BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008174
(575 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UNN5|FAF1_HUMAN FAS-associated factor 1 OS=Homo sapiens GN=FAF1 PE=1 SV=2
Length = 650
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 20/162 (12%)
Query: 416 EAQRLIREQQDDEYLASLQADREKAEAR-RLMEEEARNAALAEERRKEEETRRKMEEQQE 474
EA+ ++ +QD+ Y SL+ADR K EA R M E+ R E+ R++ EE++E
Sbjct: 502 EARENVKREQDEAYRLSLEADRAKREAHEREMAEQFR----------LEQIRKEQEEERE 551
Query: 475 YERQLAAKEASLPQEPAPDDENA---VTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGR 531
R + E +LP P P +ENA L +R P G RRFL SNKLQ +FD++ +
Sbjct: 552 AIR--LSLEQALP--PEPKEENAEPVSKLRIRTPSGEFLERRFLASNKLQIVFDFV-ASK 606
Query: 532 GIKAGTYRLVRPYPRRAFSDGESALTLNELGLTSKQEALFLE 573
G Y+L+ +PRR + + +L E+ L QE LFLE
Sbjct: 607 GFPWDEYKLLSTFPRRDVTQLDPNKSLLEVKLFP-QETLFLE 647
>sp|P54731|FAF1_MOUSE FAS-associated factor 1 OS=Mus musculus GN=Faf1 PE=1 SV=2
Length = 649
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 88/162 (54%), Gaps = 20/162 (12%)
Query: 416 EAQRLIREQQDDEYLASLQADREKAEAR-RLMEEEARNAALAEERRKEEETRRKMEEQQE 474
EA+ ++ +QD+ Y SL+ADR K EA R M E+ R E+ R++ EE++E
Sbjct: 501 EARENVKREQDEAYRLSLEADRAKREAHEREMAEQFR----------LEQIRKEQEEERE 550
Query: 475 YERQLAAKEASLPQEPAPDDENA---VTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGR 531
R + E +LP P P +ENA L +R P G RRFL SNKLQ +FD++ +
Sbjct: 551 AIR--LSLEQALP--PEPKEENAEPVSKLRIRTPSGEFLERRFLASNKLQIVFDFV-ASK 605
Query: 532 GIKAGTYRLVRPYPRRAFSDGESALTLNELGLTSKQEALFLE 573
G ++L+ +PRR + + +L E+ L QE LFL+
Sbjct: 606 GFPWDEFKLLSTFPRRDVTQLDPNKSLLEVNLFP-QETLFLQ 646
>sp|Q6GQ69|FAF2B_XENLA FAS-associated factor 2-B OS=Xenopus laevis GN=faf2-b PE=2 SV=1
Length = 445
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 25/167 (14%)
Query: 419 RLIREQQDDEYLASLQADREKA-------EARRLMEEEARNAALAEERRKEEETRRKMEE 471
+++R+QQD+ YL SL+AD+EK + +R EEEA+ + EER+K R +EE
Sbjct: 287 QVLRQQQDEAYLVSLRADQEKERKKKEKQDQKRREEEEAQRKQMLEERKK-----RNLEE 341
Query: 472 QQEYERQLAAKEASLPQEPAPDDENAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGR 531
++E K LP EP PD + V ++ +MP+G+R RRFL + L + D++
Sbjct: 342 EKE------RKSECLPAEPVPDHPDNVKIIFKMPNGTRVERRFLFTQSLSVIHDFL-FSL 394
Query: 532 GIKAGTYRLVRPYPRRAFSDGESAL-----TLNELGLTSKQEALFLE 573
+++V +PR+ S TL E GL S+ + LF++
Sbjct: 395 KETPEKFQIVTSFPRQVLPCLPSEEIPVPPTLQEAGL-SQSQLLFVQ 440
>sp|Q6AZH6|FAF2A_XENLA FAS-associated factor 2-A OS=Xenopus laevis GN=faf2-a PE=2 SV=1
Length = 445
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Query: 419 RLIREQQDDEYLASLQADREKAEARRLMEEEARNAALAEERRKEEETRRKMEEQQEYERQ 478
+++R+QQD+ YL SL+AD+EK ++ +E+ R +R++ E R+K ++E ER
Sbjct: 287 QVLRQQQDEAYLVSLRADQEKERKKKEKQEQKRREEEEAQRKQMLEERKKRNLEEEKER- 345
Query: 479 LAAKEASLPQEPAPDDENAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKAGTY 538
K LP EP PD + V ++ +MP+G+R RRFL + L + D++ +
Sbjct: 346 ---KSECLPAEPVPDHPDNVKIIFKMPNGTRVERRFLFTQSLSVIHDFL-FSLKETPEKF 401
Query: 539 RLVRPYPRRAFSDGESAL-----TLNELGLTSKQEALFLE 573
++V +PRR S TL E GL S+ + LF++
Sbjct: 402 QIVTSFPRRVLPCLPSEEIPVPPTLQEAGL-SQSQLLFVQ 440
>sp|Q924K2|FAF1_RAT FAS-associated factor 1 OS=Rattus norvegicus GN=Faf1 PE=2 SV=1
Length = 649
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 14/158 (8%)
Query: 416 EAQRLIREQQDDEYLASLQADREKAEAR-RLMEEEARNAALAEERRKEEETRRKMEEQQE 474
EA+ ++ +QD+ Y SL+ADR K EA R M E+ R E+ R++ EE++E
Sbjct: 501 EARENVKREQDEAYRLSLEADRAKREAHEREMAEQFR----------LEQIRKEQEEERE 550
Query: 475 YERQLAAKEASLPQEPAPDDENAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGRGIK 534
R L+ ++A P+ + E L +R P G RRFL SNKLQ +FD++ +G
Sbjct: 551 AIR-LSLEQALPPEPEEENAEPVSKLRIRTPSGEFLERRFLASNKLQIVFDFV-ASKGFP 608
Query: 535 AGTYRLVRPYPRRAFSDGESALTLNELGLTSKQEALFL 572
++L+ +PRR + + +L E+ L QE LFL
Sbjct: 609 WDEFKLLSTFPRRDVTQLDPNKSLLEVNLFP-QETLFL 645
>sp|Q28BP9|FAF2_XENTR FAS-associated factor 2 OS=Xenopus tropicalis GN=faf2 PE=2 SV=1
Length = 445
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Query: 419 RLIREQQDDEYLASLQADREKAEARRLMEEEARNAALAEERRKEEETRRKMEEQQEYERQ 478
+++R+QQD+ YLASL+AD+EK ++ +E+ R + ++ E R+K ++E ER
Sbjct: 287 QVLRQQQDEAYLASLRADQEKERKKKEKQEQKRREEEEAQLKQMLEERKKRNLEEEKER- 345
Query: 479 LAAKEASLPQEPAPDDENAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKAGTY 538
K LP EP PD + V ++ +MP+G+R RRFL + L + D++ +
Sbjct: 346 ---KSECLPAEPVPDHPDNVKIIFKMPNGTRVERRFLFTQSLSVIHDFL-FSLKETPEKF 401
Query: 539 RLVRPYPRRAFSDGESAL-----TLNELGLTSKQEALFLE 573
++V +PRR S TL E GL S+ + LF++
Sbjct: 402 QIVTNFPRRVLPCLPSEEIPVPPTLQEAGL-SQSQLLFVQ 440
>sp|O74498|UCP10_SCHPO UBX domain-containing protein 10 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ucp10 PE=3 SV=1
Length = 427
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 12/105 (11%)
Query: 424 QQDDEYLASLQADREKAEARRLMEEEARNAALAEERRKEEETRRKMEEQQEYERQLAAKE 483
QQD+ Y ASL DRE+ R EE LA+E+ + E ++K +++Y LA+
Sbjct: 266 QQDNAYQASLARDRERQAFARAEEER-----LAKEKEEREIVQKK---KKQYRAWLAS-- 315
Query: 484 ASLPQEPAPDDENAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYID 528
+LP EP+ +DE A L +R PDGSR RRF K + ++S+++Y+D
Sbjct: 316 -NLPPEPSSEDEPA-RLSIRFPDGSRAVRRFKKDDTVESVYNYVD 358
>sp|Q9QZ49|UBXN8_MOUSE UBX domain-containing protein 8 OS=Mus musculus GN=Ubxn8 PE=1 SV=1
Length = 277
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 477 RQLAAKEA-SLPQEPAPDDENAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKA 535
R L KE LP+EP+ E VT+ +R P+G RRF KS Q L D++ + G
Sbjct: 176 RPLLRKEVPDLPEEPSETAEEVVTVALRCPNGRVLRRRFFKSWNSQVLLDWM-MKVGYHK 234
Query: 536 GTYRLVRPYPRRAFSDGESALTLNELGLT 564
YRL +PRRA + E +L ++G+T
Sbjct: 235 SLYRLSTSFPRRAL-EVEGGSSLEDIGIT 262
>sp|O00124|UBXN8_HUMAN UBX domain-containing protein 8 OS=Homo sapiens GN=UBXN8 PE=1 SV=2
Length = 270
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 486 LPQEPAPDDENAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKAGTYRLVRPYP 545
LP+EP+ E VT+ +R P G+ RRFLKS Q LFD++ G Y L +P
Sbjct: 180 LPEEPSQTAEEVVTVALRCPSGNVLRRRFLKSYSSQVLFDWM-TRIGYHISLYSLSTSFP 238
Query: 546 RRAFSDGESALTLNELGLT 564
RR + E +L ++G+T
Sbjct: 239 RRPLAV-EGGQSLEDIGIT 256
>sp|Q96CS3|FAF2_HUMAN FAS-associated factor 2 OS=Homo sapiens GN=FAF2 PE=1 SV=2
Length = 445
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 15/162 (9%)
Query: 419 RLIREQQDDEYLASLQADREKAEARRLMEEEARNAALAEERRKEEETRRKMEEQQEYERQ 478
+++R+QQD+ YLASL+AD+EK +R E R +++K E RR+ Q+E ER+
Sbjct: 287 QVLRQQQDEAYLASLRADQEKERKKREERERKRRKEEEVQQQKLAEERRRQNLQEEKERK 346
Query: 479 LAAKEASLPQEPAPDDENAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKAG-- 536
L LP EP+PDD +V ++ ++P+ SR RRF S L + D++ +K
Sbjct: 347 LEC----LPPEPSPDDPESVKIIFKLPNDSRVERRFHFSQSLTVIHDFL---FSLKESPE 399
Query: 537 TYRLVRPYPRRAF-----SDGESALTLNELGLTSKQEALFLE 573
+++ +PRR + + TL E GL S E LF++
Sbjct: 400 KFQIEANFPRRVLPCIPSEEWPNPPTLQEAGL-SHTEVLFVQ 440
>sp|Q3TDN2|FAF2_MOUSE FAS-associated factor 2 OS=Mus musculus GN=Faf2 PE=2 SV=2
Length = 445
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 15/162 (9%)
Query: 419 RLIREQQDDEYLASLQADREKAEARRLMEEEARNAALAEERRKEEETRRKMEEQQEYERQ 478
+++R+QQD+ YLASL+AD+EK +R +E R +++K E RR+ Q+E ER+
Sbjct: 287 QVLRQQQDEAYLASLRADQEKERKKREEKERKRRKEEEVQQQKLAEERRRQNLQEEKERK 346
Query: 479 LAAKEASLPQEPAPDDENAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKAG-- 536
L LP EP+PDD +V ++ ++P+ SR RRF S L + D++ +K
Sbjct: 347 LEC----LPPEPSPDDPESVKIIFKLPNDSRVERRFHFSQSLTVIHDFL---FSLKESPE 399
Query: 537 TYRLVRPYPRRAF-----SDGESALTLNELGLTSKQEALFLE 573
+++ +PRR + + TL E GL S E LF++
Sbjct: 400 KFQIEANFPRRVLPCVPSEEWPNPPTLQEAGL-SHTEVLFVQ 440
>sp|P34631|UBXN4_CAEEL UBX domain-containing protein 4 OS=Caenorhabditis elegans GN=ubxn-4
PE=4 SV=1
Length = 469
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 28/149 (18%)
Query: 418 QRLIREQQDDEYLASLQADREKAEAR--RLMEEEARNAALAEERRKEEETRRKMEEQQEY 475
++L E LA ++ADRE A+ + +L+ E NA+ E+++E + +
Sbjct: 227 EKLAAESDKKRILAQIKADREAAQKKFGKLVNTE--NASENTEKKQETTVGKAV------ 278
Query: 476 ERQLAAKEASLPQEPAPDDENAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKA 535
P D L VR+PDGS F ++ L SL + I I
Sbjct: 279 ----------------PSDR--CRLQVRLPDGSTFVEEFPSNDVLNSLVEIIRQKPSIAG 320
Query: 536 GTYRLVRPYPRRAFSDGESALTLNELGLT 564
T+ + +PYPRR F++ + + T E LT
Sbjct: 321 TTFEIQQPYPRRIFTNDDYSKTFLENQLT 349
>sp|Q2HJD0|FAF2_BOVIN FAS-associated factor 2 OS=Bos taurus GN=FAF2 PE=2 SV=1
Length = 445
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 15/162 (9%)
Query: 419 RLIREQQDDEYLASLQADREKAEARRLMEEEARNAALAEERRKEEETRRKMEEQQEYERQ 478
+++R+QQD+ YLASL+AD+EK +R E R +++K E RR+ Q+E ER+
Sbjct: 287 QVLRQQQDEAYLASLRADQEKERKKREERERKRRKEEEVQQQKLAEERRRRNLQEEKERK 346
Query: 479 LAAKEASLPQEPAPDDENAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKAG-- 536
L LP EP+PDD +V ++ ++P+ SR RRF S L + D++ +K
Sbjct: 347 LEC----LPPEPSPDDPESVKIIFKLPNDSRVERRFHFSQSLTVIHDFL---FSLKESPE 399
Query: 537 TYRLVRPYPRRAF-----SDGESALTLNELGLTSKQEALFLE 573
+++ +PRR + + TL E GL S E LF++
Sbjct: 400 KFQIEANFPRRVLPCLPSEEWPNPPTLQEAGL-SHTEVLFVQ 440
>sp|Q5BK32|FAF2_RAT FAS-associated factor 2 OS=Rattus norvegicus GN=Faf2 PE=2 SV=1
Length = 346
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 15/162 (9%)
Query: 419 RLIREQQDDEYLASLQADREKAEARRLMEEEARNAALAEERRKEEETRRKMEEQQEYERQ 478
+++R+QQD+ YLASL+AD+EK +R E R +++K E RR+ Q+E ER+
Sbjct: 188 QVLRQQQDEAYLASLRADQEKERKKREERERKRRKEEEVQQQKLAEERRRQNLQEEKERK 247
Query: 479 LAAKEASLPQEPAPDDENAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKAG-- 536
L LP EP+PDD ++V ++ ++P+ SR RRF S L + D++ +K
Sbjct: 248 LEC----LPPEPSPDDPDSVKIIFKLPNDSRVERRFHFSQSLTVIHDFL---FSLKESPE 300
Query: 537 TYRLVRPYPRRAF-----SDGESALTLNELGLTSKQEALFLE 573
+++ +PRR + + TL E GL S E LF++
Sbjct: 301 KFQIEANFPRRVLPCVPSEEWPNPPTLQEAGL-SHTEVLFVQ 341
>sp|Q12229|UBX3_YEAST UBX domain-containing protein 3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UBX3 PE=1 SV=1
Length = 455
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 21/131 (16%)
Query: 402 SYPRRVP-RPPSPSLEAQRLIREQQDDEYLASLQADREKAEARRLMEEEARNAALAEERR 460
+Y R + R ++E QRLIR+QQD Y SL+ D+++ E R
Sbjct: 280 NYSRLIQLRQQRQNIEMQRLIRQQQDSRYQDSLRRDQQR-----------------ESER 322
Query: 461 KEEETRRKME-EQQEYERQ-LAAKEASLPQEPAPDDENAVTLLVRMPDGSRRGRRFLKSN 518
E+ R +ME E Q E Q L +++ L EP+ D++A + +R+ +G R R+F S
Sbjct: 323 LEQTQREQMEREHQRIENQWLLWRKSQLKPEPSS-DKDASKVAIRLENGQRLVRKFDASL 381
Query: 519 KLQSLFDYIDV 529
+ ++ ++++
Sbjct: 382 PTEEIYAFVEL 392
>sp|Q2TBH5|UBXN8_BOVIN UBX domain-containing protein 8 OS=Bos taurus GN=UBXN8 PE=2 SV=1
Length = 275
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 497 AVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKAGTYRLVRPYPRRAFSDGESAL 556
VT+ +R P G RRF KS Q LFD++ + G + Y L +PRR + E+
Sbjct: 196 VVTVALRCPSGRVLRRRFFKSCSSQVLFDWM-MKLGYRTSLYSLSTSFPRRPL-EVEAGW 253
Query: 557 TLNELGLT 564
+L ++G+T
Sbjct: 254 SLQDIGIT 261
>sp|Q499N6|UBXN1_RAT UBX domain-containing protein 1 OS=Rattus norvegicus GN=Ubxn1 PE=2
SV=2
Length = 297
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 456 AEERRKEEETRRKMEEQQEYERQLAAKEASLPQEPAP------------DDENAVTLLVR 503
A +R +E+ R K E Q+Y + ++ + +P P + + + VR
Sbjct: 160 ARQRVREKIERDKAERAQKYGGTVGSRSSPPATDPGPVPSSPRQEPPTKREYDQCRIQVR 219
Query: 504 MPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKAGT----YRLVRPYPRRAFSDGESALTLN 559
+PDG+ + F +L ++ Y+++ RG + G +L+ +PRRAFS+ + L
Sbjct: 220 LPDGTSLTQTFRAREQLAAVRLYVELHRGEEPGQDQDPVQLLSGFPRRAFSEADMERPLQ 279
Query: 560 ELGLT 564
ELGL
Sbjct: 280 ELGLV 284
>sp|Q32KW2|UBXN1_BOVIN UBX domain-containing protein 1 OS=Bos taurus GN=UBXN1 PE=2 SV=1
Length = 297
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 456 AEERRKEEETRRKMEEQQEYERQLAAKEASLPQEPAP------------DDENAVTLLVR 503
A +R +E+ R K E ++Y + ++ + EP P + + + VR
Sbjct: 160 ARQRVREKIERDKAERAKKYGGNVGSQPSPPATEPGPVPSSPSREPPTKREYDQCRIQVR 219
Query: 504 MPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKAGT----YRLVRPYPRRAFSDGESALTLN 559
+PDG+ + F +L ++ Y+++ RG + G +L+ +PRRAFS+ + L
Sbjct: 220 LPDGTSLTQTFRAREQLAAVRLYVELHRGEELGGAQDPVQLLSGFPRRAFSEADMERPLQ 279
Query: 560 ELGLT 564
ELGL
Sbjct: 280 ELGLV 284
>sp|Q922Y1|UBXN1_MOUSE UBX domain-containing protein 1 OS=Mus musculus GN=Ubxn1 PE=1 SV=1
Length = 297
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 488 QEPAPDDE-NAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKAGT----YRLVR 542
QEP E + + VR+PDG+ + F +L ++ Y+++ RG + G +L+
Sbjct: 203 QEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVELHRGEEPGQDQDPVQLLS 262
Query: 543 PYPRRAFSDGESALTLNELGLT 564
+PRRAFS+ + L ELGL
Sbjct: 263 GFPRRAFSEADMERPLQELGLV 284
>sp|Q04323|UBXN1_HUMAN UBX domain-containing protein 1 OS=Homo sapiens GN=UBXN1 PE=1 SV=2
Length = 297
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 490 PAPDDENAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKAGT----YRLVRPYP 545
P + + + VR+PDG+ + F +L ++ Y+++ RG + G +L+ +P
Sbjct: 206 PTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVELHRGEELGGGQDPVQLLSGFP 265
Query: 546 RRAFSDGESALTLNELGLT 564
RRAFS+ + L ELGL
Sbjct: 266 RRAFSEADMERPLQELGLV 284
>sp|Q6NXA9|UBXN1_DANRE UBX domain-containing protein 1 OS=Danio rerio GN=ubxn1 PE=2 SV=1
Length = 294
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 490 PAPDDENAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKAGTYRLVRPYPRRAF 549
PA D + + VR+ DG+ F L ++ Y+ + G + L+ PYPRR +
Sbjct: 211 PAKKDYDDCRIQVRLLDGTTLSTVFKAQEPLAAVRVYVQMN-GANGQDFNLITPYPRRVY 269
Query: 550 SDGESALTLNELGLT 564
+D + L ELGL
Sbjct: 270 TDLDMEKPLRELGLV 284
>sp|A2R7P5|NST1_ASPNC Stress response protein nst1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=nst1 PE=3 SV=1
Length = 1201
Score = 39.7 bits (91), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 415 LEAQRLIREQQDDEYLASLQADREKAEARRLMEEEARNAALAEERRKEEETRRKMEEQQE 474
LE QR RE+Q + +A+R+ EA RL +E + L EER ++ E RK EQ+E
Sbjct: 591 LEEQRRKREEQKKKR----EAERKAQEAERLRKEAEKQKRLREERERQAEIERKQREQKE 646
Query: 475 YERQ 478
E++
Sbjct: 647 LEKK 650
>sp|P38349|UBX7_YEAST UBX domain-containing protein 7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UBX7 PE=1 SV=1
Length = 436
Score = 39.7 bits (91), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 437 REKAEARRLMEEEARN------AALAEERRKEEETRRKMEEQQEYERQLAAKEASLPQEP 490
RE+ + R+L EEE A AE + +E R +++ + + K+A
Sbjct: 156 REQLKQRKLAEEERERIIRLVRADRAERKALDETHHRTLDDDKPLDVHDYIKDAQKLHS- 214
Query: 491 APDDENAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKAGTYRLVRPYPRRAFS 550
+ L +RM DG F S L + ++DV R Y R PR F
Sbjct: 215 -----SKCVLQIRMTDGKTLKHEFNSSETLNDVRKWVDVNRTDGDCPYSFHRGIPRVTFK 269
Query: 551 DGESALTLNELGLTSKQEALFLE 573
D + TL L LT + AL L+
Sbjct: 270 DSDELKTLETLELTPRS-ALLLK 291
>sp|Q6P5G6|UBXN7_MOUSE UBX domain-containing protein 7 OS=Mus musculus GN=Ubxn7 PE=1 SV=2
Length = 467
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 500 LLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGRGIKAGTYRLVRPYPRRAFSDGESALTLN 559
L++R PDG R + KL +L ++ +G + L+ +PRR S + +TL
Sbjct: 393 LMLRYPDGKREQITLPEQAKLLALVKHVQ-SKGYPNERFELLTNFPRRKLSHLDYDITLQ 451
Query: 560 ELGLTSKQEALFLE 573
E GL QE +F++
Sbjct: 452 EAGLCP-QETVFVQ 464
>sp|Q6GL77|UBXN1_XENTR UBX domain-containing protein 1 OS=Xenopus tropicalis GN=ubxn1 PE=2
SV=1
Length = 287
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 488 QEPAPDDE-NAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGR-GIKAGTYRLVRPYP 545
QEP E + + VR+ DGS + F +L ++ Y+++ G G + L+ +P
Sbjct: 199 QEPPTKKEYDQCRIQVRLLDGSALSQTFRAREQLAAVRLYVELNWPGGAPGPFNLLTSFP 258
Query: 546 RRAFSDGESALTLNELGLT 564
RR F++ + L ELGL
Sbjct: 259 RRVFTEEDMEKPLQELGLV 277
>sp|O42668|TPR1_SCHPO Tetratricopeptide repeat protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tpr1 PE=1 SV=1
Length = 1039
Score = 33.9 bits (76), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 390 PYAPHQYMQ----PEGSYPRRVPRPPSPSLEAQRLIREQQDDEYLASLQADREKAEARRL 445
PY+P Q + + R++ R +E ++ + + +D A +Q REK +ARRL
Sbjct: 832 PYSPTSIEQRAKMAKNTTKRQLERAIQAQIEYEKSVAAKLED---ARIQ--REKEKARRL 886
Query: 446 MEEEARNAALAEERRKEEETRRKMEEQ 472
EEEA E R+ +E R+KM+E+
Sbjct: 887 AEEEALLKEKQERERQLQEERQKMQEE 913
>sp|Q170J7|MOEH_AEDAE Moesin/ezrin/radixin homolog 1 OS=Aedes aegypti GN=Moe PE=3 SV=1
Length = 583
Score = 33.5 bits (75), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 13/87 (14%)
Query: 407 VPRPPSPSLEAQRLIREQQDDEYLASLQADREKAEAR---------RLMEEEARNAALAE 457
+ R + +EAQ +IR +D L LQ +++ EAR RL EE++N +AE
Sbjct: 357 MERSQANLIEAQEMIRRLEDQ--LKQLQFAKDELEARQNELQVMIKRL--EESKNMEVAE 412
Query: 458 ERRKEEETRRKMEEQQEYERQLAAKEA 484
++ E+E R K EE Q+ + +++ K+
Sbjct: 413 RQKLEDEIRAKQEEVQKIQEEVSVKDT 439
>sp|Q6IP50|UBX1A_XENLA UBX domain-containing protein 1-A OS=Xenopus laevis GN=ubxn1-a PE=2
SV=1
Length = 296
Score = 32.7 bits (73), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 28/150 (18%)
Query: 443 RRLMEEEARNAALAEERRKEEETRRKMEEQQEYERQLAAK----------------EASL 486
+++ E+E + AA R K+EE + +++ R A + E S+
Sbjct: 137 QKMQEQEMQKAAEDRRREKQEEKMARERVREKIARDKADRARRFGGASSEPISPPAETSI 196
Query: 487 P----------QEPAPDDE-NAVTLLVRMPDGSRRGRRFLKSNKLQSLFDYIDVGR-GIK 534
P QEP E + + VR+ DGS + F +L ++ Y+++ G
Sbjct: 197 PATTPSPSSPVQEPPTKKEYDQCRIQVRLLDGSALSQTFRAREQLAAVRLYVELNWPGGP 256
Query: 535 AGTYRLVRPYPRRAFSDGESALTLNELGLT 564
G + L+ +P+R F++ + L ELGL
Sbjct: 257 PGPFSLLTSFPQRVFTEEDMEKPLQELGLV 286
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.128 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 222,810,421
Number of Sequences: 539616
Number of extensions: 10386845
Number of successful extensions: 57714
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 837
Number of HSP's that attempted gapping in prelim test: 46713
Number of HSP's gapped (non-prelim): 7369
length of query: 575
length of database: 191,569,459
effective HSP length: 123
effective length of query: 452
effective length of database: 125,196,691
effective search space: 56588904332
effective search space used: 56588904332
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)