_pred CHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHH--HhcHHHHHhc-CCEEEEeC
Q 008172 267 DWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLES--LQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~a--v~nldeI~~~-sDgImIaR 337 (575)
+.+.++.|++.|+|+|.+... ++++++++.+.+...+ .++.+ |---| .+|+.++++. +|+|-++.
T Consensus 202 tleea~eA~~aGaD~I~LDn~-~~e~l~~av~~l~~~~-~~v~i----eASGGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 202 NLEDALRAVEAGADIVMLDNL-SPEEVKDISRRIKDIN-PNVIV----EVSGGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp SHHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHC-TTSEE----EEEECCCTTTGGGGCCTTCCEEEEGG
T ss_pred CHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccC-CCceE----EEECCCCHHHHHHHHHcCCCEEEEeH
Confidence 578888899999999999984 8899999998886533 23433 22222 3577777777 89999986
No 259
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=41.77 E-value=22 Score=34.42 Aligned_cols=85 Identities=14% Similarity=0.082 Sum_probs=55.4
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVDIPL 346 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e~~~ 346 (575)
.+..+.+.+.|+|++.+|= ..++++..+|+.+. +-+.+..=|=-+ | .+..+.++. +|.++|||+=...+=|.
T Consensus 125 ~~~a~~a~~~g~~GvV~sa-t~p~e~~~ir~~~~----~~~~vtPGI~~~-g-~tp~~a~~~Gad~iVVGR~I~~A~dP~ 197 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGG-TKLDHITQYRRDFE----KMTIVSPGMGSQ-G-GSYGDAVCAGADYEIIGRSIYNAGNPL 197 (222)
T ss_dssp HHHHHHHHHHCCSEEEECT-TCHHHHHHHHHHCT----TCEEEECCBSTT-S-BCTTHHHHHTCSEEEECHHHHTSSSHH
T ss_pred HHHHHHHHHhCCCEEEECC-CCHHHHHHHHHhCC----CCEEEcCCcccC-c-cCHHHHHHcCCCEEEECHHhcCCCCHH
Confidence 5566778899999998774 34688999888763 223344445222 1 145454454 99999999988877666
Q ss_pred CChHHHHHHHHHH
Q 008172 347 EQIPTVQEIIIHV 359 (575)
Q Consensus 347 e~v~~~Qk~Ii~~ 359 (575)
+..-.+++.|-+.
T Consensus 198 ~aa~~i~~~i~~~ 210 (222)
T 4dbe_A 198 TALRTINKIIEDK 210 (222)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5555555555443
No 260
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=41.48 E-value=28 Score=34.23 Aligned_cols=145 Identities=13% Similarity=0.100 Sum_probs=80.8
Q ss_pred CCCCCccCHHH-HHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHH-------Hhc-C
Q 008172 260 LPTLSKKDWDD-IEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEI-------VEA-S 330 (575)
Q Consensus 260 lp~lsekD~~d-i~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI-------~~~-s 330 (575)
-|..|+.|++. +..|.++|++.|+++ +..+..+++.+.. ..++|.+=|=-|.|-...+.- ++. +
T Consensus 37 ~p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~~~L~~---s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GA 109 (239)
T 3ngj_A 37 KADATEEQIRKLCSEAAEYKFASVCVN----PTWVPLCAELLKG---TGVKVCTVIGFPLGATPSEVKAYETKVAVEQGA 109 (239)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHHTT---SSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhCC---CCCeEEEEeccCCCCCchHHHHHHHHHHHHcCC
Confidence 35667777644 467889999999884 6678888888842 346666656444333222211 111 5
Q ss_pred CEEEEeCCCCCCCCCC---CChHHHHH---HHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEE
Q 008172 331 DGIMVARGDLGVDIPL---EQIPTVQE---IIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALM 403 (575)
Q Consensus 331 DgImIaRGDLg~e~~~---e~v~~~Qk---~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vm 403 (575)
|.|=+ -+.++. .+-..+.+ .+.++|...-.+||+-|-. -|..|+..... +...|+|.|=
T Consensus 110 dEIDm-----ViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~---------Lt~eei~~a~~ia~~aGADfVK 175 (239)
T 3ngj_A 110 EEVDM-----VINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCY---------LTNEEKVEVCKRCVAAGAEYVK 175 (239)
T ss_dssp SEEEE-----ECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGG---------SCHHHHHHHHHHHHHHTCSEEE
T ss_pred CEEEE-----EeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCC---------CCHHHHHHHHHHHHHHCcCEEE
Confidence 55422 122221 22333333 4445554222345554433 36677666655 5678999998
Q ss_pred eccCcCCCCCHHHHHHHHHHHH
Q 008172 404 LSGESAIGPFGQKAVSVLQMAS 425 (575)
Q Consensus 404 Ls~ETa~G~yPveaV~~m~~I~ 425 (575)
-|.=-..|---++.|+.|++.+
T Consensus 176 TSTGf~~ggAt~~dv~lmr~~v 197 (239)
T 3ngj_A 176 TSTGFGTHGATPEDVKLMKDTV 197 (239)
T ss_dssp CCCSSSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHhh
Confidence 7722112223458899888764
No 261
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=41.47 E-value=76 Score=32.66 Aligned_cols=138 Identities=9% Similarity=0.066 Sum_probs=71.6
Q ss_pred HcCCC-EEEecCc-----------CChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc--CCEE--------
Q 008172 276 AEGVD-FIAMSFV-----------CDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA--SDGI-------- 333 (575)
Q Consensus 276 ~~gvd-~I~~SfV-----------~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~--sDgI-------- 333 (575)
+.|+| +|-+.+= ++++.+.++-+.+.+. -++.|++||=--.....+.++++. +|+|
T Consensus 152 ~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~--~~~PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt 229 (345)
T 3oix_A 152 ASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTY--FTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINS 229 (345)
T ss_dssp HSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTT--CCSCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCC
T ss_pred ccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHH--hCCCeEEEECCCCCHHHHHHHHHHhCCCceEEEEeecc
Confidence 35776 8766543 4556666666666543 247899999532223344444443 4443
Q ss_pred -----EEeCCCCCC----CC----CCCChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcc
Q 008172 334 -----MVARGDLGV----DI----PLEQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQY 398 (575)
Q Consensus 334 -----mIaRGDLg~----e~----~~e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G 398 (575)
.|.+.-... +. |.+.-|...+.+-+..++. ..|+|...-+- ...|+..++..|
T Consensus 230 ~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~------------s~~da~~~l~aG 297 (345)
T 3oix_A 230 IGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVX------------TGRDAFEHILCG 297 (345)
T ss_dssp EEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCC------------SHHHHHHHHHHT
T ss_pred cccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCC------------ChHHHHHHHHhC
Confidence 122211110 11 1122233334443333344 48988765433 345778888899
Q ss_pred cceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhh
Q 008172 399 ADALMLSGESAIGPFGQKAVSVLQMASSRMELWS 432 (575)
Q Consensus 399 ~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~ 432 (575)
+|+||+..--..+. | .++.+|.+.-+.|+
T Consensus 298 Ad~V~igra~~~~g-P----~~~~~i~~~L~~~l 326 (345)
T 3oix_A 298 ASMVQIGTALHQEG-P----QIFKRITKELXAIM 326 (345)
T ss_dssp CSEEEESHHHHHHC-T----HHHHHHHHHHHHHH
T ss_pred CCEEEEChHHHhcC-h----HHHHHHHHHHHHHH
Confidence 99999974312221 3 34555655555543
No 262
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=41.23 E-value=1.5e+02 Score=24.37 Aligned_cols=75 Identities=13% Similarity=0.046 Sum_probs=46.6
Q ss_pred HHHHHHhcCCcEEEEEcC----Chh-HHHHHhc--cCCCCcEEEEcCcHHHHHH--hcccCCcEEEEecCCCCHHHHHHH
Q 008172 463 AVDMANNLGVDAIFVYTK----HGH-MASLLSR--NRPNPPIFAFTNDDSTRMA--LNLQWGVIPVLVNLSDDMETNIAK 533 (575)
Q Consensus 463 av~~a~~~~AkaIVVfT~----SG~-TAr~VSr--~RP~~PIiAvT~~~~~aR~--L~L~~GV~Pvl~~~~~d~d~~i~~ 533 (575)
|.+...+...++|++-.. +|. ..+.+.+ ..|.+|||.+|........ ..+..|+.-++.++. +.++. ..
T Consensus 42 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~-~~~~l-~~ 119 (140)
T 3grc_A 42 ALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWLEKPI-DENLL-IL 119 (140)
T ss_dssp HHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEECSSC-CHHHH-HH
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEEeCCC-CHHHH-HH
Confidence 444555667787666432 343 4455555 5689999999988765432 467789998888765 34443 33
Q ss_pred HHHHHH
Q 008172 534 TIDLIK 539 (575)
Q Consensus 534 al~~~~ 539 (575)
++..+.
T Consensus 120 ~i~~~l 125 (140)
T 3grc_A 120 SLHRAI 125 (140)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 443333
No 263
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=41.17 E-value=1.6e+02 Score=27.92 Aligned_cols=113 Identities=16% Similarity=0.283 Sum_probs=63.3
Q ss_pred cCHHHHHHHHHcCCCEEEecCc-CChhhH--HHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc--CCEEEEeCCCC
Q 008172 266 KDWDDIEFGIAEGVDFIAMSFV-CDADSV--RHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA--SDGIMVARGDL 340 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~SfV-~sa~dv--~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~--sDgImIaRGDL 340 (575)
++.+|+..+.++|+|++.+-|. .|+..| .+++++..... ..+..+.=.-+. ..+.+.+|++. .|.+=+- ||
T Consensus 10 t~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~-~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLH-G~- 85 (205)
T 1nsj_A 10 TNLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELP-PFVFRVGVFVNE-EPEKILDVASYVQLNAVQLH-GE- 85 (205)
T ss_dssp CSHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSC-SSSEEEEEESSC-CHHHHHHHHHHHTCSEEEEC-SC-
T ss_pred CcHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCC-CCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEEC-CC-
Confidence 4688999999999999999975 444433 34444433322 233333333332 34566677665 6888885 43
Q ss_pred CCCCCCCChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCc
Q 008172 341 GVDIPLEQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGES 408 (575)
Q Consensus 341 g~e~~~e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ET 408 (575)
|.. . .|++. +.|++-|-.+ .+. .|+..+....+|.++|.+.+
T Consensus 86 ------e~~-~-------~~~~l~~~~~vika~~v---------~~~---~~l~~~~~~~~d~~LlD~~~ 129 (205)
T 1nsj_A 86 ------EPI-E-------LCRKIAERILVIKAVGV---------SNE---RDMERALNYREFPILLDTKT 129 (205)
T ss_dssp ------CCH-H-------HHHHHHTTSEEEEEEEE---------SSH---HHHHHHGGGTTSCEEEEESC
T ss_pred ------CCH-H-------HHHHHhcCCCEEEEEEc---------CCH---HHHHHHHHcCCCEEEECCCC
Confidence 221 1 12222 6788865322 122 23333333348999997543
No 264
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=41.12 E-value=1.5e+02 Score=28.19 Aligned_cols=131 Identities=18% Similarity=0.201 Sum_probs=71.0
Q ss_pred HHHHHHHHcCCCEEEe-----cCcCCh----hhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCC
Q 008172 269 DDIEFGIAEGVDFIAM-----SFVCDA----DSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARG 338 (575)
Q Consensus 269 ~di~~al~~gvd~I~~-----SfV~sa----~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRG 338 (575)
+.++.+.+.|+|++=+ +||.+. +.++++|+.. . ....+=-++++++- -++..++. +||+.+.-.
T Consensus 21 ~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~---~-~~~~vhlmv~dp~~--~i~~~~~aGadgv~vh~e 94 (230)
T 1tqj_A 21 EEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLT---K-KTLDVHLMIVEPEK--YVEDFAKAGADIISVHVE 94 (230)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGC---C-SEEEEEEESSSGGG--THHHHHHHTCSEEEEECS
T ss_pred HHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhc---C-CcEEEEEEccCHHH--HHHHHHHcCCCEEEECcc
Confidence 4456777889998622 344333 3444444322 1 12334478888743 45666666 899999611
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec-cCcCC--CCCHH
Q 008172 339 DLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS-GESAI--GPFGQ 415 (575)
Q Consensus 339 DLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs-~ETa~--G~yPv 415 (575)
-. + .+. -.+.++.++++|+-+++++ +|. |..|. ..++.+++|.+.+. -+... -+|+.
T Consensus 95 ~~----~-~~~---~~~~~~~i~~~g~~~gv~~--------~p~-t~~e~---~~~~~~~~D~v~~msv~pg~ggq~~~~ 154 (230)
T 1tqj_A 95 HN----A-SPH---LHRTLCQIRELGKKAGAVL--------NPS-TPLDF---LEYVLPVCDLILIMSVNPGFGGQSFIP 154 (230)
T ss_dssp TT----T-CTT---HHHHHHHHHHTTCEEEEEE--------CTT-CCGGG---GTTTGGGCSEEEEESSCC----CCCCG
T ss_pred cc----c-chh---HHHHHHHHHHcCCcEEEEE--------eCC-CcHHH---HHHHHhcCCEEEEEEeccccCCccCcH
Confidence 00 1 121 3477888899999999875 221 22221 34556789977542 22222 24554
Q ss_pred HHHHHHHHHH
Q 008172 416 KAVSVLQMAS 425 (575)
Q Consensus 416 eaV~~m~~I~ 425 (575)
...+.++++.
T Consensus 155 ~~~~~i~~lr 164 (230)
T 1tqj_A 155 EVLPKIRALR 164 (230)
T ss_dssp GGHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555543
No 265
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=41.03 E-value=2.9e+02 Score=27.61 Aligned_cols=94 Identities=12% Similarity=0.077 Sum_probs=64.5
Q ss_pred CCCccCHHHHHHHHHcCCCEEEecCc-------------CChhhHH-HHHHHHhccCCCCceEEeeecC------HHHHh
Q 008172 262 TLSKKDWDDIEFGIAEGVDFIAMSFV-------------CDADSVR-HLKKYVSGKSSRSIKVLAKIEN------LESLQ 321 (575)
Q Consensus 262 ~lsekD~~di~~al~~gvd~I~~SfV-------------~sa~dv~-~ir~~l~~~~~~~i~IIaKIEt------~~av~ 321 (575)
-+|--|.---+.+-+.|+|.|.+..- =+.+|+. ..+...+ +.+++.|++=+|+ .++++
T Consensus 33 m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r--~~~~~~vvaD~pfgsY~s~~~a~~ 110 (275)
T 3vav_A 33 MLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVAR--AQPRALIVADLPFGTYGTPADAFA 110 (275)
T ss_dssp EEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHH--TCCSSEEEEECCTTSCSSHHHHHH
T ss_pred EEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHh--cCCCCCEEEecCCCCCCCHHHHHH
Confidence 44667877777788899999987621 1223333 3344333 2356889999998 47788
Q ss_pred cHHHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEE
Q 008172 322 KFEEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIV 369 (575)
Q Consensus 322 nldeI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviv 369 (575)
|.-++++. ++||-+-=|. .+...|++..++|.||+-
T Consensus 111 ~a~rl~kaGa~aVklEdg~------------~~~~~i~~l~~~GIpv~g 147 (275)
T 3vav_A 111 SAVKLMRAGAQMVKFEGGE------------WLAETVRFLVERAVPVCA 147 (275)
T ss_dssp HHHHHHHTTCSEEEEECCG------------GGHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHcCCCEEEECCch------------hHHHHHHHHHHCCCCEEE
Confidence 88888887 8999886441 234566777889999983
No 266
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=40.92 E-value=1.2e+02 Score=30.35 Aligned_cols=125 Identities=14% Similarity=0.084 Sum_probs=71.6
Q ss_pred HHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhh
Q 008172 353 QEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWS 432 (575)
Q Consensus 353 Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~ 432 (575)
=.-+...|+..|.|+.+.. |..+....+...-..|++.+...++ +.| -++++...++.++-..++
T Consensus 85 g~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~---~~~-~~~~~~a~~l~~~~~~~~ 149 (325)
T 3dwg_A 85 GISLAMAARLKGYRLICVM-----------PENTSVERRQLLELYGAQIIFSAAE---GGS-NTAVATAKELAATNPSWV 149 (325)
T ss_dssp HHHHHHHHHHHTCEEEEEE-----------ESSSCHHHHHHHHHHTCEEEEECST---TTH-HHHHHHHHHHHHHCTTSB
T ss_pred HHHHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCC---CCH-HHHHHHHHHHHHhCCCeE
Confidence 3456778899999998742 3322233445556789998777543 122 455554444332211111
Q ss_pred hhhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcC-CcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCcH
Q 008172 433 REENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLG-VDAIFVYTKHGHMASLLSR----NRPNPPIFAFTNDD 504 (575)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~-AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~~ 504 (575)
...+.. .+..+..-....+.++..+++ .+.||+.+-+|.|+--+++ ..|...|+++.+..
T Consensus 150 ----------~~~~~~--np~~~~~g~~t~~~Ei~~q~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 214 (325)
T 3dwg_A 150 ----------MLYQYG--NPANTDSHYCGTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRY 214 (325)
T ss_dssp ----------CCCTTT--CHHHHHHHHHTHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEEEC
T ss_pred ----------eCCCCC--CHHHHHHHHHHHHHHHHHhcCCCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEeeCC
Confidence 111110 111111122344556766664 7999999999998766555 48999999997644
No 267
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=40.89 E-value=2.2e+02 Score=26.64 Aligned_cols=37 Identities=3% Similarity=-0.111 Sum_probs=28.6
Q ss_pred HHHHHHHHHcCCCEEEecCc------CChhhHHHHHHHHhccC
Q 008172 268 WDDIEFGIAEGVDFIAMSFV------CDADSVRHLKKYVSGKS 304 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV------~sa~dv~~ir~~l~~~~ 304 (575)
.+.++.+.+.|+|+|=+..- .+.+++.++++.+.+.|
T Consensus 22 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~g 64 (272)
T 2q02_A 22 EAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYG 64 (272)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcC
Confidence 45678889999999988642 14578899999998776
No 268
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=40.72 E-value=40 Score=33.06 Aligned_cols=58 Identities=17% Similarity=0.108 Sum_probs=36.1
Q ss_pred CceEEEecC-CCC-CCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEE
Q 008172 90 KTKMVCTIG-PAC-CSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISV 150 (575)
Q Consensus 90 ~tkIi~TiG-Pas-~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~I 150 (575)
+++...|.| |.- .+.+.++.|.++|+|++=+-.|.|...+ .+++.++++.+ ...|+-+
T Consensus 7 ~~~~~i~~gDP~~~~t~~~~~~l~~~GaD~ielG~S~Gvt~~--~~~~~v~~ir~-~~~Pivl 66 (240)
T 1viz_A 7 TEWKHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTED--NVLRMMSKVRR-FLVPCVL 66 (240)
T ss_dssp GGCCEEEEECTTSCCCHHHHHHHHTSCCSEEEECC----CHH--HHHHHHHHHTT-SSSCEEE
T ss_pred CcceEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHH--HHHHHHHHhhC-cCCCEEE
Confidence 344556666 544 5789999999999999999999987643 34555555544 4444433
No 269
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=40.54 E-value=34 Score=35.44 Aligned_cols=65 Identities=15% Similarity=0.246 Sum_probs=37.6
Q ss_pred CHHHHHHHHHcCCCEEEecCcC---------ChhhHHHHHHHHhccCCCCceEEe--eecCHHHHhcHHHHHhcCCEEEE
Q 008172 267 DWDDIEFGIAEGVDFIAMSFVC---------DADSVRHLKKYVSGKSSRSIKVLA--KIENLESLQKFEEIVEASDGIMV 335 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~SfV~---------sa~dv~~ir~~l~~~~~~~i~IIa--KIEt~~av~nldeI~~~sDgImI 335 (575)
..++++.+.+.|+|+|.+|.-- +.+-+.++++.+. +++.||+ -|-+.+-+ .+.+..=+|++||
T Consensus 235 ~~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~----~~ipvia~GGI~~~~D~--~k~l~~GAdaV~i 308 (370)
T 1gox_A 235 TAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQ----GRIPVFLDGGVRRGTDV--FKALALGAAGVFI 308 (370)
T ss_dssp SHHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTT----TSSCEEEESSCCSHHHH--HHHHHHTCSEEEE
T ss_pred CHHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhC----CCCEEEEECCCCCHHHH--HHHHHcCCCEEee
Confidence 4678899999999999997521 1223444444431 2455665 44443211 1122222899999
Q ss_pred eC
Q 008172 336 AR 337 (575)
Q Consensus 336 aR 337 (575)
||
T Consensus 309 Gr 310 (370)
T 1gox_A 309 GR 310 (370)
T ss_dssp CH
T ss_pred cH
Confidence 87
No 270
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=40.38 E-value=32 Score=29.17 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------hhHHHHHhccCCCCcEEEE
Q 008172 459 ICNCAVDMANNLGVDAIFVYTKH---------GHMASLLSRNRPNPPIFAF 500 (575)
Q Consensus 459 ia~~av~~a~~~~AkaIVVfT~S---------G~TAr~VSr~RP~~PIiAv 500 (575)
.+...++.|.+.+++.||+-++. |+++..+.+.-| ||++.|
T Consensus 98 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 147 (147)
T 3hgm_A 98 PSRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAH-CPVLVV 147 (147)
T ss_dssp HHHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCS-SCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCC-CCEEEC
Confidence 44556678889999988887653 678899988877 999864
No 271
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=40.10 E-value=1.1e+02 Score=27.80 Aligned_cols=59 Identities=15% Similarity=0.187 Sum_probs=40.4
Q ss_pred EecCCEEEEEeec--cCCC--CCcEEEeccccccc--ccCCCCEEEEe--CCe-eEEEEEEEECCeEE
Q 008172 172 VEEDSIWLFTAIK--FEGS--RPFTVKANYAGFSE--GIEVGDELVID--GGM-ASFEVIEKVGNDLR 230 (575)
Q Consensus 172 l~~G~~v~lt~~~--~~~~--~~~~i~v~~~~l~~--~v~~Gd~IliD--DG~-i~l~V~~~~~~~i~ 230 (575)
.+.|++.+++... ..+. ......++.+.|.. .+++|+.+.++ +|. +..+|.++.++.+.
T Consensus 47 m~~Ge~~~v~ipp~~aYG~~~~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~ 114 (158)
T 3cgm_A 47 REEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVT 114 (158)
T ss_dssp CBTTCEEEEEECGGGTTCCCCGGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEEETTEEE
T ss_pred CCCCCEEEEEECcHHHcCCCCcceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEE
Confidence 4688888887653 2232 12445566666654 68999999997 464 46778898888765
No 272
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=40.03 E-value=59 Score=33.07 Aligned_cols=60 Identities=15% Similarity=0.088 Sum_probs=40.7
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeC
Q 008172 90 KTKMVCTIGPACCSME----DLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDT 154 (575)
Q Consensus 90 ~tkIi~TiGPas~~~e----~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl 154 (575)
+....+++|- .+++ ..+++.++|.+.+.+++.|++.+.-.++++.+|++ .|..+.|++|.
T Consensus 133 ~vp~~~~~g~--~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g~~~~l~vDa 196 (359)
T 1mdl_A 133 PVQAYDSHSL--DGVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQA---VGDDFGIMVDY 196 (359)
T ss_dssp CEEEEEECCS--CHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHH---HCSSSEEEEEC
T ss_pred CeeeeeecCC--CCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHH---hCCCCEEEEEC
Confidence 4555566552 3443 44677889999999999998877767777777764 34345566665
No 273
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=40.01 E-value=81 Score=31.39 Aligned_cols=138 Identities=17% Similarity=0.217 Sum_probs=82.5
Q ss_pred HHHHHHHHHcC-CCEEEecCcCChhhHHHHHHHHhccCCCCceEEeee----cCHHHHhcHHHHH----hc-CCEEEEeC
Q 008172 268 WDDIEFGIAEG-VDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKI----ENLESLQKFEEIV----EA-SDGIMVAR 337 (575)
Q Consensus 268 ~~di~~al~~g-vd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKI----Et~~av~nldeI~----~~-sDgImIaR 337 (575)
.+.++.+++.| +|+|=+-+-...+.+.++.+...+. .++||+-- .++. .+.+.+++ +. +|.+=|+
T Consensus 122 ~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~---~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~~GaDIvKia- 196 (276)
T 3o1n_A 122 IDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQH---NVAVIMSNHDFHKTPA-AEEIVQRLRKMQELGADIPKIA- 196 (276)
T ss_dssp HHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHT---TCEEEEEEEESSCCCC-HHHHHHHHHHHHHTTCSEEEEE-
T ss_pred HHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhC---CCEEEEEeecCCCCcC-HHHHHHHHHHHHHcCCCEEEEE-
Confidence 46677889999 9999998866666677776655443 35666643 2332 23333333 33 6877776
Q ss_pred CCCCCCCC--CCChHHHHHHHHHHHHH-cCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceE--EeccCcCCCC
Q 008172 338 GDLGVDIP--LEQIPTVQEIIIHVCRQ-LNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADAL--MLSGESAIGP 412 (575)
Q Consensus 338 GDLg~e~~--~e~v~~~Qk~Ii~~c~~-~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~v--mLs~ETa~G~ 412 (575)
-+| .+++..+.+-.-+.... .++|+|.- +|=.....||- .+.+. |.-.. .|...+|=|.
T Consensus 197 -----~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~-----~MG~~G~~SRi-----~~~~~-GS~vTf~~l~~~sAPGQ 260 (276)
T 3o1n_A 197 -----VMPQTKADVLTLLTATVEMQERYADRPIITM-----SMSKTGVISRL-----AGEVF-GSAATFGAVKKASAPGA 260 (276)
T ss_dssp -----ECCSSHHHHHHHHHHHHHHHHHTCCSCCEEE-----ECSGGGTHHHH-----CHHHH-TCCEEECBSSCCSSTTC
T ss_pred -----ecCCChHHHHHHHHHHHHHHhcCCCCCEEEE-----ECCCchhhHHH-----HHHHh-CCceEecCCCCCCCCCC
Confidence 223 24555555543333333 67898862 56555566664 55543 32222 3467899999
Q ss_pred CHHHHHHHHHHHHH
Q 008172 413 FGQKAVSVLQMASS 426 (575)
Q Consensus 413 yPveaV~~m~~I~~ 426 (575)
.+++-++.+-.+..
T Consensus 261 l~~~~l~~~l~~l~ 274 (276)
T 3o1n_A 261 ISVADLRTVLTILH 274 (276)
T ss_dssp CBHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhc
Confidence 99888776555543
No 274
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=39.97 E-value=1.1e+02 Score=24.81 Aligned_cols=66 Identities=11% Similarity=-0.040 Sum_probs=38.5
Q ss_pred HHHHHhcCCcEEEEEc----CChh-HHHHHhcc--CCCCcEEEEcCcHHHHHHhcccCCcEEEEecCCCCHHHH
Q 008172 464 VDMANNLGVDAIFVYT----KHGH-MASLLSRN--RPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETN 530 (575)
Q Consensus 464 v~~a~~~~AkaIVVfT----~SG~-TAr~VSr~--RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~~d~d~~ 530 (575)
.+...+...++|++-. .+|. ..+.+.+. .|..||+++|........-.+..|+.-++.++. +.++.
T Consensus 40 ~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP~-~~~~l 112 (133)
T 3nhm_A 40 LQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKPV-KPPVL 112 (133)
T ss_dssp HHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESSC-CHHHH
T ss_pred HHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEeccC-CHHHH
Confidence 3444556778666643 2443 34455544 468999999986544445567888888887654 34443
No 275
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=39.91 E-value=1.2e+02 Score=30.22 Aligned_cols=90 Identities=13% Similarity=0.175 Sum_probs=59.8
Q ss_pred hhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 291 DSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 291 ~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
+.++.++++..+.| +.+++-+=+++.++-+.+. +|.+-||-+++ ...+ +++++.+.||||++.
T Consensus 73 ~gl~~l~~~~~~~G---l~~~te~~d~~~~~~l~~~---~d~~kIga~~~------~n~~-----ll~~~a~~~kPV~lk 135 (280)
T 2qkf_A 73 EGLKIFEKVKAEFG---IPVITDVHEPHQCQPVAEV---CDVIQLPAFLA------RQTD-----LVVAMAKTGNVVNIK 135 (280)
T ss_dssp HHHHHHHHHHHHHC---CCEEEECCSGGGHHHHHHH---CSEEEECGGGT------TBHH-----HHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHcC---CcEEEecCCHHHHHHHHhh---CCEEEECcccc------cCHH-----HHHHHHcCCCcEEEE
Confidence 33556677766665 6788888787777666654 79999985554 3333 556666889999997
Q ss_pred hhhHHhhhcCCCCChhhHhhHHHHHH-cccceEEec
Q 008172 371 SQLLESMVEYPTPTRAEVADVSEAVR-QYADALMLS 405 (575)
Q Consensus 371 Tq~LeSM~~~p~PtrAEv~Dv~nav~-~G~D~vmLs 405 (575)
|.|- -|-.|+.+.+..+. .|.+-++|-
T Consensus 136 ~G~~--------~t~~e~~~A~~~i~~~Gn~~i~L~ 163 (280)
T 2qkf_A 136 KPQF--------LSPSQMKNIVEKFHEAGNGKLILC 163 (280)
T ss_dssp CCTT--------SCGGGHHHHHHHHHHTTCCCEEEE
T ss_pred CCCC--------CCHHHHHHHHHHHHHcCCCeEEEE
Confidence 6543 25557766666554 576445554
No 276
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=39.81 E-value=96 Score=31.86 Aligned_cols=71 Identities=14% Similarity=0.072 Sum_probs=45.0
Q ss_pred CHHHHHHHHHcCCCEEEecCc---------------CChhhHHHHHHHHhccCCCCceEEe--eecCHHHHhcHHHHHhc
Q 008172 267 DWDDIEFGIAEGVDFIAMSFV---------------CDADSVRHLKKYVSGKSSRSIKVLA--KIENLESLQKFEEIVEA 329 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~SfV---------------~sa~dv~~ir~~l~~~~~~~i~IIa--KIEt~~av~nldeI~~~ 329 (575)
+.++.+.+.+.|+|+|.++.= .+..-+.++.+..... ++.||+ -|-+...+ ...+..=
T Consensus 171 t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~---~ipvIa~GGI~~g~di--~kAlalG 245 (351)
T 2c6q_A 171 TGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGL---KGHIISDGGCSCPGDV--AKAFGAG 245 (351)
T ss_dssp SHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHT---TCEEEEESCCCSHHHH--HHHHHTT
T ss_pred CHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhc---CCcEEEeCCCCCHHHH--HHHHHcC
Confidence 577888999999999988741 1122334444444322 377888 66654433 3333333
Q ss_pred CCEEEEeCCCCCC
Q 008172 330 SDGIMVARGDLGV 342 (575)
Q Consensus 330 sDgImIaRGDLg~ 342 (575)
+|++++||.=|+.
T Consensus 246 A~~V~vG~~fl~~ 258 (351)
T 2c6q_A 246 ADFVMLGGMLAGH 258 (351)
T ss_dssp CSEEEESTTTTTB
T ss_pred CCceeccHHHhcC
Confidence 9999999987753
No 277
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=39.70 E-value=92 Score=32.30 Aligned_cols=23 Identities=22% Similarity=0.358 Sum_probs=18.0
Q ss_pred CCCccCHHHH--------HHHHHcCCCEEEe
Q 008172 262 TLSKKDWDDI--------EFGIAEGVDFIAM 284 (575)
Q Consensus 262 ~lsekD~~di--------~~al~~gvd~I~~ 284 (575)
.||+.|++.+ +.+.+.|+|+|=+
T Consensus 156 ~mt~~eI~~~i~~f~~AA~~a~~aGfDgVEi 186 (376)
T 1icp_A 156 RLTTDEIPQIVNEFRVAARNAIEAGFDGVEI 186 (376)
T ss_dssp ECCTTTHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5788887666 4667899999876
No 278
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=39.46 E-value=1.3e+02 Score=35.79 Aligned_cols=127 Identities=17% Similarity=0.129 Sum_probs=84.5
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCC------------------------------CCceEEeeecCH
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSS------------------------------RSIKVLAKIENL 317 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~------------------------------~~i~IIaKIEt~ 317 (575)
.+.++.|.+.|.+.|++.--.+..-+.++.+.....|. +...++.=-+|.
T Consensus 135 ~eLv~~A~~~G~~aiAITDH~~~~G~~~~~~~a~~~gIk~I~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~hlvlLAkN~ 214 (1041)
T 3f2b_A 135 TKLIEQAKKWGHPAIAVTDHAVVQSFPEAYSAAKKHGMKVIYGLEANIVDDGVPIAYNETHRRLGSGSGPFHVTLLAQNE 214 (1041)
T ss_dssp HHHHHHHHHTTCSCEEECCBSCCTTHHHHHHHHHHHTCCEEEEEEEEEECC------------------CEEEEEEECSH
T ss_pred HHHHHHHHHCCCCEEEEecccchhhHHHHHHHHHHCCCEEEEEEEEEEEeCCcccccccccccccccCCCceEEEEeCCH
Confidence 45678899999999999988887777776655432220 001233344589
Q ss_pred HHHhcHHHHHhc--------------------CCEEEEeCCCCCCCCCC------------------------C------
Q 008172 318 ESLQKFEEIVEA--------------------SDGIMVARGDLGVDIPL------------------------E------ 347 (575)
Q Consensus 318 ~av~nldeI~~~--------------------sDgImIaRGDLg~e~~~------------------------e------ 347 (575)
+|..||-.++.. .+|+++.-|-+.-+++. .
T Consensus 215 ~Gy~nL~kLvS~a~~~~~~~~pri~~~~L~~~~egLi~~s~c~~Gev~~~l~~~~~~~a~~~~~~y~ylei~~~~~~~~l 294 (1041)
T 3f2b_A 215 TGLKNLFKLVSLSHIQYFHRVPRIPRSVLVKHRDGLLVGSGCDKGELFDNLIQKAPEEVEDIARFYDFLEVHPPDVYKPL 294 (1041)
T ss_dssp HHHHHHHHHHHHHHTTTCSSSCCEEHHHHHHTCTTEEEECCSSSSSSTTC--------CCTTGGGCSBEEECCGGGGCCC
T ss_pred HHHHHHHHHHHHHHHhcccCCCCcCHHHHHhccCCeEEEcCccccHHHHHHhcCCHHHHHHHHHHhhHHHhcCccccHHH
Confidence 999999877653 47888887655433321 0
Q ss_pred ----------ChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHccc
Q 008172 348 ----------QIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYA 399 (575)
Q Consensus 348 ----------~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~ 399 (575)
....+-+.+++.+++.|+|++. |+=. +-..|.+++..||..+...|.
T Consensus 295 ~~~~~~~~~~~~~~~~~~l~~la~~~~~p~VA-T~dv----hy~~~ed~~~~dvL~~~~~~~ 351 (1041)
T 3f2b_A 295 IEMDYVKDEEMIKNIIRSIVALGEKLDIPVVA-TGNV----HYLNPEDKIYRKILIHSQGGA 351 (1041)
T ss_dssp ----CCSCHHHHHHHHHHHHHHHHHTTCCEEE-CCCB----SBSSGGGHHHHHHHHHTTGGG
T ss_pred HhccCCCcHHHHHHHHHHHHHHHHHcCCCEEE-eCCc----eecCHhhHHHHHHHHhhcccC
Confidence 0113446889999999999985 4322 234799999999988765554
No 279
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=39.43 E-value=2e+02 Score=29.02 Aligned_cols=120 Identities=13% Similarity=0.102 Sum_probs=69.3
Q ss_pred HHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhh
Q 008172 354 EIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSR 433 (575)
Q Consensus 354 k~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 433 (575)
.-+...|++.|.|+.+-. |..+.-..+...-..|++.+...+ . .-++.+...++.++-..
T Consensus 89 ~a~A~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~v~~-----~-~~~~~~~a~~l~~~~~~--- 148 (346)
T 3l6b_A 89 QALTYAAKLEGIPAYIVV-----------PQTAPDCKKLAIQAYGASIVYCEP-----S-DESRENVAKRVTEETEG--- 148 (346)
T ss_dssp HHHHHHHHHTTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECS-----S-HHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHhCCCEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECC-----C-HHHHHHHHHHHHHhcCC---
Confidence 355677999999998742 222222344555678999876643 2 34555554444322111
Q ss_pred hhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhc-CCcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCcH
Q 008172 434 EENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNL-GVDAIFVYTKHGHMASLLSR----NRPNPPIFAFTNDD 504 (575)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~-~AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~~ 504 (575)
. ...+.. .+ .....-...+.++..++ ..+.||+.+-+|.|.--+++ .+|.+.||++-+..
T Consensus 149 -------~-~i~~~~--np-~~~~g~~t~~~Ei~~q~~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 213 (346)
T 3l6b_A 149 -------I-MVHPNQ--EP-AVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSN 213 (346)
T ss_dssp -------E-ECCSSS--CH-HHHHHHHHHHHHHHHHSTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred -------E-EECCCC--Ch-HHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCC
Confidence 0 111110 01 11122233345666666 56899999999998766554 47999999998764
No 280
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=39.38 E-value=94 Score=32.29 Aligned_cols=122 Identities=11% Similarity=0.096 Sum_probs=0.0
Q ss_pred ccCHHHHHHHH-HcCCCEEEecCc-----------CChhhHHHHHHHHhccCCCCceEEee-ecCHHHHhcHHHHHhc-C
Q 008172 265 KKDWDDIEFGI-AEGVDFIAMSFV-----------CDADSVRHLKKYVSGKSSRSIKVLAK-IENLESLQKFEEIVEA-S 330 (575)
Q Consensus 265 ekD~~di~~al-~~gvd~I~~SfV-----------~sa~dv~~ir~~l~~~~~~~i~IIaK-IEt~~av~nldeI~~~-s 330 (575)
....++...++ ..|+|.+.+-.- ++.++..+.-+.+.+.- .+.|++| +-.-...+......+. +
T Consensus 154 ~~~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~--~~PVivK~vg~g~s~e~A~~l~~aGa 231 (365)
T 3sr7_A 154 DKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKL--QLPFILKEVGFGMDVKTIQTAIDLGV 231 (365)
T ss_dssp TSCHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHC--CSCEEEEECSSCCCHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhh--CCCEEEEECCCCCCHHHHHHHHHcCC
Q ss_pred CEEEEe-CCCCCC---------------CCCCCChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHH
Q 008172 331 DGIMVA-RGDLGV---------------DIPLEQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVS 392 (575)
Q Consensus 331 DgImIa-RGDLg~---------------e~~~e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~ 392 (575)
|+|.|+ +|--+. +.+.+....+. .++.. ..|+|...-+- --.|++
T Consensus 232 d~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~-----~v~~~~~~ipvia~GGI~------------~g~Dv~ 294 (365)
T 3sr7_A 232 KTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLL-----NAQPLMDKVEILASGGIR------------HPLDII 294 (365)
T ss_dssp CEEECCCBC--------------CGGGTTCSCBHHHHHH-----HHGGGTTTSEEEECSSCC------------SHHHHH
T ss_pred CEEEEeCCCCcccchhhccccccccccccccccHHHHHH-----HHHHhcCCCeEEEeCCCC------------CHHHHH
Q ss_pred HHHHcccceEEec
Q 008172 393 EAVRQYADALMLS 405 (575)
Q Consensus 393 nav~~G~D~vmLs 405 (575)
.|+..|||+|++.
T Consensus 295 KaLalGAdaV~ig 307 (365)
T 3sr7_A 295 KALVLGAKAVGLS 307 (365)
T ss_dssp HHHHHTCSEEEES
T ss_pred HHHHcCCCEEEEC
No 281
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=39.26 E-value=97 Score=29.17 Aligned_cols=37 Identities=22% Similarity=0.322 Sum_probs=28.1
Q ss_pred HHHHHHHHHcCCCEEEecCcC------ChhhHHHHHHHHhccC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVC------DADSVRHLKKYVSGKS 304 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~------sa~dv~~ir~~l~~~~ 304 (575)
.+.++.+.+.|+|+|=+.... +..++.++++.+.+.|
T Consensus 17 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~g 59 (278)
T 1i60_A 17 KLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHH 59 (278)
T ss_dssp HHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSS
T ss_pred HHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcC
Confidence 355688889999999887222 3467888999888776
No 282
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=39.12 E-value=51 Score=33.13 Aligned_cols=64 Identities=19% Similarity=0.334 Sum_probs=48.0
Q ss_pred ccCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEe--eecCHHHHhcHHHHHhc-CCEEEEeC
Q 008172 265 KKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLA--KIENLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 265 ekD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIa--KIEt~~av~nldeI~~~-sDgImIaR 337 (575)
-.+.+.++.|++.|+|+|.+..+ ++++++++.+.++ .++.+.| =| -.+|+.++++. +|+|-++.
T Consensus 203 v~t~eea~eA~~aGaD~I~ld~~-~~~~~k~av~~v~----~~ipi~AsGGI----t~eni~~~a~tGvD~IsVgs 269 (286)
T 1x1o_A 203 VRSLEELEEALEAGADLILLDNF-PLEALREAVRRVG----GRVPLEASGNM----TLERAKAAAEAGVDYVSVGA 269 (286)
T ss_dssp ESSHHHHHHHHHHTCSEEEEESC-CHHHHHHHHHHHT----TSSCEEEESSC----CHHHHHHHHHHTCSEEECTH
T ss_pred eCCHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhC----CCCeEEEEcCC----CHHHHHHHHHcCCCEEEEcH
Confidence 34588889999999999999987 7788888877664 1344443 22 26788999888 99999853
No 283
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=39.05 E-value=3e+02 Score=27.36 Aligned_cols=65 Identities=15% Similarity=0.275 Sum_probs=41.1
Q ss_pred CCEEEEeCCCCCCCCCC-------CChHHHHHHHHHHHHHc----------CCCEEEehhhHHhhhcCCCCChhhHhhHH
Q 008172 330 SDGIMVARGDLGVDIPL-------EQIPTVQEIIIHVCRQL----------NKPVIVASQLLESMVEYPTPTRAEVADVS 392 (575)
Q Consensus 330 sDgImIaRGDLg~e~~~-------e~v~~~Qk~Ii~~c~~~----------gKPvivaTq~LeSM~~~p~PtrAEv~Dv~ 392 (575)
+|+|-+- +.+|. ++ +..-.+++++.++. ++|+++= -++.-+..|+.+++
T Consensus 166 ~d~iein-----~~sP~~~g~~~~~~-~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vK--------i~~~~~~~~~~~~a 231 (336)
T 1f76_A 166 AGYIAIN-----ISSPNTPGLRTLQY-GEALDDLLTAIKNKQNDLQAMHHKYVPIAVK--------IAPDLSEEELIQVA 231 (336)
T ss_dssp CSEEEEE-----CCCSSSTTGGGGGS-HHHHHHHHHHHHHHHHHHHHHHTSCCCEEEE--------CCSCCCHHHHHHHH
T ss_pred CCEEEEE-----ccCCCCCCcccccC-HHHHHHHHHHHHHHHHhhhhcccccCceEEE--------ecCCCCHHHHHHHH
Confidence 7998774 22332 12 44445666666654 7899973 23444556766666
Q ss_pred H-HHHcccceEEeccCc
Q 008172 393 E-AVRQYADALMLSGES 408 (575)
Q Consensus 393 n-av~~G~D~vmLs~ET 408 (575)
. +...|+|+|.+++=|
T Consensus 232 ~~l~~~Gvd~i~vsn~~ 248 (336)
T 1f76_A 232 DSLVRHNIDGVIATNTT 248 (336)
T ss_dssp HHHHHTTCSEEEECCCB
T ss_pred HHHHHcCCcEEEEeCCc
Confidence 6 456799999999754
No 284
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=39.00 E-value=30 Score=34.46 Aligned_cols=146 Identities=14% Similarity=0.103 Sum_probs=82.3
Q ss_pred CCCCccCHHH-HHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHH--------hcCC
Q 008172 261 PTLSKKDWDD-IEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIV--------EASD 331 (575)
Q Consensus 261 p~lsekD~~d-i~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~--------~~sD 331 (575)
|..|+.|++. +..|.+.|++.|++ ++..+..+++.+.. ..++|.+=|=.|.|-...+.-+ .=+|
T Consensus 54 p~~t~~~I~~lc~eA~~~~~aaVCV----~p~~V~~a~~~L~g---s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAd 126 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENRFHGVCV----NPCYVKLAREELEG---TDVKVVTVVGFPLGANETRTKAHEAIFAVESGAD 126 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEE----CGGGHHHHHHHHTT---SCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCS
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEE----CHHHHHHHHHHhcC---CCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCC
Confidence 4567777644 46788999999988 46778888888842 3467777664444443322222 1155
Q ss_pred EEEEeCCCCCCCCCC---CChHHHHHHHHHHHHHc-CCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEecc
Q 008172 332 GIMVARGDLGVDIPL---EQIPTVQEIIIHVCRQL-NKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLSG 406 (575)
Q Consensus 332 gImIaRGDLg~e~~~---e~v~~~Qk~Ii~~c~~~-gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs~ 406 (575)
.|=+ -+.++. .+...+.+.|-+.+... |+|+=+ |||+- .-|..|+..... +...|+|.|=-|.
T Consensus 127 EIDm-----ViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKV---IlEt~----~Lt~eei~~A~~ia~eaGADfVKTST 194 (260)
T 3r12_A 127 EIDM-----VINVGMLKAKEWEYVYEDIRSVVESVKGKVVKV---IIETC----YLDTEEKIAACVISKLAGAHFVKTST 194 (260)
T ss_dssp EEEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEE---ECCGG----GCCHHHHHHHHHHHHHTTCSEEECCC
T ss_pred EEEE-----EeehhhhccccHHHHHHHHHHHHHhcCCCcEEE---EEeCC----CCCHHHHHHHHHHHHHhCcCEEEcCC
Confidence 5522 122322 23333444333333322 444432 44432 346777766666 6678999998772
Q ss_pred CcCCCCCHHHHHHHHHHHH
Q 008172 407 ESAIGPFGQKAVSVLQMAS 425 (575)
Q Consensus 407 ETa~G~yPveaV~~m~~I~ 425 (575)
--..|---+|.|+.|++.+
T Consensus 195 Gf~~~GAT~edV~lm~~~v 213 (260)
T 3r12_A 195 GFGTGGATAEDVHLMKWIV 213 (260)
T ss_dssp SSSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHh
Confidence 1112233468899988764
No 285
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=38.90 E-value=2.9e+02 Score=27.83 Aligned_cols=113 Identities=19% Similarity=0.235 Sum_probs=66.7
Q ss_pred HHHHHHcCCCEEEecC---------------cCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHH-------Hh
Q 008172 271 IEFGIAEGVDFIAMSF---------------VCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEI-------VE 328 (575)
Q Consensus 271 i~~al~~gvd~I~~Sf---------------V~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI-------~~ 328 (575)
++...+.|+.+|-+=- +...+-+..++.....+...+..|+|+.|.. +.+.+|+. .+
T Consensus 104 v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~-~~~gldeai~Ra~ay~~ 182 (298)
T 3eoo_A 104 IRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAA-AAEGIDAAIERAIAYVE 182 (298)
T ss_dssp HHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhh-hhcCHHHHHHHHHhhHh
Confidence 4455667888775532 2233456777766655544679999999997 33444444 44
Q ss_pred c-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 329 A-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 329 ~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
. +|+||+- +... -+.+-+.|.+..+|+.+ +|++. -..|.+|.+|+. ..|+.-+...
T Consensus 183 AGAD~if~~--------~~~~----~ee~~~~~~~~~~Pl~~--n~~~~-g~tp~~~~~eL~------~lGv~~v~~~ 239 (298)
T 3eoo_A 183 AGADMIFPE--------AMKT----LDDYRRFKEAVKVPILA--NLTEF-GSTPLFTLDELK------GANVDIALYC 239 (298)
T ss_dssp TTCSEEEEC--------CCCS----HHHHHHHHHHHCSCBEE--ECCTT-SSSCCCCHHHHH------HTTCCEEEEC
T ss_pred cCCCEEEeC--------CCCC----HHHHHHHHHHcCCCeEE--EeccC-CCCCCCCHHHHH------HcCCeEEEEc
Confidence 4 8999993 1222 23344445566799864 33331 124566766665 4688777653
No 286
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=38.82 E-value=63 Score=32.75 Aligned_cols=60 Identities=13% Similarity=0.204 Sum_probs=36.4
Q ss_pred CCCCCCHHHHHHHHHcCCcEEEeeCCCCCH-------HHHHHHHHHHHHHhhh-cCCceEEEEeCCCC
Q 008172 98 GPACCSMEDLEKLAMGGMNVARLNMCHNTR-------EWHLDVIRKIKQLNHE-KLFCISVMIDTEGS 157 (575)
Q Consensus 98 GPas~~~e~l~~li~~G~~v~RlN~SHg~~-------e~~~~~i~~ir~~~~~-~~~~i~Il~Dl~Gp 157 (575)
|+...+.+.++.|-+.|+|++||-++.... ......++.++++-+. ...-+.+++|+-..
T Consensus 39 ~~p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vildlH~~ 106 (345)
T 3ndz_A 39 GNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHE 106 (345)
T ss_dssp SCCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCSC
T ss_pred CCCCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCc
Confidence 333447899999999999999999875421 0012233344433211 12346788888643
No 287
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=38.60 E-value=1.1e+02 Score=30.57 Aligned_cols=88 Identities=11% Similarity=0.114 Sum_probs=50.7
Q ss_pred CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHc----CCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEe
Q 008172 330 SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQL----NKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALML 404 (575)
Q Consensus 330 sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~----gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmL 404 (575)
+||+++. |- .-|.+.-. ..-.+++++.+.+. ..|||+-| ...+-.|.-+.+. |-..|+|++|+
T Consensus 42 v~gl~v~-Gt-tGE~~~Ls-~~Er~~v~~~~~~~~~g~rvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv 109 (301)
T 3m5v_A 42 IDAVVPV-GT-TGESATLT-HEEHRTCIEIAVETCKGTKVKVLAGA---------GSNATHEAVGLAKFAKEHGADGILS 109 (301)
T ss_dssp CCEEECS-ST-TTTGGGSC-HHHHHHHHHHHHHHHTTSSCEEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCEEEEC-cc-ccChhhCC-HHHHHHHHHHHHHHhCCCCCeEEEeC---------CCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 8999984 21 12222211 12234555555443 47898754 3445556555554 77789999999
Q ss_pred ccCcCCCCCHHHHHHHHHHHHHHHh
Q 008172 405 SGESAIGPFGQKAVSVLQMASSRME 429 (575)
Q Consensus 405 s~ETa~G~yPveaV~~m~~I~~~aE 429 (575)
..=--...-+-+.++..+.|++.++
T Consensus 110 ~~P~y~~~s~~~l~~~f~~va~a~~ 134 (301)
T 3m5v_A 110 VAPYYNKPTQQGLYEHYKAIAQSVD 134 (301)
T ss_dssp ECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred cCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 7443333335667777777776654
No 288
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=38.57 E-value=2.8e+02 Score=27.85 Aligned_cols=140 Identities=13% Similarity=0.147 Sum_probs=80.1
Q ss_pred cCHHHHHHHHHcCCCEEEec-------CcCChhhHHHHHHHHhccCCCCceEEeeecCHHH------------HhcHHHH
Q 008172 266 KDWDDIEFGIAEGVDFIAMS-------FVCDADSVRHLKKYVSGKSSRSIKVLAKIENLES------------LQKFEEI 326 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~S-------fV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~a------------v~nldeI 326 (575)
.+.+++..|.+.|+|.|=+- -.-|..-++.++++. ++.|.++|.-..| .+.++..
T Consensus 47 ~s~~~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~------~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~ 120 (287)
T 3iwp_A 47 DSVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSV------QIPVFVMIRPRGGDFLYSDREIEVMKADIRLA 120 (287)
T ss_dssp SSHHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTC------CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHhc------CCCeEEEEecCCCCcccCHHHHHHHHHHHHHH
Confidence 56788899999999998765 122556666666532 4778888876665 3566777
Q ss_pred Hhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 327 VEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 327 ~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
.+. +|||.+|- |.-+ +.-++. .-+++++.+. +.++-+ =.-++- .++..+. +-..+..|+|-|+.|
T Consensus 121 ~~~GAdGvVfG~--L~~d-g~iD~~-~~~~Li~~a~--~l~vTF-HRAFD~-----~~d~~~A--le~Li~lGvdrILTS 186 (287)
T 3iwp_A 121 KLYGADGLVFGA--LTED-GHIDKE-LCMSLMAICR--PLPVTF-HRAFDM-----VHDPMAA--LETLLTLGFERVLTS 186 (287)
T ss_dssp HHTTCSEEEECC--BCTT-SCBCHH-HHHHHHHHHT--TSCEEE-CGGGGG-----CSCHHHH--HHHHHHHTCSEEEEC
T ss_pred HHcCCCEEEEee--eCCC-CCcCHH-HHHHHHHHcC--CCcEEE-ECchhc-----cCCHHHH--HHHHHHcCCCEEECC
Confidence 777 99999962 2222 112222 3345566553 455543 111111 1122221 222333499999999
Q ss_pred cCcCCCCCHHHHHHHHHHHHHHH
Q 008172 406 GESAIGPFGQKAVSVLQMASSRM 428 (575)
Q Consensus 406 ~ETa~G~yPveaV~~m~~I~~~a 428 (575)
|=-.. ..+-+..++++++.+
T Consensus 187 G~~~~---a~~Gl~~Lk~Lv~~a 206 (287)
T 3iwp_A 187 GCDSS---ALEGLPLIKRLIEQA 206 (287)
T ss_dssp TTSSS---TTTTHHHHHHHHHHH
T ss_pred CCCCC---hHHhHHHHHHHHHHh
Confidence 74222 246667777665444
No 289
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=38.46 E-value=50 Score=27.79 Aligned_cols=41 Identities=17% Similarity=0.239 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------hhHHHHHhccCCCCcEEEE
Q 008172 459 ICNCAVDMANNLGVDAIFVYTKH---------GHMASLLSRNRPNPPIFAF 500 (575)
Q Consensus 459 ia~~av~~a~~~~AkaIVVfT~S---------G~TAr~VSr~RP~~PIiAv 500 (575)
.+...++.|.+.+++.||+-+.. |+++..+.+.-| |||+.+
T Consensus 87 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 136 (137)
T 2z08_A 87 PAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEAP-CPVLLV 136 (137)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHCS-SCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcCC-CCEEEe
Confidence 44555678889999999888763 678888888865 999876
No 290
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=38.01 E-value=2.5e+02 Score=25.97 Aligned_cols=106 Identities=17% Similarity=0.173 Sum_probs=64.7
Q ss_pred HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEe-----------eecCHHHHhcHHHHHhc-CCEEEEe
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLA-----------KIENLESLQKFEEIVEA-SDGIMVA 336 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIa-----------KIEt~~av~nldeI~~~-sDgImIa 336 (575)
+..+.+.+.|++++-+ .+++.++++++..+ ..++. .|.. -.+.+++.++. +|.+.+.
T Consensus 27 ~~a~~~~~~Ga~~i~~---~~~~~i~~i~~~~~------~pv~~~~~~~~~~~~~~i~~--~~~~i~~~~~~Gad~v~l~ 95 (223)
T 1y0e_A 27 KMALAAYEGGAVGIRA---NTKEDILAIKETVD------LPVIGIVKRDYDHSDVFITA--TSKEVDELIESQCEVIALD 95 (223)
T ss_dssp HHHHHHHHHTCSEEEE---ESHHHHHHHHHHCC------SCEEEECBCCCTTCCCCBSC--SHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHCCCeeecc---CCHHHHHHHHHhcC------CCEEeeeccCCCccccccCC--cHHHHHHHHhCCCCEEEEe
Confidence 3334556889999854 58888888887642 22321 1111 12345555665 8999987
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 337 RGDLGVDIPLEQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 337 RGDLg~e~~~e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
-.++. -|.+.+ .++++.+++. |+++++-. .|..| ...+...|+|.++.+
T Consensus 96 ~~~~~--~p~~~~----~~~i~~~~~~~~~~~v~~~~-----------~t~~e---~~~~~~~G~d~i~~~ 146 (223)
T 1y0e_A 96 ATLQQ--RPKETL----DELVSYIRTHAPNVEIMADI-----------ATVEE---AKNAARLGFDYIGTT 146 (223)
T ss_dssp CSCSC--CSSSCH----HHHHHHHHHHCTTSEEEEEC-----------SSHHH---HHHHHHTTCSEEECT
T ss_pred eeccc--CcccCH----HHHHHHHHHhCCCceEEecC-----------CCHHH---HHHHHHcCCCEEEeC
Confidence 44321 111222 4677888887 88887532 23333 445778999999875
No 291
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=37.95 E-value=37 Score=35.62 Aligned_cols=63 Identities=19% Similarity=0.280 Sum_probs=39.4
Q ss_pred CHHHHHHHHHcCCCEEEecCcC---------ChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc----CCEE
Q 008172 267 DWDDIEFGIAEGVDFIAMSFVC---------DADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA----SDGI 333 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~SfV~---------sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~----sDgI 333 (575)
+.++.+.+.+.|+|+|.+|.-- +.+-+.++++.+. +++.||+- -||.+-.++++. +|++
T Consensus 262 ~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~----~~ipVia~----GGI~~g~Dv~kalalGAd~V 333 (392)
T 2nzl_A 262 RGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVE----GKVEVFLD----GGVRKGTDVLKALALGAKAV 333 (392)
T ss_dssp CHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHT----TSSEEEEC----SSCCSHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcC----CCCEEEEE----CCCCCHHHHHHHHHhCCCee
Confidence 4677889999999999997421 1233344444442 34666652 345554455444 8999
Q ss_pred EEeC
Q 008172 334 MVAR 337 (575)
Q Consensus 334 mIaR 337 (575)
||||
T Consensus 334 ~iGr 337 (392)
T 2nzl_A 334 FVGR 337 (392)
T ss_dssp EECH
T ss_pred EECH
Confidence 9987
No 292
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=37.88 E-value=3.2e+02 Score=27.29 Aligned_cols=113 Identities=19% Similarity=0.265 Sum_probs=67.2
Q ss_pred HHHHHHHHcCCCEEEec-----------------CcCChhhHHHHHHHHhccCCCCceEEeeecCH-------HHHhcHH
Q 008172 269 DDIEFGIAEGVDFIAMS-----------------FVCDADSVRHLKKYVSGKSSRSIKVLAKIENL-------ESLQKFE 324 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S-----------------fV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~-------~av~nld 324 (575)
+.++..++.|+++|-+= .+...+-+..++.....+......|+++.|.. ++++...
T Consensus 94 ~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ 173 (290)
T 2hjp_A 94 YVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEAVRRGQ 173 (290)
T ss_dssp HHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHHHHHHH
T ss_pred HHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHHHHHHH
Confidence 34455567888887652 12222446667766554322458999999975 5666666
Q ss_pred HHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcC--CCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcc-cc
Q 008172 325 EIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLN--KPVIVASQLLESMVEYPTPTRAEVADVSEAVRQY-AD 400 (575)
Q Consensus 325 eI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~g--KPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G-~D 400 (575)
...+. +|+||+ |...+....+ + +.|.+.. .|+++ .| ...|.+|.+|+. ..| +.
T Consensus 174 ay~eAGAd~i~~-------e~~~~~~~~~-~---~i~~~~~~~vP~i~--n~----~~~~~~~~~eL~------~lG~v~ 230 (290)
T 2hjp_A 174 AYEEAGADAILI-------HSRQKTPDEI-L---AFVKSWPGKVPLVL--VP----TAYPQLTEADIA------ALSKVG 230 (290)
T ss_dssp HHHHTTCSEEEE-------CCCCSSSHHH-H---HHHHHCCCSSCEEE--CG----GGCTTSCHHHHH------TCTTEE
T ss_pred HHHHcCCcEEEe-------CCCCCCHHHH-H---HHHHHcCCCCCEEE--ec----cCCCCCCHHHHH------hcCCee
Confidence 66665 899999 3323332222 3 3355556 89885 33 333677766665 457 76
Q ss_pred eEEe
Q 008172 401 ALML 404 (575)
Q Consensus 401 ~vmL 404 (575)
-+..
T Consensus 231 ~v~~ 234 (290)
T 2hjp_A 231 IVIY 234 (290)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6554
No 293
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=37.62 E-value=1.1e+02 Score=31.59 Aligned_cols=63 Identities=10% Similarity=0.137 Sum_probs=41.6
Q ss_pred CceEEEecCCCCCCH-------HHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeCC
Q 008172 90 KTKMVCTIGPACCSM-------EDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTE 155 (575)
Q Consensus 90 ~tkIi~TiGPas~~~-------e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~ 155 (575)
+....+++|-...++ +..+++.++|.+.+.+...|++.+.-.++++.+|++ .|..+.|++|..
T Consensus 123 ~vp~~~~~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a---~G~d~~l~vDan 192 (382)
T 2gdq_A 123 EIPVYASFQSYSDSPQWISRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHT---AGSSITMILDAN 192 (382)
T ss_dssp EEEEEEECCCBCSSTTHHHHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHH---HCTTSEEEEECT
T ss_pred ceeEEEEecccCCCcccHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHh---hCCCCEEEEECC
Confidence 445555564222344 345677889999999999998877777777777764 344456666653
No 294
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=37.43 E-value=1.2e+02 Score=25.50 Aligned_cols=75 Identities=11% Similarity=0.150 Sum_probs=46.4
Q ss_pred HHHHHHhcCCcEEEEEcC----Chh-HHHHHhccCCCCcEEEEcCcHH--HHHHhcccCCcEEEEecCCCCHHHHHHHHH
Q 008172 463 AVDMANNLGVDAIFVYTK----HGH-MASLLSRNRPNPPIFAFTNDDS--TRMALNLQWGVIPVLVNLSDDMETNIAKTI 535 (575)
Q Consensus 463 av~~a~~~~AkaIVVfT~----SG~-TAr~VSr~RP~~PIiAvT~~~~--~aR~L~L~~GV~Pvl~~~~~d~d~~i~~al 535 (575)
|.+...+...+.|++-.. +|. .++.+-+..|.+|||++|.... ...++ +..|+.-++.+.. +.++ +..++
T Consensus 58 al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~-~~~g~~~~l~Kp~-~~~~-l~~~i 134 (150)
T 4e7p_A 58 AIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERA-VKAGVDAYVLKER-SIAD-LMQTL 134 (150)
T ss_dssp HHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHH-HHTTCSEEEETTS-CHHH-HHHHH
T ss_pred HHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHH-HHCCCcEEEecCC-CHHH-HHHHH
Confidence 344455667786666432 343 4566767789999999997654 33333 6778888888755 3444 34445
Q ss_pred HHHHH
Q 008172 536 DLIKM 540 (575)
Q Consensus 536 ~~~~~ 540 (575)
..+.+
T Consensus 135 ~~~~~ 139 (150)
T 4e7p_A 135 HTVLE 139 (150)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 44443
No 295
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=37.36 E-value=1.2e+02 Score=28.01 Aligned_cols=60 Identities=13% Similarity=0.116 Sum_probs=41.9
Q ss_pred EecCCEEEEEeec--cCCC--CCcEEEeccccccc--ccCCCCEEEEe--CCe-eEEEEEEEECCeEEE
Q 008172 172 VEEDSIWLFTAIK--FEGS--RPFTVKANYAGFSE--GIEVGDELVID--GGM-ASFEVIEKVGNDLRC 231 (575)
Q Consensus 172 l~~G~~v~lt~~~--~~~~--~~~~i~v~~~~l~~--~v~~Gd~IliD--DG~-i~l~V~~~~~~~i~~ 231 (575)
.+.|++.+|+... ..|. ......++.+.|.. .+++|+.+.+. ||. +..+|+++.++.++.
T Consensus 75 m~~Ge~~~v~Ipp~~AYG~~~~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~V~v 143 (169)
T 4dt4_A 75 LKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITV 143 (169)
T ss_dssp CCTTCEEEEEECGGGTTCCCCGGGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEEETTEEEE
T ss_pred CCCCCEEEEEEChHHhcCCCChHHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEEcCCEEEE
Confidence 4689999887754 2332 12455677777764 47899999996 454 778999999887653
No 296
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=37.16 E-value=39 Score=28.87 Aligned_cols=44 Identities=18% Similarity=0.118 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC--------hhHHHHHhccCCCCcEEEEcCc
Q 008172 459 ICNCAVDMANNLGVDAIFVYTKH--------GHMASLLSRNRPNPPIFAFTND 503 (575)
Q Consensus 459 ia~~av~~a~~~~AkaIVVfT~S--------G~TAr~VSr~RP~~PIiAvT~~ 503 (575)
.+...++.|.+.+++.||+-++. |+++..+.+.-| ||++.+-++
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv~~~ 148 (150)
T 3tnj_A 97 PREEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAK-CDVLAVRLR 148 (150)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCS-SEEEEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCC-CCEEEEeCC
Confidence 44555678889999988887752 667888888776 999988554
No 297
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=37.07 E-value=20 Score=34.52 Aligned_cols=82 Identities=9% Similarity=-0.037 Sum_probs=51.1
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVDIPL 346 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e~~~ 346 (575)
.+..+.+.+.|+|++.+|= ..++++..+|+.+. +-+.+..-|--+ + .++.+.++. +|.+.|||+=+..+=|.
T Consensus 118 ~~~a~~a~~~G~~GvV~sa-t~~~e~~~ir~~~~----~f~~v~pGI~~~-g-~~~~~a~~~Gad~iVvGr~I~~a~dp~ 190 (215)
T 3ve9_A 118 PYLREVARRVNPKGFVAPA-TRPSMISRVKGDFP----DKLVISPGVGTQ-G-AKPGIALCHGADYEIVGRSVYQSADPV 190 (215)
T ss_dssp HHHHHHHHHHCCSEEECCT-TSHHHHHHHHHHCT----TSEEEECCTTST-T-CCTTHHHHTTCSEEEECHHHHTSSSHH
T ss_pred HHHHHHHHHcCCCceeeCC-CCHHHHHHHHHhCC----CcEEEcCCCCcC-c-CCHHHHHHcCCCEEEeCHHHcCCCCHH
Confidence 3455678889999998762 34788988888763 212222444221 1 145555555 99999999888776655
Q ss_pred CChHHHHHHH
Q 008172 347 EQIPTVQEII 356 (575)
Q Consensus 347 e~v~~~Qk~I 356 (575)
+....+.+.+
T Consensus 191 ~a~~~i~~~i 200 (215)
T 3ve9_A 191 RKLEEIVRSQ 200 (215)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444433
No 298
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=37.02 E-value=53 Score=31.25 Aligned_cols=132 Identities=10% Similarity=0.053 Sum_probs=66.6
Q ss_pred cCHHHHHHHHHcCCCEEEecC--cCChhhHHHHHHHHhccCCCCceEEe-----eecCH--------HHHhcHHHHHhc-
Q 008172 266 KDWDDIEFGIAEGVDFIAMSF--VCDADSVRHLKKYVSGKSSRSIKVLA-----KIENL--------ESLQKFEEIVEA- 329 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~Sf--V~sa~dv~~ir~~l~~~~~~~i~IIa-----KIEt~--------~av~nldeI~~~- 329 (575)
.+.+++..+++.|+|+|.+.- ..+++.+.++ +.+ + ..+.+-. +++.. ...+-..++.+.
T Consensus 83 ~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~-~~~---g-~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G 157 (241)
T 1qo2_A 83 RSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSL-REI---D-VEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYG 157 (241)
T ss_dssp CSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHH-HTT---T-CEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHCCCCEEEECchHhhChHHHHHH-HHc---C-CcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCC
Confidence 456788888999999998853 3455555555 333 2 2222212 22221 122223334344
Q ss_pred CCEEEEeCCC-CCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHH--Hcc-cceEEec
Q 008172 330 SDGIMVARGD-LGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAV--RQY-ADALMLS 405 (575)
Q Consensus 330 sDgImIaRGD-Lg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav--~~G-~D~vmLs 405 (575)
++.|++..-+ =|...+. ++ ..-+++ +.....||+... ..-+.+++.++..+- .+| +|+++..
T Consensus 158 ~~~i~~t~~~~~g~~~g~-~~-~~i~~l---~~~~~iPvia~G---------GI~~~~d~~~~~~~~~~~~G~adgv~vg 223 (241)
T 1qo2_A 158 LEEIVHTEIEKDGTLQEH-DF-SLTKKI---AIEAEVKVLAAG---------GISSENSLKTAQKVHTETNGLLKGVIVG 223 (241)
T ss_dssp CCEEEEEETTHHHHTCCC-CH-HHHHHH---HHHHTCEEEEES---------SCCSHHHHHHHHHHHHHTTTSEEEEEEC
T ss_pred CCEEEEEeecccccCCcC-CH-HHHHHH---HHhcCCcEEEEC---------CCCCHHHHHHHHhcccccCCeEeEEEee
Confidence 6878774210 0111122 22 222333 334489999754 344555454443320 119 9999987
Q ss_pred cCcCCCCCHHH
Q 008172 406 GESAIGPFGQK 416 (575)
Q Consensus 406 ~ETa~G~yPve 416 (575)
.---.|.++++
T Consensus 224 sal~~~~~~~~ 234 (241)
T 1qo2_A 224 RAFLEGILTVE 234 (241)
T ss_dssp HHHHTTSSCHH
T ss_pred HHHHcCCCCHH
Confidence 44444555544
No 299
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=36.94 E-value=37 Score=36.28 Aligned_cols=48 Identities=23% Similarity=0.376 Sum_probs=38.4
Q ss_pred EEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHH
Q 008172 93 MVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQL 140 (575)
Q Consensus 93 Ii~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~ 140 (575)
+.+-+|+.....+.++.|+++|++++=++++||......+.++.+|+.
T Consensus 228 vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~ 275 (494)
T 1vrd_A 228 VGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD 275 (494)
T ss_dssp CEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred cccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH
Confidence 334567655668899999999999999999999887777777777754
No 300
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=36.62 E-value=2.1e+02 Score=29.07 Aligned_cols=116 Identities=15% Similarity=0.127 Sum_probs=68.7
Q ss_pred HHHHHHHHcCCCEEEec---------------CcCChhhHHHHHHHHhccCCCCceEEeeecCH------HHHhcHHHHH
Q 008172 269 DDIEFGIAEGVDFIAMS---------------FVCDADSVRHLKKYVSGKSSRSIKVLAKIENL------ESLQKFEEIV 327 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S---------------fV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~------~av~nldeI~ 327 (575)
+.++..++.|+++|-+= .+...+-+..++.....+......|+++.|.. ++++......
T Consensus 120 ~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~Ra~Ay~ 199 (318)
T 1zlp_A 120 RFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRRANLYK 199 (318)
T ss_dssp HHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHHHHHHHH
Confidence 44556677898888652 12222455566665554422468999999985 3555555555
Q ss_pred hc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 328 EA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 328 ~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
+. +|+||+- . .+.. +.+-+.|.+...|+.+ +|++. -..|.++.+|+. ..|+.-+...
T Consensus 200 eAGAd~i~~e-------~-~~~~----e~~~~i~~~l~~P~la--n~~~~-g~~~~~~~~eL~------~lGv~~v~~~ 257 (318)
T 1zlp_A 200 EAGADATFVE-------A-PANV----DELKEVSAKTKGLRIA--NMIEG-GKTPLHTPEEFK------EMGFHLIAHS 257 (318)
T ss_dssp HTTCSEEEEC-------C-CCSH----HHHHHHHHHSCSEEEE--EECTT-SSSCCCCHHHHH------HHTCCEEEEC
T ss_pred HcCCCEEEEc-------C-CCCH----HHHHHHHHhcCCCEEE--EeccC-CCCCCCCHHHHH------HcCCeEEEEc
Confidence 55 8999993 2 2221 2333456667799764 34431 134677776665 4578776653
No 301
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=36.34 E-value=1.2e+02 Score=33.89 Aligned_cols=96 Identities=11% Similarity=0.206 Sum_probs=70.5
Q ss_pred ccCHHHHHHHHHcCCCEEEecCcC------------ChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc---
Q 008172 265 KKDWDDIEFGIAEGVDFIAMSFVC------------DADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA--- 329 (575)
Q Consensus 265 ekD~~di~~al~~gvd~I~~SfV~------------sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~--- 329 (575)
+.-+..|+||.++|.++|.+--=- -..|+.++.+|.+++| +.|+.--|+..--+++++.++.
T Consensus 309 ~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kg---V~i~lw~~~~~~~~~~~~~~~~~~~ 385 (641)
T 3a24_A 309 PTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKN---VGIILWAGYHAFERDMENVCRHYAE 385 (641)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTT---CEEEEEEEHHHHHTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcC---CEEEEEeeCcchHHHHHHHHHHHHH
Confidence 334788999999999999862110 1257999999998876 8899999886645567877776
Q ss_pred --CCEEEEeCCCCCCCCCC--CChHHHHHHHHHHHHHcCCCEEE
Q 008172 330 --SDGIMVARGDLGVDIPL--EQIPTVQEIIIHVCRQLNKPVIV 369 (575)
Q Consensus 330 --sDgImIaRGDLg~e~~~--e~v~~~Qk~Ii~~c~~~gKPviv 369 (575)
.|||-++= ++- ........++++.|.+++.-|..
T Consensus 386 ~Gv~gvK~Df------~~~~~Q~~v~~y~~i~~~aA~~~l~V~f 423 (641)
T 3a24_A 386 MGVKGFKVDF------MDRDDQEMTAFNYRAAEMCAKYKLILDL 423 (641)
T ss_dssp HTCCEEEEEC------CCCCSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCEEEECC------CCCCcHHHHHHHHHHHHHHHHcCCEEEc
Confidence 79998851 122 34555667999999999976654
No 302
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=36.32 E-value=69 Score=34.41 Aligned_cols=57 Identities=12% Similarity=0.166 Sum_probs=35.2
Q ss_pred CCCHHHHHHHHHcCCcEEEeeCCCCC-------HHHHHHHHHHHHHHhhh-cCCceEEEEeCCCC
Q 008172 101 CCSMEDLEKLAMGGMNVARLNMCHNT-------REWHLDVIRKIKQLNHE-KLFCISVMIDTEGS 157 (575)
Q Consensus 101 s~~~e~l~~li~~G~~v~RlN~SHg~-------~e~~~~~i~~ir~~~~~-~~~~i~Il~Dl~Gp 157 (575)
..+.+.|+.|-+.|+|++||-++... .....+.++.++++-+. ..+-+.+++|+-..
T Consensus 45 ~~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~Gi~vildlH~~ 109 (515)
T 3icg_A 45 MTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHE 109 (515)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCSC
T ss_pred cCCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCC
Confidence 34689999999999999999887532 11112233344433221 12347788898654
No 303
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=36.21 E-value=1.4e+02 Score=30.14 Aligned_cols=125 Identities=11% Similarity=0.037 Sum_probs=71.1
Q ss_pred HHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhh
Q 008172 353 QEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWS 432 (575)
Q Consensus 353 Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~ 432 (575)
=.-+...|+..|.|+.+.. |..+....+...-..|++.+...++. .| -++++...++.++-+.+
T Consensus 84 g~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~- 147 (334)
T 3tbh_A 84 GVSLAHLGAIRGYKVIITM-----------PESMSLERRCLLRIFGAEVILTPAAL---GM-KGAVAMAKKIVAANPNA- 147 (334)
T ss_dssp HHHHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTE-
T ss_pred HHHHHHHHHHhCCCEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCCC---Cc-hHHHHHHHHHHHhCCCE-
Confidence 3456778899999998742 33333344555667999988776441 22 34444333332221111
Q ss_pred hhhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhc--CCcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCcH
Q 008172 433 REENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNL--GVDAIFVYTKHGHMASLLSR----NRPNPPIFAFTNDD 504 (575)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~--~AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~~ 504 (575)
+ ...+.. .+.+...-....+.++..++ ..+.||+.+-+|.|+--+++ ..|...|+++.+..
T Consensus 148 --------~-~i~~~~--np~n~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 214 (334)
T 3tbh_A 148 --------V-LADQFA--TKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTE 214 (334)
T ss_dssp --------E-ECCTTT--CHHHHHHHHHTHHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEETT
T ss_pred --------E-ECCccC--ChhHHHHHHHHHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCC
Confidence 0 111110 01111111223456777776 46999999999998765554 47999999996543
No 304
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=36.14 E-value=3.5e+02 Score=29.27 Aligned_cols=118 Identities=14% Similarity=0.102 Sum_probs=68.0
Q ss_pred HHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhh
Q 008172 355 IIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSRE 434 (575)
Q Consensus 355 ~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 434 (575)
-+...|++.|.|+.+. .|...-...+...-..|++.+.. + ...-++.+...+++++-..
T Consensus 93 avA~aa~~lGi~~~Iv-----------mP~~~p~~Kv~~~r~~GAeVvlv-~-----~~~dda~~~a~ela~e~g~---- 151 (514)
T 1tdj_A 93 GVAFSSARLGVKALIV-----------MPTATADIKVDAVRGFGGEVLLH-G-----ANFDEAKAKAIELSQQQGF---- 151 (514)
T ss_dssp HHHHHHHHTTCCEEEE-----------CCSSCCHHHHHHHHHHSCEEECC-C-----SSHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHCCCEEEEE-C-----CCHHHHHHHHHHHHHhcCC----
Confidence 3567788999999984 12222233455556789986653 2 2234565544443322110
Q ss_pred hhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcC-CcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCc
Q 008172 435 ENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLG-VDAIFVYTKHGHMASLLSR----NRPNPPIFAFTND 503 (575)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~-AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~ 503 (575)
. ...+.. .+. ....-..-+.++..+++ .++|||.+-+|.++--+++ .+|...||+|.+.
T Consensus 152 ------~-~v~pfd--np~-~iaGqgTig~EI~eQl~~~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep~ 215 (514)
T 1tdj_A 152 ------T-WVPPFD--HPM-VIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAE 215 (514)
T ss_dssp ------E-ECCSSC--CHH-HHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEET
T ss_pred ------E-eeCCCC--CHH-HHHHHHHHHHHHHHHCCCCCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEecc
Confidence 0 111111 011 11112223667777764 7999999999998766665 4799999999874
No 305
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=36.09 E-value=1.4e+02 Score=24.64 Aligned_cols=76 Identities=16% Similarity=0.152 Sum_probs=45.4
Q ss_pred HHHHhcCCcEEEEEc----CChh-HHHHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecCCC--CHHHHHHHHHHH
Q 008172 465 DMANNLGVDAIFVYT----KHGH-MASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSD--DMETNIAKTIDL 537 (575)
Q Consensus 465 ~~a~~~~AkaIVVfT----~SG~-TAr~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~~--d~d~~i~~al~~ 537 (575)
....+...+.|++-. .+|. .++.+.+..|..||+.+|.......+. +..|+.-++.+... .....++.++..
T Consensus 49 ~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~-~~~g~~~~l~KP~~~~~l~~~i~~~~~~ 127 (143)
T 2qv0_A 49 KFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEA-FELEAFDYILKPYQESRIINMLQKLTTA 127 (143)
T ss_dssp HHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEEEEESCCTTHHHH-HHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceEEEEeCCHHHHHHH-HhCCcceEEeCCCCHHHHHHHHHHHHHH
Confidence 334445677666542 2443 456666666778899999876554443 67888888877553 233344555544
Q ss_pred HHHc
Q 008172 538 IKMK 541 (575)
Q Consensus 538 ~~~~ 541 (575)
..+.
T Consensus 128 ~~~~ 131 (143)
T 2qv0_A 128 WEQQ 131 (143)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 4443
No 306
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=36.06 E-value=1.9e+02 Score=28.81 Aligned_cols=81 Identities=14% Similarity=0.178 Sum_probs=52.2
Q ss_pred CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcC-CCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCc
Q 008172 330 SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLN-KPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGES 408 (575)
Q Consensus 330 sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~g-KPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ET 408 (575)
.|.||--....|...|+.+ +..-+.+++. ... .|||++-. .-|. +|++.+...|+|+|++..=-
T Consensus 146 ~~aVmPlg~pIGsG~Gi~~-~~~L~~i~~~--~~~~vPVI~~GG---------I~tp---sDAa~AmeLGAdgVlVgSAI 210 (268)
T 2htm_A 146 TATVMPLAAPIGSGWGVRT-RALLELFARE--KASLPPVVVDAG---------LGLP---SHAAEVMELGLDAVLVNTAI 210 (268)
T ss_dssp CSCBEEBSSSTTTCCCSTT-HHHHHHHHHT--TTTSSCBEEESC---------CCSH---HHHHHHHHTTCCEEEESHHH
T ss_pred CCEEEecCccCcCCcccCC-HHHHHHHHHh--cCCCCeEEEeCC---------CCCH---HHHHHHHHcCCCEEEEChHH
Confidence 6777664444555555555 4443333221 134 79998643 3333 47799999999999998766
Q ss_pred CCCCCHHHHHHHHHHHH
Q 008172 409 AIGPFGQKAVSVLQMAS 425 (575)
Q Consensus 409 a~G~yPveaV~~m~~I~ 425 (575)
+.++.|.+-.+.|..-+
T Consensus 211 ~~a~dP~~ma~af~~Av 227 (268)
T 2htm_A 211 AEAQDPPAMAEAFRLAV 227 (268)
T ss_dssp HTSSSHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHH
Confidence 77888987766666543
No 307
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=36.05 E-value=48 Score=33.47 Aligned_cols=78 Identities=12% Similarity=0.115 Sum_probs=50.4
Q ss_pred HHHHHHcCCCEEEecCc----CChhhHHHHHHHHhccCCCC-ceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCC
Q 008172 271 IEFGIAEGVDFIAMSFV----CDADSVRHLKKYVSGKSSRS-IKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVDI 344 (575)
Q Consensus 271 i~~al~~gvd~I~~SfV----~sa~dv~~ir~~l~~~~~~~-i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e~ 344 (575)
.+.+.+.|+|+|-+.+. .+.+++.++.+......... +.++.=+-..+-++++.+.++. ++|+.+||.=+.-.+
T Consensus 183 a~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~~ 262 (304)
T 1to3_A 183 AKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSSVI 262 (304)
T ss_dssp HHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGGGT
T ss_pred HHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCccc
Confidence 56677899999999984 45667766666543321122 3344445333556778888777 999999998775544
Q ss_pred CCCC
Q 008172 345 PLEQ 348 (575)
Q Consensus 345 ~~e~ 348 (575)
+.++
T Consensus 263 ~~~d 266 (304)
T 1to3_A 263 GLPD 266 (304)
T ss_dssp TCSC
T ss_pred cCCC
Confidence 3344
No 308
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=35.84 E-value=25 Score=36.96 Aligned_cols=87 Identities=21% Similarity=0.181 Sum_probs=58.8
Q ss_pred CccCHHHHHHHHHc-CCCEEEecC-------cCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEE
Q 008172 264 SKKDWDDIEFGIAE-GVDFIAMSF-------VCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMV 335 (575)
Q Consensus 264 sekD~~di~~al~~-gvd~I~~Sf-------V~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImI 335 (575)
.+.|...|+.+.+. |+++|-++. +-+.+++.++++.+.+.| .-++-+|+... -+.|..
T Consensus 29 g~~d~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~G----L~i~~i~s~~~---~~~i~~------- 94 (386)
T 3bdk_A 29 GKKDPVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAG----LEITVIESIPV---HEDIKQ------- 94 (386)
T ss_dssp CTTCSSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTT----CEEEEEECCCC---CHHHHT-------
T ss_pred CCCCHHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcC----CEEEEEecccc---cccccc-------
Confidence 44677788999999 999998762 557789999999999877 23444554110 011111
Q ss_pred eCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 336 ARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 336 aRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
+.. ..++.....++.|+.|.+.|.++++.
T Consensus 95 ~~~------~r~~~ie~~k~~i~~aa~lGi~~v~~ 123 (386)
T 3bdk_A 95 GKP------NRDALIENYKTSIRNVGAAGIPVVCY 123 (386)
T ss_dssp TCT------THHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred CcH------HHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 100 12445566779999999999999985
No 309
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=35.82 E-value=1.8e+02 Score=28.68 Aligned_cols=122 Identities=11% Similarity=0.036 Sum_probs=70.6
Q ss_pred HHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhh
Q 008172 355 IIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSRE 434 (575)
Q Consensus 355 ~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 434 (575)
-+...|+..|.++.+.. |..+....+...-..|++.+...++. .| -++.+...++.++ +.+
T Consensus 76 a~A~~a~~~G~~~~i~~-----------p~~~~~~k~~~~~~~Ga~V~~~~~~~---~~-~~~~~~a~~l~~~-~~~--- 136 (304)
T 1ve1_A 76 GLAMIAASRGYRLILTM-----------PAQMSEERKRVLKAFGAELVLTDPER---RM-LAAREEALRLKEE-LGA--- 136 (304)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTCCHHHHHHHHHTTCEEEEECTTT---HH-HHHHHHHHHHHHH-HTC---
T ss_pred HHHHHHHHcCCcEEEEe-----------CCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHhc-CCC---
Confidence 46677899999998742 22222334455567899988765431 13 3555544444322 111
Q ss_pred hhhHHhhhcccccCCCCCCchhhH-HHHHHHHHHHhcC--CcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCcHH
Q 008172 435 ENRQSALCGQRQLGESLHDRIAEQ-ICNCAVDMANNLG--VDAIFVYTKHGHMASLLSR----NRPNPPIFAFTNDDS 505 (575)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~-ia~~av~~a~~~~--AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~~~ 505 (575)
+ ...+. ..+.. ... ....+.++..+++ .+.||+.+-+|.++--+++ ..|...|+++.+...
T Consensus 137 ------~-~~~~~--~n~~~-~~g~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~ 204 (304)
T 1ve1_A 137 ------F-MPDQF--KNPAN-VRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARS 204 (304)
T ss_dssp ------B-CCCTT--TCHHH-HHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGG
T ss_pred ------E-eCCCC--CChhH-HHHHHHHHHHHHHHHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEecCCC
Confidence 1 11111 00111 112 2334567777774 6999999999998766554 479999999987553
No 310
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=35.72 E-value=1.6e+02 Score=29.96 Aligned_cols=78 Identities=13% Similarity=0.191 Sum_probs=44.7
Q ss_pred CCceEEeeecCH------HHHhcHHHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHc-CCCEEEehhhHHhh
Q 008172 306 RSIKVLAKIENL------ESLQKFEEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQL-NKPVIVASQLLESM 377 (575)
Q Consensus 306 ~~i~IIaKIEt~------~av~nldeI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~-gKPvivaTq~LeSM 377 (575)
.+..|+|+.|.. ++++....-.+. +|+||+- +.... . .+-+.|.+. ++|+.+ +|++.
T Consensus 161 ~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~--------~~~~~-~---~~~~i~~~~~~~Pv~~--n~~~~- 225 (307)
T 3lye_A 161 SDFVLIARTDALQSLGYEECIERLRAARDEGADVGLLE--------GFRSK-E---QAAAAVAALAPWPLLL--NSVEN- 225 (307)
T ss_dssp CCCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEEC--------CCSCH-H---HHHHHHHHHTTSCBEE--EEETT-
T ss_pred CCeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEec--------CCCCH-H---HHHHHHHHccCCceeE--EeecC-
Confidence 568899999986 455555555555 8999993 22332 2 233334444 589854 22321
Q ss_pred hcCCCCChhhHhhHHHHHHcccceEEe
Q 008172 378 VEYPTPTRAEVADVSEAVRQYADALML 404 (575)
Q Consensus 378 ~~~p~PtrAEv~Dv~nav~~G~D~vmL 404 (575)
-..|..|.+|+. ..|+.-+..
T Consensus 226 g~~p~~t~~eL~------~lGv~~v~~ 246 (307)
T 3lye_A 226 GHSPLITVEEAK------AMGFRIMIF 246 (307)
T ss_dssp SSSCCCCHHHHH------HHTCSEEEE
T ss_pred CCCCCCCHHHHH------HcCCeEEEE
Confidence 123455665555 358876654
No 311
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=35.59 E-value=2.4e+02 Score=28.30 Aligned_cols=119 Identities=12% Similarity=0.130 Sum_probs=69.6
Q ss_pred HHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhh
Q 008172 354 EIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSR 433 (575)
Q Consensus 354 k~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 433 (575)
.-+...|+..|.++.+.. |.......+...-..|++.+...+ .| -++.+...++.++- .+
T Consensus 101 ~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~-----~~-~~~~~~a~~l~~~~-~~-- 160 (342)
T 2gn0_A 101 QGVSLSCAMLGIDGKVVM-----------PKGAPKSKVAATCDYSAEVVLHGD-----NF-NDTIAKVSEIVETE-GR-- 160 (342)
T ss_dssp HHHHHHHHHHTCCEEEEE-----------CTTSCHHHHHHHHHHSCEEEECCS-----SH-HHHHHHHHHHHHHH-CC--
T ss_pred HHHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhc-CC--
Confidence 356678889999998742 322223345556678998775432 23 35555444433221 10
Q ss_pred hhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcC-CcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCc
Q 008172 434 EENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLG-VDAIFVYTKHGHMASLLSR----NRPNPPIFAFTND 503 (575)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~-AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~ 503 (575)
+ ...+.. .+ .........+.++..+++ .+.||+.+-+|.|+--+++ ..|...|+++.+.
T Consensus 161 -------~-~~~~~~--n~-~~~~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~ 224 (342)
T 2gn0_A 161 -------I-FIPPYD--DP-KVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAE 224 (342)
T ss_dssp -------E-ECCSSS--SH-HHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEET
T ss_pred -------E-EeCCCC--CH-HHHHHHHHHHHHHHHHcCCCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEeC
Confidence 1 111111 01 112223334667777774 7999999999998766554 5799999999875
No 312
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=35.30 E-value=1.7e+02 Score=27.48 Aligned_cols=99 Identities=16% Similarity=0.257 Sum_probs=55.6
Q ss_pred HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeee------c-CHHHHhcHHHHHhcCCEEEEeCCCCC
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKI------E-NLESLQKFEEIVEASDGIMVARGDLG 341 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKI------E-t~~av~nldeI~~~sDgImIaRGDLg 341 (575)
+.++.+.+.|++.++..- .+.++...+.++..+.. ++....-+ + +.+.++.+++.+.....-.+|=|..|
T Consensus 23 ~~l~~~~~~Gv~~~v~~~-~~~~~~~~~~~l~~~~~--~~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~~~iGEiG 99 (259)
T 1zzm_A 23 ASLQRAAQAGVGKIIVPA-TEAENFARVLALAENYQ--PLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIG 99 (259)
T ss_dssp HHHHHHHHTTEEEEEEEC-CSGGGHHHHHHHHHHCT--TEEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSSEEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEec-CCHHHHHHHHHHHHhCC--CeEEEEEecccccccCCHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 556778889999876542 34677777777654432 22222222 1 22445556555543111223346666
Q ss_pred CCCCCC-ChHHHHH----HHHHHHHHcCCCEEEe
Q 008172 342 VDIPLE-QIPTVQE----IIIHVCRQLNKPVIVA 370 (575)
Q Consensus 342 ~e~~~e-~v~~~Qk----~Ii~~c~~~gKPviva 370 (575)
+++... .-...|+ ..++.|.+.|+||++=
T Consensus 100 ld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH 133 (259)
T 1zzm_A 100 LDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILH 133 (259)
T ss_dssp EECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 665332 1234554 5667799999999973
No 313
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=35.23 E-value=1.2e+02 Score=32.54 Aligned_cols=128 Identities=17% Similarity=0.066 Sum_probs=72.7
Q ss_pred HHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhh
Q 008172 354 EIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSR 433 (575)
Q Consensus 354 k~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 433 (575)
.-+...|+..|.++.+. .|..+....+...-..|++.+...++.... .+..+++...+++++...++
T Consensus 126 ~a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~- 192 (527)
T 3pc3_A 126 IGLAMACAVKGYKCIIV-----------MPEKMSNEKVSALRTLGAKIIRTPTEAAYD-SPEGLIYVAQQLQRETPNSI- 192 (527)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTTSCTT-STTSHHHHHHHHHHHSSSEE-
T ss_pred HHHHHHHHHhCCeEEEE-----------EcCCCCHHHHHHHHHCCCEEEEeCCCCCcc-cHHHHHHHHHHHHHhCCCcE-
Confidence 34566888999999874 233333344555667899988776542211 12234443333332221110
Q ss_pred hhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcC--CcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCcHH
Q 008172 434 EENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLG--VDAIFVYTKHGHMASLLSR----NRPNPPIFAFTNDDS 505 (575)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~~~ 505 (575)
...+.. .+.++..-....+.++..+++ .++||+.+-+|.|+--+++ ..|.+.|+++.|...
T Consensus 193 ---------~~~~~~--n~~n~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~ 259 (527)
T 3pc3_A 193 ---------VLDQYR--NAGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGS 259 (527)
T ss_dssp ---------CCCTTT--CTHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTC
T ss_pred ---------ecCCCC--CcchHHHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCc
Confidence 011111 111122223334567777764 6899999999998776655 479999999976543
No 314
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=35.20 E-value=92 Score=29.56 Aligned_cols=35 Identities=6% Similarity=0.009 Sum_probs=26.9
Q ss_pred HHHHHHHHcCCCEEEecC---cCChhhHHHHHHHHhccC
Q 008172 269 DDIEFGIAEGVDFIAMSF---VCDADSVRHLKKYVSGKS 304 (575)
Q Consensus 269 ~di~~al~~gvd~I~~Sf---V~sa~dv~~ir~~l~~~~ 304 (575)
+.++.+.+.|+|+|=+.. -.+. ++.++++.+++.|
T Consensus 27 ~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~g 64 (264)
T 1yx1_A 27 SFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQG 64 (264)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcC
Confidence 567888999999998752 2233 8899999998876
No 315
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=35.15 E-value=3.5e+02 Score=26.98 Aligned_cols=140 Identities=12% Similarity=0.096 Sum_probs=76.5
Q ss_pred HHHHHHHcCCCEEEe-cCcCC----h---hhHHHHHHHHhccCCCCceEEee-------ecC---H-HHHhc-HHHHHhc
Q 008172 270 DIEFGIAEGVDFIAM-SFVCD----A---DSVRHLKKYVSGKSSRSIKVLAK-------IEN---L-ESLQK-FEEIVEA 329 (575)
Q Consensus 270 di~~al~~gvd~I~~-SfV~s----a---~dv~~ir~~l~~~~~~~i~IIaK-------IEt---~-~av~n-ldeI~~~ 329 (575)
..+.+++.|+|+|-+ -|.++ . +.+.++.+.+.+.| +.++.- +.+ + +.+.. ..+..+.
T Consensus 113 ~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G---~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~l 189 (304)
T 1to3_A 113 NAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNG---LLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDS 189 (304)
T ss_dssp CHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTT---CEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTS
T ss_pred hHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcC---CcEEEEEECCCCccccCCChhHHHHHHHHHHHHc
Confidence 346688999999863 22332 2 34455555555444 333332 221 1 33333 2222222
Q ss_pred -CCEEEEeCC-CCCCCCCCCChHHHHHHHHHHHHH-cCCC-EEEehhhHHhhhcCCCCChhh-HhhHHHHHHcccceEEe
Q 008172 330 -SDGIMVARG-DLGVDIPLEQIPTVQEIIIHVCRQ-LNKP-VIVASQLLESMVEYPTPTRAE-VADVSEAVRQYADALML 404 (575)
Q Consensus 330 -sDgImIaRG-DLg~e~~~e~v~~~Qk~Ii~~c~~-~gKP-vivaTq~LeSM~~~p~PtrAE-v~Dv~nav~~G~D~vmL 404 (575)
+|.+=+..+ | + . .. +.-.+++++.... .+.| |+++.- ++..+ ...+..++..|++++..
T Consensus 190 GaD~iKv~~~~~-~--~--g~-~~~~~~vv~~~~~~~~~P~Vv~aGG----------~~~~~~~~~~~~a~~aGa~Gv~v 253 (304)
T 1to3_A 190 GADLYKVEMPLY-G--K--GA-RSDLLTASQRLNGHINMPWVILSSG----------VDEKLFPRAVRVAMEAGASGFLA 253 (304)
T ss_dssp SCSEEEECCGGG-G--C--SC-HHHHHHHHHHHHHTCCSCEEECCTT----------SCTTTHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEeCCCcC-C--C--CC-HHHHHHHHHhccccCCCCeEEEecC----------CCHHHHHHHHHHHHHcCCeEEEE
Confidence 687767653 2 1 1 11 2233344444333 5889 776543 23222 24466677889999999
Q ss_pred ccCcCCC----CCHHHHH--------HHHHHHHHHH
Q 008172 405 SGESAIG----PFGQKAV--------SVLQMASSRM 428 (575)
Q Consensus 405 s~ETa~G----~yPveaV--------~~m~~I~~~a 428 (575)
-.-+..- +.|.+++ +.++.++.+.
T Consensus 254 GRaI~q~~~~~~dp~~~~~~~~~~~~~~l~~iv~~~ 289 (304)
T 1to3_A 254 GRAVWSSVIGLPDTELMLRDVSAPKLQRLGEIVDEM 289 (304)
T ss_dssp SHHHHGGGTTCSCHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ehHHhCccccCCCHHHHHHhhchHHHHHHHHHHhcC
Confidence 7777666 8898888 7777776553
No 316
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=35.14 E-value=61 Score=33.20 Aligned_cols=62 Identities=8% Similarity=0.115 Sum_probs=41.5
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeC
Q 008172 90 KTKMVCTIGPACCSME----DLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDT 154 (575)
Q Consensus 90 ~tkIi~TiGPas~~~e----~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl 154 (575)
+....+|.|....+++ ..+++.++|.+.+.+++.|++.+.-.++++.+|++. |..+.|++|.
T Consensus 133 ~v~~y~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---G~d~~l~vDa 198 (371)
T 2ovl_A 133 VVPVYAGGIDLELPVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHL---GDSFPLMVDA 198 (371)
T ss_dssp EEEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHH---CTTSCEEEEC
T ss_pred CeeEEEeCCCcCCCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHh---CCCCeEEEEC
Confidence 3455566554222454 446778899999999999988877777777777653 3345556665
No 317
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=35.09 E-value=2.7e+02 Score=28.33 Aligned_cols=127 Identities=17% Similarity=0.167 Sum_probs=0.0
Q ss_pred HHHHHHHcCCCEEEec---CcCChhhHHHHHHH------HhccCCCCceEEeeec---------------CHHHHhcHHH
Q 008172 270 DIEFGIAEGVDFIAMS---FVCDADSVRHLKKY------VSGKSSRSIKVLAKIE---------------NLESLQKFEE 325 (575)
Q Consensus 270 di~~al~~gvd~I~~S---fV~sa~dv~~ir~~------l~~~~~~~i~IIaKIE---------------t~~av~nlde 325 (575)
+++.++++|+|.+.+- |..+..+.+.+.++ +.+.| +...+| +++.+...-.
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~G-----lP~~~ep~~y~r~gg~v~~~~dp~~Va~aaR 207 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQ-----LPIMLEPFMSNWVNGKVVNDLSTDAVIQSVA 207 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTT-----CCEEEEEEEEEEETTEEEECCSHHHHHHHHH
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcC-----CcEEEEeeccccCCCCcCCCCCHHHHHHHHH
Q ss_pred HHhcCCEEEEeCCCCCCC-------CCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCC--CChhhHhhHHHHHH
Q 008172 326 IVEASDGIMVARGDLGVD-------IPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPT--PTRAEVADVSEAVR 396 (575)
Q Consensus 326 I~~~sDgImIaRGDLg~e-------~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~--PtrAEv~Dv~nav~ 396 (575)
|.. +||.+ +++. .-.+++++.| ..||+++ --+. ..++=...+..++.
T Consensus 208 iAa----------ELGADs~~tivK~~y~---e~f~~Vv~a~---~vPVVia--------GG~k~~~~~e~L~~v~~A~~ 263 (307)
T 3fok_A 208 IAA----------GLGNDSSYTWMKLPVV---EEMERVMEST---TMPTLLL--------GGEGGNDPDATFASWEHALT 263 (307)
T ss_dssp HHH----------TCSSCCSSEEEEEECC---TTHHHHGGGC---SSCEEEE--------CCSCC--CHHHHHHHHHHTT
T ss_pred HHH----------HhCCCcCCCEEEeCCc---HHHHHHHHhC---CCCEEEe--------CCCCCCCHHHHHHHHHHHHH
Q ss_pred -cccceEEeccCcCC--CCCHHHHHHHHHHHH
Q 008172 397 -QYADALMLSGESAI--GPFGQKAVSVLQMAS 425 (575)
Q Consensus 397 -~G~D~vmLs~ETa~--G~yPveaV~~m~~I~ 425 (575)
.|+-++...-=... -..|...++.+..|+
T Consensus 264 ~aGa~Gv~vGRNIfQ~~~~dp~~~v~al~~iV 295 (307)
T 3fok_A 264 LPGVRGLTVGRTLLYPQDGDVAAAVDTAARLV 295 (307)
T ss_dssp STTEEEEEECTTTSSCSSSCHHHHHHHHHHHH
T ss_pred hCCCeEEeechhhccCCCCCHHHHHHHHHHHH
No 318
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=34.99 E-value=67 Score=27.81 Aligned_cols=44 Identities=18% Similarity=0.308 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------ChhHHHHHhccCCCCcEEEEcCc
Q 008172 459 ICNCAVDMANNLGVDAIFVYTK---------HGHMASLLSRNRPNPPIFAFTND 503 (575)
Q Consensus 459 ia~~av~~a~~~~AkaIVVfT~---------SG~TAr~VSr~RP~~PIiAvT~~ 503 (575)
.+...++.|.+.+++.||+-++ -|+++..+.+.-| |||+.+-+.
T Consensus 108 ~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~~-~pVlvv~~~ 160 (162)
T 1mjh_A 108 PHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSN-KPVLVVKRK 160 (162)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHCC-SCEEEECCC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhCC-CCEEEEeCC
Confidence 4555567888999999888876 3678899988865 999998543
No 319
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=34.81 E-value=2.6e+02 Score=28.59 Aligned_cols=120 Identities=13% Similarity=0.129 Sum_probs=68.8
Q ss_pred HHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhh
Q 008172 355 IIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSRE 434 (575)
Q Consensus 355 ~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 434 (575)
-+...|+..|.++.+- .|..+....+...-..|++.+...+ .| -++.+..+++.++.+.+
T Consensus 107 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~-----~~-~~a~~~a~~l~~~~~~~--- 166 (372)
T 1p5j_A 107 AAAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATCKVVGE-----LL-DEAFELAKALAKNNPGW--- 166 (372)
T ss_dssp HHHHHHHHHTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECCS-----CH-HHHHHHHHHHHHHSTTE---
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHhcCCEEEEECC-----CH-HHHHHHHHHHHHhcCCc---
Confidence 4567789999999874 2332223344555678998775432 33 34554444443221111
Q ss_pred hhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcC--CcEEEEEcCChhHHHHHhc----cC-CCCcEEEEcCcH
Q 008172 435 ENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLG--VDAIFVYTKHGHMASLLSR----NR-PNPPIFAFTNDD 504 (575)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--AkaIVVfT~SG~TAr~VSr----~R-P~~PIiAvT~~~ 504 (575)
+ ...+.. .+ .....-...+.++..+++ .+.||+.+-+|.|+--+++ +. |...||++.+..
T Consensus 167 ------~-~v~~~~--n~-~~~~G~~t~~~Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~ 233 (372)
T 1p5j_A 167 ------V-YIPPFD--DP-LIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFG 233 (372)
T ss_dssp ------E-ECCSSC--CH-HHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETT
T ss_pred ------E-EeCCCC--CH-HHHhhHHHHHHHHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 0 111111 01 112222334567777774 6899999999998766654 33 889999998753
No 320
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=34.58 E-value=76 Score=31.31 Aligned_cols=102 Identities=15% Similarity=0.134 Sum_probs=60.4
Q ss_pred cCHH-HHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeee---cC--------HHHHhcHHHHHhcCCEE
Q 008172 266 KDWD-DIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKI---EN--------LESLQKFEEIVEASDGI 333 (575)
Q Consensus 266 kD~~-di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKI---Et--------~~av~nldeI~~~sDgI 333 (575)
.|.+ .++.+.+.|++.++++-+ +.++...+.++.+..+ ++...+=| +- .+.++.+++.++..+.-
T Consensus 27 ~d~~~vl~~~~~~GV~~~v~~~~-~~~~~~~~~~la~~~~--~v~~~~GiHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 103 (301)
T 2xio_A 27 DDLQDVIGRAVEIGVKKFMITGG-NLQDSKDALHLAQTNG--MFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGK 103 (301)
T ss_dssp CCHHHHHHHHHHHTEEEEEECCC-SHHHHHHHHHHHTTCT--TEEEEECCCGGGTHHHHHHCHHHHHHHHHHHHHTCTTT
T ss_pred cCHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHHCC--CEEEEEEECcChhhhCcccccHHHHHHHHHHHhcCCCC
Confidence 3544 456778899999888754 6778888777665432 32222222 11 13345555555443223
Q ss_pred EEeCCCCCCCCCC-C-ChHHHHH----HHHHHHHHcCCCEEEe
Q 008172 334 MVARGDLGVDIPL-E-QIPTVQE----IIIHVCRQLNKPVIVA 370 (575)
Q Consensus 334 mIaRGDLg~e~~~-e-~v~~~Qk----~Ii~~c~~~gKPviva 370 (575)
.+|=|..|+++.. . .-...|+ ..++.|++.|+||++=
T Consensus 104 ~~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH 146 (301)
T 2xio_A 104 VVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLH 146 (301)
T ss_dssp EEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEE
T ss_pred eEEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 4444777777633 1 2235564 6678999999999973
No 321
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=34.35 E-value=35 Score=36.05 Aligned_cols=43 Identities=23% Similarity=0.336 Sum_probs=33.8
Q ss_pred EecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHH
Q 008172 95 CTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQ 139 (575)
Q Consensus 95 ~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~ 139 (575)
+.+|+.. .+.++.++++|++++=|+.+||..+...++++.+|+
T Consensus 139 ~~v~~~~--~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~ 181 (400)
T 3ffs_A 139 AAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 181 (400)
T ss_dssp EEECCC---CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHT
T ss_pred eecCCCH--HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHh
Confidence 3456543 899999999999999999999988766666666653
No 322
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=34.32 E-value=61 Score=34.06 Aligned_cols=66 Identities=11% Similarity=0.127 Sum_probs=42.0
Q ss_pred CCceEEEecCCCCCCHH----HHHHHHHcCCcEEEeeCCCCCH---HHHHHHHHHHHHHhhhcCCceEEEEeCC
Q 008172 89 RKTKMVCTIGPACCSME----DLEKLAMGGMNVARLNMCHNTR---EWHLDVIRKIKQLNHEKLFCISVMIDTE 155 (575)
Q Consensus 89 r~tkIi~TiGPas~~~e----~l~~li~~G~~v~RlN~SHg~~---e~~~~~i~~ir~~~~~~~~~i~Il~Dl~ 155 (575)
.+...-+|.+.. .++| ..+++.+.|.+.+.+.+.||.. .....-++.++.+.+..|..+.|++|..
T Consensus 166 ~~v~~y~s~~~~-~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN 238 (412)
T 3stp_A 166 DRIPVYYSKLYA-GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECY 238 (412)
T ss_dssp SSEEEEEECCCS-CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred ceEEEEEEecCC-CCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 355666775332 2454 4466778899999999999732 2334455566666666666677777753
No 323
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=34.31 E-value=2.2e+02 Score=25.67 Aligned_cols=125 Identities=14% Similarity=0.119 Sum_probs=67.2
Q ss_pred HHHHHHHHHcCCCEEEecC--cCChhhHHHHHHHHhccCCCCceEEeeecC-------------------HHHHhcHHHH
Q 008172 268 WDDIEFGIAEGVDFIAMSF--VCDADSVRHLKKYVSGKSSRSIKVLAKIEN-------------------LESLQKFEEI 326 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~Sf--V~sa~dv~~ir~~l~~~~~~~i~IIaKIEt-------------------~~av~nldeI 326 (575)
.+++..+++.|++.+...- ++..+-+..+.+.++... ++..++. ....+-+..+
T Consensus 65 ~~~~~~~~~~Ga~~~l~kp~~~~~~~l~~~i~~~~~~~~-----~~~~~d~~~~~~~~~v~~~~g~~~~~~~~~~~i~~~ 139 (237)
T 3cwo_X 65 QAMVIEAIKAGAKDFIVNTAAVENPSLITQIAQTFGSQA-----VVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEV 139 (237)
T ss_dssp HHHHHHHHHTTCCEEEESHHHHHCTHHHHHHHHHHTGGG-----EEEEEEEEESSSCEEEEETTTTEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHCCHHheEeCCcccChHHHHHHHHHHhCCCc-----eEEEeeecccCCcEEEEEeCCccccccCHHHHHHHH
Confidence 6778889999999987653 456666667776664221 1111111 1233344555
Q ss_pred Hhc-CC-EEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEe
Q 008172 327 VEA-SD-GIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALML 404 (575)
Q Consensus 327 ~~~-sD-gImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmL 404 (575)
... +. .++.+.+.-|.--++. -+.|-+.+.....|+|..+- .-+ ..|+..+...|+|+++.
T Consensus 140 ~~~~~~~vli~~~~~~g~~~g~~-----~~~i~~~~~~~~~Pvia~~g---------~~~---~~~~~~~~~~G~~~~~v 202 (237)
T 3cwo_X 140 EKRGAGEILLTSIDRDGTKSGYD-----TEMIRFVRPLTTLPIIASGG---------AGK---MEHFLEAFLAGADAALA 202 (237)
T ss_dssp HHHTCSEEEEEETTTTTCCSCCC-----HHHHHHHGGGCCSCEEEESC---------CCS---HHHHHHHHHHTCSEEEE
T ss_pred hhcCCCeEEEEecCCCCcccccc-----HHHHHHHHHhcCCCEEecCC---------CCC---HHHHHHHHHcCcHHHhh
Confidence 544 33 4444544333333332 22333344556899997542 222 33555666789999987
Q ss_pred ccCcCCCCCH
Q 008172 405 SGESAIGPFG 414 (575)
Q Consensus 405 s~ETa~G~yP 414 (575)
..---.|.+.
T Consensus 203 g~a~~~~~~~ 212 (237)
T 3cwo_X 203 ASVFHFREID 212 (237)
T ss_dssp SHHHHTTSSC
T ss_pred hHHHHcCCCC
Confidence 6433234443
No 324
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=34.26 E-value=58 Score=31.80 Aligned_cols=53 Identities=15% Similarity=0.152 Sum_probs=33.8
Q ss_pred CCHHHHHHHH-HcCCcEEEeeCCCC---------CHHHHHHHHHHHHHHhhhcCCceEEEEeCCC
Q 008172 102 CSMEDLEKLA-MGGMNVARLNMCHN---------TREWHLDVIRKIKQLNHEKLFCISVMIDTEG 156 (575)
Q Consensus 102 ~~~e~l~~li-~~G~~v~RlN~SHg---------~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~G 156 (575)
-+.+.++.|. +.|+|++|+-++.. +++...+.++.+=+.+.+.| +.+++|+-+
T Consensus 39 ~~~~di~~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~G--i~vild~h~ 101 (293)
T 1tvn_A 39 YTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAED--MYVIIDFHS 101 (293)
T ss_dssp CSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTT--CEEEEEEEC
T ss_pred CCHHHHHHHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHCC--CEEEEEcCC
Confidence 4688999999 49999999987652 22333444444444455555 456677643
No 325
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=34.23 E-value=49 Score=32.95 Aligned_cols=63 Identities=17% Similarity=0.292 Sum_probs=39.3
Q ss_pred cCHHHHHHHHHcCCCEEEec------CcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc----CCEEEE
Q 008172 266 KDWDDIEFGIAEGVDFIAMS------FVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA----SDGIMV 335 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~S------fV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~----sDgImI 335 (575)
.|.+.+++|++.|++.|.+. |--+ +....++..... ++..+|+ |+ |+.+-+++... +||++|
T Consensus 161 h~~~El~rAl~~~a~iIGINNRnL~tf~vd---l~~t~~L~~~ip-~~~~~Vs--ES--GI~t~~dv~~l~~~G~~a~LV 232 (258)
T 4a29_A 161 NDENDLDIALRIGARFIGIMSRDFETGEIN---KENQRKLISMIP-SNVVKVA--KL--GISERNEIEELRKLGVNAFLI 232 (258)
T ss_dssp SSHHHHHHHHHTTCSEEEECSBCTTTCCBC---HHHHHHHHTTSC-TTSEEEE--EE--SSCCHHHHHHHHHTTCCEEEE
T ss_pred chHHHHHHHhcCCCcEEEEeCCCccccccC---HHHHHHHHhhCC-CCCEEEE--cC--CCCCHHHHHHHHHCCCCEEEE
Confidence 57888999999999999885 3333 333333333322 4455555 22 55555555444 799999
Q ss_pred e
Q 008172 336 A 336 (575)
Q Consensus 336 a 336 (575)
|
T Consensus 233 G 233 (258)
T 4a29_A 233 S 233 (258)
T ss_dssp C
T ss_pred C
Confidence 7
No 326
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=34.16 E-value=1e+02 Score=31.81 Aligned_cols=95 Identities=16% Similarity=0.215 Sum_probs=51.0
Q ss_pred ChhhHHHHHHHHhccCCCCceEEee-ecCHHHHhcHHHHHhc-CCEEEEeC-CCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 008172 289 DADSVRHLKKYVSGKSSRSIKVLAK-IENLESLQKFEEIVEA-SDGIMVAR-GDLGVDIPLEQIPTVQEIIIHVCRQLNK 365 (575)
Q Consensus 289 sa~dv~~ir~~l~~~~~~~i~IIaK-IEt~~av~nldeI~~~-sDgImIaR-GDLg~e~~~e~v~~~Qk~Ii~~c~~~gK 365 (575)
+.++++.+|+.. +..++.| +-++ +......+. +|+|.|.= |-=....+...+ ..-.++.+++. ...
T Consensus 217 ~~~~i~~lr~~~------~~PvivK~v~~~---e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~-~~l~~v~~~v~-~~i 285 (368)
T 2nli_A 217 SPRDIEEIAGHS------GLPVFVKGIQHP---EDADMAIKRGASGIWVSNHGARQLYEAPGSF-DTLPAIAERVN-KRV 285 (368)
T ss_dssp CHHHHHHHHHHS------SSCEEEEEECSH---HHHHHHHHTTCSEEEECCGGGTSCSSCCCHH-HHHHHHHHHHT-TSS
T ss_pred hHHHHHHHHHHc------CCCEEEEcCCCH---HHHHHHHHcCCCEEEEcCCCcCCCCCCCChH-HHHHHHHHHhC-CCC
Confidence 456677776644 2457777 3232 223333334 89999941 110011222222 22222222221 258
Q ss_pred CEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEecc
Q 008172 366 PVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 366 PvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ 406 (575)
|||...-+- --.|+..++..|+|+||+..
T Consensus 286 pVia~GGI~------------~g~D~~kalalGAd~V~iGr 314 (368)
T 2nli_A 286 PIVFDSGVR------------RGEHVAKALASGADVVALGR 314 (368)
T ss_dssp CEEECSSCC------------SHHHHHHHHHTTCSEEEECH
T ss_pred eEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 999864332 34688999999999999973
No 327
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=34.09 E-value=16 Score=31.43 Aligned_cols=62 Identities=10% Similarity=0.066 Sum_probs=45.0
Q ss_pred hHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEE
Q 008172 292 SVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIV 369 (575)
Q Consensus 292 dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviv 369 (575)
=+..++++..++| -++.+.|. +...+++.+.-.|.+++| |.+....+++-+.|...|+||.+
T Consensus 22 lv~km~~~a~~~g-i~v~i~a~-----~~~~~~~~~~~~DvvLLg----------PQV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 22 LANAINEGANLTE-VRVIANSG-----AYGAHYDIMGVYDLIILA----------PQVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp HHHHHHHHHHHHT-CSEEEEEE-----ETTSCTTTGGGCSEEEEC----------GGGGGGHHHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHHCC-CceEEEEc-----chHHHHhhccCCCEEEEC----------hHHHHHHHHHHHHhhhcCCcEEE
Confidence 4566777777776 45666652 333466667779999998 56666678888889899999997
No 328
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=34.08 E-value=1.3e+02 Score=28.48 Aligned_cols=39 Identities=5% Similarity=0.112 Sum_probs=30.0
Q ss_pred ccCH-HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccC
Q 008172 265 KKDW-DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKS 304 (575)
Q Consensus 265 ekD~-~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~ 304 (575)
+.+. +.++.+.+.|+|+|=+.+- ...+++++++.+++.|
T Consensus 22 ~~~~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~g 61 (269)
T 3ngf_A 22 EVPFLERFRLAAEAGFGGVEFLFP-YDFDADVIARELKQHN 61 (269)
T ss_dssp TSCHHHHHHHHHHTTCSEEECSCC-TTSCHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHcCCCEEEecCC-ccCCHHHHHHHHHHcC
Confidence 3444 5677888999999988763 4567899999998776
No 329
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=34.08 E-value=45 Score=33.33 Aligned_cols=139 Identities=17% Similarity=0.140 Sum_probs=70.2
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCC----
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVD---- 343 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e---- 343 (575)
...++.+.+.|+|+|..+-.-+++++.++.+ .... .+.++.-..+.+-. ...+-.-+|.|.+. |..|..
T Consensus 90 ~~~~~~~~a~GAd~V~~~~~l~~~~~~~~i~-~~~~---g~~v~~~~~~~~e~--~~a~~~Gad~V~~~-G~~g~g~~~~ 162 (305)
T 2nv1_A 90 IVEARVLEAMGVDYIDESEVLTPADEEFHLN-KNEY---TVPFVCGCRDLGEA--TRRIAEGASMLRTK-GEPGTGNIVE 162 (305)
T ss_dssp HHHHHHHHHHTCSEEEECTTSCCSCSSCCCC-GGGC---SSCEEEEESSHHHH--HHHHHTTCSEEEEC-CCTTSCCTHH
T ss_pred hHHHHHHHHCCCCEEEEeccCCHHHHHHHHH-Hhcc---CCcEEEEeCCHHHH--HHHHHCCCCEEEec-cccCccchHH
Confidence 4556777889999997443334444332221 1112 24566666554321 11222237888874 543321
Q ss_pred -----------------CCCCChHHHH------HHHHHHHH-HcCCCEE--EehhhHHhhhcCCCCChhhHhhHHHHHHc
Q 008172 344 -----------------IPLEQIPTVQ------EIIIHVCR-QLNKPVI--VASQLLESMVEYPTPTRAEVADVSEAVRQ 397 (575)
Q Consensus 344 -----------------~~~e~v~~~Q------k~Ii~~c~-~~gKPvi--vaTq~LeSM~~~p~PtrAEv~Dv~nav~~ 397 (575)
+..+.+...+ -..++... ....|++ ... ..-|.+ |+..+...
T Consensus 163 ~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~~iPvi~~a~G---------GI~~~~---d~~~~~~~ 230 (305)
T 2nv1_A 163 AVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAG---------GVATPA---DAALMMQL 230 (305)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHTSCSSCEEBCS---------CCCSHH---HHHHHHHT
T ss_pred HHhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHhcCCCEEEEecc---------CCCCHH---HHHHHHHc
Confidence 0011111100 12333333 3467887 322 222443 55666678
Q ss_pred ccceEEeccCcCCCCCHHHHHHHHHHHH
Q 008172 398 YADALMLSGESAIGPFGQKAVSVLQMAS 425 (575)
Q Consensus 398 G~D~vmLs~ETa~G~yPveaV~~m~~I~ 425 (575)
|+|++++..--.....|.++++.+.+.+
T Consensus 231 GadgV~vGsai~~~~~p~~~~~~l~~~~ 258 (305)
T 2nv1_A 231 GADGVFVGSGIFKSDNPAKFAKAIVEAT 258 (305)
T ss_dssp TCSCEEECGGGGGSSCHHHHHHHHHHHH
T ss_pred CCCEEEEcHHHHcCCCHHHHHHHHHHHH
Confidence 9999999855444456877766655543
No 330
>1vhy_A Hypothetical protein HI0303; PSI, protein structure initiative, NEW YORK SGX research CEN structural genomics, nysgxrc; HET: MSE; 1.90A {Haemophilus influenzae} SCOP: b.122.1.2 c.116.1.5 PDB: 1nxz_A
Probab=33.97 E-value=1.5e+02 Score=29.12 Aligned_cols=72 Identities=14% Similarity=0.200 Sum_probs=41.9
Q ss_pred cCCCCEEEEeCC---eeEEEEEEEECCeEEEEEecCeEecCCcccccccCcccccccccCCCCCccCHHHHHHHHHcCCC
Q 008172 204 IEVGDELVIDGG---MASFEVIEKVGNDLRCKCTDPGVFLPRAKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVD 280 (575)
Q Consensus 204 v~~Gd~IliDDG---~i~l~V~~~~~~~i~~~V~~gG~l~s~K~vn~~r~g~~~~~~~~lp~lsekD~~di~~al~~gvd 280 (575)
+++||.|.+-|| ....+|.+++.+.+.+++..--.........+ ..-+.+|. .++--..+..|.+.||+
T Consensus 36 l~~Gd~v~l~dg~g~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~l-------~L~~al~K-~~r~e~ilqkatELGv~ 107 (257)
T 1vhy_A 36 MTEGEQLELFDGSNHIYPAKIIESNKKSVKVEILGRELADKESHLKI-------HLGQVISR-GERMEFTIQKSVELGVN 107 (257)
T ss_dssp CCTTCEEEEECSSSEEEEEEEEEECSSCEEEEECCCEECCCCCSSCE-------EEEEEC-----CCHHHHHHHHHTTCC
T ss_pred cCCCCEEEEEcCCCCEEEEEEEEeeCCeEEEEEEEEecccCCCCceE-------EEEEecCc-hHHHHHHHHHHHhhCcC
Confidence 467999998665 35667888888888777764322111111110 11223444 35556678899999999
Q ss_pred EEE
Q 008172 281 FIA 283 (575)
Q Consensus 281 ~I~ 283 (575)
-|.
T Consensus 108 ~I~ 110 (257)
T 1vhy_A 108 VIT 110 (257)
T ss_dssp EEE
T ss_pred EEE
Confidence 753
No 331
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=33.96 E-value=3.7e+02 Score=26.88 Aligned_cols=115 Identities=12% Similarity=0.225 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCEEEe---------------cCcCChhhHHHHHHHHhccCCCCceEEeeecC------HHHHhcHHHH
Q 008172 268 WDDIEFGIAEGVDFIAM---------------SFVCDADSVRHLKKYVSGKSSRSIKVLAKIEN------LESLQKFEEI 326 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~---------------SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt------~~av~nldeI 326 (575)
.+.++..++.|+++|-+ ..+...+-+..++.....+......|+++.|. .++++.....
T Consensus 97 ~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~ay 176 (295)
T 1xg4_A 97 ARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAY 176 (295)
T ss_dssp HHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHHH
Q ss_pred Hhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhh---cCCCCChhhHhhHHHHHHcccceE
Q 008172 327 VEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMV---EYPTPTRAEVADVSEAVRQYADAL 402 (575)
Q Consensus 327 ~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~---~~p~PtrAEv~Dv~nav~~G~D~v 402 (575)
.+. +|+||+- +.+. -+.+-+.|.+..+|+++ .|. ..|.++.+|+. ..|++.+
T Consensus 177 ~eAGAd~i~~e--------~~~~----~~~~~~i~~~~~iP~~~------N~~~~g~~p~~~~~eL~------~~G~~~v 232 (295)
T 1xg4_A 177 VEAGAEMLFPE--------AITE----LAMYRQFADAVQVPILA------NITEFGATPLFTTDELR------SAHVAMA 232 (295)
T ss_dssp HHTTCSEEEET--------TCCS----HHHHHHHHHHHCSCBEE------ECCSSSSSCCCCHHHHH------HTTCSEE
T ss_pred HHcCCCEEEEe--------CCCC----HHHHHHHHHHcCCCEEE------EecccCCCCCCCHHHHH------HcCCCEE
Q ss_pred Eecc
Q 008172 403 MLSG 406 (575)
Q Consensus 403 mLs~ 406 (575)
+...
T Consensus 233 ~~~~ 236 (295)
T 1xg4_A 233 LYPL 236 (295)
T ss_dssp EESS
T ss_pred EECh
No 332
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=33.88 E-value=74 Score=25.96 Aligned_cols=76 Identities=14% Similarity=0.256 Sum_probs=44.6
Q ss_pred HHHHHHhcCCcEEEEEcC----Chh-HHHHHhccCCCCcEEEEcCcHHHHH-HhcccCCcEEEEecCCCCHHHHHHHHHH
Q 008172 463 AVDMANNLGVDAIFVYTK----HGH-MASLLSRNRPNPPIFAFTNDDSTRM-ALNLQWGVIPVLVNLSDDMETNIAKTID 536 (575)
Q Consensus 463 av~~a~~~~AkaIVVfT~----SG~-TAr~VSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~Pvl~~~~~d~d~~i~~al~ 536 (575)
|.+...+...++|++-.. +|. ..+.+.+..|.+||+++|....... .-.+..|+.-++.++..+.+. +..++.
T Consensus 43 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~~-l~~~i~ 121 (130)
T 3eod_A 43 ALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNR-LREMVF 121 (130)
T ss_dssp HHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEEESCC---CH-HHHHHH
T ss_pred HHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCcHHH-HHHHHH
Confidence 444455666786666432 332 5566777789999999997654432 223567888888876633333 344444
Q ss_pred HHH
Q 008172 537 LIK 539 (575)
Q Consensus 537 ~~~ 539 (575)
.+.
T Consensus 122 ~~l 124 (130)
T 3eod_A 122 ACL 124 (130)
T ss_dssp HHH
T ss_pred HHh
Confidence 444
No 333
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=33.83 E-value=91 Score=32.41 Aligned_cols=95 Identities=18% Similarity=0.207 Sum_probs=54.7
Q ss_pred HHHHHHHHcCCCEEEecC------cCChhhHHHH-HHHHhccCCCCceEEeee---cCHHHHhcHHHHHhc-CCEEEEeC
Q 008172 269 DDIEFGIAEGVDFIAMSF------VCDADSVRHL-KKYVSGKSSRSIKVLAKI---ENLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 269 ~di~~al~~gvd~I~~Sf------V~sa~dv~~i-r~~l~~~~~~~i~IIaKI---Et~~av~nldeI~~~-sDgImIaR 337 (575)
+.++|.++.|+|+|++.= -=|.++=.++ +..++..+ .++.||+-+ -+.++++....-.+. +|++|+-+
T Consensus 84 ~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~ 162 (360)
T 4dpp_A 84 DLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFG-GSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 162 (360)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 455788899999998732 2233333333 33344343 468888877 356666666665555 89999975
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-...- .+.+.+...-+.|.+ + .|+++-
T Consensus 163 PyY~k-~sq~gl~~hf~~IA~----a-~PiilY 189 (360)
T 4dpp_A 163 PYYGK-TSIEGLIAHFQSVLH----M-GPTIIY 189 (360)
T ss_dssp CCSSC-CCHHHHHHHHHTTGG----G-SCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHHHH----h-CCEEEE
Confidence 43321 122333333444433 1 598875
No 334
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=33.73 E-value=1.3e+02 Score=30.77 Aligned_cols=61 Identities=11% Similarity=0.033 Sum_probs=40.9
Q ss_pred CCceEEEecCCCCCCHH----HHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeC
Q 008172 89 RKTKMVCTIGPACCSME----DLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDT 154 (575)
Q Consensus 89 r~tkIi~TiGPas~~~e----~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl 154 (575)
.+....+|+|- .++| ..+++.++|.+.+.+++.|++.+.-.++++.+|++ .|..+.+++|.
T Consensus 133 ~~v~~~~~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g~~~~l~vDa 197 (378)
T 2qdd_A 133 TPVPINSSIST--GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAG---LPDGHRVTFDV 197 (378)
T ss_dssp CCEEBEEEECS--CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHS---CCTTCEEEEEC
T ss_pred CCCceEEEecC--CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHH---hCCCCEEEEeC
Confidence 34566678864 3444 35667889999999999998776666666666653 34344556654
No 335
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=33.72 E-value=56 Score=33.91 Aligned_cols=66 Identities=18% Similarity=0.216 Sum_probs=37.3
Q ss_pred CHHHHHHHHHcCCCEEEecCcC---------ChhhHHHHHHHHhccCCCCceEEe--eecCHHHHhcHHHHHhcCCEEEE
Q 008172 267 DWDDIEFGIAEGVDFIAMSFVC---------DADSVRHLKKYVSGKSSRSIKVLA--KIENLESLQKFEEIVEASDGIMV 335 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~SfV~---------sa~dv~~ir~~l~~~~~~~i~IIa--KIEt~~av~nldeI~~~sDgImI 335 (575)
..++.+.+.+.|+|+|.+|.-- +.+-+.++++.+ + +++.||+ -|-+. -+-+..+..=+|++||
T Consensus 227 ~~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av---~-~~ipVia~GGI~~g--~Dv~kaLalGA~aV~i 300 (352)
T 3sgz_A 227 TKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAV---K-GKIEVYMDGGVRTG--TDVLKALALGARCIFL 300 (352)
T ss_dssp SHHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHH---T-TSSEEEEESSCCSH--HHHHHHHHTTCSEEEE
T ss_pred cHHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHh---C-CCCeEEEECCCCCH--HHHHHHHHcCCCEEEE
Confidence 3677889999999999996521 112233344433 2 3456665 34332 2223333333888888
Q ss_pred eCC
Q 008172 336 ARG 338 (575)
Q Consensus 336 aRG 338 (575)
||.
T Consensus 301 Gr~ 303 (352)
T 3sgz_A 301 GRP 303 (352)
T ss_dssp SHH
T ss_pred CHH
Confidence 863
No 336
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=33.62 E-value=3.6e+02 Score=29.50 Aligned_cols=152 Identities=13% Similarity=0.017 Sum_probs=93.1
Q ss_pred CCCccCHHHHH-HHHHcCCCEEEecC----cC-----ChhhHHHHHHHHhccCCCCceEEeeec--CHHHH---------
Q 008172 262 TLSKKDWDDIE-FGIAEGVDFIAMSF----VC-----DADSVRHLKKYVSGKSSRSIKVLAKIE--NLESL--------- 320 (575)
Q Consensus 262 ~lsekD~~di~-~al~~gvd~I~~Sf----V~-----sa~dv~~ir~~l~~~~~~~i~IIaKIE--t~~av--------- 320 (575)
+++..|+..|- ...+.|++.|=+.| +. ++++.+.++.+.+.. .++.+.+-+= |.-|.
T Consensus 43 ~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~--~~~~l~~L~R~~N~~G~~~ypddv~~ 120 (539)
T 1rqb_A 43 RMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLM--PNSRLQMLLRGQNLLGYRHYNDEVVD 120 (539)
T ss_dssp CCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHC--TTSCEEEEECGGGTTSSSCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhC--CCCEEEEEeccccccCcccCcccccH
Confidence 56667765554 45568999998753 22 556655565544322 3444544441 11121
Q ss_pred hcHHHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcc
Q 008172 321 QKFEEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQY 398 (575)
Q Consensus 321 ~nldeI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G 398 (575)
.+++..++. .|.|-|- ....++ .-.+..++.++++|+.+-++= |+...+.-+...+.+++. +...|
T Consensus 121 ~~ve~a~~aGvd~vrIf-------~s~sd~-~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~G 188 (539)
T 1rqb_A 121 RFVDKSAENGMDVFRVF-------DAMNDP-RNMAHAMAAVKKAGKHAQGTI----CYTISPVHTVEGYVKLAGQLLDMG 188 (539)
T ss_dssp HHHHHHHHTTCCEEEEC-------CTTCCT-HHHHHHHHHHHHTTCEEEEEE----ECCCSTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCEEEEE-------EehhHH-HHHHHHHHHHHHCCCeEEEEE----EeeeCCCCCHHHHHHHHHHHHHcC
Confidence 234555555 6766653 222333 335788999999999883211 223444456677777777 56679
Q ss_pred cceEEeccCcCCCCCHHHHHHHHHHHHHHH
Q 008172 399 ADALMLSGESAIGPFGQKAVSVLQMASSRM 428 (575)
Q Consensus 399 ~D~vmLs~ETa~G~yPveaV~~m~~I~~~a 428 (575)
+|.|.|. +|+=+-.|-++-+++..+.++.
T Consensus 189 ad~I~L~-DT~G~~~P~~v~~lv~~l~~~~ 217 (539)
T 1rqb_A 189 ADSIALK-DMAALLKPQPAYDIIKAIKDTY 217 (539)
T ss_dssp CSEEEEE-ETTCCCCHHHHHHHHHHHHHHH
T ss_pred CCEEEeC-CCCCCcCHHHHHHHHHHHHHhc
Confidence 9999997 8888888998888777765443
No 337
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=33.49 E-value=48 Score=32.87 Aligned_cols=68 Identities=19% Similarity=0.134 Sum_probs=43.2
Q ss_pred HHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecC-------HHHHhcHHHHHhc-CCEEEEeCCCCCC
Q 008172 271 IEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIEN-------LESLQKFEEIVEA-SDGIMVARGDLGV 342 (575)
Q Consensus 271 i~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt-------~~av~nldeI~~~-sDgImIaRGDLg~ 342 (575)
.+.+.+.|+|++++| ++++..+|+.++. +-+.+..=|-- +.=+.++.+.++. +|.+.+||+=+..
T Consensus 150 A~~a~~~G~dGvV~s----~~e~~~ir~~~~~---~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a 222 (259)
T 3tfx_A 150 AKMAKHSGADGVICS----PLEVKKLHENIGD---DFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLA 222 (259)
T ss_dssp HHHHHHTTCCEEECC----GGGHHHHHHHHCS---SSEEEECCCCCC-----------CHHHHHHTTCSEEEECHHHHTS
T ss_pred HHHHHHhCCCEEEEC----HHHHHHHHhhcCC---ccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCC
Confidence 345677899999886 8899999998742 11223344421 1113357777777 9999999976655
Q ss_pred CCC
Q 008172 343 DIP 345 (575)
Q Consensus 343 e~~ 345 (575)
+=|
T Consensus 223 ~dp 225 (259)
T 3tfx_A 223 SDP 225 (259)
T ss_dssp SSH
T ss_pred CCH
Confidence 433
No 338
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=33.48 E-value=96 Score=32.13 Aligned_cols=31 Identities=19% Similarity=0.153 Sum_probs=24.3
Q ss_pred CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEecc
Q 008172 364 NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 364 gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ 406 (575)
..|||...-+- --.|+..++..|||+||+..
T Consensus 272 ~ipVia~GGI~------------~g~Dv~kaLalGA~aV~iGr 302 (352)
T 3sgz_A 272 KIEVYMDGGVR------------TGTDVLKALALGARCIFLGR 302 (352)
T ss_dssp SSEEEEESSCC------------SHHHHHHHHHTTCSEEEESH
T ss_pred CCeEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 57998865443 34689999999999999963
No 339
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=33.33 E-value=1.2e+02 Score=30.42 Aligned_cols=52 Identities=12% Similarity=0.151 Sum_probs=39.6
Q ss_pred HHHHHHHHcCCcEEEeeC-CC--CC-----HHHHHHHHHHHHHHhhhcCCceEEEEeCCCCe
Q 008172 105 EDLEKLAMGGMNVARLNM-CH--NT-----REWHLDVIRKIKQLNHEKLFCISVMIDTEGSQ 158 (575)
Q Consensus 105 e~l~~li~~G~~v~RlN~-SH--g~-----~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~Gpk 158 (575)
+..++|+++|+++.=+|. |- |. .|+...++..++.+.++.+ +.|.+|+..|+
T Consensus 42 ~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~--~piSIDT~~~~ 101 (282)
T 1aj0_A 42 KHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFE--VWISVDTSKPE 101 (282)
T ss_dssp HHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCC--CEEEEECCCHH
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcC--CeEEEeCCCHH
Confidence 456899999999999998 53 21 5788888888888877654 45667886655
No 340
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=33.31 E-value=1.9e+02 Score=26.97 Aligned_cols=35 Identities=14% Similarity=0.177 Sum_probs=27.8
Q ss_pred HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccC
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKS 304 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~ 304 (575)
+.++++.+.|+|+|=+.+- ...++.++++.+++.|
T Consensus 19 ~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~g 53 (260)
T 1k77_A 19 ERFAAARKAGFDAVEFLFP-YNYSTLQIQKQLEQNH 53 (260)
T ss_dssp GHHHHHHHHTCSEEECSCC-TTSCHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCEEEecCC-CCCCHHHHHHHHHHcC
Confidence 5678888999999988763 4557888999888776
No 341
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=33.17 E-value=2.9e+02 Score=25.76 Aligned_cols=127 Identities=13% Similarity=0.142 Sum_probs=75.8
Q ss_pred HHHHHHHHHcCCCEEEecCcC-ChhhHHHHHHHHhccCCCCceEEe---eec------CHHHHhcHHHHHhc-----CCE
Q 008172 268 WDDIEFGIAEGVDFIAMSFVC-DADSVRHLKKYVSGKSSRSIKVLA---KIE------NLESLQKFEEIVEA-----SDG 332 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~-sa~dv~~ir~~l~~~~~~~i~IIa---KIE------t~~av~nldeI~~~-----sDg 332 (575)
.+.++.+.+.|+|+|=+..-. +..++.++++.+.+.|. .+..+. .+- ..++++.+...++. ++.
T Consensus 21 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl-~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~ 99 (275)
T 3qc0_A 21 AEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGL-KLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADC 99 (275)
T ss_dssp HHHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTC-EESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCC-ceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 356788899999999886521 45678899999988763 221111 121 12455666666655 688
Q ss_pred EEEeCCCCCCC-CC----CCChHHHHHHHHHHHHHcCCCEEEehhhHHhh---hcCCCCChhhHhhHHHHHHc
Q 008172 333 IMVARGDLGVD-IP----LEQIPTVQEIIIHVCRQLNKPVIVASQLLESM---VEYPTPTRAEVADVSEAVRQ 397 (575)
Q Consensus 333 ImIaRGDLg~e-~~----~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM---~~~p~PtrAEv~Dv~nav~~ 397 (575)
+.+..|...-. .+ .+.+...-+++.+.|.++|..+.+=+ +..+ ..+...|.+++.++...+-.
T Consensus 100 v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~--~~~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (275)
T 3qc0_A 100 LVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEP--LHPMYAADRACVNTLGQALDICETLGP 170 (275)
T ss_dssp EEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECC--CCGGGTTTTBSCCCHHHHHHHHHHHCT
T ss_pred EEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeE--CCCcccCCccccCCHHHHHHHHHHhCc
Confidence 88877654211 11 12344445677788888898777521 1111 12345677777777766543
No 342
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=33.04 E-value=1.6e+02 Score=26.32 Aligned_cols=60 Identities=7% Similarity=-0.039 Sum_probs=40.6
Q ss_pred EecCCEEEEEeecc--CCC--CCcEEEecccccc-cccCCCCEEEEe--CCe-eEEEEEEEECCeEEE
Q 008172 172 VEEDSIWLFTAIKF--EGS--RPFTVKANYAGFS-EGIEVGDELVID--GGM-ASFEVIEKVGNDLRC 231 (575)
Q Consensus 172 l~~G~~v~lt~~~~--~~~--~~~~i~v~~~~l~-~~v~~Gd~IliD--DG~-i~l~V~~~~~~~i~~ 231 (575)
.+.|++..++.... .+. ......++...|- ..+++|+.+.+. ||. +..+|.++.++.++.
T Consensus 57 m~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~v 124 (151)
T 2kr7_A 57 AQIGEWEEVVIAPEEAYGVYESSYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKDFSATHVMV 124 (151)
T ss_dssp CCBTCEEEEEECGGGTTCSSCSCEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEEECSSEEEE
T ss_pred CCCCCEEEEEEecHHHcCCCCcceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEE
Confidence 46889888876532 231 1244556666662 368899999996 575 677789988887653
No 343
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=32.88 E-value=1.3e+02 Score=29.56 Aligned_cols=138 Identities=20% Similarity=0.202 Sum_probs=72.6
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhh-HHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADS-VRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPL 346 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~d-v~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e~~~ 346 (575)
.+.++.+.+.|+|+|-.+|+.+..+ ++.+++ .+ ..+.+++.+.+++-... ..-.-+|.|-+- |.=+.. +.
T Consensus 90 ~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~----~~-~~i~l~~~v~~~~~~~~--a~~~Gad~I~v~-G~~~~g-~~ 160 (297)
T 2zbt_A 90 FVEAMILEAIGVDFIDESEVLTPADEEHHIDK----WK-FKVPFVCGARNLGEALR--RIAEGAAMIRTK-GEAGTG-NV 160 (297)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCG----GG-CSSCEEEEESSHHHHHH--HHHTTCSEEEEC-CCSSSC-CT
T ss_pred HHHHHHHHHCCCCEEeeeCCCChHHHHHHHHH----hC-CCceEEeecCCHHHHHH--HHHcCCCEEEEc-ccccCc-ch
Confidence 5677888999999997777654422 222222 11 24677777777654332 222227887553 321110 00
Q ss_pred ----------------------CCh-------HHHHHHHHHHHHHcCCCEE--EehhhHHhhhcCCCCChhhHhhHHHHH
Q 008172 347 ----------------------EQI-------PTVQEIIIHVCRQLNKPVI--VASQLLESMVEYPTPTRAEVADVSEAV 395 (575)
Q Consensus 347 ----------------------e~v-------~~~Qk~Ii~~c~~~gKPvi--vaTq~LeSM~~~p~PtrAEv~Dv~nav 395 (575)
... +...+.+-+.+...+.|++ +.. ..-+. .|+..+.
T Consensus 161 ~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a~G---------GI~~~---e~i~~~~ 228 (297)
T 2zbt_A 161 VEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAG---------GIATP---ADAALMM 228 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEBCS---------SCCSH---HHHHHHH
T ss_pred HHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEeeC---------CCCCH---HHHHHHH
Confidence 000 0001122222333466765 321 12233 4666777
Q ss_pred HcccceEEeccCcCCCCCHHHHHHHHHHHHH
Q 008172 396 RQYADALMLSGESAIGPFGQKAVSVLQMASS 426 (575)
Q Consensus 396 ~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 426 (575)
..|+|++++..--.....|.++++.+.+.+.
T Consensus 229 ~aGadgvvvGsai~~~~dp~~~~~~l~~~i~ 259 (297)
T 2zbt_A 229 HLGMDGVFVGSGIFKSGDPRKRARAIVRAVA 259 (297)
T ss_dssp HTTCSEEEECGGGGGSSCHHHHHHHHHHHHH
T ss_pred HcCCCEEEEchHHhCCCCHHHHHHHHHHHHH
Confidence 7899999987433223468888887766543
No 344
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=32.87 E-value=21 Score=34.36 Aligned_cols=35 Identities=9% Similarity=0.169 Sum_probs=25.7
Q ss_pred cCHHHHHHHHHcCCCEEEecC--cCChhhHHHHHHHH
Q 008172 266 KDWDDIEFGIAEGVDFIAMSF--VCDADSVRHLKKYV 300 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~Sf--V~sa~dv~~ir~~l 300 (575)
.+.++++.+++.|+|+|++.- ..+++-+.++.+.+
T Consensus 89 ~~~~~~~~~l~~Gad~V~ig~~~l~dp~~~~~~~~~~ 125 (247)
T 3tdn_A 89 GKMEHFLEAFLRGADKVSINTAAVENPSLITQIAQTF 125 (247)
T ss_dssp CSHHHHHHHHHTTCSEECCSHHHHHCTHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCeeehhhHHhhChHHHHHHHHHh
Confidence 367888888999999998764 35666666666655
No 345
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=32.78 E-value=85 Score=30.70 Aligned_cols=67 Identities=12% Similarity=0.261 Sum_probs=42.1
Q ss_pred cCHHHHHHHHHcCCCEEEecCc------CChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc---CCEEEEe
Q 008172 266 KDWDDIEFGIAEGVDFIAMSFV------CDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA---SDGIMVA 336 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~SfV------~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~---sDgImIa 336 (575)
.+.+.+..+++.|+|+|.+... -+.+...++.+.+...+ .++.+|| |+ |+.+.+++.++ +||++||
T Consensus 162 ~~~~E~~~a~~~gad~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~-~~~~vIA--eg--GI~s~~dv~~l~~Ga~gvlVG 236 (254)
T 1vc4_A 162 HTERELEIALEAGAEVLGINNRDLATLHINLETAPRLGRLARKRG-FGGVLVA--ES--GYSRKEELKALEGLFDAVLIG 236 (254)
T ss_dssp CSHHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHHHHHHHTT-CCSEEEE--ES--CCCSHHHHHTTTTTCSEEEEC
T ss_pred CCHHHHHHHHHcCCCEEEEccccCcCCCCCHHHHHHHHHhCcccc-CCCeEEE--Ec--CCCCHHHHHHHHcCCCEEEEe
Confidence 4566777899999999998543 33444455555553221 1356666 33 66666666555 7999997
Q ss_pred C
Q 008172 337 R 337 (575)
Q Consensus 337 R 337 (575)
.
T Consensus 237 s 237 (254)
T 1vc4_A 237 T 237 (254)
T ss_dssp H
T ss_pred H
Confidence 4
No 346
>3ddy_A Lumazine protein, LUMP; luminescent bacteria, lumazine PR riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi}
Probab=32.77 E-value=87 Score=29.54 Aligned_cols=55 Identities=13% Similarity=0.254 Sum_probs=41.1
Q ss_pred EEEeccc-ccccccCCCCEEEEeCCeeEEEEEEEECCeEEEEEecC-------eEecCCccccccc
Q 008172 192 TVKANYA-GFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDP-------GVFLPRAKLSFRR 249 (575)
Q Consensus 192 ~i~v~~~-~l~~~v~~Gd~IliDDG~i~l~V~~~~~~~i~~~V~~g-------G~l~s~K~vn~~r 249 (575)
++.+..+ .+.++++.||.|-+|. +.|.|.++.++.+.+-+ .- |.+.....||+.|
T Consensus 23 ~l~i~~~~~~~~~~~~GdSIAvnG--vCLTV~~~~~~~f~vdv-~ETl~~T~Lg~l~~G~~VNLEr 85 (186)
T 3ddy_A 23 RHGIAFPEGMFQLVDVDTVMLVNG--CSNTVVRILGDMVYFDI-DQALGTTTFDGLKEGDQVNLEI 85 (186)
T ss_dssp EEEEECCTTTGGGCCTTCEEEETT--EEEEEEEEETTEEEEEE-CTTTTTSSGGGCCTTCEEEEEC
T ss_pred EEEEEeChHHhccCCCCCeEEEee--EEEEEEEEcCCEEEEEh-HHhhhhCchhhcCCCCEEEECC
Confidence 4555543 4788999999999987 88999999999988887 32 5555555666654
No 347
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=32.69 E-value=1.4e+02 Score=28.73 Aligned_cols=103 Identities=11% Similarity=0.068 Sum_probs=55.2
Q ss_pred CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccC---cCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHh
Q 008172 364 NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGE---SAIGPFGQKAVSVLQMASSRMELWSREENRQSA 440 (575)
Q Consensus 364 gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~E---Ta~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~ 440 (575)
|.++.++|-+ +--....++...+.++..|+.+|||.|-+--- --.|+| -+..+-+..+.+.+..+.. +-
T Consensus 52 ~~~v~v~~vi--gFP~G~~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~-~~v~~ei~~v~~a~~~~~l-----kv 123 (220)
T 1ub3_A 52 HAPFRLVTVV--GFPLGYQEKEVKALEAALACARGADEVDMVLHLGRAKAGDL-DYLEAEVRAVREAVPQAVL-----KV 123 (220)
T ss_dssp TCSSEEEEEE--STTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCH-HHHHHHHHHHHHHSTTSEE-----EE
T ss_pred CCCceEEEEe--cCCCCCCchHHHHHHHHHHHHcCCCEEEecccchhhhCCCH-HHHHHHHHHHHHHHcCCCc-----eE
Confidence 4445555433 22223345556689999999999999855311 112444 3445555555555443210 00
Q ss_pred hhcccccCCCCCCchhhHHHHHHHHHHHhcCCcEEEEEcCChhH
Q 008172 441 LCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHM 484 (575)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~AkaIVVfT~SG~T 484 (575)
+ ++ . ....+.--..|+++|.+.+|+ +|=|.||++
T Consensus 124 I--le----t--~~l~~e~i~~a~~ia~eaGAD--fVKTsTGf~ 157 (220)
T 1ub3_A 124 I--LE----T--GYFSPEEIARLAEAAIRGGAD--FLKTSTGFG 157 (220)
T ss_dssp E--CC----G--GGSCHHHHHHHHHHHHHHTCS--EEECCCSSS
T ss_pred E--Ee----c--CCCCHHHHHHHHHHHHHhCCC--EEEeCCCCC
Confidence 0 00 0 001233355688999999999 566666654
No 348
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=32.46 E-value=1.5e+02 Score=29.16 Aligned_cols=124 Identities=15% Similarity=0.095 Sum_probs=66.9
Q ss_pred HHHHHHHHHcCCCEEEec--------------CcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCE
Q 008172 268 WDDIEFGIAEGVDFIAMS--------------FVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDG 332 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~S--------------fV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDg 332 (575)
.+.++...+.|+++|-+. ..++.+.++++++ .. ++.++.++-.. -.+.++...+. +|+
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~---~~---~~Pvi~~~~~~-~~~~~~~~~~aGad~ 103 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMA---AV---SIPVMAKVRIG-HFVEAMILEAIGVDF 103 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHT---TC---SSCEEEEEETT-CHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHH---hc---CCCeEEEeccC-CHHHHHHHHHCCCCE
Confidence 566677789999999652 1123444444432 21 34555543211 14555666566 899
Q ss_pred EEEeCCCCCCCCCCCChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCC
Q 008172 333 IMVARGDLGVDIPLEQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAI 410 (575)
Q Consensus 333 ImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~ 410 (575)
+ |.....+.+. +++.+++. +.++++-+ -+..| ...+...|+|.+...||...
T Consensus 104 v-----~~~~~~~~~~-------~~~~~~~~~~~i~l~~~v-----------~~~~~---~~~a~~~Gad~I~v~G~~~~ 157 (297)
T 2zbt_A 104 I-----DESEVLTPAD-------EEHHIDKWKFKVPFVCGA-----------RNLGE---ALRRIAEGAAMIRTKGEAGT 157 (297)
T ss_dssp E-----EEETTSCCSC-------SSCCCCGGGCSSCEEEEE-----------SSHHH---HHHHHHTTCSEEEECCCSSS
T ss_pred E-----eeeCCCChHH-------HHHHHHHhCCCceEEeec-----------CCHHH---HHHHHHcCCCEEEEcccccC
Confidence 9 2222122222 22223332 67776421 12223 34567899999999999888
Q ss_pred CCCHHHHHHHHHHHH
Q 008172 411 GPFGQKAVSVLQMAS 425 (575)
Q Consensus 411 G~yPveaV~~m~~I~ 425 (575)
| -+.++..-++++.
T Consensus 158 g-~~~e~~~~~~~~~ 171 (297)
T 2zbt_A 158 G-NVVEAVRHARTMW 171 (297)
T ss_dssp C-CTHHHHHHHHHHH
T ss_pred c-chHHHHhhHHHHH
Confidence 8 4456665554443
No 349
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=32.42 E-value=98 Score=31.40 Aligned_cols=94 Identities=7% Similarity=0.064 Sum_probs=53.9
Q ss_pred HHHHHHHcCCCEEEecCcCChh---------------hHHHHHHHH----hccCCCCceEEeeecCHHHHhcHH----HH
Q 008172 270 DIEFGIAEGVDFIAMSFVCDAD---------------SVRHLKKYV----SGKSSRSIKVLAKIENLESLQKFE----EI 326 (575)
Q Consensus 270 di~~al~~gvd~I~~SfV~sa~---------------dv~~ir~~l----~~~~~~~i~IIaKIEt~~av~nld----eI 326 (575)
.++.+++.|+|+|.+=.|.+-+ +...+...| ..++ ....|+.| .|.+-++ ++
T Consensus 127 rl~~~~~kG~DGvflDnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ar~~~-P~~~ii~n----NG~~i~~~d~~~l 201 (309)
T 2aam_A 127 YLDRVIDQGFKGIYLDRIDSFEYWAQEGVISRRSAARKMINFVLEIAEYVRERK-PDMLIIPQ----NGENILDFDDGQL 201 (309)
T ss_dssp HHHHHHHTTCSEEEEECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEB----SCGGGGGGCCSHH
T ss_pred HHHHHHHcCCCeEeecccchhhhccccCCcchhhhHHHHHHHHHHHHHHHHhhC-CCcEEEEe----cCHHhhcccHhHH
Confidence 3567889999999998886532 222222223 4454 34566655 2555556 77
Q ss_pred HhcCCEEEEeCCCCCCCCCCC---ChHHHHHHHHHHHHHcCCCEEEe
Q 008172 327 VEASDGIMVARGDLGVDIPLE---QIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 327 ~~~sDgImIaRGDLg~e~~~e---~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
....||+..-- +-..-..+ .-......-++.++++||||+..
T Consensus 202 ~~~id~v~~Es--~~~~~~~~~~~~e~~~~~~~l~~~~~~GkpV~~i 246 (309)
T 2aam_A 202 ASTVSGWAVEN--LFYLKTIPLEENETKSRLEYLIRLNRKGKFILSV 246 (309)
T ss_dssp HHHCSEEEEES--SSEETTEECCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HhhcCEEEeee--EEecCCCCCCHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 78899887741 21111001 11111224456778889999973
No 350
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=32.27 E-value=1.1e+02 Score=28.71 Aligned_cols=97 Identities=16% Similarity=0.129 Sum_probs=55.8
Q ss_pred HHHHHHHHHcCCCEEEecCcC-ChhhHHHH-HHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVC-DADSVRHL-KKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLGVDI 344 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~-sa~dv~~i-r~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg~e~ 344 (575)
.+.++.+++.|+++|-+-.=. +.+++.++ +++.... .+.++.- ++.+--.+. +|||-++..|+..
T Consensus 16 ~~~~~~a~~~Gv~~v~lr~k~~~~~~~~~~i~~l~~~~---~~~livn-------d~~~~A~~~gadgvhl~~~~~~~-- 83 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLRKPETPAMYSERLLTLIPEKY---HRRIVTH-------EHFYLKEEFNLMGIHLNARNPSE-- 83 (210)
T ss_dssp HHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCGGG---GGGEEES-------SCTTHHHHTTCSEEECCSSSCSC--
T ss_pred HHHHHHHHHCCCCEEEEccCCCCHHHHHHHHHHHHHHh---CCeEEEe-------CCHHHHHHcCCCEEEECcccccc--
Confidence 578889999999999887532 23333332 2222222 2444441 333434444 8999887777622
Q ss_pred CCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEecc
Q 008172 345 PLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 345 ~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ 406 (575)
+ . ..++.+++.++ |..| +..|. .|+|.+.++.
T Consensus 84 ~--~-------------~~~~~ig~s~~-----------t~~e---~~~A~-~GaDyv~~g~ 115 (210)
T 3ceu_A 84 P--H-------------DYAGHVSCSCH-----------SVEE---VKNRK-HFYDYVFMSP 115 (210)
T ss_dssp C--T-------------TCCSEEEEEEC-----------SHHH---HHTTG-GGSSEEEECC
T ss_pred c--c-------------ccCCEEEEecC-----------CHHH---HHHHh-hCCCEEEECC
Confidence 1 1 12666665432 3333 34455 8999999864
No 351
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=32.12 E-value=56 Score=31.81 Aligned_cols=52 Identities=8% Similarity=0.036 Sum_probs=32.9
Q ss_pred CCHHHHHHHH-HcCCcEEEeeCCCC-------CHHHHHHHHHHHHHHhhhcCCceEEEEeCC
Q 008172 102 CSMEDLEKLA-MGGMNVARLNMCHN-------TREWHLDVIRKIKQLNHEKLFCISVMIDTE 155 (575)
Q Consensus 102 ~~~e~l~~li-~~G~~v~RlN~SHg-------~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~ 155 (575)
.+.+.++.|. +.|+|++|+-++.. +.+...+.++.+=+...+.| +.+++|+-
T Consensus 39 ~~~~d~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~G--i~vild~h 98 (291)
T 1egz_A 39 YTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIAND--MYAIIGWH 98 (291)
T ss_dssp CSHHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHCC--CEEEEEcC
Confidence 4678999999 89999999987642 22233334444434445555 45667763
No 352
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=32.07 E-value=3.2e+02 Score=25.48 Aligned_cols=109 Identities=13% Similarity=0.074 Sum_probs=64.9
Q ss_pred CH-HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEe-----------eecCHHHHhcHHHHHhc-CCEE
Q 008172 267 DW-DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLA-----------KIENLESLQKFEEIVEA-SDGI 333 (575)
Q Consensus 267 D~-~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIa-----------KIEt~~av~nldeI~~~-sDgI 333 (575)
+. +.++.+.+.|+++|.+ ++++.++++|+..+ +.++. .|+. -.+.+++.++. +|.|
T Consensus 37 ~~~~~a~~~~~~G~~~i~~---~~~~~i~~i~~~~~------~p~i~~~~~~~~~~~~~i~~--~~~~i~~~~~~Gad~V 105 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRA---NSVRDIKEIQAITD------LPIIGIIKKDYPPQEPFITA--TMTEVDQLAALNIAVI 105 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEE---ESHHHHHHHHTTCC------SCEEEECBCCCTTSCCCBSC--SHHHHHHHHTTTCSEE
T ss_pred hHHHHHHHHHHCCCcEeec---CCHHHHHHHHHhCC------CCEEeeEcCCCCccccccCC--hHHHHHHHHHcCCCEE
Confidence 44 4455667899999875 57888888876531 23331 1222 23456666666 8999
Q ss_pred EEeCCCCCCCCCC-CChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceE--Eecc
Q 008172 334 MVARGDLGVDIPL-EQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADAL--MLSG 406 (575)
Q Consensus 334 mIaRGDLg~e~~~-e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~v--mLs~ 406 (575)
.+.-.-+. -|. +.+ .++++.+++. ++++++-. -|..| ...+...|+|.+ .+.+
T Consensus 106 ~l~~~~~~--~~~~~~~----~~~i~~i~~~~~~~~v~~~~-----------~t~~e---a~~a~~~Gad~i~~~v~g 163 (234)
T 1yxy_A 106 AMDCTKRD--RHDGLDI----ASFIRQVKEKYPNQLLMADI-----------STFDE---GLVAHQAGIDFVGTTLSG 163 (234)
T ss_dssp EEECCSSC--CTTCCCH----HHHHHHHHHHCTTCEEEEEC-----------SSHHH---HHHHHHTTCSEEECTTTT
T ss_pred EEcccccC--CCCCccH----HHHHHHHHHhCCCCeEEEeC-----------CCHHH---HHHHHHcCCCEEeeeccc
Confidence 87633221 010 122 4677777777 78877632 23333 566788999999 4543
No 353
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=31.97 E-value=68 Score=28.31 Aligned_cols=44 Identities=16% Similarity=0.214 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------ChhHHHHHhccCCCCcEEEEcCc
Q 008172 459 ICNCAVDMANNLGVDAIFVYTK---------HGHMASLLSRNRPNPPIFAFTND 503 (575)
Q Consensus 459 ia~~av~~a~~~~AkaIVVfT~---------SG~TAr~VSr~RP~~PIiAvT~~ 503 (575)
.+...++.|.+.+++.||+-+. -|+++..+.+.-| |||+.+-+.
T Consensus 107 ~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a~-~PVlvV~~~ 159 (163)
T 1tq8_A 107 PVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAK-VDVLIVHTT 159 (163)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHTT-CEEEEECCC
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhCC-CCEEEEeCC
Confidence 3455567888999999888876 2567788888765 999998654
No 354
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=31.89 E-value=2.4e+02 Score=29.60 Aligned_cols=130 Identities=14% Similarity=0.181 Sum_probs=68.6
Q ss_pred CCCccCHHHH--------HHHHHcCCCEEEec-------------CcCChhh-----------------HHHHHHHHhcc
Q 008172 262 TLSKKDWDDI--------EFGIAEGVDFIAMS-------------FVCDADS-----------------VRHLKKYVSGK 303 (575)
Q Consensus 262 ~lsekD~~di--------~~al~~gvd~I~~S-------------fV~sa~d-----------------v~~ir~~l~~~ 303 (575)
.||+.|++.+ ++|.+.|+|+|=+- ..+...| ++++|+.+...
T Consensus 159 ~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~ 238 (419)
T 3l5a_A 159 AMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKE 238 (419)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhh
Confidence 6888887766 46788999999773 3333211 22333333221
Q ss_pred CCCCceEEeeecC------------HHHHhcHHHHHh-c-CCEEEEeCCCCCC---CCCCCChHHHHHHHHHHHHH-c--
Q 008172 304 SSRSIKVLAKIEN------------LESLQKFEEIVE-A-SDGIMVARGDLGV---DIPLEQIPTVQEIIIHVCRQ-L-- 363 (575)
Q Consensus 304 ~~~~i~IIaKIEt------------~~av~nldeI~~-~-sDgImIaRGDLg~---e~~~e~v~~~Qk~Ii~~c~~-~-- 363 (575)
.+++..|..||=- .+.++-++.+.+ . +|.|-|.-|+... .-+... +..+...++..++ .
T Consensus 239 ~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g-~~~~~~~a~~Ik~~v~~ 317 (419)
T 3l5a_A 239 APDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPG-DHFGRPVNQIVYEHLAG 317 (419)
T ss_dssp CCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSS-TTTTSBHHHHHHHHHTT
T ss_pred cCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCC-ccccHHHHHHHHHHcCC
Confidence 1245667777621 233444455555 4 8999998776411 101000 0011122333333 2
Q ss_pred CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 364 NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 364 gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
..|||....+ -|.++ ...++.. +|.|++.
T Consensus 318 ~iPVI~~GgI---------~t~e~---Ae~~L~~-aDlVaiG 346 (419)
T 3l5a_A 318 RIPLIASGGI---------NSPES---ALDALQH-ADMVGMS 346 (419)
T ss_dssp SSCEEECSSC---------CSHHH---HHHHGGG-CSEEEES
T ss_pred CCeEEEECCC---------CCHHH---HHHHHHh-CCcHHHH
Confidence 4899985432 23332 3455666 9999996
No 355
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=31.85 E-value=95 Score=31.78 Aligned_cols=46 Identities=20% Similarity=0.150 Sum_probs=33.0
Q ss_pred HHHHHHHcCCcEEEeeCCCC------CHHHHHHHHHHHHHHhhhcCCceEEEEeC
Q 008172 106 DLEKLAMGGMNVARLNMCHN------TREWHLDVIRKIKQLNHEKLFCISVMIDT 154 (575)
Q Consensus 106 ~l~~li~~G~~v~RlN~SHg------~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl 154 (575)
..+++.++|.+.+.+++.|+ ..+.-.++++.+|++ .|..+.|++|.
T Consensus 156 ~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a---~g~d~~l~vDa 207 (382)
T 1rvk_A 156 FAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREA---VGPDIRLMIDA 207 (382)
T ss_dssp HHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHH---HCTTSEEEEEC
T ss_pred HHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHH---hCCCCeEEEEC
Confidence 45677889999999999997 666666677777654 34345666665
No 356
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=31.81 E-value=4.4e+02 Score=27.02 Aligned_cols=130 Identities=16% Similarity=0.218 Sum_probs=78.7
Q ss_pred HHHHHHHHHcCCCEEEec--------------CcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc--CC
Q 008172 268 WDDIEFGIAEGVDFIAMS--------------FVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA--SD 331 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~S--------------fV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~--sD 331 (575)
.+..+.+.+.|++.|+.- -.+++++++++++.. ++.|++|.=- |...--.|++. +|
T Consensus 27 ~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~arm~~p~~i~~I~~av------~iPV~~K~ri--g~~~e~qilea~GaD 98 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEEIMDAV------SIPVMAKCRI--GHTTEALVLEAIGVD 98 (330)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHC--CCCCCCCCHHHHHHHHHHC------SSCEEEEEET--TCHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCEEEecCCccccccCCcchhhcCCHHHHHHHHHhc------CCCeEEEEee--cchHHHHHHHHcCCC
Confidence 345566778999999543 456888888888644 4677777633 10111123333 78
Q ss_pred EEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCC
Q 008172 332 GIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIG 411 (575)
Q Consensus 332 gImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G 411 (575)
.|.+.. =|. |.+.+..+-| ++.+.|+..... .+.+...++..|+|.+-..||...|
T Consensus 99 ~Id~s~-~l~---p~d~~~~i~k------~~~~~~~~~~a~--------------~lgea~r~~~~Ga~~i~t~ge~g~~ 154 (330)
T 2yzr_A 99 MIDESE-VLT---QADPFFHIYK------KKFNVPFVCGAR--------------NLGEAVRRIWEGAAMIRTKGEAGTG 154 (330)
T ss_dssp EEEEET-TSC---CSCSSCCCCG------GGCSSCEEEECS--------------SHHHHHHHHHHTCSEEEECCCTTSC
T ss_pred EEehhc-cCC---HHHHHHHhhh------hhcccchhhccc--------------cHHHHHHHHhcCcceeeccCCCCcc
Confidence 874320 010 1000000000 134566665432 3456677789999999999999888
Q ss_pred CCHHHHHHHHHHHHHHHhh
Q 008172 412 PFGQKAVSVLQMASSRMEL 430 (575)
Q Consensus 412 ~yPveaV~~m~~I~~~aE~ 430 (575)
.- +|+|+-|+.|..+...
T Consensus 155 ~~-ve~v~H~r~~~~~~~~ 172 (330)
T 2yzr_A 155 NI-VEAVRHMRLMNEAIAQ 172 (330)
T ss_dssp CT-HHHHHHHHHHHHHHHH
T ss_pred cc-hhHHHHHHHHHHHHHH
Confidence 85 8999999988766553
No 357
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=31.73 E-value=2.2e+02 Score=23.48 Aligned_cols=75 Identities=17% Similarity=0.229 Sum_probs=45.1
Q ss_pred HHHHHHhcCCcEEEEEcC----Chh-HHHHHhc--cCCCCcEEEEcCc--HHHHHHhcccCCcEEEEecCCCCHHHH---
Q 008172 463 AVDMANNLGVDAIFVYTK----HGH-MASLLSR--NRPNPPIFAFTND--DSTRMALNLQWGVIPVLVNLSDDMETN--- 530 (575)
Q Consensus 463 av~~a~~~~AkaIVVfT~----SG~-TAr~VSr--~RP~~PIiAvT~~--~~~aR~L~L~~GV~Pvl~~~~~d~d~~--- 530 (575)
|.+...+...++||+-.. +|. ..+.+-+ ..|.+|||++|.. .....++ +..|+.-++.+...+.++.
T Consensus 43 a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~-~~~ga~~~l~Kp~~~~~~l~~~ 121 (144)
T 3kht_A 43 ALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQC-MAAGASSVVDKSSNNVTDFYGR 121 (144)
T ss_dssp HHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHH-HHTTCSEEEECCTTSHHHHHHH
T ss_pred HHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHH-HHcCCCEEEECCCCcHHHHHHH
Confidence 344455567787666543 332 3555555 5689999999965 3444333 6788998888766344443
Q ss_pred HHHHHHHH
Q 008172 531 IAKTIDLI 538 (575)
Q Consensus 531 i~~al~~~ 538 (575)
++.+++..
T Consensus 122 i~~~l~~~ 129 (144)
T 3kht_A 122 IYAIFSYW 129 (144)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
No 358
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=31.59 E-value=2.2e+02 Score=28.71 Aligned_cols=117 Identities=11% Similarity=0.121 Sum_probs=68.5
Q ss_pred HHHHHHcCCCEEEecCc--------------CCh----hhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CC
Q 008172 271 IEFGIAEGVDFIAMSFV--------------CDA----DSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SD 331 (575)
Q Consensus 271 i~~al~~gvd~I~~SfV--------------~sa----~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sD 331 (575)
++...+.|+.+| +.|- ++. ++++.++. ..+.+ +.-++-.-|++ ....++++ .|
T Consensus 114 Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~-A~~~g---L~Ti~~v~~~e---eA~amA~agpD 185 (286)
T 2p10_A 114 LRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAE-AHKLD---LLTTPYVFSPE---DAVAMAKAGAD 185 (286)
T ss_dssp HHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHH-HHHTT---CEECCEECSHH---HHHHHHHHTCS
T ss_pred HHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHH-HHHCC---CeEEEecCCHH---HHHHHHHcCCC
Confidence 344567899998 8886 222 22222222 22333 34444443332 22233444 89
Q ss_pred EEEEeCC-----CCCCCCC--CCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcC-CCCChhhHhhHHHHHHc--ccce
Q 008172 332 GIMVARG-----DLGVDIP--LEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEY-PTPTRAEVADVSEAVRQ--YADA 401 (575)
Q Consensus 332 gImIaRG-----DLg~e~~--~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~-p~PtrAEv~Dv~nav~~--G~D~ 401 (575)
.|.+-+| ..|...+ .++-+...+++.+++++..+-+++- ... |.-|. .|+..++.. |+|+
T Consensus 186 iI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivL-------c~gGpIstp---eDv~~~l~~t~G~~G 255 (286)
T 2p10_A 186 ILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIIL-------SHGGPIANP---EDARFILDSCQGCHG 255 (286)
T ss_dssp EEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEE-------EESTTCCSH---HHHHHHHHHCTTCCE
T ss_pred EEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEE-------ecCCCCCCH---HHHHHHHhcCCCccE
Confidence 9999888 4555544 3555778889999999998877763 243 44444 477777777 9999
Q ss_pred EEec
Q 008172 402 LMLS 405 (575)
Q Consensus 402 vmLs 405 (575)
+.+.
T Consensus 256 ~~gA 259 (286)
T 2p10_A 256 FYGA 259 (286)
T ss_dssp EEES
T ss_pred EEee
Confidence 9985
No 359
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=31.59 E-value=1.2e+02 Score=30.37 Aligned_cols=68 Identities=10% Similarity=0.187 Sum_probs=46.7
Q ss_pred hHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHH-----------hcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHH
Q 008172 292 SVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIV-----------EASDGIMVARGDLGVDIPLEQIPTVQEIIIHVC 360 (575)
Q Consensus 292 dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~-----------~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c 360 (575)
.+..+++.+.+.+ .++.|.+--+.....+|+++++ +-.|.|+-+- +-+.....+-+.|
T Consensus 90 Ka~aa~~~L~~iN-P~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~----------Dn~~~R~~in~~c 158 (292)
T 3h8v_A 90 KVQAAEHTLRNIN-PDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV----------DNFEARMTINTAC 158 (292)
T ss_dssp HHHHHHHHHHHHC-TTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC----------SSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhC-CCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC----------cchhhhhHHHHHH
Confidence 3455666676666 6788877666666567777776 3468777542 2234567788999
Q ss_pred HHcCCCEEEe
Q 008172 361 RQLNKPVIVA 370 (575)
Q Consensus 361 ~~~gKPviva 370 (575)
.++++|.+.+
T Consensus 159 ~~~~~Pli~~ 168 (292)
T 3h8v_A 159 NELGQTWMES 168 (292)
T ss_dssp HHHTCCEEEE
T ss_pred HHhCCCEEEe
Confidence 9999999853
No 360
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=31.52 E-value=1.5e+02 Score=29.63 Aligned_cols=126 Identities=9% Similarity=-0.048 Sum_probs=68.5
Q ss_pred HHHHHHHHHcCCCEEEehhhHHhhhcCCCCChh-hHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhh
Q 008172 354 EIIIHVCRQLNKPVIVASQLLESMVEYPTPTRA-EVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWS 432 (575)
Q Consensus 354 k~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrA-Ev~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~ 432 (575)
.-+...|+..|.|+.+.. |..+ ....+...-..|++.+...++... .++.++.+..+++.++-..
T Consensus 85 ~alA~~a~~~G~~~~iv~-----------p~~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~l~~~~~~-- 150 (325)
T 1j0a_A 85 FVTGLAAKKLGLDAILVL-----------RGKEELKGNYLLDKIMGIETRVYDAKDSF-ELMKYAEEIAEELKREGRK-- 150 (325)
T ss_dssp HHHHHHHHHTTCEEEEEE-----------ESCCCSCHHHHHHHHTTCEEEEESCCSTT-THHHHHHHHHHHHTTSSCC--
T ss_pred HHHHHHHHHhCCcEEEEE-----------CCCCCCCchHHHHHHCCCEEEEeCcchhh-hhhHHHHHHHHHHHHcCCc--
Confidence 456678999999998742 1111 122234455789998776644321 1122333333322111000
Q ss_pred hhhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcC--CcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCc
Q 008172 433 REENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLG--VDAIFVYTKHGHMASLLSR----NRPNPPIFAFTND 503 (575)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~ 503 (575)
.+ .++... ..+ ...+.....+.|+.++++ .+.||+..-+|.|+--+++ +.|...|++|-+.
T Consensus 151 -------~~-~~p~~~-~n~-~~~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~ 217 (325)
T 1j0a_A 151 -------PY-VIPPGG-ASP-IGTLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVG 217 (325)
T ss_dssp -------EE-EECGGG-CSH-HHHTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECS
T ss_pred -------eE-EEcCCC-CCH-HHHHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEec
Confidence 00 011100 001 111222344677777774 6999999999998766554 5799999999774
No 361
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=31.46 E-value=2.2e+02 Score=28.19 Aligned_cols=88 Identities=16% Similarity=0.138 Sum_probs=49.9
Q ss_pred CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHc---CCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEec
Q 008172 330 SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQL---NKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLS 405 (575)
Q Consensus 330 sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~---gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs 405 (575)
+||+++. |= .-|.+.-. ..-.+++++.+.++ ..||++-| ...+-+|.-+.+. |-..|+|++|+.
T Consensus 42 v~gl~~~-Gt-tGE~~~Ls-~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~ 109 (297)
T 3flu_A 42 TDGIVAV-GT-TGESATLS-VEEHTAVIEAVVKHVAKRVPVIAGT---------GANNTVEAIALSQAAEKAGADYTLSV 109 (297)
T ss_dssp CCEEEES-ST-TTTGGGSC-HHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCEEEeC-cc-ccCcccCC-HHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHHHHHHHHHHHHcCCCEEEEC
Confidence 8999984 21 12222211 12233455554442 36998754 3455556555554 667899999997
Q ss_pred cCcCCCCCHHHHHHHHHHHHHHHh
Q 008172 406 GESAIGPFGQKAVSVLQMASSRME 429 (575)
Q Consensus 406 ~ETa~G~yPveaV~~m~~I~~~aE 429 (575)
.=--...-+-+.++..+.|++.+.
T Consensus 110 ~P~y~~~~~~~l~~~f~~va~a~~ 133 (297)
T 3flu_A 110 VPYYNKPSQEGIYQHFKTIAEATS 133 (297)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCC
Confidence 443333334566777777766654
No 362
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=31.36 E-value=66 Score=26.13 Aligned_cols=62 Identities=15% Similarity=0.064 Sum_probs=38.8
Q ss_pred HHHHHHhcCCcEEEEEc----CChh-HHHHHhcc--CCCCcEEEEcCcHHHHHHhcccCCcEEEEecCC
Q 008172 463 AVDMANNLGVDAIFVYT----KHGH-MASLLSRN--RPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLS 524 (575)
Q Consensus 463 av~~a~~~~AkaIVVfT----~SG~-TAr~VSr~--RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~ 524 (575)
|.+...+...+.|++-. .+|. .++.+.+. .|..||+++|..........+..|+.-++.++.
T Consensus 39 a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~g~~~~l~KP~ 107 (127)
T 3i42_A 39 ALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFAKNDLGKEACELFDFYLEKPI 107 (127)
T ss_dssp HHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC-CTTCCHHHHHHCSEEEESSC
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCcchhHHHHHHHhhHHheeCCC
Confidence 33444556678766643 2343 44556555 688999999987655444446677777777654
No 363
>1kzl_A Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} SCOP: b.43.4.3 b.43.4.3
Probab=31.33 E-value=53 Score=31.66 Aligned_cols=55 Identities=13% Similarity=0.242 Sum_probs=42.5
Q ss_pred EEecccccccccCCCCEEEEeCCeeEEEEEEEECCeEEEEEe-------cCeEecCCccccccc
Q 008172 193 VKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCT-------DPGVFLPRAKLSFRR 249 (575)
Q Consensus 193 i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~~~~i~~~V~-------~gG~l~s~K~vn~~r 249 (575)
+.+..+.+.+.+..||.|-+|. +.|.|.++.++.+.+-+. +=|.+.....||+.|
T Consensus 25 l~i~~~~~~~~l~~g~SIAvnG--vcLTV~~~~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLEr 86 (208)
T 1kzl_A 25 MKIEAPQILDDCHTGDSIAVNG--TCLTVTDFDRYHFTVGIAPESLRLTNLGQCKAGDPVNLER 86 (208)
T ss_dssp EEEECGGGCTTCCTTCEEEETT--EEEEEEEECSSEEEEEECHHHHHHSSGGGCCTTCEEEEEE
T ss_pred EEEechHHhcccCCCCEEEECC--EEeeEEEEcCCEEEEEEeHHHHhhccccccCCCCEEEecc
Confidence 4444456778999999999987 899999999988887764 236677777788764
No 364
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=31.29 E-value=3.1e+02 Score=28.23 Aligned_cols=114 Identities=17% Similarity=0.112 Sum_probs=64.9
Q ss_pred CCCccCHHHH--------HHHHHcCCCEEEecCc-------------CCh----------------hhHHHHHHHHhccC
Q 008172 262 TLSKKDWDDI--------EFGIAEGVDFIAMSFV-------------CDA----------------DSVRHLKKYVSGKS 304 (575)
Q Consensus 262 ~lsekD~~di--------~~al~~gvd~I~~SfV-------------~sa----------------~dv~~ir~~l~~~~ 304 (575)
.||+.|++.+ +.|.+.|+|+|=+-.- +.. |-++++|+.+ +
T Consensus 150 ~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~v---g 226 (361)
T 3gka_A 150 ALELDEIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVW---S 226 (361)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHc---C
Confidence 6888888776 4678899999977433 331 2223334433 2
Q ss_pred CCCceEEeeecCHH---------HHhcHHHHHh----c-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHH-HcCCCEEE
Q 008172 305 SRSIKVLAKIENLE---------SLQKFEEIVE----A-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCR-QLNKPVIV 369 (575)
Q Consensus 305 ~~~i~IIaKIEt~~---------av~nldeI~~----~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~-~~gKPviv 369 (575)
++ .|..||=-.+ .+++..++++ . +|.|=+..|..+ .+ .++..+ ..+.|||.
T Consensus 227 -~~-~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~----~~--------~~~~ik~~~~iPvi~ 292 (361)
T 3gka_A 227 -AA-RVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFGG----DA--------IGQQLKAAFGGPFIV 292 (361)
T ss_dssp -GG-GEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCST----TC--------CHHHHHHHHCSCEEE
T ss_pred -CC-eEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCC----HH--------HHHHHHHHcCCCEEE
Confidence 33 5777873211 1233333333 2 799988776622 11 122222 24789997
Q ss_pred ehhhHHhhhcCCCCChhhHhhHHHHHHcc-cceEEec
Q 008172 370 ASQLLESMVEYPTPTRAEVADVSEAVRQY-ADALMLS 405 (575)
Q Consensus 370 aTq~LeSM~~~p~PtrAEv~Dv~nav~~G-~D~vmLs 405 (575)
+.. . |++ +...++..| +|+|++.
T Consensus 293 ~Gg---------i-t~e---~a~~~l~~G~aD~V~iG 316 (361)
T 3gka_A 293 NEN---------F-TLD---SAQAALDAGQADAVAWG 316 (361)
T ss_dssp ESS---------C-CHH---HHHHHHHTTSCSEEEES
T ss_pred eCC---------C-CHH---HHHHHHHcCCccEEEEC
Confidence 642 2 443 334566777 9999996
No 365
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=31.27 E-value=79 Score=32.23 Aligned_cols=46 Identities=20% Similarity=0.093 Sum_probs=33.6
Q ss_pred HHHHHHH-cCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeC
Q 008172 106 DLEKLAM-GGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDT 154 (575)
Q Consensus 106 ~l~~li~-~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl 154 (575)
..+++.+ +|.+.+.+++.|++.+.-.++++.+|++. |..+.|++|.
T Consensus 149 ~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g~~~~l~vDa 195 (370)
T 1nu5_A 149 SALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV---GDRASVRVDV 195 (370)
T ss_dssp HHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH---GGGCEEEEEC
T ss_pred HHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc---CCCCEEEEEC
Confidence 3466777 99999999999988877777777777653 3234566664
No 366
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=31.26 E-value=81 Score=32.14 Aligned_cols=58 Identities=9% Similarity=0.179 Sum_probs=36.1
Q ss_pred CCCCCCHHHHHHHHHcCCcEEEeeCCCCCHH------HHHHHHHHHHHH---hhhcCCceEEEEeCCCC
Q 008172 98 GPACCSMEDLEKLAMGGMNVARLNMCHNTRE------WHLDVIRKIKQL---NHEKLFCISVMIDTEGS 157 (575)
Q Consensus 98 GPas~~~e~l~~li~~G~~v~RlN~SHg~~e------~~~~~i~~ir~~---~~~~~~~i~Il~Dl~Gp 157 (575)
|+.....+.++.|-+.|+|++||-++....+ ...+.++.++++ ..+. -+.+++|+-..
T Consensus 58 ~~~~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~--Gi~vild~H~~ 124 (380)
T 1edg_A 58 SGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDN--KMYVILNTHHD 124 (380)
T ss_dssp TCSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTT--TCEEEEECCSC
T ss_pred CCCcccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHC--CCEEEEeCCCc
Confidence 3444578999999999999999988754211 012233333333 3333 46788888653
No 367
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=31.20 E-value=2.5e+02 Score=27.84 Aligned_cols=124 Identities=6% Similarity=0.013 Sum_probs=70.3
Q ss_pred HHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhh
Q 008172 355 IIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSRE 434 (575)
Q Consensus 355 ~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 434 (575)
-+...|+..|.|+++.. |..+....+...-..|++.+...++. .| .++.+...++.++...+
T Consensus 81 alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~--- 142 (322)
T 1z7w_A 81 GLAFTAAAKGYKLIITM-----------PASMSTERRIILLAFGVELVLTDPAK---GM-KGAIAKAEEILAKTPNG--- 142 (322)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTE---
T ss_pred HHHHHHHHcCCCEEEEe-----------CCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCe---
Confidence 45677899999998741 32222334555667899977654321 12 24544444333221111
Q ss_pred hhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhc--CCcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCcHH
Q 008172 435 ENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNL--GVDAIFVYTKHGHMASLLSR----NRPNPPIFAFTNDDS 505 (575)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~--~AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~~~ 505 (575)
+ ...+... +.++..-....+.++..++ +.+.||+.+-+|.++--+++ ..|...|+++.+...
T Consensus 143 ------~-~i~~~~n--~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~ 210 (322)
T 1z7w_A 143 ------Y-MLQQFEN--PANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVES 210 (322)
T ss_dssp ------E-ECCTTTC--THHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred ------E-eCCCCCC--hhHHHHHHHHHHHHHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 0 1111111 1111112223456777776 36899999999998766665 479999999987643
No 368
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=31.08 E-value=2.1e+02 Score=23.24 Aligned_cols=75 Identities=12% Similarity=0.148 Sum_probs=44.0
Q ss_pred HHHHHhcCCcEEEEEc---------CChh-HHHHHhccCCCCcEEEEcCcHHHHH-HhcccCCcEEEEecCCCCHHHHHH
Q 008172 464 VDMANNLGVDAIFVYT---------KHGH-MASLLSRNRPNPPIFAFTNDDSTRM-ALNLQWGVIPVLVNLSDDMETNIA 532 (575)
Q Consensus 464 v~~a~~~~AkaIVVfT---------~SG~-TAr~VSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~Pvl~~~~~d~d~~i~ 532 (575)
.....+...++|++-. .+|. ..+.+.+..|.+||+++|....... .-.+..|+.-++.+... .++ +.
T Consensus 40 ~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~-~~~-l~ 117 (140)
T 2qr3_A 40 STVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKEGASDFVVKPWD-NQK-LL 117 (140)
T ss_dssp HHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHTTCCEEEEESCC-HHH-HH
T ss_pred HHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCCHHHHHHHHHcCchheeeCCCC-HHH-HH
Confidence 3344455677666643 2333 4556666779999999997665322 22356788888776543 333 34
Q ss_pred HHHHHHHH
Q 008172 533 KTIDLIKM 540 (575)
Q Consensus 533 ~al~~~~~ 540 (575)
.++..+.+
T Consensus 118 ~~l~~~~~ 125 (140)
T 2qr3_A 118 ETLLNAAS 125 (140)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 45544443
No 369
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=30.50 E-value=95 Score=31.58 Aligned_cols=46 Identities=13% Similarity=0.229 Sum_probs=33.5
Q ss_pred HHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeC
Q 008172 106 DLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDT 154 (575)
Q Consensus 106 ~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl 154 (575)
..+++.+.|.+.+.+++.|++.++-.++++.+|++ .|..+.|++|.
T Consensus 147 ~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a---~g~~~~l~vDa 192 (366)
T 1tkk_A 147 DAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKR---VGSAVKLRLDA 192 (366)
T ss_dssp HHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHH---HCSSSEEEEEC
T ss_pred HHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHH---hCCCCeEEEEC
Confidence 34667889999999999998777767777777765 34345566664
No 370
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=30.46 E-value=73 Score=31.62 Aligned_cols=65 Identities=15% Similarity=0.268 Sum_probs=47.5
Q ss_pred CHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEe--eecCHHHHhcHHHHHhc-CCEEEEeC
Q 008172 267 DWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLA--KIENLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIa--KIEt~~av~nldeI~~~-sDgImIaR 337 (575)
..+.+..|++.|+|+|.++. -++++++++++.+.... .+++|.| -| -.+|+.++++. +|+|=++.
T Consensus 191 tlee~~~A~~aGaD~I~ld~-~~~~~l~~~v~~l~~~~-~~~~i~AsGGI----~~~ni~~~~~aGaD~i~vGs 258 (273)
T 2b7n_A 191 SFEEAKNAMNAGADIVMCDN-LSVLETKEIAAYRDAHY-PFVLLEASGNI----SLESINAYAKSGVDAISVGA 258 (273)
T ss_dssp SHHHHHHHHHHTCSEEEEET-CCHHHHHHHHHHHHHHC-TTCEEEEESSC----CTTTHHHHHTTTCSEEECTH
T ss_pred CHHHHHHHHHcCCCEEEECC-CCHHHHHHHHHHhhccC-CCcEEEEECCC----CHHHHHHHHHcCCcEEEEcH
Confidence 35667888999999999987 46899999888876532 3444433 23 24688888888 89988764
No 371
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=30.44 E-value=81 Score=32.33 Aligned_cols=57 Identities=12% Similarity=0.191 Sum_probs=35.4
Q ss_pred CCCCCCHHHHHHHHHcCCcEEEeeCCCCCH--------HHHHHHHHHHHHHhhhcCCceEEEEeCCC
Q 008172 98 GPACCSMEDLEKLAMGGMNVARLNMCHNTR--------EWHLDVIRKIKQLNHEKLFCISVMIDTEG 156 (575)
Q Consensus 98 GPas~~~e~l~~li~~G~~v~RlN~SHg~~--------e~~~~~i~~ir~~~~~~~~~i~Il~Dl~G 156 (575)
|..-.+.+.++.|-+.|+|++||-++.... +...+.++.+=+...+.| +.+++|+-.
T Consensus 49 g~~~~t~~di~~ik~~G~N~vRipi~w~~~~~~~g~~d~~~l~~ld~vVd~a~~~G--i~vIldlH~ 113 (353)
T 3l55_A 49 GQPETTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMNAG--LYAIVNVHH 113 (353)
T ss_dssp SCCCCCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHHHT--CEEEEECCT
T ss_pred CCCCCCHHHHHHHHHcCCCEEEEcccHHHhcCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEECCC
Confidence 443447899999999999999999875321 222223333222233333 677888854
No 372
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=30.33 E-value=2e+02 Score=23.21 Aligned_cols=73 Identities=14% Similarity=0.137 Sum_probs=44.0
Q ss_pred HHhcCCcEEEEEcC----Chh-HHHHHhccCCCCcEEEEcCcHHH--HHHhcccCCcEEEEecCCCCHHHHHHHHHHHHH
Q 008172 467 ANNLGVDAIFVYTK----HGH-MASLLSRNRPNPPIFAFTNDDST--RMALNLQWGVIPVLVNLSDDMETNIAKTIDLIK 539 (575)
Q Consensus 467 a~~~~AkaIVVfT~----SG~-TAr~VSr~RP~~PIiAvT~~~~~--aR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~~~ 539 (575)
..+...+.|++-.. +|. ..+.+-+..|..||+.+|..... ..+ .+..|+.-++.++.. .++ +..++..+.
T Consensus 42 ~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~-~~~~g~~~~l~kp~~-~~~-l~~~i~~~~ 118 (134)
T 3f6c_A 42 VETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKH-CADAGANGFVSKKEG-MNN-IIAAIEAAK 118 (134)
T ss_dssp HHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC---CTHHH-HHHTTCSEEEEGGGC-THH-HHHHHHHHH
T ss_pred HHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCCCChHHHHH-HHHhCCCEEEeCCCC-HHH-HHHHHHHHH
Confidence 34456787776533 443 56677777899999999987653 333 357788888887643 233 444555555
Q ss_pred HcC
Q 008172 540 MKG 542 (575)
Q Consensus 540 ~~g 542 (575)
+.+
T Consensus 119 ~~~ 121 (134)
T 3f6c_A 119 NGY 121 (134)
T ss_dssp TTC
T ss_pred CCC
Confidence 443
No 373
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=30.28 E-value=1.9e+02 Score=29.07 Aligned_cols=88 Identities=16% Similarity=0.136 Sum_probs=49.8
Q ss_pred CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHc---CCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEec
Q 008172 330 SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQL---NKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLS 405 (575)
Q Consensus 330 sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~---gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs 405 (575)
+|||++. |= .-|.+.-. ..-.+++++.+.+. ..||++-| ...+-+|..+.+. |-..|+|++|+.
T Consensus 58 v~Gl~v~-Gt-TGE~~~Ls-~~Er~~v~~~~v~~~~grvpViaGv---------g~~st~eai~la~~A~~~Gadavlv~ 125 (314)
T 3qze_A 58 TNAIVAV-GT-TGESATLD-VEEHIQVIRRVVDQVKGRIPVIAGT---------GANSTREAVALTEAAKSGGADACLLV 125 (314)
T ss_dssp CCEEEES-SG-GGTGGGCC-HHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCEEEEC-cc-ccChhhCC-HHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHHHHHHHHHHHHcCCCEEEEc
Confidence 8999994 21 22222211 12233444444432 36998754 3445556555554 667899999997
Q ss_pred cCcCCCCCHHHHHHHHHHHHHHHh
Q 008172 406 GESAIGPFGQKAVSVLQMASSRME 429 (575)
Q Consensus 406 ~ETa~G~yPveaV~~m~~I~~~aE 429 (575)
.=--...-+.+.++..+.|++.+.
T Consensus 126 ~P~y~~~s~~~l~~~f~~va~a~~ 149 (314)
T 3qze_A 126 TPYYNKPTQEGMYQHFRHIAEAVA 149 (314)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHSC
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcC
Confidence 433333334567777777776654
No 374
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=30.17 E-value=80 Score=30.93 Aligned_cols=93 Identities=15% Similarity=0.186 Sum_probs=58.1
Q ss_pred CH-HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeee--------cCHHHHhcHHHHHhcCCEEEEeC
Q 008172 267 DW-DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKI--------ENLESLQKFEEIVEASDGIMVAR 337 (575)
Q Consensus 267 D~-~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKI--------Et~~av~nldeI~~~sDgImIaR 337 (575)
|. +.++.|.+.|++.+++ -.+.++...+.++.+.. + .+.+-+ +..+-++.+.+.++.. +|=
T Consensus 15 d~~~vl~~a~~~gV~~i~v--~~~~~~~~~~~~la~~~--~--~v~~~~GiHP~~~~~~~~~l~~l~~~~~~~----vaI 84 (254)
T 3gg7_A 15 DPVAVARACEERQLTVLSV--TTTPAAWRGTLALAAGR--P--HVWTALGFHPEVVSERAADLPWFDRYLPET----RFV 84 (254)
T ss_dssp SHHHHHHHHHHTTCEEEEC--CSSGGGHHHHHGGGTTC--T--TEEECBCCCGGGTTTTGGGTHHHHHHGGGC----SEE
T ss_pred CHHHHHHHHHHCCCcEEEe--cCCHHHHHHHHHHHHhC--C--CeEEEEeeCcccccccHHHHHHHHHHhhhc----cEE
Confidence 55 4567888999998776 35788888877765432 1 233322 2223344455555332 444
Q ss_pred CCCCCCCCCC--ChHHHHH----HHHHHHHHcCCCEE-E
Q 008172 338 GDLGVDIPLE--QIPTVQE----IIIHVCRQLNKPVI-V 369 (575)
Q Consensus 338 GDLg~e~~~e--~v~~~Qk----~Ii~~c~~~gKPvi-v 369 (575)
|.-|+++-.. .-...|+ +.++.|++.++||+ +
T Consensus 85 GEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSi 123 (254)
T 3gg7_A 85 GEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSI 123 (254)
T ss_dssp EEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 6777776432 3445675 66788999999999 7
No 375
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=30.09 E-value=84 Score=26.36 Aligned_cols=44 Identities=7% Similarity=0.015 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC------hhHHHHHhccCCCCcEEEEcCc
Q 008172 459 ICNCAVDMANNLGVDAIFVYTKH------GHMASLLSRNRPNPPIFAFTND 503 (575)
Q Consensus 459 ia~~av~~a~~~~AkaIVVfT~S------G~TAr~VSr~RP~~PIiAvT~~ 503 (575)
.+...++.|.+.+++.||+-++. |+++..+.+.-| |||+.+-+.
T Consensus 90 ~~~~I~~~a~~~~~dliV~G~~~~~~~~lgs~~~~vl~~~~-~pVlvv~~~ 139 (141)
T 1jmv_A 90 LGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTIK-IDMLVVPLR 139 (141)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCHHHHHHHHHHHHTTCC-SEEEEEECC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCchhhhhcchHHHHHhcCC-CCEEEeeCC
Confidence 44555678889999999988762 456777777665 999988554
No 376
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=30.06 E-value=1.6e+02 Score=29.31 Aligned_cols=69 Identities=7% Similarity=0.151 Sum_probs=46.8
Q ss_pred cCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEE
Q 008172 266 KDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMV 335 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImI 335 (575)
.+.+.++.+...|+|||++-.=..+.+-.++..++.........++.+|=..+. ..|..++.. +|+||+
T Consensus 48 ~~p~~~e~a~~~GaD~v~lDlEh~~~~~~~~~~~l~a~~~~~~~~~VRv~~~d~-~di~~~ld~ga~~Iml 117 (287)
T 2v5j_A 48 SSSYSAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDP-VQIKQLLDVGTQTLLV 117 (287)
T ss_dssp CCHHHHHHHHTSCCSEEEEESSSSSCCHHHHHHHHHHHTTSSSEEEEECSSSCH-HHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHhCCCCEEEEeCCCccchHHHHHHHHHHHHhcCCCEEEEECCCCH-HHHHHHHhCCCCEEEe
Confidence 356777888999999999987556666666666665322123567888743332 256777766 799998
No 377
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=30.06 E-value=1.5e+02 Score=27.36 Aligned_cols=109 Identities=16% Similarity=0.173 Sum_probs=64.7
Q ss_pred HHHHHHHHHcCCCEE--E---ecCcCC----hhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeC
Q 008172 268 WDDIEFGIAEGVDFI--A---MSFVCD----ADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 268 ~~di~~al~~gvd~I--~---~SfV~s----a~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaR 337 (575)
.+.++.+.+.|+|++ - -+|+++ .+.++++++.+ + ..+.+-.++.+++ +.++...+. +|++.+.-
T Consensus 19 ~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~---~-~~~~v~l~v~d~~--~~i~~~~~~gad~v~vh~ 92 (220)
T 2fli_A 19 ASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS---K-LVFDCHLMVVDPE--RYVEAFAQAGADIMTIHT 92 (220)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---C-SEEEEEEESSSGG--GGHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhC---C-CCEEEEEeecCHH--HHHHHHHHcCCCEEEEcc
Confidence 456778888999984 2 255666 56666666533 2 2356667877763 235555555 89998852
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEe
Q 008172 338 GDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALML 404 (575)
Q Consensus 338 GDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmL 404 (575)
+. .+.. ...++.++++|+.++++. +|. |..|. ..++..++|.+++
T Consensus 93 ~~------~~~~----~~~~~~~~~~g~~i~~~~--------~~~-t~~e~---~~~~~~~~d~vl~ 137 (220)
T 2fli_A 93 ES------TRHI----HGALQKIKAAGMKAGVVI--------NPG-TPATA---LEPLLDLVDQVLI 137 (220)
T ss_dssp GG------CSCH----HHHHHHHHHTTSEEEEEE--------CTT-SCGGG---GGGGTTTCSEEEE
T ss_pred Cc------cccH----HHHHHHHHHcCCcEEEEE--------cCC-CCHHH---HHHHHhhCCEEEE
Confidence 11 1222 355666777898888874 111 22221 2334577888865
No 378
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=30.00 E-value=82 Score=31.27 Aligned_cols=52 Identities=12% Similarity=0.032 Sum_probs=40.0
Q ss_pred HHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeCCCC
Q 008172 104 MEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTEGS 157 (575)
Q Consensus 104 ~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~Gp 157 (575)
.+..++|++.|+++.=+|+--...|+..++...|+.+.+..+ +.|.+|+.-|
T Consensus 37 ~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~--~pisIDT~~~ 88 (271)
T 2yci_X 37 QEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVD--LPCCLDSTNP 88 (271)
T ss_dssp HHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCC--CCEEEECSCH
T ss_pred HHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCC--CeEEEeCCCH
Confidence 345689999999999999977777788888888888776654 4566677533
No 379
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=29.99 E-value=3.9e+02 Score=26.99 Aligned_cols=144 Identities=12% Similarity=0.174 Sum_probs=80.7
Q ss_pred CCCccCHHHHHHHH-HcCCCEEEecCcCCh-------------hhHHHHHHHHhccCCCCceEEeeecCHH-HHhcHHHH
Q 008172 262 TLSKKDWDDIEFGI-AEGVDFIAMSFVCDA-------------DSVRHLKKYVSGKSSRSIKVLAKIENLE-SLQKFEEI 326 (575)
Q Consensus 262 ~lsekD~~di~~al-~~gvd~I~~SfV~sa-------------~dv~~ir~~l~~~~~~~i~IIaKIEt~~-av~nldeI 326 (575)
.++..|+..|-.++ +.|+|.|=+-|-.++ +.++.+++ + +++++-+-+=... .-+|+++.
T Consensus 20 ~~~~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~-~-----~~~~~~~L~r~~~~~~~dv~~~ 93 (320)
T 3dxi_A 20 DFNSKIVDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKHLRN-I-----STKKIAIMLNEKNTTPEDLNHL 93 (320)
T ss_dssp CCCHHHHHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHHHHH-H-----CCSEEEEEEEGGGCCGGGHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCEEEEecccCCccccccccccChHHHHHHHhh-c-----cCCeEEEEecCCCCChhhHHHH
Confidence 56777876666555 579999966543343 33444444 2 2344444432211 11345554
Q ss_pred Hh----cCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCCh-hhHhhHHHHHHcccce
Q 008172 327 VE----ASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTR-AEVADVSEAVRQYADA 401 (575)
Q Consensus 327 ~~----~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~Ptr-AEv~Dv~nav~~G~D~ 401 (575)
.. -.|.+-|. .++ .+ ...-...++.++++|..|.+.-... .|..+. ..+..+. .+..|+|.
T Consensus 94 ~~a~~~Gvd~~ri~-~~~------~n-le~~~~~v~~ak~~G~~v~~~~~~~-----~~~~~~~~~l~~~~-~~~~G~~~ 159 (320)
T 3dxi_A 94 LLPIIGLVDMIRIA-IDP------QN-IDRAIVLAKAIKTMGFEVGFNVMYM-----SKWAEMNGFLSKLK-AIDKIADL 159 (320)
T ss_dssp HGGGTTTCSEEEEE-ECG------GG-HHHHHHHHHHHHTTTCEEEEEECCT-----TTGGGSTTSGGGGG-GGTTTCSE
T ss_pred HHhhhcCCCEEEEE-ecH------HH-HHHHHHHHHHHHHCCCEEEEEEEeC-----CCCCCHHHHHHHHH-HhhCCCCE
Confidence 32 27888886 121 22 2334577888999999998742211 121111 2233333 35679999
Q ss_pred EEeccCcCCCCCHHHHHHHHHHHHH
Q 008172 402 LMLSGESAIGPFGQKAVSVLQMASS 426 (575)
Q Consensus 402 vmLs~ETa~G~yPveaV~~m~~I~~ 426 (575)
+.|. +|+=.-.|-++-+.+..+.+
T Consensus 160 i~l~-Dt~G~~~P~~~~~lv~~l~~ 183 (320)
T 3dxi_A 160 FCMV-DSFGGITPKEVKNLLKEVRK 183 (320)
T ss_dssp EEEE-CTTSCCCHHHHHHHHHHHHH
T ss_pred EEEC-cccCCCCHHHHHHHHHHHHH
Confidence 9998 66655679887777666643
No 380
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=29.98 E-value=1.5e+02 Score=28.53 Aligned_cols=66 Identities=11% Similarity=0.181 Sum_probs=43.3
Q ss_pred HHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 293 VRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 293 v~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
++.+.+.+.+.+ ..+.+.+--+... -+|++++++-.|.|+.+-++ +.....+.+.|++.|+|++.+
T Consensus 87 a~~~~~~l~~~n-p~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 87 VESARDALTRIN-PHIAITPVNALLD-DAELAALIAEHDLVLDCTDN----------VAVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp HHHHHHHHHHHC-TTSEEEEECSCCC-HHHHHHHHHTSSEEEECCSS----------HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHC-CCcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCC----------HHHHHHHHHHHHHcCCCEEEe
Confidence 444555555544 4455544332222 25778888889999987332 346678889999999999975
No 381
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=29.80 E-value=76 Score=26.63 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC--------ChhHHHHHhccCCCCcEEEE
Q 008172 459 ICNCAVDMANNLGVDAIFVYTK--------HGHMASLLSRNRPNPPIFAF 500 (575)
Q Consensus 459 ia~~av~~a~~~~AkaIVVfT~--------SG~TAr~VSr~RP~~PIiAv 500 (575)
.+...++.|.+.+++.||+-++ -|+++..+.+.-| ||++.+
T Consensus 94 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~v~~~~~-~pVlvv 142 (143)
T 3fdx_A 94 PKDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHAE-CSVLVV 142 (143)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSCHHHHHHHHHCS-SEEEEE
T ss_pred hHHHHHHHHHHhCCCEEEEeCCCCCCeeeeeccHHHHHHHhCC-CCEEEe
Confidence 4555667888999999998875 3567888888655 999876
No 382
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=29.80 E-value=3.2e+02 Score=25.54 Aligned_cols=90 Identities=3% Similarity=0.032 Sum_probs=51.8
Q ss_pred HHHHHHHHHcCCCEEEecCc-----CChhhHHHHHHHHhccCCCCceEEee--ecCHHHHhcHHHHHhc--CCEEEEeCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFV-----CDADSVRHLKKYVSGKSSRSIKVLAK--IENLESLQKFEEIVEA--SDGIMVARG 338 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV-----~sa~dv~~ir~~l~~~~~~~i~IIaK--IEt~~av~nldeI~~~--sDgImIaRG 338 (575)
.+.++.+.+.|+|+|=+... .++++++++++.+++.|. .+..+.- .++.+.++..=++++. ++.|.+.+|
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl-~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p~ 111 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKV-TGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPN 111 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTC-EEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCC-eEEEEeccccCCHHHHHHHHHHHHHhCCCEEEecCC
Confidence 35667888999999987753 368889999999988762 1111111 1233333333333333 456655443
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHcCCCEEE
Q 008172 339 DLGVDIPLEQIPTVQEIIIHVCRQLNKPVIV 369 (575)
Q Consensus 339 DLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviv 369 (575)
...-+++.+.|.++|..+.+
T Consensus 112 -----------~~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 112 -----------YELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp -----------GGGHHHHHHHHHHHTCEEEE
T ss_pred -----------HHHHHHHHHHHHHcCCEEEE
Confidence 12235566666666665553
No 383
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=29.75 E-value=2e+02 Score=23.98 Aligned_cols=76 Identities=13% Similarity=0.095 Sum_probs=45.6
Q ss_pred HHHHhcCCcEEEEEcC----Chh-HHHHHhccCCCCcEEEEcCcHHHHH-HhcccCCcEEEEecCCCCHHHHHHHHHHHH
Q 008172 465 DMANNLGVDAIFVYTK----HGH-MASLLSRNRPNPPIFAFTNDDSTRM-ALNLQWGVIPVLVNLSDDMETNIAKTIDLI 538 (575)
Q Consensus 465 ~~a~~~~AkaIVVfT~----SG~-TAr~VSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~Pvl~~~~~d~d~~i~~al~~~ 538 (575)
+...+...+.|++-.. +|. ..+.+.+..|..||+++|....... .-.+..|+.-++.+.. +.++. ..++..+
T Consensus 55 ~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~-~~~~l-~~~i~~~ 132 (152)
T 3eul_A 55 ELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDS-TRTEI-VKAVLDC 132 (152)
T ss_dssp HHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTC-CHHHH-HHHHHHH
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCCEEEecCC-CHHHH-HHHHHHH
Confidence 3444556787766432 343 5567777789999999997654322 2235678888887654 34443 4445444
Q ss_pred HHcC
Q 008172 539 KMKG 542 (575)
Q Consensus 539 ~~~g 542 (575)
.+.+
T Consensus 133 ~~~~ 136 (152)
T 3eul_A 133 AKGR 136 (152)
T ss_dssp HHCC
T ss_pred HcCC
Confidence 4433
No 384
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=29.64 E-value=73 Score=26.86 Aligned_cols=41 Identities=15% Similarity=0.170 Sum_probs=31.9
Q ss_pred HHHHHHH-HHHhcCCcEEEEEcC---------ChhHHHHHhccCCCCcEEEE
Q 008172 459 ICNCAVD-MANNLGVDAIFVYTK---------HGHMASLLSRNRPNPPIFAF 500 (575)
Q Consensus 459 ia~~av~-~a~~~~AkaIVVfT~---------SG~TAr~VSr~RP~~PIiAv 500 (575)
.+...++ .|.+.+++.||+-++ -|+++..+.+.-| ||++.+
T Consensus 95 ~~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 145 (146)
T 3s3t_A 95 PKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAP-CNVIVI 145 (146)
T ss_dssp HHHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHCS-SEEEEE
T ss_pred hHHHHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccCC-CCEEEe
Confidence 4555667 788899998888765 3678888888777 999876
No 385
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=29.51 E-value=3e+02 Score=26.69 Aligned_cols=108 Identities=13% Similarity=0.101 Sum_probs=57.4
Q ss_pred cCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCc---CCCCCHHHHHHHHHHHHHHHhhhhhhhhhHH
Q 008172 363 LNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGES---AIGPFGQKAVSVLQMASSRMELWSREENRQS 439 (575)
Q Consensus 363 ~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ET---a~G~yPveaV~~m~~I~~~aE~~~~~~~~~~ 439 (575)
.|.++-++|-+ ..-..+.|+...+.++..|+.+|||-|=+-=-- -.|+|. +..+-+..+.+.+..... +
T Consensus 60 ~~~~v~v~tVi--gFP~G~~~~~~K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~-~v~~ei~~v~~a~~~~~l-----K 131 (231)
T 3ndo_A 60 APSGLAIAAVA--GFPSGKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLD-AVSADITAVRKAVRAATL-----K 131 (231)
T ss_dssp CCTTCEEEEEE--STTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHH-HHHHHHHHHHHHTTTSEE-----E
T ss_pred cCCCCeEEEEe--cCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehHhhhcccHH-HHHHHHHHHHHHccCCce-----E
Confidence 45566666543 333445677778899999999999987542111 125553 233334444444321100 0
Q ss_pred hhhcccccCCCCCCchhhHHHHHHHHHHHhcCCcEEEEEcCChhH
Q 008172 440 ALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHM 484 (575)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~AkaIVVfT~SG~T 484 (575)
-+.....+. . + ..+.--..|+++|.+.+|+ +|=|.||++
T Consensus 132 vIiEt~~L~-~-~--~t~eei~~a~~ia~~aGAD--fVKTSTGf~ 170 (231)
T 3ndo_A 132 VIVESAALL-E-F--SGEPLLADVCRVARDAGAD--FVKTSTGFH 170 (231)
T ss_dssp EECCHHHHH-H-H--TCHHHHHHHHHHHHHTTCS--EEECCCSCC
T ss_pred EEEECcccC-C-C--CCHHHHHHHHHHHHHHCcC--EEEcCCCCC
Confidence 000000010 0 0 0234455688999999999 567777654
No 386
>4e8b_A Ribosomal RNA small subunit methyltransferase E; 16S rRNA methyltransferase; 2.25A {Escherichia coli}
Probab=29.41 E-value=1.3e+02 Score=29.34 Aligned_cols=73 Identities=16% Similarity=0.150 Sum_probs=42.4
Q ss_pred cCCCCEEEEeCC---eeEEEEEEEECCeEEEEEecCeEecCCcccccccCcccccccccCCCCCccCHHHHHHHHHcCCC
Q 008172 204 IEVGDELVIDGG---MASFEVIEKVGNDLRCKCTDPGVFLPRAKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVD 280 (575)
Q Consensus 204 v~~Gd~IliDDG---~i~l~V~~~~~~~i~~~V~~gG~l~s~K~vn~~r~g~~~~~~~~lp~lsekD~~di~~al~~gvd 280 (575)
+++||.|.+-|| ....+|.+++.+.+.+++...-.........+ -.-..+|. .++--..+..|.+.|++
T Consensus 34 ~~~Gd~v~l~dg~g~~~~a~I~~i~~~~~~~~i~~~~~~~~e~~~~v-------~L~~al~K-~~r~e~ilqkatELGv~ 105 (251)
T 4e8b_A 34 MGPGQALQLFDGSNQVFDAEITSASKKSVEVKVLEGQIDDRESPLHI-------HLGQVMSR-GEKMEFTIQKSIELGVS 105 (251)
T ss_dssp CCSCCEEEEECSSSEEEEEEEEEECSSCEEEEEEEEEECCCCCSSEE-------EEEEECCS-SSHHHHHHHHHHHTTCC
T ss_pred CCCCCEEEEEeCCCcEEEEEEEEeecceEEEEEeeeecCCCCCCceE-------EEEEEeec-hhHHHHHHHHHHhhCCC
Confidence 467999988654 35677888888888877754222111111110 01122332 23333566789999999
Q ss_pred EEEe
Q 008172 281 FIAM 284 (575)
Q Consensus 281 ~I~~ 284 (575)
-|..
T Consensus 106 ~I~p 109 (251)
T 4e8b_A 106 LITP 109 (251)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9753
No 387
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=29.39 E-value=3.2e+02 Score=24.77 Aligned_cols=116 Identities=20% Similarity=0.153 Sum_probs=61.4
Q ss_pred HHcCCCEEEecC----cCChhhHHHHHHHHhccCCCCceEE--eeecC-HHHHhcHHHHHhc-CCEEEEeCCCCCCCCCC
Q 008172 275 IAEGVDFIAMSF----VCDADSVRHLKKYVSGKSSRSIKVL--AKIEN-LESLQKFEEIVEA-SDGIMVARGDLGVDIPL 346 (575)
Q Consensus 275 l~~gvd~I~~Sf----V~sa~dv~~ir~~l~~~~~~~i~II--aKIEt-~~av~nldeI~~~-sDgImIaRGDLg~e~~~ 346 (575)
+..|+|+|=+.+ -...+.++++|+.. .+..++ .|+.+ ++- -.+..++. +|++.+-.+.
T Consensus 22 ~~~~v~~iev~~~~~~~~g~~~i~~l~~~~-----~~~~i~~~l~~~di~~~--~~~~a~~~Gad~v~vh~~~------- 87 (207)
T 3ajx_A 22 VAEYVDIIELGTPLIKAEGLSVITAVKKAH-----PDKIVFADMKTMDAGEL--EADIAFKAGADLVTVLGSA------- 87 (207)
T ss_dssp HGGGCSEEEECHHHHHHHCTHHHHHHHHHS-----TTSEEEEEEEECSCHHH--HHHHHHHTTCSEEEEETTS-------
T ss_pred hhccCCEEEECcHHHHhhCHHHHHHHHHhC-----CCCeEEEEEEecCccHH--HHHHHHhCCCCEEEEeccC-------
Confidence 333788865533 12344555555532 123455 58877 332 24556666 8999874211
Q ss_pred CChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceE-EeccCcC--CCCCHHH
Q 008172 347 EQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADAL-MLSGESA--IGPFGQK 416 (575)
Q Consensus 347 e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~v-mLs~ETa--~G~yPve 416 (575)
. ...-+.+++.|+++|++++++. + | + .|..| .+..+...|+|.+ +..+.++ .|..|.+
T Consensus 88 ~--~~~~~~~~~~~~~~g~~~gv~~--~-s----~-~~p~~--~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~ 148 (207)
T 3ajx_A 88 D--DSTIAGAVKAAQAHNKGVVVDL--I-G----I-EDKAT--RAQEVRALGAKFVEMHAGLDEQAKPGFDLN 148 (207)
T ss_dssp C--HHHHHHHHHHHHHHTCEEEEEC--T-T----C-SSHHH--HHHHHHHTTCSEEEEECCHHHHTSTTCCTH
T ss_pred C--hHHHHHHHHHHHHcCCceEEEE--e-c----C-CChHH--HHHHHHHhCCCEEEEEecccccccCCCchH
Confidence 1 1234577888899999986642 1 1 1 12333 1122234589998 6544432 4554554
No 388
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=29.38 E-value=52 Score=33.63 Aligned_cols=105 Identities=16% Similarity=0.214 Sum_probs=66.1
Q ss_pred ccCHH-HHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCC-CCceEEeee-------cC--HH-HHhcHHHHHhcCCE
Q 008172 265 KKDWD-DIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSS-RSIKVLAKI-------EN--LE-SLQKFEEIVEASDG 332 (575)
Q Consensus 265 ekD~~-di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~-~~i~IIaKI-------Et--~~-av~nldeI~~~sDg 332 (575)
+.|.+ .|..|.+.|++.++++-+ +.++..++.++.+.... ..+.+.+-+ .. .+ .++.|.+.++..+.
T Consensus 51 ~~d~~~vl~rA~~aGV~~ii~~g~-~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~ 129 (325)
T 3ipw_A 51 EEDIDVVLQRAERNGLSHIIITSG-CLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLCEKNID 129 (325)
T ss_dssp CCCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGGGGGGGSTTHHHHHHHHHHHTGG
T ss_pred ccCHHHHHHHHHHcCCcEEEEccC-CHHHHHHHHHHHHHCCCcccceEEEEEEECcchhhcCCchHHHHHHHHHHhcCCC
Confidence 56664 567899999999888765 57777777776654320 001344333 11 11 45666677665433
Q ss_pred EEEeCCCCCCCCCC-C-ChHHHHH----HHHHHHHH-cCCCEEEe
Q 008172 333 IMVARGDLGVDIPL-E-QIPTVQE----IIIHVCRQ-LNKPVIVA 370 (575)
Q Consensus 333 ImIaRGDLg~e~~~-e-~v~~~Qk----~Ii~~c~~-~gKPviva 370 (575)
=.+|=|+.|+++-. . .-...|+ +-++.|++ .++||++=
T Consensus 130 ~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH 174 (325)
T 3ipw_A 130 KVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFH 174 (325)
T ss_dssp GEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEE
T ss_pred CEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEE
Confidence 45566888887743 2 2345665 56788999 99999973
No 389
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=29.24 E-value=82 Score=27.51 Aligned_cols=44 Identities=16% Similarity=0.213 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------ChhHHHHHhccCCCCcEEEEcCc
Q 008172 459 ICNCAVDMANNLGVDAIFVYTK---------HGHMASLLSRNRPNPPIFAFTND 503 (575)
Q Consensus 459 ia~~av~~a~~~~AkaIVVfT~---------SG~TAr~VSr~RP~~PIiAvT~~ 503 (575)
.+...++.|.+.+++.||+-++ -|+++..+.+.-| |||+.+-+.
T Consensus 105 ~~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~~-~PVlvv~~~ 157 (170)
T 2dum_A 105 PWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTK-KPVLIIKEV 157 (170)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHCS-SCEEEECCC
T ss_pred hHHHHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhCC-CCEEEEccC
Confidence 4555668888999999888876 2567888888766 999998544
No 390
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=29.21 E-value=1e+02 Score=31.74 Aligned_cols=63 Identities=11% Similarity=0.003 Sum_probs=41.1
Q ss_pred CceEEEecCCC--CCCHHH----HHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeCC
Q 008172 90 KTKMVCTIGPA--CCSMED----LEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTE 155 (575)
Q Consensus 90 ~tkIi~TiGPa--s~~~e~----l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~ 155 (575)
+....++.|.. ..+++. .+++.++|.+.+.++..|++.++-.++++.+|++ .|..+.|++|..
T Consensus 150 ~v~~y~~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g~~~~l~vDan 218 (392)
T 1tzz_A 150 RVFVYAAGGYYYPGKGLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEE---IGKDAQLAVDAN 218 (392)
T ss_dssp EEEEEEECCCC----CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHH---HTTTCEEEEECT
T ss_pred CeeEEEeCCcccCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHh---cCCCCeEEEECC
Confidence 44555554431 124543 4677889999999999998877777777777764 343455666653
No 391
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=29.13 E-value=4e+02 Score=26.72 Aligned_cols=121 Identities=14% Similarity=0.171 Sum_probs=72.6
Q ss_pred HHHHHHHHcCCCEEEecCcCCh--hhHHHHHHHHhccCCCCceEEee-e--cCHHHHhcHHHHHhc-CCEEEEeCCCCCC
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDA--DSVRHLKKYVSGKSSRSIKVLAK-I--ENLESLQKFEEIVEA-SDGIMVARGDLGV 342 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa--~dv~~ir~~l~~~~~~~i~IIaK-I--Et~~av~nldeI~~~-sDgImIaRGDLg~ 342 (575)
+||..+.+.|+|+|.+-+.+.- -|+...++++...+. ..+.-. = +..+..+.++.+++. .|-|+-.=+.-+.
T Consensus 115 ~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~--l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~a 192 (287)
T 3iwp_A 115 ADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRP--LPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSSA 192 (287)
T ss_dssp HHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTT--SCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSST
T ss_pred HHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCC--CcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCCh
Confidence 6888999999999999986543 678888888876542 222111 0 111245667888875 8999997553322
Q ss_pred CCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCc
Q 008172 343 DIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGES 408 (575)
Q Consensus 343 e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ET 408 (575)
.+.++.+.+.+ +. ..|+..|++.-=+ .++ -+.++.. .-|++.+.+|+-+
T Consensus 193 ---~~Gl~~Lk~Lv-~~--a~~rI~ImaGGGV-------~~~--Ni~~l~~--~tG~~~~H~S~~~ 241 (287)
T 3iwp_A 193 ---LEGLPLIKRLI-EQ--AKGRIVVMPGGGI-------TDR--NLQRILE--GSGATEFHCSARS 241 (287)
T ss_dssp ---TTTHHHHHHHH-HH--HTTSSEEEECTTC-------CTT--THHHHHH--HHCCSEEEECCEE
T ss_pred ---HHhHHHHHHHH-HH--hCCCCEEEECCCc-------CHH--HHHHHHH--hhCCCEEeECcCc
Confidence 46666665543 22 2345556553222 222 2233322 2799999999643
No 392
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=29.07 E-value=88 Score=32.28 Aligned_cols=62 Identities=16% Similarity=0.075 Sum_probs=41.0
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeC
Q 008172 90 KTKMVCTIGPACCSME----DLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDT 154 (575)
Q Consensus 90 ~tkIi~TiGPas~~~e----~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl 154 (575)
+....+|+|....+++ ..+++.++|.+.+.+...|++.+.-.++++.+|+ ..|..+.|++|.
T Consensus 132 ~vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~---a~G~~~~l~vDa 197 (389)
T 2oz8_A 132 RVKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKT---CVPAGSKVMIDP 197 (389)
T ss_dssp EEEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHT---TSCTTCEEEEEC
T ss_pred ceEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHH---hhCCCCeEEEEC
Confidence 4456667654322444 4467788999999999999887766666666664 344445566665
No 393
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=29.01 E-value=1.9e+02 Score=23.65 Aligned_cols=72 Identities=10% Similarity=0.093 Sum_probs=42.4
Q ss_pred HHHHhcCCcEEEEE----cCChh-HHHHHhccCCCCcEEEEcCcHH--HHHHhcccCCcEEEEecCCCCHHHHHHHHHHH
Q 008172 465 DMANNLGVDAIFVY----TKHGH-MASLLSRNRPNPPIFAFTNDDS--TRMALNLQWGVIPVLVNLSDDMETNIAKTIDL 537 (575)
Q Consensus 465 ~~a~~~~AkaIVVf----T~SG~-TAr~VSr~RP~~PIiAvT~~~~--~aR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~ 537 (575)
+...+...+.|++- ..+|. ..+.+.+..|..||+++|.... ...+. +..|+.-++.++. +.++. ..++..
T Consensus 43 ~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~-~~~ga~~~l~Kp~-~~~~L-~~~i~~ 119 (133)
T 3b2n_A 43 KLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKA-VVNDVDAYVLKER-SIEEL-VETINK 119 (133)
T ss_dssp HHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHH-HHTTCSEEEETTS-CHHHH-HHHHHH
T ss_pred HHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCCCHHHHHHH-HHcCCcEEEECCC-CHHHH-HHHHHH
Confidence 33344466766653 23454 4566666778999999986543 33333 5678888887654 34443 334443
Q ss_pred HH
Q 008172 538 IK 539 (575)
Q Consensus 538 ~~ 539 (575)
+.
T Consensus 120 ~~ 121 (133)
T 3b2n_A 120 VN 121 (133)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 394
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=28.94 E-value=1.3e+02 Score=30.73 Aligned_cols=56 Identities=9% Similarity=0.063 Sum_probs=33.9
Q ss_pred CCCHHHHHHHHHcCCcEEEeeCCCCCH-------HHHHHHHHHHHHHhhh-cCCceEEEEeCCC
Q 008172 101 CCSMEDLEKLAMGGMNVARLNMCHNTR-------EWHLDVIRKIKQLNHE-KLFCISVMIDTEG 156 (575)
Q Consensus 101 s~~~e~l~~li~~G~~v~RlN~SHg~~-------e~~~~~i~~ir~~~~~-~~~~i~Il~Dl~G 156 (575)
..+.+.++.|-+.|+|++||-++.... ......++.++++-+. ...-+.+++|+-.
T Consensus 62 ~~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vildlH~ 125 (376)
T 3ayr_A 62 KTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNLHH 125 (376)
T ss_dssp CCCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred cCcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 347899999999999999998865310 0112223333333211 1234678889864
No 395
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=28.73 E-value=46 Score=34.62 Aligned_cols=46 Identities=15% Similarity=0.313 Sum_probs=36.2
Q ss_pred EecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHH
Q 008172 95 CTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQL 140 (575)
Q Consensus 95 ~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~ 140 (575)
+.+|-.....+.++.++++|++++=++.+||..+...+.++.+|+.
T Consensus 93 ~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~ 138 (361)
T 3r2g_A 93 VSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQL 138 (361)
T ss_dssp EEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHh
Confidence 4455434457899999999999999999999887666777777754
No 396
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=28.66 E-value=2.4e+02 Score=27.72 Aligned_cols=136 Identities=10% Similarity=0.173 Sum_probs=70.6
Q ss_pred HHHHHcCCCEEEecCcCChhhHHHHHHHHhcc---CCCC--ceEEeeecCHH--HH--------------hcHHHHHhc-
Q 008172 272 EFGIAEGVDFIAMSFVCDADSVRHLKKYVSGK---SSRS--IKVLAKIENLE--SL--------------QKFEEIVEA- 329 (575)
Q Consensus 272 ~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~---~~~~--i~IIaKIEt~~--av--------------~nldeI~~~- 329 (575)
+.+.+.|+|++.+.=.--.+-++.+++.+.+. |... +..+..+-+.. .+ .++-.....
T Consensus 77 ~~~~~~gad~vTVh~~~G~~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~ 156 (259)
T 3tfx_A 77 KALAKLGITFTTVHALGGSQMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHS 156 (259)
T ss_dssp HHHHTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHh
Confidence 44567899999886655566677777766532 2112 33344554431 12 122222222
Q ss_pred -CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhh------HHHHHHcccceE
Q 008172 330 -SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVAD------VSEAVRQYADAL 402 (575)
Q Consensus 330 -sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~D------v~nav~~G~D~v 402 (575)
.||+... .+++..+.+ ..|.-.++-|.=. +|.-+...| ...++..|+|.+
T Consensus 157 G~dGvV~s---------~~e~~~ir~-------~~~~~f~~vtPGI-------r~~g~~~gDQ~Rv~T~~~a~~aGad~i 213 (259)
T 3tfx_A 157 GADGVICS---------PLEVKKLHE-------NIGDDFLYVTPGI-------RPAGNAKDDQSRVATPKMAKEWGSSAI 213 (259)
T ss_dssp TCCEEECC---------GGGHHHHHH-------HHCSSSEEEECCC-------CCC-----------CHHHHHHTTCSEE
T ss_pred CCCEEEEC---------HHHHHHHHh-------hcCCccEEEcCCc-------CCCCCCcCCccccCCHHHHHHcCCCEE
Confidence 4666552 222222211 1233222212111 676666666 667899999998
Q ss_pred EeccCcCCCCCHHHHHHHHHHHHHHHhh
Q 008172 403 MLSGESAIGPFGQKAVSVLQMASSRMEL 430 (575)
Q Consensus 403 mLs~ETa~G~yPveaV~~m~~I~~~aE~ 430 (575)
....--.....|.++++.+++...++..
T Consensus 214 VvGr~I~~a~dp~~a~~~i~~~~~~~~~ 241 (259)
T 3tfx_A 214 VVGRPITLASDPKAAYEAIKKEFNAENL 241 (259)
T ss_dssp EECHHHHTSSSHHHHHHHHHHHHTCTTC
T ss_pred EEChHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 8865555567899998877765433333
No 397
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=28.49 E-value=1.4e+02 Score=25.01 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=39.3
Q ss_pred CCCeEEEEecCCCCceEEe-cCCEEEEEeeccCCCCCcEEEecccccc-cccCCCCEEEE
Q 008172 155 EGSQIHVVDHGEPNSVKVE-EDSIWLFTAIKFEGSRPFTVKANYAGFS-EGIEVGDELVI 212 (575)
Q Consensus 155 ~GpkIRtG~~~~~~~i~l~-~G~~v~lt~~~~~~~~~~~i~v~~~~l~-~~v~~Gd~Ili 212 (575)
.|..+|+|-+-.+.++.-. .|..++|...+.+. ....++|.|..++ ...+.|.-|..
T Consensus 7 ~~~~iRvgG~V~~GSv~r~~~~~~v~F~vtD~~~-~~~~v~V~Y~GilPDlFrEGqgVV~ 65 (94)
T 2kct_A 7 KLHTVRLFGTVAADGLTMLDGAPGVRFRLEDKDN-TSKTVWVLYKGAVPDTFKPGVEVII 65 (94)
T ss_dssp TTCCEEEEEEECSTTCEECTTSSEEEEEEECSSC-TTCEEEEEEESCCCTTCCTTCEEEE
T ss_pred CCCeEEEeeEEeCCeEEecCCCCEEEEEEEcCCC-CCcEEEEEECCCCCccccCCCeEEE
Confidence 6789999987544556554 47888887655422 1357999888644 66778887776
No 398
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=28.49 E-value=4.2e+02 Score=26.15 Aligned_cols=108 Identities=14% Similarity=0.154 Sum_probs=72.9
Q ss_pred cCHHHHHHH-HHcCCCEEEe-----cCcCChhhHHHHHHHHhccCCCCceEEeee---cCHHHHhcHHHHHhc-CCEEEE
Q 008172 266 KDWDDIEFG-IAEGVDFIAM-----SFVCDADSVRHLKKYVSGKSSRSIKVLAKI---ENLESLQKFEEIVEA-SDGIMV 335 (575)
Q Consensus 266 kD~~di~~a-l~~gvd~I~~-----SfV~sa~dv~~ir~~l~~~~~~~i~IIaKI---Et~~av~nldeI~~~-sDgImI 335 (575)
.|...+..+ .+.|+++|-+ -|=.+.++++++|+.. ++.|+.|= ... .+++.... +|+|++
T Consensus 79 ~dp~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v------~lPVl~Kdfi~d~~----qi~ea~~~GAD~VlL 148 (272)
T 3tsm_A 79 FDPPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQAC------SLPALRKDFLFDPY----QVYEARSWGADCILI 148 (272)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTS------SSCEEEESCCCSTH----HHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhc------CCCEEECCccCCHH----HHHHHHHcCCCEEEE
Confidence 466655544 4689999987 3557999999998754 35566551 111 35555555 999999
Q ss_pred eCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEec
Q 008172 336 ARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLS 405 (575)
Q Consensus 336 aRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs 405 (575)
.-.+| + +.--+.+++.|+..|.-+++-++ +.+| +..|...|+|.+-.+
T Consensus 149 i~a~L----~----~~~l~~l~~~a~~lGl~~lvevh-----------~~eE---l~~A~~~ga~iIGin 196 (272)
T 3tsm_A 149 IMASV----D----DDLAKELEDTAFALGMDALIEVH-----------DEAE---MERALKLSSRLLGVN 196 (272)
T ss_dssp ETTTS----C----HHHHHHHHHHHHHTTCEEEEEEC-----------SHHH---HHHHTTSCCSEEEEE
T ss_pred ccccc----C----HHHHHHHHHHHHHcCCeEEEEeC-----------CHHH---HHHHHhcCCCEEEEC
Confidence 86665 1 23456888999999998887543 3333 456778999987665
No 399
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=28.48 E-value=1.6e+02 Score=29.05 Aligned_cols=127 Identities=21% Similarity=0.243 Sum_probs=68.2
Q ss_pred cccCCCCCc-cCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHh-cHHHHHhc-----
Q 008172 257 NHGLPTLSK-KDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQ-KFEEIVEA----- 329 (575)
Q Consensus 257 ~~~lp~lse-kD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~-nldeI~~~----- 329 (575)
...+|.+|+ -|...+.+..+. +|++-++= ++.++..-+++ +.+.+ ..|+-|= |.. +++|+..+
T Consensus 85 ~~Gl~~~te~~d~~~~~~l~~~-vd~~kIga-~~~~n~~ll~~-~a~~~---kPV~lk~----G~~~t~~e~~~Av~~i~ 154 (262)
T 1zco_A 85 EYGLVTVTEVMDTRHVELVAKY-SDILQIGA-RNSQNFELLKE-VGKVE---NPVLLKR----GMGNTIQELLYSAEYIM 154 (262)
T ss_dssp HHTCEEEEECCCGGGHHHHHHH-CSEEEECG-GGTTCHHHHHH-HTTSS---SCEEEEC----CTTCCHHHHHHHHHHHH
T ss_pred HcCCcEEEeeCCHHhHHHHHhh-CCEEEECc-ccccCHHHHHH-HHhcC---CcEEEec----CCCCCHHHHHHHHHHHH
Confidence 345666655 477888898898 99988763 23333333333 33333 2344432 443 44444443
Q ss_pred ----CCEEEEeCCCCCC-CCCCCChH-HHHHHHHHHHHHcCCCEEE-ehhhHHhhhcCCCCChhhHhhHH-HHHHcccce
Q 008172 330 ----SDGIMVARGDLGV-DIPLEQIP-TVQEIIIHVCRQLNKPVIV-ASQLLESMVEYPTPTRAEVADVS-EAVRQYADA 401 (575)
Q Consensus 330 ----sDgImIaRGDLg~-e~~~e~v~-~~Qk~Ii~~c~~~gKPviv-aTq~LeSM~~~p~PtrAEv~Dv~-nav~~G~D~ 401 (575)
-|.+++-||--.. .++.+.+. .+... ..+..|-||++ +|+- ...|.=+..++ .|+..|+|+
T Consensus 155 ~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~---lk~~~~~pVi~d~sH~--------~g~~~~v~~~~~aAva~Ga~G 223 (262)
T 1zco_A 155 AQGNENVILCERGIRTFETATRFTLDISAVPV---VKELSHLPIIVDPSHP--------AGRRSLVIPLAKAAYAIGADG 223 (262)
T ss_dssp TTTCCCEEEEECCBCCSCCSSSSBCCTTHHHH---HHHHBSSCEEECSSTT--------TCSGGGHHHHHHHHHHTTCSE
T ss_pred HCCCCeEEEEECCCCCCCCcChhhcCHHHHHH---HHhhhCCCEEEEcCCC--------CCccchHHHHHHHHHHcCCCE
Confidence 3889999983332 45555333 11111 22344899944 3332 11222122222 388999999
Q ss_pred EEe
Q 008172 402 LML 404 (575)
Q Consensus 402 vmL 404 (575)
+|+
T Consensus 224 l~i 226 (262)
T 1zco_A 224 IMV 226 (262)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 400
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=28.47 E-value=2.1e+02 Score=22.37 Aligned_cols=60 Identities=13% Similarity=0.133 Sum_probs=38.9
Q ss_pred HHHHhcCCcEEEEEc----CChh-HHHHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecCCC
Q 008172 465 DMANNLGVDAIFVYT----KHGH-MASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSD 525 (575)
Q Consensus 465 ~~a~~~~AkaIVVfT----~SG~-TAr~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~~ 525 (575)
+...+...+.+++-. .+|. ..+.+.+..|..||+.+|...... .-.+..|+.-++.++..
T Consensus 39 ~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~-~~~~~~g~~~~l~Kp~~ 103 (116)
T 3a10_A 39 KKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAYSHYR-SDMSSWAADEYVVKSFN 103 (116)
T ss_dssp HHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCGGGG-GCGGGGGSSEEEECCSS
T ss_pred HHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECCcchH-HHHHhccccceEECCCC
Confidence 344455677666532 3454 456666667899999999876654 34456788888776553
No 401
>1i8d_A Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} SCOP: b.43.4.3 b.43.4.3 PDB: 1hze_A* 1i18_A* 1pkv_A*
Probab=28.41 E-value=79 Score=30.52 Aligned_cols=55 Identities=18% Similarity=0.269 Sum_probs=41.6
Q ss_pred EEeccc-ccccccCCCCEEEEeCCeeEEEEEEEECCeEEEEEec-------CeEecCCccccccc
Q 008172 193 VKANYA-GFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTD-------PGVFLPRAKLSFRR 249 (575)
Q Consensus 193 i~v~~~-~l~~~v~~Gd~IliDDG~i~l~V~~~~~~~i~~~V~~-------gG~l~s~K~vn~~r 249 (575)
+.+..+ .+.+.+..||.|-+|. +.|.|.++.++.+.+-+.. =|.+.....||+.|
T Consensus 24 l~i~~~~~~~~~l~~g~SIAvnG--vcLTV~~v~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLEr 86 (213)
T 1i8d_A 24 HVVELPDHMLDGLETGASVAHNG--CCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVER 86 (213)
T ss_dssp EEEECCGGGTTTCCTTCEEEETT--EEEEEEEEETTEEEEEEEHHHHHHSGGGGCCTTCEEEEEE
T ss_pred EEEEEChHHhccCCCCcEEEECC--EEeeEEEEcCCEEEEEEeHHHHhhcccccCCCCCEEEeCc
Confidence 344333 5678999999999987 8999999999988877653 36676666777754
No 402
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=28.39 E-value=4.6e+02 Score=26.19 Aligned_cols=129 Identities=16% Similarity=0.127 Sum_probs=0.0
Q ss_pred CCccCHHHHHHHHHcCCCEEEecC-------------cCChhhHHHHHHHHhccCCCCceEEeeecC-------HHHHhc
Q 008172 263 LSKKDWDDIEFGIAEGVDFIAMSF-------------VCDADSVRHLKKYVSGKSSRSIKVLAKIEN-------LESLQK 322 (575)
Q Consensus 263 lsekD~~di~~al~~gvd~I~~Sf-------------V~sa~dv~~ir~~l~~~~~~~i~IIaKIEt-------~~av~n 322 (575)
+|--|.---+.+-+.|+|.|.+.. -=+.+++...-+.+.+.. +...|++=++- .++++|
T Consensus 39 ~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~-~~~~vvaD~pfgsy~~s~~~a~~n 117 (281)
T 1oy0_A 39 LTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGA-PHALVVADLPFGSYEAGPTAALAA 117 (281)
T ss_dssp EECCSHHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHC-TTSEEEEECCTTSSTTCHHHHHHH
T ss_pred EeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcC-CCCeEEEECCCCcccCCHHHHHHH
Q ss_pred HHHHHhc--CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEE-------EehhhHHhhhcCCCCChhh--HhhH
Q 008172 323 FEEIVEA--SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVI-------VASQLLESMVEYPTPTRAE--VADV 391 (575)
Q Consensus 323 ldeI~~~--sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvi-------vaTq~LeSM~~~p~PtrAE--v~Dv 391 (575)
.-.+++. +++|-+-=| ..+...|+++.++|.||+ -..+.+....-..+..+++ +.|.
T Consensus 118 a~rl~~eaGa~aVklEdg------------~e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA 185 (281)
T 1oy0_A 118 ATRFLKDGGAHAVKLEGG------------ERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADA 185 (281)
T ss_dssp HHHHHHTTCCSEEEEEBS------------GGGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEECCc------------HHHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHH
Q ss_pred HHHHHcccceEEe
Q 008172 392 SEAVRQYADALML 404 (575)
Q Consensus 392 ~nav~~G~D~vmL 404 (575)
-.....|+|+++|
T Consensus 186 ~a~~eAGA~~ivl 198 (281)
T 1oy0_A 186 IAVAEAGAFAVVM 198 (281)
T ss_dssp HHHHHHTCSEEEE
T ss_pred HHHHHcCCcEEEE
No 403
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=28.34 E-value=38 Score=33.54 Aligned_cols=66 Identities=20% Similarity=0.245 Sum_probs=44.4
Q ss_pred HHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEE-eeecCHHHHh--------cHHHHHhc-CCEEEEeCCCCC
Q 008172 272 EFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVL-AKIENLESLQ--------KFEEIVEA-SDGIMVARGDLG 341 (575)
Q Consensus 272 ~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~II-aKIEt~~av~--------nldeI~~~-sDgImIaRGDLg 341 (575)
+.+.+.|.|++.+| +.++..+|+.+. ++..++ .=|-- ++-+ +..+.++. +|.+.+||+=++
T Consensus 169 ~~a~~aG~~GvV~s----a~e~~~iR~~~g----~~fl~VtPGIr~-qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~ 239 (255)
T 3ldv_A 169 TLTKNAGLDGVVCS----AQEASLLKQHLG----REFKLVTPGIRP-AGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQ 239 (255)
T ss_dssp HHHHHTTCSEEECC----HHHHHHHHHHHC----TTSEEEEECCCC-TTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHT
T ss_pred HHHHHcCCCEEEEC----HHHHHHHHHhcC----CCcEEEeCCccc-CcCCccceeccCCHHHHHHcCCCEEEECHHHhC
Confidence 44568899999776 889999998773 333433 55532 2322 46666666 999999998766
Q ss_pred CCCCC
Q 008172 342 VDIPL 346 (575)
Q Consensus 342 ~e~~~ 346 (575)
.+=|.
T Consensus 240 a~dp~ 244 (255)
T 3ldv_A 240 AAHPE 244 (255)
T ss_dssp CSCHH
T ss_pred CCCHH
Confidence 55443
No 404
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=28.28 E-value=1.4e+02 Score=30.94 Aligned_cols=64 Identities=9% Similarity=0.095 Sum_probs=41.0
Q ss_pred CCceEEEec-CCCCCCHHHH-----HHHHHcCCcEEEeeCCCC------CHHHHHHHHHHHHHHhhhcCCceEEEEeCC
Q 008172 89 RKTKMVCTI-GPACCSMEDL-----EKLAMGGMNVARLNMCHN------TREWHLDVIRKIKQLNHEKLFCISVMIDTE 155 (575)
Q Consensus 89 r~tkIi~Ti-GPas~~~e~l-----~~li~~G~~v~RlN~SHg------~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~ 155 (575)
.+...-+|+ |.-..++|.+ +++.+.|.+.+.+..... +.++-.++++.+|+ ..|..+.|++|..
T Consensus 124 ~~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~---a~g~~~~l~vDaN 199 (393)
T 4dwd_A 124 TRLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRE---LLGPDAVIGFDAN 199 (393)
T ss_dssp SEEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHH---HHCTTCCEEEECT
T ss_pred CceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHH---HhCCCCeEEEECC
Confidence 356677887 4433456655 666788999999998653 45555556666654 3444456666653
No 405
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=28.20 E-value=1.9e+02 Score=30.63 Aligned_cols=124 Identities=9% Similarity=0.023 Sum_probs=71.2
Q ss_pred HHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhh
Q 008172 354 EIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSR 433 (575)
Q Consensus 354 k~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 433 (575)
.-+...|+..|.|+.+- .|..+....+...-..|++.+....+. .| -++++...++.++.+.+
T Consensus 188 ~AlA~aAa~~Gl~~~Iv-----------mP~~~s~~k~~~~r~~GAeVv~v~~~~---~~-~~a~~~a~el~~~~~~~-- 250 (430)
T 4aec_A 188 IGLAFIAASRGYRLILT-----------MPASMSMERRVLLKAFGAELVLTDPAK---GM-TGAVQKAEEILKNTPDA-- 250 (430)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTE--
T ss_pred HHHHHHHHHhCCEEEEE-----------EcCCCCHHHHHHHHHCCCEEEEECCCC---Ch-HHHHHHHHHHHHhcCCc--
Confidence 34566799999999874 243333445556667899988775331 22 24444333332221111
Q ss_pred hhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhc--CCcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCcH
Q 008172 434 EENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNL--GVDAIFVYTKHGHMASLLSR----NRPNPPIFAFTNDD 504 (575)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~--~AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~~ 504 (575)
+ ...+.. .+..+..-....+.|+.+++ ..++||+..-+|.|+--+++ ..|.+.||++.+..
T Consensus 251 -------~-~i~~~~--np~~~~aG~~T~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~ 317 (430)
T 4aec_A 251 -------Y-MLQQFD--NPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTE 317 (430)
T ss_dssp -------E-ECCTTT--CTHHHHHHHHTHHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred -------E-EecCCC--CccHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCC
Confidence 1 111111 11111122334456777776 36899999999998766655 48999999997654
No 406
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=28.03 E-value=50 Score=32.26 Aligned_cols=147 Identities=18% Similarity=0.106 Sum_probs=83.3
Q ss_pred CCCCccCHHH-HHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHH-------hc-CC
Q 008172 261 PTLSKKDWDD-IEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIV-------EA-SD 331 (575)
Q Consensus 261 p~lsekD~~d-i~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~-------~~-sD 331 (575)
|..|+.|++. +..|.++|++.|++ ++..+..++ .+.. ..++|.+=|=-|.|-...+.-+ +. +|
T Consensus 24 p~~t~~~i~~lc~eA~~~~~~aVcV----~p~~v~~a~-~l~~---~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAd 95 (231)
T 3ndo_A 24 PEATPSDVTALVDEAADLGVFAVCV----SPPLVSVAA-GVAP---SGLAIAAVAGFPSGKHVPGIKATEAELAVAAGAT 95 (231)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEE----CGGGHHHHH-HHCC---TTCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCS
T ss_pred CCCCHHHHHHHHHHHHHhCCcEEEE----CHHHHHHHH-HhcC---CCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCC
Confidence 6677777644 47788999999988 466777777 6632 3466666564444433222221 11 55
Q ss_pred EEEEeCCCCCCCCCC---CChHHHHH---HHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEe
Q 008172 332 GIMVARGDLGVDIPL---EQIPTVQE---IIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALML 404 (575)
Q Consensus 332 gImIaRGDLg~e~~~---e~v~~~Qk---~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmL 404 (575)
.|=+ -+.++. .+...+.+ .+.++|...--.||+-|-.|+. ..|..|+..... +...|+|.|=-
T Consensus 96 EIDm-----Vinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~-----~~t~eei~~a~~ia~~aGADfVKT 165 (231)
T 3ndo_A 96 EIDM-----VIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLE-----FSGEPLLADVCRVARDAGADFVKT 165 (231)
T ss_dssp EEEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHH-----HTCHHHHHHHHHHHHHTTCSEEEC
T ss_pred EEEE-----EeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCC-----CCCHHHHHHHHHHHHHHCcCEEEc
Confidence 5532 123332 23333444 4444553222245666665521 247788877776 66789999976
Q ss_pred ccCcC-CCCCHHHHHHHHHHHH
Q 008172 405 SGESA-IGPFGQKAVSVLQMAS 425 (575)
Q Consensus 405 s~ETa-~G~yPveaV~~m~~I~ 425 (575)
|.=-. .|---+|.|+.|++.+
T Consensus 166 STGf~~~~gAt~edv~lm~~~v 187 (231)
T 3ndo_A 166 STGFHPSGGASVQAVEIMARTV 187 (231)
T ss_dssp CCSCCTTCSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHh
Confidence 52111 2223368999998774
No 407
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=28.01 E-value=25 Score=36.77 Aligned_cols=35 Identities=26% Similarity=0.269 Sum_probs=30.4
Q ss_pred hcCCcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCc
Q 008172 469 NLGVDAIFVYTKHGHMASLLSR----NRPNPPIFAFTND 503 (575)
Q Consensus 469 ~~~AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~ 503 (575)
+..|+.+||-|.||+||-.+|- ..|..+.+.+||=
T Consensus 244 ~~~aDGlIVSTPTGSTAYslSAGGPIv~P~~~~i~ltPI 282 (365)
T 3pfn_A 244 TVQGDGVIVSTPTGSTAYAAAAGASMIHPNVPAIMITPI 282 (365)
T ss_dssp EECSSEEEEECGGGGGTHHHHTTCCEECTTSCCEEEEEE
T ss_pred EEecCeEEEeCCccHHHHHHhCCCCccCCCCCeEEEEec
Confidence 5679999999999999999997 4888888888753
No 408
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=27.91 E-value=2.7e+02 Score=27.39 Aligned_cols=124 Identities=9% Similarity=0.018 Sum_probs=70.5
Q ss_pred HHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhh
Q 008172 355 IIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSRE 434 (575)
Q Consensus 355 ~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 434 (575)
-+...|+..|.++++-. |..+.-..+...-..|++.+...++. .| -++.+...++.++-..+
T Consensus 76 a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~~~~~~~~~--- 137 (316)
T 1y7l_A 76 ALAYVAAARGYKITLTM-----------PETMSLERKRLLCGLGVNLVLTEGAK---GM-KGAIAKAEEIVASDPSR--- 137 (316)
T ss_dssp HHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTT---
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCC---
Confidence 46677899999998742 32222334555667899987765431 13 34554444332221110
Q ss_pred hhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcC--CcEEEEEcCChhHHHHHhc----cC-CCCcEEEEcCcH
Q 008172 435 ENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLG--VDAIFVYTKHGHMASLLSR----NR-PNPPIFAFTNDD 504 (575)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--AkaIVVfT~SG~TAr~VSr----~R-P~~PIiAvT~~~ 504 (575)
| + ..++.. .+..+..-....+.++.++++ .+.||+.+-+|.++--+++ +. |...|+++.+..
T Consensus 138 ---~--~-~~~~~~--n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~ 206 (316)
T 1y7l_A 138 ---Y--V-MLKQFE--NPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVE 206 (316)
T ss_dssp ---E--E-CCCTTT--CTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETT
T ss_pred ---E--E-ECCCCC--CHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCC
Confidence 0 1 111111 111111112334567777775 5899999999998776665 35 999999998754
No 409
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=27.89 E-value=2e+02 Score=29.36 Aligned_cols=23 Identities=13% Similarity=0.296 Sum_probs=18.8
Q ss_pred CCCccCHHHH--------HHHHHcCCCEEEe
Q 008172 262 TLSKKDWDDI--------EFGIAEGVDFIAM 284 (575)
Q Consensus 262 ~lsekD~~di--------~~al~~gvd~I~~ 284 (575)
.||..|++.+ ++|.+.|+|+|=+
T Consensus 141 ~mt~~eI~~ii~~F~~AA~rA~~AGFDgVEI 171 (358)
T 4a3u_A 141 ALRLDEIPRLLDDYEKAARHALKAGFDGVQI 171 (358)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCeEee
Confidence 5788887776 5788999999976
No 410
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=27.87 E-value=3.1e+02 Score=26.65 Aligned_cols=143 Identities=15% Similarity=0.110 Sum_probs=80.0
Q ss_pred CCCccC-HHHHHHHHHcC-CCEEEecCcCChhhHHHHHHHHhccCCCCceEEeee----cCHHHHhcHHHHHh----c-C
Q 008172 262 TLSKKD-WDDIEFGIAEG-VDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKI----ENLESLQKFEEIVE----A-S 330 (575)
Q Consensus 262 ~lsekD-~~di~~al~~g-vd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKI----Et~~av~nldeI~~----~-s 330 (575)
..++.+ .+.++.+++.| +|+|=+-.-... .+.++.+..... +++||+-- +|+. .+.+.+++. . +
T Consensus 96 ~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~~~---~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~~ga 170 (257)
T 2yr1_A 96 PLNEAEVRRLIEAICRSGAIDLVDYELAYGE-RIADVRRMTEEC---SVWLVVSRHYFDGTPR-KETLLADMRQAERYGA 170 (257)
T ss_dssp SSCHHHHHHHHHHHHHHTCCSEEEEEGGGTT-HHHHHHHHHHHT---TCEEEEEEEESSCCCC-HHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHcCCCCEEEEECCCCh-hHHHHHHHHHhC---CCEEEEEecCCCCCcC-HHHHHHHHHHHHhcCC
Confidence 445554 45667889998 999998874433 555555544433 35666654 3442 334444443 3 5
Q ss_pred CEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEE--eccCc
Q 008172 331 DGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALM--LSGES 408 (575)
Q Consensus 331 DgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vm--Ls~ET 408 (575)
|.+=|+. +.-..+++..+.+-.-+......+|+|.- ||=.....||. .+.+. |.-... |...+
T Consensus 171 DivKia~----~a~s~~D~l~ll~~~~~~~~~~~~P~I~~-----~MG~~G~~SRi-----~~~~~-GS~~Tf~~l~~~s 235 (257)
T 2yr1_A 171 DIAKVAV----MPKSPEDVLVLLQATEEARRELAIPLITM-----AMGGLGAITRL-----AGWLF-GSAVTFAVGNQSS 235 (257)
T ss_dssp SEEEEEE----CCSSHHHHHHHHHHHHHHHHHCSSCEEEE-----ECTTTTHHHHH-----HGGGG-TBCEEECBSSSCS
T ss_pred CEEEEEe----ccCCHHHHHHHHHHHHHHhccCCCCEEEE-----ECCCCcchHHH-----HHHHh-CCceEecCCCCCC
Confidence 8877761 11123455555554333323347899863 45555555554 55543 333333 56778
Q ss_pred CCCCCHHHHHHHHHHH
Q 008172 409 AIGPFGQKAVSVLQMA 424 (575)
Q Consensus 409 a~G~yPveaV~~m~~I 424 (575)
|-|..+++-++.+-++
T Consensus 236 APGQl~~~el~~~l~~ 251 (257)
T 2yr1_A 236 APGQIPIDDVRTVLSI 251 (257)
T ss_dssp STTCCBHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHH
Confidence 9999987766644433
No 411
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=27.79 E-value=2.5e+02 Score=26.76 Aligned_cols=80 Identities=13% Similarity=0.105 Sum_probs=49.0
Q ss_pred HHHhcCCcEEEEEcCC---------hhHHHHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecCCC--CHHHHHHHH
Q 008172 466 MANNLGVDAIFVYTKH---------GHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSD--DMETNIAKT 534 (575)
Q Consensus 466 ~a~~~~AkaIVVfT~S---------G~TAr~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~~--d~d~~i~~a 534 (575)
.+.+.+++.||+-+.. |+++..+.+.-| |||+.+-+.... ......+++.+.. .....++.|
T Consensus 118 ~a~~~~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~-~PVlvv~~~~~~------~~~~~~Ilv~~d~s~~s~~al~~a 190 (294)
T 3loq_A 118 IKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSK-VPVYIFKHDMVV------NSLFDRVLVAYDFSKWADRALEYA 190 (294)
T ss_dssp HHHHTTSSEEEEECCCCCHHHHHHHCCHHHHHHHHCS-SCEEEECCCTTT------TCTTSEEEEECCSSHHHHHHHHHH
T ss_pred eeccCCCCEEEEcCCCCccccceeeccHHHHHHhcCC-CCEEEecCcccc------CccCCEEEEEECCCHHHHHHHHHH
Confidence 7788899988887652 456777887777 999999765431 1233445554432 233446666
Q ss_pred HHHHHHcCCCCCCCEEEEEecCC
Q 008172 535 IDLIKMKGMVKYGDAVLVVLDLT 557 (575)
Q Consensus 535 l~~~~~~g~~k~GD~VVvv~G~~ 557 (575)
...+.. .|..+.++.-++
T Consensus 191 ~~la~~-----~~~~l~ll~v~~ 208 (294)
T 3loq_A 191 KFVVKK-----TGGELHIIHVSE 208 (294)
T ss_dssp HHHHHH-----HTCEEEEEEECS
T ss_pred HHHhhh-----cCCEEEEEEEcc
Confidence 666554 345566665444
No 412
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=27.73 E-value=47 Score=32.78 Aligned_cols=66 Identities=14% Similarity=0.114 Sum_probs=0.0
Q ss_pred cCHHHHHHHHHc-CCCEEEecCcC---ChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc---CCEEEEe
Q 008172 266 KDWDDIEFGIAE-GVDFIAMSFVC---DADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA---SDGIMVA 336 (575)
Q Consensus 266 kD~~di~~al~~-gvd~I~~SfV~---sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~---sDgImIa 336 (575)
.+.++++.|++. |+|+|.+..-+ ..-|+....+++.... .+..+|+ |+ |+.+-+++... +||++||
T Consensus 158 ~~~eE~~~A~~l~g~~iIGinnr~l~t~~~d~~~~~~l~~~ip-~~~~vIa--Es--GI~t~edv~~~~~~a~avLVG 230 (251)
T 1i4n_A 158 HSREDLEKVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPLVP-DDTVVVA--ES--GIKDPRELKDLRGKVNAVLVG 230 (251)
T ss_dssp CSHHHHHHHHTTCCCSEEEEECBCTTTCCBCTTHHHHHGGGSC-TTSEEEE--ES--CCCCGGGHHHHTTTCSEEEEC
T ss_pred CCHHHHHHHHhcCCCCEEEEeCcccccCCCCHHHHHHHHHhCC-CCCEEEE--eC--CCCCHHHHHHHHHhCCEEEEc
No 413
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=27.67 E-value=1.9e+02 Score=28.04 Aligned_cols=39 Identities=18% Similarity=0.096 Sum_probs=29.3
Q ss_pred cCHHHHHHHHHcCCCEEEecCcC----ChhhHHHHHHHHhccC
Q 008172 266 KDWDDIEFGIAEGVDFIAMSFVC----DADSVRHLKKYVSGKS 304 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~SfV~----sa~dv~~ir~~l~~~~ 304 (575)
.+.+.++++.+.|+|+|=+..-. ..+++.++++.+.+.|
T Consensus 37 ~~l~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~g 79 (309)
T 2hk0_A 37 KFGPYIEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNG 79 (309)
T ss_dssp CSHHHHHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcC
Confidence 45444889999999999886532 2267899999998776
No 414
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=27.57 E-value=73 Score=32.16 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=25.1
Q ss_pred CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccC
Q 008172 364 NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGE 407 (575)
Q Consensus 364 gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~E 407 (575)
+.|||....+- --.|+..++..|||+|++...
T Consensus 256 ~ipvia~GGI~------------~~~d~~kal~~GAd~V~igr~ 287 (332)
T 1vcf_A 256 HLPLVASGGVY------------TGTDGAKALALGADLLAVARP 287 (332)
T ss_dssp SSCEEEESSCC------------SHHHHHHHHHHTCSEEEECGG
T ss_pred CCeEEEECCCC------------CHHHHHHHHHhCCChHhhhHH
Confidence 69999876543 346889999999999999753
No 415
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=27.54 E-value=1.8e+02 Score=28.10 Aligned_cols=67 Identities=18% Similarity=0.269 Sum_probs=44.8
Q ss_pred hHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 292 SVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 292 dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
.++.+++.+.+.+ ..+.+-+--+... -+|++++++-.|.|+-+-.+ +.....+-+.|++.++|++.+
T Consensus 83 Ka~~~~~~l~~~n-p~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~r~~l~~~~~~~~~p~i~~ 149 (251)
T 1zud_1 83 KSQVSQQRLTQLN-PDIQLTALQQRLT-GEALKDAVARADVVLDCTDN----------MATRQEINAACVALNTPLITA 149 (251)
T ss_dssp HHHHHHHHHHHHC-TTSEEEEECSCCC-HHHHHHHHHHCSEEEECCSS----------HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHC-CCCEEEEEeccCC-HHHHHHHHhcCCEEEECCCC----------HHHHHHHHHHHHHhCCCEEEE
Confidence 3455555565554 4566555433322 25788888889999886322 245678889999999999875
No 416
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=27.50 E-value=2.5e+02 Score=28.22 Aligned_cols=124 Identities=13% Similarity=0.097 Sum_probs=71.0
Q ss_pred HHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhh
Q 008172 355 IIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSRE 434 (575)
Q Consensus 355 ~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 434 (575)
-+...|+..|.++++-. |..+....+...-..|++.+...++. .| -++.+...++.++...+
T Consensus 92 alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~--- 153 (343)
T 2pqm_A 92 ALCQAGAVFGYRVNIAM-----------PSTMSVERQMIMKAFGAELILTEGKK---GM-PGAIEEVNKMIKENPGK--- 153 (343)
T ss_dssp HHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTT---
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCCC---CH-HHHHHHHHHHHHhCCCc---
Confidence 46677899999999842 33233334555667899987765431 13 34554444333221110
Q ss_pred hhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcC--CcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCcHH
Q 008172 435 ENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLG--VDAIFVYTKHGHMASLLSR----NRPNPPIFAFTNDDS 505 (575)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~~~ 505 (575)
| + ...+.. .+.++..-....+ ++..+++ .+.||+.+-+|.++--+++ ..|...|+++.+...
T Consensus 154 ---y--~-~~~~~~--n~~n~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~ 221 (343)
T 2pqm_A 154 ---Y--F-VANQFG--NPDNTAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEES 221 (343)
T ss_dssp ---E--E-ECCTTT--CHHHHHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred ---E--E-ECCCCC--ChhHHHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 0 0 011110 1111111123344 7777775 6899999999998776654 479999999987654
No 417
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=27.44 E-value=2.4e+02 Score=28.75 Aligned_cols=120 Identities=13% Similarity=0.130 Sum_probs=68.2
Q ss_pred HHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhh
Q 008172 354 EIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSR 433 (575)
Q Consensus 354 k~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 433 (575)
.-+...|++.|.++++.. |..+....+...-..|++.+...+ .| -++.+...++.++-..+
T Consensus 106 ~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~Vv~v~~-----~~-~~a~~~a~~l~~~~~~~-- 166 (364)
T 4h27_A 106 MAAAYAARQLGVPATIVV-----------PGTTPALTIERLKNEGATVKVVGE-----LL-DEAFELAKALAKNNPGW-- 166 (364)
T ss_dssp HHHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHTTTCEEEEECS-----ST-THHHHHHHHHHHHSTTE--
T ss_pred HHHHHHHHHhCCceEEEE-----------CCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhCCCe--
Confidence 346677999999998741 333323344555568998766642 33 35555444443221011
Q ss_pred hhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcC--CcEEEEEcCChhHHHHHhc----cC-CCCcEEEEcCc
Q 008172 434 EENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLG--VDAIFVYTKHGHMASLLSR----NR-PNPPIFAFTND 503 (575)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--AkaIVVfT~SG~TAr~VSr----~R-P~~PIiAvT~~ 503 (575)
+ ...+.. . + .....-...+.++..+++ .+.||+.+=+|.|+--+++ +. |.++||+|-++
T Consensus 167 -------~-~~~~~~-n-p-~~~~G~~t~~~Ei~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~ 232 (364)
T 4h27_A 167 -------V-YIPPFD-D-P-LIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETF 232 (364)
T ss_dssp -------E-EECSSC-S-H-HHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEET
T ss_pred -------E-EeCCCC-C-H-HHHHHHHHHHHHHHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 0 111111 0 1 111222234567777774 6899999999998665544 33 88999999654
No 418
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=27.38 E-value=2.3e+02 Score=27.85 Aligned_cols=119 Identities=9% Similarity=0.022 Sum_probs=66.9
Q ss_pred HHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhh
Q 008172 355 IIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSRE 434 (575)
Q Consensus 355 ~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 434 (575)
-+...|+..|.++.+.. |....-..+...-..|++.+...+. | -++.+..+++.++-. +
T Consensus 79 alA~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~~~~~~~-~--- 137 (311)
T 1ve5_A 79 GVAYAAQVLGVKALVVM-----------PEDASPYKKACARAYGAEVVDRGVT-----A-KNREEVARALQEETG-Y--- 137 (311)
T ss_dssp HHHHHHHHHTCCEEEEC-----------CCC--CCHHHHHHHTTCEEECTTCC-----T-TTHHHHHHHHHHHHC-C---
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhcC-c---
Confidence 46677899999999742 2222222445566789987654332 3 245444444332211 0
Q ss_pred hhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhc-----CCcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCcH
Q 008172 435 ENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNL-----GVDAIFVYTKHGHMASLLSR----NRPNPPIFAFTNDD 504 (575)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~-----~AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~~ 504 (575)
+ ...+.. .+ .....-...+.++..++ +.+.||+.+-+|.|+--+++ ..|...|+++.+..
T Consensus 138 ------~-~~~~~~--n~-~~~~g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~ 206 (311)
T 1ve5_A 138 ------A-LIHPFD--DP-LVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEA 206 (311)
T ss_dssp ------E-ECCSSS--SH-HHHHHHHHHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred ------E-ecCCCC--Cc-chhhhccHHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCC
Confidence 0 111111 01 11122233345555555 46899999999998776654 47999999998864
No 419
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=27.21 E-value=1.6e+02 Score=28.48 Aligned_cols=88 Identities=13% Similarity=0.055 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------hhHHHHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecCCCC---
Q 008172 459 ICNCAVDMANNLGVDAIFVYTKH---------GHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDD--- 526 (575)
Q Consensus 459 ia~~av~~a~~~~AkaIVVfT~S---------G~TAr~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~~d--- 526 (575)
.+...++.|.+.++++||+-++. |.++..+.+.-| ||++.+-+... .....+++.+..+
T Consensus 99 ~~~~i~~~a~~~~~DLiV~G~~g~~~~~~~~~Gs~~~~vl~~~~-~PVlvv~~~~~--------~~~~~Ilva~D~s~~~ 169 (319)
T 3olq_A 99 PYEAIIEEVITDKHDLLIKMAHQHDKLGSLIFTPLDWQLLRKCP-APVWMVKDKEW--------PEYGTIVVAANLSNEE 169 (319)
T ss_dssp HHHHHHHHHHHHTCSEEEEEEBCC--CCSCBCCHHHHHHHHHCS-SCEEEEESSCC--------CTTCEEEEECCCSCCS
T ss_pred hHHHHHHHHHhcCCCEEEEecCcCchhhcccccccHHHHHhcCC-CCEEEecCccc--------ccCCeEEEEECCCCcc
Confidence 44455667778899998887653 678888887765 99999965531 1244556554322
Q ss_pred ------HHHHHHHHHHHHHHcCCCCCCCEEEEEecCCC
Q 008172 527 ------METNIAKTIDLIKMKGMVKYGDAVLVVLDLTP 558 (575)
Q Consensus 527 ------~d~~i~~al~~~~~~g~~k~GD~VVvv~G~~~ 558 (575)
....++.|...+... .+|..+.+++-++.
T Consensus 170 ~~~~~~s~~al~~a~~la~~~---~~~a~l~ll~v~~~ 204 (319)
T 3olq_A 170 SYHDALNLKLIELTNDLSHRI---QKDPDVHLLSAYPV 204 (319)
T ss_dssp THHHHHHHHHHHHHHHHHHHH---CSSCCEEEEEEECC
T ss_pred hhHHHHHHHHHHHHHHHHHhc---cCCCeEEEEEeecC
Confidence 255677777777764 12556666655443
No 420
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=27.15 E-value=1.4e+02 Score=28.24 Aligned_cols=36 Identities=17% Similarity=0.083 Sum_probs=28.3
Q ss_pred HHHHHHHHcCCCEEEecCcCC-h---hhHHHHHHHHhccC
Q 008172 269 DDIEFGIAEGVDFIAMSFVCD-A---DSVRHLKKYVSGKS 304 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~s-a---~dv~~ir~~l~~~~ 304 (575)
+.++.+.+.|+|+|=+..-.. . +++.++++.+++.|
T Consensus 21 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~g 60 (290)
T 2qul_A 21 ATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLG 60 (290)
T ss_dssp HHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcC
Confidence 567888899999998876432 2 67899999998876
No 421
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=26.93 E-value=1.6e+02 Score=29.12 Aligned_cols=72 Identities=17% Similarity=0.125 Sum_probs=41.1
Q ss_pred cCCCCEEEEeCC---eeEEEEEEEECCeEEEEEecCeEecCCcccccccCcccccccccCCCCCccCHHHHHHHHHcCCC
Q 008172 204 IEVGDELVIDGG---MASFEVIEKVGNDLRCKCTDPGVFLPRAKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVD 280 (575)
Q Consensus 204 v~~Gd~IliDDG---~i~l~V~~~~~~~i~~~V~~gG~l~s~K~vn~~r~g~~~~~~~~lp~lsekD~~di~~al~~gvd 280 (575)
+++||.|.+-|| ....+|.+++.+.+.+++...-...+.....+ ..-+.+|. .++--..|..|.+.||+
T Consensus 37 l~~Gd~i~l~dg~G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~v-------~L~~al~K-~~r~e~ilqkatELGV~ 108 (268)
T 1vhk_A 37 MNEGDQIICCSQDGFEAKCELQSVSKDKVSCLVIEWTNENRELPIKV-------YIASGLPK-GDKLEWIIQKGTELGAH 108 (268)
T ss_dssp CCTTCEEEEECTTSCEEEEEEEEECSSEEEEEEEEECCCCCCCSSEE-------EEEEECCS-TTHHHHHHHHHHHTTCC
T ss_pred CCCCCEEEEEeCCCCEEEEEEEEecCCEEEEEEEEEeccCCCCCccE-------EEEEeeec-CccHHHHHHHHHHhCcC
Confidence 468999998553 55677888888887777654211111000000 11223343 23334567789999999
Q ss_pred EEE
Q 008172 281 FIA 283 (575)
Q Consensus 281 ~I~ 283 (575)
-|.
T Consensus 109 ~I~ 111 (268)
T 1vhk_A 109 AFI 111 (268)
T ss_dssp EEE
T ss_pred EEE
Confidence 763
No 422
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=26.93 E-value=99 Score=32.32 Aligned_cols=96 Identities=21% Similarity=0.223 Sum_probs=48.4
Q ss_pred ChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEe-CCCCCCCCCCCChHHHHHHHHHHHHHcCCC
Q 008172 289 DADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVA-RGDLGVDIPLEQIPTVQEIIIHVCRQLNKP 366 (575)
Q Consensus 289 sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIa-RGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKP 366 (575)
+.++++++|+.. ...|+.|.= ...+......+. +|+|.|. +|-=....+.+.+ ..-.++.++.. ...|
T Consensus 240 ~~~~i~~lr~~~------~~PvivKgv--~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~-~~l~~v~~av~-~~ip 309 (392)
T 2nzl_A 240 SWEDIKWLRRLT------SLPIVAKGI--LRGDDAREAVKHGLNGILVSNHGARQLDGVPATI-DVLPEIVEAVE-GKVE 309 (392)
T ss_dssp CHHHHHHHC--C------CSCEEEEEE--CCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHH-HHHHHHHHHHT-TSSE
T ss_pred HHHHHHHHHHhh------CCCEEEEec--CCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChH-HHHHHHHHHcC-CCCE
Confidence 345555555432 246777721 112333333344 8999993 1110012222222 11122222211 2489
Q ss_pred EEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEecc
Q 008172 367 VIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSG 406 (575)
Q Consensus 367 vivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ 406 (575)
||....+- --.|+..++..|||+||+..
T Consensus 310 Via~GGI~------------~g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 310 VFLDGGVR------------KGTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp EEECSSCC------------SHHHHHHHHHTTCSEEEECH
T ss_pred EEEECCCC------------CHHHHHHHHHhCCCeeEECH
Confidence 98765433 34688999999999999964
No 423
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=26.80 E-value=2.4e+02 Score=27.83 Aligned_cols=84 Identities=11% Similarity=0.087 Sum_probs=53.6
Q ss_pred hcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccc
Q 008172 321 QKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYAD 400 (575)
Q Consensus 321 ~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D 400 (575)
++++++++.+|.++-. . .|..-...+..|.++|+|+++.|- -.+.++...+..+... =
T Consensus 65 ~dl~~ll~~~DVVIDf--------T---~p~a~~~~~~~al~~G~~vVigTT---------G~s~~~~~~L~~aa~~--~ 122 (272)
T 4f3y_A 65 DDIERVCAEADYLIDF--------T---LPEGTLVHLDAALRHDVKLVIGTT---------GFSEPQKAQLRAAGEK--I 122 (272)
T ss_dssp CCHHHHHHHCSEEEEC--------S---CHHHHHHHHHHHHHHTCEEEECCC---------CCCHHHHHHHHHHTTT--S
T ss_pred CCHHHHhcCCCEEEEc--------C---CHHHHHHHHHHHHHcCCCEEEECC---------CCCHHHHHHHHHHhcc--C
Confidence 5788888888987764 1 366667889999999999999762 2355555556555443 2
Q ss_pred eEEeccCcCCCCCHHHHHHHHHHHHHHHhhhh
Q 008172 401 ALMLSGESAIGPFGQKAVSVLQMASSRMELWS 432 (575)
Q Consensus 401 ~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~ 432 (575)
.++.+. +|-+-++ .|-++++.+-+++
T Consensus 123 ~vv~a~-----N~s~Gv~-l~~~~~~~aa~~l 148 (272)
T 4f3y_A 123 ALVFSA-----NMSVGVN-VTMKLLEFAAKQF 148 (272)
T ss_dssp EEEECS-----CCCHHHH-HHHHHHHHHHHHT
T ss_pred CEEEEC-----CCCHHHH-HHHHHHHHHHHhc
Confidence 356664 4444444 4444555554444
No 424
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=26.67 E-value=2.6e+02 Score=22.83 Aligned_cols=55 Identities=13% Similarity=0.208 Sum_probs=36.8
Q ss_pred hcCCcEEEEEcC----Chh-HHHHHhccCCCCcEEEEcCcHHH--HHHhcccCCcEEEEecCC
Q 008172 469 NLGVDAIFVYTK----HGH-MASLLSRNRPNPPIFAFTNDDST--RMALNLQWGVIPVLVNLS 524 (575)
Q Consensus 469 ~~~AkaIVVfT~----SG~-TAr~VSr~RP~~PIiAvT~~~~~--aR~L~L~~GV~Pvl~~~~ 524 (575)
....++|++-.. +|. ..+.+-+..|.+||+++|..... ..+ .+..|+.-++.+..
T Consensus 47 ~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~-~~~~g~~~~l~kp~ 108 (143)
T 3jte_A 47 CNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLDNAIL-AMKEGAFEYLRKPV 108 (143)
T ss_dssp TTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTCHHHHHH-HHHTTCSEEEESSC
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCCCHHHHHH-HHHhCcceeEeCCC
Confidence 346776766533 343 45666677899999999976543 333 36778888887654
No 425
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=26.65 E-value=2.1e+02 Score=28.18 Aligned_cols=123 Identities=13% Similarity=0.138 Sum_probs=66.4
Q ss_pred HHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhh
Q 008172 355 IIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSRE 434 (575)
Q Consensus 355 ~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 434 (575)
-+...|+..|.++.+-. |..+.-..+...-..|++.+...++. .| -++.+...++.++-..++
T Consensus 79 a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~l~~~~~~~~-- 141 (308)
T 2egu_A 79 GLAMVAAAKGYKAVLVM-----------PDTMSLERRNLLRAYGAELVLTPGAQ---GM-RGAIAKAEELVREHGYFM-- 141 (308)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ESCSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHHCCBC--
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHHHCcCCc--
Confidence 46778899999998741 22222234455567899987776431 13 355554444432211110
Q ss_pred hhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcC--CcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCcHH
Q 008172 435 ENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLG--VDAIFVYTKHGHMASLLSR----NRPNPPIFAFTNDDS 505 (575)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~~~ 505 (575)
..+.. .+..+..-....+.++..+++ .+.||+.+-+|.|+--+++ ..|...|+++.+...
T Consensus 142 ---------~~~~~--n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~ 207 (308)
T 2egu_A 142 ---------PQQFK--NEANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADS 207 (308)
T ss_dssp ---------C----------------CHHHHHHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-
T ss_pred ---------CCcCC--ChhHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCC
Confidence 01100 011111112223455555553 6899999999998766554 469999999976543
No 426
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=26.59 E-value=3.8e+02 Score=26.07 Aligned_cols=139 Identities=14% Similarity=0.121 Sum_probs=71.3
Q ss_pred eecCHHHHhcH-HHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhh
Q 008172 313 KIENLESLQKF-EEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVAD 390 (575)
Q Consensus 313 KIEt~~av~nl-deI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~D 390 (575)
-..+.+-++.+ ++..+. .+++.|- +..++.+-+.+ .|.++-++|-+ ..-..+.|+.+.+.+
T Consensus 38 p~~t~~~i~~lc~eA~~~~~~aVcV~---------p~~v~~a~~~L------~~s~v~v~tVi--gFP~G~~~~~~Kv~E 100 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYKFASVCVN---------PTWVPLCAELL------KGTGVKVCTVI--GFPLGATPSEVKAYE 100 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC---------GGGHHHHHHHH------TTSSCEEEEEE--STTTCCSCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC---------HHHHHHHHHHh------CCCCCeEEEEe--ccCCCCCchHHHHHH
Confidence 34555555443 222222 5777774 23334333322 24444444422 222344577778899
Q ss_pred HHHHHHcccceEEec---cCcCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHhhhcccccCCCCCCchhhHHHHHHHHHH
Q 008172 391 VSEAVRQYADALMLS---GESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMA 467 (575)
Q Consensus 391 v~nav~~G~D~vmLs---~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a 467 (575)
+..|+.+|||.+=+- +.--.|+|.. ..+-+..+.+.+.... . +-+ ++ ...+.+.-...|+++|
T Consensus 101 a~~Ai~~GAdEIDmViNig~lk~g~~~~-v~~eI~~v~~a~~~~~--l---KVI--lE------t~~Lt~eei~~a~~ia 166 (239)
T 3ngj_A 101 TKVAVEQGAEEVDMVINIGMVKAKKYDD-VEKDVKAVVDASGKAL--T---KVI--IE------CCYLTNEEKVEVCKRC 166 (239)
T ss_dssp HHHHHHTTCSEEEEECCHHHHHTTCHHH-HHHHHHHHHHHHTTSE--E---EEE--CC------GGGSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeehHHhccccHHH-HHHHHHHHHHHhcCCc--e---EEE--Ee------cCCCCHHHHHHHHHHH
Confidence 999999999987542 1112366542 3334444444433110 0 000 00 0011233455688999
Q ss_pred HhcCCcEEEEEcCChhH
Q 008172 468 NNLGVDAIFVYTKHGHM 484 (575)
Q Consensus 468 ~~~~AkaIVVfT~SG~T 484 (575)
.+.+|+ +|=|.||++
T Consensus 167 ~~aGAD--fVKTSTGf~ 181 (239)
T 3ngj_A 167 VAAGAE--YVKTSTGFG 181 (239)
T ss_dssp HHHTCS--EEECCCSSS
T ss_pred HHHCcC--EEECCCCCC
Confidence 999999 677777753
No 427
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=26.52 E-value=2.2e+02 Score=31.43 Aligned_cols=133 Identities=11% Similarity=0.143 Sum_probs=65.2
Q ss_pred CCCccCHHHH--------HHHHHcCCCEEEe-------------cCcCChh---------h---HHHHHHHHhccCCCCc
Q 008172 262 TLSKKDWDDI--------EFGIAEGVDFIAM-------------SFVCDAD---------S---VRHLKKYVSGKSSRSI 308 (575)
Q Consensus 262 ~lsekD~~di--------~~al~~gvd~I~~-------------SfV~sa~---------d---v~~ir~~l~~~~~~~i 308 (575)
.||+.|++.+ +.+.+.|+|+|=+ |..+... . +.++.+.+.+.-+++.
T Consensus 130 ~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~ 209 (671)
T 1ps9_A 130 ELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDF 209 (671)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCc
Confidence 5777776444 5677899999877 3333211 1 2333222322212456
Q ss_pred eEEeeec---C-------HHHHhcHHHHHhc-CCEEEEeCCCCCCCCCC---CChHHHHHHHHHHHH-HcCCCEEEehhh
Q 008172 309 KVLAKIE---N-------LESLQKFEEIVEA-SDGIMVARGDLGVDIPL---EQIPTVQEIIIHVCR-QLNKPVIVASQL 373 (575)
Q Consensus 309 ~IIaKIE---t-------~~av~nldeI~~~-sDgImIaRGDLg~e~~~---e~v~~~Qk~Ii~~c~-~~gKPvivaTq~ 373 (575)
.|..||- . .++++-...+-+. .|.|-+.-|-.....|. ..-+..+-..++..+ ..+.||+....+
T Consensus 210 ~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi 289 (671)
T 1ps9_A 210 IIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRI 289 (671)
T ss_dssp EEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSC
T ss_pred eEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCC
Confidence 6777763 1 1223223333333 79987764321111110 000011222333333 358899875322
Q ss_pred HHhhhcCCCCChhhHhhHHHHHHcc-cceEEecc
Q 008172 374 LESMVEYPTPTRAEVADVSEAVRQY-ADALMLSG 406 (575)
Q Consensus 374 LeSM~~~p~PtrAEv~Dv~nav~~G-~D~vmLs~ 406 (575)
-|+. +...++..| +|+|++..
T Consensus 290 ---------~~~~---~a~~~l~~g~aD~V~~gR 311 (671)
T 1ps9_A 290 ---------NDPQ---VADDILSRGDADMVSMAR 311 (671)
T ss_dssp ---------CSHH---HHHHHHHTTSCSEEEEST
T ss_pred ---------CCHH---HHHHHHHcCCCCEEEeCH
Confidence 2333 335567787 99999964
No 428
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=26.41 E-value=2.1e+02 Score=29.53 Aligned_cols=50 Identities=16% Similarity=0.039 Sum_probs=35.2
Q ss_pred eecCHHHHhcHHHHHhc--CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEE
Q 008172 313 KIENLESLQKFEEIVEA--SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIV 369 (575)
Q Consensus 313 KIEt~~av~nldeI~~~--sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviv 369 (575)
-=|+....+.+.++++. +|.+++..+-+|- ..--.+|+..|+++|.++.+
T Consensus 252 ~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GG-------it~~~~ia~~A~~~gi~~~~ 303 (389)
T 3ozy_A 252 TGENLYTRNAFNDYIRNDAIDVLQADASRAGG-------ITEALAISASAASAHLAWNP 303 (389)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECCCTTTSSC-------HHHHHHHHHHHHHTTCEECC
T ss_pred eCCCCCCHHHHHHHHHcCCCCEEEeCccccCC-------HHHHHHHHHHHHHcCCEEEe
Confidence 34666666677777754 8999886555542 23356888999999999875
No 429
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=26.33 E-value=3.5e+02 Score=26.63 Aligned_cols=94 Identities=17% Similarity=0.177 Sum_probs=51.5
Q ss_pred HHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHH--c-CCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcc
Q 008172 324 EEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQ--L-NKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQY 398 (575)
Q Consensus 324 deI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~--~-gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G 398 (575)
+..++. +||+++. |= .-|.+.-.. .-.+++++.+.+ . ..||++-| ...+-+|..+.+. |-..|
T Consensus 28 ~~li~~Gv~gl~~~-Gt-tGE~~~Ls~-~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ai~la~~A~~~G 95 (294)
T 2ehh_A 28 EFHVDNGTDAILVC-GT-TGESPTLTF-EEHEKVIEFAVKRAAGRIKVIAGT---------GGNATHEAVHLTAHAKEVG 95 (294)
T ss_dssp HHHHTTTCCEEEES-ST-TTTGGGSCH-HHHHHHHHHHHHHHTTSSEEEEEC---------CCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHCCCCEEEEC-cc-ccChhhCCH-HHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHHHHHHHHHHhcC
Confidence 334444 8999984 21 112222111 123344544443 2 47888754 3445566665555 66779
Q ss_pred cceEEeccCcCCCCCHHHHHHHHHHHHHHHh
Q 008172 399 ADALMLSGESAIGPFGQKAVSVLQMASSRME 429 (575)
Q Consensus 399 ~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 429 (575)
+|++|+..=--...-+.+.++..+.|++.+.
T Consensus 96 adavlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (294)
T 2ehh_A 96 ADGALVVVPYYNKPTQRGLYEHFKTVAQEVD 126 (294)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999997433222334556667777765554
No 430
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=26.21 E-value=52 Score=32.53 Aligned_cols=21 Identities=24% Similarity=0.431 Sum_probs=19.1
Q ss_pred CHHHHHHHHHcCCcEEEeeCC
Q 008172 103 SMEDLEKLAMGGMNVARLNMC 123 (575)
Q Consensus 103 ~~e~l~~li~~G~~v~RlN~S 123 (575)
+.+.++.|-+.|+|++||-++
T Consensus 33 ~~~di~~~~~~G~n~vRi~i~ 53 (305)
T 1h1n_A 33 DPNTIDTLISKGMNIFRVPFM 53 (305)
T ss_dssp CHHHHHHHHHTTCCEEEEEEC
T ss_pred CHHHHHHHHHCCCCEEEeccc
Confidence 488999999999999999875
No 431
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=26.05 E-value=1.8e+02 Score=23.97 Aligned_cols=69 Identities=12% Similarity=0.069 Sum_probs=40.8
Q ss_pred cCCcEEEEEc-----CChh-HHHHHhccCCCCcEEEEcCcHHHHH-HhcccCCcEEEEecCCC--CHHHHHHHHHHHHH
Q 008172 470 LGVDAIFVYT-----KHGH-MASLLSRNRPNPPIFAFTNDDSTRM-ALNLQWGVIPVLVNLSD--DMETNIAKTIDLIK 539 (575)
Q Consensus 470 ~~AkaIVVfT-----~SG~-TAr~VSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~Pvl~~~~~--d~d~~i~~al~~~~ 539 (575)
...++|++-. .+|. .++.+.++ |.+|||++|....... .-.+..|+.-++.+... .....++.++....
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~~~~~l~~~-~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~~~~ 126 (140)
T 3h5i_A 49 WYPDLILMDIELGEGMDGVQTALAIQQI-SELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSATEQVLITIVEMALRLYE 126 (140)
T ss_dssp CCCSEEEEESSCSSSCCHHHHHHHHHHH-CCCCEEEEESSSSCCCCGGGGGSCEEEEEETTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCCCCCHHHHHHHHHhC-CCCCEEEEECCCCHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 5677777643 3443 44555444 9999999997765322 22355699988887653 23334455544433
No 432
>3kw2_A Probable R-RNA methyltransferase; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE ADN; 2.00A {Porphyromonas gingivalis atcc 33277}
Probab=25.97 E-value=1.5e+02 Score=29.15 Aligned_cols=73 Identities=12% Similarity=0.033 Sum_probs=40.2
Q ss_pred cCCCCEEEEeCC---eeEEEEEEEECCeEEEEEecCeEecCCcccccccCcccccccccCCCCCccCHHHHHHHHHcCCC
Q 008172 204 IEVGDELVIDGG---MASFEVIEKVGNDLRCKCTDPGVFLPRAKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVD 280 (575)
Q Consensus 204 v~~Gd~IliDDG---~i~l~V~~~~~~~i~~~V~~gG~l~s~K~vn~~r~g~~~~~~~~lp~lsekD~~di~~al~~gvd 280 (575)
+++||.|.+-|| ....++.+++.+.+.+++...-...+.....+ ..-+.+|.-.++--..|..|.+.||+
T Consensus 33 l~~Gd~v~l~dg~g~~~~a~I~~i~~~~~~~~i~~~~~~~~e~~~~i-------~L~~al~K~~dr~d~iiqKatELGV~ 105 (257)
T 3kw2_A 33 MQAGDRLRLTDGRGSFFDAVIETADRKSCYVSVCGQESWQKPWRDRI-------TIAIAPTKQSERMEWMLEKLVEIGVD 105 (257)
T ss_dssp CCTTCEEEEECSBSEEEEEEEEEECSSCEEEEEEEEEECCCSSCSCE-------EEEECCCSSHHHHHHHHHHHHHHCCS
T ss_pred CCCCCEEEEEECCCCEEEEEEEEeeCCEEEEEEEEecccCCCCCCce-------EEEEecCCCcchHHHHHHHHHhhCCC
Confidence 457999998765 35667778888887777654322111111110 01112222112333446789999999
Q ss_pred EEE
Q 008172 281 FIA 283 (575)
Q Consensus 281 ~I~ 283 (575)
-|.
T Consensus 106 ~I~ 108 (257)
T 3kw2_A 106 EVV 108 (257)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 433
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=25.89 E-value=1.2e+02 Score=30.46 Aligned_cols=137 Identities=16% Similarity=0.106 Sum_probs=72.6
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhH-HHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHh----cCCEEEEe-CCCCC
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSV-RHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVE----ASDGIMVA-RGDLG 341 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv-~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~----~sDgImIa-RGDLg 341 (575)
....+...+.|+|.|..|.+.+..++ .+++ +++ ....+++-+= +++|... -+|.|-+. |+.=|
T Consensus 90 ide~qil~aaGAD~Id~s~~~~~~~li~~i~----~~~-~g~~vvv~v~------~~~Ea~~a~~~Gad~I~v~g~~gTG 158 (297)
T 4adt_A 90 FVEAQILEELKVDMLDESEVLTMADEYNHIN----KHK-FKTPFVCGCT------NLGEALRRISEGASMIRTKGEAGTG 158 (297)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCCSCSSCCCC----GGG-CSSCEEEEES------SHHHHHHHHHHTCSEEEECCCTTSC
T ss_pred HHHHHHHHHcCCCEEEcCCCCCHHHHHHHHH----hcC-CCCeEEEEeC------CHHHHHHHHhCCCCEEEECCCcCCC
Confidence 55666667899999977766444332 2222 221 1355666443 3334322 27888775 21111
Q ss_pred C-------------------CCCCCChHHHH------HHHHH-HHHHcCCCEEE-ehhhHHhhhcCCCCChhhHhhHHHH
Q 008172 342 V-------------------DIPLEQIPTVQ------EIIIH-VCRQLNKPVIV-ASQLLESMVEYPTPTRAEVADVSEA 394 (575)
Q Consensus 342 ~-------------------e~~~e~v~~~Q------k~Ii~-~c~~~gKPviv-aTq~LeSM~~~p~PtrAEv~Dv~na 394 (575)
. .++.+.+...- -..++ .+.....|+++ | ....-|. .|+..+
T Consensus 159 ~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iPVivvA--------~GGI~t~---~dv~~~ 227 (297)
T 4adt_A 159 NIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKRLPVVNFA--------AGGIATP---ADAAMC 227 (297)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCSSEEEE--------ESCCCSH---HHHHHH
T ss_pred chHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcCCCeEEEe--------cCCCCCH---HHHHHH
Confidence 0 11222221110 02222 23344678873 3 2233344 466777
Q ss_pred HHcccceEEeccCcCCCCCHHHHHHHHHHHHH
Q 008172 395 VRQYADALMLSGESAIGPFGQKAVSVLQMASS 426 (575)
Q Consensus 395 v~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 426 (575)
...|+|+++...--.....|.++++.+.....
T Consensus 228 ~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai~ 259 (297)
T 4adt_A 228 MQLGMDGVFVGSGIFESENPQKMASSIVMAVS 259 (297)
T ss_dssp HHTTCSCEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEhHHHHcCCCHHHHHHHHHHHHH
Confidence 78899999997444445689888887776543
No 434
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=25.79 E-value=1.9e+02 Score=27.61 Aligned_cols=34 Identities=6% Similarity=-0.066 Sum_probs=26.8
Q ss_pred HHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccC
Q 008172 269 DDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKS 304 (575)
Q Consensus 269 ~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~ 304 (575)
+.++.+.+.|+|+|=+..-. + ++.++++.+.+.|
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~-~-~~~~~~~~l~~~g 68 (301)
T 3cny_A 35 QLLSDIVVAGFQGTEVGGFF-P-GPEKLNYELKLRN 68 (301)
T ss_dssp HHHHHHHHHTCCEECCCTTC-C-CHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCEEEecCCC-C-CHHHHHHHHHHCC
Confidence 56788889999999877432 3 7889999998776
No 435
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=25.72 E-value=2.6e+02 Score=27.70 Aligned_cols=120 Identities=16% Similarity=0.132 Sum_probs=69.1
Q ss_pred HHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhh
Q 008172 354 EIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSR 433 (575)
Q Consensus 354 k~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 433 (575)
.-+...|+..|.++.+.. |..+.-..+...-..|++.+...+. | -++.+..+++.++-. +
T Consensus 87 ~alA~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~l~~~~~-~-- 146 (323)
T 1v71_A 87 QAIALSAKILGIPAKIIM-----------PLDAPEAKVAATKGYGGQVIMYDRY-----K-DDREKMAKEISEREG-L-- 146 (323)
T ss_dssp HHHHHHHHHTTCCEEEEE-----------ETTCCHHHHHHHHHTTCEEEEECTT-----T-TCHHHHHHHHHHHHT-C--
T ss_pred HHHHHHHHHcCCCEEEEC-----------CCCCcHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhcC-C--
Confidence 346677999999998742 2222222455566789998766543 2 134443333322111 0
Q ss_pred hhhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhc-CCcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCcH
Q 008172 434 EENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNL-GVDAIFVYTKHGHMASLLSR----NRPNPPIFAFTNDD 504 (575)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~-~AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~~ 504 (575)
+ ..++.. .+. ........+.++..++ +.+.||+.+-+|.|+--+++ ++|...|+++.+..
T Consensus 147 -------~-~i~~~~--n~~-~~~g~~t~~~Ei~~q~~~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~ 211 (323)
T 1v71_A 147 -------T-IIPPYD--HPH-VLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEA 211 (323)
T ss_dssp -------B-CCCSSS--SHH-HHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGG
T ss_pred -------E-ecCCCC--Ccc-hhhhHhHHHHHHHHhcCCCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCC
Confidence 1 111211 011 1122233456666666 47999999999998776665 56999999998754
No 436
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=25.68 E-value=3.2e+02 Score=27.13 Aligned_cols=94 Identities=13% Similarity=0.084 Sum_probs=51.8
Q ss_pred HHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHH---cCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcc
Q 008172 324 EEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQ---LNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQY 398 (575)
Q Consensus 324 deI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~---~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G 398 (575)
+..++. +|||++. |= .-|.+.-.. .-.+++++.+.+ -..|||+-| ...+-.|..+.+. |-..|
T Consensus 39 ~~li~~Gv~Gl~v~-Gt-TGE~~~Ls~-eEr~~v~~~~~~~~~grvpViaGv---------g~~~t~~ai~la~~A~~~G 106 (303)
T 2wkj_A 39 QFNIQQGIDGLYVG-GS-TGEAFVQSL-SEREQVLEIVAEEAKGKIKLIAHV---------GCVSTAESQQLAASAKRYG 106 (303)
T ss_dssp HHHHHTTCSEEEES-ST-TTTGGGSCH-HHHHHHHHHHHHHHTTTSEEEEEC---------CCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCEEEEC-ee-ccChhhCCH-HHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHHHHHHHHHHhCC
Confidence 333444 8999985 22 122222111 223344444443 246888754 2445556655555 66679
Q ss_pred cceEEeccCcCCCCCHHHHHHHHHHHHHHHh
Q 008172 399 ADALMLSGESAIGPFGQKAVSVLQMASSRME 429 (575)
Q Consensus 399 ~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 429 (575)
+|++|+..=--...-+-+.++..+.|++.+.
T Consensus 107 adavlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 107 FDAVSAVTPFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHHHHHHHHHT
T ss_pred CCEEEecCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 9999997433223334566777777776665
No 437
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=25.65 E-value=2.4e+02 Score=27.74 Aligned_cols=123 Identities=17% Similarity=0.082 Sum_probs=69.2
Q ss_pred HHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhh
Q 008172 355 IIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSRE 434 (575)
Q Consensus 355 ~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 434 (575)
-+...|++.|.++.+-. |..+....+...-..|++.+...++ +.| -++++...++.++-. +
T Consensus 79 a~A~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~---~~~-~~~~~~a~~~~~~~~-~--- 139 (303)
T 1o58_A 79 AIAMIGAKRGHRVILTM-----------PETMSVERRKVLKMLGAELVLTPGE---LGM-KGAVEKALEISRETG-A--- 139 (303)
T ss_dssp HHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGG---GHH-HHHHHHHHHHHHHHC-C---
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCC---CCH-HHHHHHHHHHHHhcC-e---
Confidence 46677899999998742 3222233445566789998775432 113 345443333322110 0
Q ss_pred hhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcC--CcEEEEEcCChhHHHHHhc----cCCC-CcEEEEcCcHH
Q 008172 435 ENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLG--VDAIFVYTKHGHMASLLSR----NRPN-PPIFAFTNDDS 505 (575)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--AkaIVVfT~SG~TAr~VSr----~RP~-~PIiAvT~~~~ 505 (575)
+ ...+. ..+..+..-....+.++.++++ .+.||+.+-+|.++--+++ ..|. ..|+++.+...
T Consensus 140 ------~-~~~~~--~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~ 208 (303)
T 1o58_A 140 ------H-MLNQF--ENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKS 208 (303)
T ss_dssp ------B-CCCTT--TCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTS
T ss_pred ------E-eCCCC--CCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence 1 11111 0011111112333567777775 6999999999998876664 3588 89999987543
No 438
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=25.62 E-value=1.5e+02 Score=30.29 Aligned_cols=66 Identities=12% Similarity=0.138 Sum_probs=47.8
Q ss_pred hHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 292 SVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 292 dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
-+..+.+.+.+.+ ..+.+-+--+.... +.+++++-.|.|+.+-.+ +..+..+-+.|+++++|+|.+
T Consensus 91 Ka~~~~~~l~~ln-p~v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d~----------~~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 91 RAEASLERAQNLN-PMVDVKVDTEDIEK--KPESFFTQFDAVCLTCCS----------RDVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp HHHHHHHHHHHTC-TTSEEEEECSCGGG--CCHHHHTTCSEEEEESCC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhHC-CCeEEEEEecccCc--chHHHhcCCCEEEEcCCC----------HHHHHHHHHHHHHcCCCEEEE
Confidence 4555666677665 56777666555443 567888889999887332 467778999999999999965
No 439
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=25.59 E-value=72 Score=27.44 Aligned_cols=41 Identities=12% Similarity=0.270 Sum_probs=31.3
Q ss_pred HHHHHHHH-HHhcCCcEEEEEcCC--------hhHHHHHhccCCCCcEEEE
Q 008172 459 ICNCAVDM-ANNLGVDAIFVYTKH--------GHMASLLSRNRPNPPIFAF 500 (575)
Q Consensus 459 ia~~av~~-a~~~~AkaIVVfT~S--------G~TAr~VSr~RP~~PIiAv 500 (575)
.+...++. |.+.+++.||+-++. |+++..+.+.-| ||++.+
T Consensus 106 ~~~~I~~~~a~~~~~DlIV~G~~g~~~~~~~~Gs~~~~vl~~a~-~PVlvV 155 (156)
T 3fg9_A 106 VDDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKAP-ISVIVV 155 (156)
T ss_dssp HHHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHHHCS-SEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCccceeecchHHHHHHhCC-CCEEEe
Confidence 44555676 788999998888762 678888888766 999876
No 440
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=25.58 E-value=3e+02 Score=32.14 Aligned_cols=125 Identities=11% Similarity=0.168 Sum_probs=80.2
Q ss_pred HHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccC-------------C------CCceEEeeecCHHHHhcHHHHHh
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKS-------------S------RSIKVLAKIENLESLQKFEEIVE 328 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~-------------~------~~i~IIaKIEt~~av~nldeI~~ 328 (575)
.+.++.|.+.|.+.|++.--.+..-+.++.+..+..| . -++.++++ +.+|+.|+-+++.
T Consensus 25 ~elv~~A~~~Gl~alAITDH~~~~G~~~~~~~~~~~gIk~I~G~Ei~~~~~~~~~~~~hlv~la~--n~~g~~nL~~l~s 102 (910)
T 2hnh_A 25 APLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAA--NNTGYQNLTLLIS 102 (910)
T ss_dssp HHHHHHHHHTTCSEEEECCBTCCTTHHHHHHHHHHHTCEEEEEEEEEEECTTTTTCCEEEEEEEC--SHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEeCCcchhHHHHHHHHHHCCCeEEEEEEEEEecCCCCcccceEEEEEc--CHHHHHHHHHHHH
Confidence 3566889999999999998777776666655544222 1 13445554 6788888654443
Q ss_pred ---------------------cCCEEEEeCCCC-------------------------------CCCCC---CCChHHHH
Q 008172 329 ---------------------ASDGIMVARGDL-------------------------------GVDIP---LEQIPTVQ 353 (575)
Q Consensus 329 ---------------------~sDgImIaRGDL-------------------------------g~e~~---~e~v~~~Q 353 (575)
..+|+++.-|-. -+|+. .+.-...-
T Consensus 103 ~~~~~~~~~~~p~i~~~~L~~~~~glI~isg~~~G~v~~~l~~~~~e~a~~~a~~~~~~f~~~~yLEi~~~~~~~~~~~n 182 (910)
T 2hnh_A 103 KAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEEHFPDRYFLELIRTGRPDEESYL 182 (910)
T ss_dssp HHHHHCCCTTCCCEETTHHHHSCTTEEEECCGGGSHHHHHHHHTCHHHHHHHHHHHHHHCTTSEEEEECCSSCTTHHHHH
T ss_pred HHHhhccccCCCCCCHHHHHHhCCCCEEEECCCcchHHHHHhcCCHHHHHHHHHHHHHhcCCCEEEEEcCCCChhHHHHH
Confidence 344544432221 11221 12223456
Q ss_pred HHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHccc
Q 008172 354 EIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYA 399 (575)
Q Consensus 354 k~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~ 399 (575)
+.+++.|++.|+|++..+.. +...|.+.+..||..|+..|.
T Consensus 183 ~~l~~lA~~~giplVAtnDv-----Hy~~~~D~~~~dvL~aI~~g~ 223 (910)
T 2hnh_A 183 HAAVELAEARGLPVVATNDV-----RFIDSSDFDAHEIRVAIHDGF 223 (910)
T ss_dssp HHHHHHHHHHTCCEEECCCB-----CBSSGGGHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCEEEeCCc-----ccCChhhhHHHHHHHHHHcCC
Confidence 68899999999999975543 234788889999999998876
No 441
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=25.54 E-value=56 Score=32.52 Aligned_cols=60 Identities=18% Similarity=0.279 Sum_probs=37.8
Q ss_pred CceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCC--CHHHHHHHHHHHHHHhhhcCCceEEEE
Q 008172 90 KTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHN--TREWHLDVIRKIKQLNHEKLFCISVMI 152 (575)
Q Consensus 90 ~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg--~~e~~~~~i~~ir~~~~~~~~~i~Il~ 152 (575)
+.+=++++-|.. +.+.|++|.+.|+..+|+|+..+ ..-....+...++.+. + |.++-+.+
T Consensus 96 r~~Gva~vdp~~-~~~eL~~l~~~G~rGvR~~~~~~~~~~~~~~~~~~~~~~l~-~-gl~v~l~~ 157 (303)
T 4d9a_A 96 KARGIAVVDPAI-DEAELAALHEGGMRGIRFNFLKRLVDDAPKDKFLEVAGRLP-A-GWHVVIYF 157 (303)
T ss_dssp SEEEEECCCTTC-CHHHHHHHHHTTEEEEEEECCTTTCSCCCHHHHHHHHTSCC-T-TCEEEEEC
T ss_pred cEEEEEEeCCCC-CHHHHHHHHHCCCCEEEeecccCCccccCHHHHHHHHHHHh-c-CCEEEEec
Confidence 345556887754 67899999999999999999754 2222223333333333 3 66665554
No 442
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=25.49 E-value=2.1e+02 Score=24.19 Aligned_cols=53 Identities=13% Similarity=0.107 Sum_probs=35.1
Q ss_pred CCcEEEEEcC----Chh-HHHHHhccCCCCcEEEEcCc--HHHHHHhcccCCcEEEEecCC
Q 008172 471 GVDAIFVYTK----HGH-MASLLSRNRPNPPIFAFTND--DSTRMALNLQWGVIPVLVNLS 524 (575)
Q Consensus 471 ~AkaIVVfT~----SG~-TAr~VSr~RP~~PIiAvT~~--~~~aR~L~L~~GV~Pvl~~~~ 524 (575)
..++|++-.. +|. .++.+.+..|.+|||++|.. .....++ +..|+.-++.+..
T Consensus 83 ~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~-~~~g~~~~l~KP~ 142 (157)
T 3hzh_A 83 NIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDC-LIKGAKTFIVKPL 142 (157)
T ss_dssp GCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHH-HHTTCSEEEESSC
T ss_pred CCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHH-HHcCCCEEEeCCC
Confidence 4676665432 343 45677777899999999976 4444433 6778888887654
No 443
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=25.47 E-value=3.6e+02 Score=26.86 Aligned_cols=86 Identities=14% Similarity=0.156 Sum_probs=41.2
Q ss_pred hhHHHHHHHHHHHhcCC----cEEEEEcCChhHHHHHhccC--CCCcEEEEcCcH--HHHHHhcccCCcEEEEecCCCCH
Q 008172 456 AEQICNCAVDMANNLGV----DAIFVYTKHGHMASLLSRNR--PNPPIFAFTNDD--STRMALNLQWGVIPVLVNLSDDM 527 (575)
Q Consensus 456 ~~~ia~~av~~a~~~~A----kaIVVfT~SG~TAr~VSr~R--P~~PIiAvT~~~--~~aR~L~L~~GV~Pvl~~~~~d~ 527 (575)
.+.-+...+..|.+.+. +.||..| +|++++-+|.+- -..|.+.+.|.. ..-+++.-.+|-.-++++...+.
T Consensus 53 K~R~a~~~l~~a~~~g~l~~~~~vv~aS-sGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 131 (325)
T 3dwg_A 53 KDRPAVRMIEQAEADGLLRPGATILEPT-SGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGS 131 (325)
T ss_dssp THHHHHHHHHHHHHTTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECSTTTH
T ss_pred HHHHHHHHHHHHHHcCCCCCCCEEEEeC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCH
Confidence 34455555555555554 5555544 677666554421 134444444332 11122222456666666544445
Q ss_pred HHHHHHHHHHHHHcC
Q 008172 528 ETNIAKTIDLIKMKG 542 (575)
Q Consensus 528 d~~i~~al~~~~~~g 542 (575)
++..+.+.+.+.+.+
T Consensus 132 ~~~~~~a~~l~~~~~ 146 (325)
T 3dwg_A 132 NTAVATAKELAATNP 146 (325)
T ss_dssp HHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCC
Confidence 555555555555544
No 444
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=25.43 E-value=57 Score=27.38 Aligned_cols=41 Identities=2% Similarity=-0.054 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCChhHHHHHhccCCCCcEEEE
Q 008172 459 ICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAF 500 (575)
Q Consensus 459 ia~~av~~a~~~~AkaIVVfT~SG~TAr~VSr~RP~~PIiAv 500 (575)
.+...++.|.+.+++.||+-++.-+++..+.+.-| |||+.+
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~g~sv~~~vl~~a~-~PVlvv 137 (138)
T 1q77_A 97 LSEEVKKFVEGKGYELVVWACYPSAYLCKVIDGLN-LASLIV 137 (138)
T ss_dssp HHHHHHHHHTTSCCSEEEECSCCGGGTHHHHHHSS-SEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHhCC-CceEee
Confidence 44555678889999987777653367777777766 888864
No 445
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=25.43 E-value=4.3e+02 Score=25.95 Aligned_cols=119 Identities=13% Similarity=0.101 Sum_probs=67.7
Q ss_pred HHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhh
Q 008172 355 IIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSRE 434 (575)
Q Consensus 355 ~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 434 (575)
-+...|++.|.++.+.. |..+.-..+...-..|++.+... |.| -++.+...++.++ +.
T Consensus 68 alA~~a~~~G~~~~i~~-----------p~~~~~~k~~~~~~~Ga~V~~~~-----~~~-~~~~~~a~~~~~~-~~---- 125 (318)
T 2rkb_A 68 AAAYAARKLGIPATIVL-----------PESTSLQVVQRLQGEGAEVQLTG-----KVW-DEANLRAQELAKR-DG---- 125 (318)
T ss_dssp HHHHHHHHHTCCEEEEE-----------CTTCCHHHHHHHHHTTCEEEECC-----SSH-HHHHHHHHHHHHS-TT----
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCcHHHHHHHHhcCCEEEEEC-----CCH-HHHHHHHHHHHHh-cC----
Confidence 46678999999998742 22222233445556899877643 233 4454443333211 00
Q ss_pred hhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcC--CcEEEEEcCChhHHHHHhcc-----CCCCcEEEEcCcH
Q 008172 435 ENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLG--VDAIFVYTKHGHMASLLSRN-----RPNPPIFAFTNDD 504 (575)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--AkaIVVfT~SG~TAr~VSr~-----RP~~PIiAvT~~~ 504 (575)
.+ ...+.. .+ .....-...+.++..+++ .+.||+.+-+|.|+--++++ .|...|+++.+..
T Consensus 126 -----~~-~~~~~~--n~-~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~ 193 (318)
T 2rkb_A 126 -----WE-NVPPFD--HP-LIWKGHASLVQELKAVLRTPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHG 193 (318)
T ss_dssp -----EE-ECCSSC--SH-HHHHHHHHHHHHHHHHSSSCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETT
T ss_pred -----CE-EeCCCC--Ch-hhccchhHHHHHHHHhcCCCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCC
Confidence 01 111111 01 112223344567777775 68999999999988766653 3889999998753
No 446
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=25.41 E-value=1e+02 Score=28.68 Aligned_cols=50 Identities=20% Similarity=0.292 Sum_probs=37.3
Q ss_pred CHHHHhcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHH-------HcCCCEEEe
Q 008172 316 NLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCR-------QLNKPVIVA 370 (575)
Q Consensus 316 t~~av~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~-------~~gKPviva 370 (575)
.++.+..+.+-++.+||++|+--..- -.+|.+-|-.++-+. -.||||.+.
T Consensus 54 ~p~~~~~l~~~i~~aD~~ii~tPeYn-----~s~pg~LKn~iDwlsr~~~~~~~~gKpv~~v 110 (190)
T 3u7r_A 54 APESVLRLKDRIEHSDAVLAITPEYN-----RSYPGMIKNAIDWATRPYGQNSWKGKPAAVI 110 (190)
T ss_dssp CCHHHHHHHHHHHTSSEEEEECCCBT-----TBCCHHHHHHHHHHHCSTTCCTTTTCEEEEE
T ss_pred CCHHHHHHHHHHHhCCcEEEechhhc-----ccCCHHHHHHHHHhcccccCCccCCCEEEEE
Confidence 46788888889999999999833322 346688888888773 268999875
No 447
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=25.41 E-value=1.2e+02 Score=30.94 Aligned_cols=59 Identities=14% Similarity=0.058 Sum_probs=37.5
Q ss_pred CceEEEecCCCCCCH----HHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeC
Q 008172 90 KTKMVCTIGPACCSM----EDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDT 154 (575)
Q Consensus 90 ~tkIi~TiGPas~~~----e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl 154 (575)
+....+|+|- .++ +..+++.++|.+.+.+++.| +.+.-.+ .++.+.+..|..+.|++|.
T Consensus 134 ~v~~~~~~~~--~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e---~v~avr~a~g~d~~l~vDa 196 (379)
T 2rdx_A 134 GAPMYRVAPQ--RSEAETRAELARHRAAGYRQFQIKVGA-DWQSDID---RIRACLPLLEPGEKAMADA 196 (379)
T ss_dssp SEEBCEECCC--SCSHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHH---HHHHHGGGSCTTCEEEEEC
T ss_pred ceeEEEEecC--CCHHHHHHHHHHHHHcCCCEEEEeccC-CHHHHHH---HHHHHHHhcCCCCEEEEEC
Confidence 4556677763 233 34577889999999999998 4444444 4444445555455666665
No 448
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=25.31 E-value=2.2e+02 Score=30.12 Aligned_cols=127 Identities=11% Similarity=0.040 Sum_probs=67.9
Q ss_pred HHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhh
Q 008172 355 IIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSRE 434 (575)
Q Consensus 355 ~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 434 (575)
-+...|+..|.++++.. |..+.-..+...-..|++.+....+...+ .+..+++...++.++....
T Consensus 175 AlA~aaa~~Gi~~~Ivm-----------P~~~s~~k~~~l~~~GAeVv~v~~~~~~d-~~~~~~~~a~~la~~~~~~--- 239 (435)
T 1jbq_A 175 GLALAAAVRGYRCIIVM-----------PEKMSSEKVDVLRALGAEIVRTPTNARFD-SPESHVGVAWRLKNEIPNS--- 239 (435)
T ss_dssp HHHHHHHHHTCEEEEEE-----------CSCCCHHHHHHHHHTTCEEEECCC--------CCHHHHHHHHHHHSTTE---
T ss_pred HHHHHHHHcCCeEEEEe-----------CCCCCHHHHHHHHhCCCEEEEecCCCCcc-hHHHHHHHHHHHHHhcCCe---
Confidence 46677899999998741 32222334455567899977765432111 1111233333332221110
Q ss_pred hhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcC--CcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCcHH
Q 008172 435 ENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLG--VDAIFVYTKHGHMASLLSR----NRPNPPIFAFTNDDS 505 (575)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~~~ 505 (575)
+ ..++... +.++..-....+.++.++++ .++||+.+-+|.|+--+++ ..|.+.||+|.+...
T Consensus 240 ------~-~i~q~~n--~~n~~ag~~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs 307 (435)
T 1jbq_A 240 ------H-ILDQYRN--ASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGS 307 (435)
T ss_dssp ------E-CCCTTTC--THHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTC
T ss_pred ------E-EeCccCC--cccHHHHHHHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCc
Confidence 0 1111111 11111112333567777764 6999999999998766665 479999999977543
No 449
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=25.25 E-value=5.5e+02 Score=26.06 Aligned_cols=102 Identities=10% Similarity=0.007 Sum_probs=54.2
Q ss_pred HHHHHHHHcCCCEEEecC------cCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEEeCCCCC
Q 008172 269 DDIEFGIAEGVDFIAMSF------VCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMVARGDLG 341 (575)
Q Consensus 269 ~di~~al~~gvd~I~~Sf------V~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImIaRGDLg 341 (575)
...+.++..|+..+...- +.+.+.+....+.......-+.....-+. ++.++.+.++++. +.++=+.-..-.
T Consensus 81 ~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~g~~~~~~~l~~~~ 159 (448)
T 3hm7_A 81 SGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLV-PGNIDHLQDLHDGGVIGFKAFMSECG 159 (448)
T ss_dssp HHHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEEEEEECC-TTCGGGHHHHHHTTCSEEEEESSSCS
T ss_pred HHHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEEEEEEec-ccCHHHHHHHHHcCCCEEEEeecccc
Confidence 445677889998876643 34566666655554433222233333332 2225566666653 333322211100
Q ss_pred CCCCCCChHHHHHHHHHHHHHcCCCEEEeh
Q 008172 342 VDIPLEQIPTVQEIIIHVCRQLNKPVIVAS 371 (575)
Q Consensus 342 ~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaT 371 (575)
..-+...-....++.++.+++.|+|+++=.
T Consensus 160 ~~~~~~~~~~~l~~~l~~a~~~g~~v~vH~ 189 (448)
T 3hm7_A 160 TDDFQFSHDETLLKGMKKIAALGSILAVHA 189 (448)
T ss_dssp SSSSCCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CCccCcCCHHHHHHHHHHHHhcCCEEEEEe
Confidence 000012234566788899999999999744
No 450
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=25.15 E-value=1.3e+02 Score=30.00 Aligned_cols=102 Identities=18% Similarity=0.186 Sum_probs=56.8
Q ss_pred cCcCChhhHHHHHHHHhccCCCCceEEeee----cCHHHHhcHHHHHhc-CCEEEEeCC-CCCCCCCCCChHHHHHHHHH
Q 008172 285 SFVCDADSVRHLKKYVSGKSSRSIKVLAKI----ENLESLQKFEEIVEA-SDGIMVARG-DLGVDIPLEQIPTVQEIIIH 358 (575)
Q Consensus 285 SfV~sa~dv~~ir~~l~~~~~~~i~IIaKI----Et~~av~nldeI~~~-sDgImIaRG-DLg~e~~~e~v~~~Qk~Ii~ 358 (575)
++.++++-+.++.+.+.+.- ...|..|| +..+.++-...+.+. +|+|.|--+ .+..--+.... ..++
T Consensus 106 ~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~-----~~i~ 178 (318)
T 1vhn_A 106 ALLKDLRHFRYIVRELRKSV--SGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEW-----KALS 178 (318)
T ss_dssp GGGSCHHHHHHHHHHHHHHC--SSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCG-----GGGG
T ss_pred chhhCHHHHHHHHHHHHHhh--CCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCH-----HHHH
Confidence 34456666666666665432 26788885 333333333444444 899988633 22211122222 2233
Q ss_pred HHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHH-cccceEEecc
Q 008172 359 VCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVR-QYADALMLSG 406 (575)
Q Consensus 359 ~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~-~G~D~vmLs~ 406 (575)
..++ +.|||....+ -| ..|+..++. .|+|+||+..
T Consensus 179 ~i~~-~ipVi~~GgI---------~s---~~da~~~l~~~gad~V~iGR 214 (318)
T 1vhn_A 179 VLEK-RIPTFVSGDI---------FT---PEDAKRALEESGCDGLLVAR 214 (318)
T ss_dssp GSCC-SSCEEEESSC---------CS---HHHHHHHHHHHCCSEEEESG
T ss_pred HHHc-CCeEEEECCc---------CC---HHHHHHHHHcCCCCEEEECH
Confidence 3334 8999986543 23 345567777 5999999974
No 451
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=25.15 E-value=4.3e+02 Score=26.10 Aligned_cols=102 Identities=14% Similarity=0.053 Sum_probs=54.3
Q ss_pred CCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccC---cCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHh
Q 008172 364 NKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGE---SAIGPFGQKAVSVLQMASSRMELWSREENRQSA 440 (575)
Q Consensus 364 gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~E---Ta~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~ 440 (575)
|.++-++|-+ +.-..+.|+.+.+.++..|+.+|||-|=+-=- --.|+|. ...+-+..+.+.+..... +-
T Consensus 92 gs~v~v~tVi--gFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~-~v~~eI~~v~~a~~~~~l-----KV 163 (260)
T 3r12_A 92 GTDVKVVTVV--GFPLGANETRTKAHEAIFAVESGADEIDMVINVGMLKAKEWE-YVYEDIRSVVESVKGKVV-----KV 163 (260)
T ss_dssp TSCCEEEEEE--STTTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCHH-HHHHHHHHHHHHTTTSEE-----EE
T ss_pred CCCCeEEEEe--cCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhccccHH-HHHHHHHHHHHhcCCCcE-----EE
Confidence 4455555532 33344467777889999999999998754211 1114442 223333444333221000 00
Q ss_pred hhcccccCCCCCCchhhHHHHHHHHHHHhcCCcEEEEEcCChh
Q 008172 441 LCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGH 483 (575)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~AkaIVVfT~SG~ 483 (575)
+ ++ .....+.--..|+++|.+.+|+ +|=|.||.
T Consensus 164 I--lE------t~~Lt~eei~~A~~ia~eaGAD--fVKTSTGf 196 (260)
T 3r12_A 164 I--IE------TCYLDTEEKIAACVISKLAGAH--FVKTSTGF 196 (260)
T ss_dssp E--CC------GGGCCHHHHHHHHHHHHHTTCS--EEECCCSS
T ss_pred E--Ee------CCCCCHHHHHHHHHHHHHhCcC--EEEcCCCC
Confidence 0 00 0011223346688999999999 57777774
No 452
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=25.15 E-value=2.9e+02 Score=27.08 Aligned_cols=122 Identities=11% Similarity=0.060 Sum_probs=69.0
Q ss_pred HHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhh
Q 008172 355 IIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSRE 434 (575)
Q Consensus 355 ~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 434 (575)
-+...|+..|.|+.+-. |.......+...-..|++.+...++ |.| -++.+...++.++.+.+
T Consensus 75 a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~Ga~v~~~~~~---~~~-~~~~~~a~~~~~~~~~~--- 136 (303)
T 2v03_A 75 ALAMIAALKGYRMKLLM-----------PDNMSQERRAAMRAYGAELILVTKE---QGM-EGARDLALEMANRGEGK--- 136 (303)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECTT---THH-HHHHHHHHHHHHTTSCE---
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCC---CCH-HHHHHHHHHHHHhCCCc---
Confidence 46677889999998742 3222233445566789998777642 223 24444333332111110
Q ss_pred hhhHHhhhcccccCCCCCCchhhHHHHHHHHHHHhcC--CcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCcH
Q 008172 435 ENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLG--VDAIFVYTKHGHMASLLSR----NRPNPPIFAFTNDD 504 (575)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~~ 504 (575)
+ ..+.. .+..+..-....+.++..+++ .+.||+.+-+|.++--+++ ..|...|+++.+..
T Consensus 137 ------~--~~~~~--n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~ 202 (303)
T 2v03_A 137 ------L--LDQFN--NPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEE 202 (303)
T ss_dssp ------E--CCTTT--CTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECT
T ss_pred ------c--cCCcC--ChhhHHHhcCCcHHHHHHHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 0 11110 111111112333567777775 6899999999998766554 46999999998754
No 453
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=25.09 E-value=60 Score=36.12 Aligned_cols=132 Identities=18% Similarity=0.173 Sum_probs=65.9
Q ss_pred CCCccCHHHH--------HHHHHcCCCEEEecC--------------cCChh------------hHHHHHHHHhccCCCC
Q 008172 262 TLSKKDWDDI--------EFGIAEGVDFIAMSF--------------VCDAD------------SVRHLKKYVSGKSSRS 307 (575)
Q Consensus 262 ~lsekD~~di--------~~al~~gvd~I~~Sf--------------V~sa~------------dv~~ir~~l~~~~~~~ 307 (575)
.||+.|++.+ ++|.+.|+|+|=+-. .+... -+.++.+.+.+.-+++
T Consensus 145 ~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~ 224 (690)
T 3k30_A 145 AMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGR 224 (690)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 5677776665 467889999998821 12111 2333333333221245
Q ss_pred ceEEeee---cC-------HHHHhcHHHHHhcCCEEEEeCCCCCCCCCCC--ChHHHHHHHHHHHHH-cCCCEEEehhhH
Q 008172 308 IKVLAKI---EN-------LESLQKFEEIVEASDGIMVARGDLGVDIPLE--QIPTVQEIIIHVCRQ-LNKPVIVASQLL 374 (575)
Q Consensus 308 i~IIaKI---Et-------~~av~nldeI~~~sDgImIaRGDLg~e~~~e--~v~~~Qk~Ii~~c~~-~gKPvivaTq~L 374 (575)
..|..|| |. .++++-...+-+..|.+-|.-|.+......+ .-+..+...++..++ .+.|||....+
T Consensus 225 ~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i- 303 (690)
T 3k30_A 225 AAVACRITVEEEIDGGITREDIEGVLRELGELPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRF- 303 (690)
T ss_dssp SEEEEEEECCCCSTTSCCHHHHHHHHHHHTTSSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECSCC-
T ss_pred ceEEEEECccccCCCCCCHHHHHHHHHHHHhhcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeCCC-
Confidence 6788888 11 1222222222223688877765432111000 001112233333333 48899975432
Q ss_pred HhhhcCCCCChhhHhhHHHHHHcc-cceEEec
Q 008172 375 ESMVEYPTPTRAEVADVSEAVRQY-ADALMLS 405 (575)
Q Consensus 375 eSM~~~p~PtrAEv~Dv~nav~~G-~D~vmLs 405 (575)
-+.+ +...++..| +|+|++.
T Consensus 304 --------~~~~---~a~~~l~~g~~d~v~~g 324 (690)
T 3k30_A 304 --------TSPD---AMVRQIKAGILDLIGAA 324 (690)
T ss_dssp --------CCHH---HHHHHHHTTSCSEEEES
T ss_pred --------CCHH---HHHHHHHCCCcceEEEc
Confidence 2222 234567777 9999995
No 454
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=24.96 E-value=3e+02 Score=26.15 Aligned_cols=86 Identities=13% Similarity=0.144 Sum_probs=55.2
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------hhHHHHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEec--CCCC-
Q 008172 459 ICNCAVDMANNLGVDAIFVYTKH---------GHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVN--LSDD- 526 (575)
Q Consensus 459 ia~~av~~a~~~~AkaIVVfT~S---------G~TAr~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~--~~~d- 526 (575)
.+...++.+.+.+++.||+-++. |.++..+.+.-| ||++.+-+... |....++++ ....
T Consensus 77 ~~~~i~~~a~~~~~dliV~G~~~~~~~~~~~~gs~~~~vl~~~~-~PVlvv~~~~~--------~~~~~Ilva~D~s~~~ 147 (290)
T 3mt0_A 77 LHQTIIAEQQAEGCGLIIKQHFPDNPLKKAILTPDDWKLLRFAP-CPVLMTKTARP--------WTGGKILAAVDVGNND 147 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCSCTTSTTSCCHHHHHHHHHCS-SCEEEECCCSC--------STTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHhcCCCEEEEecccCCchhhcccCHHHHHHHhcCC-CCEEEecCCCC--------CCCCeEEEEECCCCcc
Confidence 34445567778899988887652 678888887655 99999964432 133445554 3344
Q ss_pred ------HHHHHHHHHHHHHHcCCCCCCCEEEEEecCCC
Q 008172 527 ------METNIAKTIDLIKMKGMVKYGDAVLVVLDLTP 558 (575)
Q Consensus 527 ------~d~~i~~al~~~~~~g~~k~GD~VVvv~G~~~ 558 (575)
....++.|...+... |..+.++.-++.
T Consensus 148 ~~~~~~s~~al~~a~~la~~~-----~a~l~ll~v~~~ 180 (290)
T 3mt0_A 148 GEHRSLHAGIISHAYDIAGLA-----KATLHVISAHPS 180 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-----TCEEEEEEEEC-
T ss_pred hhhhHHHHHHHHHHHHHHHHc-----CCeEEEEEEecC
Confidence 566778888877763 456666655443
No 455
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=24.91 E-value=95 Score=27.30 Aligned_cols=44 Identities=9% Similarity=0.217 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------hhHHHHHhccCCCCcEEEEcCc
Q 008172 459 ICNCAVDMANNLGVDAIFVYTKH---------GHMASLLSRNRPNPPIFAFTND 503 (575)
Q Consensus 459 ia~~av~~a~~~~AkaIVVfT~S---------G~TAr~VSr~RP~~PIiAvT~~ 503 (575)
.+...++.|.+.+++.||+-+.. |+++..+.+.-| |||+.+-+.
T Consensus 112 ~~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a~-~pVlvv~~~ 164 (175)
T 2gm3_A 112 PKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAE-CPVMTIKRN 164 (175)
T ss_dssp HHHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCS-SCEEEEECC
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCCC-CCEEEEcCC
Confidence 34555678888999998888762 557788888766 999998654
No 456
>1z85_A Hypothetical protein TM1380; alpha/beta knot fold, structural genomics, joint center for structural genomics, JCSG; 2.12A {Thermotoga maritima}
Probab=24.88 E-value=1.5e+02 Score=28.66 Aligned_cols=72 Identities=14% Similarity=-0.008 Sum_probs=40.7
Q ss_pred cCCCCEEEEeCC---eeEEEEEEEECCeEEEEEecCeEecCCcccccccCcccccccccCCCCCccCHHHHHHHHHcCCC
Q 008172 204 IEVGDELVIDGG---MASFEVIEKVGNDLRCKCTDPGVFLPRAKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVD 280 (575)
Q Consensus 204 v~~Gd~IliDDG---~i~l~V~~~~~~~i~~~V~~gG~l~s~K~vn~~r~g~~~~~~~~lp~lsekD~~di~~al~~gvd 280 (575)
+++||.|.+-|| ....++.+++.+.+.+++...-...+.....+ ..-+.+|. .++--..+..|.+.|++
T Consensus 41 l~~Gd~v~l~dg~G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~i-------~L~~al~K-~~r~e~ilqkatELGV~ 112 (234)
T 1z85_A 41 LKEGDVIEATDGNGFSYTCILKSLKKKTAAAKIVKVEEKEKEPTEKL-------SVVVPIGR-WERTRFLIEKCVELGVD 112 (234)
T ss_dssp CCTTCEEEEECSBSEEEEEEEEEECSSCEEEEEEEEEECCCCCSSCE-------EEEEECCC-HHHHHHHHHHHHHTTCS
T ss_pred CCCCCEEEEEeCCCCEEEEEEEEecCCEEEEEEEEEeccCCCCCceE-------EEEEeccc-hHHHHHHHHHHHHhCCC
Confidence 468999998654 45567778888877776654321111111100 11223333 23333466789999999
Q ss_pred EEE
Q 008172 281 FIA 283 (575)
Q Consensus 281 ~I~ 283 (575)
-|.
T Consensus 113 ~I~ 115 (234)
T 1z85_A 113 EIF 115 (234)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
No 457
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=24.83 E-value=2.9e+02 Score=27.90 Aligned_cols=87 Identities=17% Similarity=0.234 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHhccCCCCceEEeeecCH------HHHhcHHHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHH
Q 008172 290 ADSVRHLKKYVSGKSSRSIKVLAKIENL------ESLQKFEEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQ 362 (575)
Q Consensus 290 a~dv~~ir~~l~~~~~~~i~IIaKIEt~------~av~nldeI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~ 362 (575)
.+-++.+++.....+ .+..|+|..|.. ++++....-.+. +|+||+ +-..=+.-.+++.+...
T Consensus 138 ~~rI~Aa~~A~~~~~-~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi---------~g~~~~~ei~~~~~~~~- 206 (302)
T 3fa4_A 138 VTRIRAAVQARQRIG-SDIVVIARTDSLQTHGYEESVARLRAARDAGADVGFL---------EGITSREMARQVIQDLA- 206 (302)
T ss_dssp HHHHHHHHHHHHHHT-CCCEEEEEECCHHHHCHHHHHHHHHHHHTTTCSEEEE---------TTCCCHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHhcC-CCEEEEEEecccccCCHHHHHHHHHHHHHcCCCEEee---------cCCCCHHHHHHHHHHhc-
Q ss_pred cCCCEEEehhhHHhhhcCCCCChhhHhhH
Q 008172 363 LNKPVIVASQLLESMVEYPTPTRAEVADV 391 (575)
Q Consensus 363 ~gKPvivaTq~LeSM~~~p~PtrAEv~Dv 391 (575)
++|+.+ +|++. -..|..|.+|+.+.
T Consensus 207 -~~Pl~~--n~~~~-g~~p~~~~~eL~~l 231 (302)
T 3fa4_A 207 -GWPLLL--NMVEH-GATPSISAAEAKEM 231 (302)
T ss_dssp -TSCEEE--ECCTT-SSSCCCCHHHHHHH
T ss_pred -CCceeE--EEecC-CCCCCCCHHHHHHc
No 458
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=24.82 E-value=91 Score=30.00 Aligned_cols=57 Identities=11% Similarity=-0.011 Sum_probs=39.6
Q ss_pred HHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHH
Q 008172 353 QEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMAS 425 (575)
Q Consensus 353 Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~ 425 (575)
-..+++.++++|++|.+-|- .. .+ -+..+...++..|+|+|+- +||..+.+++.++|
T Consensus 201 ~~~~v~~~~~~G~~v~~wTv--~~-----~~--n~~~~~~~l~~~GvdgI~T-------D~p~~~~~~l~~~~ 257 (258)
T 2o55_A 201 TKEQVCTAHEKGLSVTVWMP--WI-----FD--DSEEDWKKCLELQVDLICS-------NYPFGLMNFLSNIS 257 (258)
T ss_dssp CHHHHHHHHHTTCEEEEECC--TT-----CC--CCHHHHHHHHHHTCSEEEE-------SCHHHHHHHHTC--
T ss_pred CHHHHHHHHHCCCEEEEeeC--CC-----CC--CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHHhc
Confidence 36789999999999999872 00 11 1223445567789999875 69998888877665
No 459
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=24.75 E-value=1.1e+02 Score=26.56 Aligned_cols=41 Identities=20% Similarity=0.241 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------ChhHHHHHhccCCCCcEEEE
Q 008172 459 ICNCAVDMANNLGVDAIFVYTK---------HGHMASLLSRNRPNPPIFAF 500 (575)
Q Consensus 459 ia~~av~~a~~~~AkaIVVfT~---------SG~TAr~VSr~RP~~PIiAv 500 (575)
.+...++.|.+.+++.||+-+. -|.++..+.+.-| |||+.+
T Consensus 105 ~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~a~-~PVLvV 154 (155)
T 3dlo_A 105 PPDDIVDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILKAN-KPVICI 154 (155)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHHCS-SCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHhCC-CCEEEe
Confidence 4555667888999999888765 3778888888655 999876
No 460
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=24.70 E-value=5.8e+02 Score=26.12 Aligned_cols=118 Identities=16% Similarity=0.156 Sum_probs=64.2
Q ss_pred CCCccCHHHH--------HHHHHcCCCEEEecCc-------------CChh------------hHHHHHHHHhccCCCCc
Q 008172 262 TLSKKDWDDI--------EFGIAEGVDFIAMSFV-------------CDAD------------SVRHLKKYVSGKSSRSI 308 (575)
Q Consensus 262 ~lsekD~~di--------~~al~~gvd~I~~SfV-------------~sa~------------dv~~ir~~l~~~~~~~i 308 (575)
.||+.|++.+ +.|.+.|+|+|=+-.- +... -+.++.+.+.+.-+++
T Consensus 142 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~- 220 (362)
T 4ab4_A 142 ALETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQ- 220 (362)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCC-
Confidence 6888887766 4678899999977433 3221 1222222222221133
Q ss_pred eEEeeecCH---------HHHhcHHHHHhc-----CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHH-HcCCCEEEehhh
Q 008172 309 KVLAKIENL---------ESLQKFEEIVEA-----SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCR-QLNKPVIVASQL 373 (575)
Q Consensus 309 ~IIaKIEt~---------~av~nldeI~~~-----sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~-~~gKPvivaTq~ 373 (575)
.|..||=-. ...++.-++++. +|.|=+..|..+ .+ .++..+ ..+.|||.+..
T Consensus 221 ~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~----~~--------~~~~ik~~~~iPvi~~Gg- 287 (362)
T 4ab4_A 221 RVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSREREAD----DS--------IGPLIKEAFGGPYIVNER- 287 (362)
T ss_dssp GEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCCT----TC--------CHHHHHHHHCSCEEEESS-
T ss_pred ceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCCC----HH--------HHHHHHHHCCCCEEEeCC-
Confidence 677787321 112333333332 799988766522 11 122222 34789998643
Q ss_pred HHhhhcCCCCChhhHhhHHHHHHcc-cceEEec
Q 008172 374 LESMVEYPTPTRAEVADVSEAVRQY-ADALMLS 405 (575)
Q Consensus 374 LeSM~~~p~PtrAEv~Dv~nav~~G-~D~vmLs 405 (575)
. |++ +...++..| +|+|++.
T Consensus 288 --------i-t~e---~a~~~l~~g~aD~V~iG 308 (362)
T 4ab4_A 288 --------F-DKA---SANAALASGKADAVAFG 308 (362)
T ss_dssp --------C-CHH---HHHHHHHTTSCSEEEES
T ss_pred --------C-CHH---HHHHHHHcCCccEEEEC
Confidence 2 333 334566777 9999996
No 461
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=24.67 E-value=3.5e+02 Score=26.57 Aligned_cols=122 Identities=11% Similarity=0.108 Sum_probs=68.8
Q ss_pred HHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhh
Q 008172 355 IIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSRE 434 (575)
Q Consensus 355 ~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 434 (575)
-+...|+..|.++.+-. |..+....+...-..|++.+...++. .| -++.+...++.++-. +
T Consensus 81 alA~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~Ga~v~~~~~~~---~~-~~~~~~a~~l~~~~~-~--- 141 (313)
T 2q3b_A 81 ALAMVCAARGYRCVLTM-----------PETMSLERRMLLRAYGAELILTPGAD---GM-SGAIAKAEELAKTDQ-R--- 141 (313)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCT-T---
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEeCCCC---CH-HHHHHHHHHHHHhCC-C---
Confidence 36677899999998742 22222234455557899987776431 22 244444333322211 0
Q ss_pred hhhHHhhhcccccCCCCCCchhhH-HHHHHHHHHHhcC--CcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCcH
Q 008172 435 ENRQSALCGQRQLGESLHDRIAEQ-ICNCAVDMANNLG--VDAIFVYTKHGHMASLLSR----NRPNPPIFAFTNDD 504 (575)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~-ia~~av~~a~~~~--AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~~ 504 (575)
.+ ...+. ..+..+ .. ....+.++..+++ .+.||+.+-+|.|+--+++ ..|...|+++.+..
T Consensus 142 -----~~-~~~~~--~n~~~~-~~~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~ 209 (313)
T 2q3b_A 142 -----YF-VPQQF--ENPANP-AIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAA 209 (313)
T ss_dssp -----EE-CCCTT--TCTHHH-HHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETT
T ss_pred -----EE-eCCCC--CChhhH-HHHHHHHHHHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEeeCC
Confidence 01 01111 011111 11 2333667777763 6899999999998766655 46999999997654
No 462
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=24.28 E-value=1.6e+02 Score=26.89 Aligned_cols=47 Identities=13% Similarity=0.241 Sum_probs=35.6
Q ss_pred HHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEE
Q 008172 104 MEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMI 152 (575)
Q Consensus 104 ~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~ 152 (575)
.+.++.+.++|++.+-|.+...+.++..+.++.+++..+..+ +.+++
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~~--v~v~v 75 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYD--ALFFV 75 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTT--CEEEE
T ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcC--CeEEE
Confidence 578999999999999888777777777788888887655443 34444
No 463
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=24.28 E-value=89 Score=31.07 Aligned_cols=49 Identities=16% Similarity=0.232 Sum_probs=36.9
Q ss_pred HhcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhh
Q 008172 320 LQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQL 373 (575)
Q Consensus 320 v~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~ 373 (575)
.+-++|+++.+|++.|+.|=|. +.-.......++.++++++|+++---+
T Consensus 49 ~~e~~e~~~~a~alvIn~G~l~-----~~~~~~~~~a~~~a~~~~~PvVlDPVg 97 (273)
T 3dzv_A 49 PREFPQMFQQTSALVLNLGHLS-----QEREQSLLAASDYARQVNKLTVVDLVG 97 (273)
T ss_dssp GGGHHHHHTTCSEEEEECCSCC-----HHHHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred HHHHHHHHHHCCeEEEecCCCC-----hHHHHHHHHHHHHHHHcCCcEEEchhh
Confidence 4568888999999999988652 333455667778899999999985433
No 464
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=24.21 E-value=5.3e+02 Score=25.48 Aligned_cols=129 Identities=12% Similarity=0.161 Sum_probs=0.0
Q ss_pred CCccCHHHHHHHHHcCCCEEEec-------------CcCChhhHHHHHHHHhccCCCCceEEeeecC------HHHHhcH
Q 008172 263 LSKKDWDDIEFGIAEGVDFIAMS-------------FVCDADSVRHLKKYVSGKSSRSIKVLAKIEN------LESLQKF 323 (575)
Q Consensus 263 lsekD~~di~~al~~gvd~I~~S-------------fV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt------~~av~nl 323 (575)
+|--|.---+.+-+.|+|.|.+. --=+.+++..--+.+.+.. +...|++=++- .++++|.
T Consensus 22 ~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~-~~~~vvaD~pfgsy~~~~~a~~~a 100 (264)
T 1m3u_A 22 ITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGA-PNCLLLADLPFMAYATPEQAFENA 100 (264)
T ss_dssp EECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-TTSEEEEECCTTSSSSHHHHHHHH
T ss_pred EeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhC-CCCcEEEECCCCCcCCHHHHHHHH
Q ss_pred HHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEE----EehhhHHhh----hcCCCCChhh--HhhHH
Q 008172 324 EEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVI----VASQLLESM----VEYPTPTRAE--VADVS 392 (575)
Q Consensus 324 deI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvi----vaTq~LeSM----~~~p~PtrAE--v~Dv~ 392 (575)
.++++. +++|-+-=| ..+...|+++.++|.||+ +--|-...+ +..-...+++ +.|.-
T Consensus 101 ~rl~kaGa~aVklEgg------------~e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~ 168 (264)
T 1m3u_A 101 ATVMRAGANMVKIEGG------------EWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDAL 168 (264)
T ss_dssp HHHHHTTCSEEECCCS------------GGGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECCc------------HHHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHH
Q ss_pred HHHHcccceEEe
Q 008172 393 EAVRQYADALML 404 (575)
Q Consensus 393 nav~~G~D~vmL 404 (575)
.....|+|+++|
T Consensus 169 a~~eAGA~~ivl 180 (264)
T 1m3u_A 169 ALEAAGAQLLVL 180 (264)
T ss_dssp HHHHHTCCEEEE
T ss_pred HHHHCCCcEEEE
No 465
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=24.18 E-value=1.1e+02 Score=32.73 Aligned_cols=74 Identities=15% Similarity=0.200 Sum_probs=42.9
Q ss_pred CCCCccCHHHH-HHHHHcCCCEEEecCcCC------------------------hhhHHHHHHHHhccCCCCceEEe--e
Q 008172 261 PTLSKKDWDDI-EFGIAEGVDFIAMSFVCD------------------------ADSVRHLKKYVSGKSSRSIKVLA--K 313 (575)
Q Consensus 261 p~lsekD~~di-~~al~~gvd~I~~SfV~s------------------------a~dv~~ir~~l~~~~~~~i~IIa--K 313 (575)
|.+++.|...+ +.+.+.|+|+|.++.-.. .+-+.++++.+ + .++.||+ -
T Consensus 306 pd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v---~-~~iPVIg~GG 381 (443)
T 1tv5_A 306 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYT---N-KQIPIIASGG 381 (443)
T ss_dssp SCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHT---T-TCSCEEEESS
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHc---C-CCCcEEEECC
Confidence 34565565444 456789999999987421 12233333333 1 3466666 6
Q ss_pred ecCHHHHhcHHHHHhcCCEEEEeCCCC
Q 008172 314 IENLESLQKFEEIVEASDGIMVARGDL 340 (575)
Q Consensus 314 IEt~~av~nldeI~~~sDgImIaRGDL 340 (575)
|.+.+-. .+-|..=+|+++++|+=|
T Consensus 382 I~s~~DA--~e~l~aGAd~Vqigrall 406 (443)
T 1tv5_A 382 IFSGLDA--LEKIEAGASVCQLYSCLV 406 (443)
T ss_dssp CCSHHHH--HHHHHTTEEEEEESHHHH
T ss_pred CCCHHHH--HHHHHcCCCEEEEcHHHH
Confidence 7765433 233333389999998855
No 466
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=24.17 E-value=4.2e+02 Score=25.67 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=60.7
Q ss_pred CEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHH----HhcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHH
Q 008172 280 DFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLES----LQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEI 355 (575)
Q Consensus 280 d~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~a----v~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~ 355 (575)
..++.|| +.+.+..+++.. .++.+..-++.... -..+..+...++++-+... .+-+.
T Consensus 172 ~vii~SF--~~~~l~~~~~~~-----p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------------~~~~~ 232 (287)
T 2oog_A 172 HVMIQSF--SDESLKKIHRQN-----KHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYT------------DLTEQ 232 (287)
T ss_dssp SEEEEES--CHHHHHHHHHHC-----TTSCEEEEECTTTGGGCCHHHHHHHHTTCSEEEEBGG------------GCCHH
T ss_pred CEEEEeC--CHHHHHHHHHhC-----CCCcEEEEecCCcccccCHHHHHHHhhhheEEcccHh------------hcCHH
Confidence 4778888 777777777643 23333322322110 1223444444666543211 12357
Q ss_pred HHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHH
Q 008172 356 IIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVL 421 (575)
Q Consensus 356 Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m 421 (575)
.++.++++|++|.+-|- + + -.+...++..|+|+|+- +||..+.+++
T Consensus 233 ~v~~~~~~G~~v~~wTv------n----~---~~~~~~l~~~GVdgIiT-------D~P~~~~~~~ 278 (287)
T 2oog_A 233 NTHHLKDLGFIVHPYTV------N----E---KADMLRLNKYGVDGVFT-------NFADKYKEVI 278 (287)
T ss_dssp HHHHHHHTTCEECCBCC------C----S---HHHHHHHHHHTCSEEEE-------SCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeC------C----C---HHHHHHHHHcCCCEEEe-------CCHHHHHHHH
Confidence 88999999999998761 1 1 23456677899999974 6897665544
No 467
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=24.17 E-value=3.1e+02 Score=22.82 Aligned_cols=62 Identities=10% Similarity=0.222 Sum_probs=38.3
Q ss_pred HHHHHHhcCCcEEEEEcC----Chh-HHHHHhccCCCCcEEEEcCcHHHHHHhc-ccCC-cEEEEecCC
Q 008172 463 AVDMANNLGVDAIFVYTK----HGH-MASLLSRNRPNPPIFAFTNDDSTRMALN-LQWG-VIPVLVNLS 524 (575)
Q Consensus 463 av~~a~~~~AkaIVVfT~----SG~-TAr~VSr~RP~~PIiAvT~~~~~aR~L~-L~~G-V~Pvl~~~~ 524 (575)
|.....+...++|++-.. +|. ..+.+.+..|.+|||++|.......... +..| +.-++.++.
T Consensus 43 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~~l~kP~ 111 (154)
T 2rjn_A 43 ALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYADAQATIDAVNRGKISRFLLKPW 111 (154)
T ss_dssp HHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGGHHHHHHHHHTTCCSEEEESSC
T ss_pred HHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCCHHHHHHHHhccchheeeeCCC
Confidence 334445556787766432 443 4566666779999999998765333222 3344 877777654
No 468
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=24.15 E-value=1.6e+02 Score=28.80 Aligned_cols=39 Identities=10% Similarity=0.049 Sum_probs=29.3
Q ss_pred cCH-HHHHHHHHcCCCEEEecC----cC------ChhhHHHHHHHHhccC
Q 008172 266 KDW-DDIEFGIAEGVDFIAMSF----VC------DADSVRHLKKYVSGKS 304 (575)
Q Consensus 266 kD~-~di~~al~~gvd~I~~Sf----V~------sa~dv~~ir~~l~~~~ 304 (575)
.+. +.++.+.+.|+|+|=+.. +. +.+++.++++.+++.|
T Consensus 15 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 64 (340)
T 2zds_A 15 LPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYG 64 (340)
T ss_dssp SCHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcC
Confidence 444 457888999999998864 22 3456889999998876
No 469
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=24.12 E-value=4.1e+02 Score=25.82 Aligned_cols=143 Identities=16% Similarity=0.085 Sum_probs=0.0
Q ss_pred cccccccCcccccccccCCCCCccCH-HHHHHHHHcCCCEE-----EecCcCChhhHHHHHHHHhccCCCCceEEeeecC
Q 008172 243 AKLSFRRNGILVERNHGLPTLSKKDW-DDIEFGIAEGVDFI-----AMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIEN 316 (575)
Q Consensus 243 K~vn~~r~g~~~~~~~~lp~lsekD~-~di~~al~~gvd~I-----~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt 316 (575)
|++.+ +.-.|...+++..-|.+|. +.++.+...|+|.| .+.-+.+.+++.++-..++..- .+..+|.-+=+
T Consensus 11 ~~~~i--g~g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~-~~lPiI~T~Rt 87 (258)
T 4h3d_A 11 KNITI--GEGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYI-HDIPLLFTFRS 87 (258)
T ss_dssp TTEEE--TSSSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHC-TTSCEEEECCC
T ss_pred cCEEe--CCCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhc-CCCCEEEEEec
Q ss_pred H-----------HHHhcHHHHHhc--CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCC
Q 008172 317 L-----------ESLQKFEEIVEA--SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTP 383 (575)
Q Consensus 317 ~-----------~av~nldeI~~~--sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~P 383 (575)
. +-++-+.+++.. +|.|=| .+..-....+.+++.+++.|..+|++-|=++. .|
T Consensus 88 ~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDv---------El~~~~~~~~~l~~~a~~~~~kiI~S~Hdf~~-----TP 153 (258)
T 4h3d_A 88 VVEGGEKLISRDYYTTLNKEISNTGLVDLIDV---------ELFMGDEVIDEVVNFAHKKEVKVIISNHDFNK-----TP 153 (258)
T ss_dssp GGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEE---------EGGGCHHHHHHHHHHHHHTTCEEEEEEEESSC-----CC
T ss_pred hhhCCCCCCCHHHHHHHHHHHHhcCCchhhHH---------hhhccHHHHHHHHHHHHhCCCEEEEEEecCCC-----CC
Q ss_pred ChhhHhhHHH-HHHcccceE
Q 008172 384 TRAEVADVSE-AVRQYADAL 402 (575)
Q Consensus 384 trAEv~Dv~n-av~~G~D~v 402 (575)
+..|+...+. +...|+|-+
T Consensus 154 ~~~el~~~~~~~~~~gaDIv 173 (258)
T 4h3d_A 154 KKEEIVSRLCRMQELGADLP 173 (258)
T ss_dssp CHHHHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHhCCCEE
No 470
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=24.06 E-value=3.2e+02 Score=27.10 Aligned_cols=87 Identities=16% Similarity=0.172 Sum_probs=47.8
Q ss_pred CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHc---CCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEec
Q 008172 330 SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQL---NKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLS 405 (575)
Q Consensus 330 sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~---gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs 405 (575)
+|||++. |= .-|.+.-.. .-.+++++.+.+. ..||++-| ...+-+|..+.+. |-..|+|++|+.
T Consensus 47 v~gl~v~-Gt-TGE~~~Ls~-eEr~~v~~~~~~~~~grvpViaGv---------g~~~t~~ai~la~~A~~~Gadavlv~ 114 (301)
T 1xky_A 47 TTAIVVG-GT-TGESPTLTS-EEKVALYRHVVSVVDKRVPVIAGT---------GSNNTHASIDLTKKATEVGVDAVMLV 114 (301)
T ss_dssp CCEEEES-ST-TTTGGGSCH-HHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCEEEEC-cc-ccChhhCCH-HHHHHHHHHHHHHhCCCceEEeCC---------CCCCHHHHHHHHHHHHhcCCCEEEEc
Confidence 8999985 21 122222111 2233444444432 47898754 2445556655555 667799999997
Q ss_pred cCcCCCCCHHHHHHHHHHHHHHH
Q 008172 406 GESAIGPFGQKAVSVLQMASSRM 428 (575)
Q Consensus 406 ~ETa~G~yPveaV~~m~~I~~~a 428 (575)
.=--...-+.+.++..+.|++.+
T Consensus 115 ~P~y~~~s~~~l~~~f~~va~a~ 137 (301)
T 1xky_A 115 APYYNKPSQEGMYQHFKAIAEST 137 (301)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCHHHHHHHHHHHHHhc
Confidence 44322223455666666665544
No 471
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=24.06 E-value=2.4e+02 Score=27.68 Aligned_cols=120 Identities=8% Similarity=0.062 Sum_probs=63.0
Q ss_pred cCHHHHHHHHHcCCCEEEecCcCChhh--------HHHHHHHHhccC--CCCceEEeeecC---HHHHhcHHHHHhcCCE
Q 008172 266 KDWDDIEFGIAEGVDFIAMSFVCDADS--------VRHLKKYVSGKS--SRSIKVLAKIEN---LESLQKFEEIVEASDG 332 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~SfV~sa~d--------v~~ir~~l~~~~--~~~i~IIaKIEt---~~av~nldeI~~~sDg 332 (575)
.+.+.+..+...|+|+|++-+=....+ -..+.+.+.... .....++..|-. +...+++..++.-.||
T Consensus 17 ~~~~~~~~a~~~gaD~vilDlEdav~~~~~~k~~Ar~~v~~~l~~~~~~~~~~~~~VRv~~~~~~~~~~dl~~~l~g~~~ 96 (284)
T 1sgj_A 17 NRADLIAKLPRSAPDAVVIDLEDAVPGTAEAKAAARPVAHDAARDLIAAAPHLAVFVRVNALHSPYFEDDLSVLTPELSG 96 (284)
T ss_dssp TCHHHHHHTTTTCCSEEEEESSTTSCSSHHHHHHHHHHHHHHHHHHHHHSTTSEEEEECCCTTSTTHHHHGGGCCTTSSE
T ss_pred CCHHHHHHHHhCCCCEEEEECCCCCCCchhhHHHHHHHHHHHHHhcccccCCCeEEEEeCCCCCHhHHHHHHHHhccCCE
Confidence 456677778889999999976433333 223334443211 123567777753 4455555555554577
Q ss_pred EEEeCCCCCCCCCCCChHHHHHHHHHHHHHcC--CCEEEehhhHHhhhcCCCCChh-hHhhHHHHHHcccceEEec
Q 008172 333 IMVARGDLGVDIPLEQIPTVQEIIIHVCRQLN--KPVIVASQLLESMVEYPTPTRA-EVADVSEAVRQYADALMLS 405 (575)
Q Consensus 333 ImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~g--KPvivaTq~LeSM~~~p~PtrA-Ev~Dv~nav~~G~D~vmLs 405 (575)
||+ |.-+-+.--+.+.+.++..| .+++. |+|| |.-. .+.+++ -..++|++++.
T Consensus 97 i~l---------Pkv~s~~~v~~~~~~l~~~g~~~~i~~---~IEt------~~av~~~~eIa--~~~~vd~l~iG 152 (284)
T 1sgj_A 97 VVV---------PKLEMGAEARQVAQMLQERSLPLPILA---GLET------GAGVWNAREIM--EVPEVAWAYFG 152 (284)
T ss_dssp EEE---------CSCCSHHHHHHHHHHHHHTTCCCCEEE---EECS------HHHHHTHHHHH--TSTTEEEEEEC
T ss_pred EEe---------CCCCCHHHHHHHHHHHHhcCCCeEEEE---EecC------HHHHHHHHHHH--cCCCCcEEEEC
Confidence 777 44222222234555555543 45554 3333 1111 123332 13589999874
No 472
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=24.03 E-value=97 Score=29.39 Aligned_cols=68 Identities=12% Similarity=0.089 Sum_probs=40.3
Q ss_pred CH-HHHHHHHHcCCCEEEecCc-----CChhhHHHHHHHHhccCCCCceEEe--eecCHHHHhcHHHHHhc-CCEEEEeC
Q 008172 267 DW-DDIEFGIAEGVDFIAMSFV-----CDADSVRHLKKYVSGKSSRSIKVLA--KIENLESLQKFEEIVEA-SDGIMVAR 337 (575)
Q Consensus 267 D~-~di~~al~~gvd~I~~SfV-----~sa~dv~~ir~~l~~~~~~~i~IIa--KIEt~~av~nldeI~~~-sDgImIaR 337 (575)
|. +.++...+.|+|+|.++-. .....+..++++.+.. ++.+++ -|-+. +.+++.++. +|++++++
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~---~iPvi~~Ggi~~~---~~~~~~~~~Gad~V~lg~ 105 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAERV---FIPLTVGGGVRSL---EDARKLLLSGADKVSVNS 105 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTC---CSCEEEESSCCSH---HHHHHHHHHTCSEEEECH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhC---CCCEEEECCcCCH---HHHHHHHHcCCCEEEECh
Confidence 44 4455667899999877532 2334455555544322 345554 34333 355666665 89999987
Q ss_pred CCC
Q 008172 338 GDL 340 (575)
Q Consensus 338 GDL 340 (575)
..|
T Consensus 106 ~~l 108 (252)
T 1ka9_F 106 AAV 108 (252)
T ss_dssp HHH
T ss_pred HHH
Confidence 666
No 473
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=23.99 E-value=1.7e+02 Score=27.83 Aligned_cols=103 Identities=18% Similarity=0.217 Sum_probs=56.8
Q ss_pred cCHH-HHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeee------c-------CHHHHhcHHHHHhcCC
Q 008172 266 KDWD-DIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKI------E-------NLESLQKFEEIVEASD 331 (575)
Q Consensus 266 kD~~-di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKI------E-------t~~av~nldeI~~~sD 331 (575)
.|.+ .++.+.+.|++.++.+-. +.++...+.++.++.+ ..+....-| . +.+.++.+.+.+....
T Consensus 20 ~~~~~~l~~~~~~Gv~~~v~~~~-~~~~~~~~~~l~~~~~-~~i~~~~GihP~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 97 (272)
T 2y1h_A 20 RDLDDVLEKAKKANVVALVAVAE-HSGEFEKIMQLSERYN-GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYK 97 (272)
T ss_dssp TTHHHHHHHHHHTTEEEEEECCS-SGGGHHHHHHHHHHTT-TTEEEEECCCSBC-------CBCCHHHHHHHHHHHHHHG
T ss_pred cCHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHHCC-CCEEEEEEECCCccccccccccCCHHHHHHHHHHHHhCC
Confidence 3443 356677899999777643 4677777777655432 222222111 1 2234455544444211
Q ss_pred EEEEeCCCCCCCCC--CCC---hHHHHH----HHHHHHHHcCCCEEEe
Q 008172 332 GIMVARGDLGVDIP--LEQ---IPTVQE----IIIHVCRQLNKPVIVA 370 (575)
Q Consensus 332 gImIaRGDLg~e~~--~e~---v~~~Qk----~Ii~~c~~~gKPviva 370 (575)
.-.+|=|..|+++. ... ....|+ ..++.|.+.|+||++=
T Consensus 98 ~~~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH 145 (272)
T 2y1h_A 98 DRLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVH 145 (272)
T ss_dssp GGCSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCEEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 11233377777762 111 235554 6778899999999973
No 474
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=23.96 E-value=50 Score=34.76 Aligned_cols=295 Identities=14% Similarity=0.171 Sum_probs=149.7
Q ss_pred CceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCH------HHHHHHHHHHHHHhhhcCCceEEEEeCC-CCeEEEE
Q 008172 90 KTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTR------EWHLDVIRKIKQLNHEKLFCISVMIDTE-GSQIHVV 162 (575)
Q Consensus 90 ~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~------e~~~~~i~~ir~~~~~~~~~i~Il~Dl~-GpkIRtG 162 (575)
.|+|-+++ .+|+.|++.|..|.= +||-.. +....+-.-.+.+++-+|++|...-|.- |
T Consensus 34 d~RI~aal-------pTI~~ll~~gakvil--~SHlGRP~kG~~~~~~SL~pva~~L~~lLg~~V~f~~d~~~G------ 98 (387)
T 1zmr_A 34 DARIRASL-------PTIELALKQGAKVMV--TSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------ 98 (387)
T ss_dssp CHHHHHHH-------HHHHHHHHTTCEEEE--ECCCSSCBTTBCCGGGCSHHHHHHHHHHCSSCEEEESCCTTC------
T ss_pred hHHHHHHH-------HHHHHHHHCCCEEEE--EccCCCCCCCCcCCccCHHHHHHHHHHHhCCCCEECcccccC------
Confidence 56666664 589999999998754 588542 2222233334455677899998887876 6
Q ss_pred ecCCCCceEEecCCEEEEEeeccCCCCCcEEEecccccccccCCCCEEEEeCCeeEEEEEEEECCeEEEEEecCeEecCC
Q 008172 163 DHGEPNSVKVEEDSIWLFTAIKFEGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPR 242 (575)
Q Consensus 163 ~~~~~~~i~l~~G~~v~lt~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~~~~i~~~V~~gG~l~s~ 242 (575)
+.+++|+.+.|.+-.+...... |.++|.+.+..--.||++|.-= ..|
T Consensus 99 -------v~l~~G~VlLLEN~RF~~~E~~----nd~~fa~~LA~l~DvyVNDAFg----------------------taH 145 (387)
T 1zmr_A 99 -------VDVAEGELVVLENVRFNKGEKK----DDETLSKKYAALCDVFVMDAFG----------------------TAH 145 (387)
T ss_dssp -------CCCCTTCEEEECCGGGSTTTTT----TCHHHHHHHHHTCSEEEECCGG----------------------GTT
T ss_pred -------ccCCCCeEEEEcccCCCcchhc----CCHHHHHHHHhhCCEEEecccc----------------------ccc
Confidence 1267899988876554432211 4456777666644588888411 011
Q ss_pred cccccccCcccccccccCCCCCccCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEE--eeecCHHHH
Q 008172 243 AKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVL--AKIENLESL 320 (575)
Q Consensus 243 K~vn~~r~g~~~~~~~~lp~lsekD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~II--aKIEt~~av 320 (575)
+. -....|...-+|. . ++.|. =..++..+.+.+..-...-+.|+ ||+.+.-++
T Consensus 146 Ra-----haS~~gi~~~lp~-----------------~--~aG~L-m~kEl~~l~k~l~~p~rP~vaIlGGaKVsdKi~v 200 (387)
T 1zmr_A 146 RA-----QASTHGIGKFADV-----------------A--CAGPL-LAAELDALGKALKEPARPMVAIVGGSKVSTKLTV 200 (387)
T ss_dssp SC-----CCCCCCHHHHSSE-----------------E--EECHH-HHHHHHHHHHHHSSCSSSEEEEEEESCTTTTHHH
T ss_pred cc-----cCchhhhhhhCch-----------------h--hccHH-HHHHHHHHHHHhcCCCCCeEEEEcCcchhhHHHH
Confidence 00 0000111111220 0 11111 13466677776653211112333 577765555
Q ss_pred hcHHHHHhcCCEEEEeCC-------CCCCCCC----CCChHHHHHHHHHHHHHcCCC--EEEehhhHHhhhcCCCCChhh
Q 008172 321 QKFEEIVEASDGIMVARG-------DLGVDIP----LEQIPTVQEIIIHVCRQLNKP--VIVASQLLESMVEYPTPTRAE 387 (575)
Q Consensus 321 ~nldeI~~~sDgImIaRG-------DLg~e~~----~e~v~~~Qk~Ii~~c~~~gKP--vivaTq~LeSM~~~p~PtrAE 387 (575)
|+.+++-+|.++||=| =.|.++| -++....-++++++ .+.--| +.+|...= ...+++
T Consensus 201 --i~nLl~kvD~liiGGgma~tFl~A~G~~iG~Sl~E~d~~~~a~~ll~~-~~i~lPvD~vva~~f~-----~~~~~~-- 270 (387)
T 1zmr_A 201 --LDSLSKIADQLIVGGGIANTFIAAQGHDVGKSLYEADLVDEAKRLLTT-CNIPVPSDVRVATEFS-----ETAPAT-- 270 (387)
T ss_dssp --HHHHHTTCSEEEEEEHHHHHHHHHTTCCCTTCSCCGGGHHHHHHHHTT-SCCCCCSEEEEESSSS-----SSCCCE--
T ss_pred --HHHHHHhcCEEEeCcHHHHHHHHHcCCCCCccccchhhHHHHHHHHHh-CCccCCccceeeeccC-----CCCceE--
Confidence 8888888999999843 1244444 34555555566665 233444 44443210 011111
Q ss_pred HhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHhhhcccccCCCCCCchhhHHHHHHHHHH
Q 008172 388 VADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMA 467 (575)
Q Consensus 388 v~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a 467 (575)
+.++ +.+- .|...|. +|. ++++...+++..|...+..-. +.-...+....-+.+++.+..+.
T Consensus 271 ~~~~-~~ip--~~~m~lD----iGp---~T~~~~~~~i~~akTivWNGP-------mGvFE~~~Fa~GT~~va~aia~~- 332 (387)
T 1zmr_A 271 LKSV-NDVK--ADEQILD----IGD---ASAQELAEILKNAKTILWNGP-------VGVFEFPNFRKGTEIVANAIADS- 332 (387)
T ss_dssp EEEG-GGCC--TTCEEEE----ECH---HHHHHHHHHHHHCSEEEEESC-------SBCTTSGGGCHHHHHHHHHHHHS-
T ss_pred Eeeh-hhCC--CCCEEee----cCH---HHHHHHHHHHhhCCEEEEECC-------cccccCchHHHHHHHHHHHHHhc-
Confidence 1221 1111 2344444 452 677778888877776433221 00000011123345555555442
Q ss_pred HhcCCcEEEEEcCChhHHHHHhcc
Q 008172 468 NNLGVDAIFVYTKHGHMASLLSRN 491 (575)
Q Consensus 468 ~~~~AkaIVVfT~SG~TAr~VSr~ 491 (575)
++ +.+---|.|+..+.++
T Consensus 333 ---~~---~sivGGGDt~aav~~~ 350 (387)
T 1zmr_A 333 ---EA---FSIAGGGDTLAAIDLF 350 (387)
T ss_dssp ---SS---EEEECSHHHHHHHHHH
T ss_pred ---CC---eEEECCHHHHHHHHHc
Confidence 33 3333467888877664
No 475
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=23.86 E-value=1e+02 Score=32.68 Aligned_cols=50 Identities=16% Similarity=0.165 Sum_probs=38.1
Q ss_pred CHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeCC
Q 008172 103 SMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTE 155 (575)
Q Consensus 103 ~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~ 155 (575)
+.+++++|.++|.++.|+-.- + ++..+.+..||+--...+.++++..|+.
T Consensus 40 Tv~QI~~L~~aG~eiVRvaVp--~-~~~A~al~~I~~~l~~~~~~vPLVADiH 89 (406)
T 4g9p_A 40 TTAQVLELHRAGSEIVRLTVN--D-EEAAKAVPEIKRRLLAEGVEVPLVGDFH 89 (406)
T ss_dssp HHHHHHHHHHHTCSEEEEECC--S-HHHHHHHHHHHHHHHHTTCCCCEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEecC--C-HHHHHhHHHHHHHHHhcCCCCceEeeec
Confidence 477899999999999998643 3 3445667777765555678899999974
No 476
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=23.84 E-value=2.5e+02 Score=26.83 Aligned_cols=105 Identities=13% Similarity=-0.019 Sum_probs=63.6
Q ss_pred CEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCH----HHHhcHHHHHhc--CCEEEEeCCCCCCCCCCCChHHHH
Q 008172 280 DFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENL----ESLQKFEEIVEA--SDGIMVARGDLGVDIPLEQIPTVQ 353 (575)
Q Consensus 280 d~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~----~av~nldeI~~~--sDgImIaRGDLg~e~~~e~v~~~Q 353 (575)
..++.|| +.+.+.++++.. .++.+ +-+... .++..+-+.+.. +|.+-.. ...+-
T Consensus 134 ~v~~~SF--~~~~l~~~~~~~-----p~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 193 (250)
T 3ks6_A 134 RTTFSSF--LLASMDELWKAT-----TRPRL-WLVSPSVLQQLGPGAVIETAIAHSIHEIGVH------------IDTAD 193 (250)
T ss_dssp GEEEEES--CHHHHHHHHHHC-----CSCEE-EEECHHHHHHHHHHHHHHHHHHTTCCEEEEE------------GGGCC
T ss_pred CEEEEeC--CHHHHHHHHHHC-----CCCcE-EEEecccccccchhHHHHHHHhcCCCEEecc------------hhhCC
Confidence 5788888 677788887743 23332 222221 122223233333 3444332 11234
Q ss_pred HHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHH
Q 008172 354 EIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMA 424 (575)
Q Consensus 354 k~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I 424 (575)
+..++.|+++|++|.+=| .-+. .+...++..|+|+|+- +||..+.+++.++
T Consensus 194 ~~~v~~~~~~G~~V~~WT----------vn~~---~~~~~l~~~GVDgIiT-------D~P~~~~~~~~~~ 244 (250)
T 3ks6_A 194 AGLMAQVQAAGLDFGCWA----------AHTP---SQITKALDLGVKVFTT-------DRPTLAIALRTEH 244 (250)
T ss_dssp HHHHHHHHHTTCEEEEEC----------CCSH---HHHHHHHHHTCSEEEE-------SCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEe----------CCCH---HHHHHHHHcCCCEEEc-------CCHHHHHHHHHHh
Confidence 688999999999999876 1122 3456677899999985 6898887776654
No 477
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=23.79 E-value=1.6e+02 Score=29.46 Aligned_cols=84 Identities=20% Similarity=0.212 Sum_probs=54.3
Q ss_pred HhcHHHHHhc---CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCC-CCChhhHhhHHHHH
Q 008172 320 LQKFEEIVEA---SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYP-TPTRAEVADVSEAV 395 (575)
Q Consensus 320 v~nldeI~~~---sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p-~PtrAEv~Dv~nav 395 (575)
..+++++++. .|.++|+ .| +..-..++.+|-++||+|++ ++| ..+.+|..++..+.
T Consensus 69 ~~~~~~ll~~~~~vD~V~i~-------tp----~~~H~~~~~~al~aGkhVl~---------EKP~a~~~~e~~~l~~~a 128 (330)
T 4ew6_A 69 YTTIEAMLDAEPSIDAVSLC-------MP----PQYRYEAAYKALVAGKHVFL---------EKPPGATLSEVADLEALA 128 (330)
T ss_dssp ESSHHHHHHHCTTCCEEEEC-------SC----HHHHHHHHHHHHHTTCEEEE---------CSSSCSSHHHHHHHHHHH
T ss_pred cCCHHHHHhCCCCCCEEEEe-------CC----cHHHHHHHHHHHHcCCcEEE---------eCCCCCCHHHHHHHHHHH
Confidence 4578888876 8999996 23 45567888999999999997 455 56888888877755
Q ss_pred HcccceEEeccCcCCCCCHHHHHHHHHHHHHH
Q 008172 396 RQYADALMLSGESAIGPFGQKAVSVLQMASSR 427 (575)
Q Consensus 396 ~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 427 (575)
... ...+.-+..... +| +++.+++++.+
T Consensus 129 ~~~-g~~~~v~~~~r~-~p--~~~~~k~~i~~ 156 (330)
T 4ew6_A 129 NKQ-GASLFASWHSRY-AP--AVEAAKAFLAS 156 (330)
T ss_dssp HHH-TCCEEECCGGGG-ST--THHHHHHHHHS
T ss_pred Hhc-CCeEEEEehhhc-cH--HHHHHHHHHhc
Confidence 432 223333333222 23 45556666543
No 478
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=23.71 E-value=2.9e+02 Score=27.92 Aligned_cols=94 Identities=14% Similarity=0.080 Sum_probs=51.0
Q ss_pred HHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHc---CCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcc
Q 008172 324 EEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQL---NKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQY 398 (575)
Q Consensus 324 deI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~---gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G 398 (575)
+..++. +|||++. |= .-|.+.-.. .-.+++++.+.+. ..|||+-| ...+-+|..+.+. |-..|
T Consensus 62 ~~li~~Gv~Gl~v~-Gt-TGE~~~Ls~-eEr~~vi~~~ve~~~grvpViaGv---------g~~st~eai~la~~A~~~G 129 (332)
T 2r8w_A 62 ARLDAAEVDSVGIL-GS-TGIYMYLTR-EERRRAIEAAATILRGRRTLMAGI---------GALRTDEAVALAKDAEAAG 129 (332)
T ss_dssp HHHHHHTCSEEEES-ST-TTTGGGSCH-HHHHHHHHHHHHHHTTSSEEEEEE---------CCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCEEEEC-cc-ccChhhCCH-HHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHHHHHHHHHHhcC
Confidence 333444 8999985 21 112222111 1233444444432 47888754 2445556666555 66679
Q ss_pred cceEEeccCcCCCCCHHHHHHHHHHHHHHHh
Q 008172 399 ADALMLSGESAIGPFGQKAVSVLQMASSRME 429 (575)
Q Consensus 399 ~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 429 (575)
+|++|+..=--...-+-+.++..+.|++.+.
T Consensus 130 adavlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 130 ADALLLAPVSYTPLTQEEAYHHFAAVAGATA 160 (332)
T ss_dssp CSEEEECCCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999997433222234556667777765554
No 479
>3vab_A Diaminopimelate decarboxylase 1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: LLP; 2.10A {Brucella melitensis BV}
Probab=23.59 E-value=1.7e+02 Score=30.76 Aligned_cols=73 Identities=21% Similarity=0.264 Sum_probs=43.4
Q ss_pred cccccccccccchhhhhh---cccCCCCCceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHh
Q 008172 65 KHGLSLGFDAVSEGELRE---KGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLN 141 (575)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~---~~~~~~r~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~ 141 (575)
+.++ .|+..|.+|+.. .|+. ..+|+.+ ||. .+++.|+..++.|+.+ +|+.. .++. +.+.++.
T Consensus 95 ~~G~--g~dvaS~~E~~~~~~~G~~---~~~I~~~-g~~-k~~~ei~~a~~~gv~~--~~vds--~~el----~~l~~~a 159 (443)
T 3vab_A 95 KLGA--GADTVSQGEIRRALAAGIP---ANRIVFS-GVG-KTPREMDFALEAGIYC--FNVES--EPEL----EILSARA 159 (443)
T ss_dssp HTTC--EEEESSHHHHHHHHHTTCC---GGGEEEE-CTT-CCHHHHHHHHHHTCSE--EEECC--HHHH----HHHHHHH
T ss_pred HcCC--cEEEeCHHHHHHHHHcCCC---hhhEEEc-CCC-CCHHHHHHHHHCCCCE--EEECC--HHHH----HHHHHHH
Confidence 5566 555555555443 4553 3567775 774 5688999999999873 55433 3333 3444555
Q ss_pred hhcCCceEEEE
Q 008172 142 HEKLFCISVMI 152 (575)
Q Consensus 142 ~~~~~~i~Il~ 152 (575)
++.+.+..+++
T Consensus 160 ~~~~~~~~V~l 170 (443)
T 3vab_A 160 VAAGKVAPVSL 170 (443)
T ss_dssp HHHTCCEEEEE
T ss_pred HhcCCCceEEE
Confidence 55565555554
No 480
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=23.53 E-value=2.2e+02 Score=28.68 Aligned_cols=68 Identities=10% Similarity=0.235 Sum_probs=38.0
Q ss_pred HHHHHHHHHcCCCEEEecCcCC--hhhHHHHHHHHhc----cCCCCceEEeee---cCHHHHhcHHHHHhcC---CEEEE
Q 008172 268 WDDIEFGIAEGVDFIAMSFVCD--ADSVRHLKKYVSG----KSSRSIKVLAKI---ENLESLQKFEEIVEAS---DGIMV 335 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~s--a~dv~~ir~~l~~----~~~~~i~IIaKI---Et~~av~nldeI~~~s---DgImI 335 (575)
.+.+..+...|+|+|++-.=.. +.+..++|+.+.. .......++..| +++...+.+..++..- ||||+
T Consensus 56 p~~~eka~~~gaD~vilDLEDaV~~~~k~~Ar~~l~~~l~~~~~~~~~~~VRVn~~~t~~~~~Dl~~~l~~g~~~~gIvl 135 (316)
T 3qll_A 56 SDRFAKAAENGADVAIIDLEDSVSQADKEQARQKAISYLSSRPATSLPLALRINGLDTRAGIEDIHALLECGSLPDYLVL 135 (316)
T ss_dssp ----------CCSEEEEECSTTSCGGGHHHHHHHHHC---------CCEEEECCCTTSHHHHHHHHHHHHSCCCCSEEEE
T ss_pred HHHHHHHhhCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHhcccccCCeEEEEECCCCCchhHHHHHHHHhCCCCCCEEEe
Confidence 4445567778999999866444 4566666655432 111235788888 4566778888888763 99998
No 481
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=23.49 E-value=3.8e+02 Score=27.29 Aligned_cols=62 Identities=15% Similarity=0.238 Sum_probs=39.9
Q ss_pred CceEEEec-CCCCCCHHHH----HHHHHc-CCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeC
Q 008172 90 KTKMVCTI-GPACCSMEDL----EKLAMG-GMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDT 154 (575)
Q Consensus 90 ~tkIi~Ti-GPas~~~e~l----~~li~~-G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl 154 (575)
+...-+|+ |....+++.+ +++++. |.+.+.+.+...+.++-.+.++.+|+ ..|..+.+++|.
T Consensus 137 ~v~~y~s~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~---~~g~~~~l~vDa 204 (372)
T 3tj4_A 137 GVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRE---RVDSAVRIAIDG 204 (372)
T ss_dssp CEEEEECTTCCTTSCHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHH---HSCTTCEEEEEC
T ss_pred CeEEEEecCCccCCCHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHH---HcCCCCcEEeeC
Confidence 36677874 3333355433 467778 99999999987666665566666664 444456666665
No 482
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=23.45 E-value=2.4e+02 Score=27.51 Aligned_cols=68 Identities=6% Similarity=0.128 Sum_probs=44.4
Q ss_pred CHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc-CCEEEE
Q 008172 267 DWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA-SDGIMV 335 (575)
Q Consensus 267 D~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~-sDgImI 335 (575)
+.+.++.+...|+|||++-.=..+.+-.+++.++.........++..|=..+ -..+..++.. +|+||+
T Consensus 28 ~p~~~e~a~~~GaD~v~lDlE~~~~~~~~~~~~~~a~~~~~~~~~VRv~~~~-~~~i~~~l~~g~~~I~~ 96 (267)
T 2vws_A 28 TAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGS-KPLIKQVLDIGAQTLLI 96 (267)
T ss_dssp CHHHHHHHHTTCCSEEEEETTTSCCCHHHHHHHHHHHTTSSSEEEEECSSCC-HHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEeCCCC-HHHHHHHHHhCCCEEEe
Confidence 6778888999999999997655555556666665432212356777774222 2345566665 799998
No 483
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=23.32 E-value=4.4e+02 Score=25.52 Aligned_cols=125 Identities=19% Similarity=0.273 Sum_probs=71.9
Q ss_pred HHHHHHHHcCCCEEEec-C------cCChhhHHH----HHHHHhccCCCCceEEeeec---CHHHHhcHHH--HH--hcC
Q 008172 269 DDIEFGIAEGVDFIAMS-F------VCDADSVRH----LKKYVSGKSSRSIKVLAKIE---NLESLQKFEE--IV--EAS 330 (575)
Q Consensus 269 ~di~~al~~gvd~I~~S-f------V~sa~dv~~----ir~~l~~~~~~~i~IIaKIE---t~~av~nlde--I~--~~s 330 (575)
+.++.|.+.|++.|+++ + .++.+++.+ +++..++.+ ..+.|..=+| .++..+.+++ ++ .-+
T Consensus 24 ~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~-~~i~I~~G~Ev~~~~~~~~~l~~~~~~~l~~~ 102 (262)
T 3qy7_A 24 EMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKED-IPLHVLPGQEIRIYGEVEQDLAKRQLLSLNDT 102 (262)
T ss_dssp HHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTT-CCCEEECCCEEECCTTHHHHHHTTCSCCGGGS
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcC-CCCEEecCeEEecchhHHHHHhcCCCcEECCc
Confidence 36888999999999763 2 234444443 444444333 3577877776 3445555544 22 225
Q ss_pred CEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhh-----HhhHHHHHHcccceEEec
Q 008172 331 DGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAE-----VADVSEAVRQYADALMLS 405 (575)
Q Consensus 331 DgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAE-----v~Dv~nav~~G~D~vmLs 405 (575)
|.+++ |+|...++....+++....++|--.|+| .|+|-. ...+..++..|+ ++=++
T Consensus 103 ~~vl~-------e~~~~~~~~~~~~~l~~i~~~g~v~ILA-----------HPeRy~~~~~~~~~l~~l~~~G~-~iEiN 163 (262)
T 3qy7_A 103 KYILI-------EFPFDHVPRYAEQLFYDLQLKGYIPVIA-----------HPERNREIRENPSLLYHLVEKGA-ASQIT 163 (262)
T ss_dssp SEEEE-------ECCTTCCCTTHHHHHHHHHHTTCEEEEE-----------CGGGCHHHHHCTHHHHHHHHTTC-EEEEE
T ss_pred eEEEE-------eCCCccCHHHHHHHHHHHHHCCCcEEEE-----------CCCccccccccHHHHHHHHHCCC-EEEEE
Confidence 76666 4555555555666666666666544444 676532 123566778885 45555
Q ss_pred cCcCCCCC
Q 008172 406 GESAIGPF 413 (575)
Q Consensus 406 ~ETa~G~y 413 (575)
.-.-.|.|
T Consensus 164 ~~s~~g~~ 171 (262)
T 3qy7_A 164 SGSLAGIF 171 (262)
T ss_dssp HHHHHTTT
T ss_pred CCccCccc
Confidence 44334544
No 484
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=23.14 E-value=3.3e+02 Score=25.44 Aligned_cols=65 Identities=6% Similarity=-0.103 Sum_probs=37.1
Q ss_pred CCcEEEEEcCChhHHHHH------hccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecCCCCHHHHHHHHHHHHHH
Q 008172 471 GVDAIFVYTKHGHMASLL------SRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKM 540 (575)
Q Consensus 471 ~AkaIVVfT~SG~TAr~V------Sr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~~~~ 540 (575)
+.++|++.+ ..+|..+ +..+ ...|+++-..+.....+ ..|..|.+..-..+.+++-+.|++.+.+
T Consensus 191 ~~~ai~~~~--d~~a~g~~~al~~~g~~-di~vvg~d~~~~~~~~i--~~~~~p~lttv~~~~~~~g~~av~~l~~ 261 (291)
T 3l49_A 191 DVGAIWACW--DVPMIGATQALQAAGRT-DIRTYGVDGSPEFVEMV--ADPESPAGAVAAQQPSEIGKLAVQNVAR 261 (291)
T ss_dssp SCCEEEESS--HHHHHHHHHHHHHTTCC-SCEEEEEECCHHHHHHH--HCTTSCEEEEEECCHHHHHHHHHHHHHH
T ss_pred CcCEEEECC--CchHHHHHHHHHHcCCC-CeEEEEecCCHHHHHHH--HCCCCCeEEEEecCHHHHHHHHHHHHHH
Confidence 578876654 4443322 2244 78899887776665554 3455555544445566666666655544
No 485
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=23.08 E-value=2.8e+02 Score=28.26 Aligned_cols=88 Identities=14% Similarity=0.201 Sum_probs=48.2
Q ss_pred CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHH---cCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEec
Q 008172 330 SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQ---LNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLS 405 (575)
Q Consensus 330 sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~---~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs 405 (575)
+|||++. |= .-|.+.-.. .-.+++++.+.+ -..|||+-| ...+-+|..+.+. |-..|+|++|+.
T Consensus 66 v~Gl~v~-Gt-TGE~~~Ls~-eEr~~vi~~~ve~~~grvpViaGv---------g~~st~eai~la~~A~~~Gadavlv~ 133 (343)
T 2v9d_A 66 VDGLFFL-GS-GGEFSQLGA-EERKAIARFAIDHVDRRVPVLIGT---------GGTNARETIELSQHAQQAGADGIVVI 133 (343)
T ss_dssp CSCEEES-ST-TTTGGGSCH-HHHHHHHHHHHHHHTTSSCEEEEC---------CSSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCEEEeC-cc-ccChhhCCH-HHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 8999884 21 112222111 122344444443 247898754 3455666666555 566799999997
Q ss_pred cCcCCCCCHHHHHHHHHHHHHHHh
Q 008172 406 GESAIGPFGQKAVSVLQMASSRME 429 (575)
Q Consensus 406 ~ETa~G~yPveaV~~m~~I~~~aE 429 (575)
.=--...-+.+.++..+.|++.++
T Consensus 134 ~P~Y~~~s~~~l~~~f~~VA~a~~ 157 (343)
T 2v9d_A 134 NPYYWKVSEANLIRYFEQVADSVT 157 (343)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHTCS
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcC
Confidence 433222234556666677765443
No 486
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=23.04 E-value=1.4e+02 Score=29.34 Aligned_cols=52 Identities=13% Similarity=0.260 Sum_probs=32.0
Q ss_pred CHHHHHHHHHcCCcEEEeeCCC---------CCH-HHHHHHHHHHHHHhhhcCCceEEEEeCCC
Q 008172 103 SMEDLEKLAMGGMNVARLNMCH---------NTR-EWHLDVIRKIKQLNHEKLFCISVMIDTEG 156 (575)
Q Consensus 103 ~~e~l~~li~~G~~v~RlN~SH---------g~~-e~~~~~i~~ir~~~~~~~~~i~Il~Dl~G 156 (575)
+.+.++.|-+.|+|++|+-++. +.. +...+.++.+=+...+.| +.+++|+-+
T Consensus 43 ~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G--i~vildlh~ 104 (320)
T 3nco_A 43 EDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKND--LVVIINCHH 104 (320)
T ss_dssp CHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTT--CEEEEECCC
T ss_pred CHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEEcCC
Confidence 5899999999999999997642 221 112223333223333344 567888865
No 487
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=23.01 E-value=32 Score=36.13 Aligned_cols=35 Identities=26% Similarity=0.206 Sum_probs=30.3
Q ss_pred hcCCcEEEEEcCChhHHHHHhc----cCCCCcEEEEcCc
Q 008172 469 NLGVDAIFVYTKHGHMASLLSR----NRPNPPIFAFTND 503 (575)
Q Consensus 469 ~~~AkaIVVfT~SG~TAr~VSr----~RP~~PIiAvT~~ 503 (575)
+..++.+||-|.||+||-.+|. ..|..+.+.+||=
T Consensus 226 ~~~~DGliVsTPTGSTAYslSAGGpIv~P~~~~~~ltPI 264 (388)
T 3afo_A 226 RTTADGVALATPTGSTAYSLSAGGSIVSPLVPAILMTPI 264 (388)
T ss_dssp EEEEEEEEEECTGGGGTHHHHTTCCEECTTSCEEEEEEE
T ss_pred eecCCeEEEeCCCcHHHHHHhccCCcccCCCCceEEeee
Confidence 4578999999999999999997 6788888888864
No 488
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=22.99 E-value=1.3e+02 Score=24.38 Aligned_cols=66 Identities=17% Similarity=0.228 Sum_probs=39.4
Q ss_pred CcEEEEEcC----Chh-HHHHHhccCCCCcEEEEcCcHHH------HHHhcccCCcEEEEecCCCCHHHHHHHHHHHHH
Q 008172 472 VDAIFVYTK----HGH-MASLLSRNRPNPPIFAFTNDDST------RMALNLQWGVIPVLVNLSDDMETNIAKTIDLIK 539 (575)
Q Consensus 472 AkaIVVfT~----SG~-TAr~VSr~RP~~PIiAvT~~~~~------aR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~~~ 539 (575)
.++|++-.. +|. ..+.+.+..|..||+.+|....- .....+..|+.-++.++.. .++ +..++..+.
T Consensus 47 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~~~~~g~~~~l~KP~~-~~~-l~~~l~~~~ 123 (135)
T 3eqz_A 47 QDIIILDLMMPDMDGIEVIRHLAEHKSPASLILISGYDSGVLHSAETLALSCGLNVINTFTKPIN-TEV-LTCFLTSLS 123 (135)
T ss_dssp TEEEEEECCTTTTHHHHHHHHHHHTTCCCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEESSCC-HHH-HHHHHHHHS
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhCCCCCCEEEEEeccchhHHHHHHHHHHcCCCcceeeCCCCC-HHH-HHHHHHHHH
Confidence 565555432 232 45566667799999999987652 2222567788888876553 333 344444443
No 489
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=22.94 E-value=85 Score=31.75 Aligned_cols=49 Identities=12% Similarity=0.254 Sum_probs=41.4
Q ss_pred ccCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeee
Q 008172 265 KKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKI 314 (575)
Q Consensus 265 ekD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKI 314 (575)
+.|.+.++.=+++|+||++--++-+++...++++.++..| -++.|++=|
T Consensus 163 ~~d~~~Lk~KvdAGAdf~iTQ~ffD~~~~~~f~~~~r~~G-i~vPIi~GI 211 (304)
T 3fst_A 163 QADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAG-IDVEIIPGI 211 (304)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCSCHHHHHHHHHHHHHTT-CCSCEECEE
T ss_pred HHHHHHHHHHHHcCCCEEEeCccCCHHHHHHHHHHHHhcC-CCCcEEEEe
Confidence 3577788888999999999999999999999999998776 456777765
No 490
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=22.92 E-value=2.7e+02 Score=27.89 Aligned_cols=87 Identities=15% Similarity=0.167 Sum_probs=49.3
Q ss_pred CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHc--CCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEecc
Q 008172 330 SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQL--NKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLSG 406 (575)
Q Consensus 330 sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~--gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs~ 406 (575)
+|||++. |= .-|.+.-. ..-.+++++.+.+. ..|||+-| ...+-+|..+.+. |-..|+|++|+..
T Consensus 43 v~Gl~v~-Gt-TGE~~~Lt-~~Er~~v~~~~v~~~grvpViaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~ 110 (313)
T 3dz1_A 43 CEGVTVL-GI-LGEAPKLD-AAEAEAVATRFIKRAKSMQVIVGV---------SAPGFAAMRRLARLSMDAGAAGVMIAP 110 (313)
T ss_dssp CSEEEES-TG-GGTGGGSC-HHHHHHHHHHHHHHCTTSEEEEEC---------CCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCEEEeC-cc-CcChhhCC-HHHHHHHHHHHHHHcCCCcEEEec---------CCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 8999985 21 12222211 12233455555443 57888754 3455566666554 6677999999963
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHh
Q 008172 407 ESAIGPFGQKAVSVLQMASSRME 429 (575)
Q Consensus 407 ETa~G~yPveaV~~m~~I~~~aE 429 (575)
=- .-.-+.+.++..+.|++.+.
T Consensus 111 P~-~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 111 PP-SLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp CT-TCCSHHHHHHHHHHHHHHHC
T ss_pred CC-CCCCHHHHHHHHHHHHHhCC
Confidence 32 11223566667777776664
No 491
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=22.86 E-value=1.7e+02 Score=29.34 Aligned_cols=84 Identities=14% Similarity=0.105 Sum_probs=53.9
Q ss_pred HhcHHHHHhc--CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCC-CCChhhHhhHHHHHH
Q 008172 320 LQKFEEIVEA--SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYP-TPTRAEVADVSEAVR 396 (575)
Q Consensus 320 v~nldeI~~~--sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p-~PtrAEv~Dv~nav~ 396 (575)
..+++++++. .|.++|+ .|... -..++.+|-++||+|++ ++| ..+.+|...+..+..
T Consensus 56 ~~~~~~ll~~~~vD~V~i~-------tp~~~----H~~~~~~al~aGkhV~~---------EKPla~~~~e~~~l~~~a~ 115 (352)
T 3kux_A 56 VSDPQMLFNDPSIDLIVIP-------TPNDT----HFPLAQSALAAGKHVVV---------DKPFTVTLSQANALKEHAD 115 (352)
T ss_dssp ESCHHHHHHCSSCCEEEEC-------SCTTT----HHHHHHHHHHTTCEEEE---------CSSCCSCHHHHHHHHHHHH
T ss_pred ECCHHHHhcCCCCCEEEEe-------CChHH----HHHHHHHHHHCCCcEEE---------ECCCcCCHHHHHHHHHHHH
Confidence 4578888886 8999996 34433 24567788899999997 566 678888888877655
Q ss_pred cccceEEeccCcCCCCCHHHHHHHHHHHHHH
Q 008172 397 QYADALMLSGESAIGPFGQKAVSVLQMASSR 427 (575)
Q Consensus 397 ~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 427 (575)
.. ...+.-+-.- --+| .++.+++++.+
T Consensus 116 ~~-g~~~~v~~~~-r~~p--~~~~~~~~i~~ 142 (352)
T 3kux_A 116 DA-GLLLSVFHNR-RWDS--DFLTLKTLLAE 142 (352)
T ss_dssp HT-TCCEEECCGG-GGCH--HHHHHHHHHHH
T ss_pred Hc-CCeEEEEeec-ccCH--HHHHHHHHHhc
Confidence 42 2222222211 1234 55666666654
No 492
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=22.76 E-value=1.6e+02 Score=31.89 Aligned_cols=66 Identities=12% Similarity=0.219 Sum_probs=39.7
Q ss_pred HHHHHHHHHcCCCEEEecCcC---------ChhhHHHHHHHHhccC-CCCceEEeeecCHHHHhcHHHHHhc----CCEE
Q 008172 268 WDDIEFGIAEGVDFIAMSFVC---------DADSVRHLKKYVSGKS-SRSIKVLAKIENLESLQKFEEIVEA----SDGI 333 (575)
Q Consensus 268 ~~di~~al~~gvd~I~~SfV~---------sa~dv~~ir~~l~~~~-~~~i~IIaKIEt~~av~nldeI~~~----sDgI 333 (575)
.++.+.+.+.|+|+|.+|.-. +.+-+.++++.+.+++ ..++.||+- -||.+-.++++. +|++
T Consensus 354 ~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~----GGI~~g~Dv~kaLalGAdaV 429 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVD----GGVRRGTDVLKALCLGAKGV 429 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEE----SSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 677888999999999996421 1233455566564321 124666662 233333333333 8999
Q ss_pred EEeC
Q 008172 334 MVAR 337 (575)
Q Consensus 334 mIaR 337 (575)
||||
T Consensus 430 ~iGr 433 (511)
T 1kbi_A 430 GLGR 433 (511)
T ss_dssp EECH
T ss_pred EECH
Confidence 9997
No 493
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=22.71 E-value=4.7e+02 Score=24.41 Aligned_cols=53 Identities=19% Similarity=0.191 Sum_probs=33.7
Q ss_pred ceEEeeec-CH---HH-HhcHHHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEe
Q 008172 308 IKVLAKIE-NL---ES-LQKFEEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVA 370 (575)
Q Consensus 308 i~IIaKIE-t~---~a-v~nldeI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPviva 370 (575)
+.|..+.- ++ .+ .+.++..++. +|++.+ +|+.. ++ -+++++.|+++|..++++
T Consensus 81 ~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~--~~~~~----~~----~~~~~~~~~~~g~~~~~~ 139 (248)
T 1geq_A 81 TPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILV--VDLPV----FH----AKEFTEIAREEGIKTVFL 139 (248)
T ss_dssp CCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEE--TTCCG----GG----HHHHHHHHHHHTCEEEEE
T ss_pred CCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEE--CCCCh----hh----HHHHHHHHHHhCCCeEEE
Confidence 45666663 32 11 2344555555 899999 46543 22 357889999999988874
No 494
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=22.71 E-value=3.2e+02 Score=27.29 Aligned_cols=84 Identities=14% Similarity=0.160 Sum_probs=51.3
Q ss_pred hcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccc
Q 008172 321 QKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYAD 400 (575)
Q Consensus 321 ~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D 400 (575)
++++++++.+|.++- + . .|..-...+..|.++|+|+++.|-- -+.++...+..+... =
T Consensus 80 ~dl~~ll~~aDVvID----F----T---~p~a~~~~~~~~l~~Gv~vViGTTG---------~~~e~~~~L~~aa~~--~ 137 (288)
T 3ijp_A 80 DDPESAFSNTEGILD----F----S---QPQASVLYANYAAQKSLIHIIGTTG---------FSKTEEAQIADFAKY--T 137 (288)
T ss_dssp SCHHHHTTSCSEEEE----C----S---CHHHHHHHHHHHHHHTCEEEECCCC---------CCHHHHHHHHHHHTT--S
T ss_pred CCHHHHhcCCCEEEE----c----C---CHHHHHHHHHHHHHcCCCEEEECCC---------CCHHHHHHHHHHhCc--C
Confidence 467888877887653 2 2 3566677889999999999997622 234444455555443 3
Q ss_pred eEEeccCcCCCCCHHHHHHHHHHHHHHHhhhh
Q 008172 401 ALMLSGESAIGPFGQKAVSVLQMASSRMELWS 432 (575)
Q Consensus 401 ~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~ 432 (575)
.++.+. +|-+-++ .|-++++.+-+++
T Consensus 138 ~~~~a~-----N~SiGv~-ll~~l~~~aa~~l 163 (288)
T 3ijp_A 138 TIVKSG-----NMSLGVN-LLANLVKRAAKAL 163 (288)
T ss_dssp EEEECS-----CCCHHHH-HHHHHHHHHHHHS
T ss_pred CEEEEC-----CCcHHHH-HHHHHHHHHHHhc
Confidence 456664 4444444 4445555554444
No 495
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=22.68 E-value=5.3e+02 Score=24.98 Aligned_cols=121 Identities=15% Similarity=0.134 Sum_probs=73.0
Q ss_pred HHHHHHHHcCCCEEEe-----cCcCChhhHHHHHHHHhccCCCCceEEeeecC------------HHHHhcHHHHHhc--
Q 008172 269 DDIEFGIAEGVDFIAM-----SFVCDADSVRHLKKYVSGKSSRSIKVLAKIEN------------LESLQKFEEIVEA-- 329 (575)
Q Consensus 269 ~di~~al~~gvd~I~~-----SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt------------~~av~nldeI~~~-- 329 (575)
..++.+.+.|+|.|=+ ....+.+++.+....+.+.- ..+.+|.-+-+ .+-++-+...++.
T Consensus 36 ~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~-~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~g~ 114 (257)
T 2yr1_A 36 REAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIA-GEIPILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGA 114 (257)
T ss_dssp HHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHS-SSCCEEEECCCTTTTCCCCSSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhc-cCCCEEEEEeecccCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 3344556778888643 22334555554444443321 23556654432 2334445566654
Q ss_pred CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcccceEEec
Q 008172 330 SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQYADALMLS 405 (575)
Q Consensus 330 sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G~D~vmLs 405 (575)
+|.|=| |+..++ ..+++++.+++.|..+|+.-+-++ ..|+..|+...++ +...|+|.+=+.
T Consensus 115 ~d~iDv-------El~~~~---~~~~l~~~~~~~~~kvI~S~Hdf~-----~tP~~~el~~~~~~~~~~gaDivKia 176 (257)
T 2yr1_A 115 IDLVDY-------ELAYGE---RIADVRRMTEECSVWLVVSRHYFD-----GTPRKETLLADMRQAERYGADIAKVA 176 (257)
T ss_dssp CSEEEE-------EGGGTT---HHHHHHHHHHHTTCEEEEEEEESS-----CCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCEEEE-------ECCCCh---hHHHHHHHHHhCCCEEEEEecCCC-----CCcCHHHHHHHHHHHHhcCCCEEEEE
Confidence 676555 443333 566788889999999998765443 4788888766665 777899988775
No 496
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=22.66 E-value=1.5e+02 Score=28.05 Aligned_cols=69 Identities=6% Similarity=0.022 Sum_probs=42.6
Q ss_pred cCHHHHHHHHHcCCCEEEecCc-CChhhH--HHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhc--CCEEEEe
Q 008172 266 KDWDDIEFGIAEGVDFIAMSFV-CDADSV--RHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEA--SDGIMVA 336 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~SfV-~sa~dv--~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~--sDgImIa 336 (575)
.+.+|+..+.++|+|++.+-|. .|+..| .+++++..... ..+..+.=.-+. ..+.+.+|++. .|.+=+-
T Consensus 9 t~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~-~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLH 82 (203)
T 1v5x_A 9 TRLEDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALG-PFVVRVGVFRDQ-PPEEVLRLMEEARLQVAQLH 82 (203)
T ss_dssp CCHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSC-SSSEEEEEESSC-CHHHHHHHHHHTTCSEEEEC
T ss_pred CcHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCC-CCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEEC
Confidence 4678999999999999999975 444433 44444433322 233333333332 35666677765 6888885
No 497
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=22.63 E-value=2.8e+02 Score=23.21 Aligned_cols=61 Identities=15% Similarity=0.244 Sum_probs=38.2
Q ss_pred HHHHHhcCCcEEEEEcC----Chh-HHHHHhccCCCCcEEEEcCcHHHHH-HhcccCC-cEEEEecCC
Q 008172 464 VDMANNLGVDAIFVYTK----HGH-MASLLSRNRPNPPIFAFTNDDSTRM-ALNLQWG-VIPVLVNLS 524 (575)
Q Consensus 464 v~~a~~~~AkaIVVfT~----SG~-TAr~VSr~RP~~PIiAvT~~~~~aR-~L~L~~G-V~Pvl~~~~ 524 (575)
.+...+...++|++-.. +|. ..+.+.+..|.+|||++|....... .-.+..| +.-++.+..
T Consensus 51 ~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~ 118 (153)
T 3hv2_A 51 LQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYLSKPW 118 (153)
T ss_dssp HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTCCSEEECSSC
T ss_pred HHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCCCcceEEeCCC
Confidence 33445567787766433 343 4556666779999999997654322 2235567 888887654
No 498
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=22.62 E-value=3.2e+02 Score=26.95 Aligned_cols=93 Identities=10% Similarity=0.035 Sum_probs=49.4
Q ss_pred HHHHhc-CCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHH---cCCCEEEehhhHHhhhcCCCCChhhHhhHHH-HHHcc
Q 008172 324 EEIVEA-SDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQ---LNKPVIVASQLLESMVEYPTPTRAEVADVSE-AVRQY 398 (575)
Q Consensus 324 deI~~~-sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~---~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~n-av~~G 398 (575)
+..++. +||+++. |= .-|.+.-.. .-.+++++.+.+ -..||++-| ...+-+|..+.+. |-..|
T Consensus 29 ~~li~~Gv~gl~~~-Gt-tGE~~~Ls~-~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ai~la~~a~~~G 96 (292)
T 2ojp_A 29 DYHVASGTSAIVSV-GT-TGESATLNH-DEHADVVMMTLDLADGRIPVIAGT---------GANATAEAISLTQRFNDSG 96 (292)
T ss_dssp HHHHHHTCCEEEES-ST-TTTGGGSCH-HHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHHHHHHHHTTTSS
T ss_pred HHHHHcCCCEEEEC-cc-ccchhhCCH-HHHHHHHHHHHHHhCCCCcEEEec---------CCccHHHHHHHHHHHHhcC
Confidence 334444 8999985 21 112222111 123344444443 247998754 3445566666665 55679
Q ss_pred cceEEeccCcCCCCCHHHHHHHHHHHHHHH
Q 008172 399 ADALMLSGESAIGPFGQKAVSVLQMASSRM 428 (575)
Q Consensus 399 ~D~vmLs~ETa~G~yPveaV~~m~~I~~~a 428 (575)
+|++|+..=--...-+-+.++..+.|++.+
T Consensus 97 adavlv~~P~y~~~s~~~l~~~f~~ia~a~ 126 (292)
T 2ojp_A 97 IVGCLTVTPYYNRPSQEGLYQHFKAIAEHT 126 (292)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHHHHHHTTC
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 999999743322223445556666665433
No 499
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=22.58 E-value=91 Score=30.40 Aligned_cols=52 Identities=15% Similarity=0.329 Sum_probs=31.6
Q ss_pred CHHHHHHHHHcCCcEEEeeCCCCC--HHHHHHHHHHHHHHhhhcCCceEEEEeCCC
Q 008172 103 SMEDLEKLAMGGMNVARLNMCHNT--REWHLDVIRKIKQLNHEKLFCISVMIDTEG 156 (575)
Q Consensus 103 ~~e~l~~li~~G~~v~RlN~SHg~--~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~G 156 (575)
+.+.++.|-+.|+|++|+-++.|. .+...+.++.+=+.+.+.| +-+++|+-+
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~G--i~Vild~H~ 86 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNK--MVAVVEVHD 86 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTT--CEEEEEECT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCC--CEEEEEecc
Confidence 467899999999999999886441 1111222333333334444 566788754
No 500
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=22.57 E-value=71 Score=32.33 Aligned_cols=60 Identities=13% Similarity=0.215 Sum_probs=46.6
Q ss_pred cCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHH
Q 008172 266 KDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEI 326 (575)
Q Consensus 266 kD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI 326 (575)
.|.+.++.=++.|+||++--++-+++...++++.++..| -++.|++=|==.....++.-+
T Consensus 161 ~d~~~Lk~Kv~aGAdf~iTQ~ffD~~~~~~f~~~~r~~G-i~vPIi~GImPi~s~~~~~~~ 220 (310)
T 3apt_A 161 ADLRHFKAKVEAGLDFAITQLFFNNAHYFGFLERARRAG-IGIPILPGIMPVTSYRQLRRF 220 (310)
T ss_dssp HHHHHHHHHHHHHCSEEEECCCSCHHHHHHHHHHHHHTT-CCSCEECEECCCCCTTHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHHcC-CCCeEEEEecccCCHHHHHHH
Confidence 577788888999999999999999999999999998877 457788776433333344444
Done!