Query 008181
Match_columns 575
No_of_seqs 128 out of 1444
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 20:04:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008181.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008181hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1we3_A CPN60(groel); chaperoni 100.0 4E-118 1E-122 981.2 57.2 541 32-575 1-543 (543)
2 1kp8_A Groel protein; chaperon 100.0 2E-118 8E-123 981.6 54.2 527 33-561 2-528 (547)
3 1iok_A Chaperonin 60; chaperon 100.0 6E-119 2E-123 987.0 45.1 540 32-572 2-543 (545)
4 3rtk_A 60 kDa chaperonin 2; he 100.0 1E-118 4E-123 981.6 44.3 528 32-563 1-528 (546)
5 3ruv_A Chaperonin, CPN; double 100.0 3E-101 9E-106 850.1 49.5 475 23-563 3-526 (543)
6 3ko1_A Chaperonin; 9-fold symm 100.0 2E-100 7E-105 842.9 50.0 483 16-563 6-540 (553)
7 1q3q_A Thermosome alpha subuni 100.0 4E-100 1E-104 841.9 50.5 474 23-561 6-530 (548)
8 1a6d_A Thermosome (alpha subun 100.0 3E-100 9E-105 842.3 47.5 484 23-572 4-539 (545)
9 3p9d_C T-complex protein 1 sub 100.0 2E-101 8E-106 852.8 38.0 502 23-559 2-589 (590)
10 1a6d_B Thermosome (beta subuni 100.0 1.8E-99 6E-104 836.1 48.9 478 22-564 3-531 (543)
11 3iyg_B T-complex protein 1 sub 100.0 6.4E-98 2E-102 818.5 51.3 461 33-558 2-513 (513)
12 3iyg_A T-complex protein 1 sub 100.0 7.2E-98 2E-102 821.0 50.8 465 33-556 2-528 (529)
13 3p9d_A T-complex protein 1 sub 100.0 6.3E-99 2E-103 832.9 42.3 471 33-562 16-554 (559)
14 3iyg_H T-complex protein 1 sub 100.0 1.5E-97 5E-102 815.2 51.1 463 33-556 3-514 (515)
15 3p9d_G T-complex protein 1 sub 100.0 9.6E-99 3E-103 830.0 36.3 477 25-563 9-534 (550)
16 3p9d_E T-complex protein 1 sub 100.0 9E-98 3E-102 824.2 43.9 482 19-558 22-560 (562)
17 3p9d_D T-complex protein 1 sub 100.0 3.2E-98 1E-102 822.9 39.5 464 33-556 11-528 (528)
18 3iyg_G T-complex protein 1 sub 100.0 1.8E-96 6E-101 807.5 50.7 459 34-556 2-514 (515)
19 3iyg_D T-complex protein 1 sub 100.0 1.6E-96 5E-101 808.3 49.8 459 34-556 4-518 (518)
20 3iyg_E T-complex protein 1 sub 100.0 3.6E-96 1E-100 805.6 51.4 458 34-555 3-514 (515)
21 3p9d_B T-complex protein 1 sub 100.0 9.2E-98 3E-102 820.4 32.6 466 33-563 9-525 (527)
22 3iyg_Z T-complex protein 1 sub 100.0 3.4E-95 1.2E-99 797.0 48.0 457 34-555 3-516 (517)
23 3iyg_Q T-complex protein 1 sub 100.0 7.3E-95 2.5E-99 794.7 50.5 458 33-555 2-511 (512)
24 3p9d_H T-complex protein 1 sub 100.0 3.3E-96 1E-100 812.6 32.6 477 22-564 8-556 (568)
25 3p9d_F T-complex protein 1 sub 100.0 3.1E-94 1E-98 794.9 37.9 464 33-560 9-541 (546)
26 3aq1_B Thermosome subunit; gro 100.0 7.5E-92 2.6E-96 768.2 40.3 442 69-574 1-495 (500)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 1.3E-40 4.4E-45 309.4 14.7 193 217-410 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 2.5E-39 8.5E-44 301.3 16.5 189 219-408 11-199 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 1.3E-30 4.5E-35 231.5 13.9 144 222-365 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 3.3E-22 1.1E-26 189.2 13.9 132 214-369 2-161 (178)
31 1ass_A Thermosome; chaperonin, 99.8 7.2E-19 2.5E-23 163.0 12.3 127 220-369 1-154 (159)
32 2bn8_A CEDA, cell division act 27.7 28 0.00094 26.7 1.8 24 551-574 18-41 (87)
No 1
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=3.9e-118 Score=981.17 Aligned_cols=541 Identities=49% Similarity=0.783 Sum_probs=514.0
Q ss_pred cchhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhHHHHHHHhcc
Q 008181 32 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGAT 111 (575)
Q Consensus 32 ~~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~q 111 (575)
|+|++.||.++|.+|++||..|+++|+|||||+||+|||++++|+++|||||+||+|+|+++||+||+||||++++|++|
T Consensus 1 ~~k~~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~q 80 (543)
T 1we3_A 1 MAKILVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKT 80 (543)
T ss_dssp -CEEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhh
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHhcCCchHHHHH
Q 008181 112 NKAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGEL 191 (575)
Q Consensus 112 d~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~~~~~L~~va~ts~~~~~~la~l 191 (575)
|+++||||||+|+|+++||+++.+++++|+||..|++||++|++.+++.|+++++|++++++|.++|+++++ +++|+++
T Consensus 81 d~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~l 159 (543)
T 1we3_A 81 NDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKL 159 (543)
T ss_dssp HHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHH
T ss_pred heecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 7899999
Q ss_pred HHHHHHHhcccCeEEEecCCcccceEEEEeceEEeecccCCCCccCcCCCceeccCceeeecccccCCHHHHHHHHHHHH
Q 008181 192 LARAMEKVGKEGVITVVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIYDKKISDMNSLVGLLELAV 271 (575)
Q Consensus 192 v~ea~~~v~~~~~I~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d~~l~~~~~l~~~le~i~ 271 (575)
+++|+.++++++.|.+++|++++|++++++|++|+++|+||||+++++.|++.++||+|+++|++|+++++++++++++.
T Consensus 160 i~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~ 239 (543)
T 1we3_A 160 IADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVA 239 (543)
T ss_dssp HHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHHH
Confidence 99999999999999999999999998999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCEEEEecCchHHHHHHHHHhhcccCceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCccee
Q 008181 272 EKNRALLIVAEDVERDALAMLILNKHHAGVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAK 351 (575)
Q Consensus 272 ~~~~~lvI~~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~ 351 (575)
+.|+||||++++|+++++++|+.|++++..+|++||.|+|+++++++|+|||++|||++++++.+++++++++++||+|+
T Consensus 240 ~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~ 319 (543)
T 1we3_A 240 QTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAE 319 (543)
T ss_dssp TTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEE
T ss_pred hcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeccEEEEecCCChhhHHHHHHHHHhhhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHH
Q 008181 352 KVTVSVDDTIVLHGGGDKKLIEERCEEVCQTAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDAL 431 (575)
Q Consensus 352 ~v~~~~~~~~~~~g~~~~~~i~~~~~~l~~~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal 431 (575)
.|+++++++++|+||++++++++|+.++ +.+++.+.++|++++|+||+++|+|++|||+|||+|+++++|+||++|||+
T Consensus 320 ~v~~~~~~~~~i~g~~~~~~i~~r~~~i-~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl 398 (543)
T 1we3_A 320 RVRITKDETTIVGGKGKKEDIEARINGI-KKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDAL 398 (543)
T ss_dssp EEEECSSCEEEEEECCCHHHHHHHHHHH-HHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred EEEEEcCEEEEEcCCCCHHHHHHHHHHH-HHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCcccCccHHHHHHHHHHHhhhcc-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC-CCcee
Q 008181 432 NATRAAVEEGIVPGGGVALLYATKALENLKTE-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD-DVNFG 509 (575)
Q Consensus 432 ~~~~~al~~gvvpGGGa~E~~l~~~L~~~~~~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~-~~~~G 509 (575)
+++|+++++|+|||||++|++++.+|++++.+ ++++|+++++|++||+.||++||+|||+|+.+++++|++.| +.++|
T Consensus 399 ~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G 478 (543)
T 1we3_A 399 NATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYG 478 (543)
T ss_dssp HHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEE
T ss_pred HHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEE
Confidence 99999999999999999999999999999876 78999999999999999999999999999999999999876 46799
Q ss_pred EecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHhccchhhccCCCCCCCCCCCCCCCCCCCC
Q 008181 510 FDAAKGEYVDMVKAGIIDPLKVVRTALADAASVSLLFTTTEATVLVNSDDKNKPPSRVPNMDGLGY 575 (575)
Q Consensus 510 id~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~~~~~~~~~~ 575 (575)
||..+|++.||++.|||||+.||+++|++|+|+|++||++|++|...|+++|+||. .+||+|-+|
T Consensus 479 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~~-~~~~~~~~~ 543 (543)
T 1we3_A 479 FNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKKESTPA-SAGAGDMDF 543 (543)
T ss_dssp EETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECSCC----------------
T ss_pred EeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCC-CCCCCCCCC
Confidence 99999999999999999999999999999999999999999999998876655544 233555443
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=2.4e-118 Score=981.60 Aligned_cols=527 Identities=50% Similarity=0.779 Sum_probs=513.1
Q ss_pred chhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhHHHHHHHhccc
Q 008181 33 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGATN 112 (575)
Q Consensus 33 ~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~qd 112 (575)
+|++.||.++|.+|++||..|+++|+|||||+||+|||+++.|+++|||||+||+|+|+++||+||+||||++++|++||
T Consensus 2 ~k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd 81 (547)
T 1kp8_A 2 AKDVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 81 (547)
T ss_dssp CEEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHhcCCchHHHHHH
Q 008181 113 KAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELL 192 (575)
Q Consensus 113 ~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~~~~~L~~va~ts~~~~~~la~lv 192 (575)
+++||||||+|+|+++||+++.+++++|+||..|++||++|.+.+++.|+++++|++++++|.++|+++++++++|++++
T Consensus 82 ~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~li 161 (547)
T 1kp8_A 82 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLI 161 (547)
T ss_dssp HHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHH
T ss_pred cccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred HHHHHHhcccCeEEEecCCcccceEEEEeceEEeecccCCCCccCcCCCceeccCceeeecccccCCHHHHHHHHHHHHH
Q 008181 193 ARAMEKVGKEGVITVVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIYDKKISDMNSLVGLLELAVE 272 (575)
Q Consensus 193 ~ea~~~v~~~~~I~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d~~l~~~~~l~~~le~i~~ 272 (575)
++|+.++++++.|.+++|++++|++++++|++|+++|.||||+++++.|+++++||+|+++|++|+++++++++++++.+
T Consensus 162 adAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~ 241 (547)
T 1kp8_A 162 AEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAK 241 (547)
T ss_dssp HHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHG
T ss_pred HHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999989999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCEEEEecCchHHHHHHHHHhhcccCceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeE
Q 008181 273 KNRALLIVAEDVERDALAMLILNKHHAGVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKK 352 (575)
Q Consensus 273 ~~~~lvI~~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~ 352 (575)
+|+||||++++|+++++++|+.|++++..+|++||.|+|+++++++|+|||++|||++++++.+++++++++++||+|+.
T Consensus 242 ~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~ 321 (547)
T 1kp8_A 242 AGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKR 321 (547)
T ss_dssp GGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEE
T ss_pred cCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeccEEEEecCCChhhHHHHHHHHHhhhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHH
Q 008181 353 VTVSVDDTIVLHGGGDKKLIEERCEEVCQTAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALN 432 (575)
Q Consensus 353 v~~~~~~~~~~~g~~~~~~i~~~~~~l~~~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~ 432 (575)
|++++++++||+||++++++++|+.+| +.+++.+.++|++++|+||+++|+|++|||+|||+|+++++|+||+++||++
T Consensus 322 v~~~~~~~~~i~g~~~~~~i~~r~~~i-~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~ 400 (547)
T 1kp8_A 322 VVINKDTTTIIDGVGEEAAIQGRVAQI-RQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALH 400 (547)
T ss_dssp EEECSSCEEEEEECCCHHHHHHHHHHH-HHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHH
T ss_pred EEEccceEEEEcCCCCHHHHHHHHHHH-HHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCcccCccHHHHHHHHHHHhhhccCchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcCCCceeEec
Q 008181 433 ATRAAVEEGIVPGGGVALLYATKALENLKTENEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQDDVNFGFDA 512 (575)
Q Consensus 433 ~~~~al~~gvvpGGGa~E~~l~~~L~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~Gid~ 512 (575)
++|+++++|+|||||++|++++.+|++++..++++|+++++|++||+.||++||+|||+|+.+++++|++. +.++|||.
T Consensus 401 ~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~-~~~~G~d~ 479 (547)
T 1kp8_A 401 ATRAAVEEGVVAGGGVALIRVASKLADLRGQNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG-DGNYGYNA 479 (547)
T ss_dssp HHHHHHHHCEEETTTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-CTTEEEET
T ss_pred HHHHhccCCEEeCCcHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-CCCEeEeC
Confidence 99999999999999999999999999987556899999999999999999999999999999999999976 57899999
Q ss_pred CCCcccccccCcccccHHHHHHHHHHHHHHHHHHhccchhhccCCCCCC
Q 008181 513 AKGEYVDMVKAGIIDPLKVVRTALADAASVSLLFTTTEATVLVNSDDKN 561 (575)
Q Consensus 513 ~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~~~ 561 (575)
.+|++.||++.|||||+.||+++|++|+|+|++||++|++|...|++++
T Consensus 480 ~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~~ 528 (547)
T 1kp8_A 480 ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDA 528 (547)
T ss_dssp TTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCC---
T ss_pred CCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecCCccCC
Confidence 9999999999999999999999999999999999999999999887663
No 3
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=6e-119 Score=987.03 Aligned_cols=540 Identities=54% Similarity=0.821 Sum_probs=472.5
Q ss_pred cchhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhHHHHHHHhcc
Q 008181 32 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGAT 111 (575)
Q Consensus 32 ~~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~q 111 (575)
|+|++.||.++|.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+||+|+|+++||+||+||||++++|++|
T Consensus 2 ~~k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~q 81 (545)
T 1iok_A 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRT 81 (545)
T ss_dssp CCEEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHG
T ss_pred CchhhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHhcCCchHHHHH
Q 008181 112 NKAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGEL 191 (575)
Q Consensus 112 d~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~~~~~L~~va~ts~~~~~~la~l 191 (575)
|+++||||||+|+|+++||+++.+++.+|+||..|++||++|++.+++.|+++++|+++.++|.++|+++++++++|+++
T Consensus 82 d~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~l 161 (545)
T 1iok_A 82 NDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQ 161 (545)
T ss_dssp GGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHH
T ss_pred ccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999988999999
Q ss_pred HHHHHHHhcccCeEEEecCCcccceEEEEeceEEeecccCCCCccCcCCCceeccCceeeecccccCCHHHHHHHHHHHH
Q 008181 192 LARAMEKVGKEGVITVVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIYDKKISDMNSLVGLLELAV 271 (575)
Q Consensus 192 v~ea~~~v~~~~~I~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d~~l~~~~~l~~~le~i~ 271 (575)
+++|+.++++++.|.+++|++++|++++++|++|+++|.||||+++++.|+++++||+|+++|++|+++++++++++++.
T Consensus 162 i~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~ 241 (545)
T 1iok_A 162 IAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVI 241 (545)
T ss_dssp HHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC---------
T ss_pred HHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHH
Confidence 99999999999989889999999998999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCEEEEecCchHHHHHHHHHhhcccCceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCccee
Q 008181 272 EKNRALLIVAEDVERDALAMLILNKHHAGVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAK 351 (575)
Q Consensus 272 ~~~~~lvI~~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~ 351 (575)
+.|+||||++++|+++++++|+.|++++..+|++||.|+|+++++++|+|||++|||++++++++++++++++++||+|+
T Consensus 242 ~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~ 321 (545)
T 1iok_A 242 QSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAK 321 (545)
T ss_dssp --CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEEEE
T ss_pred hcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeccEEEEecCCChhhHHHHHHHHHhhhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHH
Q 008181 352 KVTVSVDDTIVLHGGGDKKLIEERCEEVCQTAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDAL 431 (575)
Q Consensus 352 ~v~~~~~~~~~~~g~~~~~~i~~~~~~l~~~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal 431 (575)
.|++++++|+||+||++++++++|++++ +.+++.+.++|++++|+||+++|+|++|||+|||+|+++++|+||++|||+
T Consensus 322 ~v~~~~~~~~~i~g~~~~~~i~~r~~~i-~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl 400 (545)
T 1iok_A 322 KVSINKDNTTIVDGAGEKAEIEARVSQI-RQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDAL 400 (545)
T ss_dssp EEEECSSCEEEESCCCCHHHHHHHHHHH-HHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred EEEEecCEEEEEeCCCCHHHHHHHHHHH-HHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCcccCccHHHHHHHHHHHhhhccCchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcCCCceeEe
Q 008181 432 NATRAAVEEGIVPGGGVALLYATKALENLKTENEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQDDVNFGFD 511 (575)
Q Consensus 432 ~~~~~al~~gvvpGGGa~E~~l~~~L~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~Gid 511 (575)
+++|+++++|+|||||++|++++.+|++++..++++|+++++|++||+.||++||+|||+|+.+++++|++.|++++|||
T Consensus 401 ~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~d 480 (545)
T 1iok_A 401 NATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFN 480 (545)
T ss_dssp HHHHHHHHHCEEETTTHHHHHHGGGGGSCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEE
T ss_pred HHHHHHhhcCCCCCchHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEe
Confidence 99999999999999999999999999998755689999999999999999999999999999999999998888889999
Q ss_pred cCCCcccccccCcccccHHHHHHHHHHHHHHHHHHhccchhhccCCCCCCCC-CC-CCCCCCC
Q 008181 512 AAKGEYVDMVKAGIIDPLKVVRTALADAASVSLLFTTTEATVLVNSDDKNKP-PS-RVPNMDG 572 (575)
Q Consensus 512 ~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~~~~~-~~-~~~~~~~ 572 (575)
..+|++.||++.|||||+.||+++|++|+|+|++||++|++|...|++++++ +| .||||+|
T Consensus 481 ~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~~~~~~~~~~~~~~~ 543 (545)
T 1iok_A 481 AQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKPEPKAPAGGMPDMGGMGG 543 (545)
T ss_dssp TTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC-----------------
T ss_pred CCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccCCccCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999988766443 23 4455554
No 4
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.2e-118 Score=981.57 Aligned_cols=528 Identities=47% Similarity=0.746 Sum_probs=435.5
Q ss_pred cchhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhHHHHHHHhcc
Q 008181 32 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGAT 111 (575)
Q Consensus 32 ~~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~q 111 (575)
|+|++.||+++|..|+.|+..|+++|+|||||+||||||+++.|+++|||||+||+|+|+++||++|+||||++++|++|
T Consensus 1 ~~k~~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~q 80 (546)
T 3rtk_A 1 MAKTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKT 80 (546)
T ss_dssp ------------------------------------------------------------CCCHHHHHHHHHHHHHHTSC
T ss_pred CCceeeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHhcCCchHHHHH
Q 008181 112 NKAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGEL 191 (575)
Q Consensus 112 d~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~~~~~L~~va~ts~~~~~~la~l 191 (575)
|+++||||||+|+|+++||+++.+++++|+||..|++||++|.+.++++|+++++|++++++|.++|++|++ +++++++
T Consensus 81 d~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~l 159 (546)
T 3rtk_A 81 DDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIGDL 159 (546)
T ss_dssp C-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHH
T ss_pred hhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 7899999
Q ss_pred HHHHHHHhcccCeEEEecCCcccceEEEEeceEEeecccCCCCccCcCCCceeccCceeeecccccCCHHHHHHHHHHHH
Q 008181 192 LARAMEKVGKEGVITVVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIYDKKISDMNSLVGLLELAV 271 (575)
Q Consensus 192 v~ea~~~v~~~~~I~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d~~l~~~~~l~~~le~i~ 271 (575)
+++|+.+++++|.|.++.+....+++++++|++|+++|.||||+++++.|+++++||+|+++|++|+++++++++++++.
T Consensus 160 iadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~ 239 (546)
T 3rtk_A 160 IAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVI 239 (546)
T ss_dssp HHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHH
T ss_pred HHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHHH
Confidence 99999999999999888776666566999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCEEEEecCchHHHHHHHHHhhcccCceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCccee
Q 008181 272 EKNRALLIVAEDVERDALAMLILNKHHAGVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAK 351 (575)
Q Consensus 272 ~~~~~lvI~~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~ 351 (575)
++|+||||++++|+++++++|+.|++++.++|++||+|+|++.++++|+|||++|||++++++++++++++++++||+|+
T Consensus 240 ~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~ 319 (546)
T 3rtk_A 240 GAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKAR 319 (546)
T ss_dssp TTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEE
T ss_pred hcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeccEEEEecCCChhhHHHHHHHHHhhhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHH
Q 008181 352 KVTVSVDDTIVLHGGGDKKLIEERCEEVCQTAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDAL 431 (575)
Q Consensus 352 ~v~~~~~~~~~~~g~~~~~~i~~~~~~l~~~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal 431 (575)
.|+++++++++|+||++++++..|+++| +.+++.+.++|++++|+||+++|+|++|||+|||+|+++++|+||+++|||
T Consensus 320 ~v~i~~d~~~~i~g~~~~~~i~~r~~~i-~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl 398 (546)
T 3rtk_A 320 KVVVTKDETTIVEGAGDTDAIAGRVAQI-RQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAV 398 (546)
T ss_dssp EEEECSSCEEEEEECSCHHHHHHHHHHH-HHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHH
T ss_pred EEEEcCCeEEEEcCCCCHHHHHHHHHHH-HHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCcccCccHHHHHHHHHHHhhhccCchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcCCCceeEe
Q 008181 432 NATRAAVEEGIVPGGGVALLYATKALENLKTENEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQDDVNFGFD 511 (575)
Q Consensus 432 ~~~~~al~~gvvpGGGa~E~~l~~~L~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~Gid 511 (575)
|++|+++++|+|||||++|++++.+|++++ .++++|+++++|++||+.||++||+|||+|+.+++++|++. ...+|||
T Consensus 399 ~a~r~av~~giVpGGGa~e~~~s~~L~~~~-~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~-~~~~G~d 476 (546)
T 3rtk_A 399 RNAKAAVEEGIVAGGGVTLLQAAPTLDELK-LEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL-PAGHGLN 476 (546)
T ss_dssp HHHHHHHHHCEEETTTHHHHTTGGGSTTSC-CCTTHHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS-CTTEECC
T ss_pred HHHHHHHhCCcccCCcHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh-cCCEeEc
Confidence 999999999999999999999999999987 67899999999999999999999999999999999999986 3559999
Q ss_pred cCCCcccccccCcccccHHHHHHHHHHHHHHHHHHhccchhhccCCCCCCCC
Q 008181 512 AAKGEYVDMVKAGIIDPLKVVRTALADAASVSLLFTTTEATVLVNSDDKNKP 563 (575)
Q Consensus 512 ~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~~~~~ 563 (575)
..+|++.||++.|||||+.||+++|++|+|+|++||++|++|...|+++|+|
T Consensus 477 ~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~~~ 528 (546)
T 3rtk_A 477 AQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKEKAS 528 (546)
T ss_dssp SSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC-------------
T ss_pred CCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999999999999999999999999999999988877654
No 5
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=2.6e-101 Score=850.05 Aligned_cols=475 Identities=22% Similarity=0.330 Sum_probs=433.9
Q ss_pred CcccccccccchhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhH
Q 008181 23 GRVLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGAN 102 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ 102 (575)
|+|+..+. .++..+|.++|..|+.||..|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+ |+
T Consensus 3 ~~p~~l~~--~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Ak 76 (543)
T 3ruv_A 3 QQPGVLPE--NMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPA----AK 76 (543)
T ss_dssp -CCCSSCS--SEEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHH----HH
T ss_pred CCCeeecC--CcchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HH
Confidence 88933344 5788899999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHHHHhccccccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCC--CHHHHHHHHHH
Q 008181 103 LVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMIS--TPEEITQVATI 180 (575)
Q Consensus 103 ll~~~s~~qd~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~t 180 (575)
|++++|++||+++||||||+|||+++||+++.+++++|+||..|++||++|.+.++++|+++++|++ +++.|.++|+|
T Consensus 77 ll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~t 156 (543)
T 3ruv_A 77 MLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMT 156 (543)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999987 78999999999
Q ss_pred hcCC------chHHHHHHHHHHHHhccc-Ce-----E--EEecCCcccceEEEEeceEEeecccCCCCccCcCCCceecc
Q 008181 181 SANG------EREIGELLARAMEKVGKE-GV-----I--TVVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELE 246 (575)
Q Consensus 181 s~~~------~~~la~lv~ea~~~v~~~-~~-----I--~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~ 246 (575)
++++ +++|++++++|+.+++++ |. | .+..|++..|+ ++++|++|+++|.|||| +++++
T Consensus 157 sl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~m-------~~~~~ 228 (543)
T 3ruv_A 157 SITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKERVSAQM-------PKKVT 228 (543)
T ss_dssp HHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCCSCTTS-------CSEEE
T ss_pred HhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccccCccc-------ccccc
Confidence 9864 689999999999999876 53 4 44578888887 99999999999999984 67899
Q ss_pred Cceeeeccccc-------------CCHHH-----------HHHHHHHHHHhCCCEEEEecCchHHHHHHHHHhhcccCce
Q 008181 247 NPLILIYDKKI-------------SDMNS-----------LVGLLELAVEKNRALLIVAEDVERDALAMLILNKHHAGVK 302 (575)
Q Consensus 247 ~~kIll~d~~l-------------~~~~~-----------l~~~le~i~~~~~~lvI~~~~i~~~al~~l~~n~~~~~~~ 302 (575)
||+|+++|++| +++++ +.++++++.+.|+||||++++|+++++++|.++ +
T Consensus 229 n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~------g 302 (543)
T 3ruv_A 229 DAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKE------G 302 (543)
T ss_dssp EEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHT------T
T ss_pred CcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHc------C
Confidence 99999999954 44444 567789999999999999999999999999865 4
Q ss_pred EEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEEe---eccEEEEecCCChhhHHHHHHHH
Q 008181 303 VCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTVS---VDDTIVLHGGGDKKLIEERCEEV 379 (575)
Q Consensus 303 i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~~---~~~~~~~~g~~~~~~i~~~~~~l 379 (575)
|++|+ ++++++|+|||++|||+++++ ++++++++||+|+.|++. +++|+||++|+++
T Consensus 303 I~~v~-----~v~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~---------- 362 (543)
T 3ruv_A 303 IVAAR-----RVKKSDMEKLAKATGANVIAA-----IAALSAQDLGDAGLVEERKISGDSMIFVEECKHP---------- 362 (543)
T ss_dssp CEEEC-----SCCHHHHHHHHHHHCCCEESC-----GGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSC----------
T ss_pred cEEEe-----eCCHHHHHHHHHHhCCceecc-----cccCCHHHCCcccEEEEEEeCCceEEEEECCCCC----------
Confidence 78887 458899999999999999999 999999999999999975 6899999998754
Q ss_pred HhhhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHHHHH
Q 008181 380 CQTAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYATKALE 458 (575)
Q Consensus 380 ~~~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~~L~ 458 (575)
..+||+|||+|+++++|+||++|||||++|+++++| +|||||++|++++.+|+
T Consensus 363 --------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~ 416 (543)
T 3ruv_A 363 --------------------------KAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLR 416 (543)
T ss_dssp --------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHH
T ss_pred --------------------------ceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHH
Confidence 248999999999999999999999999999999999 99999999999999999
Q ss_pred hhhcc-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcCC----CceeEecCCCcccccccCcccccHHHHH
Q 008181 459 NLKTE-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQDD----VNFGFDAAKGEYVDMVKAGIIDPLKVVR 533 (575)
Q Consensus 459 ~~~~~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~~----~~~Gid~~~g~i~d~~~~gI~dp~~vk~ 533 (575)
+|+.+ ++++|+++++|++||+.||++||+|||+|+.+++.+|++.|. .++|||+.+|++.||++.|||||+.||+
T Consensus 417 ~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~ 496 (543)
T 3ruv_A 417 EYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKT 496 (543)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHH
T ss_pred HHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHH
Confidence 99877 789999999999999999999999999999999999998763 6799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchhhccCCCCCCCC
Q 008181 534 TALADAASVSLLFTTTEATVLVNSDDKNKP 563 (575)
Q Consensus 534 ~~l~~A~e~a~~iL~iD~iI~~~~~~~~~~ 563 (575)
++|++|+|+|++|||||++|...|+.+|++
T Consensus 497 ~al~~A~~~a~~iL~id~ii~~~~~~~~~~ 526 (543)
T 3ruv_A 497 QAIQSAAESTEMLLRIDDVIAAEKLRGAPD 526 (543)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEC-------
T ss_pred HHHHHHHHHHHHHHhHHhheecCccCCCCC
Confidence 999999999999999999999988876544
No 6
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=2.1e-100 Score=842.88 Aligned_cols=483 Identities=23% Similarity=0.364 Sum_probs=424.7
Q ss_pred cccccccCcccccccccchhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCc
Q 008181 16 AAKKGVYGRVLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDK 95 (575)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP 95 (575)
++-.+-.|+|+.+.+. .++..+|.++|..|+.||..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||
T Consensus 6 ~~~~~~~~~~~~~l~~-~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP 84 (553)
T 3ko1_A 6 TVATTPEGIPVIILKE-GSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHP 84 (553)
T ss_dssp -----------------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSH
T ss_pred eeecCCCCCeEEEEec-CcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccCh
Confidence 3334456899988555 588999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhHHHHHHHhccccccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCC--CHHH
Q 008181 96 AKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMIS--TPEE 173 (575)
Q Consensus 96 ~~~~ga~ll~~~s~~qd~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~--~~~~ 173 (575)
+ |||++++|++||+++||||||+|||+++||+++.+++++|+||..|++||++|.+.++++|+++++|++ +++.
T Consensus 85 ~----Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~ 160 (553)
T 3ko1_A 85 A----AKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDL 160 (553)
T ss_dssp H----HHHHHHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHH
T ss_pred h----HHHHHHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHH
Confidence 8 999999999999999999999999999999999999999999999999999999999999999999987 7899
Q ss_pred HHHHHHHhcCC------chHHHHHHHHHHHHhccc--Ce-------EE--EecCCcccceEEEEeceEEeecccCCCCcc
Q 008181 174 ITQVATISANG------EREIGELLARAMEKVGKE--GV-------IT--VVDGNTMVNELEVVGGMKLARGYISPYFVT 236 (575)
Q Consensus 174 L~~va~ts~~~------~~~la~lv~ea~~~v~~~--~~-------I~--~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~ 236 (575)
|.++|+|++++ +++|++|+++|+.+++++ |. |. +..|++..|+ ++++|++|+++|.||+|
T Consensus 161 L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~m-- 237 (553)
T 3ko1_A 161 LRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVVDKEVVHPGM-- 237 (553)
T ss_dssp HHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEECSCBSCTTS--
T ss_pred HHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEecccccCCCC--
Confidence 99999999886 689999999999999875 54 54 4478888887 99999999999999984
Q ss_pred CcCCCceeccCceeeecccc-------------cCCHHH-----------HHHHHHHHHHhCCCEEEEecCchHHHHHHH
Q 008181 237 DPKTQKCELENPLILIYDKK-------------ISDMNS-----------LVGLLELAVEKNRALLIVAEDVERDALAML 292 (575)
Q Consensus 237 ~~~~~~~~l~~~kIll~d~~-------------l~~~~~-----------l~~~le~i~~~~~~lvI~~~~i~~~al~~l 292 (575)
+++++||||+++|++ ++++++ +.++++++.+.|+||||++++|+++++++|
T Consensus 238 -----~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L 312 (553)
T 3ko1_A 238 -----PKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYL 312 (553)
T ss_dssp -----CSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHH
T ss_pred -----ccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHH
Confidence 678899999999995 445655 567789999999999999999999999999
Q ss_pred HHhhcccCceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEEe---eccEEEEecCCCh
Q 008181 293 ILNKHHAGVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTVS---VDDTIVLHGGGDK 369 (575)
Q Consensus 293 ~~n~~~~~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~~---~~~~~~~~g~~~~ 369 (575)
.++ +|++|+ ++++++|+|||++|||+++++ ++++++++||+|+.|++. +++|+||+||+++
T Consensus 313 ~~~------gI~~v~-----~v~k~~leria~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~ 376 (553)
T 3ko1_A 313 AKK------GVLAVR-----RAKKSDLEKLARATGGRVVSN-----IDEISEQDLGYASLIEERKVGEDKMVFVEGAKNP 376 (553)
T ss_dssp HHH------TCEEEC-----CCCHHHHHHHHTTTTCCEESC-----GGGCCSSSSEECSEEECCCCSSSCCEEEESCSSS
T ss_pred Hhc------chhhhh-----hhhhhhHHHHHHhhCCeeecc-----cccCChhhcchHHHHHHhhcCcceEEEeccCCCC
Confidence 865 478887 458899999999999999999 999999999999999965 7899999998754
Q ss_pred hhHHHHHHHHHhhhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccH
Q 008181 370 KLIEERCEEVCQTAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGV 448 (575)
Q Consensus 370 ~~i~~~~~~l~~~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa 448 (575)
..+||+|||+|+++++|+||++|||||++|+++++| +|||||+
T Consensus 377 ------------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa 420 (553)
T 3ko1_A 377 ------------------------------------KSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGA 420 (553)
T ss_dssp ------------------------------------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTH
T ss_pred ------------------------------------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCce
Confidence 248999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHhhhcc-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC---C-CceeEecCCCcccccccC
Q 008181 449 ALLYATKALENLKTE-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD---D-VNFGFDAAKGEYVDMVKA 523 (575)
Q Consensus 449 ~E~~l~~~L~~~~~~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~---~-~~~Gid~~~g~i~d~~~~ 523 (575)
+|++++.+|++|+.+ ++++|+++++|++||+.||++||+|||+|+.+++.+|++.| + .++|||+.+|++.||++.
T Consensus 421 ~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~ 500 (553)
T 3ko1_A 421 VEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQK 500 (553)
T ss_dssp HHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGG
T ss_pred eEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHh
Confidence 999999999999877 89999999999999999999999999999999999999987 2 579999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHHHHHhccchhhccCCCCCCCC
Q 008181 524 GIIDPLKVVRTALADAASVSLLFTTTEATVLVNSDDKNKP 563 (575)
Q Consensus 524 gI~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~~~~~ 563 (575)
|||||+.||+++|++|+|+|++|||+|++|...|+.+|++
T Consensus 501 gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~ 540 (553)
T 3ko1_A 501 GVIEPALVKMNAIKAATEAATLVLRIDDVVSAGKKSGGES 540 (553)
T ss_dssp SCEEETTHHHHHHHHHHHHHHHHHHEEEECCC--------
T ss_pred CccchhhhhhhhhhhcchhheEEEehHHHHHhhhhccCCC
Confidence 9999999999999999999999999999999988877654
No 7
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=3.5e-100 Score=841.88 Aligned_cols=474 Identities=22% Similarity=0.389 Sum_probs=435.8
Q ss_pred CcccccccccchhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhH
Q 008181 23 GRVLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGAN 102 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ 102 (575)
|+|+.+.+. .+++.+|.++|..|+.||..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+ ||
T Consensus 6 ~~~~~~l~~-~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Ak 80 (548)
T 1q3q_A 6 GQPVVILPE-GTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPA----AK 80 (548)
T ss_dssp ---CCCSCT-TCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHH----HH
T ss_pred CCCcccccC-CcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchH----HH
Confidence 578666444 5889999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHHHHhccccccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCC--CHHHHHHHHHH
Q 008181 103 LVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMIS--TPEEITQVATI 180 (575)
Q Consensus 103 ll~~~s~~qd~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~t 180 (575)
|++++|++||+++||||||+|+|+++||+++.+++++|+||..|++||++|++.++++|+++++|++ ++++|.++|+|
T Consensus 81 ll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~t 160 (548)
T 1q3q_A 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAAT 160 (548)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999987 48899999999
Q ss_pred hcCC------chHHHHHHHHHHHHhccc--C-------eEEE--ecCCcccceEEEEeceEEeecccCCCCccCcCCCce
Q 008181 181 SANG------EREIGELLARAMEKVGKE--G-------VITV--VDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKC 243 (575)
Q Consensus 181 s~~~------~~~la~lv~ea~~~v~~~--~-------~I~~--~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~ 243 (575)
++++ +++|++++++|+.+++++ | .|.+ .+|++++|+ ++++|++|+++|.||+| ++
T Consensus 161 sl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~ 232 (548)
T 1q3q_A 161 SITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELVRGVVIDKEVVHPRM-------PK 232 (548)
T ss_dssp HSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEESSEEESCCCSSTTS-------CS
T ss_pred HhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEEeeEEEeccCCCCCC-------cc
Confidence 8654 589999999999999875 3 4544 499999988 99999999999999985 56
Q ss_pred eccCceeeecccc-------------cCCHHHH-----------HHHHHHHHHhCCCEEEEecCchHHHHHHHHHhhccc
Q 008181 244 ELENPLILIYDKK-------------ISDMNSL-----------VGLLELAVEKNRALLIVAEDVERDALAMLILNKHHA 299 (575)
Q Consensus 244 ~l~~~kIll~d~~-------------l~~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~l~~n~~~~ 299 (575)
+++||+|+++|++ +++++++ .++++++.+.|+||||++++|+++++++|..++
T Consensus 233 ~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~--- 309 (548)
T 1q3q_A 233 RVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYG--- 309 (548)
T ss_dssp EESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTT---
T ss_pred eecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCC---
Confidence 7899999999998 5566664 788999999999999999999999999999875
Q ss_pred CceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEEe---eccEEEEecCCChhhHHHHH
Q 008181 300 GVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTVS---VDDTIVLHGGGDKKLIEERC 376 (575)
Q Consensus 300 ~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~~---~~~~~~~~g~~~~~~i~~~~ 376 (575)
|++|+ ++++++|+|||++|||+++++ ++++++++||+|+.|++. +++|+||+||+++
T Consensus 310 ---I~av~-----~~~k~~le~ia~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~------- 369 (548)
T 1q3q_A 310 ---IMAVR-----RVKKSDMEKLAKATGAKIVTN-----VKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNP------- 369 (548)
T ss_dssp ---CEEEC-----SCCHHHHHHHHHHHCCCCBSS-----GGGCCGGGCEEESEEEEEEETTEEEEEEECCSSC-------
T ss_pred ---cEEEc-----cCCHHHHHHHHHHhCCeEecc-----cccCCHHHCCCceEEEEEEecCceEEEEecCCCC-------
Confidence 88886 568999999999999999998 999999999999999975 7899999997643
Q ss_pred HHHHhhhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHH
Q 008181 377 EEVCQTAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYATK 455 (575)
Q Consensus 377 ~~l~~~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~ 455 (575)
++|||+|||+|+++++|+||++|||++++|+++++| +|||||++|++++.
T Consensus 370 -----------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~ 420 (548)
T 1q3q_A 370 -----------------------------KAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAI 420 (548)
T ss_dssp -----------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHH
T ss_pred -----------------------------CeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHH
Confidence 469999999999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcc-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC---CCceeEecCCCcccccccCcccccHHH
Q 008181 456 ALENLKTE-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD---DVNFGFDAAKGEYVDMVKAGIIDPLKV 531 (575)
Q Consensus 456 ~L~~~~~~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~dp~~v 531 (575)
+|++++.+ ++++|+++++|++||+.||++||+|||+|+.+++++|++.| +.++|||..+|++.||++.|||||+.|
T Consensus 421 ~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~v 500 (548)
T 1q3q_A 421 RLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRV 500 (548)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHH
T ss_pred HHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHH
Confidence 99999876 78999999999999999999999999999999999999876 358999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccchhhccCCCCCC
Q 008181 532 VRTALADAASVSLLFTTTEATVLVNSDDKN 561 (575)
Q Consensus 532 k~~~l~~A~e~a~~iL~iD~iI~~~~~~~~ 561 (575)
|+++|++|+|+|++||++|++|...|++++
T Consensus 501 k~~al~~A~e~a~~iL~iD~iI~~~~~~~~ 530 (548)
T 1q3q_A 501 KKQAIKSASEAAIMILRIDDVIAAKATKPE 530 (548)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcCCC
Confidence 999999999999999999999999876644
No 8
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=2.7e-100 Score=842.28 Aligned_cols=484 Identities=22% Similarity=0.362 Sum_probs=425.6
Q ss_pred Cc-ccccccccchhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhh
Q 008181 23 GR-VLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGA 101 (575)
Q Consensus 23 ~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga 101 (575)
|+ |..+.+. .+++.+|.++|..|+.||..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+ |
T Consensus 4 ~~~~~~~l~~-~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----A 78 (545)
T 1a6d_A 4 GQVPILVLKE-GTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPT----A 78 (545)
T ss_dssp --------------CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHH----H
T ss_pred CCCcccccCC-cchhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchH----H
Confidence 45 6655443 4779999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHHHHhccccccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCC-CHHHHHHHHHH
Q 008181 102 NLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMIS-TPEEITQVATI 180 (575)
Q Consensus 102 ~ll~~~s~~qd~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~-~~~~L~~va~t 180 (575)
||++++|++||+++||||||+|+|+++||+++.+++++|+||..|++||++|++.++++|+++++| + +++.|.++|+|
T Consensus 79 kll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~t 157 (545)
T 1a6d_A 79 KMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALT 157 (545)
T ss_dssp HHHHGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999 7 78999999999
Q ss_pred hcC------CchHHHHHHHHHHHHhccc---------CeEEEe--cCCcccceEEEEeceEEeecccCCCCccCcCCCce
Q 008181 181 SAN------GEREIGELLARAMEKVGKE---------GVITVV--DGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKC 243 (575)
Q Consensus 181 s~~------~~~~la~lv~ea~~~v~~~---------~~I~~~--~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~ 243 (575)
+++ ++++|++|+++|+.+++++ +.|.++ +|++++|+ ++++|++|+++|.||+| ++
T Consensus 158 sl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~ 229 (545)
T 1a6d_A 158 ALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVIDKEKVHSKM-------PD 229 (545)
T ss_dssp HTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEESCCCSCTTS-------CS
T ss_pred HHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEeccCCCCCC-------cc
Confidence 864 3689999999999999865 245554 99999988 99999999999999985 56
Q ss_pred eccCceeeecccc-------------cCCHHHH-----------HHHHHHHHHhCCCEEEEecCchHHHHHHHHHhhccc
Q 008181 244 ELENPLILIYDKK-------------ISDMNSL-----------VGLLELAVEKNRALLIVAEDVERDALAMLILNKHHA 299 (575)
Q Consensus 244 ~l~~~kIll~d~~-------------l~~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~l~~n~~~~ 299 (575)
+++||+|+++|++ +++++++ .++++++.+.|+||||++++|+++++++|..++
T Consensus 230 ~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~--- 306 (545)
T 1a6d_A 230 VVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG--- 306 (545)
T ss_dssp EEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT---
T ss_pred eecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC---
Confidence 7899999999998 4555554 788999999999999999999999999999885
Q ss_pred CceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEEe---eccEEEEecCCChhhHHHHH
Q 008181 300 GVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTVS---VDDTIVLHGGGDKKLIEERC 376 (575)
Q Consensus 300 ~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~~---~~~~~~~~g~~~~~~i~~~~ 376 (575)
|++|+ ++++++|+|||++|||+++++ ++++++++||+|+.|++. +++|+||++|+++
T Consensus 307 ---I~av~-----~~~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~------- 366 (545)
T 1a6d_A 307 ---IYAVR-----RVKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNP------- 366 (545)
T ss_dssp ---CEEEC-----SCCHHHHHHHHHHHCCCEESS-----GGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCS-------
T ss_pred ---eeEec-----cCCHHHHHHHHHHhCCeeecc-----cccCCHHHCCCceEEEEEEecCceEEEEecCCCC-------
Confidence 88886 568999999999999999998 999999999999999975 5899999997643
Q ss_pred HHHHhhhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHH
Q 008181 377 EEVCQTAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYATK 455 (575)
Q Consensus 377 ~~l~~~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~ 455 (575)
++|||+|||+|+++++|+||++|||++++|+++++| +|||||++|++++.
T Consensus 367 -----------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~ 417 (545)
T 1a6d_A 367 -----------------------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAM 417 (545)
T ss_dssp -----------------------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHH
T ss_pred -----------------------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHH
Confidence 569999999999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcc-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC---CCceeEecCCCcccccccCcccccHHH
Q 008181 456 ALENLKTE-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD---DVNFGFDAAKGEYVDMVKAGIIDPLKV 531 (575)
Q Consensus 456 ~L~~~~~~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~dp~~v 531 (575)
+|++++.+ ++++|+++++|++||+.||++||+|||+|+.+++.+|++.| +.++|||..+|++.||++.|||||+.|
T Consensus 418 ~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~v 497 (545)
T 1a6d_A 418 RLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRV 497 (545)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHH
T ss_pred HHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHH
Confidence 99999876 78999999999999999999999999999999999999876 358999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccchhhccCCCCCCCCCCCC-CCCCC
Q 008181 532 VRTALADAASVSLLFTTTEATVLVNSDDKNKPPSRV-PNMDG 572 (575)
Q Consensus 532 k~~~l~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~~-~~~~~ 572 (575)
|+++|++|+|+|++||++|++|...|+++|+|+.-+ |||||
T Consensus 498 k~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~~~~~~~~~~ 539 (545)
T 1a6d_A 498 KTHALESAVEVATMILRIDDVIASKKSTPPSGQGGQGQGMPG 539 (545)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEC--------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCC
Confidence 999999999999999999999999877643321122 56766
No 9
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=2.3e-101 Score=852.85 Aligned_cols=502 Identities=18% Similarity=0.293 Sum_probs=429.9
Q ss_pred CcccccccccchhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhH
Q 008181 23 GRVLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGAN 102 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ 102 (575)
+.|+.+.+. ..+..+|.++|..|+.||..|+++|+|||||+||+|||+++.|+++|||||+||+|+|+++||+ |+
T Consensus 2 ~~~~~~~~~-~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~----Ak 76 (590)
T 3p9d_C 2 QAPVVFMNA-SQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPA----AK 76 (590)
T ss_dssp ----CCSCT-TCCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHH----HH
T ss_pred CCCeEeecC-CcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHH----HH
Confidence 357777554 5788999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHhccccccCCccchHHHHHHHHHHHHHHh-hhCCCChHHHHHHHHHHHHHHHHHHHhhcccCC--CHHHHHHHHH
Q 008181 103 LVKQVAGATNKAAGDGTTCATVLTQAILTEGCKS-VAAGVNVMDLRSGIKMAIDAVISDLKSRAQMIS--TPEEITQVAT 179 (575)
Q Consensus 103 ll~~~s~~qd~~~GDGTTs~vvLa~~Ll~~~~~l-i~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~ 179 (575)
|++++|++||+++||||||+|+|+++||+++.++ +.+|+||..|++||++|.+.++++|+++++|++ +++.|.++|+
T Consensus 77 ll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~ 156 (590)
T 3p9d_C 77 SMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQ 156 (590)
T ss_dssp THHHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHT
T ss_pred HHHHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999999999999999999999999987 3688999999
Q ss_pred HhcCC------chHHHHHHHHHHHHhcccC------------------eEEEecCCcccceEEEEeceEEeecccCCCCc
Q 008181 180 ISANG------EREIGELLARAMEKVGKEG------------------VITVVDGNTMVNELEVVGGMKLARGYISPYFV 235 (575)
Q Consensus 180 ts~~~------~~~la~lv~ea~~~v~~~~------------------~I~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~ 235 (575)
|++++ +++|++|+++|+.++++++ .|.+.+|+++.|+ ++++|++|++++.+|
T Consensus 157 tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds-~lv~Gmvfdk~~~~~--- 232 (590)
T 3p9d_C 157 ASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS-RVLKGVLLNKDVVHP--- 232 (590)
T ss_dssp TTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC-BCCSSEEECCCCSCT---
T ss_pred HHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc-eeeeEEEEecccCCC---
Confidence 88653 6899999999999998653 2456679999987 999999999998876
Q ss_pred cCcCCCceeccCceeeeccccc-------------CCHHHHHHH-----------HHHHHHhCCCEEEEecCchHHHHHH
Q 008181 236 TDPKTQKCELENPLILIYDKKI-------------SDMNSLVGL-----------LELAVEKNRALLIVAEDVERDALAM 291 (575)
Q Consensus 236 ~~~~~~~~~l~~~kIll~d~~l-------------~~~~~l~~~-----------le~i~~~~~~lvI~~~~i~~~al~~ 291 (575)
.|+++++||+|+++|++| ++++++.++ ++++.+.|++|||++++|+++++++
T Consensus 233 ----~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~ 308 (590)
T 3p9d_C 233 ----KMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHY 308 (590)
T ss_dssp ----TSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHH
T ss_pred ----CCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHH
Confidence 378899999999999964 344554443 4688899999999999999999999
Q ss_pred HHHhhcccCceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcc-eeEEE---EeeccEEEEecCC
Q 008181 292 LILNKHHAGVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGT-AKKVT---VSVDDTIVLHGGG 367 (575)
Q Consensus 292 l~~n~~~~~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~-~~~v~---~~~~~~~~~~g~~ 367 (575)
|.+++ |++ |+++++.+|+|||++|||+++++ ++++++++||+ |+.|+ +++++|+||+||+
T Consensus 309 L~k~~------I~a-----v~~~~k~~le~ia~~TGa~iis~-----l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~ 372 (590)
T 3p9d_C 309 LLKGG------CSV-----LRRVKKSDNNRIARVTGATIVNR-----VEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCK 372 (590)
T ss_dssp HHHTT------CCC-----CCCCCHHHHHHHHHHHTCCCCSC-----STTCCTTSCBCCCSEEECCEETTEECEEECC--
T ss_pred HHhcc------cee-----eccCCHHHHHHHHHHhCCceeec-----ccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCC
Confidence 98774 555 55779999999999999999998 99999999999 99997 4678999999999
Q ss_pred Chhh--------------------------HHHHHHHHHhhhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHH
Q 008181 368 DKKL--------------------------IEERCEEVCQTAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVG 421 (575)
Q Consensus 368 ~~~~--------------------------i~~~~~~l~~~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~ 421 (575)
+++. +++|+.++ +.++..+.++|+++ +++|+|++|||+|||+|+++++
T Consensus 373 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i-~~~~~~~~~~~~~~-----~~~l~ggv~tI~lrg~te~~l~ 446 (590)
T 3p9d_C 373 EPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKI-SSSGALGSGHHHHH-----HHHGSGKACTIMLRGGSKDILN 446 (590)
T ss_dssp -------------------------------------------------------------CCCSCCCEEEECSSTTTHH
T ss_pred CccccccccccccccccchhhhhcchhhHHHHHHHHHH-HHHHhccCCHHHHH-----HHhhcCCeeEEEEcCCCHHHHH
Confidence 8888 99999999 99999999999854 5789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHHHHHhhhcc-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHH
Q 008181 422 ERKDRVTDALNATRAAVEEG-IVPGGGVALLYATKALENLKTE-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGK 499 (575)
Q Consensus 422 E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~~L~~~~~~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~ 499 (575)
|+||+++|||+++|+++++| +|||||++|++++.+|++|+.. ++++|+++++|++||+.||++||+|||+|+.+++.+
T Consensus 447 E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~ 526 (590)
T 3p9d_C 447 EIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQ 526 (590)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 99999999999999999995 9999999999999999998876 789999999999999999999999999999999999
Q ss_pred HHhcC---CCceeEecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHhccchhhccCCCC
Q 008181 500 LLEQD---DVNFGFDAAKGEYVDMVKAGIIDPLKVVRTALADAASVSLLFTTTEATVLVNSDD 559 (575)
Q Consensus 500 l~~~~---~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~ 559 (575)
|++.| ++++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||+|++|...|+.
T Consensus 527 l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~ 589 (590)
T 3p9d_C 527 LRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRKQ 589 (590)
T ss_dssp HHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCCC--
T ss_pred HHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99876 5679999999999999999999999999999999999999999999999877653
No 10
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.8e-99 Score=836.14 Aligned_cols=478 Identities=22% Similarity=0.375 Sum_probs=423.1
Q ss_pred cCcccccccccchhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhh
Q 008181 22 YGRVLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGA 101 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga 101 (575)
.|+|..+.+. +++..+|.++|..|+.||..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+ |
T Consensus 3 ~~~~~~~l~~-~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----A 77 (543)
T 1a6d_B 3 AGQPIFILKE-GTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPA----A 77 (543)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHH----H
T ss_pred CCcchhhcCC-cchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchH----H
Confidence 3577666443 5789999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHHHHhccccccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCCC--HHHHHHHHH
Q 008181 102 NLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMIST--PEEITQVAT 179 (575)
Q Consensus 102 ~ll~~~s~~qd~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~~--~~~L~~va~ 179 (575)
+|++++|++||+++||||||+|+|+++||+++.+++++|+||..|++||++|++.++++|+++++|++. ++.|.++|+
T Consensus 78 kll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~ 157 (543)
T 1a6d_B 78 KMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQ 157 (543)
T ss_dssp HHHHHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999874 788999999
Q ss_pred HhcCC------chHHHHHHHHHHHHhccc--Ce-------EEE--ecCCcccceEEEEeceEEeecccCCCCccCcCCCc
Q 008181 180 ISANG------EREIGELLARAMEKVGKE--GV-------ITV--VDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQK 242 (575)
Q Consensus 180 ts~~~------~~~la~lv~ea~~~v~~~--~~-------I~~--~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~ 242 (575)
|++++ +++|++++++|+.+++++ |. |.+ .+|++++|+ ++++|++|+++|.||+| +
T Consensus 158 tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~ 229 (543)
T 1a6d_B 158 TSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGIIVDKEKVHPGM-------P 229 (543)
T ss_dssp HHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEEESCCCSSTTS-------C
T ss_pred HHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEEEecCCCCCCC-------c
Confidence 88654 588999999999999876 52 544 499999988 99999999999999985 5
Q ss_pred eeccCceeeecccc-------------cCCHHHH-----------HHHHHHHHHhCCCEEEEecCchHHHHHHHHHhhcc
Q 008181 243 CELENPLILIYDKK-------------ISDMNSL-----------VGLLELAVEKNRALLIVAEDVERDALAMLILNKHH 298 (575)
Q Consensus 243 ~~l~~~kIll~d~~-------------l~~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~l~~n~~~ 298 (575)
++++||+|+++|++ +++++++ .++++++.+.|+||||++++|+++++++|..++
T Consensus 230 ~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~-- 307 (543)
T 1a6d_B 230 DVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAG-- 307 (543)
T ss_dssp SEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTT--
T ss_pred ceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCC--
Confidence 77899999999998 5555554 788999999999999999999999999999875
Q ss_pred cCceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEEe---eccEEEEecCCChhhHHHH
Q 008181 299 AGVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTVS---VDDTIVLHGGGDKKLIEER 375 (575)
Q Consensus 299 ~~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~~---~~~~~~~~g~~~~~~i~~~ 375 (575)
|++|+ ++++++|+|||++|||+++++ ++++++++||+|+.|++. +++|++|+||+++
T Consensus 308 ----I~av~-----~v~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~------ 367 (543)
T 1a6d_B 308 ----IYAVR-----RVKKSDMDKLAKATGASIVST-----IDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNP------ 367 (543)
T ss_dssp ----CEEEC-----SCCHHHHHHHHHHHTCCEESC-----GGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSS------
T ss_pred ----eeEec-----cCCHHHHHHHHHHhCCceecc-----cccCCHHHCCCceEEEEEEecCceEEEEecCCCC------
Confidence 88886 568999999999999999998 999999999999999975 7899999997643
Q ss_pred HHHHHhhhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHH
Q 008181 376 CEEVCQTAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYAT 454 (575)
Q Consensus 376 ~~~l~~~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~ 454 (575)
++|||+|||+|+++++|+||++|||++++|+++++| +|||||++|++++
T Consensus 368 ------------------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s 417 (543)
T 1a6d_B 368 ------------------------------KAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIA 417 (543)
T ss_dssp ------------------------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHH
T ss_pred ------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHH
Confidence 569999999999999999999999999999999999 9999999999999
Q ss_pred HHHHhhhcc-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC---CCceeEecCCCcccccccCcccccHH
Q 008181 455 KALENLKTE-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD---DVNFGFDAAKGEYVDMVKAGIIDPLK 530 (575)
Q Consensus 455 ~~L~~~~~~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~dp~~ 530 (575)
.+|++++.+ ++++|+++++|++||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.
T Consensus 418 ~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~ 497 (543)
T 1a6d_B 418 FRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIR 497 (543)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHH
T ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHH
Confidence 999999876 78999999999999999999999999999999999999875 35899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccchhhccCCCCCCCCC
Q 008181 531 VVRTALADAASVSLLFTTTEATVLVNSDDKNKPP 564 (575)
Q Consensus 531 vk~~~l~~A~e~a~~iL~iD~iI~~~~~~~~~~~ 564 (575)
||+++|+.|+|+|++||++|++|...|+++|+||
T Consensus 498 vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~ 531 (543)
T 1a6d_B 498 VGKQAIESATEAAIMILRIDDVIATKSSSSSSNP 531 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccCCCCCC
Confidence 9999999999999999999999999887665553
No 11
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=6.4e-98 Score=818.55 Aligned_cols=461 Identities=23% Similarity=0.317 Sum_probs=427.0
Q ss_pred chhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCC--CCeEEecChHHHhccccccCccchhhhHHHHHHHhc
Q 008181 33 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSI--GNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGA 110 (575)
Q Consensus 33 ~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~--g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~ 110 (575)
+++..+|.++|..|+.||..|+++|+|||||+||||||+++. |+++|||||+||||+|+++||. |||++++|++
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~----Akll~e~a~~ 77 (513)
T 3iyg_B 2 GADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPA----AKVLVDMSRV 77 (513)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHH----HHHHHHHHHH
Confidence 467789999999999999999999999999999999999999 9999999999999999999997 9999999999
Q ss_pred cccccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCC-----CHHHHHHHHHHhcC--
Q 008181 111 TNKAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMIS-----TPEEITQVATISAN-- 183 (575)
Q Consensus 111 qd~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~-----~~~~L~~va~ts~~-- 183 (575)
||+++||||||+|+|+++||+++.+++++|+||..|++||++|.+.++++|+++++|++ +++.|.++|+|+++
T Consensus 78 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK 157 (513)
T 3iyg_B 78 QDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSK 157 (513)
T ss_pred hhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999986 57889999998875
Q ss_pred ----CchHHHHHHHHHHHHhccc---CeEE--EecCCcccceEEEEeceEEeecccCCCCccCcCCCceeccCceeeecc
Q 008181 184 ----GEREIGELLARAMEKVGKE---GVIT--VVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIYD 254 (575)
Q Consensus 184 ----~~~~la~lv~ea~~~v~~~---~~I~--~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d 254 (575)
++++|++++++|+.+++++ +.|. +..|++..|+ ++++|++|+++|.|| |+++++||+|+++|
T Consensus 158 ~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~~en~kIll~~ 228 (513)
T 3iyg_B 158 LLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKRIENAKILIAN 228 (513)
T ss_pred ccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC--------CceeecCceEEEEc
Confidence 3579999999999999886 6554 4579999887 999999999999886 67889999999999
Q ss_pred cc--------------cCCHHHHH-----------HHHHHHHHhCCCEEEEecCchHHHHHHHHHhhcccCceEEEEecC
Q 008181 255 KK--------------ISDMNSLV-----------GLLELAVEKNRALLIVAEDVERDALAMLILNKHHAGVKVCAIKAP 309 (575)
Q Consensus 255 ~~--------------l~~~~~l~-----------~~le~i~~~~~~lvI~~~~i~~~al~~l~~n~~~~~~~i~~vk~~ 309 (575)
++ +++++++. ++++++.+.|+||||++++|+++++++|..+ +|++||++
T Consensus 229 ~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~------~I~av~~~ 302 (513)
T 3iyg_B 229 TGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAA------GVMAIEHA 302 (513)
T ss_pred CCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHc------CceEEecC
Confidence 84 44555554 4788999999999999999999999999865 59999988
Q ss_pred CCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEE---EeeccEEEEecCCChhhHHHHHHHHHhhhhcc
Q 008181 310 GFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVT---VSVDDTIVLHGGGDKKLIEERCEEVCQTAMGK 386 (575)
Q Consensus 310 ~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~---~~~~~~~~~~g~~~~~~i~~~~~~l~~~~l~~ 386 (575)
++ .+|+|||++|||+++++ ++++++++||+|+.|+ ++++++++|+||++
T Consensus 303 ~~-----~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------------ 354 (513)
T 3iyg_B 303 DF-----VGVERLALVTGGEIAST-----FDHPELVKLGSCKLIEEVMIGEDKLIHFSGVAL------------------ 354 (513)
T ss_pred CH-----HHHHHHHHHhCCEEecc-----cccCCHhHCCcccEEEEEEECCeEEEEEecCCC------------------
Confidence 54 58999999999999999 9999999999999998 56789999999753
Q ss_pred CcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHHHHHhhhcc-C
Q 008181 387 SAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYATKALENLKTE-N 464 (575)
Q Consensus 387 ~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~~L~~~~~~-~ 464 (575)
+++|||+|||+|+++++|+||++|||++++|++++++ +|||||++|++++.+|++++.+ +
T Consensus 355 ------------------~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~ 416 (513)
T 3iyg_B 355 ------------------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTP 416 (513)
T ss_pred ------------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccC
Confidence 3579999999999999999999999999999999995 9999999999999999999877 7
Q ss_pred chhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC---CCceeEecCCCcccccccCcccccHHHHHHHHHHHHH
Q 008181 465 EDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD---DVNFGFDAAKGEYVDMVKAGIIDPLKVVRTALADAAS 541 (575)
Q Consensus 465 ~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e 541 (575)
+++|+++++|++||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|
T Consensus 417 g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~ 496 (513)
T 3iyg_B 417 GKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAE 496 (513)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999886 4679999999999999999999999999999999999
Q ss_pred HHHHHhccchhhccCCC
Q 008181 542 VSLLFTTTEATVLVNSD 558 (575)
Q Consensus 542 ~a~~iL~iD~iI~~~~~ 558 (575)
+|++|||+|++|...|+
T Consensus 497 ~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 497 AAEVILRVDNIIKAAPR 513 (513)
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 99999999999987653
No 12
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.2e-98 Score=820.96 Aligned_cols=465 Identities=20% Similarity=0.296 Sum_probs=425.9
Q ss_pred chhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhHHHHHHHhccc
Q 008181 33 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGATN 112 (575)
Q Consensus 33 ~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~qd 112 (575)
.++..+|.++|..|+.||..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||. |+|++++|++||
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd 77 (529)
T 3iyg_A 2 FGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKVLCELADLQD 77 (529)
T ss_pred CcchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChH----HHHHHHHHHHhh
Confidence 3567899999999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred cccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHh-hcccCC--CHHHHHHHHHHhcC------
Q 008181 113 KAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKS-RAQMIS--TPEEITQVATISAN------ 183 (575)
Q Consensus 113 ~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~-~s~~v~--~~~~L~~va~ts~~------ 183 (575)
+++||||||+|+|+++||+++.+++++|+||..|++||++|.+.++++|++ +++|++ +++.|.++|+|+++
T Consensus 78 ~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~ 157 (529)
T 3iyg_A 78 KEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGI 157 (529)
T ss_pred hhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccc
Confidence 999999999999999999999999999999999999999999999999998 899987 68899999999985
Q ss_pred CchHHHHHHHHHHHHhc---ccC-----e----EEEecCCcccceEEEEeceEEeecccCCCCccCcCCCceeccCceee
Q 008181 184 GEREIGELLARAMEKVG---KEG-----V----ITVVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLIL 251 (575)
Q Consensus 184 ~~~~la~lv~ea~~~v~---~~~-----~----I~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIl 251 (575)
++++|++++++|+.+++ ++| . |.+.+|+++.|+ ++++|++|+++|.||+| ++.++||||+
T Consensus 158 ~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 229 (529)
T 3iyg_A 158 NGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGYALNCVVGSQGM-------PKRIVNAKIA 229 (529)
T ss_pred cHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeeeEEecCcccccC-------CcccCCceEE
Confidence 36899999999999997 233 1 455689998887 99999999999999974 6688999999
Q ss_pred ecccccC-------------CHH-----------HHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHhhcccCceEEEEe
Q 008181 252 IYDKKIS-------------DMN-----------SLVGLLELAVEKNRALLIVAEDVERDALAMLILNKHHAGVKVCAIK 307 (575)
Q Consensus 252 l~d~~l~-------------~~~-----------~l~~~le~i~~~~~~lvI~~~~i~~~al~~l~~n~~~~~~~i~~vk 307 (575)
++|++|+ +++ .+.++++++.+.|++|||++++|+++++++|..|+ |++|+
T Consensus 230 ll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~g------I~av~ 303 (529)
T 3iyg_A 230 CLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG------AMAVR 303 (529)
T ss_pred EecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC------Cceec
Confidence 9999763 232 25678899999999999999999999999999884 88887
Q ss_pred cCCCCCcchhHHHHHHHHhCCeEeecCCCCc-ccccCcccCcceeEEE---EeeccEEEEecCCChhhHHHHHHHHHhhh
Q 008181 308 APGFGDNRRANLDDLAILTGGEIISEDRGLT-LDKVKEEMLGTAKKVT---VSVDDTIVLHGGGDKKLIEERCEEVCQTA 383 (575)
Q Consensus 308 ~~~~~~~~~~~le~la~~tGa~iis~~~~~~-~~~~~~~~lG~~~~v~---~~~~~~~~~~g~~~~~~i~~~~~~l~~~~ 383 (575)
++++++|+|||++|||+++++..+++ .+++++++||+|+.|+ +++++|+||+||+++
T Consensus 304 -----~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-------------- 364 (529)
T 3iyg_A 304 -----RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKAR-------------- 364 (529)
T ss_pred -----cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCC--------------
Confidence 46889999999999999999944433 2345678899999998 678899999997653
Q ss_pred hccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHHHHHhhhc
Q 008181 384 MGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYATKALENLKT 462 (575)
Q Consensus 384 l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~~L~~~~~ 462 (575)
+.|||+|||+|+++++|.||++|||++++|+++++| +||||||+||+++.+|++|+.
T Consensus 365 ----------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~ 422 (529)
T 3iyg_A 365 ----------------------TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYAT 422 (529)
T ss_pred ----------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhh
Confidence 458999999999999999999999999999999999 999999999999999999987
Q ss_pred c-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC---C--------CceeEecCCCcccccccCcccccHH
Q 008181 463 E-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD---D--------VNFGFDAAKGEYVDMVKAGIIDPLK 530 (575)
Q Consensus 463 ~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~---~--------~~~Gid~~~g~i~d~~~~gI~dp~~ 530 (575)
+ ++++|+++++|++||+.||++||+|||+|+.+++.+|++.| + .++|||+.+|++.||++.|||||+.
T Consensus 423 ~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~ 502 (529)
T 3iyg_A 423 SMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTI 502 (529)
T ss_pred hcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHH
Confidence 7 79999999999999999999999999999999999999876 2 5799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccchhhccC
Q 008181 531 VVRTALADAASVSLLFTTTEATVLVN 556 (575)
Q Consensus 531 vk~~~l~~A~e~a~~iL~iD~iI~~~ 556 (575)
||+++|++|+|+|++|||||+||...
T Consensus 503 vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (529)
T 3iyg_A 503 VKVKSLKFATEAAITILRIDDLIKLH 528 (529)
T ss_pred HHHHHHHHHHHHHHHHHhHHhhhcCC
Confidence 99999999999999999999999874
No 13
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=6.3e-99 Score=832.92 Aligned_cols=471 Identities=21% Similarity=0.344 Sum_probs=435.0
Q ss_pred chhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhHHHHHHHhccc
Q 008181 33 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGATN 112 (575)
Q Consensus 33 ~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~qd 112 (575)
++++.+|.++|..|+.||..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+ |+|++++|++||
T Consensus 16 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd 91 (559)
T 3p9d_A 16 GGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPA----GKILVELAQQQD 91 (559)
T ss_dssp SCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHH----HHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHH----HHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHh-hcccCCC--HHHHHHHHHHhcCC-----
Q 008181 113 KAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKS-RAQMIST--PEEITQVATISANG----- 184 (575)
Q Consensus 113 ~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~-~s~~v~~--~~~L~~va~ts~~~----- 184 (575)
+++||||||+|||+++||+++.+++++|+||..|++||++|++.++++|++ +++|++. ++.|.++|+|++++
T Consensus 92 ~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~ 171 (559)
T 3p9d_A 92 REIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGA 171 (559)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGGT
T ss_pred HHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccc
Confidence 999999999999999999999999999999999999999999999999999 9999874 77899999999986
Q ss_pred -chHHHHHHHHHHHHhcc-----cCe-------EEEecCCcccceEEEEeceEEeecccCCCCccCcCCCceecc--Cce
Q 008181 185 -EREIGELLARAMEKVGK-----EGV-------ITVVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELE--NPL 249 (575)
Q Consensus 185 -~~~la~lv~ea~~~v~~-----~~~-------I~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~--~~k 249 (575)
+++|++|+++|+.++++ ++. |.+.+|++++|+ ++++|++|+++|.||+| +++++ ||+
T Consensus 172 ~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~m-------~~~ie~~n~k 243 (559)
T 3p9d_A 172 DSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGYALNCTVASQAM-------PKRIAGGNVK 243 (559)
T ss_dssp THHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTTS-------CSEECSSSBC
T ss_pred hhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccEEEeecccCCCc-------ceeeccCCce
Confidence 68999999999999983 132 455669999987 99999999999999984 67788 999
Q ss_pred eeecccccC-------------CHHH-----------HHHHHHHHHHhCCCEEEEecCchHHHHHHHHHhhcccCceEEE
Q 008181 250 ILIYDKKIS-------------DMNS-----------LVGLLELAVEKNRALLIVAEDVERDALAMLILNKHHAGVKVCA 305 (575)
Q Consensus 250 Ill~d~~l~-------------~~~~-----------l~~~le~i~~~~~~lvI~~~~i~~~al~~l~~n~~~~~~~i~~ 305 (575)
|+++|++|+ ++++ +.++++++.+.|+||||++++|+++++++|..|+ |++
T Consensus 244 Ill~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~------I~a 317 (559)
T 3p9d_A 244 IACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAK------IMG 317 (559)
T ss_dssp EEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTT------CEE
T ss_pred EEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcC------Cce
Confidence 999999873 3333 6788999999999999999999999999999885 778
Q ss_pred EecCCCCCcchhHHHHHHHHhCCeEeecCCCCcc-cccCcccCcceeEEE---EeeccEEEEecCCChhhHHHHHHHHHh
Q 008181 306 IKAPGFGDNRRANLDDLAILTGGEIISEDRGLTL-DKVKEEMLGTAKKVT---VSVDDTIVLHGGGDKKLIEERCEEVCQ 381 (575)
Q Consensus 306 vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~-~~~~~~~lG~~~~v~---~~~~~~~~~~g~~~~~~i~~~~~~l~~ 381 (575)
|+ ++++.+|+|||++|||+++++..++.. +++++++||+|+.|+ +++++|+||+||++
T Consensus 318 v~-----~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------- 379 (559)
T 3p9d_A 318 VR-----RCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSK------------- 379 (559)
T ss_dssp ES-----SCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESS-------------
T ss_pred Ec-----cCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCC-------------
Confidence 76 568899999999999999999655554 789999999999998 46789999999764
Q ss_pred hhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHHHHHhh
Q 008181 382 TAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYATKALENL 460 (575)
Q Consensus 382 ~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~~L~~~ 460 (575)
+++|||+|||+|+++++|+||++||||+++|+++++| +|||||++|++++.+|+++
T Consensus 380 -----------------------~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~ 436 (559)
T 3p9d_A 380 -----------------------HSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNF 436 (559)
T ss_dssp -----------------------SCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHH
T ss_pred -----------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999999 9999999999999999999
Q ss_pred hcc-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC---CC------------ceeEecCCCcccccccCc
Q 008181 461 KTE-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD---DV------------NFGFDAAKGEYVDMVKAG 524 (575)
Q Consensus 461 ~~~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~---~~------------~~Gid~~~g~i~d~~~~g 524 (575)
+.+ ++++|+++++|++||+.||++||+|||+|+.+++.+|++.| +. ++|||+.+|++.||++.|
T Consensus 437 ~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~g 516 (559)
T 3p9d_A 437 ATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAG 516 (559)
T ss_dssp HTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTSS
T ss_pred hcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhcc
Confidence 877 78999999999999999999999999999999999999876 23 699999999999999999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHhccchhhccCCCCCCC
Q 008181 525 IIDPLKVVRTALADAASVSLLFTTTEATVLVNSDDKNK 562 (575)
Q Consensus 525 I~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~~~~ 562 (575)
||||+.||+++|++|+|+|++|||||++|...|++++.
T Consensus 517 I~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~ 554 (559)
T 3p9d_A 517 VLEPTISKVKSLKSALEACVAILRIDTMITVDPEPPKE 554 (559)
T ss_dssp CCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCCCCC
T ss_pred CEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCccccc
Confidence 99999999999999999999999999999988776644
No 14
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-97 Score=815.23 Aligned_cols=463 Identities=19% Similarity=0.301 Sum_probs=425.6
Q ss_pred chhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhHHHHHHHhccc
Q 008181 33 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGATN 112 (575)
Q Consensus 33 ~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~qd 112 (575)
+++...|.+++..|+.||..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+ |+|++++|++||
T Consensus 3 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd 78 (515)
T 3iyg_H 3 GTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPA----AKTLVDIAKSQD 78 (515)
T ss_pred CccccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhh
Confidence 4567789999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCC--C----HHHHHHHHHHhcC---
Q 008181 113 KAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMIS--T----PEEITQVATISAN--- 183 (575)
Q Consensus 113 ~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~--~----~~~L~~va~ts~~--- 183 (575)
+++||||||+|+|+++||+++.+++++|+||..|++||++|.+.++++|+++++|++ + ++.|.++|+|+++
T Consensus 79 ~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~ 158 (515)
T 3iyg_H 79 AEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKL 158 (515)
T ss_pred ceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999999999999999999984 5 5678999999875
Q ss_pred ---CchHHHHHHHHHHHHhccc---CeE--EEecCCcccceEEEEeceEEeecccCCCCccCcCCCceeccCceeeeccc
Q 008181 184 ---GEREIGELLARAMEKVGKE---GVI--TVVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIYDK 255 (575)
Q Consensus 184 ---~~~~la~lv~ea~~~v~~~---~~I--~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d~ 255 (575)
++++|++++++|+.+++.+ +.| .+.+|++..|+ ++++|++|+++|.||||.+ +|.+++||+|+++|+
T Consensus 159 ~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~----~p~~~en~kIll~~~ 233 (515)
T 3iyg_H 159 ISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEM----QPKKYHNPMIALLNV 233 (515)
T ss_pred ccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCccccc----CCccccccEEEEEcc
Confidence 4689999999999999765 554 44578888887 9999999999999999865 456899999999999
Q ss_pred c-------------cCCHHHH-----------HHHHHHHHHhCCCEEEEecCchHHHHHHHHHhhcccCceEEEEecCCC
Q 008181 256 K-------------ISDMNSL-----------VGLLELAVEKNRALLIVAEDVERDALAMLILNKHHAGVKVCAIKAPGF 311 (575)
Q Consensus 256 ~-------------l~~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~ 311 (575)
+ +++++++ .++++++.+.|++|||++++|++.++++|.++ +|++++
T Consensus 234 ~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~------gI~~v~---- 303 (515)
T 3iyg_H 234 ELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR------DMFCAG---- 303 (515)
T ss_pred cccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHc------CCcccc----
Confidence 5 4455554 66789999999999999999999999999654 466654
Q ss_pred CCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEEe---eccEEEEecCCChhhHHHHHHHHHhhhhccCc
Q 008181 312 GDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTVS---VDDTIVLHGGGDKKLIEERCEEVCQTAMGKSA 388 (575)
Q Consensus 312 ~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~~---~~~~~~~~g~~~~~~i~~~~~~l~~~~l~~~~ 388 (575)
++++++|+|||++|||+++++ ++++++++||+|+.|++. ++++++|+||+++
T Consensus 304 -~~~k~~leria~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------------------- 358 (515)
T 3iyg_H 304 -RVPEEDLKRTMMACGGSIQTS-----VNALSSDVLGRCQVFEETQIGGERYNFFTGCPKA------------------- 358 (515)
T ss_pred -cccHHHHHHHHHHhCCEEeec-----cccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC-------------------
Confidence 568999999999999999999 999999999999999865 6899999997653
Q ss_pred chhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHHHHHhhhcc-Cch
Q 008181 389 ATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYATKALENLKTE-NED 466 (575)
Q Consensus 389 ~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~~L~~~~~~-~~~ 466 (575)
..|||+|||+|+++++|+||++||||+++|++++++ +|||||++|++++.+|++++.+ +++
T Consensus 359 -----------------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~ 421 (515)
T 3iyg_H 359 -----------------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGK 421 (515)
T ss_pred -----------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChH
Confidence 358999999999999999999999999999999985 9999999999999999999877 899
Q ss_pred hHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC---CCceeEecCCCcccccccCcccccHHHHHHHHHHHHHHH
Q 008181 467 QRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD---DVNFGFDAAKGEYVDMVKAGIIDPLKVVRTALADAASVS 543 (575)
Q Consensus 467 ~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a 543 (575)
+|+++++|++||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|
T Consensus 422 eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a 501 (515)
T 3iyg_H 422 QQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAA 501 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999887 356999999999999999999999999999999999999
Q ss_pred HHHhccchhhccC
Q 008181 544 LLFTTTEATVLVN 556 (575)
Q Consensus 544 ~~iL~iD~iI~~~ 556 (575)
++|||||++|.+.
T Consensus 502 ~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 502 CLIVSVDETIKNP 514 (515)
T ss_pred HHHHHHHHHhcCC
Confidence 9999999999753
No 15
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=9.6e-99 Score=830.03 Aligned_cols=477 Identities=19% Similarity=0.286 Sum_probs=428.0
Q ss_pred ccccccccchhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhHHH
Q 008181 25 VLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGANLV 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll 104 (575)
|+.+.+. .++..+|.+++..|+.||..|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+ |+|+
T Consensus 9 ~~~~l~~-~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll 83 (550)
T 3p9d_G 9 TIVVLKE-GTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPA----AKTL 83 (550)
T ss_dssp --------CCCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHH----HHHH
T ss_pred chhhhcC-CcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHH
Confidence 5555443 5788899999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HHHHhccccccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCCC-----HHHHHHHHH
Q 008181 105 KQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMIST-----PEEITQVAT 179 (575)
Q Consensus 105 ~~~s~~qd~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~~-----~~~L~~va~ 179 (575)
+++|++||+++||||||+|||+++||+++.+++++|+||..|++||++|++.++++|+++++|++. ++.|.++|+
T Consensus 84 ~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~ 163 (550)
T 3p9d_G 84 VDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCAR 163 (550)
T ss_dssp HHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHH
T ss_pred HHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999863 668999999
Q ss_pred HhcC------CchHHHHHHHHHHHHhcccC------eEEEecCCcccceEEEEeceEEeecccCCCCccCcCCCceeccC
Q 008181 180 ISAN------GEREIGELLARAMEKVGKEG------VITVVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELEN 247 (575)
Q Consensus 180 ts~~------~~~~la~lv~ea~~~v~~~~------~I~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~ 247 (575)
|+++ ++++|++|+++|+.+++++. .|.+++|++++|| ++++|++|+++|.||||.+ |+..++|
T Consensus 164 tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv~Gg~~~ds-~lv~G~~~dk~~~s~yf~~----~~~~~en 238 (550)
T 3p9d_G 164 TAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIPGGAMEES-LFINGVAFKKTFSYAGFEQ----QPKKFNN 238 (550)
T ss_dssp HHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBCCSSCGGGC-CCCSSEEECCCSSCTTCSC----SCSCCSS
T ss_pred HhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEecCCCccce-eEEeeEEEecccccccccc----CcccccC
Confidence 9874 36899999999999998432 2445569999998 9999999999999999864 6677999
Q ss_pred ceeeeccccc-------------CCHHHH-----------HHHHHHHHHhCCCEEEEecCchHHHHHHHHHhhcccCceE
Q 008181 248 PLILIYDKKI-------------SDMNSL-----------VGLLELAVEKNRALLIVAEDVERDALAMLILNKHHAGVKV 303 (575)
Q Consensus 248 ~kIll~d~~l-------------~~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~l~~n~~~~~~~i 303 (575)
|+|+++|++| ++++++ .++++++.+.|++|||++++|++.++++|.++ +|
T Consensus 239 ~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~------gI 312 (550)
T 3p9d_G 239 PKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADR------NI 312 (550)
T ss_dssp CCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGG------TC
T ss_pred ceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHc------CC
Confidence 9999999974 345444 34678899999999999999999999988644 47
Q ss_pred EEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEE---eeccEEEEecCCChhhHHHHHHHHH
Q 008181 304 CAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTV---SVDDTIVLHGGGDKKLIEERCEEVC 380 (575)
Q Consensus 304 ~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~---~~~~~~~~~g~~~~~~i~~~~~~l~ 380 (575)
++++ ++++++|+|||++|||+++++ ++++++++||+|+.|++ +++++++|+||+++
T Consensus 313 ~~v~-----~v~k~~lerIa~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~----------- 371 (550)
T 3p9d_G 313 FCAG-----RVSADDMNRVIQAVGGSIQST-----TSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQA----------- 371 (550)
T ss_dssp EEEE-----CCCTTHHHHHHHHTCCCCBSS-----GGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTC-----------
T ss_pred cccc-----CcCHHHHHHHHHHhCCceecc-----hhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCC-----------
Confidence 7766 557889999999999999999 99999999999999986 57899999997643
Q ss_pred hhhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHHHHHh
Q 008181 381 QTAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYATKALEN 459 (575)
Q Consensus 381 ~~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~~L~~ 459 (575)
+.|||+|||+|+++++|+||++||||+++|+++++| +|||||++|++++.+|++
T Consensus 372 -------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~ 426 (550)
T 3p9d_G 372 -------------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRD 426 (550)
T ss_dssp -------------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHH
T ss_pred -------------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence 458999999999999999999999999999999999 999999999999999999
Q ss_pred hhcc-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC---CCceeEecCCCcccccccCcccccHHHHHHH
Q 008181 460 LKTE-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD---DVNFGFDAAKGEYVDMVKAGIIDPLKVVRTA 535 (575)
Q Consensus 460 ~~~~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~ 535 (575)
++.+ ++++|+++++|++||+.||++||+|||+|+.+++++|++.| +.++|||+.+|++.||++.|||||+.||+++
T Consensus 427 ~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~a 506 (550)
T 3p9d_G 427 YSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINA 506 (550)
T ss_dssp HHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHH
T ss_pred HhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHHHH
Confidence 9877 89999999999999999999999999999999999999876 5689999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchhhccCCCCCCCC
Q 008181 536 LADAASVSLLFTTTEATVLVNSDDKNKP 563 (575)
Q Consensus 536 l~~A~e~a~~iL~iD~iI~~~~~~~~~~ 563 (575)
|++|+|+|++||+||++|...|+++++.
T Consensus 507 l~~A~~~a~~iL~id~ii~~~~~~~~~~ 534 (550)
T 3p9d_G 507 LNSATEATNLILSVDETITNKGSESANA 534 (550)
T ss_dssp HHHHHHHHHHHHTEEEEECCCCCC----
T ss_pred HHHHHHHHHHHHhHHHHhhCCCcccccC
Confidence 9999999999999999999887665433
No 16
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=9e-98 Score=824.19 Aligned_cols=482 Identities=20% Similarity=0.317 Sum_probs=428.1
Q ss_pred ccccCccccc-ccccchhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccc
Q 008181 19 KGVYGRVLCN-RNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAK 97 (575)
Q Consensus 19 ~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~ 97 (575)
.-+||+|+.+ +....++..+|.++|..|+.||..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~- 100 (562)
T 3p9d_E 22 QDEMGRPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEI- 100 (562)
T ss_dssp --------CCCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHH-
T ss_pred HHhcCCCeEEeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHH-
Confidence 4579999877 55434788999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhHHHHHHHhccccccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCCC------H
Q 008181 98 DVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMIST------P 171 (575)
Q Consensus 98 ~~ga~ll~~~s~~qd~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~~------~ 171 (575)
|+|++++|++||+++||||||+|+|+++||+++.+++++|+||..|++||++|.+.++++|+++++|++. +
T Consensus 101 ---Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~ 177 (562)
T 3p9d_E 101 ---AKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFR 177 (562)
T ss_dssp ---HHHHHHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCH
T ss_pred ---HHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998863 2
Q ss_pred HHHHHHHHHhcCC------chHHHHHHHHHHHHhccc-------C--eEEEecCCcccceEEEEeceEEeecccCCCCcc
Q 008181 172 EEITQVATISANG------EREIGELLARAMEKVGKE-------G--VITVVDGNTMVNELEVVGGMKLARGYISPYFVT 236 (575)
Q Consensus 172 ~~L~~va~ts~~~------~~~la~lv~ea~~~v~~~-------~--~I~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~ 236 (575)
+.|.++|+||+++ .++|++++++|+..+.+. + .|.+.+|++++|+ ++++|++|+++|.||+|++
T Consensus 178 e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m~~ 256 (562)
T 3p9d_E 178 DFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQMPK 256 (562)
T ss_dssp HHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESSEEESSCCCTTSCCC
T ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeeeEEEecCCCCCCcCc
Confidence 6899999999875 468999999999988642 1 2566789999998 9999999999999999765
Q ss_pred CcCCCceeccCceeeeccccc-------------CCHHH-----------HHHHHHHHHHhCCCEEEEecCchHHHHHHH
Q 008181 237 DPKTQKCELENPLILIYDKKI-------------SDMNS-----------LVGLLELAVEKNRALLIVAEDVERDALAML 292 (575)
Q Consensus 237 ~~~~~~~~l~~~kIll~d~~l-------------~~~~~-----------l~~~le~i~~~~~~lvI~~~~i~~~al~~l 292 (575)
... ....+++++|+++++++ +++++ +.++++++.+.|+||||++++|+++++++|
T Consensus 257 ~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L 335 (562)
T 3p9d_E 257 CVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLL 335 (562)
T ss_dssp ------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHH
T ss_pred ccc-cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHH
Confidence 321 12223799999888764 23444 678899999999999999999999999999
Q ss_pred HHhhcccCceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEE-----eeccEEEEecCC
Q 008181 293 ILNKHHAGVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTV-----SVDDTIVLHGGG 367 (575)
Q Consensus 293 ~~n~~~~~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~-----~~~~~~~~~g~~ 367 (575)
..|+ |.+++++ ++++|+|||++|||+++++ ++++++++||+|+.|++ ++++++||+||+
T Consensus 336 ~~~~------I~~v~~v-----~k~~le~ia~~TGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~ 399 (562)
T 3p9d_E 336 LQND------LPAVRWV-----GGQELEHIAISTNGRIVPR-----FQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSK 399 (562)
T ss_dssp HTTT------CCCEECC-----CTTTHHHHHHHHCCCEEES-----SSCCCTTSCEECSCEEEECCSSSSCCEEEECCCS
T ss_pred HHCC------CEEEecc-----CHHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEEEEeccCCceEEEEecCC
Confidence 9886 5677754 6778999999999999999 99999999999999997 358999999987
Q ss_pred ChhhHHHHHHHHHhhhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCc
Q 008181 368 DKKLIEERCEEVCQTAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGG 446 (575)
Q Consensus 368 ~~~~i~~~~~~l~~~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGG 446 (575)
++ ..|||+|||+|+++++|+||++||||+++|+++++| +||||
T Consensus 400 ~~------------------------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGG 443 (562)
T 3p9d_E 400 ET------------------------------------KTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGG 443 (562)
T ss_dssp CC------------------------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETT
T ss_pred CC------------------------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCC
Confidence 54 347899999999999999999999999999999999 99999
Q ss_pred cHHHHHHHHHHHhhhcc-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC----CCceeEecCCCcccccc
Q 008181 447 GVALLYATKALENLKTE-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD----DVNFGFDAAKGEYVDMV 521 (575)
Q Consensus 447 Ga~E~~l~~~L~~~~~~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~----~~~~Gid~~~g~i~d~~ 521 (575)
|++|++++.+|++++.+ ++++|+++++|++||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||+
T Consensus 444 Ga~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~ 523 (562)
T 3p9d_E 444 GAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMK 523 (562)
T ss_dssp THHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTT
T ss_pred cHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchH
Confidence 99999999999999877 78999999999999999999999999999999999999865 46799999999999999
Q ss_pred cCcccccHHHHHHHHHHHHHHHHHHhccchhhccCCC
Q 008181 522 KAGIIDPLKVVRTALADAASVSLLFTTTEATVLVNSD 558 (575)
Q Consensus 522 ~~gI~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~ 558 (575)
+.|||||+.||+++|++|+|+|++|||||++|...+.
T Consensus 524 ~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 524 ELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp TTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC-
T ss_pred hccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999999999999999999987543
No 17
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=3.2e-98 Score=822.89 Aligned_cols=464 Identities=20% Similarity=0.281 Sum_probs=429.1
Q ss_pred chhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhHHHHHHHhccc
Q 008181 33 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGATN 112 (575)
Q Consensus 33 ~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~qd 112 (575)
.++..+|.++|..|+.||..|+++|+|||||+||+|||+++.|+++|||||+||+|+|+++||+ |+|++++|++||
T Consensus 11 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~qd 86 (528)
T 3p9d_D 11 FKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPV----ARMLVEVSAAQD 86 (528)
T ss_dssp SCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTT----HHHHHHHHHHHH
T ss_pred cchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHH----HHHHHHHHHHhh
Confidence 4788999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCC--CHHHHHHHHHHhcCC------
Q 008181 113 KAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMIS--TPEEITQVATISANG------ 184 (575)
Q Consensus 113 ~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~ts~~~------ 184 (575)
+++||||||+|+|+++||+++.+++++|+||..|++||++|.+.++++|+++++|++ +++.|.++|+||+++
T Consensus 87 ~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~ 166 (528)
T 3p9d_D 87 SEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQY 166 (528)
T ss_dssp HHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTT
T ss_pred hhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccchh
Confidence 999999999999999999999999999999999999999999999999999999987 789999999999976
Q ss_pred chHHHHHHHHHHHHhcc--cCe-------EEEecCCcccceEEEEeceEEeecccCCCCccCcCCCceeccCceeeeccc
Q 008181 185 EREIGELLARAMEKVGK--EGV-------ITVVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIYDK 255 (575)
Q Consensus 185 ~~~la~lv~ea~~~v~~--~~~-------I~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d~ 255 (575)
+++|++|+++|+.++++ ++. |.+.+|++++|+ ++++|++|+++|.||+| |++.++||+|+++|+
T Consensus 167 ~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~~ien~kIll~~~ 239 (528)
T 3p9d_D 167 SSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPTRKEKAKIGLIQF 239 (528)
T ss_dssp HHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCSEESSEEEEEECC
T ss_pred HHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc------CcccccCceEEEEec
Confidence 58999999999999986 343 344569999887 99999999999999985 788999999999999
Q ss_pred ccC-------------CHH-----------HHHHHHHHHHHhCCCEEEEecCc-----hHHHHHHHHHhhcccCceEEEE
Q 008181 256 KIS-------------DMN-----------SLVGLLELAVEKNRALLIVAEDV-----ERDALAMLILNKHHAGVKVCAI 306 (575)
Q Consensus 256 ~l~-------------~~~-----------~l~~~le~i~~~~~~lvI~~~~i-----~~~al~~l~~n~~~~~~~i~~v 306 (575)
+|+ +++ .+.++++++.+.|+||||++++| +++++++|..++ |++|
T Consensus 240 ~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~------I~av 313 (528)
T 3p9d_D 240 QISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLN------IMVV 313 (528)
T ss_dssp CSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTS------CCEE
T ss_pred cccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcC------cEEE
Confidence 875 333 36788999999999999999999 999999998764 8888
Q ss_pred ecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEEe---eccEEEEecCCChhhHHHHHHHHHhhh
Q 008181 307 KAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTVS---VDDTIVLHGGGDKKLIEERCEEVCQTA 383 (575)
Q Consensus 307 k~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~~---~~~~~~~~g~~~~~~i~~~~~~l~~~~ 383 (575)
++ +++++|+|||++|||+++++ ++++++++||+|+.|++. ++++++|++|.+..
T Consensus 314 ~~-----~~k~~le~ia~~tGa~ii~~-----~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~------------- 370 (528)
T 3p9d_D 314 KD-----IEREEIEFLSKGLGCKPIAD-----IELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN------------- 370 (528)
T ss_dssp EC-----CCTHHHHHHHHHHTCCCCSC-----STTCCSSSEEEESCEECCEETTEECCBCTTBCCGG-------------
T ss_pred Ee-----CCHHHHHHHHHHHCCEEecc-----cccCCHHHCCcccEEEEEEECCEEEEEEEcccccC-------------
Confidence 84 47889999999999999999 889999999999999854 46778888764210
Q ss_pred hccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHHHHHhhhc
Q 008181 384 MGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYATKALENLKT 462 (575)
Q Consensus 384 l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~~L~~~~~ 462 (575)
.+++|||+|||+|+++++|+||++|||++++|+++++| +|||||++|++++.+|++++.
T Consensus 371 --------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~ 430 (528)
T 3p9d_D 371 --------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEAR 430 (528)
T ss_dssp --------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCT
T ss_pred --------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhh
Confidence 14679999999999999999999999999999999999 999999999999999999987
Q ss_pred c-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC---CCceeEecCCCcccccccCcccccHHHHHHHHHH
Q 008181 463 E-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD---DVNFGFDAAKGEYVDMVKAGIIDPLKVVRTALAD 538 (575)
Q Consensus 463 ~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l~~ 538 (575)
+ ++++|+++++|++||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|++
T Consensus 431 ~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~ 510 (528)
T 3p9d_D 431 SMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAITL 510 (528)
T ss_dssp TSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHH
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHHHHHHHHHH
Confidence 6 78999999999999999999999999999999999999887 4679999999999999999999999999999999
Q ss_pred HHHHHHHHhccchhhccC
Q 008181 539 AASVSLLFTTTEATVLVN 556 (575)
Q Consensus 539 A~e~a~~iL~iD~iI~~~ 556 (575)
|+|+|++|||||+||+.+
T Consensus 511 A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 511 ASECVKSILRIDDIAFSR 528 (528)
T ss_dssp HHHHHHHHHHCSCCCBCC
T ss_pred HHHHHHHHHhhhHheecC
Confidence 999999999999999753
No 18
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.8e-96 Score=807.46 Aligned_cols=459 Identities=20% Similarity=0.317 Sum_probs=422.0
Q ss_pred hhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhHHHHHHHhcccc
Q 008181 34 KDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGATNK 113 (575)
Q Consensus 34 ~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~qd~ 113 (575)
++...|.+++..|+.||..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+ |||++++|++||+
T Consensus 2 ~~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~ 77 (515)
T 3iyg_G 2 TKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPA----AKSMIEISRTQDE 77 (515)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHH----HHHHHHHHHHhhh
Confidence 456789999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred ccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCC--CHHHHHHHHHHhcCC------c
Q 008181 114 AAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMIS--TPEEITQVATISANG------E 185 (575)
Q Consensus 114 ~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~ts~~~------~ 185 (575)
++||||||+|+|+++||+++.+++++|+||..|++||++|.+.++++|+++++|++ +++.|.++|+|++++ .
T Consensus 78 e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~ 157 (515)
T 3iyg_G 78 EVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWS 157 (515)
T ss_pred hhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHH
Confidence 99999999999999999999999999999999999999999999999999999887 478899999999875 3
Q ss_pred hHHHHHHHHHHHHhccc--C----------eEEEecCCcccceEEEEeceEEeecccCCCCccCcCCCceeccCceeeec
Q 008181 186 REIGELLARAMEKVGKE--G----------VITVVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIY 253 (575)
Q Consensus 186 ~~la~lv~ea~~~v~~~--~----------~I~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~ 253 (575)
+++++++++|+..+.++ + .|.+.+|++++|+ ++++|++|+++|.||. |++.++||+|+++
T Consensus 158 ~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~ 229 (515)
T 3iyg_G 158 SLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLL 229 (515)
T ss_pred HHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeEEEeCCCCCCC-------CcceeeeeEEEEE
Confidence 57789999999988622 2 2456789999987 9999999999999985 6789999999999
Q ss_pred ccc-------------cCCHHHHHHHHH-----------HHHHhCCCEEEEecCchHHHHHHHHHhhcccCceEEEEecC
Q 008181 254 DKK-------------ISDMNSLVGLLE-----------LAVEKNRALLIVAEDVERDALAMLILNKHHAGVKVCAIKAP 309 (575)
Q Consensus 254 d~~-------------l~~~~~l~~~le-----------~i~~~~~~lvI~~~~i~~~al~~l~~n~~~~~~~i~~vk~~ 309 (575)
|++ +++++++.++++ ++.+.|++|||++++|++.++++|.++ +|++++
T Consensus 230 ~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~------~I~av~-- 301 (515)
T 3iyg_G 230 DSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRA------NITAIR-- 301 (515)
T ss_pred cccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHC------Cceeec--
Confidence 994 456777766665 899999999999999999999999765 478765
Q ss_pred CCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcc-eeEEEEe---eccEEEEecCCChhhHHHHHHHHHhhhhc
Q 008181 310 GFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGT-AKKVTVS---VDDTIVLHGGGDKKLIEERCEEVCQTAMG 385 (575)
Q Consensus 310 ~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~-~~~v~~~---~~~~~~~~g~~~~~~i~~~~~~l~~~~l~ 385 (575)
++++++|+|||++|||+++++ ++++++++||+ |+.|++. +++|+||+||+++
T Consensus 302 ---~~~k~~leria~~tGa~ii~~-----l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~---------------- 357 (515)
T 3iyg_G 302 ---RVRKTDNNRIARACGARIVSR-----PEELREEDVGTGAGLLEIKKIGDEYFTFITECKDP---------------- 357 (515)
T ss_pred ---cCCHHHHHHHHHHhCCeeecc-----ccccChhhcCCcccEEEEEEECCceEEEEeCCCCC----------------
Confidence 668999999999999999999 99999999999 9999864 4689999998754
Q ss_pred cCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHHHHHhhhcc-
Q 008181 386 KSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYATKALENLKTE- 463 (575)
Q Consensus 386 ~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~~L~~~~~~- 463 (575)
..|||+|||+|+++++|+||++||||+++|++++++ +|||||++|++++.+|++++.+
T Consensus 358 --------------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~ 417 (515)
T 3iyg_G 358 --------------------KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAM 417 (515)
T ss_pred --------------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhcc
Confidence 358999999999999999999999999999999776 9999999999999999999877
Q ss_pred CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC----CCceeEecCCCcccccccCcccccHHHHHHHHHHH
Q 008181 464 NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD----DVNFGFDAAKGEYVDMVKAGIIDPLKVVRTALADA 539 (575)
Q Consensus 464 ~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~----~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l~~A 539 (575)
++++|+++++|++||+.||++||+|||+|+.+++++|++.| +.++|||+.+|++.||++.|||||+.||+++|++|
T Consensus 418 ~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A 497 (515)
T 3iyg_G 418 TGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTA 497 (515)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999876 34799999999999999999999999999999999
Q ss_pred HHHHHHHhccchhhccC
Q 008181 540 ASVSLLFTTTEATVLVN 556 (575)
Q Consensus 540 ~e~a~~iL~iD~iI~~~ 556 (575)
+|+|++|||||++|...
T Consensus 498 ~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 498 VETAVLLLRIDDIVSGH 514 (515)
T ss_pred HHHHHHHHHHHheeecC
Confidence 99999999999999753
No 19
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-96 Score=808.33 Aligned_cols=459 Identities=21% Similarity=0.310 Sum_probs=423.0
Q ss_pred hhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhHHHHHHHhcccc
Q 008181 34 KDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGATNK 113 (575)
Q Consensus 34 ~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~qd~ 113 (575)
++..+|.++|..|+.||..|+++|+|||||+||+|||+++.|+++|||||+||+|+|+++||+ |+|++++|++||+
T Consensus 4 ~~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~ 79 (518)
T 3iyg_D 4 QDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPA----ARMLVELSKAQDI 79 (518)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHH----HHHHHHHHHHhhh
Confidence 567789999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred ccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCC--CHHHHHHHHHHhcCCc------
Q 008181 114 AAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMIS--TPEEITQVATISANGE------ 185 (575)
Q Consensus 114 ~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~ts~~~~------ 185 (575)
++||||||+|+|+++||+++.+++++|+||..|++||++|.+.++++|+++++|++ +++.|.++|+||++++
T Consensus 80 ~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~ 159 (518)
T 3iyg_D 80 EAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYS 159 (518)
T ss_pred hhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhH
Confidence 99999999999999999999999999999999999999999999999999999987 7889999999999875
Q ss_pred hHHHHHHHHHHHHhcc---cCe-----EE--EecCCcccceEEEEeceEEeecccCCCCccCcCCCceeccCceeeeccc
Q 008181 186 REIGELLARAMEKVGK---EGV-----IT--VVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIYDK 255 (575)
Q Consensus 186 ~~la~lv~ea~~~v~~---~~~-----I~--~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d~ 255 (575)
++|++|+++|+.++++ ++. |. +..|++..|+ ++++|++|+++|.| . ||..++||+|+++++
T Consensus 160 ~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~-~-------mp~~i~n~kIlll~~ 230 (518)
T 3iyg_D 160 SLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN-S-------GITRVEKAKIGLIQF 230 (518)
T ss_pred HHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc-C-------CCccccCceEEEEEe
Confidence 8999999999999985 443 43 4478888887 99999999999987 3 566778999999888
Q ss_pred ccC-------------CHH-----------HHHHHHHHHHHhCCCEEEE-----ecCchHHHHHHHHHhhcccCceEEEE
Q 008181 256 KIS-------------DMN-----------SLVGLLELAVEKNRALLIV-----AEDVERDALAMLILNKHHAGVKVCAI 306 (575)
Q Consensus 256 ~l~-------------~~~-----------~l~~~le~i~~~~~~lvI~-----~~~i~~~al~~l~~n~~~~~~~i~~v 306 (575)
+|+ +++ ++.++++++.+.|+||||+ +++|+++++++|..+ +|++|
T Consensus 231 ~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~------~I~av 304 (518)
T 3iyg_D 231 CLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKM------KIMVV 304 (518)
T ss_pred eccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHc------CcEEE
Confidence 753 333 3678899999999999999 899999999999877 48999
Q ss_pred ecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEEe---e-ccEEEEecCCChhhHHHHHHHHHhh
Q 008181 307 KAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTVS---V-DDTIVLHGGGDKKLIEERCEEVCQT 382 (575)
Q Consensus 307 k~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~~---~-~~~~~~~g~~~~~~i~~~~~~l~~~ 382 (575)
++|+ +.+|+|||++|||+++++ ++++++++||+|+.|++. + +++++|++|++
T Consensus 305 ~~~~-----~~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~-------------- 360 (518)
T 3iyg_D 305 KDIE-----REDIEFICKTIGTKPVAH-----VDQFTADMLGSAELAEEVSLNGSGKLIKITGCAS-------------- 360 (518)
T ss_pred ecCC-----HHHHHHHHHHhCCEEecc-----cccCCHHHCCcCcEEEEEEeCCCceEEEEECCCC--------------
Confidence 9875 458999999999999999 999999999999999864 3 57889998753
Q ss_pred hhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHHHHHhhh
Q 008181 383 AMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYATKALENLK 461 (575)
Q Consensus 383 ~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~~L~~~~ 461 (575)
.+++|||+|||+|+++++|+||++|||++++|+++++| +|||||++|++++.+|++++
T Consensus 361 ---------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~ 419 (518)
T 3iyg_D 361 ---------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYS 419 (518)
T ss_pred ---------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHh
Confidence 14679999999999999999999999999999999999 99999999999999999998
Q ss_pred cc-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC---CCceeEecCCCcccccccCcccccHHHHHHHHH
Q 008181 462 TE-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD---DVNFGFDAAKGEYVDMVKAGIIDPLKVVRTALA 537 (575)
Q Consensus 462 ~~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l~ 537 (575)
.+ ++++|+++++|++||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|+
T Consensus 420 ~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~ 499 (518)
T 3iyg_D 420 RTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALT 499 (518)
T ss_pred hcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHHHHHHHHH
Confidence 77 78999999999999999999999999999999999999876 357999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchhhccC
Q 008181 538 DAASVSLLFTTTEATVLVN 556 (575)
Q Consensus 538 ~A~e~a~~iL~iD~iI~~~ 556 (575)
+|+|+|++|||||+||+++
T Consensus 500 ~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 500 LATETVRSILKIDDVVNTR 518 (518)
T ss_pred HHHHHHHHHHhhcceEecC
Confidence 9999999999999999753
No 20
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.6e-96 Score=805.64 Aligned_cols=458 Identities=19% Similarity=0.318 Sum_probs=421.9
Q ss_pred hhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhHHHHHHHhcccc
Q 008181 34 KDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGATNK 113 (575)
Q Consensus 34 ~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~qd~ 113 (575)
++..+|.++|..|+.||..|+++|+|||||+||+|||+++.|+++|||||+||+|+|+++||+ |+|++++|++||+
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~----Akll~~~a~~qd~ 78 (515)
T 3iyg_E 3 KSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQI----AKLMVELSKSQDD 78 (515)
T ss_pred chhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHH----HHHHHHHHHHhhh
Confidence 567899999999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred ccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCCC----HHHHHHHHHHhcCC-----
Q 008181 114 AAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMIST----PEEITQVATISANG----- 184 (575)
Q Consensus 114 ~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~~----~~~L~~va~ts~~~----- 184 (575)
++||||||+|+|+++||+++.+++.+|+||..|++||++|.+.++++|+++++|++. ++.|.++|+||+++
T Consensus 79 ~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~ 158 (515)
T 3iyg_E 79 EIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNS 158 (515)
T ss_pred hhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhH
Confidence 999999999999999999999999999999999999999999999999999988853 68899999999876
Q ss_pred -chHHHHHHHHHHHHhccc-------C--eEEEecCCcccceEEEEeceEEeecccCCCCccCcCCCceeccCceeeecc
Q 008181 185 -EREIGELLARAMEKVGKE-------G--VITVVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIYD 254 (575)
Q Consensus 185 -~~~la~lv~ea~~~v~~~-------~--~I~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d 254 (575)
.+.|++++++|+..+.+. + .|.+.+|++++|+ ++++|++|+++|.|||| ++.+++|+|++++
T Consensus 159 ~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~m-------~~~~~~~kIall~ 230 (515)
T 3iyg_E 159 CHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQM-------PKQVEDAKIAILT 230 (515)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEEEecccccccc-------cccCCCceEEEEc
Confidence 468999999999988641 1 2556789999987 99999999999999985 5566888888888
Q ss_pred ccc-------------CCHHHH-----------HHHHHHHHHhCCCEEEEecCchHHHHHHHHHhhcccCceEEEEecCC
Q 008181 255 KKI-------------SDMNSL-----------VGLLELAVEKNRALLIVAEDVERDALAMLILNKHHAGVKVCAIKAPG 310 (575)
Q Consensus 255 ~~l-------------~~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~l~~n~~~~~~~i~~vk~~~ 310 (575)
+++ ++++++ .++++++.+.|+||||++++|+++++++|..|+ |.+++++
T Consensus 231 ~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~------I~~v~~v- 303 (515)
T 3iyg_E 231 CPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQND------LPAVRWV- 303 (515)
T ss_pred CccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCC------CEEEecc-
Confidence 764 345554 678999999999999999999999999999885 6777754
Q ss_pred CCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEE-----eeccEEEEecCCChhhHHHHHHHHHhhhhc
Q 008181 311 FGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTV-----SVDDTIVLHGGGDKKLIEERCEEVCQTAMG 385 (575)
Q Consensus 311 ~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~-----~~~~~~~~~g~~~~~~i~~~~~~l~~~~l~ 385 (575)
++.+|+|||++|||+++++ ++++++++||+|+.|++ ++++++||+||+++
T Consensus 304 ----~k~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~---------------- 358 (515)
T 3iyg_E 304 ----GGPEIELIAIATGGRIVPR-----FSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNS---------------- 358 (515)
T ss_pred ----CHHHHHHHHHHhCCEEecc-----cccCCHHHCCcceEEEEEEeccccceEEEEEcCCCC----------------
Confidence 6889999999999999999 99999999999999987 34799999998754
Q ss_pred cCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHHHHHhhhcc-
Q 008181 386 KSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYATKALENLKTE- 463 (575)
Q Consensus 386 ~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~~L~~~~~~- 463 (575)
..+||+|||+|+++++|+||+++|||+++|+++++| +|||||++|++++.+|++|+.+
T Consensus 359 --------------------~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~ 418 (515)
T 3iyg_E 359 --------------------RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKC 418 (515)
T ss_pred --------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccC
Confidence 347999999999999999999999999999999999 9999999999999999999877
Q ss_pred CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC----CCceeEecCCCcccccccCcccccHHHHHHHHHHH
Q 008181 464 NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD----DVNFGFDAAKGEYVDMVKAGIIDPLKVVRTALADA 539 (575)
Q Consensus 464 ~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~----~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l~~A 539 (575)
++++|+++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|++.||++.|||||+.||+++|++|
T Consensus 419 ~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A 498 (515)
T 3iyg_E 419 PTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQISLA 498 (515)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999865 36799999999999999999999999999999999
Q ss_pred HHHHHHHhccchhhcc
Q 008181 540 ASVSLLFTTTEATVLV 555 (575)
Q Consensus 540 ~e~a~~iL~iD~iI~~ 555 (575)
+|+|++|||||++|++
T Consensus 499 ~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 499 TQMVRMILKIDDIRKP 514 (515)
T ss_pred HHHHHHHHhHHHhhcC
Confidence 9999999999999975
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=9.2e-98 Score=820.38 Aligned_cols=466 Identities=22% Similarity=0.336 Sum_probs=424.5
Q ss_pred chhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeec-CCCCeEEecChHHHhccccccCccchhhhHHHHHHHhcc
Q 008181 33 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEK-SIGNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGAT 111 (575)
Q Consensus 33 ~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~-~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~q 111 (575)
.++..+|.++|..|+.||..|+++|+|||||+||||||++ +.|+++|||||+||+|+|+++||. |||++++|++|
T Consensus 9 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~----Akll~e~a~~q 84 (527)
T 3p9d_B 9 QVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPA----AKVLVNISKVQ 84 (527)
T ss_dssp CEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHH----HHHHHHHHHHH
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHH----HHHHHHHHHHh
Confidence 5889999999999999999999999999999999999999 899999999999999999999997 99999999999
Q ss_pred ccccCCccchHHHHHHHHHHHHHHhhhC-CCChHHHHHHHHHHHHHHHHHHHhhcccCCC-----HHHHHHHHHHhcCC-
Q 008181 112 NKAAGDGTTCATVLTQAILTEGCKSVAA-GVNVMDLRSGIKMAIDAVISDLKSRAQMIST-----PEEITQVATISANG- 184 (575)
Q Consensus 112 d~~~GDGTTs~vvLa~~Ll~~~~~li~~-gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~~-----~~~L~~va~ts~~~- 184 (575)
|+++||||||+|+|+++||+++.+++.+ |+||..|++||++|.+.++++|+++++++++ ++.|.++|+||+++
T Consensus 85 d~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK 164 (527)
T 3p9d_B 85 DDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSK 164 (527)
T ss_dssp HHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred HhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccC
Confidence 9999999999999999999999999999 9999999999999999999999999999985 78899999999986
Q ss_pred -----chHHHHHHHHHHHHhcccC---eEEE--ecCCcccceEEEEeceEEeecccCCCCccCcCCCceeccCceeeecc
Q 008181 185 -----EREIGELLARAMEKVGKEG---VITV--VDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIYD 254 (575)
Q Consensus 185 -----~~~la~lv~ea~~~v~~~~---~I~~--~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d 254 (575)
+++|++|+++|+.++++++ .|.+ ..|++..|+ ++++|++|+++|.||| +..++||+|+++|
T Consensus 165 ~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~--------p~~~~n~kIlll~ 235 (527)
T 3p9d_B 165 ILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ--------PKRIENAKILIAN 235 (527)
T ss_dssp GGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC--------CSCCSSCEEEEEC
T ss_pred cccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC--------CeeeecceEEEec
Confidence 6899999999999999876 4544 468998887 9999999999999986 3456899999988
Q ss_pred cccC--------------CHHHH-----------HHHHHHHHHhCCCEEEEecCchHHHHHHHHHhhcccCceEEEEecC
Q 008181 255 KKIS--------------DMNSL-----------VGLLELAVEKNRALLIVAEDVERDALAMLILNKHHAGVKVCAIKAP 309 (575)
Q Consensus 255 ~~l~--------------~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~l~~n~~~~~~~i~~vk~~ 309 (575)
++|+ +++++ .++++++.+.|++|||++++|+++++++|..++ |++|+++
T Consensus 236 ~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~------i~av~~~ 309 (527)
T 3p9d_B 236 TTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLG------INSIEHA 309 (527)
T ss_dssp SCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTC------BCCCCCC
T ss_pred cccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCC------CEEEecC
Confidence 7643 34443 577888999999999999999999999999874 7888865
Q ss_pred CCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEE---EeeccEEEEecCCChhhHHHHHHHHHhhhhcc
Q 008181 310 GFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVT---VSVDDTIVLHGGGDKKLIEERCEEVCQTAMGK 386 (575)
Q Consensus 310 ~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~---~~~~~~~~~~g~~~~~~i~~~~~~l~~~~l~~ 386 (575)
++.+|+||+++|||+++++ ++++++++||+|+.|+ ++++++++|.||++
T Consensus 310 -----~~~dle~ia~~tGa~iv~~-----~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------------ 361 (527)
T 3p9d_B 310 -----DFEGVERLALVTGGEVVST-----FDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKA------------------ 361 (527)
T ss_dssp -----HHHHHHHHHHHTCCCCCST-----TSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCC------------------
T ss_pred -----CHHHHHHHHHHhCCEEecc-----hhhCCHHHCCCCcEEEEEEecceEEEEEECCCC------------------
Confidence 5678999999999999999 8999999999999998 46789999998753
Q ss_pred CcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHHHHHhhhcc-C
Q 008181 387 SAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYATKALENLKTE-N 464 (575)
Q Consensus 387 ~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~~L~~~~~~-~ 464 (575)
+++|||+|||+|+++++|+||+++|||+++|+++++| +|||||++|++++.+|++++.+ +
T Consensus 362 ------------------~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~ 423 (527)
T 3p9d_B 362 ------------------GEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNID 423 (527)
T ss_dssp ------------------SCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHC
T ss_pred ------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccC
Confidence 3579999999999999999999999999999999999 9999999999999999999876 8
Q ss_pred chhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC---CCceeEecCCCcccccccCcccccHHHHHHHHHHHHH
Q 008181 465 EDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD---DVNFGFDAAKGEYVDMVKAGIIDPLKVVRTALADAAS 541 (575)
Q Consensus 465 ~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e 541 (575)
+++|+++++|++||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|
T Consensus 424 g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e 503 (527)
T 3p9d_B 424 GKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASE 503 (527)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999876 4689999999999999999999999999999999999
Q ss_pred HHHHHhccchhhccCCCCCCCC
Q 008181 542 VSLLFTTTEATVLVNSDDKNKP 563 (575)
Q Consensus 542 ~a~~iL~iD~iI~~~~~~~~~~ 563 (575)
+|++|||+|++|...|+++++-
T Consensus 504 ~a~~iL~id~ii~~~~~~~~~~ 525 (527)
T 3p9d_B 504 AAEVLLRVDNIIRARPRTANRQ 525 (527)
T ss_dssp HHHHHHHCCEEEEEC-------
T ss_pred HHHHHHhHHHHHhcCCcccCCC
Confidence 9999999999999887765443
No 22
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.4e-95 Score=796.99 Aligned_cols=457 Identities=20% Similarity=0.333 Sum_probs=417.5
Q ss_pred hhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhHHHHHHHhcccc
Q 008181 34 KDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGATNK 113 (575)
Q Consensus 34 ~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~qd~ 113 (575)
.+..+|.+++..|+.||+.|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+ |+|++++|++||+
T Consensus 3 ~~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~----akll~~~a~~qd~ 78 (517)
T 3iyg_Z 3 AEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPT----ASLIAKVATAQDD 78 (517)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred ccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCC-CHHHHHHHHHHhcCC------ch
Q 008181 114 AAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMIS-TPEEITQVATISANG------ER 186 (575)
Q Consensus 114 ~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~-~~~~L~~va~ts~~~------~~ 186 (575)
++||||||+|+|+++||+++.+++++|+||..|++||++|.+.++++|+++++|++ +++.|.++|+||+++ .+
T Consensus 79 e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d 158 (517)
T 3iyg_Z 79 ITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELAD 158 (517)
T ss_pred HhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999988 788999999999875 47
Q ss_pred HHHHHHHHHHHHhcccC--------eEEEecCCcccceEEEEeceEEeecccCCCCccCcCCCceeccCceeeecccccC
Q 008181 187 EIGELLARAMEKVGKEG--------VITVVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIYDKKIS 258 (575)
Q Consensus 187 ~la~lv~ea~~~v~~~~--------~I~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d~~l~ 258 (575)
+|++++++|+..+.+.+ .|.+.+|++..|+ ++++|++|+++|.||+ |+++++||+|+++|++|+
T Consensus 159 ~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le 230 (517)
T 3iyg_Z 159 VLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLE 230 (517)
T ss_pred HHHHHHHHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEeccCCCCC-------ccccccCCeEEEeccccc
Confidence 89999999998875432 3667889999887 9999999999999997 678899999999999763
Q ss_pred -------------CHHHH-----------HHHHHHHHHhCCC---------EEEEecCchHHHHHHHHHhhcccCceEEE
Q 008181 259 -------------DMNSL-----------VGLLELAVEKNRA---------LLIVAEDVERDALAMLILNKHHAGVKVCA 305 (575)
Q Consensus 259 -------------~~~~l-----------~~~le~i~~~~~~---------lvI~~~~i~~~al~~l~~n~~~~~~~i~~ 305 (575)
+++++ ...++.+...+.+ |||++++|+++++++|.++ +|++
T Consensus 231 ~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~------gI~~ 304 (517)
T 3iyg_Z 231 YEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKE------GIIA 304 (517)
T ss_pred ccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHC------CCEE
Confidence 33332 3456666666544 3666799999999999876 4788
Q ss_pred EecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCccc-CcceeEE---EEeeccEEEEecCCChhhHHHHHHHHHh
Q 008181 306 IKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEM-LGTAKKV---TVSVDDTIVLHGGGDKKLIEERCEEVCQ 381 (575)
Q Consensus 306 vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~-lG~~~~v---~~~~~~~~~~~g~~~~~~i~~~~~~l~~ 381 (575)
|++ +++++|+|||++|||+++++ ++++++++ ||+|+ | ++++++++||+||+++.
T Consensus 305 v~~-----v~~~~leria~~tGa~iv~~-----l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~----------- 362 (517)
T 3iyg_Z 305 LRR-----AKRRNMERLTLACGGIALNS-----LDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPR----------- 362 (517)
T ss_pred EEe-----cCHHHHHHHHHHhCCEEecc-----hhhCcccccCCcce-EEEEEEcCceEEEEeCCCCch-----------
Confidence 885 46889999999999999999 99999999 99999 9 46788999999987542
Q ss_pred hhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHHHHHhh
Q 008181 382 TAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYATKALENL 460 (575)
Q Consensus 382 ~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~~L~~~ 460 (575)
.|||+|||+|+++++|+||++|||||++|+++++| +|||||++|++++.+|++|
T Consensus 363 -------------------------~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~ 417 (517)
T 3iyg_Z 363 -------------------------SVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKY 417 (517)
T ss_pred -------------------------hheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHH
Confidence 37999999999999999999999999999999999 9999999999999999999
Q ss_pred hcc-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC---CCceeEecCCCcccccccCcccccHHHHHHHH
Q 008181 461 KTE-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD---DVNFGFDAAKGEYVDMVKAGIIDPLKVVRTAL 536 (575)
Q Consensus 461 ~~~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l 536 (575)
+.+ ++++|+++++|++||+.+|++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|
T Consensus 418 ~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al 497 (517)
T 3iyg_Z 418 KPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLL 497 (517)
T ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeecHHHHHHHH
Confidence 887 89999999999999999999999999999999999999887 46799999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchhhcc
Q 008181 537 ADAASVSLLFTTTEATVLV 555 (575)
Q Consensus 537 ~~A~e~a~~iL~iD~iI~~ 555 (575)
++|+|+|++|||||++|.+
T Consensus 498 ~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 498 HSCTVIATNILLVDEIMRA 516 (517)
T ss_pred HHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999864
No 23
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.3e-95 Score=794.75 Aligned_cols=458 Identities=19% Similarity=0.294 Sum_probs=418.6
Q ss_pred chhhccc-HHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhHHHHHHHhcc
Q 008181 33 AKDINFG-VGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGAT 111 (575)
Q Consensus 33 ~~~~~~g-~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~q 111 (575)
+.+...| ++++..|+.||..|+++|+|||||+||||||+++.|+++|||||+||+|+|+++||+ |+|++++|++|
T Consensus 2 ~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~q 77 (512)
T 3iyg_Q 2 GAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPA----AKMIVMASHMQ 77 (512)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHHh
Confidence 3566788 899999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhh----cccCCCHHHHHHHHHHhcCC---
Q 008181 112 NKAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSR----AQMISTPEEITQVATISANG--- 184 (575)
Q Consensus 112 d~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~----s~~v~~~~~L~~va~ts~~~--- 184 (575)
|+++||||||+|+|+++||+++.+++++|+||..|++||++|.+.++++|+++ ++++++++.|.++|+|++++
T Consensus 78 d~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~ 157 (512)
T 3iyg_Q 78 EQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQY 157 (512)
T ss_pred hhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCc
Confidence 99999999999999999999999999999999999999999999999999998 56777899999999999987
Q ss_pred --chHHHHHHHHHHHHhccc-Ce-------EEEecCCcccceEEEEeceEEeecccCCCCccCcCCCceeccCceeeecc
Q 008181 185 --EREIGELLARAMEKVGKE-GV-------ITVVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIYD 254 (575)
Q Consensus 185 --~~~la~lv~ea~~~v~~~-~~-------I~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d 254 (575)
+++|++++++|+.+++++ +. |.+..|+++.|+ ++++|++|+++|.+ |++.++||+|++++
T Consensus 158 ~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~---------~~~~~~n~kI~ll~ 227 (512)
T 3iyg_Q 158 GNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG---------DVTSVKDAKIAVYS 227 (512)
T ss_pred cchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC---------CCcccccCceEEEe
Confidence 689999999999999876 32 345679999776 99999999999864 45677899999988
Q ss_pred ccc-------------CCHHHHHHH-------H----HHHHHhCCCEEEEecCchHHHHHHHHHhhcccCceEEEEecCC
Q 008181 255 KKI-------------SDMNSLVGL-------L----ELAVEKNRALLIVAEDVERDALAMLILNKHHAGVKVCAIKAPG 310 (575)
Q Consensus 255 ~~l-------------~~~~~l~~~-------l----e~i~~~~~~lvI~~~~i~~~al~~l~~n~~~~~~~i~~vk~~~ 310 (575)
+++ ++++++.++ + +++.+.|++|||++++|++.++++|.+. +|++||+++
T Consensus 228 ~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~------~I~av~~~~ 301 (512)
T 3iyg_Q 228 CPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKY------NIMLVRLNS 301 (512)
T ss_pred cccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC------CeEEEEeCC
Confidence 864 356666554 4 4888999999999999999999998643 599999875
Q ss_pred CCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEEe---eccEEEEecCCChhhHHHHHHHHHhhhhccC
Q 008181 311 FGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTVS---VDDTIVLHGGGDKKLIEERCEEVCQTAMGKS 387 (575)
Q Consensus 311 ~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~~---~~~~~~~~g~~~~~~i~~~~~~l~~~~l~~~ 387 (575)
+.+|+|||++|||+++++ ++++++++||+|+.|++. ++++++|++|+.
T Consensus 302 -----~~dle~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~------------------- 352 (512)
T 3iyg_Q 302 -----KWDLRRLCKTVGATALPR-----LNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE------------------- 352 (512)
T ss_pred -----HHHHHHHHHHhCCEEecc-----cccCCHHHCCcccEEEEEEeCCeEEEEEEcccC-------------------
Confidence 457999999999999999 999999999999999864 458888887532
Q ss_pred cchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHHHHHhhhcc-Cc
Q 008181 388 AATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYATKALENLKTE-NE 465 (575)
Q Consensus 388 ~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~~L~~~~~~-~~ 465 (575)
.+++|||+|||+|+++++|+||++||||+++|+++++| +|||||++|++++.+|++++.+ ++
T Consensus 353 ----------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g 416 (512)
T 3iyg_Q 353 ----------------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPG 416 (512)
T ss_pred ----------------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCc
Confidence 25689999999999999999999999999999999999 9999999999999999999876 78
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC---CCceeEecCCC--cccccccCcccccHHHHHHHHHHHH
Q 008181 466 DQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD---DVNFGFDAAKG--EYVDMVKAGIIDPLKVVRTALADAA 540 (575)
Q Consensus 466 ~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~---~~~~Gid~~~g--~i~d~~~~gI~dp~~vk~~~l~~A~ 540 (575)
++|+++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+| ++.||++.|||||+.||+++|++|+
T Consensus 417 ~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 496 (512)
T 3iyg_Q 417 LEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLAT 496 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999876 56899999965 9999999999999999999999999
Q ss_pred HHHHHHhccchhhcc
Q 008181 541 SVSLLFTTTEATVLV 555 (575)
Q Consensus 541 e~a~~iL~iD~iI~~ 555 (575)
|+|++|||+|++|++
T Consensus 497 ~~a~~iL~id~ii~~ 511 (512)
T 3iyg_Q 497 NAAVTVLRVDQIIMA 511 (512)
T ss_pred HHHHHHHhHhHheec
Confidence 999999999999975
No 24
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=3.3e-96 Score=812.60 Aligned_cols=477 Identities=17% Similarity=0.260 Sum_probs=416.0
Q ss_pred cCcccccccccchhhccc-HHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhh
Q 008181 22 YGRVLCNRNYVAKDINFG-VGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVG 100 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~g 100 (575)
||-..+.+. +++...| ++++..|+.||..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+
T Consensus 8 ~~~~~~l~~--~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~---- 81 (568)
T 3p9d_H 8 NPNAGLFKQ--GYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPA---- 81 (568)
T ss_dssp CCCCSSCCS--SCCBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHH----
T ss_pred cchhhhhhc--CccccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----
Confidence 455555555 3566666 689999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhccccccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccC----CCHHHHHH
Q 008181 101 ANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMI----STPEEITQ 176 (575)
Q Consensus 101 a~ll~~~s~~qd~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v----~~~~~L~~ 176 (575)
|||++++|++||+++||||||+|+|+++||+++.+++.+|+||..|++||++|++.++++|+++++++ ++++.|.+
T Consensus 82 Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~ 161 (568)
T 3p9d_H 82 VKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLK 161 (568)
T ss_dssp HHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHH
T ss_pred HHHHHHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999876 57889999
Q ss_pred HHHHhcCC-----chHHHHHHHHHHHHhccc-----C-------e--EEEecCCcccceEEEEeceEEeecccCCCCccC
Q 008181 177 VATISANG-----EREIGELLARAMEKVGKE-----G-------V--ITVVDGNTMVNELEVVGGMKLARGYISPYFVTD 237 (575)
Q Consensus 177 va~ts~~~-----~~~la~lv~ea~~~v~~~-----~-------~--I~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~ 237 (575)
+|+|++++ +++|++|+++|+.+++++ + . |.+.+|++++|| ++++|++|+++|.
T Consensus 162 va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~------- 233 (568)
T 3p9d_H 162 MIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGMVFNREPE------- 233 (568)
T ss_dssp HHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSCCBSSCBS-------
T ss_pred HHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccEEEeeccc-------
Confidence 99999753 589999999999999763 2 2 455679999998 9999999999873
Q ss_pred cCCCceecc---Cceeeecccc-------------cCCHHHHH-----------HHHHHHHHhCCCEEEEecCchHHHHH
Q 008181 238 PKTQKCELE---NPLILIYDKK-------------ISDMNSLV-----------GLLELAVEKNRALLIVAEDVERDALA 290 (575)
Q Consensus 238 ~~~~~~~l~---~~kIll~d~~-------------l~~~~~l~-----------~~le~i~~~~~~lvI~~~~i~~~al~ 290 (575)
.|+++++ ||+|+++|++ +++++++. ++++++.+.|++|||++++|++++++
T Consensus 234 --~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~ 311 (568)
T 3p9d_H 234 --GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALH 311 (568)
T ss_dssp --SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHH
T ss_pred --CCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHH
Confidence 3678888 9999999997 44566554 47888999999999999999999999
Q ss_pred HHHHhhcccCceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEEe---eccEEEEecCC
Q 008181 291 MLILNKHHAGVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTVS---VDDTIVLHGGG 367 (575)
Q Consensus 291 ~l~~n~~~~~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~~---~~~~~~~~g~~ 367 (575)
+|.++ +|++|+++ ++.+|+|||++|||+++++ ++++++++||+|+.|++. +++++||++|+
T Consensus 312 ~L~~~------gI~av~~v-----~~~~leria~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~ 375 (568)
T 3p9d_H 312 YLNRY------GILVLKVP-----SKFELRRLCRVCGATPLPR-----LGAPTPEELGLVETVKTMEIGGDRVTVFKQEQ 375 (568)
T ss_dssp HHHHH------TCEEECCC-----CHHHHHHHHHHHSCCCCSS-----SSCCCGGGCEECSCCCCCEETTEECBCCCCCS
T ss_pred HHHHC------CeEEEecC-----CHHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEEEEecCceEEEEecCC
Confidence 99877 48999976 5678999999999999999 999999999999999754 47899999875
Q ss_pred ChhhHHHHHHHHHhhhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH--hC-ccc
Q 008181 368 DKKLIEERCEEVCQTAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVE--EG-IVP 444 (575)
Q Consensus 368 ~~~~i~~~~~~l~~~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~--~g-vvp 444 (575)
. +.+++|||+|||+|+++++|+||++||||+++|++++ ++ +||
T Consensus 376 ~----------------------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVp 421 (568)
T 3p9d_H 376 G----------------------------------EISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLP 421 (568)
T ss_dssp S----------------------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCC
T ss_pred C----------------------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEe
Confidence 2 1246789999999999999999999999999999999 65 999
Q ss_pred CccHHHHHHHHHHHhhhcc-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcCC-----------CceeEec
Q 008181 445 GGGVALLYATKALENLKTE-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQDD-----------VNFGFDA 512 (575)
Q Consensus 445 GGGa~E~~l~~~L~~~~~~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~~-----------~~~Gid~ 512 (575)
|||++||+++.+|++|+.+ ++++|+++++|++||+.||++||+|||+|+.+++.+|++.|. +++|||+
T Consensus 422 GGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~ 501 (568)
T 3p9d_H 422 GAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDI 501 (568)
T ss_dssp TTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCH
T ss_pred CCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcc
Confidence 9999999999999999877 799999999999999999999999999999999999999873 3699999
Q ss_pred CCCc---ccccccCcccccHHHHHHHHHHHHHHHHHHhccchhhccCCCCCCCCC
Q 008181 513 AKGE---YVDMVKAGIIDPLKVVRTALADAASVSLLFTTTEATVLVNSDDKNKPP 564 (575)
Q Consensus 513 ~~g~---i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~~~~~~ 564 (575)
.+|+ +.||++.|||||+.||+++|+.|+|+|++|||||++|...|...|.||
T Consensus 502 ~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~~ 556 (568)
T 3p9d_H 502 DGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAGGPRAP 556 (568)
T ss_dssp HHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC------------------
T ss_pred cCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccCCCCCC
Confidence 9997 999999999999999999999999999999999999999988877665
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=3.1e-94 Score=794.89 Aligned_cols=464 Identities=20% Similarity=0.310 Sum_probs=417.9
Q ss_pred chhhcccHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCeEEecChHHHhccccccCccchhhhHHHHHHHhccc
Q 008181 33 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGATN 112 (575)
Q Consensus 33 ~~~~~~g~~~~~~~~~~~~~l~~~v~stlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~qd 112 (575)
.++..+|.+++..|+.||..|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+ |+|++++|++||
T Consensus 9 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~qd 84 (546)
T 3p9d_F 9 KAESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPT----AVLIARAAAAQD 84 (546)
T ss_dssp TEEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHH----HHHHHHHHHHHH
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHH
Confidence 4677899999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHhhcccCC----CHHHHHHHHHHhcCC----
Q 008181 113 KAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRSGIKMAIDAVISDLKSRAQMIS----TPEEITQVATISANG---- 184 (575)
Q Consensus 113 ~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~l~~L~~~s~~v~----~~~~L~~va~ts~~~---- 184 (575)
+++||||||+|+|+++||+++.+++++|+||..|++||++|.+.++++|+++++|++ +++.|.++|+|++++
T Consensus 85 ~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~ 164 (546)
T 3p9d_F 85 EITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDA 164 (546)
T ss_dssp HHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHH
T ss_pred HHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcch
Confidence 999999999999999999999999999999999999999999999999999999884 688999999999976
Q ss_pred --chHHHHHHHHHHHHhccc-C--------eEEEecCCcccceEEEEeceEEeecccCCCCccCcCCCceeccCceeeec
Q 008181 185 --EREIGELLARAMEKVGKE-G--------VITVVDGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIY 253 (575)
Q Consensus 185 --~~~la~lv~ea~~~v~~~-~--------~I~~~~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~ 253 (575)
.+.|++++++|+..+.+. + .|.+.+|++..|+ ++++|++|+++|.||+ |+++++||+|+++
T Consensus 165 ~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~en~kIll~ 236 (546)
T 3p9d_F 165 DLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD-------MPTRVKNAYVLIL 236 (546)
T ss_dssp HHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEESCCCCSSS-------SCSSBCSCCCCEE
T ss_pred hHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEEeccccccc-------CcceecCceEEEe
Confidence 468999999999988631 1 2556689999987 9999999999999985 6889999999999
Q ss_pred ccccC-------------CHHH-----------HHHHHHHHHHh---------CCC-EEEEecCchHHHHHHHHHhhccc
Q 008181 254 DKKIS-------------DMNS-----------LVGLLELAVEK---------NRA-LLIVAEDVERDALAMLILNKHHA 299 (575)
Q Consensus 254 d~~l~-------------~~~~-----------l~~~le~i~~~---------~~~-lvI~~~~i~~~al~~l~~n~~~~ 299 (575)
|++|+ ++++ +...++.+... |.| |||++++|+++++++|..|+
T Consensus 237 ~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~g--- 313 (546)
T 3p9d_F 237 NVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHN--- 313 (546)
T ss_dssp CCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTT---
T ss_pred cCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCC---
Confidence 98764 2221 22345666543 344 67777899999999998875
Q ss_pred CceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEE---EeeccEEEEecCCChhhHHHHH
Q 008181 300 GVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVT---VSVDDTIVLHGGGDKKLIEERC 376 (575)
Q Consensus 300 ~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~---~~~~~~~~~~g~~~~~~i~~~~ 376 (575)
|+++++ +++++|+|||++|||+++++ ++++++++||+|+.|+ +++++|+||+||+++
T Consensus 314 ---I~~vr~-----v~~~~leria~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------- 373 (546)
T 3p9d_F 314 ---ILALRR-----AKRRNMERLQLVTGGEAQNS-----VEDLSPQILGFSGLVYQETIGEEKFTYVTENTDP------- 373 (546)
T ss_dssp ---CEEECC-----CCHHHHHHHHHTTTBCCCCC-----CSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCC-------
T ss_pred ---CeeEec-----CCHHHHHHHHHHhCCEEecc-----hhhCCHhHCCcccEEEEEEecCceEEEEecCCCC-------
Confidence 788874 47789999999999999999 9999999999999994 678899999998754
Q ss_pred HHHHhhhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHHHHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHH
Q 008181 377 EEVCQTAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVGERKDRVTDALNATRAAVEEG-IVPGGGVALLYATK 455 (575)
Q Consensus 377 ~~l~~~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~ 455 (575)
..|||+|||+|+++++|+||++||||+++|+++++| +|||||++|++++.
T Consensus 374 -----------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~ 424 (546)
T 3p9d_F 374 -----------------------------KSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSR 424 (546)
T ss_dssp -----------------------------SCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHH
T ss_pred -----------------------------ceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHH
Confidence 248999999999999999999999999999999999 99999999999999
Q ss_pred HHHh---hhcc-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHhcC--------CCceeEecCCCcccccccC
Q 008181 456 ALEN---LKTE-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGKLLEQD--------DVNFGFDAAKGEYVDMVKA 523 (575)
Q Consensus 456 ~L~~---~~~~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~--------~~~~Gid~~~g~i~d~~~~ 523 (575)
+|++ |+.. ++++|+++++|++||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.
T Consensus 425 ~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~ 504 (546)
T 3p9d_F 425 YLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIE 504 (546)
T ss_dssp HHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGG
T ss_pred HHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhc
Confidence 9998 5666 78999999999999999999999999999999999999764 3579999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHHHHHhccchhhccCCCCC
Q 008181 524 GIIDPLKVVRTALADAASVSLLFTTTEATVLVNSDDK 560 (575)
Q Consensus 524 gI~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~~ 560 (575)
|||||+.||+++|++|+|+|++|||||+||.+.+...
T Consensus 505 gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~~~ 541 (546)
T 3p9d_F 505 GIWDSYRVLRNAITGATGIASNLLLCDELLRAGRSTL 541 (546)
T ss_dssp TCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCSSC
T ss_pred cCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence 9999999999999999999999999999998865543
No 26
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=7.5e-92 Score=768.23 Aligned_cols=442 Identities=21% Similarity=0.362 Sum_probs=343.6
Q ss_pred EeecCCCCeEEecChHHHhccccccCccchhhhHHHHHHHhccccccCCccchHHHHHHHHHHHHHHhhhCCCChHHHHH
Q 008181 69 IIEKSIGNPKVTKDGVTVARSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRS 148 (575)
Q Consensus 69 mi~~~~g~~~iTnDG~tIlk~i~l~hP~~~~ga~ll~~~s~~qd~~~GDGTTs~vvLa~~Ll~~~~~li~~gi~p~~I~~ 148 (575)
||+++.|+++|||||+||||+|+++||+ |||++++|++||+++||||||+|+|+++||+++.+++++|+||..|++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPA----AKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHH----HHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 6888899999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCC--CHHHHHHHHHHhcC------CchHHHHHHHHHHHHhccc--C----------eEEEe
Q 008181 149 GIKMAIDAVISDLKSRAQMIS--TPEEITQVATISAN------GEREIGELLARAMEKVGKE--G----------VITVV 208 (575)
Q Consensus 149 g~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~ts~~------~~~~la~lv~ea~~~v~~~--~----------~I~~~ 208 (575)
||++|++.++++|+++++|++ +++.|.++|+|+++ ++++|++++++|+.+++++ | .|.+.
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 999999999999999999986 48899999998854 4689999999999999865 4 23445
Q ss_pred cCCcccceEEEEeceEEeecccCCCCccCcCCCceeccCceeeecccc-------------cCCHHHH-----------H
Q 008181 209 DGNTMVNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIYDKK-------------ISDMNSL-----------V 264 (575)
Q Consensus 209 ~G~~~~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d~~-------------l~~~~~l-----------~ 264 (575)
+|++++|+ ++++|++|+++|.||+| +++++||+|+++|++ +++++++ .
T Consensus 157 ~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~ 228 (500)
T 3aq1_B 157 AGGSIDDS-ELIDGLVIDKERSHPNM-------PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMR 228 (500)
T ss_dssp ESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEEEESSCBCC-------------------------CHHH
T ss_pred cCCCccce-EEEeeeEEeecCCCCCC-------cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHH
Confidence 89999887 99999999999999975 678899999999998 4455554 7
Q ss_pred HHHHHHHHhCCCEEEEecCchHHHHHHHHHhhcccCceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCc
Q 008181 265 GLLELAVEKNRALLIVAEDVERDALAMLILNKHHAGVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKE 344 (575)
Q Consensus 265 ~~le~i~~~~~~lvI~~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~ 344 (575)
++++++.+.|+||||++++|+++++++|..++ |++|+ ++++++|+|||++|||+++++ ++++++
T Consensus 229 ~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis~-----l~~~~~ 292 (500)
T 3aq1_B 229 EMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAVR-----RVKKSDLKRLSKVTGATIIQD-----LDQITT 292 (500)
T ss_dssp HHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBSC-----TTCCCS
T ss_pred HHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEEE-----eCCHHHHHHHHHHhCCeEecc-----cccCCH
Confidence 89999999999999999999999999999875 88886 568999999999999999998 999999
Q ss_pred ccCcceeEEEEe---eccEEEEecCCChhhHHHHHHHHHhhhhccCcchhhHHHHHHHHhhhcCCeEEEEEcCCchhhHH
Q 008181 345 EMLGTAKKVTVS---VDDTIVLHGGGDKKLIEERCEEVCQTAMGKSAATFDREKAQERLSKLTGGVAVFKVGGASEVEVG 421 (575)
Q Consensus 345 ~~lG~~~~v~~~---~~~~~~~~g~~~~~~i~~~~~~l~~~~l~~~~~~~~~~~l~~r~~~l~g~~~tI~irG~t~~~l~ 421 (575)
++||+|+.|++. +++|++|+||++ +++|||+|||+|+++++
T Consensus 293 ~~LG~a~~v~~~~ig~~~~~~~~g~~~------------------------------------~~~~TI~lrG~t~~~l~ 336 (500)
T 3aq1_B 293 EDVGTAGLVEEKEVRGGKMTYVTGCQN------------------------------------SKAVTVLLHGGTEHVVD 336 (500)
T ss_dssp TTCEEEEEEEEEECSSSEEEEEEEETT------------------------------------CCCEEEEEEESSHHHHH
T ss_pred hHCCCceEEEEEEecCeEEEEEECCCC------------------------------------CceEEEEecCCcHHHHH
Confidence 999999999975 789999999764 25699999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhC-cccCccHHHHHHHHHHHhhhcc-CchhHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHH
Q 008181 422 ERKDRVTDALNATRAAVEEG-IVPGGGVALLYATKALENLKTE-NEDQRRGIHIIQNALKAPTLTIASNAGFDGSTIIGK 499 (575)
Q Consensus 422 E~~r~l~dal~~~~~al~~g-vvpGGGa~E~~l~~~L~~~~~~-~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~ 499 (575)
|+||++|||++++|+++++| +|||||++|++++.+|++++.+ ++++|+++++|++||+.||++||+|||+|+.+++++
T Consensus 337 E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~ 416 (500)
T 3aq1_B 337 SLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVE 416 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 99999999999999999999 9999999999999999999876 789999999999999999999999999999999999
Q ss_pred HHhcC---CCceeEecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHhccchhhccCCCCCCCCCC-CCCCCCCCC
Q 008181 500 LLEQD---DVNFGFDAAKGEYVDMVKAGIIDPLKVVRTALADAASVSLLFTTTEATVLVNSDDKNKPPS-RVPNMDGLG 574 (575)
Q Consensus 500 l~~~~---~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~~~~~~~-~~~~~~~~~ 574 (575)
|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++||++|++|...|+++|+|+| +|+||++..
T Consensus 417 l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~g~~~~~~~~~ 495 (500)
T 3aq1_B 417 LRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASKGSANQGMGPGGLPDMPDLD 495 (500)
T ss_dssp HHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC--------------------------
T ss_pred HHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCCCC
Confidence 99875 3589999999999999999999999999999999999999999999999998887777654 444555443
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-40 Score=309.43 Aligned_cols=193 Identities=45% Similarity=0.747 Sum_probs=188.4
Q ss_pred EEEEeceEEeecccCCCCccCcCCCceeccCceeeecccccCCHHHHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHhh
Q 008181 217 LEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIYDKKISDMNSLVGLLELAVEKNRALLIVAEDVERDALAMLILNK 296 (575)
Q Consensus 217 ~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d~~l~~~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~l~~n~ 296 (575)
+++++|+.||+||+||||+++++.|..+++||+||++|.+|+++++++|++|.+.+.+.||+|++++|+.+||..|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEEeeccEEEEecCCChhhHHHHH
Q 008181 297 HHAGVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTVSVDDTIVLHGGGDKKLIEERC 376 (575)
Q Consensus 297 ~~~~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~~~~~~~~~~g~~~~~~i~~~~ 376 (575)
++|.++|+|||+|+||+.++..|+|||.+|||++++.+.|+++++++.++||+|++|.+++++++++.|.+++++|++||
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhccCcchhhHHHHHHHHhhhcCCeEEE
Q 008181 377 EEVCQTAMGKSAATFDREKAQERLSKLTGGVAVF 410 (575)
Q Consensus 377 ~~l~~~~l~~~~~~~~~~~l~~r~~~l~g~~~tI 410 (575)
+++ +.+++.+.++|+|++|+||+++|+|+++.|
T Consensus 162 ~qI-r~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHL-RAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHH-HHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHH-HHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999 999999999999999999999999998753
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=2.5e-39 Score=301.28 Aligned_cols=189 Identities=46% Similarity=0.768 Sum_probs=184.5
Q ss_pred EEeceEEeecccCCCCccCcCCCceeccCceeeecccccCCHHHHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHhhcc
Q 008181 219 VVGGMKLARGYISPYFVTDPKTQKCELENPLILIYDKKISDMNSLVGLLELAVEKNRALLIVAEDVERDALAMLILNKHH 298 (575)
Q Consensus 219 l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d~~l~~~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~l~~n~~~ 298 (575)
=.+|+.||+||+||||+++++.|..+++||+||++|.+|+++++++|++|.+.+.+.||+|++++|+.+||..|+.|+++
T Consensus 11 ~~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklr 90 (201)
T 3osx_A 11 GSEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMR 90 (201)
T ss_dssp -CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHH
T ss_pred CccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhcc
Confidence 34699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEEeeccEEEEecCCChhhHHHHHHH
Q 008181 299 AGVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTVSVDDTIVLHGGGDKKLIEERCEE 378 (575)
Q Consensus 299 ~~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~~~~~~~~~~g~~~~~~i~~~~~~ 378 (575)
|.++|+|||+|+||+.++..|+|||.+|||++++.+.++++++++.++||+|++|.+++++++++.|.+++++|++||++
T Consensus 91 g~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~q 170 (201)
T 3osx_A 91 GIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQ 170 (201)
T ss_dssp TSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhccCcchhhHHHHHHHHhhhcCCeE
Q 008181 379 VCQTAMGKSAATFDREKAQERLSKLTGGVA 408 (575)
Q Consensus 379 l~~~~l~~~~~~~~~~~l~~r~~~l~g~~~ 408 (575)
| +.+++.+.++|++++|+||+++|+|+++
T Consensus 171 I-r~qie~t~S~ydkEKLqERLAKLsGGVA 199 (201)
T 3osx_A 171 I-RQQIEESTSDYDREKLQERVAKLAGGVK 199 (201)
T ss_dssp H-HHHHHTCCCHHHHHHHHHHHHHHHHTCC
T ss_pred H-HHHHHhcCCHHHHHHHHHHHHHHcCCCc
Confidence 9 9999999999999999999999999986
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.97 E-value=1.3e-30 Score=231.48 Aligned_cols=144 Identities=46% Similarity=0.810 Sum_probs=141.5
Q ss_pred ceEEeecccCCCCccCcCCCceeccCceeeecccccCCHHHHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHhhcccCc
Q 008181 222 GMKLARGYISPYFVTDPKTQKCELENPLILIYDKKISDMNSLVGLLELAVEKNRALLIVAEDVERDALAMLILNKHHAGV 301 (575)
Q Consensus 222 Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d~~l~~~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~l~~n~~~~~~ 301 (575)
|+.||+||+||||+++++.|...++||+||++|.+|+++++++|++|++.+.|.||+|++++|+.+||..|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEEeeccEEEEec
Q 008181 302 KVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTVSVDDTIVLHG 365 (575)
Q Consensus 302 ~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~~~~~~~~~~g 365 (575)
+++|||+|+||+.|+..|+|||.+|||++++++.|+++++.+.++||+|++|.+++++++++.|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999876
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.88 E-value=3.3e-22 Score=189.16 Aligned_cols=132 Identities=19% Similarity=0.294 Sum_probs=113.0
Q ss_pred cceEEEEeceEEeecccCCCCccCcCCCceeccCceeeecccccC-------------CHH-----------HHHHHHHH
Q 008181 214 VNELEVVGGMKLARGYISPYFVTDPKTQKCELENPLILIYDKKIS-------------DMN-----------SLVGLLEL 269 (575)
Q Consensus 214 ~ds~~l~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d~~l~-------------~~~-----------~l~~~le~ 269 (575)
+|| ++++|++|++.+.++. ||+.++||||+++|++|+ +++ .+..++++
T Consensus 2 ~dS-~lv~Gvvl~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~k 73 (178)
T 1gml_A 2 EDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCED 73 (178)
T ss_dssp -CC-SEEEEEEESCCCSSTT-------SCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHH
T ss_pred CCc-EEEEEEEEeccccCCC-------CCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHH
Confidence 466 8999999999998863 788899999999999765 121 24567889
Q ss_pred HHHhCCCEEEEecCchHHHHHHHHHhhcccCceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcc
Q 008181 270 AVEKNRALLIVAEDVERDALAMLILNKHHAGVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGT 349 (575)
Q Consensus 270 i~~~~~~lvI~~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~ 349 (575)
+.+.|++||+++++|+|.++++|.+++ |+++++ +++++|+|||++|||+++++ ++++++++||+
T Consensus 74 I~~~g~nVVl~~k~I~d~a~~~l~k~g------I~~vr~-----v~~~dleria~atGa~iv~~-----~~~l~~~~LG~ 137 (178)
T 1gml_A 74 IIQLKPDVVITEKGISDLAQHYLMRAN------VTAIRR-----VRKTDNNRIARACGARIVSR-----PEELREDDVGT 137 (178)
T ss_dssp HHTTCCSEEEESSCBCHHHHHHHHHTT------CEEECC-----CCHHHHHHHHHHHCCCEESC-----GGGCCGGGSBC
T ss_pred HhhcCCcEEEECCcccHHHHHHHHHCC------CEEEec-----CCHHHHHHHHHHhCCeEeCC-----hhhCChhhhCC
Confidence 999999999999999999999998774 888874 58899999999999999999 99999999999
Q ss_pred -eeEEEE---eeccEEEEecCCCh
Q 008181 350 -AKKVTV---SVDDTIVLHGGGDK 369 (575)
Q Consensus 350 -~~~v~~---~~~~~~~~~g~~~~ 369 (575)
|+.|++ ++++++||+||+++
T Consensus 138 ~~~~v~~~~ig~~~~~~~~gc~~~ 161 (178)
T 1gml_A 138 GAGLLEIKKIGDEYFTFITDCKDP 161 (178)
T ss_dssp CEEEEEEEEETTEEEEEEEEESST
T ss_pred cccEEEEEEECCeEEEEEECCCCC
Confidence 999984 56789999998654
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.78 E-value=7.2e-19 Score=163.01 Aligned_cols=127 Identities=17% Similarity=0.330 Sum_probs=109.5
Q ss_pred EeceEEeecccCCCCccCcCCCceeccCceeeecccccC-------------CHHH-----------HHHHHHHHHHhCC
Q 008181 220 VGGMKLARGYISPYFVTDPKTQKCELENPLILIYDKKIS-------------DMNS-----------LVGLLELAVEKNR 275 (575)
Q Consensus 220 ~~Giv~~~~~~~~~~~~~~~~~~~~l~~~kIll~d~~l~-------------~~~~-----------l~~~le~i~~~~~ 275 (575)
++|++|++++.+|. ||+.++||||+++|++|+ ++++ +..+++++.+.|+
T Consensus 1 i~Gvv~~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSK-------MPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTT-------SCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCC-------CCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 47999999998864 788999999999999875 2222 4567889999999
Q ss_pred CEEEEecCchHHHHHHHHHhhcccCceEEEEecCCCCCcchhHHHHHHHHhCCeEeecCCCCcccccCcccCcceeEEEE
Q 008181 276 ALLIVAEDVERDALAMLILNKHHAGVKVCAIKAPGFGDNRRANLDDLAILTGGEIISEDRGLTLDKVKEEMLGTAKKVTV 355 (575)
Q Consensus 276 ~lvI~~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~~~~~le~la~~tGa~iis~~~~~~~~~~~~~~lG~~~~v~~ 355 (575)
+|||++++|+|.++++|.+++ |++++ ++++++|+|||++|||+++++ +++++++.||+|+.|+.
T Consensus 74 nVVl~~k~I~d~a~~~l~k~g------I~~v~-----~v~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKEG------IYAVR-----RVKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHTCCCBSS-----TTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHCC------CEEEc-----cCCHHHHHHHHHHhCCeeeCc-----cccCCcccCccceEEEE
Confidence 999999999999999998774 88887 458899999999999999999 99999999999999985
Q ss_pred ---eeccEEEEecCCCh
Q 008181 356 ---SVDDTIVLHGGGDK 369 (575)
Q Consensus 356 ---~~~~~~~~~g~~~~ 369 (575)
+++++++|+||++-
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 56899999998764
No 32
>2bn8_A CEDA, cell division activator CEDA; cell division activator protein, cell cycle protein; NMR {Escherichia coli} PDB: 2d35_A
Probab=27.70 E-value=28 Score=26.70 Aligned_cols=24 Identities=17% Similarity=0.302 Sum_probs=18.5
Q ss_pred hhhccCCCCCCCCCCCCCCCCCCC
Q 008181 551 ATVLVNSDDKNKPPSRVPNMDGLG 574 (575)
Q Consensus 551 ~iI~~~~~~~~~~~~~~~~~~~~~ 574 (575)
.+|+..|+.+|+||-|---|||-|
T Consensus 18 pvisyvprvepapp~ha~kmd~fr 41 (87)
T 2bn8_A 18 QIISYVPRTEPAPPEHAIKMDSFR 41 (87)
T ss_dssp ---CCCCCCCCBTTBSCBCTTTCT
T ss_pred cceeeccCCCCCCchHhhhcccch
Confidence 577888999999999888888865
Done!