Query 008182
Match_columns 575
No_of_seqs 177 out of 2586
Neff 8.8
Searched_HMMs 46136
Date Thu Mar 28 20:31:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008182.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008182hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 5.6E-48 1.2E-52 417.4 38.8 546 7-556 16-568 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 5.8E-42 1.2E-46 352.8 34.6 466 15-553 11-492 (498)
3 PRK10207 dipeptide/tripeptide 100.0 3.1E-37 6.8E-42 333.5 40.5 462 21-554 10-482 (489)
4 PRK15462 dipeptide/tripeptide 100.0 7.7E-37 1.7E-41 326.1 39.9 416 22-504 6-437 (493)
5 TIGR00924 yjdL_sub1_fam amino 100.0 1.4E-36 3E-41 328.2 39.4 454 19-552 4-472 (475)
6 PRK09584 tppB putative tripept 100.0 7.6E-35 1.7E-39 316.4 39.9 461 17-553 13-484 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 100.0 2.5E-26 5.5E-31 253.4 29.2 339 39-431 1-346 (654)
8 PRK05122 major facilitator sup 99.9 4.7E-24 1E-28 225.8 35.5 376 22-547 12-388 (399)
9 PRK03545 putative arabinose tr 99.9 2.5E-24 5.4E-29 227.3 31.9 374 23-548 7-380 (390)
10 PRK10054 putative transporter; 99.9 1.7E-24 3.6E-29 229.1 28.9 357 22-508 4-360 (395)
11 PRK12382 putative transporter; 99.9 2.3E-23 4.9E-28 220.1 34.7 376 23-547 13-388 (392)
12 PRK11646 multidrug resistance 99.9 9.1E-24 2E-28 223.8 30.5 348 28-508 13-360 (400)
13 COG2814 AraJ Arabinose efflux 99.9 6E-23 1.3E-27 210.3 33.6 380 21-550 9-388 (394)
14 PRK11551 putative 3-hydroxyphe 99.9 3.5E-23 7.7E-28 219.5 33.2 358 22-506 12-369 (406)
15 PRK10504 putative transporter; 99.9 4.2E-23 9.2E-28 223.5 33.7 401 24-509 9-417 (471)
16 PRK10489 enterobactin exporter 99.9 1.5E-23 3.3E-28 223.3 28.8 392 25-558 17-409 (417)
17 TIGR00900 2A0121 H+ Antiporter 99.9 3E-23 6.6E-28 215.6 29.4 358 29-506 3-362 (365)
18 PRK14995 methyl viologen resis 99.9 3.2E-23 7E-28 225.7 29.6 396 24-507 5-413 (495)
19 PRK10213 nepI ribonucleoside t 99.9 1.7E-22 3.7E-27 213.6 33.6 179 17-227 12-190 (394)
20 PRK09874 drug efflux system pr 99.9 5.9E-23 1.3E-27 217.7 30.0 382 24-549 13-399 (408)
21 PRK11663 regulatory protein Uh 99.9 1.2E-22 2.6E-27 217.7 31.6 169 26-226 24-192 (434)
22 PRK15402 multidrug efflux syst 99.9 2.8E-22 6E-27 212.8 33.7 359 23-506 8-369 (406)
23 TIGR01299 synapt_SV2 synaptic 99.9 3.6E-22 7.9E-27 223.1 36.0 156 45-231 186-354 (742)
24 PF07690 MFS_1: Major Facilita 99.9 5.1E-23 1.1E-27 212.9 25.9 350 31-498 2-352 (352)
25 TIGR00893 2A0114 d-galactonate 99.9 2E-22 4.3E-27 211.1 30.3 157 46-233 14-170 (399)
26 PRK10077 xylE D-xylose transpo 99.9 2E-22 4.4E-27 218.5 31.3 156 56-230 50-213 (479)
27 PRK09556 uhpT sugar phosphate 99.9 9.3E-23 2E-27 220.6 28.2 181 25-231 25-211 (467)
28 TIGR00879 SP MFS transporter, 99.9 2.6E-22 5.7E-27 216.0 31.1 146 58-231 68-216 (481)
29 PRK12307 putative sialic acid 99.9 1.2E-22 2.5E-27 216.9 27.6 166 23-220 16-181 (426)
30 PRK10406 alpha-ketoglutarate t 99.9 1.1E-21 2.3E-26 210.2 34.8 175 26-224 23-211 (432)
31 TIGR02332 HpaX 4-hydroxyphenyl 99.9 3.8E-22 8.3E-27 212.2 31.0 180 22-233 5-190 (412)
32 TIGR00891 2A0112 putative sial 99.9 3.5E-22 7.5E-27 211.0 30.4 176 19-226 6-183 (405)
33 PRK09705 cynX putative cyanate 99.9 5.9E-22 1.3E-26 209.5 31.8 365 35-552 19-385 (393)
34 COG2271 UhpC Sugar phosphate p 99.9 8.9E-23 1.9E-27 206.3 23.7 408 21-550 21-436 (448)
35 TIGR00899 2A0120 sugar efflux 99.9 7.9E-22 1.7E-26 206.4 31.5 172 31-233 3-177 (375)
36 TIGR00903 2A0129 major facilit 99.9 7.8E-22 1.7E-26 206.3 31.1 156 46-233 11-166 (368)
37 TIGR00892 2A0113 monocarboxyla 99.9 2E-22 4.3E-27 217.1 27.2 352 49-506 42-394 (455)
38 TIGR00711 efflux_EmrB drug res 99.9 1.4E-22 2.9E-27 220.0 25.8 398 26-506 3-409 (485)
39 PRK09952 shikimate transporter 99.9 1.9E-21 4.2E-26 208.5 33.7 180 20-223 17-211 (438)
40 TIGR00890 2A0111 Oxalate/Forma 99.9 2.8E-22 6E-27 209.1 25.9 354 24-506 3-356 (377)
41 PF00854 PTR2: POT family; In 99.9 5.2E-24 1.1E-28 223.4 12.4 365 92-491 1-370 (372)
42 TIGR00710 efflux_Bcr_CflA drug 99.9 2.5E-21 5.4E-26 203.3 32.7 178 23-232 3-180 (385)
43 PRK10091 MFS transport protein 99.9 1.7E-21 3.6E-26 205.3 31.1 175 24-230 2-176 (382)
44 PLN00028 nitrate transmembrane 99.9 2.4E-21 5.1E-26 210.0 33.0 175 24-231 35-218 (476)
45 PRK03699 putative transporter; 99.9 4.3E-21 9.2E-26 203.0 34.0 175 22-228 4-179 (394)
46 TIGR00895 2A0115 benzoate tran 99.9 1.5E-21 3.4E-26 205.2 30.3 176 23-230 15-190 (398)
47 cd06174 MFS The Major Facilita 99.9 2.1E-21 4.6E-26 200.1 30.6 348 28-545 2-349 (352)
48 PRK11195 lysophospholipid tran 99.9 4.2E-21 9.1E-26 203.0 32.8 167 25-227 3-169 (393)
49 PRK10642 proline/glycine betai 99.9 6.3E-21 1.4E-25 207.5 34.6 176 24-223 15-204 (490)
50 TIGR00894 2A0114euk Na(+)-depe 99.9 4.7E-21 1E-25 207.2 32.4 150 55-233 70-220 (465)
51 PRK11652 emrD multidrug resist 99.9 7.3E-21 1.6E-25 201.1 32.8 174 22-227 5-178 (394)
52 TIGR00897 2A0118 polyol permea 99.9 8.6E-21 1.9E-25 201.2 33.1 172 21-220 9-181 (402)
53 PRK11273 glpT sn-glycerol-3-ph 99.9 2.9E-21 6.4E-26 208.0 29.7 174 28-229 28-205 (452)
54 PRK15011 sugar efflux transpor 99.9 1.4E-20 3.1E-25 198.9 33.5 180 21-233 11-195 (393)
55 PRK09528 lacY galactoside perm 99.9 6.5E-21 1.4E-25 203.3 30.9 393 24-548 9-403 (420)
56 PRK03633 putative MFS family t 99.9 9.9E-21 2.2E-25 199.3 31.1 159 23-213 4-162 (381)
57 TIGR00887 2A0109 phosphate:H+ 99.9 2.7E-20 5.8E-25 203.2 35.2 182 25-231 16-224 (502)
58 PRK03893 putative sialic acid 99.9 5E-21 1.1E-25 208.6 28.7 169 21-221 16-184 (496)
59 PRK15403 multidrug efflux syst 99.9 3.7E-20 8.1E-25 197.0 34.5 148 52-230 42-189 (413)
60 PRK15075 citrate-proton sympor 99.9 4.3E-20 9.4E-25 197.9 34.2 173 23-219 13-199 (434)
61 TIGR00898 2A0119 cation transp 99.9 8E-21 1.7E-25 207.5 29.1 148 50-231 113-263 (505)
62 PRK11043 putative transporter; 99.9 3.6E-20 7.9E-25 196.2 32.6 162 39-231 17-180 (401)
63 TIGR00902 2A0127 phenyl propri 99.9 7.9E-20 1.7E-24 192.5 33.3 365 27-542 6-373 (382)
64 TIGR00881 2A0104 phosphoglycer 99.9 6.7E-21 1.5E-25 198.8 24.7 155 46-231 15-170 (379)
65 KOG2532 Permease of the major 99.9 1.5E-20 3.2E-25 200.3 27.4 378 55-549 67-448 (466)
66 TIGR00712 glpT glycerol-3-phos 99.9 1.2E-20 2.6E-25 202.4 26.4 159 47-233 48-207 (438)
67 KOG1330 Sugar transporter/spin 99.9 1.4E-21 3.1E-26 199.3 17.4 180 22-233 30-210 (493)
68 TIGR00882 2A0105 oligosacchari 99.9 8.3E-20 1.8E-24 193.2 31.8 390 25-545 2-392 (396)
69 PRK11102 bicyclomycin/multidru 99.9 1.4E-19 3.1E-24 189.7 32.7 157 43-231 9-165 (377)
70 PRK10473 multidrug efflux syst 99.9 2E-19 4.3E-24 190.0 33.4 173 26-230 4-176 (392)
71 TIGR00889 2A0110 nucleoside tr 99.9 2.3E-19 5.1E-24 191.1 33.0 387 29-551 6-405 (418)
72 COG2223 NarK Nitrate/nitrite t 99.9 1.1E-19 2.5E-24 184.2 27.9 393 20-551 9-404 (417)
73 PRK10133 L-fucose transporter; 99.9 4.3E-19 9.3E-24 190.1 34.1 154 23-205 24-177 (438)
74 PRK15034 nitrate/nitrite trans 99.9 1.4E-19 3.1E-24 191.7 29.5 179 25-231 34-231 (462)
75 PF05977 MFS_3: Transmembrane 99.9 6E-19 1.3E-23 191.1 33.6 360 25-508 10-370 (524)
76 PRK08633 2-acyl-glycerophospho 99.9 5.4E-19 1.2E-23 211.7 35.0 156 24-207 8-165 (1146)
77 PRK11128 putative 3-phenylprop 99.9 7.4E-19 1.6E-23 185.1 31.6 337 34-507 13-355 (382)
78 TIGR00886 2A0108 nitrite extru 99.9 7.7E-20 1.7E-24 190.8 23.1 167 26-223 2-179 (366)
79 PRK06814 acylglycerophosphoeth 99.8 5.4E-19 1.2E-23 211.5 33.3 337 61-505 52-394 (1140)
80 PRK11010 ampG muropeptide tran 99.8 2.5E-18 5.4E-23 186.9 34.2 178 23-230 10-193 (491)
81 TIGR00792 gph sugar (Glycoside 99.8 7.6E-19 1.6E-23 188.1 29.5 357 34-510 8-383 (437)
82 TIGR00883 2A0106 metabolite-pr 99.8 1.9E-18 4E-23 181.4 27.6 158 47-227 14-186 (394)
83 TIGR00896 CynX cyanate transpo 99.8 8.9E-19 1.9E-23 182.5 24.4 333 41-509 15-350 (355)
84 KOG0569 Permease of the major 99.8 1.1E-17 2.5E-22 176.5 29.4 397 63-560 62-466 (485)
85 TIGR00885 fucP L-fucose:H+ sym 99.8 2.7E-17 6E-22 174.7 32.7 173 26-227 4-202 (410)
86 PRK11902 ampG muropeptide tran 99.8 5.6E-17 1.2E-21 172.0 34.5 169 30-228 4-178 (402)
87 KOG0254 Predicted transporter 99.8 8.7E-17 1.9E-21 175.9 33.1 400 62-558 90-493 (513)
88 TIGR00901 2A0125 AmpG-related 99.8 1.7E-17 3.7E-22 172.8 25.9 160 45-233 7-179 (356)
89 TIGR01301 GPH_sucrose GPH fami 99.8 2.6E-16 5.6E-21 168.0 33.8 438 26-550 5-473 (477)
90 PF03825 Nuc_H_symport: Nucleo 99.8 6.2E-16 1.3E-20 162.8 33.5 387 29-550 6-397 (400)
91 TIGR00806 rfc RFC reduced fola 99.8 1.9E-16 4.1E-21 165.1 25.6 157 43-232 43-203 (511)
92 PRK10429 melibiose:sodium symp 99.8 2.9E-16 6.3E-21 170.2 27.2 368 30-511 11-397 (473)
93 TIGR00788 fbt folate/biopterin 99.8 7.6E-16 1.6E-20 166.3 30.0 380 26-509 27-415 (468)
94 KOG2615 Permease of the major 99.7 3E-16 6.4E-21 156.4 23.4 122 53-206 60-181 (451)
95 TIGR02718 sider_RhtX_FptX side 99.7 2.6E-15 5.6E-20 158.6 31.1 179 27-233 3-185 (390)
96 PRK09669 putative symporter Ya 99.7 1.2E-15 2.5E-20 164.1 28.1 184 24-230 8-202 (444)
97 PRK09848 glucuronide transport 99.7 1.9E-15 4.1E-20 162.7 29.7 158 25-204 8-174 (448)
98 KOG0255 Synaptic vesicle trans 99.7 2.3E-15 4.9E-20 165.3 29.8 142 54-229 111-252 (521)
99 PF01306 LacY_symp: LacY proto 99.7 9.9E-16 2.1E-20 158.9 24.9 391 24-549 6-401 (412)
100 PF13347 MFS_2: MFS/sugar tran 99.7 1.2E-15 2.6E-20 163.3 25.9 359 34-511 10-388 (428)
101 TIGR00805 oat sodium-independe 99.7 4.6E-15 9.9E-20 165.4 30.0 205 22-233 29-282 (633)
102 COG0738 FucP Fucose permease [ 99.7 1.2E-14 2.7E-19 146.8 29.7 149 30-206 17-165 (422)
103 PF06609 TRI12: Fungal trichot 99.7 8.5E-15 1.8E-19 158.7 30.5 386 46-505 64-465 (599)
104 KOG3764 Vesicular amine transp 99.7 2.6E-16 5.7E-21 157.7 17.0 149 54-232 99-247 (464)
105 PTZ00207 hypothetical protein; 99.7 3.4E-14 7.4E-19 154.9 32.3 173 24-227 27-200 (591)
106 KOG0252 Inorganic phosphate tr 99.7 3E-15 6.5E-20 152.7 20.6 398 58-559 81-508 (538)
107 PF00083 Sugar_tr: Sugar (and 99.7 3.7E-20 8.1E-25 199.2 -17.0 142 61-230 46-190 (451)
108 COG2807 CynX Cyanate permease 99.6 9E-14 1.9E-18 138.6 26.7 353 46-549 32-386 (395)
109 KOG2533 Permease of the major 99.6 1.8E-13 3.9E-18 146.6 30.2 153 52-235 72-230 (495)
110 PRK11462 putative transporter; 99.6 9E-14 2E-18 150.0 28.0 179 29-230 13-202 (460)
111 KOG2504 Monocarboxylate transp 99.6 3.8E-14 8.2E-19 153.1 23.4 421 26-548 43-476 (509)
112 COG2211 MelB Na+/melibiose sym 99.5 3.8E-12 8.2E-17 133.6 27.6 371 23-511 10-400 (467)
113 PF11700 ATG22: Vacuole efflux 99.5 2.7E-11 5.7E-16 130.3 34.7 88 446-548 381-468 (477)
114 KOG0253 Synaptic vesicle trans 99.5 7.3E-12 1.6E-16 124.5 26.6 160 39-231 91-250 (528)
115 KOG4686 Predicted sugar transp 99.5 4.6E-14 9.9E-19 135.1 9.2 375 46-549 64-444 (459)
116 PRK10642 proline/glycine betai 99.5 1.6E-12 3.6E-17 141.5 17.4 180 23-231 248-429 (490)
117 PRK09556 uhpT sugar phosphate 99.4 1.1E-12 2.4E-17 142.0 15.7 178 25-231 258-448 (467)
118 KOG2325 Predicted transporter/ 99.4 2E-12 4.2E-17 136.1 16.3 194 15-235 24-232 (488)
119 PF03209 PUCC: PUCC protein; 99.4 3.3E-10 7.1E-15 116.1 32.0 346 53-509 7-365 (403)
120 PRK15011 sugar efflux transpor 99.4 5.2E-12 1.1E-16 133.6 18.6 178 22-231 213-390 (393)
121 PRK05122 major facilitator sup 99.4 6.9E-12 1.5E-16 132.7 16.1 175 28-236 219-393 (399)
122 COG2271 UhpC Sugar phosphate p 99.4 3.9E-12 8.5E-17 129.5 13.3 180 25-232 252-434 (448)
123 TIGR00890 2A0111 Oxalate/Forma 99.4 4E-12 8.7E-17 132.4 13.9 171 25-225 205-375 (377)
124 PRK09952 shikimate transporter 99.4 9.9E-12 2.1E-16 133.4 16.7 182 23-231 248-432 (438)
125 PRK03699 putative transporter; 99.4 1.1E-11 2.3E-16 131.3 16.0 174 25-230 205-378 (394)
126 cd06174 MFS The Major Facilita 99.4 1.5E-11 3.2E-16 126.6 16.6 174 25-229 175-349 (352)
127 TIGR00889 2A0110 nucleoside tr 99.4 7.8E-12 1.7E-16 133.3 15.0 180 26-233 209-403 (418)
128 TIGR00899 2A0120 sugar efflux 99.4 2E-11 4.3E-16 127.7 17.1 173 26-230 200-372 (375)
129 COG2270 Permeases of the major 99.3 4E-10 8.6E-15 115.2 25.5 346 44-510 34-406 (438)
130 PRK09705 cynX putative cyanate 99.3 3.9E-11 8.3E-16 127.0 18.8 178 25-235 205-384 (393)
131 TIGR00883 2A0106 metabolite-pr 99.3 9.1E-12 2E-16 130.5 13.8 168 25-221 219-390 (394)
132 TIGR01299 synapt_SV2 synaptic 99.3 1.5E-11 3.2E-16 138.3 15.6 135 65-231 599-733 (742)
133 PRK03545 putative arabinose tr 99.3 6.2E-11 1.3E-15 125.1 18.8 175 26-233 206-381 (390)
134 KOG2563 Permease of the major 99.3 5.7E-10 1.2E-14 114.6 23.8 138 47-208 66-203 (480)
135 PRK09874 drug efflux system pr 99.3 5.2E-11 1.1E-15 126.2 17.0 167 34-231 228-397 (408)
136 PRK11551 putative 3-hydroxyphe 99.3 5.3E-11 1.2E-15 126.2 16.9 171 28-230 223-394 (406)
137 TIGR00897 2A0118 polyol permea 99.3 8.7E-11 1.9E-15 124.6 17.8 177 25-230 222-399 (402)
138 PRK12382 putative transporter; 99.3 3.6E-11 7.8E-16 127.0 14.8 164 34-231 225-388 (392)
139 PRK09528 lacY galactoside perm 99.3 2E-11 4.4E-16 130.2 12.8 173 27-230 225-401 (420)
140 TIGR00893 2A0114 d-galactonate 99.3 6E-11 1.3E-15 124.1 16.2 177 25-229 215-396 (399)
141 PRK03893 putative sialic acid 99.3 6.2E-11 1.4E-15 129.2 16.8 150 43-221 293-442 (496)
142 PRK03633 putative MFS family t 99.3 9.6E-11 2.1E-15 123.3 17.5 163 34-231 209-371 (381)
143 TIGR00880 2_A_01_02 Multidrug 99.3 1.1E-11 2.4E-16 109.6 8.8 134 67-231 4-137 (141)
144 PRK10489 enterobactin exporter 99.3 5.1E-11 1.1E-15 127.0 15.5 175 27-233 226-400 (417)
145 PRK11273 glpT sn-glycerol-3-ph 99.3 4.4E-11 9.6E-16 128.9 14.8 177 25-230 253-433 (452)
146 TIGR00902 2A0127 phenyl propri 99.3 1.1E-10 2.4E-15 122.9 17.4 170 25-228 205-375 (382)
147 COG2223 NarK Nitrate/nitrite t 99.3 6.1E-11 1.3E-15 121.0 14.3 186 24-234 217-403 (417)
148 PRK11663 regulatory protein Uh 99.3 8.1E-11 1.8E-15 126.2 15.9 180 26-233 244-425 (434)
149 TIGR01272 gluP glucose/galacto 99.2 7.9E-10 1.7E-14 113.0 21.0 86 137-228 8-109 (310)
150 KOG2816 Predicted transporter 99.2 4E-09 8.6E-14 112.5 26.5 350 33-509 26-394 (463)
151 PRK11010 ampG muropeptide tran 99.2 2.5E-10 5.5E-15 124.3 17.7 180 27-233 224-404 (491)
152 TIGR00891 2A0112 putative sial 99.2 1.2E-10 2.6E-15 122.8 14.1 157 30-216 243-400 (405)
153 PRK15075 citrate-proton sympor 99.2 2.5E-10 5.4E-15 122.5 16.2 153 31-211 244-398 (434)
154 PRK10406 alpha-ketoglutarate t 99.2 3.9E-10 8.6E-15 120.8 17.4 169 35-231 253-423 (432)
155 TIGR00892 2A0113 monocarboxyla 99.2 2.1E-10 4.6E-15 123.8 15.1 172 25-227 241-416 (455)
156 TIGR00879 SP MFS transporter, 99.2 3.2E-10 7E-15 121.9 16.6 166 47-233 305-471 (481)
157 TIGR00712 glpT glycerol-3-phos 99.2 2.4E-10 5.1E-15 122.8 14.9 179 25-232 251-433 (438)
158 COG2814 AraJ Arabinose efflux 99.2 1.1E-09 2.5E-14 112.9 17.9 178 25-234 211-388 (394)
159 KOG4686 Predicted sugar transp 99.2 5.3E-10 1.2E-14 107.6 13.5 172 15-219 254-429 (459)
160 PF03137 OATP: Organic Anion T 99.2 4.8E-12 1E-16 137.9 -0.5 197 30-238 8-256 (539)
161 PF11700 ATG22: Vacuole efflux 99.1 1.1E-09 2.3E-14 118.0 17.3 183 25-232 281-468 (477)
162 PRK10504 putative transporter; 99.1 7.1E-10 1.5E-14 120.1 15.9 158 25-210 261-418 (471)
163 KOG3626 Organic anion transpor 99.1 1.3E-08 2.8E-13 111.7 25.1 203 24-237 95-348 (735)
164 PRK15402 multidrug efflux syst 99.1 2.4E-09 5.2E-14 113.7 19.2 172 26-224 216-387 (406)
165 TIGR02332 HpaX 4-hydroxyphenyl 99.1 7.1E-10 1.5E-14 118.1 14.6 166 25-221 242-410 (412)
166 PF03092 BT1: BT1 family; Int 99.1 2E-08 4.3E-13 107.4 25.3 163 46-233 10-176 (433)
167 TIGR02718 sider_RhtX_FptX side 99.1 2.1E-09 4.5E-14 113.5 16.8 176 26-227 209-386 (390)
168 PRK12307 putative sialic acid 99.1 2.2E-09 4.8E-14 114.6 16.7 148 40-217 246-393 (426)
169 PLN00028 nitrate transmembrane 99.1 2.1E-09 4.5E-14 116.7 16.6 174 26-232 253-433 (476)
170 PRK11128 putative 3-phenylprop 99.1 2.6E-09 5.7E-14 112.5 16.9 169 25-227 205-374 (382)
171 TIGR01272 gluP glucose/galacto 99.1 2.3E-09 5E-14 109.5 15.2 161 26-220 141-303 (310)
172 PRK10091 MFS transport protein 99.1 4.3E-09 9.4E-14 110.8 16.9 172 27-230 201-374 (382)
173 PRK15034 nitrate/nitrite trans 99.0 5.3E-09 1.2E-13 111.4 17.2 187 25-232 252-454 (462)
174 TIGR00900 2A0121 H+ Antiporter 99.0 1.9E-09 4E-14 111.8 13.3 155 25-209 210-365 (365)
175 TIGR00894 2A0114euk Na(+)-depe 99.0 4.9E-09 1.1E-13 113.4 17.0 178 25-231 261-449 (465)
176 TIGR00792 gph sugar (Glycoside 99.0 1.9E-09 4.1E-14 115.4 13.3 162 25-211 222-384 (437)
177 TIGR00882 2A0105 oligosacchari 99.0 4.5E-09 9.8E-14 111.2 15.7 171 26-227 216-390 (396)
178 TIGR00881 2A0104 phosphoglycer 99.0 1.6E-09 3.5E-14 112.8 12.0 162 25-214 216-379 (379)
179 PF05631 DUF791: Protein of un 99.0 1.7E-07 3.8E-12 94.8 25.2 155 50-232 58-216 (354)
180 PRK10054 putative transporter; 99.0 4.7E-09 1E-13 111.1 14.5 174 25-229 206-381 (395)
181 PRK11902 ampG muropeptide tran 99.0 1.3E-08 2.8E-13 108.0 17.6 173 27-230 211-388 (402)
182 TIGR00896 CynX cyanate transpo 99.0 8E-09 1.7E-13 107.5 15.4 156 25-211 197-353 (355)
183 TIGR00710 efflux_Bcr_CflA drug 99.0 1.7E-08 3.7E-13 105.8 18.0 163 26-216 207-370 (385)
184 TIGR00887 2A0109 phosphate:H+ 99.0 6.1E-09 1.3E-13 113.9 14.9 169 32-228 295-485 (502)
185 PRK10077 xylE D-xylose transpo 99.0 2E-08 4.4E-13 108.9 18.4 157 50-233 295-458 (479)
186 TIGR00711 efflux_EmrB drug res 99.0 3.7E-09 8.1E-14 114.7 12.6 156 25-207 255-410 (485)
187 COG2270 Permeases of the major 99.0 5.5E-09 1.2E-13 106.9 12.6 176 26-232 253-429 (438)
188 PF05977 MFS_3: Transmembrane 99.0 1.1E-08 2.3E-13 111.5 15.6 173 27-230 220-392 (524)
189 PRK14995 methyl viologen resis 99.0 7E-09 1.5E-13 113.2 14.0 154 25-206 259-412 (495)
190 TIGR00895 2A0115 benzoate tran 99.0 6.5E-09 1.4E-13 109.1 13.3 147 26-204 251-397 (398)
191 PRK10213 nepI ribonucleoside t 98.9 4E-08 8.8E-13 104.0 18.3 166 26-223 217-382 (394)
192 PRK10133 L-fucose transporter; 98.9 2.3E-08 4.9E-13 107.4 16.3 167 27-227 260-428 (438)
193 PRK11646 multidrug resistance 98.9 1.9E-08 4E-13 106.8 15.5 154 44-228 227-384 (400)
194 PRK08633 2-acyl-glycerophospho 98.9 2.2E-08 4.7E-13 120.6 16.6 165 25-220 232-398 (1146)
195 PRK06814 acylglycerophosphoeth 98.9 2.2E-08 4.7E-13 120.5 15.3 183 25-220 225-410 (1140)
196 TIGR00903 2A0129 major facilit 98.9 6.9E-08 1.5E-12 101.2 17.2 167 25-229 192-362 (368)
197 PF13347 MFS_2: MFS/sugar tran 98.9 5.3E-08 1.1E-12 104.2 16.6 163 25-211 225-388 (428)
198 COG2807 CynX Cyanate permease 98.8 1.3E-07 2.9E-12 95.0 17.2 173 25-228 208-381 (395)
199 KOG2504 Monocarboxylate transp 98.8 2E-08 4.3E-13 108.9 12.2 176 25-232 298-476 (509)
200 PRK11195 lysophospholipid tran 98.8 1.2E-07 2.7E-12 100.3 17.8 161 38-230 218-378 (393)
201 KOG3762 Predicted transporter 98.8 5.6E-07 1.2E-11 94.6 21.5 138 367-549 410-548 (618)
202 PRK09848 glucuronide transport 98.8 3.3E-08 7.1E-13 106.5 12.7 163 25-210 228-391 (448)
203 TIGR00901 2A0125 AmpG-related 98.8 4.3E-08 9.2E-13 102.0 13.0 145 26-191 210-355 (356)
204 KOG3098 Uncharacterized conser 98.8 2.6E-06 5.6E-11 90.0 25.8 103 67-201 56-158 (461)
205 PF07690 MFS_1: Major Facilita 98.8 1.5E-08 3.3E-13 104.5 9.1 144 27-198 208-352 (352)
206 PRK11043 putative transporter; 98.8 3.4E-07 7.3E-12 97.0 18.9 159 27-213 205-363 (401)
207 TIGR00898 2A0119 cation transp 98.8 6.4E-08 1.4E-12 105.8 13.2 143 55-231 352-494 (505)
208 PRK11102 bicyclomycin/multidru 98.7 5E-07 1.1E-11 94.6 18.1 150 26-203 195-345 (377)
209 PRK10473 multidrug efflux syst 98.7 4.6E-07 9.9E-12 95.6 17.8 85 27-112 205-289 (392)
210 KOG0253 Synaptic vesicle trans 98.7 3.6E-07 7.7E-12 91.6 14.4 173 26-231 327-518 (528)
211 KOG2532 Permease of the major 98.7 1.3E-07 2.7E-12 101.5 11.8 178 25-231 258-446 (466)
212 KOG0569 Permease of the major 98.6 1.1E-06 2.3E-11 93.7 17.3 189 24-235 268-457 (485)
213 PRK10429 melibiose:sodium symp 98.6 3.5E-07 7.6E-12 99.3 14.0 165 25-210 231-396 (473)
214 PRK09669 putative symporter Ya 98.6 3.3E-07 7.2E-12 98.6 13.5 162 25-210 229-391 (444)
215 PF03825 Nuc_H_symport: Nucleo 98.6 1.1E-06 2.4E-11 92.8 15.8 180 26-231 208-394 (400)
216 TIGR00885 fucP L-fucose:H+ sym 98.6 7.7E-07 1.7E-11 94.7 14.6 162 27-222 234-402 (410)
217 TIGR00886 2A0108 nitrite extru 98.6 3.1E-07 6.8E-12 95.6 11.4 141 26-194 226-366 (366)
218 PF01306 LacY_symp: LacY proto 98.5 1.7E-06 3.7E-11 90.4 14.0 179 24-233 219-401 (412)
219 PRK11652 emrD multidrug resist 98.5 4.8E-06 1E-10 88.0 17.6 142 41-211 223-364 (394)
220 KOG4332 Predicted sugar transp 98.4 1.9E-06 4.2E-11 82.7 11.4 154 47-227 58-215 (454)
221 PF03209 PUCC: PUCC protein; 98.4 7.7E-06 1.7E-10 84.3 15.9 173 30-229 213-395 (403)
222 KOG1330 Sugar transporter/spin 98.4 2.7E-07 5.8E-12 95.5 5.3 143 365-551 70-212 (493)
223 TIGR00924 yjdL_sub1_fam amino 98.4 4E-06 8.8E-11 91.0 14.0 186 27-233 274-469 (475)
224 PRK15403 multidrug efflux syst 98.4 9.3E-06 2E-10 86.5 16.3 174 25-227 218-392 (413)
225 COG2211 MelB Na+/melibiose sym 98.4 4.1E-06 8.8E-11 88.6 13.2 162 25-209 236-398 (467)
226 PF06813 Nodulin-like: Nodulin 98.4 1.3E-05 2.7E-10 78.6 15.3 155 24-206 2-156 (250)
227 TIGR00880 2_A_01_02 Multidrug 98.3 1.1E-05 2.3E-10 70.8 13.3 133 370-547 5-137 (141)
228 PF06963 FPN1: Ferroportin1 (F 98.3 0.0025 5.3E-08 67.7 31.1 190 25-227 2-195 (432)
229 PRK11462 putative transporter; 98.2 3.3E-05 7E-10 83.6 16.7 162 25-210 228-390 (460)
230 COG0477 ProP Permeases of the 98.2 2.5E-05 5.3E-10 77.6 14.6 148 44-221 21-174 (338)
231 PF01770 Folate_carrier: Reduc 98.2 0.00035 7.6E-09 72.9 22.9 156 45-232 23-182 (412)
232 COG0738 FucP Fucose permease [ 98.2 3.4E-05 7.4E-10 79.0 15.0 139 43-215 254-392 (422)
233 TIGR00805 oat sodium-independe 98.2 2.3E-05 5E-10 88.0 14.6 133 365-508 70-235 (633)
234 TIGR01301 GPH_sucrose GPH fami 98.1 3.1E-05 6.7E-10 83.3 14.1 208 19-235 252-474 (477)
235 PF02487 CLN3: CLN3 protein; 98.1 0.0017 3.6E-08 67.9 26.0 61 444-504 334-394 (402)
236 KOG3764 Vesicular amine transp 98.1 1E-05 2.2E-10 82.4 8.6 142 365-551 108-250 (464)
237 KOG2533 Permease of the major 98.1 1.8E-05 3.9E-10 85.4 11.0 164 26-218 274-442 (495)
238 PRK09584 tppB putative tripept 98.1 5.5E-05 1.2E-09 82.7 14.6 178 34-233 281-480 (500)
239 PF12832 MFS_1_like: MFS_1 lik 98.0 3.4E-05 7.3E-10 61.1 8.8 67 34-102 9-75 (77)
240 KOG3762 Predicted transporter 98.0 1.4E-05 3E-10 84.3 7.8 174 30-235 376-550 (618)
241 KOG3574 Acetyl-CoA transporter 98.0 0.0023 5E-08 65.1 22.4 159 20-201 26-189 (510)
242 PRK10207 dipeptide/tripeptide 98.0 8.2E-05 1.8E-09 81.0 13.4 107 372-506 59-168 (489)
243 KOG0637 Sucrose transporter an 97.9 0.00034 7.4E-09 72.7 16.5 163 25-204 32-202 (498)
244 TIGR00769 AAA ADP/ATP carrier 97.9 0.0091 2E-07 64.1 27.5 163 24-205 6-189 (472)
245 PF00083 Sugar_tr: Sugar (and 97.9 2.1E-07 4.6E-12 100.1 -8.3 185 26-234 253-438 (451)
246 TIGR00788 fbt folate/biopterin 97.9 2.9E-05 6.3E-10 84.1 7.7 143 53-216 280-427 (468)
247 PRK15462 dipeptide/tripeptide 97.8 0.00028 6E-09 76.3 13.8 135 370-548 52-189 (493)
248 KOG0254 Predicted transporter 97.8 0.00041 9E-09 76.1 14.9 193 22-233 291-484 (513)
249 KOG0252 Inorganic phosphate tr 97.6 8.1E-05 1.8E-09 77.3 5.0 181 25-232 304-498 (538)
250 TIGR00806 rfc RFC reduced fola 97.5 0.0023 4.9E-08 68.1 15.0 107 368-504 67-173 (511)
251 KOG2325 Predicted transporter/ 97.5 0.001 2.2E-08 70.9 12.4 159 366-553 74-234 (488)
252 PTZ00207 hypothetical protein; 97.4 0.0023 5.1E-08 70.6 13.4 116 403-549 91-206 (591)
253 PF05978 UNC-93: Ion channel r 97.3 0.0038 8.2E-08 56.6 11.5 112 59-202 35-146 (156)
254 KOG2563 Permease of the major 97.2 0.0048 1E-07 64.4 13.3 185 25-237 266-455 (480)
255 PF06609 TRI12: Fungal trichot 97.1 0.0054 1.2E-07 67.5 12.9 157 19-204 304-464 (599)
256 KOG2615 Permease of the major 97.0 0.0046 9.9E-08 63.2 10.3 152 26-207 261-414 (451)
257 PF06779 DUF1228: Protein of u 96.9 0.01 2.2E-07 47.6 9.2 67 46-113 12-78 (85)
258 TIGR00926 2A1704 Peptide:H+ sy 96.8 0.0048 1E-07 69.2 9.7 96 438-550 558-653 (654)
259 KOG2816 Predicted transporter 96.7 0.006 1.3E-07 65.5 9.3 153 23-206 238-391 (463)
260 PRK03612 spermidine synthase; 96.4 0.089 1.9E-06 57.7 16.0 170 33-230 22-196 (521)
261 PF03137 OATP: Organic Anion T 96.4 0.00051 1.1E-08 75.4 -1.6 134 366-509 41-205 (539)
262 KOG3626 Organic anion transpor 96.3 0.039 8.4E-07 61.6 12.0 106 447-553 239-348 (735)
263 KOG0255 Synaptic vesicle trans 96.2 0.089 1.9E-06 57.8 14.8 121 55-206 347-467 (521)
264 PF06963 FPN1: Ferroportin1 (F 95.4 0.36 7.8E-06 51.4 14.4 134 45-201 278-412 (432)
265 KOG1479 Nucleoside transporter 95.3 4.4 9.5E-05 42.5 22.6 58 443-500 341-398 (406)
266 PF06813 Nodulin-like: Nodulin 94.9 0.28 6E-06 48.2 11.2 92 401-505 64-155 (250)
267 COG3104 PTR2 Dipeptide/tripept 94.6 0.25 5.4E-06 52.7 10.5 168 46-234 305-489 (498)
268 PF00854 PTR2: POT family; In 94.4 0.26 5.6E-06 51.6 10.3 124 405-554 3-129 (372)
269 PF03219 TLC: TLC ATP/ADP tran 94.2 8.7 0.00019 41.7 21.4 167 24-206 23-205 (491)
270 PF13000 Acatn: Acetyl-coenzym 94.0 10 0.00023 40.8 22.5 63 446-508 406-468 (544)
271 TIGR00939 2a57 Equilibrative N 93.6 12 0.00026 40.1 27.2 59 444-502 371-429 (437)
272 PF03092 BT1: BT1 family; Int 93.5 0.63 1.4E-05 49.9 11.4 113 406-550 62-177 (433)
273 KOG0637 Sucrose transporter an 93.3 0.28 6.1E-06 51.6 7.9 166 323-502 34-200 (498)
274 PF05978 UNC-93: Ion channel r 92.5 1.5 3.3E-05 39.7 10.6 62 444-505 88-149 (156)
275 KOG3098 Uncharacterized conser 92.4 1.9 4.2E-05 46.1 12.8 133 55-202 272-409 (461)
276 KOG4332 Predicted sugar transp 91.5 1.5 3.3E-05 43.1 9.7 142 62-227 283-426 (454)
277 COG3202 ATP/ADP translocase [E 88.7 38 0.00083 36.5 27.1 161 24-206 26-209 (509)
278 TIGR00769 AAA ADP/ATP carrier 87.3 30 0.00066 37.4 16.9 59 449-507 132-191 (472)
279 PF05631 DUF791: Protein of un 85.4 49 0.0011 34.2 17.8 109 366-504 72-186 (354)
280 PF02487 CLN3: CLN3 protein; 84.6 6.4 0.00014 41.5 9.9 60 139-204 335-394 (402)
281 KOG3097 Predicted membrane pro 84.5 13 0.00028 37.9 11.3 116 21-169 25-140 (390)
282 KOG3880 Predicted small molecu 84.4 28 0.0006 35.3 13.4 47 456-502 353-399 (409)
283 PF07672 MFS_Mycoplasma: Mycop 82.0 29 0.00062 34.2 12.4 57 179-235 4-65 (267)
284 KOG3810 Micronutrient transpor 80.5 26 0.00055 36.2 11.8 95 443-547 324-420 (433)
285 TIGR00939 2a57 Equilibrative N 78.5 14 0.0003 39.6 10.1 58 138-201 371-428 (437)
286 COG0477 ProP Permeases of the 77.0 25 0.00053 33.9 10.9 62 446-507 95-158 (338)
287 PF01770 Folate_carrier: Reduc 74.9 38 0.00083 35.8 11.8 124 36-188 258-383 (412)
288 KOG3810 Micronutrient transpor 67.4 67 0.0015 33.3 11.0 125 35-188 244-369 (433)
289 COG5336 Uncharacterized protei 63.9 22 0.00047 29.7 5.6 37 65-101 46-82 (116)
290 KOG1479 Nucleoside transporter 61.5 1.7E+02 0.0037 30.9 13.2 35 444-479 116-150 (406)
291 PF03219 TLC: TLC ATP/ADP tran 61.5 2.5E+02 0.0054 30.7 19.5 43 464-506 163-205 (491)
292 KOG4830 Predicted sugar transp 53.6 19 0.00041 35.4 4.3 64 30-95 22-94 (412)
293 PF09527 ATPase_gene1: Putativ 52.4 58 0.0012 23.5 5.8 34 68-101 7-40 (55)
294 PF11947 DUF3464: Protein of u 52.0 60 0.0013 29.2 6.9 90 83-196 56-145 (153)
295 PRK03612 spermidine synthase; 50.5 2.1E+02 0.0046 31.4 12.5 66 23-88 15-81 (521)
296 KOG3574 Acetyl-CoA transporter 48.5 2.1E+02 0.0045 30.2 10.9 92 451-549 139-237 (510)
297 PF01733 Nucleoside_tran: Nucl 43.2 7.5 0.00016 39.5 -0.2 58 138-201 247-304 (309)
298 PF07857 DUF1632: CEO family ( 42.7 94 0.002 30.6 7.3 28 476-503 74-101 (254)
299 PF13000 Acatn: Acetyl-coenzym 41.6 1.9E+02 0.0041 31.5 9.8 36 470-505 143-178 (544)
300 TIGR02230 ATPase_gene1 F0F1-AT 36.0 1.3E+02 0.0027 25.1 5.9 32 70-101 51-82 (100)
301 COG5336 Uncharacterized protei 30.8 2E+02 0.0043 24.2 6.2 34 475-508 36-69 (116)
302 COG2119 Predicted membrane pro 30.5 4.3E+02 0.0094 24.6 9.0 36 69-105 142-177 (190)
303 PF02694 UPF0060: Uncharacteri 27.9 3.7E+02 0.0079 22.6 8.1 50 60-110 53-102 (107)
304 PF01891 CbiM: Cobalt uptake s 26.1 4.3E+02 0.0094 24.8 8.9 30 446-475 174-203 (205)
305 PF06912 DUF1275: Protein of u 25.6 5.6E+02 0.012 24.0 14.2 36 186-222 167-202 (209)
306 PF12273 RCR: Chitin synthesis 25.5 36 0.00078 29.7 1.2 16 211-226 1-16 (130)
307 KOG1237 H+/oligopeptide sympor 22.9 1.1E+02 0.0024 34.0 4.7 68 135-208 454-521 (571)
308 PF12832 MFS_1_like: MFS_1 lik 21.8 1.8E+02 0.004 22.6 4.5 29 365-393 37-65 (77)
309 PF11990 DUF3487: Protein of u 21.2 3.7E+02 0.0081 23.1 6.6 41 46-86 5-49 (121)
310 PF06800 Sugar_transport: Suga 21.2 8.2E+02 0.018 24.3 13.5 25 401-425 134-158 (269)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-48 Score=417.36 Aligned_cols=546 Identities=49% Similarity=0.794 Sum_probs=490.0
Q ss_pred cccccCCCCCCCC---CCCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 008182 7 DAVDYKGSPADPS---KTGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGF 83 (575)
Q Consensus 7 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~ 83 (575)
+..|+..++..+. +.+.|+....++..+.+|++++|++..++..|+++.+|.+...+...++.+...+.+.++.+++
T Consensus 16 ~~~d~~~~~~~~~~~~~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~ 95 (571)
T KOG1237|consen 16 TSVDYRGPLLGSSIAFKTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAF 95 (571)
T ss_pred ceeeccCCcccccccceechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4556666666665 7888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCC-CCcCcccccCccchhhHHHHHHHHHHHHcccccccchhc
Q 008182 84 LADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPC-KETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSG 162 (575)
Q Consensus 84 laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~ 162 (575)
++|.++||.+++.++.++..+|.+++.+++..|.+.+++| ...+...|+.++..+...++.++.+.++|.|+.+|+..+
T Consensus 96 laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~ 175 (571)
T KOG1237|consen 96 LADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLA 175 (571)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchh
Confidence 9999999999999999999999999999999999998886 445556899999999999999999999999999999999
Q ss_pred cccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCC
Q 008182 163 FGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSG 242 (575)
Q Consensus 163 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (575)
+.+|++++..+++++.+.+.|.|++...++|..++..+..++++..+|.+.|.++.+...+++++++...+.++++++.+
T Consensus 176 fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~g 255 (571)
T KOG1237|consen 176 FGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRG 255 (571)
T ss_pred hcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCC
Confidence 99999997777667678899999999999999999999999999999999999999999999999999999999988999
Q ss_pred CchhHHHHHHHHHHHhccccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHH
Q 008182 243 SPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKM 322 (575)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (575)
+|...+.+++.++.+++....+.+++.+....+.....++.+...++|++.++.+.+...+....||+.|..+++++.|.
T Consensus 256 sp~t~i~~Vlvaa~~k~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~ 335 (571)
T KOG1237|consen 256 SPKTRIGQVLVAAAFKRKAVVSLDPEELYYDCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKA 335 (571)
T ss_pred CchhHHHHHHHHHHHHHhccCCCcchhccccccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhh
Confidence 99999999999999998888776644441111122344556778899999888766544445678899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccchhhhhhccccccccc-ccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCC-CC
Q 008182 323 VARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGR-FQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKP-GF 400 (575)
Q Consensus 323 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~-~~ 400 (575)
+++.++.+....++++.+.|+.+.+..|...++++.++ +.+|++.+..+..+..++..|+.+++..|+.||..+++ ..
T Consensus 336 ~lr~~Pi~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~ 415 (571)
T KOG1237|consen 336 VLRLLPIWLTTIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGI 415 (571)
T ss_pred hhhhhHHHHHHHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCC
Confidence 99999999999999999999999999999999999987 99999999999999999999999999999999988865 78
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhH
Q 008182 401 TNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKT 480 (575)
Q Consensus 401 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg 480 (575)
+.+.++.+|.++..+++...+..+.+|.+.... ....+.++|..|++++|+++|++|.+...+.+++.++++|++||+
T Consensus 416 t~lqrig~G~~~si~sm~~aa~vE~krl~~~~~--~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS 493 (571)
T KOG1237|consen 416 TPLQRIGIGLVLSILSMAVAGIVEAKRLKTAVS--LLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKS 493 (571)
T ss_pred ChhheeeccchHHHHHHHHHHHHHHHHhhhhhh--ccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHH
Confidence 999999999999999999999999998887653 112345899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc-CCCcccchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 008182 481 MSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLA-DNINRGRLDLFYGLLAILSIINLVIYLICAVWYKPKKP 556 (575)
Q Consensus 481 ~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~-~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~~~~~ 556 (575)
.+++++.+..++|+.++.++++.+....++ ..+|++ +++|.+++.++||+++.+..++...+..+.++++.++.
T Consensus 494 ~~~al~l~t~a~G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~~ 568 (571)
T KOG1237|consen 494 VATALWLLTVAVGNYLSSVLVSLVQFSTGK--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYKDD 568 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeeccc
Confidence 999999999999999999999988766543 468999 99999999999999999999999999998888765543
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=5.8e-42 Score=352.75 Aligned_cols=466 Identities=21% Similarity=0.302 Sum_probs=364.1
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCC----CCchhhHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 008182 15 PADPSKTGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMH----LPSATSANIVTDFMGTSFLLCLLGGFLADTFLG 90 (575)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G 90 (575)
+..+...+|||.++.++.+|++|||+|||+...+..|++.+++ ++.+++..+.+.|....++.++++||++||++|
T Consensus 11 ~~~~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG 90 (498)
T COG3104 11 TLEMKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLG 90 (498)
T ss_pred ccccccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3455566799999999999999999999999999999999988 999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCC
Q 008182 91 RYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDE 170 (575)
Q Consensus 91 r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 170 (575)
+||++..+.+++++|.++++.+. . .....++++.+++++|+|..+|++.++++|++|+
T Consensus 91 ~~~tI~lGail~~iGh~~L~~~~---~-------------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~ 148 (498)
T COG3104 91 TRRTIVLGAILMAIGHLVLAISS---V-------------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPK 148 (498)
T ss_pred hhHHHHHHHHHHHHHHHHHhccc---c-------------------ccccHHHHHHHHHHhccccccccHHHHHHHhcCC
Confidence 99999999999999999998762 0 1255689999999999999999999999999999
Q ss_pred CChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccC--CCCCchhH-
Q 008182 171 KDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKK--SSGSPIVH- 247 (575)
Q Consensus 171 ~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~- 247 (575)
+++| |..+|+++|++.|+|+.++|++.+++.+.+||+..|.++++....+++.++..++.....+ +++.+...
T Consensus 149 ~Dpr----rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~ 224 (498)
T COG3104 149 DDPR----RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFN 224 (498)
T ss_pred CCcc----cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhh
Confidence 9988 9999999999999999999999999999999999999999999999999988887665433 22222111
Q ss_pred -----HHHHHHHHHHh--ccccCCCCccccccCCcccccccCCcchhhhh-HHhhhhcCCcCCCCCCCCCccccchhhhh
Q 008182 248 -----IFQVIVAAIKK--RKMDLPCNVGMLYEDTPEASRIHHTEQFHFLD-KAAIVAEGDFEAGSTPNPWKLCSVTSVEE 319 (575)
Q Consensus 248 -----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (575)
...++...... +.. .+..+.+... ...+..+....+ ....+ .+.. .+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-------------------l~~~~~~~~~~~~~i~~~~~~~~--~~~~~---~~~~-~e 279 (498)
T COG3104 225 FLLPVLGGLVVMILAALLTLL-------------------LNQNTFSGVLLVISILIAIIYFA--EAFRS---PKVF-DE 279 (498)
T ss_pred hhhhhHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHH--HHhcc---CccH-HH
Confidence 11111111110 000 0000001100 000000000000 00111 1122 67
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchhhhhh-cccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCC
Q 008182 320 VKMVARLLPIWATTIIFWTTYAQMITFSVEQA-TTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKP 398 (575)
Q Consensus 320 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~ 398 (575)
+|+++..+++++..++||+++.|+.+.+..+. .+.+++..|+.+|+++++++|++.+++++|+.++++.|+.++.+
T Consensus 280 r~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~--- 356 (498)
T COG3104 280 RRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNK--- 356 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCC---
Confidence 88999999999999999999999999776554 45566656689999999999999999999999999999888753
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcch
Q 008182 399 GFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGM 478 (575)
Q Consensus 399 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~ 478 (575)
+++...++..|+++++.+++++.....+.. .+....|.+|++..++++++||.+.+|..++++++.+|+++
T Consensus 357 ~ps~~~KFalGl~l~g~~fl~l~~~~~~~~---------~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~ 427 (498)
T COG3104 357 QPSTPIKFALGLILAGLGFLILLLAGIWFG---------GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPAL 427 (498)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHhhc---------CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHH
Confidence 578889999999999999999887644321 11336899999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 008182 479 KTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYKP 553 (575)
Q Consensus 479 rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~~ 553 (575)
++.+|+.|.+++..|+.++..+++.... .+ +..+......+|+..+...++..+......++.++
T Consensus 428 ~s~~ma~wfLt~a~~~~l~g~va~~~~~-~~---------~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~r 492 (498)
T COG3104 428 KSFIMAMWFLTVAAGQTLGGQVAGLTAV-TD---------PAYTAFIEGRVFGTIGVVAIVIGILLLLLSPKLNR 492 (498)
T ss_pred HHHHHHHHHHHHHHHHHhhceecccccc-cc---------hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 9999999999999999999888773210 00 01122233566888888888887777777665443
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=3.1e-37 Score=333.49 Aligned_cols=462 Identities=19% Similarity=0.276 Sum_probs=335.8
Q ss_pred CCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Q 008182 21 TGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAA 100 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~ 100 (575)
++|||.++.+++.+++|++++|++..+++.|+++++|++.++++++.+.+.....+..+++|+++||++||||+++++.+
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~ 89 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAI 89 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999993399999999999
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhh
Q 008182 101 VQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA 180 (575)
Q Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 180 (575)
++.++.++++++.+ ....++++|+++++|.|...|+..++++|++|+++++ |+
T Consensus 90 ~~~~g~~~~~~~~~-----------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~----~~ 142 (489)
T PRK10207 90 VLAIGYFMTGMSLL-----------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR----LD 142 (489)
T ss_pred HHHHHHHHHHHhcc-----------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh----hh
Confidence 99999999988632 1233568899999999999999999999999987643 78
Q ss_pred hhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCcccccc--CCCCCchh--HHHHHH----
Q 008182 181 YFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYK--KSSGSPIV--HIFQVI---- 252 (575)
Q Consensus 181 ~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~---- 252 (575)
+++++++++.|+|..++|.+++++.+..||++.|+++.+..+++++.+...++..++. ++++.+.+ ......
T Consensus 143 ~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~ 222 (489)
T PRK10207 143 GAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSV 222 (489)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHH
Confidence 8999999999999999999999999999999999998776666666666655444332 22222221 111100
Q ss_pred -HHHHHhccccCCCCccccccCCcccccccCCcchhhh-hHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHH
Q 008182 253 -VAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFL-DKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIW 330 (575)
Q Consensus 253 -~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 330 (575)
.......... ........ ....+...... -++..+.+.. ++++.+..+.++
T Consensus 223 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~i~~~~f-------~~~~~~~~~~-~r~r~~~~~~l~ 275 (489)
T PRK10207 223 VMIFVCAWLMH-------------------NVEVANLVLIVLSIVVTIIF-------FREAFKLDKT-GRNKMFVAFVLM 275 (489)
T ss_pred HHHHHHHHHHh-------------------hhhHHHHHHHHHHHHHHHHH-------HHHHhcCCHH-HHHHHHHHHHHH
Confidence 0000000000 00000000 00000000000 0000011122 344555566677
Q ss_pred HHHHHHHHhhhcccchhhhhhc-ccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHH
Q 008182 331 ATTIIFWTTYAQMITFSVEQAT-TMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIG 409 (575)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g 409 (575)
+...++|..+.|..+.+..+.. +.+.+..|+.++++.++++|++..+++.|+.+++..++.+|.. ++++..++.+|
T Consensus 276 ~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~---~~~~~~k~~~G 352 (489)
T PRK10207 276 LEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGK---DLSMPMKFTLG 352 (489)
T ss_pred HHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCC---CCCcHHHHHHH
Confidence 8899999999998776655443 4666666788888999999999999999999988777766533 47889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHH
Q 008182 410 LVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTT 489 (575)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~ 489 (575)
+++.+++++.++...... .+ .....+.+|++..+++.++||.+.+|+.++++.+.+|++++|.++|++++.
T Consensus 353 ~~l~~~~~~~~~~~~~~~---~~------~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~ 423 (489)
T PRK10207 353 MFLCSLGFLTAAAAGMWF---AD------AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLT 423 (489)
T ss_pred HHHHHHHHHHHHHHHHhh---cC------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 999999987665332110 00 011456788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 008182 490 LSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYKPK 554 (575)
Q Consensus 490 ~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~~~ 554 (575)
+++|+.+|..+...... .. ....|. ..++.+..+|..+++.+++..+++++..++.++.
T Consensus 424 ~~ig~~lg~~l~~~~~~-~~----~~~~~~-~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 482 (489)
T PRK10207 424 QAAAFLLGGYVATFTAV-PD----NITDPL-ETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRM 482 (489)
T ss_pred HHHHHHHHHHHHHHhcc-cc----ccccch-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988875421 00 011110 0122356778888888888888887777765443
No 4
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=7.7e-37 Score=326.10 Aligned_cols=416 Identities=18% Similarity=0.266 Sum_probs=315.9
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 22 GGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
+|+|.++.+++.++++++++|++..+++.|+++++|++..+++.+.+.+.....++++++|+++||++||||+++++.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 102 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
.+++.++++.... +...++++..+..+|.|...++.+++++|++|+++++ |.+
T Consensus 86 ~~lg~lll~~~~~-----------------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~----R~s 138 (493)
T PRK15462 86 MAIGHVVLGASEI-----------------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR----RDG 138 (493)
T ss_pred HHHHHHHHHHhhc-----------------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc----ccc
Confidence 9999877654311 1223455566677888888899999999999987544 999
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCC-CCCch--hHHHHHH-----H
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKS-SGSPI--VHIFQVI-----V 253 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~-----~ 253 (575)
+++++|+..|+|+.++|.+.+++.+..||++.|.++++..+++++.++..++++.+... ++++. .+..... .
T Consensus 139 gf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (493)
T PRK15462 139 GFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLV 218 (493)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999887777777776665554432211 11111 1110000 0
Q ss_pred HH-----HHhccccCCCCccccccCCcccccccCCcchhhhhH-HhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHH
Q 008182 254 AA-----IKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDK-AAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLL 327 (575)
Q Consensus 254 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 327 (575)
.. +.... ... +....+-. ..+...... ..... +..+.+++|++...+
T Consensus 219 ~~~~~~~~~~~~-------------------~~~-~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~er~r~~~~~ 271 (493)
T PRK15462 219 LLVATPALITVL-------------------FWK-EWSVYALIVATIIGLGVL------AKIYR-KAENQKQRKELGLIV 271 (493)
T ss_pred HHHHHHHHHHHH-------------------HHH-HHHHHHHHHHHHHHHHHH------HHHHH-hcCCHHHHhhHHHHH
Confidence 00 00000 000 00000000 000000000 00000 112235688888999
Q ss_pred HHHHHHHHHHHhhhcccchhhh-hhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHH
Q 008182 328 PIWATTIIFWTTYAQMITFSVE-QATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRM 406 (575)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~ 406 (575)
.+++...+||+.+.|.++.+.. ..+++|+++.|+.+|+++++++|++.+++++|++.+++.++.+|.+ +++...|+
T Consensus 272 ~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~---~~s~~~Kf 348 (493)
T PRK15462 272 TLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNR---TVRIWGKF 348 (493)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCC---CCCcHHHH
Confidence 9999999999999999986543 3468899999999999999999999999999999999877755422 47888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHH
Q 008182 407 AIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLF 486 (575)
Q Consensus 407 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~ 486 (575)
.+|+++.+++++++.+..... +.+ ...+.+|++..++++++||.+..|...+++++.+|++.||++||+|
T Consensus 349 a~g~~~~g~~f~~l~~~~~~~----~~~------~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w 418 (493)
T PRK15462 349 ALGLGLMSAGFCILTLSARWS----AMY------GHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIY 418 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhhc----CCC------CCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHH
Confidence 999999999999887654321 111 1578899999999999999999999999999999999999999999
Q ss_pred HHHH-HHHHHHHHHHHHhh
Q 008182 487 LTTL-SLGFFVSSFLVAVV 504 (575)
Q Consensus 487 ~~~~-~lg~~lg~~l~~~v 504 (575)
.+.. .+|+.+++.+.+..
T Consensus 419 ~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 419 MLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 8854 78888888887754
No 5
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=1.4e-36 Score=328.19 Aligned_cols=454 Identities=19% Similarity=0.267 Sum_probs=335.4
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhc--CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Q 008182 19 SKTGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGT--MHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIA 96 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~ 96 (575)
.+.+++|.++.+++.+++|++++|++.++++.|++++ +|++..+++++.+.+..++.++++++|+++||++||||+++
T Consensus 4 ~~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~ 83 (475)
T TIGR00924 4 TFFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV 83 (475)
T ss_pred cccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH
Confidence 3457899999999999999999999999999999987 99999999999999999999999999999999339999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCC-hHh
Q 008182 97 IFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKD-EKE 175 (575)
Q Consensus 97 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~-~~~ 175 (575)
++.++.+++.++++++.+ ...+++++++.|+|.|...|+..++++|++++++ ++
T Consensus 84 ~~~~~~~~g~~~~~~~~~------------------------~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~- 138 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIY------------------------PDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPR- 138 (475)
T ss_pred HHHHHHHHHHHHHHhccc------------------------HhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCccc-
Confidence 999999999988887622 5567789999999999999999999999998764 22
Q ss_pred hhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhH----H-HH
Q 008182 176 KTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVH----I-FQ 250 (575)
Q Consensus 176 ~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~ 250 (575)
|++++++++++.|+|..+||.+++++.+..||++.|+++++..+++++.+...++..++.++++++.++ . .+
T Consensus 139 ---r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (475)
T TIGR00924 139 ---RDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKL 215 (475)
T ss_pred ---ccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHH
Confidence 888999999999999999999999999989999999998877776666666655544333222211110 0 00
Q ss_pred --H----HHHHHHhccccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHH
Q 008182 251 --V----IVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVA 324 (575)
Q Consensus 251 --~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (575)
. +....+.... ..... .. +.+ ..-........... ....| +.++. ++++..
T Consensus 216 ~~~~~~~~~~~~~~~~~-~~~~~-------~~-~~~-----~~~~~~~~~~~~~~----~~~~~----~~~~~-~~~~~~ 272 (475)
T TIGR00924 216 LLALLAALALVFFCAWL-MHHVV-------IA-NIL-----LMTVTLAVIIFFFR----LAFKP----RLDAV-ARNKMY 272 (475)
T ss_pred HHHHHHHHHHHHHHHHH-HhccH-------HH-HHH-----HHHHHHHHHHHHHH----HHHhc----cCCHH-HHhHHH
Confidence 0 0000000000 00000 00 000 00000000000000 00000 11122 233445
Q ss_pred HHHHHHHHHHHHHHhhhcccchhh-hhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCch
Q 008182 325 RLLPIWATTIIFWTTYAQMITFSV-EQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNL 403 (575)
Q Consensus 325 ~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~ 403 (575)
..+.+++...++|+.+.|+.+.+. ++..+++.++.++.++++++.++|++.+++++|+.++++.++.||.. +++..
T Consensus 273 ~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~---~~~~~ 349 (475)
T TIGR00924 273 AYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGK---DPTTP 349 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCC---CCCcH
Confidence 577888999999999999888654 44456777777889999999999999999999999987766666522 36777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHH
Q 008182 404 QRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMST 483 (575)
Q Consensus 404 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~ 483 (575)
.++.+|.++.+++++.+++.... .+ ++.+.+++|+++.+++.++||.+..|..++++++.+|+++||+++
T Consensus 350 ~k~~~G~~l~~~~~~~~~~~~~~----~~------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~ 419 (475)
T TIGR00924 350 LKFTLGMLFCGASFLTFAASIWF----AD------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQML 419 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh----cC------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHH
Confidence 78999999999999988765221 11 112578899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhhhcC
Q 008182 484 GLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYK 552 (575)
Q Consensus 484 g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~ 552 (575)
|++.+...+|+.+++.+...... ..+...+|...+...++..+++++..++.+
T Consensus 420 g~~~l~~~~g~~l~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
T TIGR00924 420 GMWFLAQAMGSLLGGYLATFGAV----------------PQGVTGVFGKIGLVTLLVGVVMALMVPWLN 472 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----------------ccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998875431 111245677777777777777777666543
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=7.6e-35 Score=316.39 Aligned_cols=461 Identities=19% Similarity=0.270 Sum_probs=330.0
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Q 008182 17 DPSKTGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIA 96 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~ 96 (575)
+.+..+++|.++.+++.++++++++|++..+++.|+++++|++.++++++.+.+........+++|+++||++|||++++
T Consensus 13 ~~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~ 92 (500)
T PRK09584 13 SLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIM 92 (500)
T ss_pred ChhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 34445678889999999999999999999999999999999999999999988887777778899999999449999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhh
Q 008182 97 IFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEK 176 (575)
Q Consensus 97 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 176 (575)
++.++++++..+++++++ +...++++++++++|.|...++..++++|++|+++++
T Consensus 93 ~g~~~~~ig~~l~~~~~~-----------------------~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~-- 147 (500)
T PRK09584 93 LGAIVLAIGYALVAWSGH-----------------------DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR-- 147 (500)
T ss_pred HHHHHHHHHHHHHHHhcc-----------------------cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh--
Confidence 999999999888877521 2445678899999999999999999999999876643
Q ss_pred hhhhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCcccccc--CCCCCchh--HHH---
Q 008182 177 TQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYK--KSSGSPIV--HIF--- 249 (575)
Q Consensus 177 ~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~--- 249 (575)
|..++++++++.++|..++|.+++++.+..||++.|+++++..+++++.+++.++..+++ ++++++.+ ...
T Consensus 148 --~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (500)
T PRK09584 148 --LDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTI 225 (500)
T ss_pred --hhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHH
Confidence 667899999999999999999999999999999999998876666665554444333222 12211211 111
Q ss_pred -HHHHH-HHHhccccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHH
Q 008182 250 -QVIVA-AIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLL 327 (575)
Q Consensus 250 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 327 (575)
..... .........++.. . ............... ...++.++ .++++.+..+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~----------~-----~~~~~~~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~ 279 (500)
T PRK09584 226 VGVVALIAIATWLLHNQEIA----------R-----MALGVVALGIVVIFG----------KEAFAMKG-AARRKMIVAF 279 (500)
T ss_pred HHHHHHHHHHHHHHhcchHH----------H-----HHHHHHHHHHHHHHH----------HHHhhcCH-HHHHHHHHHH
Confidence 11111 1111000000000 0 000000000000000 00001122 3455555666
Q ss_pred HHHHHHHHHHHhhhcccchhhhhhc-ccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHH
Q 008182 328 PIWATTIIFWTTYAQMITFSVEQAT-TMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRM 406 (575)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~ 406 (575)
..++..+++|+.+.|.++.+..+.. +.+++..|+.+++++++++|++.+++++|+.+++..++.+| .+..+++
T Consensus 280 ~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r------~~~~~~~ 353 (500)
T PRK09584 280 ILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDR------LPMPHKF 353 (500)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC------CCcHHHH
Confidence 7788899999999999988776543 45666677888999999999999999999998876554433 4677889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHH
Q 008182 407 AIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLF 486 (575)
Q Consensus 407 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~ 486 (575)
.+|.++.+++++.+.....+ .+. ....+.+|+++.++++++||.+..|...+++.+.+|+++||+++|++
T Consensus 354 ~~G~~l~~l~f~~l~~~~~~----~~~------~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~ 423 (500)
T PRK09584 354 AIGMVLCSGAFLVLPLGAKF----AND------AGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSW 423 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHh----cCC------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHH
Confidence 99999999999998776432 111 12567779999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCC-CcccchhHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 008182 487 LTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADN-INRGRLDLFYGLLAILSIINLVIYLICAVWYKP 553 (575)
Q Consensus 487 ~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~-~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~~ 553 (575)
.+...+|+.+++.+.+.... +. -..+. ...+++..+|...++++++..++.+...++.++
T Consensus 424 ~l~~a~g~~~~g~~~~~~~~---~~----~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k 484 (500)
T PRK09584 424 FLTTAGAALIAGYVANLMAV---PD----NVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNR 484 (500)
T ss_pred HHHHHHHHHHHHHHHHHhcc---cc----ccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888764320 00 00000 111235677777887777766666666665544
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.95 E-value=2.5e-26 Score=253.39 Aligned_cols=339 Identities=29% Similarity=0.492 Sum_probs=277.8
Q ss_pred HHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 008182 39 LSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQL 118 (575)
Q Consensus 39 ~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~ 118 (575)
++||++...+..|+++.+|++.+++..+...+.....+.++++|+++|+++||++++.++.+++.+|.+++++++..+.
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~- 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSS- 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccc-
Confidence 4789999999999999999999999999999999999999999999999999999999999999999998887532111
Q ss_pred CCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHH
Q 008182 119 RPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAV 198 (575)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~ 198 (575)
.+..+....+++..+.++|.|+.+|+..++.+|+++++++ ++|.++|.++|+++|+|+.+++
T Consensus 80 ---------------~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGSlis~ 141 (654)
T TIGR00926 80 ---------------GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGSLIST 141 (654)
T ss_pred ---------------ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHHHHHH
Confidence 0012244577889999999999999999999999986542 2389999999999999999999
Q ss_pred HHHhhhcccc-------cchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCCCCccccc
Q 008182 199 TVLVYIQDEI-------SRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLY 271 (575)
Q Consensus 199 ~i~~~l~~~~-------~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (575)
++.+++.+.. +|...|.++++.++++++++...+++++.+++.+++..++.+++..+.+++....++
T Consensus 142 ~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~------ 215 (654)
T TIGR00926 142 IITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSE------ 215 (654)
T ss_pred HHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCc------
Confidence 9999997443 699999999999999999988888877777776666777777777666653221110
Q ss_pred cCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhcccchhhhhh
Q 008182 272 EDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQA 351 (575)
Q Consensus 272 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 351 (575)
....+|.+.+... + ..+++++.|++++.+.+++...++|..+.|+.+.+..|.
T Consensus 216 -----------~~~~~~ld~a~~~-------------~---~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa 268 (654)
T TIGR00926 216 -----------HWPLHWLDYAKDK-------------H---DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQA 268 (654)
T ss_pred -----------ccchhHHHHhccc-------------c---ccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 0112344443211 1 234578889999999999999999999999999999998
Q ss_pred cccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008182 352 TTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVA 431 (575)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 431 (575)
..++.+++++.+++++++.++++.++++.|++++.+.+..+|.+. ..++..++.+|.+++++++++.+..+..++++.
T Consensus 269 ~~m~~~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~--~ls~l~k~~iG~~la~la~~va~~ve~~~~~~~ 346 (654)
T TIGR00926 269 TRMDGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGT--RFTSLRKMAVGGLLAALSFFVAALVQLKVNPTL 346 (654)
T ss_pred HHhcCccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCC--CCChHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 888877778889999999999999999999999888888777543 478899999999999999999999987776544
No 8
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.94 E-value=4.7e-24 Score=225.80 Aligned_cols=376 Identities=12% Similarity=0.059 Sum_probs=247.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 22 GGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
+.+|.+..+++..+...++.....+.++.|+.+++|.|..+.+++.+++.++..+++++.|+++||+ ||||+++++.++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~ 90 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCG 90 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHH
Confidence 3456677788888888898888889999999999999999999999999999999999999999999 999999999998
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 102 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
.+++.+.+.++...+. ....+...+++.|+++|++.+...+...+++.|.+++++ |++
T Consensus 91 ~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~ 148 (399)
T PRK05122 91 CALSGLLYLLAGLLAA----------------WPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------TGR 148 (399)
T ss_pred HHHHHHHHHHhhhhhc----------------cchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------hcc
Confidence 8887766655421111 000235678999999999999999999999999999888 999
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccc
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKM 261 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (575)
++++.....++|..+++.+++++.+..+|+..+++..+..++.++.. ...+ ++++++++
T Consensus 149 ~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~----------------- 207 (399)
T PRK05122 149 VISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA-RPRP---AVPPVKGE----------------- 207 (399)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH-hcCC---CCCCCCcc-----------------
Confidence 99999889999999999999999888999998887665544333222 1111 11110000
Q ss_pred cCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHH-HHHHHHHHHHHhh
Q 008182 262 DLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLL-PIWATTIIFWTTY 340 (575)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~ 340 (575)
+.++. +..|...... ...+....+....
T Consensus 208 -----------------------~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 236 (399)
T PRK05122 208 -----------------------RLPFR----------------------------RVLGRVWPYGMGLALASIGFGTIA 236 (399)
T ss_pred -----------------------chhHH----------------------------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0000000000 0111111111111
Q ss_pred hcccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHH
Q 008182 341 AQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAA 420 (575)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~ 420 (575)
...+ .+..+ .+. . ..+.......+...+..++.+++ .+|. ++.+.+..+..+.+++++..
T Consensus 237 ~~~~-~~~~~-~~~--~------~~~~~~~~~~~~~~~~~~~~g~l----~~r~------~~~~~~~~~~~~~~~~~~~~ 296 (399)
T PRK05122 237 TFIT-LYYAA-RGW--D------GAALALTLFGVAFVGARLLFGNL----INRL------GGLRVAIVSLLVEILGLLLL 296 (399)
T ss_pred HHHH-HHHHH-ccc--c------cchHHHHHHHHHHHHHHHHHHHH----HHHh------ccHHHHHHHHHHHHHHHHHH
Confidence 1111 11111 111 0 11112223333334444444444 3332 22233556666666666555
Q ss_pred HHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 008182 421 ALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFL 500 (575)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l 500 (575)
... .+.+.+++..++.|++.+...|.......+..|++.||+++|+++....+|..+++.+
T Consensus 297 ~~~-------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 357 (399)
T PRK05122 297 WLA-------------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPL 357 (399)
T ss_pred HHh-------------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 432 1333455667888999988888887788889999999999999999999999999999
Q ss_pred HHhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhh
Q 008182 501 VAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLIC 547 (575)
Q Consensus 501 ~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~ 547 (575)
.+.+.+.. +.+..|++.+++.+++.+..+..
T Consensus 358 ~g~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 358 AGLVASWF----------------GYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred HHHHHHHc----------------CHHHHHHHHHHHHHHHHHHHHHh
Confidence 98876422 13566777777777766555444
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=2.5e-24 Score=227.31 Aligned_cols=374 Identities=14% Similarity=0.107 Sum_probs=240.9
Q ss_pred CcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 008182 23 GWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQ 102 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 102 (575)
+|..++.+.+..++.....|...+.+ +.+.+++|.+..+.+++.+.+.++..+++++.|+++||+ ||||++.++.++.
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~-~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~ 84 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLL-SDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLF 84 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcch-HHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHH
Confidence 34455555555555444444333334 456778999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 103 TLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
.++.+++++++ +...+++.|+++|++.+...+...+++.|++|+++ |+++
T Consensus 85 ~~~~~~~~~~~------------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~ 134 (390)
T PRK03545 85 IASHVLSALAW------------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------KAQA 134 (390)
T ss_pred HHHHHHHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------hhhH
Confidence 99999888873 37778999999999999888999999999999888 9999
Q ss_pred hhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhcccc
Q 008182 183 FSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMD 262 (575)
Q Consensus 183 ~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (575)
+++.....++|..++|.+++.+.+..|||+.|++.++..++..+......|+.++ +++.+..+
T Consensus 135 ~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~--------------- 197 (390)
T PRK03545 135 LSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPS--EHSGSLKS--------------- 197 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CCcchHHH---------------
Confidence 9999999999999999999999988999999999887766555444333332111 00000000
Q ss_pred CCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhc
Q 008182 263 LPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQ 342 (575)
Q Consensus 263 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 342 (575)
. ... .++.+........+......+.....
T Consensus 198 -------------------------~---~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (390)
T PRK03545 198 -------------------------L---PLL----------------------FRRPALVSLYLLTVVVVTAHFTAYSY 227 (390)
T ss_pred -------------------------H---HHH----------------------HhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 00111111111111111222222111
Q ss_pred ccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 008182 343 MITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAAL 422 (575)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 422 (575)
.+. +.....+.+.. ..+.+.....+..++...+.+++ .+|..+ +.+..+..+..++......
T Consensus 228 ~~~-~l~~~~g~s~~------~~~~~~~~~~~~~~~g~~~~g~l----~dr~~~-------~~~~~~~~~~~~~~~~l~~ 289 (390)
T PRK03545 228 IEP-FVQQVAGLSEN------FATLLLLLFGGAGIIGSVLFSRL----GNRHPS-------GFLLIAIALLLVCLLLLLP 289 (390)
T ss_pred HHH-HHHHhcCCCcc------HHHHHHHHHHHHHHHHHHHHHHH----hhccch-------hHHHHHHHHHHHHHHHHHH
Confidence 111 11111111111 11222333334444444444444 343221 1244455554454433322
Q ss_pred HHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008182 423 VERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVA 502 (575)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~ 502 (575)
. ..+...+++..++.|++.....+.....+.+..| +.||+++|+++....+|..+|+.+.|
T Consensus 290 ~------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G 350 (390)
T PRK03545 290 A------------------ANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGN 350 (390)
T ss_pred H------------------hchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 1233445667778888887777777788888777 57899999999999999999999999
Q ss_pred hhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhh
Q 008182 503 VVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICA 548 (575)
Q Consensus 503 ~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~ 548 (575)
.+.+..+ ....|+..+.+.+++.+..+...
T Consensus 351 ~~~~~~g----------------~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 351 QVSLHLG----------------LSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHhccC----------------hhHHHHHHHHHHHHHHHHHHHHc
Confidence 8875322 35667777777777777665554
No 10
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=1.7e-24 Score=229.08 Aligned_cols=357 Identities=11% Similarity=0.084 Sum_probs=235.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 22 GGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
+.+|.++.+++..++..++++.+.++++.|+++++|++..+.+++.+.+.+.+.+++++.|+++||+ |||++++++.++
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~ 82 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITA 82 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHH
Confidence 4567788899999999999999999999999999999999999999999999999999999999998 999999999998
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 102 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
..++.++.+++++ .+.+++.+.+.+.+.+...++..+...|.+++++ |++
T Consensus 83 ~~~~~~~~~~~~~------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~ 132 (395)
T PRK10054 83 FASGFIAIPLVNN------------------------VTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------KTK 132 (395)
T ss_pred HHHHHHHHHHHhH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------HHH
Confidence 8888888877632 5556777878777777777888889999998887 999
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccc
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKM 261 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (575)
++++.+...++|..++|.+++++.+ .+|+.+|++.++..++.++...+..++.+++++++ + .+.
T Consensus 133 ~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~-~-~~~------------- 196 (395)
T PRK10054 133 IFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATE-T-GSV------------- 196 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccccccc-h-hhh-------------
Confidence 9999999999999999999999875 78999999887776666544433333221111000 0 000
Q ss_pred cCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhh
Q 008182 262 DLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYA 341 (575)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 341 (575)
.+.... .++++.....+..++..........
T Consensus 197 ---------------------------~~~~~~----------------------~~~~~~~~~~~~~~l~~~~~~~~~~ 227 (395)
T PRK10054 197 ---------------------------WSPSVL----------------------LQDKALLWFTCSGFLASFVSGAFAS 227 (395)
T ss_pred ---------------------------hhhhhh----------------------ccCceehHHHHHHHHHHHHHHHhhh
Confidence 000000 0011111111111111111111111
Q ss_pred cccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHH
Q 008182 342 QMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAA 421 (575)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 421 (575)
. ...+.....+.+.+ ....+.+...+.+......+ ...++.+|+ ++.+.+..+.++..++.+.+.
T Consensus 228 ~-~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~----~~g~~~~~~------~~~~~l~~~~~~~~~~~~~~~ 292 (395)
T PRK10054 228 C-ISQYVMVVADSDFA----EKVVAVVLPVNAAMVVSLQY----SVGRRLNAA------NIRPLMTAGTLCFVIGLVGFI 292 (395)
T ss_pred h-HHHHHHHhcccchH----HHHHHHHHHhhhhheeeehh----HHHHHHccC------CchhHHHHHHHHHHHHHHHHH
Confidence 1 11111110011100 00011122222222222222 222333332 233345667767777666554
Q ss_pred HHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 008182 422 LVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLV 501 (575)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~ 501 (575)
.. ..+.+.+.+..++.++|+....|.....+.+.+|++.||++.+..+ ...+|..+|+.+.
T Consensus 293 ~~------------------~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~ 353 (395)
T PRK10054 293 FS------------------GNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVS 353 (395)
T ss_pred Hc------------------chHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHH
Confidence 32 1122234556789999999889999999999999999999998765 5668999999999
Q ss_pred Hhhhhhc
Q 008182 502 AVVKKVT 508 (575)
Q Consensus 502 ~~v~~~~ 508 (575)
|.+.+..
T Consensus 354 G~l~~~~ 360 (395)
T PRK10054 354 GVILTTL 360 (395)
T ss_pred HHHHHHc
Confidence 9987654
No 11
>PRK12382 putative transporter; Provisional
Probab=99.93 E-value=2.3e-23 Score=220.09 Aligned_cols=376 Identities=11% Similarity=0.069 Sum_probs=242.8
Q ss_pred CcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 008182 23 GWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQ 102 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 102 (575)
..+.++.+.+..++..++.+...+.+|.|+.+++|.|..+.+++.+.+.++..+++++.|+++||+ ||||+++++.+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~ 91 (392)
T PRK12382 13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLAC 91 (392)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHH
Confidence 345677777777888888877888899999999999999999999999999999999999999999 9999999998877
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 103 TLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
.++.+....+...+. ....+...++++|+++|++.+...+...+.+.|.+|+++ |+++
T Consensus 92 ~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~a 149 (392)
T PRK12382 92 GLAGLAYLLAAILPV----------------SAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGKV 149 (392)
T ss_pred HHHHHHHHhhhcccc----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cchh
Confidence 766543322211110 001347788999999999999888888889999999888 9999
Q ss_pred hhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhcccc
Q 008182 183 FSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMD 262 (575)
Q Consensus 183 ~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (575)
+++...+.++|..++|.+++++.+..+|++.+.+..+..++.+.. .. +.++.+++++...
T Consensus 150 ~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~---------------- 209 (392)
T PRK12382 150 MSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAF---NG-TVRKVPAHAGERP---------------- 209 (392)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH---HH-hccCCCCCcccCc----------------
Confidence 999999999999999999999988889998776554433322221 11 1111111000000
Q ss_pred CCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhc
Q 008182 263 LPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQ 342 (575)
Q Consensus 263 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 342 (575)
+..+.. +.... +.+ ...+....+......
T Consensus 210 ------------------------~~~~~~----------------------~~~~~-~~~----~~~l~~~~~~~~~~~ 238 (392)
T PRK12382 210 ------------------------SLWSVV----------------------GLIWK-PGL----GLALQGVGFAVIGTF 238 (392)
T ss_pred ------------------------hHHHHH----------------------HHHHH-hHH----HHHHHHHHHhHHHHH
Confidence 000000 00000 000 011111111111111
Q ss_pred ccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 008182 343 MITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAAL 422 (575)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 422 (575)
.+ .+..+ .+. + ..........+..++..++.+++.+|..+| +.+..+..+.+++++....
T Consensus 239 ~~-~~~~~-~~~--~------~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~----------~~~~~~~~~~~~~~~~~~~ 298 (392)
T PRK12382 239 VS-LYFAS-KGW--A------MAGFTLTAFGGAFVLMRVLFGWMPDRFGGV----------KVAIVSLLVETVGLLLLWL 298 (392)
T ss_pred HH-HHHHh-cCC--c------hhHHHHHHHHHHHHHHHHHHHHHHHhcCCC----------eehHHHHHHHHHHHHHHHH
Confidence 11 11111 010 0 111112223333444455555554433322 2255566666666655443
Q ss_pred HHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008182 423 VERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVA 502 (575)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~ 502 (575)
. .+....++..++.+++.+...|.......+..|++.||+++|+++....+|..+++.+.+
T Consensus 299 ~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g 359 (392)
T PRK12382 299 A-------------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAG 359 (392)
T ss_pred c-------------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 123345566788888888888888888889999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhh
Q 008182 503 VVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLIC 547 (575)
Q Consensus 503 ~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~ 547 (575)
.+.+..+ ....|.+.+++.+++.+..+..
T Consensus 360 ~l~~~~g----------------~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 360 MLATSFG----------------YPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHhC----------------chHHHHHHHHHHHHHHHHHHhh
Confidence 8875332 2566777777777666655443
No 12
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=9.1e-24 Score=223.83 Aligned_cols=348 Identities=13% Similarity=0.095 Sum_probs=234.7
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Q 008182 28 ALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTG 107 (575)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~ 107 (575)
+.++...++..++++.+.+.++.|+++++|++..+.|.+.+...+...+.++++|+++||+ |||+++.++.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 5677888999999999999999999999999999999999999999999999999999999 999999999999999988
Q ss_pred HHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhh
Q 008182 108 MLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFF 187 (575)
Q Consensus 108 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 187 (575)
++.+++ +.+.+++.|++.|++.+...|...+++.|.+|+++ |++++++.+
T Consensus 92 ~~~~~~------------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~~~ 141 (400)
T PRK11646 92 TMAIAH------------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSLLM 141 (400)
T ss_pred HHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHH
Confidence 887652 36678889999999998888888999999999888 999999999
Q ss_pred hhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCCCCc
Q 008182 188 FFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNV 267 (575)
Q Consensus 188 ~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (575)
...++|..+||.+++++. ..+|++.|++.++..++..+...+..++.+.+ +.+++..+
T Consensus 142 ~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~-------------------- 199 (400)
T PRK11646 142 MQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLS-TVRTPVRE-------------------- 199 (400)
T ss_pred HHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccc-ccchhhHH--------------------
Confidence 999999999999999998 67999999988776655544433332221100 00000000
Q ss_pred cccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhcccchh
Q 008182 268 GMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFS 347 (575)
Q Consensus 268 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 347 (575)
++ ... .++ +.+......+ ..++....+.....
T Consensus 200 -------------------~~---~~~----------------------~~~-~~~~~~~~~~---~~~~~~~~~~~~~~ 231 (400)
T PRK11646 200 -------------------GM---TRV----------------------LRD-KRFVTYVLTL---TGYYMLAVQVMLML 231 (400)
T ss_pred -------------------HH---HHH----------------------HcC-chHHHHHHHH---HHHHHHHHHHHHhh
Confidence 00 000 001 1111111111 11111111111111
Q ss_pred hhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008182 348 VEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKR 427 (575)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 427 (575)
+.. .... ++.....+.+..+..+...... ....++.+|+ .+..+.+..+.++.+++++.++..
T Consensus 232 p~~---~~~~-~~~~~~~g~l~~~~~~~~~~~~----~~~~~~~~~r-----~~~~~~~~~~~~~~~~~~~~l~~~---- 294 (400)
T PRK11646 232 PIM---VNDI-AGSPSAVKWMYAIEACLSLTLL----YPIARWSEKR-----FRLEHRLMAGLLIMSLSMFPIGMV---- 294 (400)
T ss_pred hhh---HHhh-cCCchHHHHHHHHHHHHHHHHH----HHHHHHHHHh-----cchhHHHHHHHHHHHHHHHHHHHh----
Confidence 110 0000 0000011122222222222221 1222223321 222334666777777776655543
Q ss_pred HHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008182 428 LSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKV 507 (575)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~ 507 (575)
.+..+++...++.+++.....|...+++.+.+|++.||+++|++++...+|..+|+.+.|.+.+.
T Consensus 295 ---------------~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 295 ---------------SNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred ---------------hhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 12233445567788888888999999999999999999999999999999999999999998865
Q ss_pred c
Q 008182 508 T 508 (575)
Q Consensus 508 ~ 508 (575)
.
T Consensus 360 ~ 360 (400)
T PRK11646 360 G 360 (400)
T ss_pred H
Confidence 4
No 13
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=6e-23 Score=210.26 Aligned_cols=380 Identities=14% Similarity=0.147 Sum_probs=258.0
Q ss_pred CCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Q 008182 21 TGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAA 100 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~ 100 (575)
+..|..++.+.+..|+-...=+.....+|. +.+++|.|..++|++++.|.++..++.|+...+.||+ .||++++..+.
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~-iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~ 86 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPP-IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLA 86 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHH
Confidence 445667777777777766666655555544 5669999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhh
Q 008182 101 VQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA 180 (575)
Q Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 180 (575)
++.++.++++++++ +..+.++|++.|+..|.+.+...+..++..|+++ |+
T Consensus 87 lFi~~n~l~alAp~------------------------f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~ 136 (394)
T COG2814 87 LFIVSNLLSALAPS------------------------FAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RG 136 (394)
T ss_pred HHHHHHHHHHHhcc------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hh
Confidence 99999999999933 8889999999999999999999999999999999 99
Q ss_pred hhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhcc
Q 008182 181 YFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRK 260 (575)
Q Consensus 181 ~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (575)
++.++...+..+...+|..++.++.+.+|||..|+..++..+++++..+...|+....++++.+..+..+.
T Consensus 137 ~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~~~~~~~~~~--------- 207 (394)
T COG2814 137 RALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLPPSEISGSLPGPLRTLLRL--------- 207 (394)
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCcchhHHHHH---------
Confidence 99999999999999999999999999999999999998888888777776666110111111111111100
Q ss_pred ccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhh
Q 008182 261 MDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTY 340 (575)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 340 (575)
.++.+....+...++.....+..|
T Consensus 208 --------------------------------------------------------l~~p~v~~~l~~t~l~~~g~F~~f 231 (394)
T COG2814 208 --------------------------------------------------------LRRPGVLLGLLATFLFMTGHFALY 231 (394)
T ss_pred --------------------------------------------------------hcCchHHHHHHHHHHHHcchhhhH
Confidence 011111212222223333333333
Q ss_pred hcccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHH
Q 008182 341 AQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAA 420 (575)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~ 420 (575)
.+...++ .+..+++.+ ..+.......+..++...+.+++ .+| ++.+.+.....+.++.++.+
T Consensus 232 tYi~P~L-~~v~g~s~~------~vs~~Ll~~Gv~~~~Gn~~gGrl----~dr-------~~~~~l~~~~~l~a~~~l~l 293 (394)
T COG2814 232 TYIRPFL-ESVAGFSVS------AVSLVLLAFGIAGFIGNLLGGRL----ADR-------GPRRALIAALLLLALALLAL 293 (394)
T ss_pred HhHHHHH-HHccCCCHh------HHHHHHHHHHHHHHHHHHHHhhh----ccc-------cchhHHHHHHHHHHHHHHHH
Confidence 3222211 111111111 12223333444444444444444 443 22333555656777777666
Q ss_pred HHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 008182 421 ALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFL 500 (575)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l 500 (575)
.+. ..+.+..+...++.+++........+....+.+ ++.++.+++++....++|..+|..+
T Consensus 294 ~~~------------------~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~GA~l 354 (394)
T COG2814 294 TFT------------------GASPALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIALGAAL 354 (394)
T ss_pred HHh------------------cchHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHHHHHHH
Confidence 554 223334444555566655555555555555544 4669999999999999999999999
Q ss_pred HHhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhhh
Q 008182 501 VAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVW 550 (575)
Q Consensus 501 ~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~ 550 (575)
.|.+.+..+ +....++.+.+.+++.+..+...++
T Consensus 355 GG~v~~~~g----------------~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 355 GGLVLDALG----------------YAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHhhc----------------hHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999876432 3555677777777776666555443
No 14
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=3.5e-23 Score=219.53 Aligned_cols=358 Identities=14% Similarity=0.092 Sum_probs=231.4
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 22 GGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
.+|..+...+...+++.+..+......| .+.+++|+++.+.+++.+.+.++..+++++.|+++||+ |||+++.++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 89 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVAL 89 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHH
Confidence 4455666666677777777766555554 55668999999999999999999999999999999999 999999999988
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 102 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
..++.++++++. +...+++.|++.|++.+...+...+++.|.+++++ |++
T Consensus 90 ~~~~~~~~~~~~------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~ 139 (406)
T PRK11551 90 FGLFSLATAQAW------------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------RGT 139 (406)
T ss_pred HHHHHHHHHHhc------------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------HHH
Confidence 888887777762 36678899999999999999999999999999888 999
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccc
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKM 261 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (575)
++++.+...++|..+++.+++.+.+..+|++.|++.++..++..+......++.++..+++....
T Consensus 140 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--------------- 204 (406)
T PRK11551 140 AVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGK--------------- 204 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcch---------------
Confidence 99999999999999999999999888899999998776555444443333232111000000000
Q ss_pred cCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhh
Q 008182 262 DLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYA 341 (575)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 341 (575)
+.....+. .. +. .+..+........+......+....
T Consensus 205 ----------------------~~~~~~~~--~~-----------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (406)
T PRK11551 205 ----------------------QRAPVLRA--LF-----------------GE--GRATATLLLWISYFFTLIVLYFLLN 241 (406)
T ss_pred ----------------------hhhhhHHH--Hh-----------------hh--hhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000 00 00 0011111111111111112222211
Q ss_pred cccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHH
Q 008182 342 QMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAA 421 (575)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 421 (575)
+.+. +.. ..+.+. ...+.......+..++...+.+++.+|+.+| +.+..+.+...++++.+.
T Consensus 242 ~~p~-~~~-~~g~s~------~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~----------~~~~~~~~~~~~~~~~~~ 303 (406)
T PRK11551 242 WLPS-LLV-GQGLSR------SQAGLVQIAFNIGGALGSLLIGALMDRLRPR----------RVVLLIYAGILASLAALA 303 (406)
T ss_pred HHHH-HHH-hCCCCh------hhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH----------HHHHHHHHHHHHHHHHHH
Confidence 1111 111 111111 1122333444455555555666665544332 123334444444443333
Q ss_pred HHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 008182 422 LVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLV 501 (575)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~ 501 (575)
.. .+...+....++.+++.....+..+++..+.+|++.||+++|+.+....+|..+++.+.
T Consensus 304 ~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~ 364 (406)
T PRK11551 304 AA-------------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLA 364 (406)
T ss_pred hc-------------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhH
Confidence 21 12334455666777777777888889999999999999999999999999999999999
Q ss_pred Hhhhh
Q 008182 502 AVVKK 506 (575)
Q Consensus 502 ~~v~~ 506 (575)
+.+.+
T Consensus 365 g~l~~ 369 (406)
T PRK11551 365 GQLLA 369 (406)
T ss_pred hhhhc
Confidence 98764
No 15
>PRK10504 putative transporter; Provisional
Probab=99.93 E-value=4.2e-23 Score=223.45 Aligned_cols=401 Identities=11% Similarity=0.041 Sum_probs=243.8
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
.|.++.+.+..++..+..+.+.+.+|.+.. ++|.+..+.+++.+.+.++..++.+++|+++||+ ||||+++.+.++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 456788888888988888888888888775 6999999999999999999999999999999999 99999999998888
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
++.+++.++. +...++++|+++|++.+...|...+.+.|.+|+++ |++++
T Consensus 87 ~~~~~~~~~~------------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 136 (471)
T PRK10504 87 LGSLFCALSG------------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------YMAAM 136 (471)
T ss_pred HHHHHHHHhC------------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------HHHHH
Confidence 8888777652 26668899999999999999999999999998877 99999
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHH--HHHhccc
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVA--AIKKRKM 261 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 261 (575)
++.....++|..++|.+++++.+..+|++.|++......+..+......++.+.++. +.+.......... .+... .
T Consensus 137 ~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~-~ 214 (471)
T PRK10504 137 TFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTR-RFDLSGFLLLAVGMATLTLA-L 214 (471)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCC-CCChHHHHHHHHHHHHHHHH-H
Confidence 999999999999999999999999999999998877666665555444443322111 1111111110000 00000 0
Q ss_pred cCCCCccccccCCcccccccCCcchhhhhHHh------hhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHH
Q 008182 262 DLPCNVGMLYEDTPEASRIHHTEQFHFLDKAA------IVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTII 335 (575)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 335 (575)
.+.. +................ ..++.. ...|. ...+ ....|.+...+...+....
T Consensus 215 --~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--~~~~-l~~~~~~~~~l~~~~~~~~ 275 (471)
T PRK10504 215 --DGSK---------GLGLSPLAIAGLVAVGVVALLLYLLHARN-----NNRAL--FSLK-LFRTRTFSLGLAGSFAGRI 275 (471)
T ss_pred --hcCC---------cCCcchHHHHHHHHHHHHHHHHHHHHHhc-----CCCCc--cCHH-HhcccchHHHHHHHHHHHH
Confidence 0000 00000000000000000 000000 00010 0111 1112222222111111111
Q ss_pred HHHhhhcccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHH
Q 008182 336 FWTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIV 415 (575)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~ 415 (575)
...........+.....+.+ ....+.......+..++..++..++ .+|+ ++.+.+..+..+.++
T Consensus 276 ~~~~~~~~~~~~~~~~~g~~------~~~~g~~~~~~~~~~~~~~~~~~~l----~~r~------g~~~~~~~~~~~~~~ 339 (471)
T PRK10504 276 GSGMLPFMTPVFLQIGLGFS------PFHAGLMMIPMVLGSMGMKRIVVQV----VNRF------GYRRVLVATTLGLAL 339 (471)
T ss_pred HHHHHHHHHHHHHHHHcCCC------HHHHHHHHHHHHHHHHHHHHHHHHH----HHHc------CchHHHHHHHHHHHH
Confidence 11111111111211111111 1111122222233333333444444 4443 223335666666666
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHH
Q 008182 416 GMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFF 495 (575)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~ 495 (575)
+.+.+..... ..+..++....++.|++.++.++..+..+.+.+|++.+|+++|++++.+.+|..
T Consensus 340 ~~~~~~~~~~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ 403 (471)
T PRK10504 340 VSLLFMLVAL----------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMS 403 (471)
T ss_pred HHHHHHhccc----------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHH
Confidence 6555443210 112222344567778888888989999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcC
Q 008182 496 VSSFLVAVVKKVTG 509 (575)
Q Consensus 496 lg~~l~~~v~~~~~ 509 (575)
+|+.+.+.+.+..+
T Consensus 404 ig~~i~g~ll~~~g 417 (471)
T PRK10504 404 IGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999998876654
No 16
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.93 E-value=1.5e-23 Score=223.32 Aligned_cols=392 Identities=13% Similarity=0.047 Sum_probs=241.7
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.+..++...++..++.......+|.+.. +++.++.+.+++.+.+.++..+++++.|+++||+ |||+++.++..+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~ 94 (417)
T PRK10489 17 PAFRAVFIARFISIFGLGLLGVAVPVQIQ-MMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGL 94 (417)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHH
Confidence 34445555666666666656666666654 6788999999999999999999999999999999 999999998888777
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
+.++++.....+. .+...+++.|++.|++.+...++..+++.|.+++++ |+++.+
T Consensus 95 ~~~~~~~~~~~~~-------------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 149 (417)
T PRK10489 95 GFIGLALNAFLPE-------------------PSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGA 149 (417)
T ss_pred HHHHHHHHHHcCC-------------------CcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHH
Confidence 7666543211011 236677888999999988888888899999999887 999999
Q ss_pred hhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccC-CCCCchhHHHHHHHHHHHhccccC
Q 008182 185 RFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKK-SSGSPIVHIFQVIVAAIKKRKMDL 263 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 263 (575)
+.+...++|..+||.+++.+.+..+|++.|++.++..+++.+..+..++ .+.++ +++++..+
T Consensus 150 ~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~---------------- 212 (417)
T PRK10489 150 ITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPA-LPPPPQPREHPLRS---------------- 212 (417)
T ss_pred HHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCC-CCCCCcccccchHH----------------
Confidence 9999999999999999999988889999998877766655554433321 11100 00000000
Q ss_pred CCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhcc
Q 008182 264 PCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQM 343 (575)
Q Consensus 264 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 343 (575)
..+.. +.....+.+...................
T Consensus 213 ------------------------~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 245 (417)
T PRK10489 213 ------------------------LLAGF----------------------RFLLASPVVGGIALLGGLLTMASAVRVL- 245 (417)
T ss_pred ------------------------HHHHH----------------------HHHHcChHHHHHHHHHHHHHHHHhHHHh-
Confidence 00000 0000001111111111111111111111
Q ss_pred cchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 008182 344 ITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALV 423 (575)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 423 (575)
...+..+..+.+. ...+.+.....+..++...+.+++ .+|. ++.+.+..+.++.+++++.+...
T Consensus 246 ~p~~~~~~~g~~~------~~~g~~~~~~~~g~~ig~~~~~~l----~~~~------~~~~~l~~~~~~~~~~~~~~~~~ 309 (417)
T PRK10489 246 YPALADEVWQMGA------AQIGLLYAAVPLGAALGALTSGWL----AHSA------RPGLLMLLSTLGSFLAVGLFGLM 309 (417)
T ss_pred hHHHHHhccCCCh------hHhHHHHHHHHHHHHHHHHHHHHh----hhcc------CcchHHHHHHHHHHHHHHHHHcc
Confidence 1111111111111 112223333444444444444433 3321 12233556666666666555432
Q ss_pred HHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 008182 424 ERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAV 503 (575)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~ 503 (575)
.+........++.|++.+...+...+++.+..|++.||+++|+++....+|..+|+.+.|.
T Consensus 310 -------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~ 370 (417)
T PRK10489 310 -------------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGG 370 (417)
T ss_pred -------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHH
Confidence 2233455667778888888788888899999999999999999999999999999999998
Q ss_pred hhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCcc
Q 008182 504 VKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYKPKKPKA 558 (575)
Q Consensus 504 v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~~~~~~~ 558 (575)
+.+..+ ....++..++..++..++.+...+++++.++++
T Consensus 371 l~~~~g----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (417)
T PRK10489 371 LGAMMT----------------PVASASASGFGLLIIGVLLLLVLGELRRFRQTP 409 (417)
T ss_pred HHHHhc----------------hhhHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 875332 123445555555554444545545555444443
No 17
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.92 E-value=3e-23 Score=215.55 Aligned_cols=358 Identities=13% Similarity=0.109 Sum_probs=235.0
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHH
Q 008182 29 LVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGM 108 (575)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l 108 (575)
.++...++..++.......+|.|.. +++.+..+.+++.+++.++..+++++.|+++||+ ||||+++++.++..++..+
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~ 80 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAV 80 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHH
Confidence 4556677777777777777888876 5799999999999999999999999999999999 9999999999988888887
Q ss_pred HHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhh
Q 008182 109 LAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFF 188 (575)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 188 (575)
.+++...+. .+.+.++++|++.|++.+...+...+++.|++|+++ |++.+++.+.
T Consensus 81 ~~~~~~~~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 135 (365)
T TIGR00900 81 LPFVALLGG-------------------LNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLSQA 135 (365)
T ss_pred HHHHHHcCC-------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHHHH
Confidence 777632111 247778999999999999999999999999999887 9999999999
Q ss_pred hHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchh-HHHHHHHHHHHhccccCCCCc
Q 008182 189 FISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIV-HIFQVIVAAIKKRKMDLPCNV 267 (575)
Q Consensus 189 ~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 267 (575)
+.++|..++|.+++++.+..+|++.|++.++..+++.+.....+.+.+.++++ .+.+ +..
T Consensus 136 ~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------------------ 196 (365)
T TIGR00900 136 VRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASEI-QALSNAVL------------------ 196 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCccc-cccchhHH------------------
Confidence 99999999999999999889999999987776665554444332211110000 0000 000
Q ss_pred cccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHH-HHHHHHHHHHhhhcccch
Q 008182 268 GMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLP-IWATTIIFWTTYAQMITF 346 (575)
Q Consensus 268 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~ 346 (575)
.+..+. + +...+.+.+..... .+................
T Consensus 197 ------------------~~~~~~-----------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (365)
T TIGR00900 197 ------------------RDTREG-----------------I-----KFVLKNPLLRTLLLLALLFNLVFAPAIVALFPY 236 (365)
T ss_pred ------------------HHHHhH-----------------H-----HHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 000000 0 00000111111111 111111111111111111
Q ss_pred hhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 008182 347 SVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERK 426 (575)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 426 (575)
+..+..+.+ ....+.+.....+..++...+.+++ .+|. ++.+.+..+..+.+++++......
T Consensus 237 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-- 298 (365)
T TIGR00900 237 VQSKYLGRG------STHYGWVLAAFGLGALLGALLLGLL----GRYF------KRMALMTGAIFVIGLAILVVGLTP-- 298 (365)
T ss_pred HHHHHhCCc------hHHHHHHHHHHHHHHHHHHHHHHHH----HHHh------chhHHHHHHHHHHHHHHHHHHhhc--
Confidence 211111111 1112223333444444444444433 3332 222334455555566555554331
Q ss_pred HHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008182 427 RLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKK 506 (575)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~ 506 (575)
+ +.+..++..++.+++.+...+...++..+..|++.||+++|+++....++..+++.+.+.+.+
T Consensus 299 ---------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 299 ---------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred ---------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 234456678888999999999999999999999999999999999999999999999998764
No 18
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.92 E-value=3.2e-23 Score=225.72 Aligned_cols=396 Identities=12% Similarity=0.071 Sum_probs=245.5
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
|..+..+++..++..+..-.+.+.+|.. .+++|.+..+.+|+.+.+.++..++.++.|+++||+ |||++++++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i-~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~ 82 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTL-SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 4556666777777766666666666655 568999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccC-CCCChHhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQF-DEKDEKEKTQMAYF 182 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~-~~~~~~~~~~r~~~ 182 (575)
++++++++++ +...++++|+++|+|.+...+.....+.+.+ ++++ |+++
T Consensus 83 ~~~~~~~~a~------------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~------r~~~ 132 (495)
T PRK14995 83 LASLAAAFSP------------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ------RNMA 132 (495)
T ss_pred HHHHHHHHcC------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH------HHHH
Confidence 9999999873 3777999999999999998888888787776 4455 9999
Q ss_pred hhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHH------HHHHH
Q 008182 183 FSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQV------IVAAI 256 (575)
Q Consensus 183 ~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 256 (575)
++++....++|..+||.+++++.+..+||+.|++...+.++.+++..+..|+.+.++.++.+....... ....+
T Consensus 133 ~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~ 212 (495)
T PRK14995 133 LGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSA 212 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999987776666555555444332222111121111100 00111
Q ss_pred HhccccCCCCccccccCCcccccccCCcchh-h----hhH-HhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHH
Q 008182 257 KKRKMDLPCNVGMLYEDTPEASRIHHTEQFH-F----LDK-AAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIW 330 (575)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 330 (575)
+.. .+ .......... . ... .....+. ....|.. ..+-.++ +.+.......
T Consensus 213 ~~~-~~---------------~~~~~~~~~~~~~~~~~~l~~f~~~e~-----~~~~p~~--~~~lf~~-~~~~~~~~~~ 268 (495)
T PRK14995 213 KTA-LK---------------GFLSLWVTSLTLLTGALLLGLFIRTQL-----AASRPMI--DMRLFTH-RIILSGVVMA 268 (495)
T ss_pred Hhc-cc---------------cCCchHHHHHHHHHHHHHHHHHHHHHh-----cCCCCCc--CHHHhCC-cccHHHHHHH
Confidence 110 00 0000000000 0 000 0000000 0111210 1111111 1111111111
Q ss_pred HHHHHHHHhhhcccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHH
Q 008182 331 ATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGL 410 (575)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~ 410 (575)
+.....+.........+.+...+.+ ....+.......+...+..++.+++.+|..+ .+.+..|.
T Consensus 269 ~~~~~~~~~~~~~~~~~lq~v~g~s------~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~----------~~~~~~g~ 332 (495)
T PRK14995 269 MTAMITLVGFELLMAQELQFVHGLS------PLEAGMFMLPVMVASGFSGPIAGILVSRLGL----------RLVATGGM 332 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc----------hHHHHHHH
Confidence 1111111111111111111111111 1112333344445555566666665443322 22356677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHH
Q 008182 411 VLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTL 490 (575)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~ 490 (575)
++.+++++.+..... ..+.+......++.|+|.++..+.....+.+.+|++.+|.+++++++.+
T Consensus 333 ~~~~~~~~~l~~~~~----------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 396 (495)
T PRK14995 333 ALSALSFYGLAMTDF----------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAY 396 (495)
T ss_pred HHHHHHHHHHHHhcC----------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHH
Confidence 777777665544311 1233344567888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhh
Q 008182 491 SLGFFVSSFLVAVVKKV 507 (575)
Q Consensus 491 ~lg~~lg~~l~~~v~~~ 507 (575)
.+|+.+|+.+.+.+.+.
T Consensus 397 ~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 397 ELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988653
No 19
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.92 E-value=1.7e-22 Score=213.63 Aligned_cols=179 Identities=14% Similarity=0.161 Sum_probs=151.7
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Q 008182 17 DPSKTGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIA 96 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~ 96 (575)
+...+..|+.+..+.+..++.....|.....++. +.+++|+++.+.++..+.+.++..+++++.|+++||+ ||||+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~ 89 (394)
T PRK10213 12 DAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVI 89 (394)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHH
Confidence 3344556776666666666666666655566665 4568999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhh
Q 008182 97 IFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEK 176 (575)
Q Consensus 97 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 176 (575)
++.++.+++.+++++++ +.+.+++.|+++|++.+...+...+++.|++|+++
T Consensus 90 ~~~~~~~~~~~~~~~~~------------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~---- 141 (394)
T PRK10213 90 LFAVLLTLSCLLVSFAN------------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT---- 141 (394)
T ss_pred HHHHHHHHHHHHHHHHC------------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH----
Confidence 99999999988887763 37779999999999999999999999999999888
Q ss_pred hhhhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHH
Q 008182 177 TQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIII 227 (575)
Q Consensus 177 ~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~ 227 (575)
|+++.++...+.++|..++|.+++++.+..+||+.|++.++..++..+.
T Consensus 142 --~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~ 190 (394)
T PRK10213 142 --VPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFW 190 (394)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999899999999877655544433
No 20
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.92 E-value=5.9e-23 Score=217.70 Aligned_cols=382 Identities=13% Similarity=0.079 Sum_probs=243.2
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchh-----hHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSAT-----SANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIF 98 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~ 98 (575)
.|.+..+++..++..++++...+.++.|++ ++|.+..+ .+++.+++.+...++.++.|+++||+ |||+++.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~ 90 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRS 90 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHH
Confidence 345667777888888888888888999886 58888655 48889999999999999999999999 999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhh
Q 008182 99 AAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQ 178 (575)
Q Consensus 99 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 178 (575)
.++..++.+++.+++ +.+.+++.|++.|++.+ ..+...+.+.|.+++++
T Consensus 91 ~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~------ 139 (408)
T PRK09874 91 ALGMGIVMVLMGLAQ------------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPRNK------ 139 (408)
T ss_pred HHHHHHHHHHHHHHh------------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh------
Confidence 988888888777653 36678899999999865 45777788899998888
Q ss_pred hhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHh
Q 008182 179 MAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKK 258 (575)
Q Consensus 179 r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (575)
|+++.++.....++|..++|.+++.+.+..+|++.|++.++..++..+...+..++.+...+++.+ .+
T Consensus 140 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------- 207 (408)
T PRK09874 140 SGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEM-LH----------- 207 (408)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhh-hH-----------
Confidence 999999999999999999999999998888999999988877666555444433321100000000 00
Q ss_pred ccccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 008182 259 RKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWT 338 (575)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 338 (575)
..+.... .++.+....... .......
T Consensus 208 -----------------------------~~~~~~~----------------------~~~~~~~~~~~~---~~~~~~~ 233 (408)
T PRK09874 208 -----------------------------MREVVTS----------------------LKNPKLVLSLFV---TTLIIQV 233 (408)
T ss_pred -----------------------------HHHHHHh----------------------CcCCchHHHHHH---HHHHHHH
Confidence 0000000 000011110111 1111111
Q ss_pred hhhcccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHH
Q 008182 339 TYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMA 418 (575)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~ 418 (575)
........+..................+.+..+..+..++..+..+++.+|+.+| +.+..+..+..++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~----------~~~~~~~~~~~~~~~ 303 (408)
T PRK09874 234 ATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE----------KILITALIFSVLLLI 303 (408)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----------hhHHHHHHHHHHHHH
Confidence 1111111111110000000000000011122233344445555555554433322 224455555555444
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHH
Q 008182 419 AAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSS 498 (575)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~ 498 (575)
..... .+.+.+.+..++.|++.+...|...+.+.+..|++.+|+.+++++....+|..+|+
T Consensus 304 ~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp 364 (408)
T PRK09874 304 PMSFV-------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGP 364 (408)
T ss_pred HHHHh-------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhH
Confidence 43322 12334555677889999999999998888999999999999999999999999999
Q ss_pred HHHHhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhh
Q 008182 499 FLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAV 549 (575)
Q Consensus 499 ~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~ 549 (575)
.+.+.+.+.. ++...|++.+++.+++.+..+...+
T Consensus 365 ~~~G~l~~~~----------------g~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 365 LMGAAISANY----------------GFRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred HHHHHHHhhc----------------chhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999875422 1356677788877777666555443
No 21
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.92 E-value=1.2e-22 Score=217.71 Aligned_cols=169 Identities=9% Similarity=-0.003 Sum_probs=141.3
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
.++..++..++..+..+.+...++.+ .+++|++..+.+++.+.+.++..++++++|+++||+ |||+++.++.++..++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~ 101 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEM-LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGII 101 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHH
Confidence 33444444555555445555556555 457999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
.++++++.+ ...+++.|++.|++.|...+...+++.|++++++ |++++++
T Consensus 102 ~~~~~~~~~------------------------~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~~~~ 151 (434)
T PRK11663 102 NILFGFSSS------------------------LWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGWWAI 151 (434)
T ss_pred HHHHHHHhH------------------------HHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHHHHH
Confidence 988887733 6668888999999999888889999999999888 9999999
Q ss_pred hhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHH
Q 008182 186 FFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAII 226 (575)
Q Consensus 186 ~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~ 226 (575)
++.+.++|..++|.+.+++.+..+||+.|++.++..++..+
T Consensus 152 ~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~ 192 (434)
T PRK11663 152 WNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGL 192 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999889999999987766554433
No 22
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.92 E-value=2.8e-22 Score=212.82 Aligned_cols=359 Identities=14% Similarity=0.095 Sum_probs=222.3
Q ss_pred CcchhHHHHHHHHHHHH---HHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHH
Q 008182 23 GWVPAALVLGIELCERL---STMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFA 99 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~ 99 (575)
+.+..+..+...+++.. +...+.+.++. +.+++|.+..+.++..+.+.+++.+++++.|+++||+ ||||+++++.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~ 85 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGV 85 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHH
Confidence 34444444444444433 44444455554 4578999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhh
Q 008182 100 AVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQM 179 (575)
Q Consensus 100 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 179 (575)
.+..++.+++.++. +...+++.|++.|++.+...+...+.+.|.+++++ |
T Consensus 86 ~~~~~~~~~~~~~~------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~ 135 (406)
T PRK15402 86 AFFILTCLAILLAQ------------------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------A 135 (406)
T ss_pred HHHHHHHHHHHHHc------------------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------H
Confidence 99998888887763 26668899999999999888888899999999887 8
Q ss_pred hhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhc
Q 008182 180 AYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKR 259 (575)
Q Consensus 180 ~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (575)
.+..++......+|..++|.+++++.+..+|++.|++.++..++..+......|+.+++++++.+..+..+
T Consensus 136 ~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 206 (406)
T PRK15402 136 IKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLKELGR--------- 206 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccHHHHHH---------
Confidence 88888888788899999999999998888999999987777666555444333322111100000000000
Q ss_pred cccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHh
Q 008182 260 KMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTT 339 (575)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 339 (575)
+.... .++++................ .
T Consensus 207 ------------------------------~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~-~ 233 (406)
T PRK15402 207 ------------------------------DYKLV----------------------LKNRRFVAGALALGLVSLPLL-A 233 (406)
T ss_pred ------------------------------HHHHH----------------------HcCcHHHHHHHHHHHHHHHHH-H
Confidence 00000 011111111111111111111 1
Q ss_pred hhcccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHH
Q 008182 340 YAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAA 419 (575)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~ 419 (575)
+......+..+..+.+.. ..+.......+..++..++.+++ .+|. +..+.+..+.++..++.+.
T Consensus 234 ~~~~~p~~~~~~~g~~~~------~~g~~~~~~~~~~~~g~~~~g~l----~~r~------~~~~~~~~~~~~~~~g~~~ 297 (406)
T PRK15402 234 WIALSPVILISGEQLSSY------EYGLLQVPVFGALIAGNLTLARL----TSRR------PLRSLIRMGLWPMVAGLLL 297 (406)
T ss_pred HHHHhHHHHHHHhCCCHH------HHHHHHHHHHHHHHHHHHHHHHH----HHhc------CHHHHHHHHHHHHHHHHHH
Confidence 111111111111111100 01111111222233333343443 3332 2333466677777777776
Q ss_pred HHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHH
Q 008182 420 AALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSF 499 (575)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~ 499 (575)
+...... ...+..+++...++.+++++...+..+..... .+++.||+..+++++.+.+|..+|+.
T Consensus 298 ~~~~~~~--------------~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~ 362 (406)
T PRK15402 298 AALATVI--------------SSHAYLWLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIE 362 (406)
T ss_pred HHHHHHc--------------ccccHHHHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHH
Confidence 6654211 02244556778888999998888777665543 34589999999999999999999999
Q ss_pred HHHhhhh
Q 008182 500 LVAVVKK 506 (575)
Q Consensus 500 l~~~v~~ 506 (575)
+.+.+.+
T Consensus 363 ~~~~l~~ 369 (406)
T PRK15402 363 LSKHAYL 369 (406)
T ss_pred HHHhccc
Confidence 9987753
No 23
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.92 E-value=3.6e-22 Score=223.12 Aligned_cols=156 Identities=17% Similarity=0.156 Sum_probs=132.8
Q ss_pred HHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCC
Q 008182 45 AVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCK 124 (575)
Q Consensus 45 ~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 124 (575)
...+.+++.+++|++..+.+++.+++.++..++++++|+++||+ |||+++++++++.+++.++++++++
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~s---------- 254 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQG---------- 254 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHhh----------
Confidence 44556677788999999999999999999999999999999999 9999999999999999888887733
Q ss_pred CcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhh
Q 008182 125 ETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYI 204 (575)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l 204 (575)
...++++|++.|+|.|+..+...++++|.+|++. |++.+++......+|.++++.++..+
T Consensus 255 --------------~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~la~~i 314 (742)
T TIGR01299 255 --------------YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAAMAWAI 314 (742)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778999999999999999999999999999888 99999999999999999998877655
Q ss_pred ccc-------------ccchhHHHHHHHHHHHHHHHHHhc
Q 008182 205 QDE-------------ISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 205 ~~~-------------~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
... .+||+.|++.++..++.++..++.
T Consensus 315 l~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~l 354 (742)
T TIGR01299 315 IPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFM 354 (742)
T ss_pred HHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHc
Confidence 432 358998888777666555554443
No 24
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.92 E-value=5.1e-23 Score=212.91 Aligned_cols=350 Identities=20% Similarity=0.258 Sum_probs=226.1
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHH
Q 008182 31 LGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLA 110 (575)
Q Consensus 31 ~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~ 110 (575)
++..++..+........++.++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.++.+++..++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 4556677777777777777688999999999999999999999999999999999998 999999999999999966665
Q ss_pred HHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhH
Q 008182 111 MVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFI 190 (575)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 190 (575)
+++ +.+.++++|++.|++.+...+...+++.|++++++ |++.+++.....
T Consensus 81 ~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~ 130 (352)
T PF07690_consen 81 FAS------------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAGF 130 (352)
T ss_dssp HHC------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHHH
T ss_pred hhh------------------------hHHHHhhhccccccccccccccccccccccchhhh------hhhccccccchh
Confidence 542 25579999999999999999999999999999988 999999999999
Q ss_pred HHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCCCCcccc
Q 008182 191 SLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGML 270 (575)
Q Consensus 191 ~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (575)
++|..++|.+++++.+..+|++.|++.++..++..++.....++.+.+++++++.++
T Consensus 131 ~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~----------------------- 187 (352)
T PF07690_consen 131 SLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKES----------------------- 187 (352)
T ss_dssp HHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTT-----------------------
T ss_pred hhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhccccccccccccc-----------------------
Confidence 999999999999999889999999999888877766533333221111111000000
Q ss_pred ccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHH-HHHHHhhhcccchhhh
Q 008182 271 YEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATT-IIFWTTYAQMITFSVE 349 (575)
Q Consensus 271 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~ 349 (575)
. ...+ .+++. ..+...+.+.+.......... ..+... ......+..
T Consensus 188 -------~---~~~~---------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ 234 (352)
T PF07690_consen 188 -------E---SKKP---------------------KPLKP-GFKSLFKNPVLWILLIAFFLFFFVFSGF-SFFLPLYLQ 234 (352)
T ss_dssp -------T-----HH---------------------HCCCH--CTHHHHHHCCHHHHHHHHHHHHHHHHH-HHHHHHHCC
T ss_pred -------c---cccc---------------------ccccc-ccccccccchhhhhhhhhhHHHHHHHHh-hcccchhhh
Confidence 0 0000 00000 001111222111111111111 111111 111111111
Q ss_pred hhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008182 350 QATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLS 429 (575)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 429 (575)
+..+.+ . ....+.+..+..+...+..++.+++.+|+.+ .+..........++.+.+.....
T Consensus 235 ~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~---- 295 (352)
T PF07690_consen 235 EVLGFS-G----PSQAGLLFSIFGIVGIIGSLLAGRLSDRFGR----------RRRLLIAILLLILGALGLLLLPF---- 295 (352)
T ss_dssp HHHHCC-T----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHCCSHH----
T ss_pred hccCCC-H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc----------HHHHHHHHHHHHHHHHHHHHHHH----
Confidence 111111 0 0112223344444555555555555443222 12233333333333333332211
Q ss_pred HHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHH
Q 008182 430 VARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSS 498 (575)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~ 498 (575)
..+..+.+...++.|++.+...+...+++.+.+|++.||+++|+.++..++|..++|
T Consensus 296 ------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 296 ------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp ------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 123345666788899999999999999999999999999999999999999999886
No 25
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.91 E-value=2e-22 Score=211.10 Aligned_cols=157 Identities=20% Similarity=0.195 Sum_probs=138.8
Q ss_pred HHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 008182 46 VNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKE 125 (575)
Q Consensus 46 ~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 125 (575)
....+++.+++|++..+.+++.+++.++..++.++.|+++||+ |||+++.++.++..++.++++++.
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 80 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG------------ 80 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc------------
Confidence 4455668889999999999999999999999999999999999 999999999999999988888773
Q ss_pred cCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhc
Q 008182 126 TATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ 205 (575)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~ 205 (575)
+.+.++++|++.|++.+...+....++.|.+|+++ |++.+++.....++|..+++.+++++.
T Consensus 81 ------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~ 142 (399)
T TIGR00893 81 ------------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVGWIL 142 (399)
T ss_pred ------------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 37779999999999999999999999999999888 999999999999999999999999998
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 206 DEISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 206 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
+..+|++.|++.++..++..+...+..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (399)
T TIGR00893 143 IHFSWQWAFIIEGVLGIIWGVLWLKFIP 170 (399)
T ss_pred HhCCchHHHHHHHHHHHHHHHHhhheec
Confidence 8899999999887776665555444333
No 26
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.91 E-value=2e-22 Score=218.46 Aligned_cols=156 Identities=13% Similarity=0.064 Sum_probs=125.5
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCcc
Q 008182 56 MHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQAS 135 (575)
Q Consensus 56 l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (575)
++.+..+.+++.+++.++..++++++|+++||+ ||||+++++.+++.++.++++++...-. .-..++
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~------------~~~~~~ 116 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFT------------SIGPDN 116 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhccccc------------cccccc
Confidence 388999999999999999999999999999999 9999999999999888877765411000 000112
Q ss_pred chhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhc--------cc
Q 008182 136 GFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ--------DE 207 (575)
Q Consensus 136 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~--------~~ 207 (575)
......++++|+++|++.|...+...++++|++|+++ |++++++...+..+|..+++.+++.+. +.
T Consensus 117 ~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 190 (479)
T PRK10077 117 TGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNT 190 (479)
T ss_pred hhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccc
Confidence 2335678899999999999999999999999999998 999999999999999999887765443 35
Q ss_pred ccchhHHHHHHHHHHHHHHHHHh
Q 008182 208 ISRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 208 ~~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
.+||++|++.++..++..+..++
T Consensus 191 ~gWr~~f~~~~~~~~~~~~~~~~ 213 (479)
T PRK10077 191 DGWRYMFASEAIPALLFLMLLYF 213 (479)
T ss_pred CChHHHHHHHHHHHHHHHHHHHc
Confidence 68999999877766665544433
No 27
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.91 E-value=9.3e-23 Score=220.58 Aligned_cols=181 Identities=13% Similarity=-0.018 Sum_probs=140.3
Q ss_pred chhHHHHHHHHHHHHHHHhhH---HHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIA---VNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~---~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
|..+.++...++..+..|... ....+.+.+++|++..+.+++.+.+.+++.++++++|+++||+ |||+++.+++++
T Consensus 25 ~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~ 103 (467)
T PRK09556 25 KPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLIL 103 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHH
Confidence 334444544444444444322 2335567889999999999999999999999999999999999 999999999888
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 102 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
.+++.++.++..... ..+...+++.|++.|++.+...|...++++|++|+++ |++
T Consensus 104 ~~~~~~~~~~~~~~~-------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~ 158 (467)
T PRK09556 104 SAICMLGFGASLGSG-------------------SVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGR 158 (467)
T ss_pred HHHHHHHHHHHHhcc-------------------cchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eee
Confidence 888776666531100 0247789999999999999999999999999999999 999
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhcccc---cchhHHHHHHHHHHHHHHHHHhc
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQDEI---SRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~~~---~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
+++++..+.++|..+++.+..++.+.. +|+..|.+.++..++..+..++.
T Consensus 159 a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 159 FLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred eEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998887765543 58988888776655544444433
No 28
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.91 E-value=2.6e-22 Score=216.03 Aligned_cols=146 Identities=18% Similarity=0.283 Sum_probs=125.3
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccch
Q 008182 58 LPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGF 137 (575)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (575)
.+..+.+++.+++.++..++++++|+++||+ |||++++++.++..++.+++.+..+. .
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~~---------------------~ 125 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAFA---------------------L 125 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhccc---------------------c
Confidence 3389999999999999999999999999999 99999999999999998888665321 1
Q ss_pred hhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHH---hhhcccccchhHH
Q 008182 138 QMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL---VYIQDEISRSVGY 214 (575)
Q Consensus 138 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~---~~l~~~~~~~~~f 214 (575)
+.+.++++|+++|+|.+...+...++++|++++++ |++++++.+.+.++|..+++.++ +...+..+||+.|
T Consensus 126 ~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f 199 (481)
T TIGR00879 126 SVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPL 199 (481)
T ss_pred chHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHH
Confidence 25578999999999999999999999999999998 99999999999999999999998 7776778999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 008182 215 GICSVAMFMAIIIFLAG 231 (575)
Q Consensus 215 ~~~~~~~~~~~~~~~~~ 231 (575)
++.++..++.++..++.
T Consensus 200 ~~~~~~~~~~~~~~~~l 216 (481)
T TIGR00879 200 GLQLIPAGLLFLGLFFL 216 (481)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99666555554444443
No 29
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.91 E-value=1.2e-22 Score=216.93 Aligned_cols=166 Identities=13% Similarity=0.146 Sum_probs=144.2
Q ss_pred CcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 008182 23 GWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQ 102 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 102 (575)
+++.+....+..+++.+..+.. .+..+++.+++|+++.+.+++.+++.++..+++++.|+++||+ |||+++.++.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~ 93 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 3555666666666766666554 4455667889999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 103 TLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
+++.++++++. +...++++|++.|++.+...+....++.|.+|+++ |+++
T Consensus 94 ~~~~~~~~~~~------------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r~~~ 143 (426)
T PRK12307 94 SVGTGLSGLAS------------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------KSKA 143 (426)
T ss_pred HHHHHHHHHHh------------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------hhHh
Confidence 99998888873 36778999999999999999999999999999988 9999
Q ss_pred hhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHH
Q 008182 183 FSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVA 220 (575)
Q Consensus 183 ~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~ 220 (575)
.++...+.++|..+++.+.+.+.+..+|++.|++....
T Consensus 144 ~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 144 SAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred hhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 99999999999999999999998889999999875443
No 30
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.91 E-value=1.1e-21 Score=210.23 Aligned_cols=175 Identities=17% Similarity=0.160 Sum_probs=129.7
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCC---CCchhhHHHHH---HHHHHHHHHHHHHHHHhhcccchHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMH---LPSATSANIVT---DFMGTSFLLCLLGGFLADTFLGRYKTIAIFA 99 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~---~~~~~~~~~~~---~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~ 99 (575)
.+....+..+++.+.... ...+.+++.++++ .+..+.+.+.+ ..+++..++++++|+++||+ ||||++.++.
T Consensus 23 ~~~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~ 100 (432)
T PRK10406 23 AIVGASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISV 100 (432)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHH
Confidence 343444445666665544 5667778888874 45554444444 44455559999999999999 9999999999
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhh
Q 008182 100 AVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQM 179 (575)
Q Consensus 100 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 179 (575)
+++++++++++++++... ........+++.|+++|+|.|...|...++++|++|+++ |
T Consensus 101 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------r 158 (432)
T PRK10406 101 CMMCFGSLVIACLPGYET----------------IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------K 158 (432)
T ss_pred HHHHHHHHHHhhcCCchh----------------HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------c
Confidence 999999999988743210 000123468899999999999999999999999999988 9
Q ss_pred hhhhhhhhhhHHHhHHHHHHHHhhhc--------ccccchhHHHHHHHHHHHH
Q 008182 180 AYFFSRFFFFISLGTLMAVTVLVYIQ--------DEISRSVGYGICSVAMFMA 224 (575)
Q Consensus 180 ~~~~~~~~~~~~ig~~l~~~i~~~l~--------~~~~~~~~f~~~~~~~~~~ 224 (575)
++..++.+...+.|..+++.+...+. +.+|||++|++.++..++.
T Consensus 159 g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 159 GFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 99999888888888888877655543 2579999999877655443
No 31
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.91 E-value=3.8e-22 Score=212.24 Aligned_cols=180 Identities=11% Similarity=0.008 Sum_probs=150.4
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 22 GGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
.+|+.++.+++..+++......+ ....+.+++++|++..+.+++.+++.+++.+++++.|+++||+ |||+++.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~ 82 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINI-GFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVL 82 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhH-HHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHH
Confidence 35666666666666665555544 4445588999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 102 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
..++.++++++++ ...++++|++.|++.+...|....+++|++|+++ |++
T Consensus 83 ~~~~~~~~~~~~~------------------------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------rg~ 132 (412)
T TIGR02332 83 WGIASTATMFATG------------------------PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------RAR 132 (412)
T ss_pred HHHHHHHHHHhcC------------------------HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------HHH
Confidence 9999999988733 6678999999999999998988899999999888 999
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhcc------cccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQD------EISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~------~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
.+++++...++|..+++.+++++.+ ..|||+.|++.++..++..++..+..|
T Consensus 133 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~ 190 (412)
T TIGR02332 133 ANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLD 190 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999999998863 368999999977766554444433333
No 32
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.91 E-value=3.5e-22 Score=210.98 Aligned_cols=176 Identities=15% Similarity=0.192 Sum_probs=151.0
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH
Q 008182 19 SKTGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIF 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~ 98 (575)
..+.+|+.+....+..+++.+..+.+....+ .+.+++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~ 83 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTS 83 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHH
Confidence 4456778788888888888887776655554 56778999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhh
Q 008182 99 AAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQ 178 (575)
Q Consensus 99 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 178 (575)
.++..++.+++++++ +...+++.|++.|++.+...+...+++.|++++++
T Consensus 84 ~~~~~~~~~~~~~~~------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------ 133 (405)
T TIGR00891 84 IVLFSAGTLACGFAP------------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------ 133 (405)
T ss_pred HHHHHHHHHHHHHhc------------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------
Confidence 999999988887763 26678899999999999999999999999999988
Q ss_pred hhhhhhhhhhhHHHhHHHHHHHHhhhccccc--chhHHHHHHHHHHHHHH
Q 008182 179 MAYFFSRFFFFISLGTLMAVTVLVYIQDEIS--RSVGYGICSVAMFMAII 226 (575)
Q Consensus 179 r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~--~~~~f~~~~~~~~~~~~ 226 (575)
|++++++.....++|..+++.+.+.+.+..+ |++.|++.++..++.++
T Consensus 134 ~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~ 183 (405)
T TIGR00891 134 RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALW 183 (405)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999887666 99999876655444433
No 33
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.91 E-value=5.9e-22 Score=209.53 Aligned_cols=365 Identities=13% Similarity=0.090 Sum_probs=229.2
Q ss_pred HHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhh
Q 008182 35 LCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTK 114 (575)
Q Consensus 35 ~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~ 114 (575)
...+..++.+.+.+| .+.+++|+|..+.+++.+.+.++..+++++.|+++||+ |||+++..++.+.+++.++++++++
T Consensus 19 ~~~~~~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~~ 96 (393)
T PRK09705 19 LNMRPLLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYPQ 96 (393)
T ss_pred HHcchhhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCcc
Confidence 333334444544454 56779999999999999999999999999999999999 9999999999999999999998843
Q ss_pred hcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhH
Q 008182 115 LRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGT 194 (575)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 194 (575)
+..++++|+++|+|.+...+....++.++++ ++ |+++++.+..+.+.|.
T Consensus 97 ------------------------~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~ 145 (393)
T PRK09705 97 ------------------------SALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMGGG 145 (393)
T ss_pred ------------------------hHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHHHH
Confidence 6668899999999999988998999999986 66 8999999999999999
Q ss_pred HHHHHHHhhhcccc-cchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCCCCccccccC
Q 008182 195 LMAVTVLVYIQDEI-SRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYED 273 (575)
Q Consensus 195 ~l~~~i~~~l~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (575)
.+++.+++++.++. +||..+.+.++..++.+...+...++.+++++++ +
T Consensus 146 ~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------------------- 195 (393)
T PRK09705 146 GLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSHKT-T----------------------------- 195 (393)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCC-C-----------------------------
Confidence 99999999988775 7998876655444433333322221111000000 0
Q ss_pred CcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhcc
Q 008182 274 TPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATT 353 (575)
Q Consensus 274 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (575)
. .+. + ..++.+.....+........++....+.+..+ .+ .+
T Consensus 196 ---------~-----------------------~~~---~--~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l-~~-~g 236 (393)
T PRK09705 196 ---------T-----------------------TPV---R--VVFTPRAWTLGVYFGLINGGYASLIAWLPAFY-IE-IG 236 (393)
T ss_pred ---------c-----------------------CCc---c--cccCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-cC
Confidence 0 000 0 00011111111112222222222222222222 11 11
Q ss_pred cccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008182 354 MERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARA 433 (575)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 433 (575)
.+.. ..+....+..+..++...+.+++ .+|.. +.+.+..+..+..++.+.+...
T Consensus 237 ~s~~------~ag~~~~~~~i~~i~g~~~~g~l----~~r~~------~~~~~~~~~~l~~~~~~~~~~~---------- 290 (393)
T PRK09705 237 ASAQ------YSGSLLALMTLGQAAGALLMPAM----ARHQD------RRKLLMLALVLQLVGFCGFIWL---------- 290 (393)
T ss_pred CChh------hhhHHHHHHHHHHHHHHHHHHHH----Hhhcc------chHHHHHHHHHHHHHHHHHHHc----------
Confidence 1111 12233344444455555444444 44322 2233555666666665544322
Q ss_pred hCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCC-cchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 008182 434 VGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSP-KGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKG 512 (575)
Q Consensus 434 ~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P-~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~ 512 (575)
+.+...+ ..++.+++.+...|.......+..| ++.+|+.+|+.+....++..+++.+.+.+.+..+
T Consensus 291 --------~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g--- 357 (393)
T PRK09705 291 --------PLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG--- 357 (393)
T ss_pred --------cchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---
Confidence 1111111 2344567777777777666666664 6789999999999999999999999998876432
Q ss_pred CCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhhhcC
Q 008182 513 GGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYK 552 (575)
Q Consensus 513 ~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~ 552 (575)
.+...|.+.++..++..++.+.+.++++
T Consensus 358 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 358 ------------NYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 1245566666666666666666655543
No 34
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=8.9e-23 Score=206.28 Aligned_cols=408 Identities=14% Similarity=0.046 Sum_probs=256.5
Q ss_pred CCCcchhHHHHHHHHHHHHHHHhhHH---HHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHH
Q 008182 21 TGGWVPAALVLGIELCERLSTMGIAV---NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAI 97 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~ 97 (575)
+.++|--+.+++..+....++|.+.- ...+++.++.++|.+|.|++.+++++++.++..+.|.++||. +.|+.+-+
T Consensus 21 ~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~ 99 (448)
T COG2271 21 KTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehH
Confidence 33445556677777788888887753 355789999999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhh
Q 008182 98 FAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKT 177 (575)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 177 (575)
++++.++..++++++++ ...+.+..++.|...|.-.|.+...++.+|++++
T Consensus 100 gLilsai~nil~Gfs~s------------------------~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e----- 150 (448)
T COG2271 100 GLILSAIVNILFGFSPS------------------------LFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE----- 150 (448)
T ss_pred HHHHHHHHHHHHhhhhH------------------------HHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc-----
Confidence 99999999999999854 6667788888999999999999999999999999
Q ss_pred hhhhhhhhhhhhHHHhHHHHHHHH--hhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHH
Q 008182 178 QMAYFFSRFFFFISLGTLMAVTVL--VYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAA 255 (575)
Q Consensus 178 ~r~~~~~~~~~~~~ig~~l~~~i~--~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (575)
||+..++.+.+.|+|+++.|.+. +++..+.+||..|++++++.++..+..++..+..+++..- .+.++.
T Consensus 151 -RG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GL-P~ie~~------- 221 (448)
T COG2271 151 -RGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGL-PPIEEY------- 221 (448)
T ss_pred -cCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCC-CCHHHh-------
Confidence 99999999999999999999999 9999989999999999988776555554443322211110 111110
Q ss_pred HHhccccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHH
Q 008182 256 IKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTII 335 (575)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 335 (575)
+. ++...++. .. ..+..+. |+.+ .+.+...|.+..+...-++.-+
T Consensus 222 ----~~----d~~e~~~~-----~~-~~~~ls~--------------------~~i~-~~YVL~Nk~iW~la~a~vfvYi 266 (448)
T COG2271 222 ----RG----DPLEIYEE-----EK-ENEGLTA--------------------WQIF-VKYVLKNKLIWLLALANVFVYV 266 (448)
T ss_pred ----hc----Cchhhhhh-----hc-cCCCccH--------------------HHHH-HHHHHcChHHHHHHHHHHHHHH
Confidence 00 00000000 00 0000000 1100 0111112222222111111111
Q ss_pred HHHhhhcccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHH
Q 008182 336 FWTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIV 415 (575)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~ 415 (575)
.-.....+...|..+..+.+.. .......+.-...+....+.++++|++.+.++. +. ..+..+...+
T Consensus 267 vR~gi~dW~p~YL~e~k~~s~~------~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~-----p~--~~i~~~~i~~ 333 (448)
T COG2271 267 VRYGINDWGPLYLSEVKGFSLV------KANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG-----PM--ALIFMLLITA 333 (448)
T ss_pred HHHHHhhhHHHHHHHhcCCCHH------HHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc-----hH--HHHHHHHHHH
Confidence 1111233334454544444433 223334445556666666778888777754221 11 1222222233
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhh--hhheecccCCcchhHHHHHHHHHHHHH-
Q 008182 416 GMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTG--QLDFFITKSPKGMKTMSTGLFLTTLSL- 492 (575)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~--~~~~~~~~~P~~~rg~~~g~~~~~~~l- 492 (575)
+++.+-..+ ..+.... ..++..+|.....|- .-..+.|.+|++..|++.|+..++..+
T Consensus 334 ~~~~~w~~~-----------------~~~~~l~--~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~ 394 (448)
T COG2271 334 SLVLYWLAP-----------------NGSYLLD--AILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLI 394 (448)
T ss_pred HHHHHHcCC-----------------CccHHHH--HHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHh
Confidence 333332210 1122223 333333444443333 223456899999999999999999988
Q ss_pred HHHHHHHHHHhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhhh
Q 008182 493 GFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVW 550 (575)
Q Consensus 493 g~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~ 550 (575)
|..++.+..+++.+. -+| ...|+++.+.++++.+.+....+.
T Consensus 395 Ga~~a~~~~g~i~d~------~gW----------~g~Fi~~~~~a~l~~lll~~~~~~ 436 (448)
T COG2271 395 GAALAGLPLGYIADT------WGW----------DGGFIVLSIAALLAILLLLPVWNA 436 (448)
T ss_pred hHHhcCCcceeeEec------CCC----------cchHHHHHHHHHHHHHHHHHHHhh
Confidence 888888888877543 256 455677777777776666555443
No 35
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.91 E-value=7.9e-22 Score=206.44 Aligned_cols=172 Identities=12% Similarity=0.038 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHH-HHHHHHHHHHHH
Q 008182 31 LGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAI-FAAVQTLGTGML 109 (575)
Q Consensus 31 ~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~-~~~~~~~~~~l~ 109 (575)
++..++..++.....+.++.|+.+++|.+..+.+++.+.+.+...+.+++.|+++||+ ||||.+++ +..+..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 4557778888888889999999999999999999999999999999999999999999 99887655 455555666666
Q ss_pred HHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh--hhhhh
Q 008182 110 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF--FSRFF 187 (575)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~ 187 (575)
++++ +...+++.|++++.+.+...|...++..|..++++ |... .+...
T Consensus 82 ~~~~------------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~ 131 (375)
T TIGR00899 82 AWNR------------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSSVMR 131 (375)
T ss_pred Hhcc------------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHHHHH
Confidence 6652 25667788888887777777887888888776655 5543 57777
Q ss_pred hhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 188 FFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 188 ~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
...++|..++|.+++++.+..+||++|++.++..++..+..++..|
T Consensus 132 ~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 177 (375)
T TIGR00899 132 AQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLP 177 (375)
T ss_pred HHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7889999999999999998899999999988776665555444333
No 36
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.91 E-value=7.8e-22 Score=206.29 Aligned_cols=156 Identities=15% Similarity=0.085 Sum_probs=123.1
Q ss_pred HHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 008182 46 VNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKE 125 (575)
Q Consensus 46 ~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 125 (575)
....+.+.+++|++..+.+++.+.+.+++.+++++.|+++||+ |||+++..++.....+.. .... .+
T Consensus 11 ~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~--~~--------- 77 (368)
T TIGR00903 11 SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLD--PF--------- 77 (368)
T ss_pred HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHH--hc---------
Confidence 3344555778999999999999999999999999999999999 999887665554444332 2222 01
Q ss_pred cCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhc
Q 008182 126 TATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ 205 (575)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~ 205 (575)
+...+++.|+++|+|.+.. +.....++|++|+++ |++++++...+.++|..+++.+++++.
T Consensus 78 ------------~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~~~~~l~ 138 (368)
T TIGR00903 78 ------------NYEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALAAGLKIY 138 (368)
T ss_pred ------------cHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3778999999999999864 455555689999887 999999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 206 DEISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 206 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
+..|||+.|++.++..++..++.++..|
T Consensus 139 ~~~gWr~~f~~~~~l~~~~~~~~~~~lp 166 (368)
T TIGR00903 139 TAGGLQLLIIPIAAVAAAGIILVLAALP 166 (368)
T ss_pred HccchHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999877665555444444333
No 37
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.91 E-value=2e-22 Score=217.12 Aligned_cols=352 Identities=10% Similarity=-0.005 Sum_probs=211.1
Q ss_pred HHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCc
Q 008182 49 VTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETAT 128 (575)
Q Consensus 49 ~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 128 (575)
.+.+.+++|.+.++.+++.+.+.++..++.+++|+++||+ |||++++.+.++..++.++++++++
T Consensus 42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------- 106 (455)
T TIGR00892 42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSSN-------------- 106 (455)
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhhh--------------
Confidence 3455678999999999999999999999999999999999 9999999999999999888887733
Q ss_pred ccccCccchhhHHHH-HHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhccc
Q 008182 129 HTCEQASGFQMGVLY-IALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDE 207 (575)
Q Consensus 129 ~~~~~~~~~~~~~~~-~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~ 207 (575)
...++ ..|++.|++.+...+...+++.++++ ++ |+++.++.+.+.++|..++|.+++++.+.
T Consensus 107 ----------~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~l~~~ 169 (455)
T TIGR00892 107 ----------VIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQYLFES 169 (455)
T ss_pred ----------HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 44454 45688899988766666777888885 56 99999999999999999999999999998
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCCCCccccccCCcccccccCCcchh
Q 008182 208 ISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFH 287 (575)
Q Consensus 208 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 287 (575)
.|||++|++.++..+++.+..++.++..+.++..+.+.. +...++.. . +........+
T Consensus 170 ~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~-------~--~~~~~~~~~~ 227 (455)
T TIGR00892 170 FGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSK-------------EGLPPDGS-------T--KKLSKKSTAE 227 (455)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHhCCCCccccccccccc-------------ccCCCCCc-------c--ccccccchhh
Confidence 999999999888766655554444332111000000000 00000000 0 0000000000
Q ss_pred hhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhcccccccccccccccc
Q 008182 288 FLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPAGS 367 (575)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (575)
. ..++. ..+-.++ +.+...+. ...+....+......+.........+ ....+.
T Consensus 228 ~-----------------~~~~~--~~~~~~~-~~~~~~~~---~~~l~~~~~~~~~~~l~~~~~~~g~s----~~~~g~ 280 (455)
T TIGR00892 228 K-----------------INRFL--DFSLFTH-RGFLVYLS---GNVIMFLGFFAPIIFLVPYAKDKGVD----EYEAAF 280 (455)
T ss_pred h-----------------hhhhc--chHHhcC-chHHHHHH---HHHHHHHHccchHHHHHHHHHHcCCC----HHHHHH
Confidence 0 00000 0000111 11111111 11111111111111111111111111 111223
Q ss_pred cccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehh
Q 008182 368 LTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFL 447 (575)
Q Consensus 368 ~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (575)
+..+..+..++..++.+++.++ ... +......+..+.++.+++++..... .+.++
T Consensus 281 ~~~~~~~~~~~~~~~~g~l~d~----~~~--~~~~~~~~~~~~~~~~l~~ll~~~~-------------------~~~~~ 335 (455)
T TIGR00892 281 LLSIIGFVDIFARPSCGLIAGL----KWI--RPHVQYLFSFALLFNGLTHLLCALA-------------------GDYTG 335 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc----ccc--CHHHHHHHHHHHHHHHHHHHHHHHh-------------------chHHH
Confidence 3444555555666666655432 111 0111122233333333433333221 23345
Q ss_pred hHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008182 448 LIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKK 506 (575)
Q Consensus 448 li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~ 506 (575)
++...++.|++.+...+...+++.+.+|++.+|+++|+++....+|..+|+.+.+.+.+
T Consensus 336 ~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 394 (455)
T TIGR00892 336 LVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVD 394 (455)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeeh
Confidence 56678888899888889999999999999999999999999999999999999997754
No 38
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.91 E-value=1.4e-22 Score=220.05 Aligned_cols=398 Identities=13% Similarity=0.122 Sum_probs=242.6
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
.+..+++..+...+........ .+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.+++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~ 80 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVA-IPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 3444555555555555444444 4556678999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
.+++++++ +...++++|+++|++.+...+...+++.|.+|+++ |++++++
T Consensus 81 ~~~~~~~~------------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~ 130 (485)
T TIGR00711 81 SLLCGVAP------------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAMAI 130 (485)
T ss_pred HHHHhCcC------------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHHHH
Confidence 99888763 36778999999999999999999999999999888 9999999
Q ss_pred hhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHH--HHHHHHHhccccC
Q 008182 186 FFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQ--VIVAAIKKRKMDL 263 (575)
Q Consensus 186 ~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 263 (575)
+.....+|..++|.+++++.+..+|++.|++.+...++..+...+..++.++++.++.+...... .............
T Consensus 131 ~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~ 210 (485)
T TIGR00711 131 WGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEG 210 (485)
T ss_pred HHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999988776666555544443332211111111111000 0000000000000
Q ss_pred CCCccccccCCcccccccCCcchhhhh--H-----HhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHH
Q 008182 264 PCNVGMLYEDTPEASRIHHTEQFHFLD--K-----AAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIF 336 (575)
Q Consensus 264 ~~~~~~~~~~~~~~~~i~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 336 (575)
+ . ......++..... . .....+. ..+.|.. ..+..++++.....+..+.....+
T Consensus 211 ~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 271 (485)
T TIGR00711 211 P-E-----------RGWFDSNEILILSITGLVAIIAFVVWEL-----TDDNPLV--DLRLFKYRNFTIGCVYMSLLGLGL 271 (485)
T ss_pred C-C-----------CCCCCchHHHHHHHHHHHHHHHHHHHHH-----cCCCCcc--CHHHHcCCChHHHHHHHHHHHHHH
Confidence 0 0 0000000000000 0 0000000 0011110 011111111111121222222222
Q ss_pred HHhhhcccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHH
Q 008182 337 WTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVG 416 (575)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~ 416 (575)
+......+ .+..+..+.+ ....+.......+..++..++.+++.+|..+ .+.+..|..+.+++
T Consensus 272 ~~~~~~~p-~~~~~~~g~s------~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~----------~~~~~~g~~~~~~~ 334 (485)
T TIGR00711 272 YGSFYLLP-LYLQQVLGYT------ALQAGLHILPVGLAPMLSSPIAGRMGDKIDP----------RKLVTIGLILYAVG 334 (485)
T ss_pred HHHHHHHH-HHHHHhcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc----------HHHHHHHHHHHHHH
Confidence 21111111 1111111111 1112333444555566666666665433322 23366677777777
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHH
Q 008182 417 MAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFV 496 (575)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l 496 (575)
..++..... +..+...++...++.|+|.++..+.......+..|++.+|+++|++++.+.+|+.+
T Consensus 335 ~~~~~~~~~---------------~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~i 399 (485)
T TIGR00711 335 FYWRAFTFT---------------PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSI 399 (485)
T ss_pred HHHHhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHH
Confidence 666552100 02233445666888999999988888888888899999999999999999999999
Q ss_pred HHHHHHhhhh
Q 008182 497 SSFLVAVVKK 506 (575)
Q Consensus 497 g~~l~~~v~~ 506 (575)
|+.+.+.+.+
T Consensus 400 g~~i~g~~~~ 409 (485)
T TIGR00711 400 GTALITTILT 409 (485)
T ss_pred HHHHHHHHHH
Confidence 9999998765
No 39
>PRK09952 shikimate transporter; Provisional
Probab=99.91 E-value=1.9e-21 Score=208.49 Aligned_cols=180 Identities=9% Similarity=0.101 Sum_probs=133.2
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcC--CCCchhhHHHH-----HHHHHHHHHHHHHHHHHhhcccchH
Q 008182 20 KTGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTM--HLPSATSANIV-----TDFMGTSFLLCLLGGFLADTFLGRY 92 (575)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l--~~~~~~~~~~~-----~~~~~~~~~~~~~~G~laDr~~Gr~ 92 (575)
...++|.++..++..+++.+....+....+.++.+++ +.++.+ +++. ++.+++..+++++.|+++||+ |||
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr 94 (438)
T PRK09952 17 LSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRK 94 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccH
Confidence 3444566667777777777766655444555666555 666663 4443 234555678888999999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCC
Q 008182 93 KTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKD 172 (575)
Q Consensus 93 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 172 (575)
+++.++.+++++++++++++++..... ......+++.|+++|++.|...+....++.|++|+++
T Consensus 95 ~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~ 158 (438)
T PRK09952 95 RMLMLTVWMMGIATALIGLLPSFSTIG----------------WWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK 158 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHH----------------HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC
Confidence 999999999999999999884422100 0012257889999999999999999999999999998
Q ss_pred hHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhc--------ccccchhHHHHHHHHHHH
Q 008182 173 EKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ--------DEISRSVGYGICSVAMFM 223 (575)
Q Consensus 173 ~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~--------~~~~~~~~f~~~~~~~~~ 223 (575)
|+...+....+..+|..++..+..++. +.+|||.+|++.++..++
T Consensus 159 ------rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 159 ------KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred ------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence 999988888888888888877666554 247999999987665433
No 40
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.90 E-value=2.8e-22 Score=209.14 Aligned_cols=354 Identities=11% Similarity=0.031 Sum_probs=221.1
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
|+.+...+...++... .|. ...+.+++.+++|++..+.+++.+++.++..+++++.|+++||+ |||+++.++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~ 79 (377)
T TIGR00890 3 WYVLVGTVIMCFTSGY-VYT-WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYG 79 (377)
T ss_pred EEEeHHHHHHHHHhhH-Hhh-hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHH
Confidence 3444444433333332 443 34566778889999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
++.++++++++ ...++++|++.|++.+...+.....+.++++ ++ |+++.
T Consensus 80 ~~~~~~~~~~~------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~ 128 (377)
T TIGR00890 80 LGFTFYAIADS------------------------LAALYLTYGLASAGVGIAYGIALNTAVKWFP-DK------RGLAS 128 (377)
T ss_pred HHHHHHHHHHH------------------------HHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cc------cHHHH
Confidence 99998888743 6778899999999999877777788888886 45 89999
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccC
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDL 263 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (575)
++.....++|..+++.+.+.+.+..+||+.|++.++..++..+..++..++.++++.++.. .
T Consensus 129 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------- 190 (377)
T TIGR00890 129 GIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNI-E----------------- 190 (377)
T ss_pred HHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCc-c-----------------
Confidence 9999999999887766777777778999999988877666555544433221110000000 0
Q ss_pred CCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhcc
Q 008182 264 PCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQM 343 (575)
Q Consensus 264 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 343 (575)
. ..+..++ ... .++++........+......... .
T Consensus 191 ----------------~-~~~~~~~---~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~-~-- 225 (377)
T TIGR00890 191 ----------------V-SVKDYTV---WEM----------------------LRTPQFWVLYLSFFLNAVSGLLL-I-- 225 (377)
T ss_pred ----------------c-chhhhhH---HHH----------------------HcCccHHHHHHHHHHHhHHHHHH-H--
Confidence 0 0000000 000 00111111111111111111111 1
Q ss_pred cchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 008182 344 ITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALV 423 (575)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 423 (575)
..+.........+ ....+.+..+..+...+..++.+++.+|..+| +.+..+.++.+++.+.+...
T Consensus 226 -~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~----------~~~~~~~~~~~~~~~~~~~~ 290 (377)
T TIGR00890 226 -GLYKPYGQSLGLS----DGFLVLAVSISSIFNGGGRPFLGALSDKIGRQ----------KTMSIVFGISAVGMAAMLFI 290 (377)
T ss_pred -HHHHHHHHHcCCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----------hhhhHHHHHHHHHHHHHHHc
Confidence 1111110011111 00122334455555666666666665554433 12455666666666554432
Q ss_pred HHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 008182 424 ERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAV 503 (575)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~ 503 (575)
. ..+....+...++.+++.+...+....+..+..|++.||++.|+.+....+|..+++.+.+.
T Consensus 291 ~-----------------~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 353 (377)
T TIGR00890 291 P-----------------MLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASH 353 (377)
T ss_pred c-----------------cchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHH
Confidence 1 11112233344556666666666677788899999999999999999999999999999998
Q ss_pred hhh
Q 008182 504 VKK 506 (575)
Q Consensus 504 v~~ 506 (575)
+.+
T Consensus 354 l~~ 356 (377)
T TIGR00890 354 ALT 356 (377)
T ss_pred HHh
Confidence 764
No 41
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.90 E-value=5.2e-24 Score=223.42 Aligned_cols=365 Identities=35% Similarity=0.559 Sum_probs=240.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCC
Q 008182 92 YKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEK 171 (575)
Q Consensus 92 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 171 (575)
.|+++++.+++.+|.+++.+++..+. .++..+...+++++.++++|.|+.+|++.++++|+++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~---------------~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~ 65 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPS---------------LPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDED 65 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSS---------------C------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTT
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcch---------------hhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhccc
Confidence 47899999999999999888855333 123345678999999999999999999999999999987
Q ss_pred -ChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCcccccc-CCCCCchhH-H
Q 008182 172 -DEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYK-KSSGSPIVH-I 248 (575)
Q Consensus 172 -~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~ 248 (575)
+++ |.++|+++|++.|+|..+++.+.+++.+..||.+.|.++++..+++++.++..+++++.+ ++.+.+..+ .
T Consensus 66 ~~~~----~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~ 141 (372)
T PF00854_consen 66 DDSR----RDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFI 141 (372)
T ss_dssp TTTH----HHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--S
T ss_pred chhh----hhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhH
Confidence 443 999999999999999999999999999999999999999999999999999998888776 566666555 4
Q ss_pred HHHHHHHHHhccccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCcc-ccchhhhhHHHHHHHH
Q 008182 249 FQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKL-CSVTSVEEVKMVARLL 327 (575)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l 327 (575)
..+.....+++....+....++..........................+. ...|+. ++.+++++.|.+.+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~k~~~~~~ 214 (372)
T PF00854_consen 142 KLVLVAAFKKRKLAVPKGSSWLDWALFQYSERSIFGIIVFIRAAVIFFPE-------IFFWALFCQVQRVEELKALIRFL 214 (372)
T ss_dssp HHHHHHHHHHHCCCH-HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC-------HHHHTTTSSTTTHHHCCHHHCHH
T ss_pred HHHHHHHHHHhhcccccchHHHHHhhhhhhhhhhhhhhhhccchhhhhhh-------hhhcccCCccceeeeeeeeeecc
Confidence 44445555554443332221111110000000000001111111111000 011111 2345566667777777
Q ss_pred HHHHHHHHHHHhhhcccchhhhhhccccccccc-ccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHH
Q 008182 328 PIWATTIIFWTTYAQMITFSVEQATTMERSIGR-FQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRM 406 (575)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~ 406 (575)
+.+.....++..+.|.......+...+++...+ +.+|++.+++++.+..+++.|+.+++++|+.++.. .++...++
T Consensus 215 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~~~---~~~~~~k~ 291 (372)
T PF00854_consen 215 PIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRRGI---QPSPPQKF 291 (372)
T ss_dssp HCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT---------HHHH
T ss_pred ccCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhhcc---cchhhhhh
Confidence 777777777777777777777777777777777 89999999999999999999999999999998432 57899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHH
Q 008182 407 AIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLF 486 (575)
Q Consensus 407 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~ 486 (575)
.+|.++..+++++.+..+..+.+..+..+ ..+..|.+..+++..++|.+..+...+..++.+|++..+..+|++
T Consensus 292 ~~G~~~~~~~~~~~~~v~~~r~~~~~~~~------~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~~ 365 (372)
T PF00854_consen 292 GIGMVFAILAMFVAAIVEIRRLCYAQPCG------KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSMMGIW 365 (372)
T ss_dssp HHH-HHHHHHHHTTTHHHH---HH----T------T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhhhhcccccC------CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHHH
Confidence 99999999999998887765554444433 455578889999999999999999999777777777777777776
Q ss_pred HHHHH
Q 008182 487 LTTLS 491 (575)
Q Consensus 487 ~~~~~ 491 (575)
.....
T Consensus 366 ~~~~~ 370 (372)
T PF00854_consen 366 FALSA 370 (372)
T ss_dssp HHHH-
T ss_pred HHHhc
Confidence 65543
No 42
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.90 E-value=2.5e-21 Score=203.30 Aligned_cols=178 Identities=15% Similarity=0.121 Sum_probs=147.5
Q ss_pred CcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 008182 23 GWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQ 102 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 102 (575)
+++..+.+....+...++.....+.+| ++.+++|.+..+.+++.+.+.++..+++++.|+++||+ |||+++.++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~ 80 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIF 80 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 344455455555555555554445454 45678999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 103 TLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
.++.+++++++ +...+++.|++.|++.+...+...+++.|.+|+++ |++.
T Consensus 81 ~~~~~~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~ 130 (385)
T TIGR00710 81 ALSSLGLALSN------------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LSRI 130 (385)
T ss_pred HHHHHHHHHHc------------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HHHH
Confidence 99988887763 26678899999999999999999999999999888 9999
Q ss_pred hhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcC
Q 008182 183 FSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGT 232 (575)
Q Consensus 183 ~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 232 (575)
+++.+...++|..++|.+++++.+..+|+..|++.++..++..+...+..
T Consensus 131 ~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (385)
T TIGR00710 131 YSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFIL 180 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999889999999987776666555544433
No 43
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.90 E-value=1.7e-21 Score=205.26 Aligned_cols=175 Identities=9% Similarity=0.093 Sum_probs=150.9
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
++.++.+.+..++.....+...+.++. +.+++|.+.++.+++.+.+.+++.+++++.|+++||+ |||+++.++..+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 79 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCV 79 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHH
Confidence 356777777888887777777776765 4668999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
++.+++++++ +.+.+++.|++.|++.+...+.....+.|++++++ |++.+
T Consensus 80 ~~~~l~~~~~------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 129 (382)
T PRK10091 80 IGNAMFTLSS------------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAAV 129 (382)
T ss_pred HHHHHHHHhC------------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHHH
Confidence 9999888873 37779999999999999888888888899998877 89999
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHh
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
+....+..+|..++|.+++++.+..+||+.|++.++..++..+....
T Consensus 130 ~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 176 (382)
T PRK10091 130 AGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYF 176 (382)
T ss_pred HHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 99888999999999999999998899999999988766655544333
No 44
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.90 E-value=2.4e-21 Score=209.95 Aligned_cols=175 Identities=12% Similarity=0.046 Sum_probs=133.8
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
++.+.......++..+..+.+.+. .+++.+++|++..+.+++.+.+.+++.++++++|+++||+ |||+++..+.++.+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~~ 112 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPL-LPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLTA 112 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 344444445555555555554433 3466789999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
++.++++++++ ...+++.|+++|++.+...+ ....+++++|+++ |++++
T Consensus 113 ~~~~~~~~~~s------------------------~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~------rg~a~ 161 (476)
T PLN00028 113 PAVFCMSLVSS------------------------ATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKI------VGTAN 161 (476)
T ss_pred HHHHHHHHhcC------------------------HHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhh------eeHHH
Confidence 88888877633 56678889999998876543 4557899999888 99999
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcc---------cccchhHHHHHHHHHHHHHHHHHhc
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQD---------EISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~---------~~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
++.+...++|+.+++.+.+.+.. ..|||+.|++.+++.++..+..++.
T Consensus 162 g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 162 GIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99887778888877666654421 2489999999887766555444443
No 45
>PRK03699 putative transporter; Provisional
Probab=99.90 E-value=4.3e-21 Score=203.00 Aligned_cols=175 Identities=12% Similarity=0.096 Sum_probs=145.3
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 22 GGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
+++|..+..++..++.....+..-..++. +.+++|+|.++.+++.+.+.++..++++++|+++||+ ||||++.++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 45677777777777776666555555555 5678999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 102 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
..++.+++++++ +...+++.|+++|++.+...+...+.+.|.+|+++ |++
T Consensus 82 ~~i~~~l~~~~~------------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r~~ 131 (394)
T PRK03699 82 MILAVAGLMFSH------------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------RGS 131 (394)
T ss_pred HHHHHHHHHHcc------------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------HHH
Confidence 999988888762 36678899999999999888888999999998877 999
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhc-ccccchhHHHHHHHHHHHHHHHH
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQ-DEISRSVGYGICSVAMFMAIIIF 228 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~-~~~~~~~~f~~~~~~~~~~~~~~ 228 (575)
.++..+...++|+.++|.+.+++. +..+||++|.+.++..++..+..
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 132 RLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 998888888899999998888875 45799999998776655544443
No 46
>TIGR00895 2A0115 benzoate transport.
Probab=99.90 E-value=1.5e-21 Score=205.21 Aligned_cols=176 Identities=15% Similarity=0.158 Sum_probs=144.3
Q ss_pred CcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 008182 23 GWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQ 102 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 102 (575)
.++.+...++..++..+..+.. ....+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+.+.++.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~ 92 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAM-GFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHH
Confidence 3444444545555555544433 4455566778999999999999999999999999999999999 9999999999988
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 103 TLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
.++.+++.++. +...+++.+++.|++.+...+...+++.|.+|+++ |+++
T Consensus 93 ~~~~~~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~ 142 (398)
T TIGR00895 93 SVFTLLCALAT------------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------RGTA 142 (398)
T ss_pred HHHHHHHHHcc------------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------hchh
Confidence 88888877662 26668889999999999999999999999999888 9999
Q ss_pred hhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHh
Q 008182 183 FSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 183 ~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
+++.....++|..+++.+++++.+..+|+..|++.++..++..++...
T Consensus 143 ~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 190 (398)
T TIGR00895 143 VGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMR 190 (398)
T ss_pred HhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHH
Confidence 999999999999999999999999899999999886554444444333
No 47
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.90 E-value=2.1e-21 Score=200.13 Aligned_cols=348 Identities=20% Similarity=0.280 Sum_probs=255.6
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Q 008182 28 ALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTG 107 (575)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~ 107 (575)
+.+....++..+..+...+.++.|.+ ++|.+..+.+++.+...++..++.++.|+++||+ |||+.+.++.++..++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~ 79 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAE-DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSL 79 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHH
Confidence 34566777888888888888888765 5799999999999999999999999999999999 999999999999999988
Q ss_pred HHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhh
Q 008182 108 MLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFF 187 (575)
Q Consensus 108 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 187 (575)
+..+++ +...+++.|++.|++.+...+...+++.|.+++++ |++.+++.+
T Consensus 80 ~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 129 (352)
T cd06174 80 LLAFAS------------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFS 129 (352)
T ss_pred HHHHhc------------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHH
Confidence 887762 36778999999999999999999999999999988 999999999
Q ss_pred hhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCCCCc
Q 008182 188 FFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNV 267 (575)
Q Consensus 188 ~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (575)
...++|..++|.+++.+.+..+|++.|++.++..++..+...+..| ..
T Consensus 130 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~------------------- 177 (352)
T cd06174 130 AGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLLR-------------LL------------------- 177 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-------------HH-------------------
Confidence 9999999999999999999889999999888776666555443320 00
Q ss_pred cccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhcccchh
Q 008182 268 GMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFS 347 (575)
Q Consensus 268 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 347 (575)
....+..+........ +......+
T Consensus 178 -------------------------------------------------------~~~~~~~~~~~~~~~~-~~~~~~~~ 201 (352)
T cd06174 178 -------------------------------------------------------LLLALAFFLLSFGYYG-LLTYLPLY 201 (352)
T ss_pred -------------------------------------------------------HHHHHHHHHHHhHHHH-HHHHHHHH
Confidence 0000001111111111 11111111
Q ss_pred hhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008182 348 VEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKR 427 (575)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 427 (575)
..+..+.+ ....+.+.....+...+..++..++.+|..+|+ . .+..+.++..++.+.....
T Consensus 202 ~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------~---~~~~~~~~~~i~~~~~~~~---- 262 (352)
T cd06174 202 LQEVLGLS------AAEAGLLLSLFGLGGILGALLGGLLSDRLGRRR------L---LLLIGLLLAALGLLLLALA---- 262 (352)
T ss_pred HHHhcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------H---HHHHHHHHHHHHHHHHHHh----
Confidence 11110111 112234455556666666666666654443331 0 3677777777777766643
Q ss_pred HHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008182 428 LSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKV 507 (575)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~ 507 (575)
.+.+......++.+++.+...+....++.+..|++.|++.+|+++....+|..+++.+.+.+.+.
T Consensus 263 ---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~ 327 (352)
T cd06174 263 ---------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT 327 (352)
T ss_pred ---------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22445677889999999999999999999999999999999999999999999999999987641
Q ss_pred cCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHH
Q 008182 508 TGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYL 545 (575)
Q Consensus 508 ~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~ 545 (575)
. + ....+++.+++.+++.+.++
T Consensus 328 ~------~----------~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 328 G------G----------YGGVFLILAALALLAALLLL 349 (352)
T ss_pred c------C----------cchHHHHHHHHHHHHHHHhe
Confidence 1 1 24556777777776666543
No 48
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.90 E-value=4.2e-21 Score=202.98 Aligned_cols=167 Identities=13% Similarity=0.192 Sum_probs=139.6
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.++.++...++..++...+...++.. .+++|.+..+.+++.+.+.+.+.++.+++|+++||+ ||||+++++.++.++
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHH
Confidence 456777778888877665555555554 568899999999999999999999999999999999 999999999999998
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
+.+++.++.+ .++.|+++|++.+...|+..+++.|.+|+++ |+++.+
T Consensus 81 ~~~~~~~~~~---------------------------~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~~ 127 (393)
T PRK11195 81 GCLLMLFGIH---------------------------PLLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKANG 127 (393)
T ss_pred HHHHHHHHHH---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHH
Confidence 8877766521 2678999999999999999999999999988 999999
Q ss_pred hhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHH
Q 008182 185 RFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIII 227 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~ 227 (575)
+.....++|..+||.++|++.+. .|+..+.+.+...+++.+.
T Consensus 128 ~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~~ 169 (393)
T PRK11195 128 WMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAALF 169 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999874 4777777666554444433
No 49
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.90 E-value=6.3e-21 Score=207.51 Aligned_cols=176 Identities=14% Similarity=0.060 Sum_probs=132.7
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchh-hHH-----HHHHHHHHHHHHHHHHHHHhhcccchHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSAT-SAN-----IVTDFMGTSFLLCLLGGFLADTFLGRYKTIAI 97 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~-~~~-----~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~ 97 (575)
++.+....+..+++.+.+.. ..+..+++.++++.+..+ ..+ +.++..++..+++++.|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGV-YGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 45566666777777766654 456667888887644422 122 24667788999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhh
Q 008182 98 FAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKT 177 (575)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 177 (575)
+++++++++++++++++...+. .....++++.|+++|+|.|+..+...++++|++|+++
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~g----------------~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~----- 151 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATIG----------------IWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK----- 151 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHHH----------------HHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC-----
Confidence 9999999999999884422100 0001248899999999999999999999999999998
Q ss_pred hhhhhhhhhhhhHHHhHHHHHHHHhhhc--------ccccchhHHHHHHHHHHH
Q 008182 178 QMAYFFSRFFFFISLGTLMAVTVLVYIQ--------DEISRSVGYGICSVAMFM 223 (575)
Q Consensus 178 ~r~~~~~~~~~~~~ig~~l~~~i~~~l~--------~~~~~~~~f~~~~~~~~~ 223 (575)
|++..++...+..+|..+++.+...+. ..+|||++|++.++..++
T Consensus 152 -Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 152 -RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 999999888877888887776554432 257999999987654443
No 50
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.90 E-value=4.7e-21 Score=207.16 Aligned_cols=150 Identities=9% Similarity=0.082 Sum_probs=131.1
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCc
Q 008182 55 TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQA 134 (575)
Q Consensus 55 ~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (575)
+++++..+.|++.+.+.+++.++++++|+++||+ |||+++.++.++.+++.+++.++.+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------------- 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-------------------- 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH--------------------
Confidence 6899999999999999999999999999999999 9999999999988888877765422
Q ss_pred cchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhccc-ccchhH
Q 008182 135 SGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDE-ISRSVG 213 (575)
Q Consensus 135 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~-~~~~~~ 213 (575)
.+...+++.|+++|++.+...|....+++|++|+++ |++++++...+.++|..+++.+.+++.+. .+|+++
T Consensus 129 --~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~ 200 (465)
T TIGR00894 129 --GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMI 200 (465)
T ss_pred --cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCee
Confidence 125568899999999999999999999999999988 99999999999999999999999999888 499999
Q ss_pred HHHHHHHHHHHHHHHHhcCc
Q 008182 214 YGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 214 f~~~~~~~~~~~~~~~~~~~ 233 (575)
|++.++..++..++++...+
T Consensus 201 f~i~~~~~~~~~~~~~~~~~ 220 (465)
T TIGR00894 201 FYVFGIVGCAWSLLWFVFPA 220 (465)
T ss_pred hhhhhHHHHHHHHHHHHHhc
Confidence 99988776665555544433
No 51
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.90 E-value=7.3e-21 Score=201.06 Aligned_cols=174 Identities=14% Similarity=0.086 Sum_probs=144.9
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 22 GGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
+.+|.++......++..+..+...+.+|. +.+++|.++.+.+++.+.+.++..+++++.|+++||+ |||+++.++.++
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~-i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIAD-MARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHH
Confidence 35667777777777777666655555554 4578999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 102 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
..++.+++.+++ +...+++.|++.|++.+...+....+..|.+++++ |++
T Consensus 83 ~~~~~~~~~~~~------------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~ 132 (394)
T PRK11652 83 FILGTLVALFAH------------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------LRH 132 (394)
T ss_pred HHHHHHHHHHHc------------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------HHH
Confidence 998888877662 26678899999999988877777888889888777 888
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHH
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIII 227 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~ 227 (575)
+.++...+..++..++|.+++++.+..+|++.|++.++..++..+.
T Consensus 133 ~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 178 (394)
T PRK11652 133 ANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFS 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH
Confidence 9999889999999999999999998889999999877655544433
No 52
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.90 E-value=8.6e-21 Score=201.23 Aligned_cols=172 Identities=12% Similarity=0.029 Sum_probs=141.6
Q ss_pred CCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Q 008182 21 TGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAA 100 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~ 100 (575)
-+.||.+....+..++...+.+....++++++ +++|++..+.+++.+.+.++..++.++.|+++||+ ||||++..+..
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~ 86 (402)
T TIGR00897 9 IGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLL 86 (402)
T ss_pred cCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHH
Confidence 45677888888888888888887888899988 56899999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhh
Q 008182 101 VQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA 180 (575)
Q Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 180 (575)
+..++.+++..... .. .+...+++.|++.|+|.+...+...+.+.+.+++++ |+
T Consensus 87 ~~~~~~~~~~~~~~-~~-------------------~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~------~g 140 (402)
T TIGR00897 87 LWCVGHAAFIVFGL-GH-------------------ANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN------LS 140 (402)
T ss_pred HHHHHHHHHHHHhc-cC-------------------ccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH------HH
Confidence 98888765532111 00 136667788999999988777777778889898888 99
Q ss_pred hhhhhhhhhHHHhH-HHHHHHHhhhcccccchhHHHHHHHH
Q 008182 181 YFFSRFFFFISLGT-LMAVTVLVYIQDEISRSVGYGICSVA 220 (575)
Q Consensus 181 ~~~~~~~~~~~ig~-~l~~~i~~~l~~~~~~~~~f~~~~~~ 220 (575)
+++++.+.+.++|. .++|.+++++.+..||+..+|.....
T Consensus 141 ~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~ 181 (402)
T TIGR00897 141 SAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAF 181 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 99999999999996 57899999998888877666654433
No 53
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.89 E-value=2.9e-21 Score=208.02 Aligned_cols=174 Identities=9% Similarity=-0.029 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHHHhh---HHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 28 ALVLGIELCERLSTMGI---AVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 28 ~~~~~~~~~~~~~~~~~---~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.++...++.....|.. .....+|+.++ |++..+.+++.+.+.++..++++++|+++||+ |||++++++.++.++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i 105 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAA 105 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHH
Confidence 44444444444544433 23445677877 99999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
+.++++++.... .+...+++.|++.|++.+...+.....+.|++++++ |+++++
T Consensus 106 ~~~~~~~~~~~~--------------------~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~ 159 (452)
T PRK11273 106 VMLFMGFVPWAT--------------------SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVS 159 (452)
T ss_pred HHHHHHhhhccc--------------------ccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHH
Confidence 888887752100 136667888999999999888888888899999888 999999
Q ss_pred hhhhhHHHhHH-HHHHHHhhhcccccchhHHHHHHHHHHHHHHHHH
Q 008182 185 RFFFFISLGTL-MAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFL 229 (575)
Q Consensus 185 ~~~~~~~ig~~-l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 229 (575)
+++.+.++|+. .+|+.+..+....+||+.|++.++..++..++..
T Consensus 160 ~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~ 205 (452)
T PRK11273 160 VWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAF 205 (452)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 99999998875 4555433333345899999988776555444333
No 54
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.89 E-value=1.4e-20 Score=198.89 Aligned_cols=180 Identities=15% Similarity=0.130 Sum_probs=130.6
Q ss_pred CCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHH-HHHHHHHHHHHHhhcccchHHHHH-HH
Q 008182 21 TGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMG-TSFLLCLLGGFLADTFLGRYKTIA-IF 98 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Gr~~~~~-~~ 98 (575)
+..-...+..++..++.+++.....+.++.|+++++|++.++.|++.+.+.+ +..++++++|+ +||+ ||||.++ .+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~ 88 (393)
T PRK15011 11 KSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFC 88 (393)
T ss_pred hhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHH
Confidence 3334466777788999999999899999999999999999999999876655 55555555666 9999 9998754 45
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHH-HHHHHHcccccccchhccccccCCCCChHhhh
Q 008182 99 AAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIA-LYLIALGTGGLKSSVSGFGTDQFDEKDEKEKT 177 (575)
Q Consensus 99 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 177 (575)
.++.+++..+.+++.+ ...+++. +++.+++ +...|....+..|..++++
T Consensus 89 ~~~~~~~~~~~~~~~~------------------------~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----- 138 (393)
T PRK15011 89 CLLGVLACTLFAWNRN------------------------YFVLLFVGVFLSSFG-STANPQMFALAREHADKTG----- 138 (393)
T ss_pred HHHHHHHHHHHHHhhH------------------------HHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhcc-----
Confidence 5555566666666532 4444444 4444444 4556777777777665544
Q ss_pred hh--hhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 178 QM--AYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 178 ~r--~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
| +...++.+.+.++|..++|.+++++.+..|||..|++.++..++..+..+...|
T Consensus 139 -~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 195 (393)
T PRK15011 139 -REAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLP 195 (393)
T ss_pred -chHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcC
Confidence 4 344577888899999999999999998899999999888766655555444333
No 55
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.89 E-value=6.5e-21 Score=203.35 Aligned_cols=393 Identities=11% Similarity=0.036 Sum_probs=227.7
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
.+.+|.+.+..++..++++...++++.|+.+++|++..+.+.+.+.+.+...+++++.|+++||+ ||||+++++..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~ 87 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLL 87 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHH
Confidence 35677777888888888888899999999999999999999999999999999999999999999 99999988766655
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
++..........+. .......+..+.++..+...+...+.+.++.++..+ +++..+
T Consensus 88 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~ 143 (420)
T PRK09528 88 VLFGPFFIYVFAPL--------------------LQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSR----RSGFEY 143 (420)
T ss_pred HHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHh----hccccc
Confidence 54432211100000 000011122222222222222223333333321111 167778
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccC
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDL 263 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (575)
+......++|..++|.+++++.+ .+|+.+|++.++..++.++..+..+++.++++...+. .
T Consensus 144 g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------- 204 (420)
T PRK09528 144 GRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANA-L----------------- 204 (420)
T ss_pred hhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccc-h-----------------
Confidence 88888889999999999999976 5899999988877666665555443321111000000 0
Q ss_pred CCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHH-HHHHHhhhc
Q 008182 264 PCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATT-IIFWTTYAQ 342 (575)
Q Consensus 264 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~ 342 (575)
+ . .++...+-+..... ++ +.+.......... ..+.....+
T Consensus 205 -~------------~---~~~~~~~~~~~~~l----------------------~~-~~~~~l~l~~~~~~~~~~~~~~~ 245 (420)
T PRK09528 205 -G------------A---NASAVSLKDALALL----------------------KL-PKFWFLVLYVIGVACFYDVFDQQ 245 (420)
T ss_pred -h------------c---ccccccHHHHHHHc----------------------cC-CCeEeehHHHHHHHHHHHHHHHH
Confidence 0 0 00000000000000 00 1111111111111 112222222
Q ss_pred ccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 008182 343 MITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAAL 422 (575)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 422 (575)
.+..+.... .+.... ....+.+..++.+...+..++.+++.+|+.+| +.+..+.++.+++++.+++
T Consensus 246 ~~~~~~~~~--~~~~~~--~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~----------~~~~~~~~l~~~~~~l~~~ 311 (420)
T PRK09528 246 FPNFFASFF--ATPEQG--TRVFGYLNSFQVFLEALIMFFAPFIINRIGAK----------NALLLAGTIMAVRIIGSGF 311 (420)
T ss_pred HHHHHHHHH--hccCcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc----------hhhHHHHHHHHHHHHHHHh
Confidence 222221110 010100 00112334444555555566666665444433 2256666666776666654
Q ss_pred HHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHH-HHHHHHHHHHHHHHHH
Q 008182 423 VERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGL-FLTTLSLGFFVSSFLV 501 (575)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~lg~~lg~~l~ 501 (575)
. .++++++...++.+++.....+....++.+..|++.+++..++ +++...+|..+++.+.
T Consensus 312 ~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~ 372 (420)
T PRK09528 312 A-------------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLA 372 (420)
T ss_pred c-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHH
Confidence 3 2344566667788888888888888899999999999988765 6777889999999999
Q ss_pred HhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhh
Q 008182 502 AVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICA 548 (575)
Q Consensus 502 ~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~ 548 (575)
|.+.+..+ .+..|...+++.++..++.+...
T Consensus 373 G~l~~~~G----------------~~~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 373 GNLYDSIG----------------FQGTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred HHHHHhhC----------------chHHHHHHHHHHHHHHHHHHHHh
Confidence 98875331 25567777777766665554443
No 56
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.89 E-value=9.9e-21 Score=199.26 Aligned_cols=159 Identities=13% Similarity=0.177 Sum_probs=139.5
Q ss_pred CcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 008182 23 GWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQ 102 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 102 (575)
+.|.++.+++..++..++...+.+.+|.|+. ++|.|..+.|++.+.+.++..+++++.|+++||+ |||+++.++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~ 81 (381)
T PRK03633 4 YTRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIF 81 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHH
Confidence 3567888899999999998888899998887 6799999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 103 TLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
+++..++++++ +...++++|++.|++.+...+...+.+.+..++++ |++.
T Consensus 82 ~~~~~~~~~~~------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~ 131 (381)
T PRK03633 82 AAGCAGLGLMV------------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RGRL 131 (381)
T ss_pred HHHHHHHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHH
Confidence 99988888763 36778899999999999888887777788888777 9999
Q ss_pred hhhhhhhHHHhHHHHHHHHhhhcccccchhH
Q 008182 183 FSRFFFFISLGTLMAVTVLVYIQDEISRSVG 213 (575)
Q Consensus 183 ~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~ 213 (575)
++++..+.++|..+||.+++.+.+...+...
T Consensus 132 ~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~ 162 (381)
T PRK03633 132 LAAYMMVYYLGTVLGQLLVSKVSTELMSVLP 162 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccchHH
Confidence 9999999999999999999998775433333
No 57
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.89 E-value=2.7e-20 Score=203.22 Aligned_cols=182 Identities=15% Similarity=0.117 Sum_probs=135.0
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhh----cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVG----TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAA 100 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~ 100 (575)
+.+....+..++..+....+....+..-.+ +.+.+..+.+++.+.+.++..++++++|+++||+ |||+++.++++
T Consensus 16 ~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~~ 94 (502)
T TIGR00887 16 RAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMELI 94 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHH
Confidence 344444444455544443333333332221 1345566788999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhh
Q 008182 101 VQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA 180 (575)
Q Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 180 (575)
++.++.++++++.+. ....+...++++|+++|++.|...+....+++|.+|+++ |+
T Consensus 95 ~~~v~~~~~~~~~~~------------------~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------Rg 150 (502)
T TIGR00887 95 IMIIATVASGLSPGS------------------SPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------RG 150 (502)
T ss_pred HHHHHHHHHHHccCc------------------ccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------HH
Confidence 999998888775220 011235679999999999999999999999999999999 99
Q ss_pred hhhhhhhhhHHHhHHHHHHHHhhhcc-----------------------cccchhHHHHHHHHHHHHHHHHHhc
Q 008182 181 YFFSRFFFFISLGTLMAVTVLVYIQD-----------------------EISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 181 ~~~~~~~~~~~ig~~l~~~i~~~l~~-----------------------~~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
++.++.+....+|..+++.+...+.. ..+||++|.+.++..++..+..++.
T Consensus 151 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~l 224 (502)
T TIGR00887 151 AMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTI 224 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999887765421 1379999987776655554444333
No 58
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.89 E-value=5e-21 Score=208.56 Aligned_cols=169 Identities=17% Similarity=0.199 Sum_probs=145.6
Q ss_pred CCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Q 008182 21 TGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAA 100 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~ 100 (575)
+.+++.+..+.+..++..+..+.... +.+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITL-VLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 34566777777777777776665544 44566788999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhh
Q 008182 101 VQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA 180 (575)
Q Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 180 (575)
+.+++.++++++. +...+++.|++.|++.+...+...+++.|.+++++ |+
T Consensus 94 ~~~~~~~~~~~~~------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~ 143 (496)
T PRK03893 94 LFSVGTLACGFAP------------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------RN 143 (496)
T ss_pred HHHHHHHHHHHHh------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HH
Confidence 9999998888763 36778999999999999989999999999999888 99
Q ss_pred hhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHH
Q 008182 181 YFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAM 221 (575)
Q Consensus 181 ~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~ 221 (575)
+++++.....++|..++|.+.+++.+..+|++.|++..+..
T Consensus 144 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~ 184 (496)
T PRK03893 144 KASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPI 184 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998754433
No 59
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.89 E-value=3.7e-20 Score=197.01 Aligned_cols=148 Identities=15% Similarity=0.132 Sum_probs=130.8
Q ss_pred hhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccc
Q 008182 52 LVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTC 131 (575)
Q Consensus 52 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 131 (575)
+.+++|.+..+.++..+++.+++.+++++.|+++||+ |||++++.+..+..++.+++++++
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~------------------ 102 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT------------------ 102 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC------------------
Confidence 5678999999999999999999999999999999999 999999999999999998888763
Q ss_pred cCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccccch
Q 008182 132 EQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRS 211 (575)
Q Consensus 132 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~ 211 (575)
+...++++|+++|++.+...+.....+.|.+++++ |++.+++.....++|..++|.+++.+.+..+||
T Consensus 103 ------~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~ 170 (413)
T PRK15403 103 ------SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMHFVHWK 170 (413)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 37778999999999988766666778899999888 899999999999999999999999998888999
Q ss_pred hHHHHHHHHHHHHHHHHHh
Q 008182 212 VGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 212 ~~f~~~~~~~~~~~~~~~~ 230 (575)
+.|++.++..+++.+..++
T Consensus 171 ~~f~~~~~~~~i~~~~~~~ 189 (413)
T PRK15403 171 VLFAIIAVMGLIAFVGLLL 189 (413)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999988776666555443
No 60
>PRK15075 citrate-proton symporter; Provisional
Probab=99.88 E-value=4.3e-20 Score=197.88 Aligned_cols=173 Identities=14% Similarity=0.049 Sum_probs=127.8
Q ss_pred CcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHH-HHH-----HHHHHHHHHHHHHHhhcccchHHHHH
Q 008182 23 GWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIV-TDF-----MGTSFLLCLLGGFLADTFLGRYKTIA 96 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~-~~~-----~~~~~~~~~~~G~laDr~~Gr~~~~~ 96 (575)
+++.....++..+++.+....+ ....+.+.++++.++.+.+... +.. .+...+++++.|+++||+ ||||+++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~ 90 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLF-GFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLI 90 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHH
Confidence 4455555566666666555544 5556678889998887765443 222 222246789999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhh
Q 008182 97 IFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEK 176 (575)
Q Consensus 97 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 176 (575)
.+.+++.++.++++++++...+. ......++++|+++|++.+...+....+++|++|+++
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~----------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~---- 150 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATIG----------------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR---- 150 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHH----------------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc----
Confidence 99999999999998874321100 0001246889999999999999988999999999999
Q ss_pred hhhhhhhhhhhhhHHHhHHHHHHHHhhh--------cccccchhHHHHHHH
Q 008182 177 TQMAYFFSRFFFFISLGTLMAVTVLVYI--------QDEISRSVGYGICSV 219 (575)
Q Consensus 177 ~~r~~~~~~~~~~~~ig~~l~~~i~~~l--------~~~~~~~~~f~~~~~ 219 (575)
|++.+++.....++|..+++.+++.+ .+..|||++|++..+
T Consensus 151 --rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 151 --KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred --chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 99999998888888888877777665 246799999987543
No 61
>TIGR00898 2A0119 cation transport protein.
Probab=99.88 E-value=8e-21 Score=207.51 Aligned_cols=148 Identities=20% Similarity=0.241 Sum_probs=129.6
Q ss_pred HHhhhcCCCC---chhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCc
Q 008182 50 TYLVGTMHLP---SATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKET 126 (575)
Q Consensus 50 ~yl~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 126 (575)
+.+.++++++ ..+.+++.+++.++..++.++.|+++||+ |||++++++.++..++.++.++++
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~------------- 178 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP------------- 178 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc-------------
Confidence 4567789999 89999999999999999999999999998 999999999999999988888773
Q ss_pred CcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcc
Q 008182 127 ATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD 206 (575)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~ 206 (575)
+...+++.|++.|++.+...+....++.|.+|+++ |+...++...+..+|..+++.++..+.+
T Consensus 179 -----------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 241 (505)
T TIGR00898 179 -----------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFIPD 241 (505)
T ss_pred -----------cHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 37779999999999999999999999999999988 9999999888899999999988776654
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhc
Q 008182 207 EISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 207 ~~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
||+.|++.++..++..+..++.
T Consensus 242 ---wr~~~~~~~i~~~~~~~~~~~~ 263 (505)
T TIGR00898 242 ---WRWLQLAVSLPTFLFFLLSWFV 263 (505)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998887766665555443
No 62
>PRK11043 putative transporter; Provisional
Probab=99.88 E-value=3.6e-20 Score=196.22 Aligned_cols=162 Identities=14% Similarity=0.195 Sum_probs=134.9
Q ss_pred HHHHhhHHHHHHH--hhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008182 39 LSTMGIAVNLVTY--LVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLR 116 (575)
Q Consensus 39 ~~~~~~~~~l~~y--l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~ 116 (575)
++++....++|.+ +.+++|.+..+.+++.+++.++..++++++|+++||+ |||+++.++..+..++.+++.++.
T Consensus 17 ~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~--- 92 (401)
T PRK11043 17 LGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVE--- 92 (401)
T ss_pred HHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhc---
Confidence 3333444444433 6778999999999999999999999999999999999 999999999998888888887762
Q ss_pred ccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHH
Q 008182 117 QLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLM 196 (575)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l 196 (575)
+...+++.|+++|++.+...+...+++.|.+++++ +++.++......++|..+
T Consensus 93 ---------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 145 (401)
T PRK11043 93 ---------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVALSPAL 145 (401)
T ss_pred ---------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHHHH
Confidence 36678899999999988777777888999999877 888888888888999999
Q ss_pred HHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhc
Q 008182 197 AVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 197 ~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
+|.+++++.+..+|++.|++.++..++..+..+..
T Consensus 146 g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 146 APLLGAWLLNHFGWQAIFATLFAITLLLILPTLRL 180 (401)
T ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999998999999998877666655554443
No 63
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.88 E-value=7.9e-20 Score=192.50 Aligned_cols=365 Identities=11% Similarity=0.016 Sum_probs=223.8
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH-HH
Q 008182 27 AALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT-LG 105 (575)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~-~~ 105 (575)
.+.+.+..++...++....+++|.|++ ++|++..+.+++.+.+.+...+++++.|.++||+ ||++.....+.+.. +.
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~ 83 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIF 83 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHH
Confidence 344555566666666666788999986 6899999999999999999999999999999998 98543322211111 11
Q ss_pred HH-HHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 106 TG-MLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 106 ~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
.+ ++..+ .+.+.+++.|.+++.+.+...|...++..+. +++ |++.++
T Consensus 84 ~~~~~~~~------------------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~------~~~~~g 131 (382)
T TIGR00902 84 AAAFSAGA------------------------HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQ------FGLDYG 131 (382)
T ss_pred HHHHHHhh------------------------hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHH------cCCCcc
Confidence 11 22222 2367788889999988888888888876543 344 889999
Q ss_pred hhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCC
Q 008182 185 RFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLP 264 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (575)
......++|..++|.+++++.+.+||+..|++..+...+.++ .....++.++++++ ++ .
T Consensus 132 ~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~-~------------------ 190 (382)
T TIGR00902 132 KVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLI-GFLIKPTIPPKDAI-PE-D------------------ 190 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHcCCCCCCCccc-cc-c------------------
Confidence 999999999999999999999999999999876554332222 22222211100000 00 0
Q ss_pred CCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008182 265 CNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMI 344 (575)
Q Consensus 265 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 344 (575)
+ ..+..++. +-.++++.+...+..++....+...+...
T Consensus 191 -------------~---~~~~~~~~-------------------------~~l~~~~~~~~l~~~~l~~~~~~~~~~~~- 228 (382)
T TIGR00902 191 -------------E---SQGDSAFI-------------------------ALLKNPMNLRFLAAVCLIQGAHAAYYGFS- 228 (382)
T ss_pred -------------c---cccchhHH-------------------------HHHcChHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 0 00000000 00111121111111222222222222211
Q ss_pred chhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 008182 345 TFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVE 424 (575)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 424 (575)
..+.. ..+.+.. ..+....+..+..++...+. .++.+| .+..+.+..+.++.++.++.++..
T Consensus 229 ~~~l~-~~g~s~~------~~g~l~~~~~~~~i~~~~~~----~~l~~r------~g~~~~l~~~~~~~~~~~~~~~~~- 290 (382)
T TIGR00902 229 AIYWQ-AAGISAS------ATGLLWGIGVLAEIIIFAFS----NKLFQN------CSARDLLLISAIACVGRWAIIGAI- 290 (382)
T ss_pred HHHHH-HCCCCHh------HHHHHHHHHHHHHHHHHHHh----HHHHhh------CCHHHHHHHHHHHHHHHHHHHHhH-
Confidence 11211 1111111 11222233333333333333 333444 345555778888888888777653
Q ss_pred HHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHH-HHHHHHHHHHHHHHHh
Q 008182 425 RKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFL-TTLSLGFFVSSFLVAV 503 (575)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~lg~~lg~~l~~~ 503 (575)
.+++.++...++.++..++..+....++.+. |++.|++++++++ +..++|..+++.+.|.
T Consensus 291 ------------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~ 351 (382)
T TIGR00902 291 ------------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGF 351 (382)
T ss_pred ------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2344566778999999999999999999988 9999999999987 4678999999999999
Q ss_pred hhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHH
Q 008182 504 VKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLV 542 (575)
Q Consensus 504 v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~ 542 (575)
+.+..+ ...|+..+++++++.+
T Consensus 352 l~~~~g-----------------~~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 352 IYPTLG-----------------AGTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHhcc-----------------HHHHHHHHHHHHHHHH
Confidence 875432 2446777777765543
No 64
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.88 E-value=6.7e-21 Score=198.82 Aligned_cols=155 Identities=14% Similarity=0.046 Sum_probs=135.1
Q ss_pred HHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 008182 46 VNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKE 125 (575)
Q Consensus 46 ~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 125 (575)
....+++.+++|++..+.+++.+++.++..++.++.|+++||+ |||+++.++.++..++.++++++.
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 81 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST------------ 81 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh------------
Confidence 3345578889999999999999999999999999999999999 999999999999999999888873
Q ss_pred cCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHH-HHHhhh
Q 008182 126 TATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAV-TVLVYI 204 (575)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~-~i~~~l 204 (575)
+.+.+++.|++.|++.+...+...+++.|.+|+++ |++++++...+.++|..++| .+++.+
T Consensus 82 ------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~ 143 (379)
T TIGR00881 82 ------------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLFGI 143 (379)
T ss_pred ------------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHHHH
Confidence 36778899999999999999999999999999888 99999999999999999999 577777
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhc
Q 008182 205 QDEISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 205 ~~~~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
.+..+|++.|++.++..++..+..++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (379)
T TIGR00881 144 AELYSWHWVFIVPGIIAIIVSLICFLL 170 (379)
T ss_pred HhcCCchhHHHHHHHHHHHHHHHHhee
Confidence 777899999988777665554444433
No 65
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.88 E-value=1.5e-20 Score=200.27 Aligned_cols=378 Identities=16% Similarity=0.208 Sum_probs=250.7
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCc
Q 008182 55 TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQA 134 (575)
Q Consensus 55 ~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (575)
++++++.|.+++.+.+..++.++++++|+++||+ |-|+++..+.++.++++++.+++....
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~~~------------------ 127 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAASIG------------------ 127 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHhc------------------
Confidence 5889999999999999999999999999999999 999999999999999999999986522
Q ss_pred cchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhccc-ccchhH
Q 008182 135 SGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDE-ISRSVG 213 (575)
Q Consensus 135 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~-~~~~~~ 213 (575)
...+++.|+++|++.|...|+...+.+.+.|+++ |++..++.+.+..+|.+++-.++|++.+. .||+.+
T Consensus 128 ----~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~si 197 (466)
T KOG2532|consen 128 ----FYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSI 197 (466)
T ss_pred ----chhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchH
Confidence 3467899999999999999999999999999999 99999999999999999999999999998 999999
Q ss_pred HHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCCCCccccccCCcccccccCCcchhhhhHHh
Q 008182 214 YGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAA 293 (575)
Q Consensus 214 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 293 (575)
|++.+++.++..++++....+.+ ++++.- ..+++..+++..
T Consensus 198 fY~~g~~g~i~~~~w~~~~~d~P----~~h~~i-----------------------------------s~~El~~I~~~k 238 (466)
T KOG2532|consen 198 FYVFGIVGLIWFILWFLFYSDSP----SKHPNI-----------------------------------SEKELKYIEKGK 238 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCc----ccCCCC-----------------------------------CHHHHHHHHhcc
Confidence 99999888877777666544222 111100 001111111110
Q ss_pred hhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhcccccccccccccccccccchh
Q 008182 294 IVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFV 373 (575)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (575)
...+. ......||+..-. +...+...+..+.....++....+.++++ .+..+++.. ..+.+.+++.
T Consensus 239 ~~~~~---~~~~~vP~~~i~t----s~~vwai~~~~f~~~~~~~~l~~y~PtY~-~~VL~f~v~------~~G~~salP~ 304 (466)
T KOG2532|consen 239 SEAHV---KKKPPVPYKAILT----SPPVWAIWISAFGGNWGFYLLLTYLPTYL-KEVLGFDVR------ETGFLSALPF 304 (466)
T ss_pred ccccc---CCCCCCCHHHHHc----CHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHhCCChh------hhhHHHHHHH
Confidence 00000 0012456632111 01111111222222333333333333322 222233322 3566777888
Q ss_pred HHHHHHHHHHhHHHhhhhhhccCCCCCCchhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHH
Q 008182 374 SAILITLAVYDRLIMPLWKKWKGKPGFTNLQRM--AIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQ 451 (575)
Q Consensus 374 ~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 451 (575)
+...+...+.+.+.|++.+| .- +.+..+++ .++....++.++.+++.. ....++.+.
T Consensus 305 l~~~~~k~~~g~lsD~l~~~-~l--s~t~~rkifn~i~~~~~ai~l~~l~~~~------------------~~~~~~a~~ 363 (466)
T KOG2532|consen 305 LAMAIVKFVAGQLSDRLTFR-IL--SETTVRKIFNTIAFGGPAVFLLVLAFTS------------------DEHRLLAVI 363 (466)
T ss_pred HHHHHHHHHHHHHHHHHhhc-cC--chHhHHHHHHhHHHHHHHHHHHeeeecC------------------CCcchHHHH
Confidence 88888888888888888776 22 23444444 445555555555555541 111122222
Q ss_pred HHHHHHHHHHhh-hhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcccchhHHH
Q 008182 452 FFLVGAGEAFIY-TGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFY 530 (575)
Q Consensus 452 ~~l~g~g~~~~~-~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f 530 (575)
....+.+..... +..+.-..+.+| +.-+..+|+.+....+.++++|.+++.+.. . +...+| ..+|
T Consensus 364 ~l~~~~~~~g~~~~Gf~~~~~~~ap-q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~--~t~~eW----------~~VF 429 (466)
T KOG2532|consen 364 LLTIAIGLSGFNISGFYKNHQDIAP-QHAGFVMGIINFVGALAGFIAPLLVGIIVT-D--NTREEW----------RIVF 429 (466)
T ss_pred HHHHHHHHcccchhhhHhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHheeeEeC-C--CCHHHH----------HHHH
Confidence 233333333333 333333333355 669999999999999999999999998763 1 123355 7889
Q ss_pred HHHHHHHHHHHHHHHhhhh
Q 008182 531 GLLAILSIINLVIYLICAV 549 (575)
Q Consensus 531 ~~~a~l~~v~~~~~~~~~~ 549 (575)
++.+++.++..++|.+++.
T Consensus 430 ~i~a~i~~~~~i~f~~f~s 448 (466)
T KOG2532|consen 430 LIAAGILIVGNIIFLFFGS 448 (466)
T ss_pred HHHHHHHHHhchheeEeec
Confidence 9999999999988877753
No 66
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.88 E-value=1.2e-20 Score=202.38 Aligned_cols=159 Identities=8% Similarity=-0.000 Sum_probs=129.3
Q ss_pred HHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCc
Q 008182 47 NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKET 126 (575)
Q Consensus 47 ~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 126 (575)
...+++++ +|++..+.+++.+++.++..+++++.|+++||+ |||+.+.++.++.+++.+++++.++..
T Consensus 48 ~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 115 (438)
T TIGR00712 48 LAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWAT---------- 115 (438)
T ss_pred hhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhcccccc----------
Confidence 34456665 599999999999999999999999999999999 999999999988888887776542110
Q ss_pred CcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhh-c
Q 008182 127 ATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYI-Q 205 (575)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l-~ 205 (575)
.+...+++.|++.|++.+...+.....+.|++|+++ |++++++++...++|+.+++.+.+.. .
T Consensus 116 ----------~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~~~~ 179 (438)
T TIGR00712 116 ----------SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLLGMA 179 (438)
T ss_pred ----------chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHHHHH
Confidence 135567788999999999888888899999999999 99999999999999999998777654 4
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 206 DEISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 206 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
+..+||..|++.++..++..+..++..+
T Consensus 180 ~~~~w~~~f~~~~~~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 180 WFNDWHAALYFPAICAIIVALFAFAMMR 207 (438)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4568999999988776665544444333
No 67
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.4e-21 Score=199.34 Aligned_cols=180 Identities=13% Similarity=0.161 Sum_probs=160.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 22 GGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
..++.+.+++++++.++..=|.+.. .-.-.++.+|++.+..|.+.+.+.+.+.++.|+.|+++||+ .||+++.+|..+
T Consensus 30 ~~~~~l~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~i 107 (493)
T KOG1330|consen 30 SPTLTLVILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFI 107 (493)
T ss_pred cchHHHHHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHH
Confidence 3345677777888888887776655 33455778999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 102 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
+.++++.++++. .++.+.+.|.+.|+|.+.+.|..+++++|.|++.+ |++
T Consensus 108 W~~Av~~~~fs~------------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~------Rs~ 157 (493)
T KOG1330|consen 108 WTLAVFASGFSN------------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK------RSR 157 (493)
T ss_pred HHHHHHHHHHHH------------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcchh------hhH
Confidence 999999999882 38889999999999999999999999999999999 999
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhccccc-chhHHHHHHHHHHHHHHHHHhcCc
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQDEIS-RSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~~~~-~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
.++++|+++++|.++|.++++++.+..+ ||+.|+..+++.++..++..++.+
T Consensus 158 ~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 158 VLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred HHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence 9999999999999999999999988877 999999999888887777666654
No 68
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.87 E-value=8.3e-20 Score=193.23 Aligned_cols=390 Identities=8% Similarity=0.021 Sum_probs=231.2
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.+|......++...++..+.++++.|+++++|++..+.+++.+++.+...+++++.|+++||+ ||||.++.+....++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 5678888889999999999999999999999999999999999999999999999999999999 999999888766655
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
+..........+.. .......+++++++.+++.+...+....+..|.- ++ ++..++
T Consensus 81 ~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~------~~~~~g 136 (396)
T TIGR00882 81 LFAPFFIYVFGPLL----------------QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RN------SNFEYG 136 (396)
T ss_pred HHHHHHHHHhhhHH----------------HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hh------cccccc
Confidence 44322211000100 0011334566678888888877777766665532 22 445667
Q ss_pred hhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCC
Q 008182 185 RFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLP 264 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (575)
......++|..++|.+++.+.+ .+|+.+|++.++..++..+..+...++.++++. . .+ ..
T Consensus 137 ~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~------------~~--- 196 (396)
T TIGR00882 137 KARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSSAT---V-AN------------AL--- 196 (396)
T ss_pred hhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhh---h-hc------------cc---
Confidence 7778889999999999998866 699999998877766655444433322111000 0 00 00
Q ss_pred CCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008182 265 CNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMI 344 (575)
Q Consensus 265 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 344 (575)
++ .. +..+.++. ... .++ |.+...+.........+....+..
T Consensus 197 -------~~----~~-~~~~~~~~---~~~----------------------l~~-~~~~~~~l~~~~~~~~~~~~~~~~ 238 (396)
T TIGR00882 197 -------GA----NA-SAFSLKLA---LEL----------------------FRQ-RKFWMFVLYVVGVACVYDVFDQQF 238 (396)
T ss_pred -------cc----cc-CCCCHHHH---HHH----------------------HcC-CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00 00000000 000 011 111111111111111111111111
Q ss_pred chhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 008182 345 TFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVE 424 (575)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 424 (575)
..+.... ..+.... ....+....+..+...+.....+++ .+|.. +.+.+.++.++.++++......
T Consensus 239 ~~y~~~~-~~~~~~~--~~~~g~~~~~~~i~~~~~~~~~g~l----~~r~g------~~~~l~~~~~l~~l~~~~~~~~- 304 (396)
T TIGR00882 239 ANFFTSF-FATPQQG--TRVFGYVTTMGELLNALIMFCAPLI----INRIG------AKNALLIAGTIMSVRIIGSSFA- 304 (396)
T ss_pred HHHHHHh-ccccccc--hHHHHHHHHHHHHHHHHHHHHHHHH----HHHhc------cchhHHHHHHHHHHHHHHHHhc-
Confidence 1121111 0000000 0011223333444444444444444 34322 2223566666666666554432
Q ss_pred HHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHH-HHHHHHHHHHHHHHHHHh
Q 008182 425 RKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGL-FLTTLSLGFFVSSFLVAV 503 (575)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~lg~~lg~~l~~~ 503 (575)
.+.+++++..++.+++..........+..+..|++.+++..+. ++....+|+.+++.+.|.
T Consensus 305 ------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~ 366 (396)
T TIGR00882 305 ------------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGN 366 (396)
T ss_pred ------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHH
Confidence 3444556667788888777777777788888899999887766 678889999999999998
Q ss_pred hhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHH
Q 008182 504 VKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYL 545 (575)
Q Consensus 504 v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~ 545 (575)
+.+.. +++..|.+.+++.++..++..
T Consensus 367 l~~~~----------------G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 367 MYDSI----------------GFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHhc----------------ccHHHHHHHHHHHHHHHHHHH
Confidence 86532 135667777777766665543
No 69
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.87 E-value=1.4e-19 Score=189.72 Aligned_cols=157 Identities=15% Similarity=0.145 Sum_probs=136.9
Q ss_pred hhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 008182 43 GIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRP 122 (575)
Q Consensus 43 ~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 122 (575)
...+.++.+.+ ++|++..+.+++.+++.++..++.++.|+++||+ |||+++..+.++..++..++.+++
T Consensus 9 ~~~p~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~--------- 77 (377)
T PRK11102 9 MYLPALPVIAA-DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ--------- 77 (377)
T ss_pred HHhccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc---------
Confidence 34566776665 6899999999999999999999999999999999 999999999999999988888762
Q ss_pred CCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHh
Q 008182 123 CKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 202 (575)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~ 202 (575)
+...+++.|++.|++.+...+...+++.|.+++++ |++.+++.+...++|..++|.+++
T Consensus 78 ---------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~ 136 (377)
T PRK11102 78 ---------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPIIGG 136 (377)
T ss_pred ---------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36678899999999999988999999999999888 999999999999999999999999
Q ss_pred hhcccccchhHHHHHHHHHHHHHHHHHhc
Q 008182 203 YIQDEISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 203 ~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
++.+..+|++.|++.++..++..+...+.
T Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (377)
T PRK11102 137 WLLVWFSWHAIFWVLALAAILAAALVFFF 165 (377)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHh
Confidence 99998899999998777666655444433
No 70
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.87 E-value=2e-19 Score=189.98 Aligned_cols=173 Identities=13% Similarity=0.073 Sum_probs=143.8
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
.+-+..+..+....+.....+.+|.+ .+++|.+..+.+++.+.+.++..+++++.|+++||+ |||+.++++.++..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~lp~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~ 81 (392)
T PRK10473 4 FLLCSFALVLLYPAGIDMYLVGLPRI-AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIA 81 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHH
Confidence 34445555556666666555555554 567999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
.+++..++ +...++++|+++|++.+...+...+++.|.+++++ |++..++
T Consensus 82 ~~~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~ 131 (392)
T PRK10473 82 SLLCSLAE------------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSL 131 (392)
T ss_pred HHHHHHhC------------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHH
Confidence 88887662 25668889999999999888889999999999888 9999999
Q ss_pred hhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHh
Q 008182 186 FFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 186 ~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
.+...++|..++|.+++.+.+..+|++.|++.++..++..+....
T Consensus 132 ~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~ 176 (392)
T PRK10473 132 LNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLF 176 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888889999999887766655554433
No 71
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.87 E-value=2.3e-19 Score=191.10 Aligned_cols=387 Identities=14% Similarity=0.070 Sum_probs=224.1
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccch-HHHHHHHHHHHHHHHH
Q 008182 29 LVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGR-YKTIAIFAAVQTLGTG 107 (575)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-~~~~~~~~~~~~~~~~ 107 (575)
.+.+..++..+++-...++++.|+.+++|++..+.|++.+.+.++..+++++.|.++||+ || |+++.++.+..+++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~ 84 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLF 84 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHH
Confidence 355566666677767779999999999999999999999999999999999999999998 65 7788888877777777
Q ss_pred HHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccC--------CCCChHhhhhh
Q 008182 108 MLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQF--------DEKDEKEKTQM 179 (575)
Q Consensus 108 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~--------~~~~~~~~~~r 179 (575)
+..+.++ ...+++.|++.+++.+...+...++..+.. .+.. |
T Consensus 85 ~~~~~~~------------------------~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~------~ 134 (418)
T TIGR00889 85 FAAQVTT------------------------PAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFP------P 134 (418)
T ss_pred HHHHhcC------------------------HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCC------C
Confidence 7666522 555677788888877666665555432222 1112 4
Q ss_pred hhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCC-CchhHHHHHHHHHHHh
Q 008182 180 AYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSG-SPIVHIFQVIVAAIKK 258 (575)
Q Consensus 180 ~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 258 (575)
.+.+| .+|.+++|.+++.+.....|. +|++.+++.++..+..+ ..++.+++++++ .+..+
T Consensus 135 ~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~----------- 195 (418)
T TIGR00889 135 IRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFAL-TLPDIPVAKSTAKMSIKV----------- 195 (418)
T ss_pred eeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHh-cCCCCCCCccccccCHHH-----------
Confidence 44443 578899999998884433343 46665555554444332 223211110000 00000
Q ss_pred ccccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 008182 259 RKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWT 338 (575)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 338 (575)
. ...+..... ++.+.....+..++.......
T Consensus 196 --------------------------~-~~~~~~~~~----------------------k~~~~~~~~~~~~~~~~~~~~ 226 (418)
T TIGR00889 196 --------------------------M-LGLDAFILF----------------------KNKRMAIFFFFSMLLGAPLQI 226 (418)
T ss_pred --------------------------H-hhhhHHHHh----------------------cCCCeeeHHHHHHHHHhHHHH
Confidence 0 000000000 000101111111111111111
Q ss_pred hhhcccchhhhhhcccccccc-ccc-ccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHH
Q 008182 339 TYAQMITFSVEQATTMERSIG-RFQ-IPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVG 416 (575)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~ 416 (575)
.+ .....+..+ ...+.... ++. ...+....+..+..++...+.+++.+|+. +.+.+..+.++.+++
T Consensus 227 ~~-~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g----------~r~~l~~~~~~~~v~ 294 (418)
T TIGR00889 227 TN-IFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFG----------IKKVMLLSLVAWALR 294 (418)
T ss_pred HH-HhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhC----------cHHHHHHHHHHHHHH
Confidence 11 111111111 01010000 000 01122334444444455555555543333 233467777777777
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHH-HHHHHHHH
Q 008182 417 MAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFL-TTLSLGFF 495 (575)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~lg~~ 495 (575)
++.+..... ...+...+++..++.+++++...+....++.+.+|++.||+++|+.+ ...++|..
T Consensus 295 ~~l~~~~~~---------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~ 359 (418)
T TIGR00889 295 FGFFAYGDP---------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSL 359 (418)
T ss_pred HHHHHHcCc---------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHH
Confidence 666554210 01122345567888999999988999999999999999999999997 56789999
Q ss_pred HHHHHHHhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhhhc
Q 008182 496 VSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWY 551 (575)
Q Consensus 496 lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~ 551 (575)
+|+.+.|.+.+..+..+..+ ++..|.+.+++.++..+.++++.++.
T Consensus 360 iGp~l~G~l~~~~g~~~~~~----------~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 360 LGYILSGVMVEKMFAYGTFD----------WQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHhccccCCc----------hHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999886543211112 25667778888777777777776643
No 72
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.86 E-value=1.1e-19 Score=184.23 Aligned_cols=393 Identities=16% Similarity=0.065 Sum_probs=264.8
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHH
Q 008182 20 KTGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFA 99 (575)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~ 99 (575)
++.++|.+++-.+ .+..++....+...+.+++++++|+|+.|.+++..+..+...+.+++-|.+.||+ |.|++..++.
T Consensus 9 k~~~~~~L~~S~~-af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~ 86 (417)
T COG2223 9 KRIARRNLWLSTL-AFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSM 86 (417)
T ss_pred ccchhHHHHHHHH-HHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHH
Confidence 3455666664443 4444444455667788899999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhh
Q 008182 100 AVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQM 179 (575)
Q Consensus 100 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 179 (575)
++..+-.+..+++.+.|+ .+.+++.+++.|++-+ ..+...+.++.+||+++ +
T Consensus 87 ~l~~IP~~~~~~a~~~~~---------------------~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~------q 138 (417)
T COG2223 87 LLLLIPCLGLAFAVTYPS---------------------TWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEK------Q 138 (417)
T ss_pred HHHHHHHHHHHHHccCCc---------------------hHHHHHHHHHHhcccc-eehcccccccccCChhh------h
Confidence 999999999999866443 5678888999999855 45777888999999999 9
Q ss_pred hhhhhhhhhhHHHhHHHHHHHHhhhccccc---chhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHH
Q 008182 180 AYFFSRFFFFISLGTLMAVTVLVYIQDEIS---RSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAI 256 (575)
Q Consensus 180 ~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (575)
|.++|++. ..|+|..+...+++++....+ |+.+-.+..+..+++.+..++..+..++.++..++...
T Consensus 139 G~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~--------- 208 (417)
T COG2223 139 GLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP--------- 208 (417)
T ss_pred hHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch---------
Confidence 99999999 999999999999999999888 99888888877777666666655543332221111110
Q ss_pred HhccccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHH
Q 008182 257 KKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIF 336 (575)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 336 (575)
. +.+.+...+....+..+...+..-
T Consensus 209 -----------------------------------~--------------------~~~~v~~~~~~W~lsllY~~tFG~ 233 (417)
T COG2223 209 -----------------------------------A--------------------QLKAVFSNKDTWLLSLLYFATFGG 233 (417)
T ss_pred -----------------------------------h--------------------HHHHHhcCcchHHHHHHHHHHHHH
Confidence 0 000111111122222222223332
Q ss_pred HHhhhcccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHH
Q 008182 337 WTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVG 416 (575)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~ 416 (575)
++.+......+... +...+ ....+.+....++...+.-|+.+++.||+..+ +...+....++++
T Consensus 234 Fvgfs~~l~~~~~~--~fg~~----~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~----------rv~~~~f~~~~~~ 297 (417)
T COG2223 234 FVGFSAYLPMYLVT--QFGLS----PVTAGLIAFLFPLIGALARPLGGWLSDRIGGR----------RVTLAVFVGMALA 297 (417)
T ss_pred HHHHHHHHHHHHHH--hcCCC----hhhHHHHHHHHHHHHHHHHhccchhhhhccch----------hHHHHHHHHHHHH
Confidence 22222211112111 11111 22233556666777777778888876666554 2255666666666
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHH
Q 008182 417 MAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFV 496 (575)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l 496 (575)
........... +...+....+..++.+++..++-+-..+.++....|+ +.|.+.|+......+|++.
T Consensus 298 ~~~l~~~~~~~------------~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~ 364 (417)
T COG2223 298 AALLSLFLTGF------------GHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFF 364 (417)
T ss_pred HHHHHcccccc------------ccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccc
Confidence 66665542110 0012333334445555566666666777777777765 6889999999999999999
Q ss_pred HHHHHHhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhhhc
Q 008182 497 SSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWY 551 (575)
Q Consensus 497 g~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~ 551 (575)
-|...+...+..+ .....|+++..+.+++.+..+....|.
T Consensus 365 lp~~~g~~~~~tg---------------~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 365 LPLAFGVSLDLTG---------------SYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred hhHHHHHHHHhcc---------------cHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999988766443 135668888888888888887776654
No 73
>PRK10133 L-fucose transporter; Provisional
Probab=99.86 E-value=4.3e-19 Score=190.14 Aligned_cols=154 Identities=18% Similarity=0.202 Sum_probs=122.6
Q ss_pred CcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 008182 23 GWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQ 102 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 102 (575)
+...+..+.++.+.-.+....... +.+.+++++|++..+.+++.+.+.+++.+++++.|+++||+ ||||++.+++.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~-~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDI-LLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 344555555555555555544444 44456889999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 103 TLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
+++.+++..+... .++..++++|+++|+|.|...+..++++.|..++++ |...
T Consensus 102 ~~~~~l~~~~~~a---------------------~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~~~ 154 (438)
T PRK10133 102 ALGAALFWPAAEI---------------------MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFR 154 (438)
T ss_pred HHHHHHHHHHHhc---------------------CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HHHH
Confidence 9999876432111 237789999999999999999999999998765555 6667
Q ss_pred hhhhhhhHHHhHHHHHHHHhhhc
Q 008182 183 FSRFFFFISLGTLMAVTVLVYIQ 205 (575)
Q Consensus 183 ~~~~~~~~~ig~~l~~~i~~~l~ 205 (575)
++.......+|..+++.+++.+.
T Consensus 155 ~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 155 LNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888999999998876543
No 74
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.86 E-value=1.4e-19 Score=191.66 Aligned_cols=179 Identities=13% Similarity=0.018 Sum_probs=131.9
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVG-TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
|.++...+..+.....++. ...+.+.+.+ ++|++.+|.+++.+++.+++.+++++.|++.||+ |.|+++.++.++.+
T Consensus 34 r~l~~s~~~f~~~F~~w~~-~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWML-FSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 5555544444444444443 3444555544 8999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
+.+++.+++.+.+. .++..+++.|++.|++ +...+.....++++||+++ |++++
T Consensus 112 i~~~~~~~a~~~~~-------------------~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~A~ 165 (462)
T PRK15034 112 IPCVWLGIAVQNPN-------------------TPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGSAL 165 (462)
T ss_pred HHHHHHHHHHcccC-------------------CCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHHHH
Confidence 98888887511000 2377899999999998 6677888899999999999 99999
Q ss_pred hhhhhhHHHhHHHHHHHHhhhc-----c-------------cccchhHHHHHHHHHHHHHHHHHhc
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQ-----D-------------EISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~-----~-------------~~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
++.....|+|..+++++.+.+. . ..+|+.++++..+..+++.+..++.
T Consensus 166 Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 166 GINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9987777777776655554432 2 2346666666666555555554444
No 75
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.86 E-value=6e-19 Score=191.07 Aligned_cols=360 Identities=14% Similarity=0.155 Sum_probs=238.9
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.+..+.+..+..+++......-++-++. ++.-|+...+++..+..+-..+..+++|.++||+ .|||+++.+-++.++
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~ 87 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRAL 87 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHH
Confidence 45556667777777777666666666655 4567889999999999999999999999999999 999999999888877
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
..+++++...... .+.+.+++.-++.|++.+...|+..+++.+..|+++ ..++.+
T Consensus 88 ~~~~L~~l~~~~~-------------------~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~a 142 (524)
T PF05977_consen 88 VALLLAVLAFFGL-------------------LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANA 142 (524)
T ss_pred HHHHHHHHHHhCc-------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHH
Confidence 6655554432222 246778888899999999999999999999999988 899999
Q ss_pred hhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCC
Q 008182 185 RFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLP 264 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (575)
+.....|+...+||.++|.+....|-.++|.+.++..++.+..+...+++.+ +++.+.++..+.+...++.
T Consensus 143 l~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~---~~~~~~e~~~~~l~~G~ry------ 213 (524)
T PF05977_consen 143 LNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPP---PSSLPRERFFSALREGLRY------ 213 (524)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc---ccccchhhhhhhHHHHHHH------
Confidence 9999999999999999999998889999999998887776655554443221 1111111111111111111
Q ss_pred CCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHH-HHHHHHHHHHhhhcc
Q 008182 265 CNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLP-IWATTIIFWTTYAQM 343 (575)
Q Consensus 265 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~ 343 (575)
+...+.+...+. .+++..........+
T Consensus 214 ----------------------------------------------------v~~~~~l~~~l~~~~~~~l~~~a~~aLl 241 (524)
T PF05977_consen 214 ----------------------------------------------------VRSSPPLRSVLLRSFLFNLFASAVWALL 241 (524)
T ss_pred ----------------------------------------------------HhcchHHHHHHHHHHHHHHhhhHHHHhh
Confidence 000111111111 111111111111111
Q ss_pred cchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 008182 344 ITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALV 423 (575)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 423 (575)
..+..+ ..+.. ....+.+....+++.++.+.+..+ +.+| .+..+.+..+.++.+++++.+++.
T Consensus 242 -Pl~a~~--~l~~~----a~~yGll~a~~gvGai~Gal~~~~----l~~~------~~~~~lv~~~~~~~a~~~~~lal~ 304 (524)
T PF05977_consen 242 -PLFARD--VLGGG----ASGYGLLLAAFGVGAILGALLLPR----LRRR------LSSRRLVLLASLLFALALLLLALS 304 (524)
T ss_pred -hHHHHH--HhCCc----HHHHHHHHHHHHHHHHHHHHHHHH----hhcc------cCcchhhHHHHHHHHHHHHHHhcc
Confidence 111111 11111 111223334444444444333322 2222 333445667777777777777654
Q ss_pred HHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 008182 424 ERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAV 503 (575)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~ 503 (575)
.+.+..++..++.|++.....+...+.+.+..|+++||+.++++.+....+..+|+++.|.
T Consensus 305 -------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~ 365 (524)
T PF05977_consen 305 -------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGF 365 (524)
T ss_pred -------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2334456678888999999999999999999999999999999999999999999999998
Q ss_pred hhhhc
Q 008182 504 VKKVT 508 (575)
Q Consensus 504 v~~~~ 508 (575)
+.+..
T Consensus 366 la~~~ 370 (524)
T PF05977_consen 366 LADHF 370 (524)
T ss_pred HHHHh
Confidence 87644
No 76
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.85 E-value=5.4e-19 Score=211.73 Aligned_cols=156 Identities=13% Similarity=0.177 Sum_probs=128.6
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCc--hhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPS--ATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
.+.+..+++..++..+...+....+..++...++.+. ...+++.+++.+++.++++++|+++||+ |||++++++.++
T Consensus 8 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~ 86 (1146)
T PRK08633 8 IIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLF 86 (1146)
T ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHH
Confidence 4566666777777777766666667777766666654 3468899999999999999999999999 999999999877
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 102 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
..++.++..++...+ +.+.+++.|+++|++.+...+...++++|++++++ |++
T Consensus 87 ~~~~~~~~~~~~~~~---------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~ 139 (1146)
T PRK08633 87 EVGLTLLIVLAYYLG---------------------WFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LSR 139 (1146)
T ss_pred HHHHHHHHHHHHHHc---------------------cHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------chh
Confidence 776665555442211 37789999999999999999999999999999988 999
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhccc
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQDE 207 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~~ 207 (575)
++++...+.++|.++|+.+++++.+.
T Consensus 140 ~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 140 ANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998765
No 77
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.85 E-value=7.4e-19 Score=185.12 Aligned_cols=337 Identities=10% Similarity=0.054 Sum_probs=202.4
Q ss_pred HHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchH----HHHHHHHHHHHHHHHHH
Q 008182 34 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRY----KTIAIFAAVQTLGTGML 109 (575)
Q Consensus 34 ~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~----~~~~~~~~~~~~~~~l~ 109 (575)
.++-.+++..+.+.+|.|++ ++|.|..+.|++.+++.+...+++++.|.++||+ ||+ +.+.+...+.. ....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~--~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLFA--VAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHHH--HHHH
Confidence 45555666667788999996 5799999999999999999999999999999999 984 33322221111 1111
Q ss_pred HHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhh
Q 008182 110 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF 189 (575)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 189 (575)
..+ ++.+.+++.|++.+++.+...|...++..++ +++ |++.++.....
T Consensus 89 ~~~------------------------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~------~~~a~~~~~~~ 136 (382)
T PRK11128 89 FGA------------------------HSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQ------IGLDYGKVRLW 136 (382)
T ss_pred Hhc------------------------ccHHHHHHHHHHHHHHHcccccHHHHHHHHH--Hhh------ccCCcchHHHH
Confidence 111 2367778899999999888888888777765 334 78888888888
Q ss_pred HHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCCCCccc
Q 008182 190 ISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGM 269 (575)
Q Consensus 190 ~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (575)
.++|..+||.+++++.+.+||+..|++.++..++..+.. +..++. ++++++.+
T Consensus 137 ~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~----------------------- 189 (382)
T PRK11128 137 GSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQ-LLRPTI---MPQGESRQ----------------------- 189 (382)
T ss_pred HHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HccCCC---CCcccccc-----------------------
Confidence 999999999999999999999999988776544443332 222211 11100000
Q ss_pred cccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHH-HHHHHHHHHHhhhcccchhh
Q 008182 270 LYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLP-IWATTIIFWTTYAQMITFSV 348 (575)
Q Consensus 270 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~ 348 (575)
+ .++...++ .+..+.|.++..+. .++....+...+... ..+.
T Consensus 190 --------~--~~~~~~~~--------------------------~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~ 232 (382)
T PRK11128 190 --------Q--ESAGWPAW--------------------------KALLKEPTVWRFLLCVSLLQGSHAAYYGFS-AIYW 232 (382)
T ss_pred --------c--cccccchH--------------------------HHHHcChhHHHHHHHHHHHHHHhHhHHHHH-HHHH
Confidence 0 00000000 00111122222111 111111111111111 1111
Q ss_pred hhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008182 349 EQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRL 428 (575)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 428 (575)
.+ .+.+.. ..+.+..+..+..++...+.+ ++.+|+ +..+.+..+.++.+++++.+...
T Consensus 233 ~~-~g~s~~------~~g~~~~~~~~~~~~~~~~~g----~l~~r~------~~~~~l~~~~~~~~~~~~~~~~~----- 290 (382)
T PRK11128 233 QA-AGYSAS------TIGYLWSLGVVAEVLIFAFSN----RLFRRW------SARDLLLLSAICGVVRWGLMGST----- 290 (382)
T ss_pred HH-CCCCHh------HHHHHHHHHHHHHHHHHHHHH----HHHHHC------CHHHHHHHHHHHHHHHHHHHHhh-----
Confidence 11 111111 112223333333333333333 334442 33444666777777776665543
Q ss_pred HHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHH-HHHHHHHHHHHHHHHhhhhh
Q 008182 429 SVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFL-TTLSLGFFVSSFLVAVVKKV 507 (575)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~lg~~lg~~l~~~v~~~ 507 (575)
.+.+.+++..++.++++++..+....+..+. |++.+++.+++++ ..+.+|..+|+.+.|.+.+.
T Consensus 291 --------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~ 355 (382)
T PRK11128 291 --------------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH 355 (382)
T ss_pred --------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2334456678888999999999999988887 5555789999886 55678889999999988753
No 78
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.85 E-value=7.7e-20 Score=190.80 Aligned_cols=167 Identities=15% Similarity=0.096 Sum_probs=137.7
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
.++..++..+.....++...+.+|.++++++|++..+.+++.+.+.++..++++++|+++||+ |||++++++.++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIP 80 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 456677777777777777778888789999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
.+++++++. +...+++.|+++|++.+.. +...++++|++++++ |++..++
T Consensus 81 ~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~------r~~~~~~ 130 (366)
T TIGR00886 81 CLWAGLAVQ-----------------------SYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKI------QGTALGL 130 (366)
T ss_pred HHHHHHHhh-----------------------hHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhh------hhHHHHH
Confidence 988887730 3677889999999986654 556788999999888 9999999
Q ss_pred hhhhHHHhHHHHHHHHhhhcc----------cccchhHHHH-HHHHHHH
Q 008182 186 FFFFISLGTLMAVTVLVYIQD----------EISRSVGYGI-CSVAMFM 223 (575)
Q Consensus 186 ~~~~~~ig~~l~~~i~~~l~~----------~~~~~~~f~~-~~~~~~~ 223 (575)
.....++|..+++.+++.+.. ..+|++.|++ .++...+
T Consensus 131 ~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 179 (366)
T TIGR00886 131 AAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLL 179 (366)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHH
Confidence 888888888888777766654 2479999943 3444333
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.85 E-value=5.4e-19 Score=211.47 Aligned_cols=337 Identities=11% Similarity=0.030 Sum_probs=194.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH--HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchh
Q 008182 61 ATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV--QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQ 138 (575)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (575)
...++..+++.+.+.++++++|+++||+ |||+++...... ......+.++.. .+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~-----------------------~s 107 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL-----------------------NS 107 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hh
Confidence 4567788899999999999999999999 999976442222 222222222210 13
Q ss_pred hHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHH
Q 008182 139 MGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICS 218 (575)
Q Consensus 139 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~ 218 (575)
.+.++++|+++|++.+...|+..+++.|++++++ |++++++..++.++|.++||.++|++.+..+|++.|+..+
T Consensus 108 ~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~ 181 (1140)
T PRK06814 108 VPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLM 181 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 7789999999999999999999999999999988 9999999999999999999999999999899999985554
Q ss_pred HHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCCCCccccccCCcccccccCCcchhhhhHHhhhhcC
Q 008182 219 VAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEG 298 (575)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 298 (575)
+..++++++.+...+. +..++.........+.....++
T Consensus 182 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----------------------------------------- 219 (1140)
T PRK06814 182 GIAVLGWLASLFIPKT-GNAAPDLKIDRNIIRSTITLLK----------------------------------------- 219 (1140)
T ss_pred HHHHHHHHHHhhCCCC-CCCCCCCeeccchHHHHHHHHH-----------------------------------------
Confidence 4444444443333221 1111100000000000000000
Q ss_pred CcCCCCCCCCCccccchhhhhHHHHHH-HHHHHHHHHHHHHhhhcccchhhhhhcccccccccccccccccccchhHHHH
Q 008182 299 DFEAGSTPNPWKLCSVTSVEEVKMVAR-LLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAIL 377 (575)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (575)
.....+.+.. .+..++..........+++ .+..+..+.+ ....+.+.....++.+
T Consensus 220 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~------~~~~g~~~~~~~~g~~ 275 (1140)
T PRK06814 220 -----------------YAKADKRIWLAILGISWFWLVGAVVLSQLP-LLAKETLGGD------ENVATLFLAVFSVGVA 275 (1140)
T ss_pred -----------------HHhcCchHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHcCCc------hHHHHHHHHHHHHHHH
Confidence 0001111111 1111111112212222222 1211111111 1112334455555555
Q ss_pred HHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC---CCCCccceehhhHHHHHH
Q 008182 378 ITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGL---TTATLPVSVFLLIPQFFL 454 (575)
Q Consensus 378 i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~~l 454 (575)
+...+.+++. ++... .+.+..+.++.+++.+.+.+.... ........ ..-....+.+.+++..++
T Consensus 276 ig~~~~g~l~----~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (1140)
T PRK06814 276 VGSFLASKLS----EGRIT------LLYVPIGALLMGLFGLDLAFASSS--VPAEPAQLKSILVFLSKRHGWRILIDLFG 343 (1140)
T ss_pred HHHHHHHHHh----CCcee------eeeehHHHHHHHHHHHHHHhcccc--cccccccccchhhhhcccccHHHHHHHHH
Confidence 5555555543 22111 111333333333333322221000 00000000 000001234456677888
Q ss_pred HHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008182 455 VGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVK 505 (575)
Q Consensus 455 ~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~ 505 (575)
+|++.++..+...+++.+.+|++.||+++|++++.+.+|..+++.+.+.+.
T Consensus 344 ~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 344 LAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred HHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999998875
No 80
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.85 E-value=2.5e-18 Score=186.91 Aligned_cols=178 Identities=13% Similarity=0.108 Sum_probs=140.4
Q ss_pred CcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcc----cchHHH-HHH
Q 008182 23 GWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF----LGRYKT-IAI 97 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Gr~~~-~~~ 97 (575)
.+|..+.++.+.+...+..+.....++.++.+ .|.+.++.+...... .. .++.+++|.++||+ +||||. +++
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~~~~-~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~ 86 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFSLVG-QA-YVFKFLWSPLMDRYTPPFLGRRRGWLLA 86 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHH-HH-HHHHHHHHHHHHcccccCCCCchHHHHH
Confidence 45567778888888888888888888999775 599999998863322 22 26899999999995 288886 556
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhh
Q 008182 98 FAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKT 177 (575)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 177 (575)
+.+..+++...+++.. |. .+...+.+.+++.+++.+...+...++..|++|+++
T Consensus 87 ~~i~~~~~~~~~a~~~--~~-------------------~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~----- 140 (491)
T PRK11010 87 TQLLLLVAIAAMGFLE--PG-------------------TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE----- 140 (491)
T ss_pred HHHHHHHHHHHHHHcC--Cc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh-----
Confidence 6666667766666642 11 346778888999999989888999999999999888
Q ss_pred hhhhhhhhhhhhHHHhHHHHHHHHhhhcc-cccchhHHHHHHHHHHHHHHHHHh
Q 008182 178 QMAYFFSRFFFFISLGTLMAVTVLVYIQD-EISRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 178 ~r~~~~~~~~~~~~ig~~l~~~i~~~l~~-~~~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
|+++.++...+.++|..+++.+.+++.+ ..|||.+|++.++..++..+..++
T Consensus 141 -rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 141 -RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988 469999999988776665554443
No 81
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.84 E-value=7.6e-19 Score=188.12 Aligned_cols=357 Identities=12% Similarity=0.104 Sum_probs=217.4
Q ss_pred HHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcc---cchHH-HHHHHHHHHHHHHHHH
Q 008182 34 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF---LGRYK-TIAIFAAVQTLGTGML 109 (575)
Q Consensus 34 ~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Gr~~-~~~~~~~~~~~~~~l~ 109 (575)
.+...+.+..+..+++.|+++++|+++.++|.+.++..+...+..|+.|+++||. +|||| .++++....+++.+++
T Consensus 8 ~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~ 87 (437)
T TIGR00792 8 DFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLL 87 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHH
Confidence 3445566666778899999999999999999999999999999999999999983 38855 5667777777777777
Q ss_pred HHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCC-CChHhhhhhhhhhhhhhh
Q 008182 110 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDE-KDEKEKTQMAYFFSRFFF 188 (575)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~ 188 (575)
...++.+. ......+++.+++.+++.+.......++..|..++ ++ |++..++...
T Consensus 88 ~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~------R~~~~~~~~~ 143 (437)
T TIGR00792 88 FTTPDFSA------------------TGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRE------RESLSTFRRF 143 (437)
T ss_pred HhCCCCCc------------------chHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHH------HHHHHHHHHH
Confidence 65421110 12245566777788888888777778888888754 44 8899998888
Q ss_pred hHHHhHHHHHHHHhhhc-------ccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccc
Q 008182 189 FISLGTLMAVTVLVYIQ-------DEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKM 261 (575)
Q Consensus 189 ~~~ig~~l~~~i~~~l~-------~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (575)
..++|+.+++.+.+.+. +..+|++.+.+.+++.++..+...+..++.+++.+++++
T Consensus 144 ~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~----------------- 206 (437)
T TIGR00792 144 GATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIE----------------- 206 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccc-----------------
Confidence 88888877766655543 245799998887777666555544433322110000000
Q ss_pred cCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhh
Q 008182 262 DLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYA 341 (575)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 341 (575)
++.+..+.. +...+.|.+...+...+.....+....
T Consensus 207 ----------------------~~~~~~~~~----------------------~~l~~~~~~~~~~~~~~~~~~~~~~~~ 242 (437)
T TIGR00792 207 ----------------------KKLSLKQIF----------------------KALFKNDQLLILCLAYLFYNLAFNIKN 242 (437)
T ss_pred ----------------------cCCCHHHHH----------------------HHHhCCHHHHHHHHHHHHHHHHHHHHc
Confidence 000000000 000111222211111111111111111
Q ss_pred cccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHH
Q 008182 342 QMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAA 421 (575)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 421 (575)
.....+..+ ... + ....+.+..+..+..++..++..++.+|+.+ .+.+..+.++.+++++.+.
T Consensus 243 ~~~~~~~~~--~~~-~----~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~----------~~~~~~~~~~~~~~~~~~~ 305 (437)
T TIGR00792 243 GVQVYYFTY--VLG-D----PELFSYMGSIAIVAGLIGVLLFPRLVKKFGR----------KILFAGGILLMVLGYLIFF 305 (437)
T ss_pred chhheeEee--ecC-C----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc----------HHHHHHHHHHHHHHHHHHH
Confidence 111111111 011 0 0011223334455556666666665443332 2335667777677666554
Q ss_pred HHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCC-------cchhHHHHHHHHHHHHHHH
Q 008182 422 LVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSP-------KGMKTMSTGLFLTTLSLGF 494 (575)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~~~~lg~ 494 (575)
+. +.+.+..++..++.+++.+..++..+++..+..| ++.+|++.|++++...+|.
T Consensus 306 ~~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~ 367 (437)
T TIGR00792 306 FA------------------GSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQ 367 (437)
T ss_pred Hc------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHH
Confidence 42 1122344556677888888888888888887765 5678999999999999999
Q ss_pred HHHHHHHHhhhhhcCC
Q 008182 495 FVSSFLVAVVKKVTGS 510 (575)
Q Consensus 495 ~lg~~l~~~v~~~~~~ 510 (575)
.+++.+.+.+.+..+.
T Consensus 368 ~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 368 ALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 9999999998876543
No 82
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.83 E-value=1.9e-18 Score=181.35 Aligned_cols=158 Identities=15% Similarity=0.154 Sum_probs=117.5
Q ss_pred HHHHHhhhcCC--CCchhhHHHHHH-----HHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccC
Q 008182 47 NLVTYLVGTMH--LPSATSANIVTD-----FMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLR 119 (575)
Q Consensus 47 ~l~~yl~~~l~--~~~~~~~~~~~~-----~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 119 (575)
....++.++.. .++++.+.+.+. ..+...+++++.|+++||+ ||||+++++.++..++.++++++++.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~- 91 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYATI- 91 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhhh-
Confidence 45556665543 445555554443 2233346889999999999 99999999999999999988887432110
Q ss_pred CCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHH
Q 008182 120 PRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVT 199 (575)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~ 199 (575)
.......+++.|+++|++.+...+...++++|.+++++ |++..++...+..+|..+++.
T Consensus 92 ---------------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~i~~~ 150 (394)
T TIGR00883 92 ---------------GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLLLAAL 150 (394)
T ss_pred ---------------HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHHHHHH
Confidence 00012357889999999999999999999999999988 999999999999999999988
Q ss_pred HHhhhc--------ccccchhHHHHHHHHHHHHHHH
Q 008182 200 VLVYIQ--------DEISRSVGYGICSVAMFMAIII 227 (575)
Q Consensus 200 i~~~l~--------~~~~~~~~f~~~~~~~~~~~~~ 227 (575)
++..+. +..+||++|++.++..+++...
T Consensus 151 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 151 TVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred HHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 776653 3568999998877665544433
No 83
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.83 E-value=8.9e-19 Score=182.47 Aligned_cols=333 Identities=12% Similarity=0.147 Sum_probs=205.6
Q ss_pred HHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCC
Q 008182 41 TMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRP 120 (575)
Q Consensus 41 ~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 120 (575)
++.....+.+.+.+++|++.++.+++.+.+.++..++.++.|+++||+ ||||++.++.++..++.+.. .+ +
T Consensus 15 ~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~---~---- 85 (355)
T TIGR00896 15 ALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA---P---- 85 (355)
T ss_pred ccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh---c----
Confidence 333334444556779999999999999999999999999999999999 99999999988877776665 33 2
Q ss_pred CCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHH
Q 008182 121 RPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTV 200 (575)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i 200 (575)
+...+++.|++.|++.+...+..+..+.|.++ ++ |++++++++...++|..+++.+
T Consensus 86 -----------------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~i~~~~ 141 (355)
T TIGR00896 86 -----------------GTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR------VGLMTGLYSMALMGGAALAAAA 141 (355)
T ss_pred -----------------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch------hhHHHHHHHHHHHHHHHHHHHH
Confidence 25667899999999999887888888888885 46 8999999999999999999999
Q ss_pred Hhhhcccc--cchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCCCCccccccCCcccc
Q 008182 201 LVYIQDEI--SRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEAS 278 (575)
Q Consensus 201 ~~~l~~~~--~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (575)
++.+.+.. +||+.|.+.++..++....+. ++.+++++++.+.
T Consensus 142 ~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--------------------------------- 185 (355)
T TIGR00896 142 TVPLAQHSGGHWQQALAWWALPALLALLAWI---PQVRRRVAANQTT--------------------------------- 185 (355)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh---hhhccccCCCCCC---------------------------------
Confidence 98887654 389888766554433322221 1111111000000
Q ss_pred cccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhccccccc
Q 008182 279 RIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSI 358 (575)
Q Consensus 279 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (575)
+. ..+++. .++.+.........+....++....+.+..+ . ..+.+..
T Consensus 186 -----~~--------------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~-~-~~g~~~~- 232 (355)
T TIGR00896 186 -----TR--------------------LTPVRI-----WRSPLAWQVTVFFGLQSGLYYSLIGWLPAIL-I-SHGASAA- 232 (355)
T ss_pred -----CC--------------------CCCchh-----hcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HcCCCHH-
Confidence 00 000000 0111111111111111222222222222111 1 1111111
Q ss_pred ccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Q 008182 359 GRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTT 438 (575)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (575)
..+.+.....+..++..++.+++. +|.++ ..+.+.++.++.+++.+.+.+..
T Consensus 233 -----~~g~~~~~~~~~~i~~~~~~g~l~----dr~~~-----~~~~~~~~~~~~~~~~~~~~~~~-------------- 284 (355)
T TIGR00896 233 -----TAGSLLALMQLAQAASALLIPALA----RRVKD-----QRGIVAVLAVLQLVGLCGLLFAP-------------- 284 (355)
T ss_pred -----HHHHHHHHHHHHHHHHHHhHHHHH----hhhcc-----chHHHHHHHHHHHHHHHHHHHhh--------------
Confidence 123344445555555555555553 33311 11224556666666666555431
Q ss_pred CCccceehhhHHHHHHHHHHHHHhhhhhhheecccC-CcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 008182 439 ATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKS-PKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTG 509 (575)
Q Consensus 439 ~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~-P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~ 509 (575)
.+..+ ...++.|++.+..+|...+.+.+.. +++.+|..+++.+....++..+++.+.|.+.+..+
T Consensus 285 ----~~~~~--~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 285 ----MHGLW--AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred ----hhHHH--HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11111 2456778999888888777766554 46778999999998889999999999999876554
No 84
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.82 E-value=1.1e-17 Score=176.53 Aligned_cols=397 Identities=14% Similarity=0.079 Sum_probs=235.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHH
Q 008182 63 SANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVL 142 (575)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (575)
-+.+++++.+++++++.++|+++||+ |||..++++.++..++.++..++...+. ..++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~~~---------------------~e~l 119 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSAPS---------------------FEML 119 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHhhh---------------------HHHH
Confidence 34678889999999999999999999 9999999999999998888888755444 7889
Q ss_pred HHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHH-hhhc-ccccchhHHHHHHHH
Q 008182 143 YIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL-VYIQ-DEISRSVGYGICSVA 220 (575)
Q Consensus 143 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~-~~l~-~~~~~~~~f~~~~~~ 220 (575)
+++|++.|+..|......+-++.|..|++. ||..-....++..+|..++..++ ..+. ..-.|++.+.+..+.
T Consensus 120 i~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~ 193 (485)
T KOG0569|consen 120 ILGRLIVGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIP 193 (485)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHH
Confidence 999999999999999999999999999999 99999999999999999995554 3343 334599888888887
Q ss_pred HHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCc
Q 008182 221 MFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDF 300 (575)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 300 (575)
.++.++.+.+..+.-+.--.++++.++..+. ++. ++..++++..++ +......+.+.
T Consensus 194 ~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~s----l~~-----------y~G~~~~~~~~e--------~~~~e~~~~~~ 250 (485)
T KOG0569|consen 194 ALLQLALLPFLPESPKYLLIKKGDEEEARKA----LKF-----------YRGKEDVEAEIE--------EMLREIEEEEL 250 (485)
T ss_pred HHHHHHHHhcCCCCcchHHHHcCCHHHHHHH----HHH-----------HhCCCcchhHHH--------HHHHHHHHhcc
Confidence 7777777666543211100111122211111 111 001000000000 00000000000
Q ss_pred CCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhcccchhh--hhhccccccccccccc-ccccccchhHHHH
Q 008182 301 EAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSV--EQATTMERSIGRFQIP-AGSLTVFFVSAIL 377 (575)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 377 (575)
...+....++..+.++ .++.....+.+ ...+|+.+... .+....-.+. |+... ....+....+..+
T Consensus 251 ~~~~~~sl~~~~~~~~--lR~~~~i~~~v--------~~~qq~sGi~ai~~Yst~i~~~a-G~~~~~a~~an~~~g~v~~ 319 (485)
T KOG0569|consen 251 EKKKQISLRQLLKNPT--LRRPLLIGIVV--------SFAQQFSGINAIFFYSTSIFKTA-GFTPEEAQYANLGIGIVNL 319 (485)
T ss_pred ccccCCcHHHHhcCcc--hhHHHHHHHHH--------HHHHHhcCcceeHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHH
Confidence 0000011111111111 11111111111 11222222110 0000000000 11111 1122333333344
Q ss_pred HHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehh--hHHHHHHH
Q 008182 378 ITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFL--LIPQFFLV 455 (575)
Q Consensus 378 i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--li~~~~l~ 455 (575)
+..-+...+++++.|| ..++.+..++.+..+.+.......+.. . ++.+ .+...++.
T Consensus 320 ~~t~~~~~lid~~gRR----------pLll~~~~~~~~~~~~~~~~~~l~~~~-----------~-~~~~y~~i~~~~~~ 377 (485)
T KOG0569|consen 320 LSTLVSPFLIDRLGRR----------PLLLISLSLMAVALLLMSIALFLSNSF-----------G-SWLSYLCIAAIFLF 377 (485)
T ss_pred HHHHHHHHHHHhcCCc----------HHHHHHHHHHHHHHHHHHHHHHHHHHh-----------h-hHHHHHHHHHHHHH
Confidence 4444444454444443 236667777777776666554432211 1 1211 23444444
Q ss_pred HHHHHHh-hhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcccchhHHHHHHH
Q 008182 456 GAGEAFI-YTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLA 534 (575)
Q Consensus 456 g~g~~~~-~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a 534 (575)
.++..+. .|..+-+.+|.+|++.|..++++....+.+++++-......+.+..+ .++|+++.
T Consensus 378 ~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g-----------------~~~filF~ 440 (485)
T KOG0569|consen 378 IISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG-----------------PYVFILFV 440 (485)
T ss_pred HHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------------chhhHHHH
Confidence 4444444 58889999999999999999999999999999999999888765443 36788889
Q ss_pred HHHHHHHHHHHhhhhhcCCCCCcccc
Q 008182 535 ILSIINLVIYLICAVWYKPKKPKAGI 560 (575)
Q Consensus 535 ~l~~v~~~~~~~~~~~~~~~~~~~~~ 560 (575)
+.+++..+..+...+++|+|+..+..
T Consensus 441 i~~~~~~i~~~~~lPETkgr~~~eI~ 466 (485)
T KOG0569|consen 441 IPLAIFLIYLYRYLPETKGRTPYEII 466 (485)
T ss_pred HHHHHHHHHHHHhCcccCCCCHHHHH
Confidence 99999999899999999988866543
No 85
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.82 E-value=2.7e-17 Score=174.67 Aligned_cols=173 Identities=14% Similarity=0.201 Sum_probs=139.4
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
.++.++...+.-.+.. ++...+.+.+++++|++..+.+++.+.+.+++.++.++.|++.||+ |||+++.+++++++++
T Consensus 4 ~~~~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g 81 (410)
T TIGR00885 4 PFALITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALG 81 (410)
T ss_pred HHHHHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 3445555555555444 4444555666889999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
.++...+... .++..+++.|++.|+|.|...+..++++.+..|+++ |++..++
T Consensus 82 ~~l~~~~~~~---------------------~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~ 134 (410)
T TIGR00885 82 AFLFWPAAEI---------------------MNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNL 134 (410)
T ss_pred HHHHHHHHhh---------------------ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHH
Confidence 8876554221 237788999999999999999999999999988887 8888999
Q ss_pred hhhhHHHhHHHHHHHHhhhccc--------------------------ccchhHHHHHHHHHHHHHHH
Q 008182 186 FFFFISLGTLMAVTVLVYIQDE--------------------------ISRSVGYGICSVAMFMAIII 227 (575)
Q Consensus 186 ~~~~~~ig~~l~~~i~~~l~~~--------------------------~~~~~~f~~~~~~~~~~~~~ 227 (575)
.+...++|..++|.+++.+... .+||++|++.+++.++..+.
T Consensus 135 ~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 135 AQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998877422 35999998877655544333
No 86
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.81 E-value=5.6e-17 Score=172.03 Aligned_cols=169 Identities=13% Similarity=0.095 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcc----cchHH-HHHHHHHHHHH
Q 008182 30 VLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF----LGRYK-TIAIFAAVQTL 104 (575)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Gr~~-~~~~~~~~~~~ 104 (575)
++...+...+.+.-....+|.|++++ |++.++.|++...... .+..+++|+++||+ +|||| .++++.++.++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 44556666666666778899999965 9999999999776665 69999999999997 26765 67777888877
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
+..++++... ..+.+.+++..++.++..+...+...+++.|++|+++ |+++.+
T Consensus 81 ~~~~l~~~~~---------------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~ 133 (402)
T PRK11902 81 SIAAMAFCPP---------------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAA 133 (402)
T ss_pred HHHHHHhcCc---------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHH
Confidence 7777666521 1235556666667778888888999999999999988 999999
Q ss_pred hhhhhHHHhHHHHHHHHhhhccc-ccchhHHHHHHHHHHHHHHHH
Q 008182 185 RFFFFISLGTLMAVTVLVYIQDE-ISRSVGYGICSVAMFMAIIIF 228 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~~-~~~~~~f~~~~~~~~~~~~~~ 228 (575)
+...+.++|..+++.+++++.+. .|||..|++.++..++..+..
T Consensus 134 ~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~ 178 (402)
T PRK11902 134 VKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT 178 (402)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888875 599999999887665554443
No 87
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.80 E-value=8.7e-17 Score=175.94 Aligned_cols=400 Identities=13% Similarity=0.118 Sum_probs=225.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHH
Q 008182 62 TSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGV 141 (575)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (575)
+.+++.+.+.++..++++++|+++|++ |||++++++.+++.+|.++++++. +..+
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~------------------------~~~~ 144 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAP------------------------SWYQ 144 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhh------------------------hHHH
Confidence 458999999999999999999999999 999999999999999999999983 3888
Q ss_pred HHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhccc--ccchhHHHHHHH
Q 008182 142 LYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDE--ISRSVGYGICSV 219 (575)
Q Consensus 142 ~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~--~~~~~~f~~~~~ 219 (575)
++++|++.|+|.|......+.+++|..|++. |+...+..+...++|..++. +.++..+. .+||..+++..+
T Consensus 145 l~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~-~~~~~~~~~~~~Wr~~~~~~~i 217 (513)
T KOG0254|consen 145 LIVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGY-CINYGTSKVYAGWRIPLGLALI 217 (513)
T ss_pred HHHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHH-HHhhhhccCCccHHHHHHHHHH
Confidence 9999999999999999999999999999988 99999999999999999995 44554443 489988888777
Q ss_pred HHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCC
Q 008182 220 AMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGD 299 (575)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 299 (575)
..++..+.+++ .|+.++.--+.....+..+.+..... .. +++ ...+...+...... +..
T Consensus 218 ~~~~~~~~~~~-~pesp~~L~~~g~~~~a~~~l~~l~g---~~-~~~---------------~~~~~~~~~~~~~~-~~~ 276 (513)
T KOG0254|consen 218 PAVILALGMLF-LPESPRWLIEKGRLEEAKRSLKRLRG---LS-PED---------------VEVELELLKIKLLV-EAE 276 (513)
T ss_pred HHHHHHHHHHh-CCCChHHHHHcCChHHHHHHHHHHhC---CC-Ccc---------------hHHHHHHHHHHHHH-hhh
Confidence 66665555333 33211111111112221111111111 00 000 00000000000000 000
Q ss_pred cCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhcccccccccccccccccccchhHHHHHH
Q 008182 300 FEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILIT 379 (575)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 379 (575)
..+....|..+.. ...+|+....+.+..++.. ..++. ...|..+. .... +...+......+..+...+.
T Consensus 277 --~~~~~~~~~~l~~--~~~~~~~~i~~~l~~fqq~--tG~~~-~~~Y~~~i--f~~~--g~~~~~~~~~~~~~~v~~~~ 345 (513)
T KOG0254|consen 277 --VAEGKASWGELFS--PKVRKRLIIGLLLQLFQQL--TGINY-VFYYSTTI--FKSA--GLKSDTFLASIILGVVNFLG 345 (513)
T ss_pred --cccccccHHHhcC--cchHHHHHHHHHHHHHHHH--hCCce-EEeehHHH--HHhc--CCCCchHHHHHHHHHHHHHH
Confidence 0000001111111 1122222222222111111 11111 11111111 1111 11111112222223333333
Q ss_pred HHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHH-HHHHHHH
Q 008182 380 LAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQ-FFLVGAG 458 (575)
Q Consensus 380 ~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~-~~l~g~g 458 (575)
..+...+++++.|| ..+..|.+.+.+++++++.......+. .+......++.+.. .+.....
T Consensus 346 t~~~~~lvd~~gRr----------~lll~s~~~m~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~v~~f 408 (513)
T KOG0254|consen 346 TLVATYLVDRFGRR----------KLLLFGAAGMSICLVILAVVGVFALYY-------PNSSKGAGWLAIVFLCLFIFSF 408 (513)
T ss_pred HHHHHHHHHHhccH----------HHHHHhHHHHHHHHHHHHHHHHHhccC-------CCcccchhHHHHHHHHHHHHHH
Confidence 33334555555444 337888889999988888664321100 00001112222222 2333333
Q ss_pred HHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHH
Q 008182 459 EAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSI 538 (575)
Q Consensus 459 ~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~ 538 (575)
.....|..+.+..|.+|.+.|+++.++....+.+.+.+-...........+ ....|...++.+.
T Consensus 409 ~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~----------------~~~~f~~f~~~~~ 472 (513)
T KOG0254|consen 409 AIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG----------------IGGTFGYFGGICL 472 (513)
T ss_pred hcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc----------------ccchHHHHHHHHH
Confidence 333447777888999999999999999999988888777666554432110 1234555666666
Q ss_pred HHHH-HHHhhhhhcCCCCCcc
Q 008182 539 INLV-IYLICAVWYKPKKPKA 558 (575)
Q Consensus 539 v~~~-~~~~~~~~~~~~~~~~ 558 (575)
+... ..+++.++++.++.++
T Consensus 473 ~~~~~fv~~~~pETkg~slee 493 (513)
T KOG0254|consen 473 LSLIIFVFFFVPETKGLTLEE 493 (513)
T ss_pred HHHHHHheEEcccCCCCcHHH
Confidence 6666 6778889988887664
No 88
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.80 E-value=1.7e-17 Score=172.79 Aligned_cols=160 Identities=13% Similarity=0.108 Sum_probs=120.8
Q ss_pred HHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcc----cchHHHH-HHHHHHHHHHHHHHHHHhhhcccC
Q 008182 45 AVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF----LGRYKTI-AIFAAVQTLGTGMLAMVTKLRQLR 119 (575)
Q Consensus 45 ~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Gr~~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 119 (575)
.....+.+.+++|+|.++.++.... .+...+ .++.|.++||+ +||||.+ +.+.++.++....+++...
T Consensus 7 ~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~----- 79 (356)
T TIGR00901 7 VGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP----- 79 (356)
T ss_pred HHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc-----
Confidence 3444444555789999999999755 333334 89999999997 4899975 5666666666666655421
Q ss_pred CCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHH
Q 008182 120 PRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVT 199 (575)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~ 199 (575)
..+...+....++.+++.+...+...+++.|++|+++ |+++.++...+.++|..+++.
T Consensus 80 ----------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~ 137 (356)
T TIGR00901 80 ----------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGMLLSGS 137 (356)
T ss_pred ----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHHHHHH
Confidence 1235556666667778888888999999999999888 999999999999999999999
Q ss_pred HHhhhccccc--------chhHHHHHHHHHHHHHHHHHhcCc
Q 008182 200 VLVYIQDEIS--------RSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 200 i~~~l~~~~~--------~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
+++++.+..+ ||.+|++.++..+++.+..++..|
T Consensus 138 l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~ 179 (356)
T TIGR00901 138 LALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAK 179 (356)
T ss_pred HHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999988888 999999888876665555444333
No 89
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.79 E-value=2.6e-16 Score=167.99 Aligned_cols=438 Identities=15% Similarity=0.137 Sum_probs=253.7
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhc----ccchHHHHHHH-HH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADT----FLGRYKTIAIF-AA 100 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr----~~Gr~~~~~~~-~~ 100 (575)
.++.+..+.+...+++-...+++++|+ +++|.+..+.+.+..+..+...+.+|+.|+++|| + ||||.++++ .+
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~ 82 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHH
Confidence 456677777777888777778888886 5799999999999999999999999999999995 7 999998875 55
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhh
Q 008182 101 VQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA 180 (575)
Q Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 180 (575)
...++.++++++.+...+.. + . ............+.++..+..++.....+...++++|.+|+++++ ++
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~----~--~-~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~----~~ 151 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFG----D--N-LDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR----TR 151 (477)
T ss_pred HHHHHHHHHHhCchhhhhcc----c--c-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH----HH
Confidence 56666677766533211000 0 0 000000011133444555556677777788899999999988732 46
Q ss_pred hhhhhhhhhHHHhHHHHHHHHhhh--cccc-------------cchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCch
Q 008182 181 YFFSRFFFFISLGTLMAVTVLVYI--QDEI-------------SRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPI 245 (575)
Q Consensus 181 ~~~~~~~~~~~ig~~l~~~i~~~l--~~~~-------------~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (575)
.+.++.....++|..+|+.++++. .+.+ +.+..|++.++..++..++.++..++.+..++++.+.
T Consensus 152 ~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~ 231 (477)
T TIGR01301 152 IANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFIN 231 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchh
Confidence 789999999999999999988765 2111 5688999888877777776666555432211110000
Q ss_pred hHHHHHHHHHHHhccccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHH
Q 008182 246 VHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVAR 325 (575)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (575)
. .++ ++ +. ......+.+.-... + .--|.+.+
T Consensus 232 ~-----------------------~~~--~~-~~--~~~~~~~~~i~~~~-----------------~----~mP~~m~~ 262 (477)
T TIGR01301 232 S-----------------------EAA--PP-SK--HGEEAFFGELFGAF-----------------K----YLPRPVWI 262 (477)
T ss_pred h-----------------------hcc--cc-cc--cchhhhHHHHHHHH-----------------H----HCCHHHHH
Confidence 0 000 00 00 00000000000000 0 00123334
Q ss_pred HHHHHHHHHHHHHhhhcccchhhhhhcccccccc--cc--ccccc-ccccchhHHHHHHHHHHhHHHhhhhhhccCCCCC
Q 008182 326 LLPIWATTIIFWTTYAQMITFSVEQATTMERSIG--RF--QIPAG-SLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGF 400 (575)
Q Consensus 326 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~-~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~ 400 (575)
.+...++...-|..+..+.+.+.-+..+-..+-. .+ +...+ +....+.+... +...+..++.+|...
T Consensus 263 l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~----i~s~~l~~l~~~~g~---- 334 (477)
T TIGR01301 263 LLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLG----ITSIGMEKLCRGWGA---- 334 (477)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhcc----
Confidence 4455556666666666555555433222111100 00 00001 11122222222 333344444555321
Q ss_pred CchhHH-HHHHHHHHHHHHHHHHHHHHHHH--HHHhhCCCCCCccce-ehhhHHHHHHHHHHHHHhhhhhhheecccCCc
Q 008182 401 TNLQRM-AIGLVLSIVGMAAAALVERKRLS--VARAVGLTTATLPVS-VFLLIPQFFLVGAGEAFIYTGQLDFFITKSPK 476 (575)
Q Consensus 401 ~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~ 476 (575)
.+.+ .++.++.+++++...+......| ..+.++..- .++.. .+..+..+.+.|+..+..+..-++++++..|+
T Consensus 335 --~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~ 411 (477)
T TIGR01301 335 --GKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESL-PPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSN 411 (477)
T ss_pred --chhHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccc-CcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccc
Confidence 1123 67777888888777665321100 000000000 00111 24566778899999999999999999999994
Q ss_pred --chhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhhh
Q 008182 477 --GMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVW 550 (575)
Q Consensus 477 --~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~ 550 (575)
+.+|..+|+.|+.-.+...+.++..|.+.+..+++ ....+.+.++.++++.+..+...++
T Consensus 412 ~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~--------------~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 412 LGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGG--------------NLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCC--------------CeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 55699999999999999999998888765444321 1344566666666666666655554
No 90
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.78 E-value=6.2e-16 Score=162.82 Aligned_cols=387 Identities=14% Similarity=0.135 Sum_probs=220.0
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHH
Q 008182 29 LVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGM 108 (575)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l 108 (575)
.+....+...+.+-...++++.|+++ .|++..|.|.+.++..+...+.++++|+++||...+||.+.+..++.++...+
T Consensus 6 rLs~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~ 84 (400)
T PF03825_consen 6 RLSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLL 84 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHH
Confidence 34445555555555667889999995 58999999999999999999999999999999845677777776666665544
Q ss_pred HHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhh
Q 008182 109 LAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFF 188 (575)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 188 (575)
..... +.+.+++..++..+......|...++.-+...+ ++.-++....
T Consensus 85 ~~~~~------------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--------~~~~YG~iRl 132 (400)
T PF03825_consen 85 LAFSS------------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--------RGKDYGRIRL 132 (400)
T ss_pred HHHhc------------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--------ccCCCCcchh
Confidence 44431 245555556666777777777777776665542 4455666666
Q ss_pred hHHHhHHHHHHH-Hhhhccccc---chhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCC
Q 008182 189 FISLGTLMAVTV-LVYIQDEIS---RSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLP 264 (575)
Q Consensus 189 ~~~ig~~l~~~i-~~~l~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (575)
.+++|.+++... ++.+....+ ....+++.+...++.... .+..|+.+.++..+.+.++
T Consensus 133 wGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~-~l~lp~~~~~~~~~~~~~~----------------- 194 (400)
T PF03825_consen 133 WGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGF-ALFLPKTPPKRSAKESVKK----------------- 194 (400)
T ss_pred hhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHH-HHhCCCCccccccCCCccc-----------------
Confidence 677777776443 233322222 234455554433322222 2222322211110000000
Q ss_pred CCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008182 265 CNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMI 344 (575)
Q Consensus 265 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 344 (575)
....+...+ .++++.+...+..++.....-. +..+.
T Consensus 195 ---------------------~~~~~~~~l----------------------lk~~~~~~Fll~~~l~~~~~~~-~~~f~ 230 (400)
T PF03825_consen 195 ---------------------LLGLDALKL----------------------LKNPRFLVFLLAAFLIGISHAA-YYTFF 230 (400)
T ss_pred ---------------------ccchHHHHH----------------------hcCccHHHHHHHHHHHHHHHHH-HHHHH
Confidence 000000000 0111111111222222222222 12222
Q ss_pred chhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 008182 345 TFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVE 424 (575)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 424 (575)
+.+..+...... ...+...++..+..+.+--+.+ ++.+| .+..+.+.++.+..++-+.+++...
T Consensus 231 ~~yl~~~gg~~~------~~~g~~~~l~~~aEi~~f~~~~----~~~~r------~g~~~ll~~a~~~~~vR~~l~a~~~ 294 (400)
T PF03825_consen 231 SIYLQELGGYSG------STIGILWALGVVAEIPFFFFSG----RFLKR------FGIKWLLLLALVAYAVRWLLYAYFS 294 (400)
T ss_pred HHHHHHcccchh------hHHHHHHHHHHHHHHHHHHHHH----HHHHh------cCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 222221110110 1112223333333333333333 33444 4566678889999999888887651
Q ss_pred HHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHH-HHHHHHHHHHHHHh
Q 008182 425 RKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTT-LSLGFFVSSFLVAV 503 (575)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~-~~lg~~lg~~l~~~ 503 (575)
. +........+....+.|+..++...+...++.+.+|++.|++++++++.. .++|..+|+.++|+
T Consensus 295 ~--------------~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~ 360 (400)
T PF03825_consen 295 D--------------PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGW 360 (400)
T ss_pred C--------------CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 1 00111112233356799999999999999999999999999999998876 57999999999999
Q ss_pred hhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhhh
Q 008182 504 VKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVW 550 (575)
Q Consensus 504 v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~ 550 (575)
+.+..+..+.-. ...+|.+.+++.++..++++++.|+
T Consensus 361 l~~~~g~~~~~~----------~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 361 LYDAFGARGMFD----------WSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHhcchhhhh----------HHHHHHHHHHHHHHHHHHHHhhccC
Confidence 987654322111 2455677777777777777777554
No 91
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.76 E-value=1.9e-16 Score=165.12 Aligned_cols=157 Identities=10% Similarity=-0.001 Sum_probs=136.7
Q ss_pred hhHHHHHHHhhhcCCCCchh-hHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 008182 43 GIAVNLVTYLVGTMHLPSAT-SANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPR 121 (575)
Q Consensus 43 ~~~~~l~~yl~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 121 (575)
...++..+|+.+++|++..| .|.+.+++..++.++.+++|+++||+ |.|+++.++.+...+..++++++++
T Consensus 43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa~S------- 114 (511)
T TIGR00806 43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLGTS------- 114 (511)
T ss_pred chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 34566788999999999999 99999999999999999999999999 9999999999999999999999854
Q ss_pred CCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHH
Q 008182 122 PCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 201 (575)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~ 201 (575)
...+.+.|++.|++.|... +...++..++|+++ |+++.++...+.++|.+++++++
T Consensus 115 -----------------l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ratsi~~sg~~vG~~Ia~~L~ 170 (511)
T TIGR00806 115 -----------------VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRAAAYSRAAVLLGVFLSSVLG 170 (511)
T ss_pred -----------------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 6679999999999999998 99999999999998 99999999999999999999999
Q ss_pred hhhcccccchhHHHH---HHHHHHHHHHHHHhcC
Q 008182 202 VYIQDEISRSVGYGI---CSVAMFMAIIIFLAGT 232 (575)
Q Consensus 202 ~~l~~~~~~~~~f~~---~~~~~~~~~~~~~~~~ 232 (575)
+++ ..+||+.-+.+ ......+++++.++++
T Consensus 171 qll-~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 171 QLL-VTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHH-HhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 995 45788876543 4444455555555543
No 92
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.75 E-value=2.9e-16 Score=170.16 Aligned_cols=368 Identities=12% Similarity=0.071 Sum_probs=207.9
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhh----cccchHH-HHHHHHHHHHH
Q 008182 30 VLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLAD----TFLGRYK-TIAIFAAVQTL 104 (575)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Gr~~-~~~~~~~~~~~ 104 (575)
--+..+..++.+..+.++++.|+++.+|+++.++|.+..+.-+...+..|+.|+++| |+ |||| -++++.+..++
T Consensus 11 yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i 89 (473)
T PRK10429 11 YGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSV 89 (473)
T ss_pred hccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHH
Confidence 334556667777777889999999999999999999999999999999999999999 66 9955 55556666667
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
+.+++... |.. +.......+++..++..++.........++..|+.++.++ |.+..+
T Consensus 90 ~~~llf~~---p~~---------------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~e-----R~~l~~ 146 (473)
T PRK10429 90 VLFLLFSA---HLF---------------EGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKRE-----REQLVP 146 (473)
T ss_pred HHHHHHcC---CCC---------------CccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHH-----HHHHHH
Confidence 66555322 210 0111244455555667788888888888999998854332 889888
Q ss_pred hhhhhHHHhHHHHHHHHhhhcc-------cccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHH
Q 008182 185 RFFFFISLGTLMAVTVLVYIQD-------EISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIK 257 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~-------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (575)
+.....++|+.+++.+...+.. ..+|+....+.+++.++..+..++..|+... ++...+..
T Consensus 147 ~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~----------- 214 (473)
T PRK10429 147 YPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYS-SDNQVSAE----------- 214 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCC-cccccccc-----------
Confidence 8777777776666555443321 1245555555555544444443333332110 00000000
Q ss_pred hccccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHH
Q 008182 258 KRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFW 337 (575)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 337 (575)
.+..++.+.. +.....|.+...+...+......
T Consensus 215 -------------------------~~~~~~~~~~----------------------~~~~~n~~~~~ll~~~~~~~~~~ 247 (473)
T PRK10429 215 -------------------------GSHLTLKDIV----------------------ALIYKNDQLSCLLGMALAYNIAS 247 (473)
T ss_pred -------------------------ccCCCHHHHH----------------------HHHhcCHHHHHHHHHHHHHHHHH
Confidence 0000000000 00001122222222222222222
Q ss_pred HhhhcccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHH
Q 008182 338 TTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGM 417 (575)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~ 417 (575)
.........+... ... + ....+.+..+..+..++..++..++.+|+.+ .+.+..+.++..++.
T Consensus 248 ~~~~~~~~y~~~y--~~~-~----~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk----------k~~~~~~~~~~~~~~ 310 (473)
T PRK10429 248 NIINGFAIYYFTY--VIG-D----ADLFPYYLSYAGAANLVTLILFPRLVKSLSR----------RILWAGASIFPVLSC 310 (473)
T ss_pred HHHhhheeeEEEE--ECC-C----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc----------HHHHHHHHHHHHHHH
Confidence 2222111111111 011 0 0011123334445555666666555333322 233455555555444
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCC-------cchhHHHHHHHHHHH
Q 008182 418 AAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSP-------KGMKTMSTGLFLTTL 490 (575)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~~~ 490 (575)
+.+...... .+.+.+.+++..++.+++.+...+..+++..|..+ ++..|...|.+++.+
T Consensus 311 ~~~~~~~~~--------------~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~ 376 (473)
T PRK10429 311 GVLLLMGLA--------------APHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVV 376 (473)
T ss_pred HHHHHHhcc--------------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHH
Confidence 443321000 01223345566777889999999888888988866 455677999999999
Q ss_pred HHHHHHHHHHHHhhhhhcCCC
Q 008182 491 SLGFFVSSFLVAVVKKVTGSK 511 (575)
Q Consensus 491 ~lg~~lg~~l~~~v~~~~~~~ 511 (575)
-+|..+++.+.|.+.+..+..
T Consensus 377 K~~~al~~~i~g~~l~~~Gy~ 397 (473)
T PRK10429 377 KGGSAFAAFFIGVVLGLIGYV 397 (473)
T ss_pred HHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999988776643
No 93
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.75 E-value=7.6e-16 Score=166.29 Aligned_cols=380 Identities=13% Similarity=0.099 Sum_probs=217.4
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccc-----hHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLG-----RYKTIAIFAA 100 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----r~~~~~~~~~ 100 (575)
....+....++..+. +.+...+++++++++|++.++.+...+...+...+-.+ +|.++||+ + ||+.++++.+
T Consensus 27 ~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 27 VLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGL 103 (468)
T ss_pred HHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHH
Confidence 344555578888888 77888899999999999999999998888888777554 99999998 7 7777777765
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhh
Q 008182 101 VQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA 180 (575)
Q Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 180 (575)
+.. ...+..++.. + .......+.+++.+++.+....+..++..|..+ ++++ .++
T Consensus 104 l~~-~~~~~~l~~~-~--------------------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~---~~~ 157 (468)
T TIGR00788 104 LGS-AILYGLLPGK-V--------------------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS---AGP 157 (468)
T ss_pred HHH-HHHHHhcccc-c--------------------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC---cCC
Confidence 552 1222222210 1 112333346778899989888999999999998 3311 134
Q ss_pred hhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhcc
Q 008182 181 YFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRK 260 (575)
Q Consensus 181 ~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (575)
...++.+.+.++|..+++.++|++.+.++|+..|++.++..++..+...+.+++.+...++.......
T Consensus 158 ~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~------------ 225 (468)
T TIGR00788 158 SLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEM------------ 225 (468)
T ss_pred CeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchh------------
Confidence 45556666678999999999999999899999999988776666444444433210011110000000
Q ss_pred ccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHH-HHHh
Q 008182 261 MDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTII-FWTT 339 (575)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~ 339 (575)
+. .....+..... +.... ........+.+...+.+ ..+ +...
T Consensus 226 ----------~~-----~~~~~~~~~~~--~~~~~-----------------~l~~~l~~~~i~~~l~f---ifl~~~~~ 268 (468)
T TIGR00788 226 ----------NM-----ALLTLGVLANV--KVQIL-----------------GLRGAIQLLEIAKPLIF---IFLSYANL 268 (468)
T ss_pred ----------hh-----hhhhhhHHHHH--HHHHH-----------------HHHHHHhcHHHHHHHHH---HHHHHhhc
Confidence 00 00000000000 00000 00000001111111111 111 1111
Q ss_pred hhcccchhhhhhccccccccccccccc---ccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHH
Q 008182 340 YAQMITFSVEQATTMERSIGRFQIPAG---SLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVG 416 (575)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~ 416 (575)
.......+..+.. . .+.++. .+.....+..++...+.+++ .+| .+..+.+.++.++.+++
T Consensus 269 ~~~~~~~f~~~~~----~---lG~s~~~~G~~~~~~~v~~i~g~~~~~~~----~~~------~~~r~~l~~~~~l~~~~ 331 (468)
T TIGR00788 269 PGASGSVFCATTQ----C---LPGGPSFSGMSKVVGNLGSLCGVGGYDRF----LKT------FPYRLLFGVTTLLYTLS 331 (468)
T ss_pred CCCCceeEEEEcc----c---CCCCcchhhhHHHHHHHHHHHHHHHHHHH----Hhh------CCHHHHHHHHHHHHHHH
Confidence 1111111111111 1 122222 22333333444443333332 332 45555567777777776
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHH
Q 008182 417 MAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFV 496 (575)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l 496 (575)
.+........ .+.. .+ ..+.+++....++.+++.++...+...++.+..|++.+|+..++.+...++|..+
T Consensus 332 ~~~~~~l~~~----~~~~----~g-i~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v 402 (468)
T TIGR00788 332 SLFDLILVKR----WNLA----FG-ISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSV 402 (468)
T ss_pred HhCceeeeec----cccc----cC-CCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHH
Confidence 6443211100 0000 00 0122344556778888888889889999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcC
Q 008182 497 SSFLVAVVKKVTG 509 (575)
Q Consensus 497 g~~l~~~v~~~~~ 509 (575)
++.+++.+.+..+
T Consensus 403 ~~~~gg~l~~~~g 415 (468)
T TIGR00788 403 SGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHHcC
Confidence 9999998876554
No 94
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.75 E-value=3e-16 Score=156.42 Aligned_cols=122 Identities=18% Similarity=0.152 Sum_probs=108.8
Q ss_pred hhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCccccc
Q 008182 53 VGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCE 132 (575)
Q Consensus 53 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 132 (575)
.+..+-+..-+|.+-+.|.+.+++.++.+|.++||+ |||.++++|++..++...+.+.+.
T Consensus 60 ~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~------------------- 119 (451)
T KOG2615|consen 60 GEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR------------------- 119 (451)
T ss_pred CCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 334445667889999999999999999999999999 999999999999999888888873
Q ss_pred CccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcc
Q 008182 133 QASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD 206 (575)
Q Consensus 133 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~ 206 (575)
++..+.++|++.|+..|.. ..+.++++|.+++++ |+.+++.+..+..+|.++||+++|++..
T Consensus 120 -----~F~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 120 -----NFAAFVLARFLGGIFKGNL-SVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred -----HHHHHHHHHHhhhhccCch-HHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 3666788899999999874 677899999999998 9999999999999999999999999987
No 95
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.74 E-value=2.6e-15 Score=158.56 Aligned_cols=179 Identities=13% Similarity=0.038 Sum_probs=122.7
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHH--HHHHHHHHHHHHHHH-HHHhhcccchHHHHHHHHHHH-
Q 008182 27 AALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANI--VTDFMGTSFLLCLLG-GFLADTFLGRYKTIAIFAAVQ- 102 (575)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~-G~laDr~~Gr~~~~~~~~~~~- 102 (575)
...+....+.+.+.+....+.+|.|+++ .|+|.++.|.+ .........+.+|+. ++.+||+ ||||..++...+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 4556677788888888888889999875 59999999997 466688888888887 5579998 9999976665332
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 103 TLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
.+....++.. .+. ......+.....+.++..+...+...++..|..++++ ++..
T Consensus 81 ~~~~~~~~~~--~~~------------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~~~ 134 (390)
T TIGR02718 81 SACLASLALV--GPD------------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LAKG 134 (390)
T ss_pred HHHHHHHHcC--Ccc------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hhHH
Confidence 2122222211 011 0112233333444555556666666667677666665 6777
Q ss_pred hhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 183 FSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 183 ~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
.+....+..+|..+++.+.+++.+..||+.+|++.++..++..+..++..+
T Consensus 135 ~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 135 NAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 777777778999999988899999999999999988776665555544433
No 96
>PRK09669 putative symporter YagG; Provisional
Probab=99.73 E-value=1.2e-15 Score=164.13 Aligned_cols=184 Identities=10% Similarity=0.011 Sum_probs=125.2
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcc---cchHHH-HHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF---LGRYKT-IAIFA 99 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Gr~~~-~~~~~ 99 (575)
++.-+.--+..+..+..+..+..+++.|+++.+|++..++|.+..+.-+...+..|+.|+++||. +||||- ++.+.
T Consensus 8 ~~~~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~ 87 (444)
T PRK09669 8 TKDKIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFA 87 (444)
T ss_pred HHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHH
Confidence 33333344455566666667778899999999999999999999999999999999999999993 288655 44566
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhh
Q 008182 100 AVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQM 179 (575)
Q Consensus 100 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 179 (575)
+..++..+++... |... .......+++..++.+.+.........++.+|+.++.++ |
T Consensus 88 ~~~~i~~~l~f~~---p~~~---------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~e-----R 144 (444)
T PRK09669 88 IPFGVVCLLTFYT---PDFG---------------ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRE-----R 144 (444)
T ss_pred HHHHHHHHHHHhC---CCCC---------------cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHH-----H
Confidence 6666665544433 2210 112345556666666766667777778899998755332 8
Q ss_pred hhhhhhhhhhHHHhHHHHHHHHhhhcc-------cccchhHHHHHHHHHHHHHHHHHh
Q 008182 180 AYFFSRFFFFISLGTLMAVTVLVYIQD-------EISRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 180 ~~~~~~~~~~~~ig~~l~~~i~~~l~~-------~~~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
++..++.....++|+.+++.+...+.. ..+|+..+.+.+++.++..+..++
T Consensus 145 ~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~ 202 (444)
T PRK09669 145 HSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFF 202 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhC
Confidence 888888888888888877665443322 235777776666665555444433
No 97
>PRK09848 glucuronide transporter; Provisional
Probab=99.73 E-value=1.9e-15 Score=162.70 Aligned_cols=158 Identities=9% Similarity=0.035 Sum_probs=103.5
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcc---cchHHHH-HHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF---LGRYKTI-AIFAA 100 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Gr~~~~-~~~~~ 100 (575)
+.-+.-....+..++.+....++++.|+++.+|++..++|.+.++..+...+..|+.|+++||. +||||.. +++.+
T Consensus 8 ~~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~ 87 (448)
T PRK09848 8 RTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTA 87 (448)
T ss_pred HHHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHH
Confidence 3344444556667777777778899999999999999999999999999999999999999995 3777755 45544
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhh
Q 008182 101 VQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA 180 (575)
Q Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 180 (575)
...+..+++... |. +..........++..++.+++.+...+...++..+...+.++ |.
T Consensus 88 ~~~~~~~~~~~~---~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~-----r~ 145 (448)
T PRK09848 88 PLMIFSVLVFWV---PT--------------DWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQS-----RA 145 (448)
T ss_pred HHHHHHHHHHhC---cC--------------CCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHH-----HH
Confidence 444443333211 10 000001233344555667888888888778877777665432 66
Q ss_pred hhhhhhhhh-----HHHhHHHHHHHHhhh
Q 008182 181 YFFSRFFFF-----ISLGTLMAVTVLVYI 204 (575)
Q Consensus 181 ~~~~~~~~~-----~~ig~~l~~~i~~~l 204 (575)
+..++..++ .+++..++|.+.+..
T Consensus 146 ~~~~~r~~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 146 RLGAARGIAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 665554433 345566666665543
No 98
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.73 E-value=2.3e-15 Score=165.28 Aligned_cols=142 Identities=17% Similarity=0.113 Sum_probs=126.5
Q ss_pred hcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccC
Q 008182 54 GTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQ 133 (575)
Q Consensus 54 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (575)
+..+.+........+++.++..+++++.|.++||+ |||+++++++++.+++.++.+++.+
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a~~------------------- 170 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFAPN------------------- 170 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHhCc-------------------
Confidence 45667888899999999999999999999999997 9999999999999999999999843
Q ss_pred ccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhH
Q 008182 134 ASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVG 213 (575)
Q Consensus 134 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~ 213 (575)
+..+++.|++.|++.+....+...+++|.++++. |+.+..+ ......++.+++.+++++.. +||+.
T Consensus 171 -----~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~ 236 (521)
T KOG0255|consen 171 -----YWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWL 236 (521)
T ss_pred -----HHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHH
Confidence 7889999999999999999999999999999999 9999999 77778888888888888877 89999
Q ss_pred HHHHHHHHHHHHHHHH
Q 008182 214 YGICSVAMFMAIIIFL 229 (575)
Q Consensus 214 f~~~~~~~~~~~~~~~ 229 (575)
+++..+...+.++.++
T Consensus 237 ~~~~~~~~~~~~~~~~ 252 (521)
T KOG0255|consen 237 FWIISIPSGLFLLLWF 252 (521)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9998877776655533
No 99
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.73 E-value=9.9e-16 Score=158.92 Aligned_cols=391 Identities=11% Similarity=0.071 Sum_probs=227.3
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
.+.+|......++-.+++-...++++.+++++.|++.++.|.+.++..+...+.+|+.|.++||+ |.||.++..+....
T Consensus 6 ~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~ 84 (412)
T PF01306_consen 6 NKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILL 84 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHH
Confidence 44677777777777777777889999999998999999999999999999999999999999998 97776655443322
Q ss_pred H--HHHHH-HHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhh
Q 008182 104 L--GTGML-AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA 180 (575)
Q Consensus 104 ~--~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 180 (575)
+ +.... .+. |.+. .| ++++.++.++..+.......+. .|.+.++..| +.+
T Consensus 85 ~l~~pff~~v~~---pll~-----------------~n---~~lg~iig~i~l~~~f~~~~~~-~Ea~~er~sr---~~~ 137 (412)
T PF01306_consen 85 LLFGPFFIYVFG---PLLQ-----------------SN---FWLGAIIGGIYLGLVFNAGVPL-SEAYAERVSR---RNG 137 (412)
T ss_dssp HTCHHHHHHTHH---HHHH-----------------TT----HHHHHHTTTTTTTTTTTHHHH-HHHHHHHHHH---HHS
T ss_pred HHHHHHHHHHHH---HHHH-----------------HH---HHHHHHHHHHHHHHHHcccchH-HHHHHHHHHH---Hhc
Confidence 2 22222 222 2210 01 3333344344444433333332 2443332221 134
Q ss_pred hhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhcc
Q 008182 181 YFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRK 260 (575)
Q Consensus 181 ~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (575)
--+|-..+.+++|.+++..++|.+.+ .+.+..||+.....++..++.+..++..+++.+..+..
T Consensus 138 feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~--------------- 201 (412)
T PF01306_consen 138 FEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADAL--------------- 201 (412)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTS---------------
T ss_pred CCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhccc---------------
Confidence 44566777899999999999999976 56678888876655555444444443221111100000
Q ss_pred ccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHH-HHHHHh
Q 008182 261 MDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATT-IIFWTT 339 (575)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~ 339 (575)
..+.+..+.-|.. ++...|.++....+.... ..+...
T Consensus 202 -------------------~~~~~~~~~~~~~-----------------------~l~k~~~fw~~~l~v~g~~~~Y~vf 239 (412)
T PF01306_consen 202 -------------------GAKKDKVSLKDVL-----------------------SLFKMRNFWFFVLFVIGVAAIYDVF 239 (412)
T ss_dssp -------------------SS------HHHHH-----------------------HHTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------ccCCCCCcHHHHH-----------------------HHhcchhHHHHHHHHHHHHHHHHHH
Confidence 0000000000000 011122333333333333 344444
Q ss_pred hhcccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHH
Q 008182 340 YAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAA 419 (575)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~ 419 (575)
.+|++.++..+ .+..-.+ ....+..+++..+...+...+..++ .+| +++.+.+.++..++.+-.+.
T Consensus 240 dqqf~~y~~~~---f~~~~~g-~~~~G~l~s~~v~~E~~~m~~~p~l----i~r------ig~k~~Lllag~i~~iRi~~ 305 (412)
T PF01306_consen 240 DQQFPIYFASF---FQSAGQG-NQMYGYLWSVQVFLEALMMFFSPWL----INR------IGAKNLLLLAGVIMAIRIIG 305 (412)
T ss_dssp HHHHHHHHHHT---SSSHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH----HHH------H-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---hcccccC-hhHHhHHHHHHHHHHHHHHHHHHHH----HHh------cChHhHHHHHHHHHHHHHHH
Confidence 44544333321 1111000 0012233333344443333333333 444 34445578888888888888
Q ss_pred HHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHH-HHHHHHHHHHHH
Q 008182 420 AALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLF-LTTLSLGFFVSS 498 (575)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~-~~~~~lg~~lg~ 498 (575)
.++. .+++++++.-.+.++-..+...+..-|+.+.+|++..++...+. ++..++|..+.+
T Consensus 306 ~~~~-------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s 366 (412)
T PF01306_consen 306 SGFA-------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILS 366 (412)
T ss_dssp HHT---------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHH
T ss_pred Hhhh-------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 7764 45667888899999999999999999999999999999988885 688899999999
Q ss_pred HHHHhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhh
Q 008182 499 FLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAV 549 (575)
Q Consensus 499 ~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~ 549 (575)
.++|.+++..+ .+..|++++++.+...++..+..+
T Consensus 367 ~~~G~lyd~~G----------------~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 367 PLAGYLYDRIG----------------FQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred hhHHhhHhhcC----------------cHHHHHHHHHHHHHHHHHheeeec
Confidence 99999876443 345678888887777776666544
No 100
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.72 E-value=1.2e-15 Score=163.26 Aligned_cols=359 Identities=14% Similarity=0.136 Sum_probs=228.4
Q ss_pred HHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhh----cccchHHHHH-HHHHHHHHHHHH
Q 008182 34 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLAD----TFLGRYKTIA-IFAAVQTLGTGM 108 (575)
Q Consensus 34 ~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Gr~~~~~-~~~~~~~~~~~l 108 (575)
.+...+.+.....++..|.++.+|+++...+.+..+..+...+..|+.|+++| |+ ||||-.+ ++.+..+++.++
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~l 88 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFL 88 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHH
Confidence 34555555566678999999999999999999999999999999999999999 67 9877555 566777777666
Q ss_pred HHHHhhhc-ccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhh
Q 008182 109 LAMVTKLR-QLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFF 187 (575)
Q Consensus 109 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 187 (575)
+... .| ... .......+.+..++..++.........++..|..+++++ |.+..++..
T Consensus 89 lf~~--~p~~~~---------------~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~-----R~~l~~~~~ 146 (428)
T PF13347_consen 89 LFSP--PPAGLS---------------FTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE-----RTRLSSWRM 146 (428)
T ss_pred hhcc--ccchhh---------------hhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhh-----hhhHHHHHH
Confidence 6543 01 100 001234456666777889899889999999999886542 899999888
Q ss_pred hhHHHhHHHHHHHHhhhcccc-------cchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhcc
Q 008182 188 FFISLGTLMAVTVLVYIQDEI-------SRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRK 260 (575)
Q Consensus 188 ~~~~ig~~l~~~i~~~l~~~~-------~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (575)
....+|..+...+.+.+.+.. +|++..++.+++.++..++..+..|+.+.+.+++.+..
T Consensus 147 ~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~-------------- 212 (428)
T PF13347_consen 147 IFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKKI-------------- 212 (428)
T ss_pred HHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccccccccccc--------------
Confidence 888888876666666554322 57777777776666665555555443111111000000
Q ss_pred ccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhh
Q 008182 261 MDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTY 340 (575)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 340 (575)
++. ..++ ...+.|.+...+...+.....+...
T Consensus 213 --------------------------~~~-----------------~~~~-----~~~~nr~~~~l~~~~~~~~~~~~~~ 244 (428)
T PF13347_consen 213 --------------------------SLR-----------------DSLR-----SLFRNRPFRILLLAFFLQWLAFALM 244 (428)
T ss_pred --------------------------ccc-----------------cchh-----hhcccchHHHHHHHHHHHHhhhhhh
Confidence 000 0000 0011111221222222222222211
Q ss_pred hcccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHH
Q 008182 341 AQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAA 420 (575)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~ 420 (575)
+....++..+ ....+ ...+.+..+..+..++..|++.++..|+.+| +.+..+.++.+++.++.
T Consensus 245 ~~~~~y~~~~--vl~~~-----~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~----------~~~~~~~~~~~~~~~~~ 307 (428)
T PF13347_consen 245 NTFLPYYFTY--VLGNE-----GLISIFMLIFFVASIVGSPLWGRLSKRFGKK----------KVYIIGLLLAALGFLLL 307 (428)
T ss_pred hhHHHHHHHH--HhcCc-----hhhHHHHHHHHHHHHHHHHHHHHHHHHccce----------eehhhhHHHHHHHHHHH
Confidence 1111111111 11111 1123334455666677777777775544333 23677888888888777
Q ss_pred HHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCC-------cchhHHHHHHHHHHHHHH
Q 008182 421 ALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSP-------KGMKTMSTGLFLTTLSLG 493 (575)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~~~~lg 493 (575)
.+.. ..+.+++++..++.|++.+..++..+++..|..+ ++..|...|++++...++
T Consensus 308 ~~~~-----------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~ 370 (428)
T PF13347_consen 308 FFLG-----------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIG 370 (428)
T ss_pred HHHH-----------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHH
Confidence 6652 1456678888999999999999999999998886 355799999999999999
Q ss_pred HHHHHHHHHhhhhhcCCC
Q 008182 494 FFVSSFLVAVVKKVTGSK 511 (575)
Q Consensus 494 ~~lg~~l~~~v~~~~~~~ 511 (575)
..+++.+.+.+.+..+..
T Consensus 371 ~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 371 QGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HHHHHHHHHHHHHHhCcC
Confidence 999999999988777654
No 101
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.71 E-value=4.6e-15 Score=165.44 Aligned_cols=205 Identities=16% Similarity=0.192 Sum_probs=153.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 22 GGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
..+|.+...+....+......++.....+.+.++++++.++.|++.+.+.+++.++.++.|+++||+ ||||.+.++.++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll 107 (633)
T TIGR00805 29 SKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAI 107 (633)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHH
Confidence 3345454444444444445556667777788899999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHhhhcc----------------cCCCCCCCcC---------cccccCcc--chhhHHHHHHHHHHHHccc
Q 008182 102 QTLGTGMLAMVTKLRQ----------------LRPRPCKETA---------THTCEQAS--GFQMGVLYIALYLIALGTG 154 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~----------------~~~~~~~~~~---------~~~~~~~~--~~~~~~~~~~~~l~g~g~g 154 (575)
+++|.++.++...... ..+..|.++. ...|.... ...+.+++++|+++|+|.+
T Consensus 108 ~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~ 187 (633)
T TIGR00805 108 MGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGAT 187 (633)
T ss_pred HHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCC
Confidence 9999999887631110 0011222110 00122111 1235678899999999999
Q ss_pred ccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccc----------------------cchh
Q 008182 155 GLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEI----------------------SRSV 212 (575)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~----------------------~~~~ 212 (575)
...+...+++.|++|+++ |+..+++++.+..+|..+|+++++++.+.+ +|+.
T Consensus 188 ~~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl 261 (633)
T TIGR00805 188 PIFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWI 261 (633)
T ss_pred cchhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHH
Confidence 999999999999999999 999999999999999999999999887532 2777
Q ss_pred HHHHHHHHHHHHHHHHHhcCc
Q 008182 213 GYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 213 ~f~~~~~~~~~~~~~~~~~~~ 233 (575)
.|++.+++.++..+.+++..+
T Consensus 262 ~Fli~g~l~~l~~v~l~~~p~ 282 (633)
T TIGR00805 262 GFLICGGVALLTSIPFFFFPK 282 (633)
T ss_pred HHHHHHHHHHHHHHHHHhCcc
Confidence 788877766665554444443
No 102
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.71 E-value=1.2e-14 Score=146.84 Aligned_cols=149 Identities=17% Similarity=0.190 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHH
Q 008182 30 VLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGML 109 (575)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~ 109 (575)
++..-|+..-.....+..+.+.+++.++++..|++.+..+++.++.+++++.|++.+|+ |+|+.++.++.++++|..+.
T Consensus 17 ~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF 95 (422)
T COG0738 17 LLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALF 95 (422)
T ss_pred HHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHH
Confidence 33333333333445567788889999999999999999999999999999999999999 99999999999999999888
Q ss_pred HHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhh
Q 008182 110 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF 189 (575)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 189 (575)
.=+++. ..+..++.+.++.+.|.+......+++++.+.++++ -..-+++.+..
T Consensus 96 ~pAa~~---------------------~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q~f 148 (422)
T COG0738 96 WPAASS---------------------KSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQAF 148 (422)
T ss_pred hhhhhh---------------------hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHHHh
Confidence 755332 348889999999999999999999999999999877 66667888889
Q ss_pred HHHhHHHHHHHHhhhcc
Q 008182 190 ISLGTLMAVTVLVYIQD 206 (575)
Q Consensus 190 ~~ig~~l~~~i~~~l~~ 206 (575)
+.+|..++|.+++++..
T Consensus 149 n~lGa~~gp~~g~~lil 165 (422)
T COG0738 149 NGLGAILGPLLGSSLIL 165 (422)
T ss_pred hhhHHHHHHHHHHHHHH
Confidence 99999999999999876
No 103
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.71 E-value=8.5e-15 Score=158.65 Aligned_cols=386 Identities=14% Similarity=0.041 Sum_probs=214.7
Q ss_pred HHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 008182 46 VNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKE 125 (575)
Q Consensus 46 ~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 125 (575)
.....++..++|-+ ....|+.+...++..+..++.|.++|.+ |||..++++.++..+|.++++-+.+
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~~----------- 130 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQN----------- 130 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCCc-----------
Confidence 44557888999854 6777999999999999999999999998 9999999999999999999998743
Q ss_pred cCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhc
Q 008182 126 TATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ 205 (575)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~ 205 (575)
...++.+..+.|+|.|... .....++|..|.+. |..+..+.....-+....++.++..+.
T Consensus 131 -------------~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~ 190 (599)
T PF06609_consen 131 -------------MNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQLFA 190 (599)
T ss_pred -------------HHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHHhc
Confidence 6669999999999977654 45566899999888 877666655544455556777777776
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhc-Cccc-cccCCCCCchhH------HHHHHHHHHHhccccCCCCccccccCCccc
Q 008182 206 DEISRSVGYGICSVAMFMAIIIFLAG-TKRY-RYKKSSGSPIVH------IFQVIVAAIKKRKMDLPCNVGMLYEDTPEA 277 (575)
Q Consensus 206 ~~~~~~~~f~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (575)
...+|||.|++.++...++++...++ +|.. ++...++.+..+ ....++...---...++-+ +... ..
T Consensus 191 ~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~----wgG~-~~ 265 (599)
T PF06609_consen 191 AHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLS----WGGY-PY 265 (599)
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHh----ccCC-CC
Confidence 66789999999888767665554333 3221 111111111111 1111111100000000000 0000 00
Q ss_pred ccccCCcchhhhhH--HhhhhcCCcCC-C---CCCCCCccccchhhhhHHHHHHHH-HHHHHHHHHHHhhhcccchhhhh
Q 008182 278 SRIHHTEQFHFLDK--AAIVAEGDFEA-G---STPNPWKLCSVTSVEEVKMVARLL-PIWATTIIFWTTYAQMITFSVEQ 350 (575)
Q Consensus 278 ~~i~~~~~~~~~~~--~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~ 350 (575)
..+.+....-.+-. ..+..-..+|. . ..-.|++.+ +++|.+...+ ..++....+ .....+++.+
T Consensus 266 ~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf-----~~~r~~~~~lvi~fi~G~~~----~s~~~l~p~~ 336 (599)
T PF06609_consen 266 YPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLF-----KDRRGFAALLVISFISGMNF----FSVNILWPQQ 336 (599)
T ss_pred CCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHh-----ccchHHHHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 01111111111110 11110011110 0 111333322 2223222221 222222222 2222334333
Q ss_pred hccccccccccc-ccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008182 351 ATTMERSIGRFQ-IPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLS 429 (575)
Q Consensus 351 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 429 (575)
..++..+-. .. ...+.......+...+.+.+...+. ++.+ +.+..+..+.+++.+.+..++...
T Consensus 337 ~~~vf~~d~-~~~~~~~~~s~~~~fg~~~g~~i~g~l~----~~ir-----~~Kw~li~~~~~~ta~~Gama~~~----- 401 (599)
T PF06609_consen 337 VVNVFGSDP-ISITEIGWISSPVGFGSCAGAVILGLLF----SKIR-----HIKWQLIFGSVLMTAFCGAMAAVR----- 401 (599)
T ss_pred HhhhccCCC-cccceeehhhhhHHHHHHHHHHHHHHHH----HHcc-----chhHHHHHHHHHHHHHHHHHHHcc-----
Confidence 322221100 00 0122333344444444444444432 2211 112235566666666555554331
Q ss_pred HHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008182 430 VARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVK 505 (575)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~ 505 (575)
+-+....+...++.+++.+.........+.-..|++.-|+++|+....+.+|+.+|..+...+.
T Consensus 402 ------------~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 402 ------------PDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred ------------CCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 1112223455677788888888788888888899999999999999999999999998886654
No 104
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.71 E-value=2.6e-16 Score=157.72 Aligned_cols=149 Identities=17% Similarity=0.138 Sum_probs=135.4
Q ss_pred hcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccC
Q 008182 54 GTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQ 133 (575)
Q Consensus 54 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (575)
++++-.+++.|++.+.+.+.+.+..|+.|.+.||+ |+|-.+++|++++...++++++..+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg~s------------------- 158 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFGNS------------------- 158 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHcch-------------------
Confidence 35677789999999999999999999999999998 9999999999999999999999844
Q ss_pred ccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhH
Q 008182 134 ASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVG 213 (575)
Q Consensus 134 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~ 213 (575)
+++++++|.++|+|.++...+-.++++|.||++++ |++++|+.-....+|-.+||.++|.+.+..|++.+
T Consensus 159 -----y~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aP 228 (464)
T KOG3764|consen 159 -----YPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAP 228 (464)
T ss_pred -----hHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCCcCc
Confidence 66799999999999999999999999999998774 89999999889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 008182 214 YGICSVAMFMAIIIFLAGT 232 (575)
Q Consensus 214 f~~~~~~~~~~~~~~~~~~ 232 (575)
|.+.+.+.++...+-++..
T Consensus 229 FlVL~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 229 FLVLAIVLLLDGALQLLVI 247 (464)
T ss_pred HHHHHHHHHHHHHHHHhee
Confidence 9999988877666555443
No 105
>PTZ00207 hypothetical protein; Provisional
Probab=99.69 E-value=3.4e-14 Score=154.86 Aligned_cols=173 Identities=14% Similarity=0.090 Sum_probs=127.0
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
|..+...+.+..+.... |+.. .....+++++|++..+.+++.++.. ...++++++|+++||+ |||+++.++.+++.
T Consensus 27 w~~lva~~~~~~~~g~~-y~fs-v~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll~~ 102 (591)
T PTZ00207 27 FALLVLGAFCSICTSFM-YAFN-LISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTVFC 102 (591)
T ss_pred HHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHHHH
Confidence 43444344444444332 3333 4555778899999999999987744 3446777899999999 99999999999999
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
+|.++++++.+. .+ ..+.+.+++.|++.|+|.+...+.....+.++|| ++ |+.+.
T Consensus 103 iG~ll~ala~~~-~i-----------------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~------RG~a~ 157 (591)
T PTZ00207 103 LGTLLFALTFQE-VI-----------------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN------RGAVV 157 (591)
T ss_pred HHHHHHHHHhcc-cc-----------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh------hHHHH
Confidence 999999986221 00 1247788999999999998888888888899996 56 99999
Q ss_pred hhhhhhHHHhHHH-HHHHHhhhcccccchhHHHHHHHHHHHHHHH
Q 008182 184 SRFFFFISLGTLM-AVTVLVYIQDEISRSVGYGICSVAMFMAIII 227 (575)
Q Consensus 184 ~~~~~~~~ig~~l-~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~ 227 (575)
++.....++|+++ +++..+++. .+|+..|++.++..++..++
T Consensus 158 Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll 200 (591)
T PTZ00207 158 AIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGIL 200 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHH
Confidence 9999999999975 555555554 35777777766655554333
No 106
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.68 E-value=3e-15 Score=152.68 Aligned_cols=398 Identities=15% Similarity=0.110 Sum_probs=216.2
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccch
Q 008182 58 LPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGF 137 (575)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (575)
+++.-.+.+..+..++..+++++.||++||+ |||+++-..++++.+++++++++... .+...
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~~~-----------------~~~~~ 142 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSVGT-----------------TSPLG 142 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCCCC-----------------CCCcc
Confidence 6677788899999999999999999999999 99999999999999999977665221 12223
Q ss_pred hhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhh----ccc------
Q 008182 138 QMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYI----QDE------ 207 (575)
Q Consensus 138 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l----~~~------ 207 (575)
-+.++...|+++|+|.|+-+|...+..+|...++. ||...+......+.|...|.++.-.+ ...
T Consensus 143 ~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~ 216 (538)
T KOG0252|consen 143 VMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKT------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPST 216 (538)
T ss_pred hhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcc------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCC
Confidence 46788899999999999999999999999887777 88888876666665555554443332 111
Q ss_pred -----ccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCCCCccccccCCcccccccC
Q 008182 208 -----ISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHH 282 (575)
Q Consensus 208 -----~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 282 (575)
.=||..|.+.++..++.+..-+.++...+++.-...+..+ +.++ .+.+.+. .++.
T Consensus 217 ~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~-------a~~d--~~k~~~~-----------~~~~ 276 (538)
T KOG0252|consen 217 YPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQ-------AAGD--MKKVLSV-----------DIEA 276 (538)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhh-------hhhc--ccccccc-----------ccch
Confidence 1288777766554433333322222211221100001110 0000 0000000 0000
Q ss_pred CcchhhhhHHhhhhcCCcCCCCCCCCC-ccccchhhh-hHHHHHHHHHHHHHHHHHHHhhh-cccchhhhhhcccccccc
Q 008182 283 TEQFHFLDKAAIVAEGDFEAGSTPNPW-KLCSVTSVE-EVKMVARLLPIWATTIIFWTTYA-QMITFSVEQATTMERSIG 359 (575)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 359 (575)
+++. +.. -+.+..+ +++...... ..|.+ +.+..-|..+. -..+.-..|..-++
T Consensus 277 ~~~~----------~~~---~~~~~~~~~~F~~~f~~~hg~~L-------lgt~~~WFllDiafy~~nL~~s~I~~---- 332 (538)
T KOG0252|consen 277 ESTA----------ESD---VPPPSNSFGLFSRLFLRWHGKHL-------LGTAGTWFLLDIAFYGQNLFQSVIFS---- 332 (538)
T ss_pred hhcc----------ccC---CCCcccccchHHHHHHHHHHHHH-------HHHHHHHHhhhhhhhccccHHHHHHH----
Confidence 0000 000 0001111 101100000 11222 22222222221 11110001100000
Q ss_pred cccccccc--c-----ccchhHHHHHHHHH-----HhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008182 360 RFQIPAGS--L-----TVFFVSAILITLAV-----YDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKR 427 (575)
Q Consensus 360 ~~~~~~~~--~-----~~~~~~~~~i~~~l-----~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 427 (575)
..++.++. . .+........++.+ ...+++.+.|| ..-+.|++++++-++.++..-.
T Consensus 333 ~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk----------~iq~~GF~~~~i~~~~~~~~y~-- 400 (538)
T KOG0252|consen 333 AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK----------YIQLMGFFIMTIFFFVIAGPYN-- 400 (538)
T ss_pred hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH----------HHHHhhHHHHHHHHHHHcCCcc--
Confidence 00111111 1 11111112222222 12233333333 3367788888888777764311
Q ss_pred HHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008182 428 LSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKV 507 (575)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~ 507 (575)
+ .......++...+.+.+++..-+.+...+.+|.+|.+.||+.-|++....=.|.+++........+.
T Consensus 401 -------~-----~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~ 468 (538)
T KOG0252|consen 401 -------Q-----LENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDH 468 (538)
T ss_pred -------c-----ccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhc
Confidence 0 0111112333334444555555677888889999999999999999999999999999988876542
Q ss_pred cCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCccc
Q 008182 508 TGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYKPKKPKAG 559 (575)
Q Consensus 508 ~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~~~~~~~~ 559 (575)
- + | ...+....++++++.+.+..++.+++- +.++++.++.
T Consensus 469 ~-------y-p---~~~g~~~v~~i~~~~~~~gi~~T~l~p-Etk~~~leei 508 (538)
T KOG0252|consen 469 N-------Y-P---PNIGVRNVFIILAGCMLLGILFTLLIP-ETKGKSLEEI 508 (538)
T ss_pred c-------C-C---ccccchHHHHHHHHHHHHhHheeEEee-cccccCHHHh
Confidence 2 1 1 122346778999999998888776664 7777766543
No 107
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.67 E-value=3.7e-20 Score=199.21 Aligned_cols=142 Identities=20% Similarity=0.301 Sum_probs=119.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhH
Q 008182 61 ATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMG 140 (575)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (575)
.+.+++.+...++..++++++|+++||+ |||++++++.++..++.++.++++.. .+..
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~---------------------~~~~ 103 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY---------------------NNFW 103 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc---------------------cccc
Confidence 3567899999999999999999999999 99999999999999999999988411 1367
Q ss_pred HHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccc---cchhHHHHH
Q 008182 141 VLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEI---SRSVGYGIC 217 (575)
Q Consensus 141 ~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~---~~~~~f~~~ 217 (575)
.+.++|++.|++.|+..+....++.|..|++. |+...++.+....+|..++..+.-.+.+.. +||..+.+.
T Consensus 104 ~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~ 177 (451)
T PF00083_consen 104 MLLIGRFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFG 177 (451)
T ss_pred cccccccccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccc
Confidence 79999999999999999999999999999999 999999999999999988887765443333 499999887
Q ss_pred HHHHHHHHHHHHh
Q 008182 218 SVAMFMAIIIFLA 230 (575)
Q Consensus 218 ~~~~~~~~~~~~~ 230 (575)
++..++.++...+
T Consensus 178 ~~~~l~~~~~~~~ 190 (451)
T PF00083_consen 178 AIPSLLVLLLRFF 190 (451)
T ss_pred ccccccccccccc
Confidence 7766554444333
No 108
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.65 E-value=9e-14 Score=138.61 Aligned_cols=353 Identities=15% Similarity=0.209 Sum_probs=237.2
Q ss_pred HHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 008182 46 VNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKE 125 (575)
Q Consensus 46 ~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 125 (575)
..+-.-+++++|+|.+++|.+.+...+...+.+++..+++.|+ |.+|.+..++++.++|..+=...
T Consensus 32 gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR~~~------------- 97 (395)
T COG2807 32 GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIRSLG------------- 97 (395)
T ss_pred hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHHhcc-------------
Confidence 4455677889999999999999999999999999999999999 99999999999999998776543
Q ss_pred cCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhc
Q 008182 126 TATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ 205 (575)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~ 205 (575)
+...++.+-.+.|.|.+......++++.+.||++ -+..+++|....++|+++++.+...+.
T Consensus 98 ------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-------~~~mtglYs~sl~~~aaLaa~lavpla 158 (395)
T COG2807 98 ------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-------VGLMTGLYSTSLGAGAALAAALAVPLA 158 (395)
T ss_pred ------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-------hhhHHhHHHHHHHHHHHHHhhhhhHHH
Confidence 2556888889999999999999999999999976 488999999999999999999998888
Q ss_pred ccc-cchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCCCCccccccCCcccccccCCc
Q 008182 206 DEI-SRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTE 284 (575)
Q Consensus 206 ~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 284 (575)
++. +|+.....=+...+++++.++....|.+....+....
T Consensus 159 ~~~~gW~~aL~~WAl~allAl~~WlPq~~r~~~~~~~~~~~--------------------------------------- 199 (395)
T COG2807 159 QHSGGWRGALGFWALLALLALLIWLPQALREQAASIATKLV--------------------------------------- 199 (395)
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHhhhcccccccccccccc---------------------------------------
Confidence 877 7999988878888888888776532211000000000
Q ss_pred chhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhccccccccccccc
Q 008182 285 QFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIP 364 (575)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (575)
+..+.|+ +...+...+.+-+-+..+|..+.+++..+..+. .+.. .
T Consensus 200 -------------------~~~~vw~--------~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G--~sa~------~ 244 (395)
T COG2807 200 -------------------SVRKVWR--------SPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRG--LSAA------E 244 (395)
T ss_pred -------------------ccccccc--------CchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcC--CCHH------H
Confidence 0111121 111222233445666777777777776665542 2222 1
Q ss_pred ccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccce
Q 008182 365 AGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVS 444 (575)
Q Consensus 365 ~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (575)
.+.+..+..+..+...-+...+ .+|.+ +.+........++.++++.+.+.. .+
T Consensus 245 aG~llsl~~l~~~~~~ll~P~l----a~R~~-----n~r~~~~~~~~~~l~G~~G~~~~P------------------~~ 297 (395)
T COG2807 245 AGSLLSLMQLAQLPTALLIPLL----ARRSK-----NQRPLVVLALLLMLVGLVGLLLAP------------------GQ 297 (395)
T ss_pred hhhHHHHHHHHHHHHHHHHHHH----HHHhc-----ccchHHHHHHHHHHHHHHHHHHhh------------------hh
Confidence 2222233333333322222222 23322 233345666677777777666542 22
Q ss_pred ehhhHHHHHHHHHHHHHhhhhhhheecccCC-cchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcc
Q 008182 445 VFLLIPQFFLVGAGEAFIYTGQLDFFITKSP-KGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINR 523 (575)
Q Consensus 445 ~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P-~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~ 523 (575)
..+ ...+++|+|.+..+|....++..... ++..+..+|+.+....+=...||.++|++-+..+ +|
T Consensus 298 ~~~--lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g-----sw------- 363 (395)
T COG2807 298 LPI--LWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG-----SW------- 363 (395)
T ss_pred HHH--HHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC-----Ch-------
Confidence 111 12588999999999998888887665 4556667788888888888889999998876554 44
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhh
Q 008182 524 GRLDLFYGLLAILSIINLVIYLICAV 549 (575)
Q Consensus 524 ~~~~~~f~~~a~l~~v~~~~~~~~~~ 549 (575)
...+..++...++..+.-+...|
T Consensus 364 ---~~~~~~l~~~~i~m~i~Gl~a~r 386 (395)
T COG2807 364 ---SAPLVLLALATLLMLIFGLRAGR 386 (395)
T ss_pred ---HHHHHHHHHHHHHHHHHHhhcch
Confidence 34455555555555554444433
No 109
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.64 E-value=1.8e-13 Score=146.56 Aligned_cols=153 Identities=15% Similarity=0.079 Sum_probs=128.3
Q ss_pred hhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccc
Q 008182 52 LVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTC 131 (575)
Q Consensus 52 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 131 (575)
+.+++++...+.+.+.++|+++++++.+++|.|.||+ .-.+.+....+..++-.++....
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~------------------- 131 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAV------------------- 131 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 3478899999999999999999999999999999999 86776666666655555444444
Q ss_pred cCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhh------c
Q 008182 132 EQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYI------Q 205 (575)
Q Consensus 132 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l------~ 205 (575)
.+.+.+++.|++.|+..++..|+...+++.+|.+++ |+.-+++++.+.++|+++|.++...+ .
T Consensus 132 -----~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~ 200 (495)
T KOG2533|consen 132 -----HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG 200 (495)
T ss_pred -----hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC
Confidence 247779999999999999999999999999999999 99999999999999999999988775 3
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhcCccc
Q 008182 206 DEISRSVGYGICSVAMFMAIIIFLAGTKRY 235 (575)
Q Consensus 206 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 235 (575)
...|||+.|.+.+++.++..++.++..|..
T Consensus 201 ~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~ 230 (495)
T KOG2533|consen 201 GLAGWRWLFIIEGVITLVLGIVVFFFLPDN 230 (495)
T ss_pred CcCCceeehhHHHHHHHHHHheEEEEecCC
Confidence 346899999999988777666665555533
No 110
>PRK11462 putative transporter; Provisional
Probab=99.64 E-value=9e-14 Score=149.98 Aligned_cols=179 Identities=12% Similarity=0.090 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcc---cchHHHHHH-HHHHHHH
Q 008182 29 LVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF---LGRYKTIAI-FAAVQTL 104 (575)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Gr~~~~~~-~~~~~~~ 104 (575)
.--+..+...+.+..+..++..|.++.+|+++..+|.+..+.-+.-.+.-|+.|+++||. +||||-.++ +.+.+++
T Consensus 13 ~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i 92 (460)
T PRK11462 13 GYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGI 92 (460)
T ss_pred hhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHH
Confidence 344556666677777778899999999999999999999999999999999999999973 498876654 5566777
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
+.+++... |... .......+++...+..++.........++.+++.++.++ |++..+
T Consensus 93 ~~~llf~~---p~~s---------------~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~e-----Rt~l~s 149 (460)
T PRK11462 93 VCVLAYST---PDLS---------------MNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQ-----RISLQS 149 (460)
T ss_pred HHHHHHhC---CCCC---------------cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHH-----HHHHHH
Confidence 76665433 2211 112234455566667888888888888899998875442 999999
Q ss_pred hhhhhHHHhHHHHHHHHhhhcccc-------cchhHHHHHHHHHHHHHHHHHh
Q 008182 185 RFFFFISLGTLMAVTVLVYIQDEI-------SRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~~~-------~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
+.....++|..+++.+...+.... +|+....+.+++.++...+.+.
T Consensus 150 ~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~ 202 (460)
T PRK11462 150 WRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFF 202 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 998899998888876655443322 4665555555544444433333
No 111
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.63 E-value=3.8e-14 Score=153.10 Aligned_cols=421 Identities=16% Similarity=0.104 Sum_probs=249.5
Q ss_pred hhHHHHHHHHHHHHHHHhhHH---HHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAV---NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQ 102 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~---~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 102 (575)
--|.+.+..|...+..+++.. .+-..+.++++.+.++.+|+.++......+..|+.+.+.||+ |.|.+.++|.++.
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~ 121 (509)
T KOG2504|consen 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVA 121 (509)
T ss_pred eeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHH
Confidence 356677777777777776643 355677889999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHH-HHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 103 TLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYI-ALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
++|.++.+++++ .+.+++ .-++.|+|.|.........++.+|+ ++ |+.
T Consensus 122 ~~g~~lssF~~~------------------------i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kk------R~l 170 (509)
T KOG2504|consen 122 ALGLLLSSFATS------------------------LWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KK------RAL 170 (509)
T ss_pred HHHHHHHHHHhh------------------------HHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HH------HHH
Confidence 999999999965 433444 4466899999988888888887775 34 899
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccc
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKM 261 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (575)
+.|+...+..+|..+-|.+..++.+.+|||..+++.+.+.+-........+|...+.++. ..++.- . . ..
T Consensus 171 A~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~--~~~~~~-~---~----~~ 240 (509)
T KOG2504|consen 171 ATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN--EEKDLR-N---S----AA 240 (509)
T ss_pred HHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch--hhhhhc-c---c----cc
Confidence 999988889999999999999999999999999987777655555555555533222221 000000 0 0 00
Q ss_pred cCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccc---------cchhhhhHHHHHHHHHHHHH
Q 008182 262 DLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLC---------SVTSVEEVKMVARLLPIWAT 332 (575)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~ 332 (575)
..+...... +...+++...... ......... +..+..++.. ..+..++...+.......+.
T Consensus 241 ~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~ 310 (509)
T KOG2504|consen 241 SVESTPKPV-ELRISERDSGLKK-LSLSNLATL--------KRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFA 310 (509)
T ss_pred ccccccccc-ccccccCCCCCCc-ccccchhhh--------hhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHH
Confidence 000000000 0000000000000 000000000 0001111100 01111121111111111111
Q ss_pred HHHHHHhhhcccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHH
Q 008182 333 TIIFWTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVL 412 (575)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~ 412 (575)
...+...+. .+.........+ ....+....+..+...+.-++.+++. ++. ..+......++.++
T Consensus 311 ~~g~~~p~~----~l~~~~~~~g~~----~~~aa~l~Siigi~~i~gRi~~G~la----D~~----~~~~~~~~~~~ll~ 374 (509)
T KOG2504|consen 311 YLGFNVPFV----YLPSYAKSLGLS----SNDAAFLLSIIGVSDIIGRIILGLLA----DKP----GIRALVLFLLTLLI 374 (509)
T ss_pred HHHHHHHHH----HHHHHHhhcCCC----hhhhHHHHHHHHHhhhhhhhhhhhhc----Ccc----ccchHHHHHHHHHH
Confidence 111111111 111111111000 11122233444444445445545443 221 12233445666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHH
Q 008182 413 SIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSL 492 (575)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~l 492 (575)
.+++.++.... .+...++...+++|++.+...........+..+.+.-..+.|+..+.+++
T Consensus 375 ~gl~~~~~p~~-------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi 435 (509)
T KOG2504|consen 375 AGLARLFLPFA-------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGI 435 (509)
T ss_pred HHHHHHHHHHh-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHH
Confidence 66666555543 23345777788888888888877778888999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhh
Q 008182 493 GFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICA 548 (575)
Q Consensus 493 g~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~ 548 (575)
+..+|+.+.+.+.+..+ .+...|+..++..+++.+..++..
T Consensus 436 ~~l~gpPiag~~~d~tg---------------~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 436 GALVGPPIAGLLYDITG---------------NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHcCcccceeeeeccC---------------CeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999997654332 134556777777777766555544
No 112
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.54 E-value=3.8e-12 Score=133.62 Aligned_cols=371 Identities=15% Similarity=0.121 Sum_probs=227.7
Q ss_pred CcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcc---cchHHHH-HHH
Q 008182 23 GWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF---LGRYKTI-AIF 98 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Gr~~~~-~~~ 98 (575)
..|+-..--..-+..++.+-.+..++..|.++..|+++..+|.+..+.=+.-++.-|+.|.+.||. +||+|-. +.+
T Consensus 10 s~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g 89 (467)
T COG2211 10 SLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWG 89 (467)
T ss_pred cHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHH
Confidence 344444455566667777777889999999999999999999999999999999999999999984 4777754 445
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhh
Q 008182 99 AAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQ 178 (575)
Q Consensus 99 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 178 (575)
.+-.++.++++..+ |... ........++..++.++++........++.+++.++.++
T Consensus 90 ~ip~~i~~~l~F~~---p~~~---------------~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~E----- 146 (467)
T COG2211 90 AIPFAIVAVLLFIT---PDFS---------------MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQE----- 146 (467)
T ss_pred hHHHHHHHHHHHcC---CCcc---------------cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHH-----
Confidence 56777777777665 2111 112355566777888999999988889999998876553
Q ss_pred hhhhhhhhhhhHHHhHHHHHHHHhhhccc-------ccchhHHHHHHHHHHHHHHHHHhcCccccc-cCCCCCchhHHHH
Q 008182 179 MAYFFSRFFFFISLGTLMAVTVLVYIQDE-------ISRSVGYGICSVAMFMAIIIFLAGTKRYRY-KKSSGSPIVHIFQ 250 (575)
Q Consensus 179 r~~~~~~~~~~~~ig~~l~~~i~~~l~~~-------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 250 (575)
|.+..++-....++|..+...+.+.+... .||+..-.+.+++..+.++.+++..++... ..+.++.
T Consensus 147 R~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~------ 220 (467)
T COG2211 147 RASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTG------ 220 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccc------
Confidence 99999999889999988776666555432 345555555555555554444443332211 1111000
Q ss_pred HHHHHHHhccccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHH
Q 008182 251 VIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIW 330 (575)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 330 (575)
..+++-+.-. .....|.+...+...
T Consensus 221 ---------------------------------~~~~~~~~~~----------------------~~~~Nrp~~~~l~~~ 245 (467)
T COG2211 221 ---------------------------------VKLKLKDSFL----------------------LIFKNRPLLLLLLMN 245 (467)
T ss_pred ---------------------------------ccccHHHHHH----------------------HHHccchHHHHHHHH
Confidence 0000000000 011222222222222
Q ss_pred HHHHHHHHhhhcccchhhhhh-cccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHH
Q 008182 331 ATTIIFWTTYAQMITFSVEQA-TTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIG 409 (575)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g 409 (575)
++.. ...+...+...+.. ..++.. ...............+++.++...+ .+| .++.+...++
T Consensus 246 l~~~---~~~~i~~s~~~yy~~y~lg~~----~l~~~~~~~~~~~~~l~~~~~~p~L----~~~------~gkk~~~~~~ 308 (467)
T COG2211 246 LLLF---IAFNIRGSIMVYYVTYVLGDP----ELFAYLLLLASGAGLLIGLILWPRL----VKK------FGKKKLFLIG 308 (467)
T ss_pred HHHH---HHHHHHhhhhheeEEEEcCCh----HHHHHHHHHHHHHHHHHHHHhHHHH----HHH------hchHHHHHHH
Confidence 2222 22222222222211 112211 1111122222222333334444444 333 2333447778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCC-------cchhHHH
Q 008182 410 LVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSP-------KGMKTMS 482 (575)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~ 482 (575)
.++..++.+.+.+.. ..+..++++..++.++|.+...+..++++.+... .+..|..
T Consensus 309 ~~~~~i~~~~~~f~~-----------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~ 371 (467)
T COG2211 309 LLLLAVGYLLLYFTP-----------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIV 371 (467)
T ss_pred HHHHHHHHHHHHhhc-----------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhH
Confidence 888888877776651 2344456666788899999999999999987763 3566788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 008182 483 TGLFLTTLSLGFFVSSFLVAVVKKVTGSK 511 (575)
Q Consensus 483 ~g~~~~~~~lg~~lg~~l~~~v~~~~~~~ 511 (575)
.|.+++.+=+|..++..+.+++....+..
T Consensus 372 ~s~~tF~~K~g~ala~~~~g~~L~~~Gyv 400 (467)
T COG2211 372 YSGMTFFRKLGLALAGFIPGWILGAIGYV 400 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88889998899999999999888776643
No 113
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.54 E-value=2.7e-11 Score=130.31 Aligned_cols=88 Identities=19% Similarity=0.264 Sum_probs=70.6
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcccc
Q 008182 446 FLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGR 525 (575)
Q Consensus 446 ~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~ 525 (575)
+.+.+..++.|+..+..++...++..+..|++..+...|++.+..-.+.++||++.+.+.+..++
T Consensus 381 ~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~--------------- 445 (477)
T PF11700_consen 381 WEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGS--------------- 445 (477)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------------
Confidence 33556677889999999999999999999999999999999999999999999999998875542
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhh
Q 008182 526 LDLFYGLLAILSIINLVIYLICA 548 (575)
Q Consensus 526 ~~~~f~~~a~l~~v~~~~~~~~~ 548 (575)
..+-+..+.++.+++.++.+...
T Consensus 446 ~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 446 QRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred chhHHHHHHHHHHHHHHHHhhcc
Confidence 23445666666666666664443
No 114
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.53 E-value=7.3e-12 Score=124.46 Aligned_cols=160 Identities=13% Similarity=0.078 Sum_probs=124.5
Q ss_pred HHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 008182 39 LSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQL 118 (575)
Q Consensus 39 ~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~ 118 (575)
.........+.+-+....|.+..+..++......+..+++-.+|.++|++ |||+.+.+......+.-++-+.+ |
T Consensus 91 ~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~s---p-- 164 (528)
T KOG0253|consen 91 AMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGAS---P-- 164 (528)
T ss_pred HHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCC---C--
Confidence 33434455566667777899999999999999999999999999999999 99999888877766665665555 3
Q ss_pred CCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHH
Q 008182 119 RPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAV 198 (575)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~ 198 (575)
|+..+++.|.+.++|.|+ .|...++-.+..|... |....-.. ....+|.....
T Consensus 165 -------------------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~waig~v~ea 217 (528)
T KOG0253|consen 165 -------------------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWAIGQVFEA 217 (528)
T ss_pred -------------------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHHHHHHHHH
Confidence 366788999999999999 7888888888888777 77766555 66788999888
Q ss_pred HHHhhhcccccchhHHHHHHHHHHHHHHHHHhc
Q 008182 199 TVLVYIQDEISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 199 ~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
.+.-.+...+||||......+...+....+.+.
T Consensus 218 ~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~ 250 (528)
T KOG0253|consen 218 LLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWV 250 (528)
T ss_pred HHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhc
Confidence 888777888999998777665444444444443
No 115
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.51 E-value=4.6e-14 Score=135.15 Aligned_cols=375 Identities=14% Similarity=0.212 Sum_probs=225.0
Q ss_pred HHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 008182 46 VNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKE 125 (575)
Q Consensus 46 ~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 125 (575)
.-+.++.+.+.++..++..++.+.|..-..+.+.++||+.||.+|-|..-++-.+...+|-++.+...-
T Consensus 64 ~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi----------- 132 (459)
T KOG4686|consen 64 GALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGI----------- 132 (459)
T ss_pred hhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchH-----------
Confidence 457788898999999999999999999999999999999999889887666666666677666654321
Q ss_pred cCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhc
Q 008182 126 TATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ 205 (575)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~ 205 (575)
.+.++.+..+|+++|+|.-....+.+.+...+|..++ ....+|+......+|+.+-..+.+++.
T Consensus 133 ----------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlSvAR~GstvNf~lm~~ly 196 (459)
T KOG4686|consen 133 ----------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLSVARLGSTVNFLLMPFLY 196 (459)
T ss_pred ----------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHHHHHhhceeeeeecHHHH
Confidence 1348889999999999988888889999999999999 999999999899999988888888887
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCCCCccccccCCcccccccCCcc
Q 008182 206 DEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQ 285 (575)
Q Consensus 206 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 285 (575)
+..+--.+ ...-..+++.+++-. +. +..+-.. .......
T Consensus 197 ~~~~~~~~---~~ghT~LG~~l~~~~-~t--------c~~slic-al~lg~~---------------------------- 235 (459)
T KOG4686|consen 197 DTMGRMFP---GVGHTLLGLWLCFEV-KT--------CKQSLIC-ALSLGLS---------------------------- 235 (459)
T ss_pred HHHHHhcc---cchHHHHHHHHHHHH-HH--------HHHHHHH-HHHhhhh----------------------------
Confidence 65431100 000111111111000 00 0000000 0000000
Q ss_pred hhhhhHHhhhh-cCCcC-CCCCCCCCccccchhhhhHHHHH-HHHHHHHHHHHHHHhhhcccchhhhhhccccccccccc
Q 008182 286 FHFLDKAAIVA-EGDFE-AGSTPNPWKLCSVTSVEEVKMVA-RLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQ 362 (575)
Q Consensus 286 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (575)
|+.+..+ +.+.+ .++.+ +. ++++.+- ..-.+.+..+.+++....+.+ .-...+.. .|+
T Consensus 236 ----D~rAerilh~e~g~~Ge~p------kL---tdv~~f~ppfw~~~iicv~yyva~fPFi~---lg~~fF~~---rfG 296 (459)
T KOG4686|consen 236 ----DDRAERILHLEEGFLGEEP------KL---TDVNTFYPPFWVLVIICVLYYVAWFPFIT---LGPMFFQK---RFG 296 (459)
T ss_pred ----hhHHHHHHhhhcCcccCCc------cc---ccccccCccHHHHHHHHHHHHHHHHHHhh---hhHHHHHH---hhC
Confidence 0000000 00000 00000 00 0111100 001122233333333222211 11011111 123
Q ss_pred ccccccccchh---HHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Q 008182 363 IPAGSLTVFFV---SAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTA 439 (575)
Q Consensus 363 ~~~~~~~~~~~---~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (575)
.++....+++. ....+..|+.+.++++..++. ..+..+.+...++-....+.+
T Consensus 297 lS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~---------~wv~~a~~~tl~~H~~l~Ft~--------------- 352 (459)
T KOG4686|consen 297 LSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL---------WWVASACILTLLGHSGLFFTF--------------- 352 (459)
T ss_pred CChhhccchhhhhhhhhhhhhhhHHHhHhhhccee---------hhHHHHHHHHHHHhhhHHhhh---------------
Confidence 34433333333 334455677888877766553 225555555555544444321
Q ss_pred CccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccC
Q 008182 440 TLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLAD 519 (575)
Q Consensus 440 ~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~ 519 (575)
.+ -...+.++|++..+.....|..+...+|++.-|++-|+.+..+++|-.+.+.+++++.+..++ ..
T Consensus 353 ---ls---Py~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~---y~---- 419 (459)
T KOG4686|consen 353 ---LS---PYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGS---YD---- 419 (459)
T ss_pred ---cc---HHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCc---hh----
Confidence 22 235688899999999999999999999999999999999999999999999999988754431 12
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHhhhh
Q 008182 520 NINRGRLDLFYGLLAILSIINLVIYLICAV 549 (575)
Q Consensus 520 ~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~ 549 (575)
..+.+|.....+++....+.+.+-+
T Consensus 420 -----~le~ffl~~~~~aL~svgil~~~N~ 444 (459)
T KOG4686|consen 420 -----NLEAFFLIIGLMALTSVGILFYLNK 444 (459)
T ss_pred -----hHHHHHHHHHHHHHHHHHHHhheec
Confidence 2467777777777666665555433
No 116
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.45 E-value=1.6e-12 Score=141.52 Aligned_cols=180 Identities=12% Similarity=0.163 Sum_probs=131.7
Q ss_pred CcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 008182 23 GWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQ 102 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 102 (575)
+++.....+...++....+|++..++|.|+++.+|++..+.+.......++..++.+++|+++||+ |||+++.++.+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~ 326 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVAL 326 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 344444444445566788899999999999989999998888888888889999999999999999 9999988887654
Q ss_pred HHHHHH-HHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 103 TLGTGM-LAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 103 ~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
.++... .....+ .+...+++++++.+++.+...+....++.+.+|++. |++
T Consensus 327 ~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg~ 378 (490)
T PRK10642 327 FVLAIPAFILINS----------------------NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RYS 378 (490)
T ss_pred HHHHHHHHHHHhC----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------chH
Confidence 443332 222111 124556777888777766666667778889999999 999
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhcccc-cchhHHHHHHHHHHHHHHHHHhc
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQDEI-SRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~~~-~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
+++..+....+++.++|.+.+++.+.. +|+.++++..+..+++++..++.
T Consensus 379 ~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 429 (490)
T PRK10642 379 ALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTM 429 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 999855556777888999999987754 47777666555555555554444
No 117
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.45 E-value=1.1e-12 Score=142.03 Aligned_cols=178 Identities=14% Similarity=0.048 Sum_probs=135.0
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
+.+|...+..++....++++..++|.|+++.+|++..++++....+.++..++.+++|+++||+ |||+.+.+...+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 4578888888888888888889999999999999999999999999999999999999999999 999887766544444
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
+..+..+... .+....++.+++.|+..............|.+|++. |+++.+
T Consensus 337 ~~~~~~~~~~----------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a~g 388 (467)
T PRK09556 337 IFTLGVYQHA----------------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVANG 388 (467)
T ss_pred HHHHHHHHhc----------------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHHHH
Confidence 3322222210 123345566666665433322233355669999888 999999
Q ss_pred hhhhhHHH-hHHHHHHHHhhhcc------------cccchhHHHHHHHHHHHHHHHHHhc
Q 008182 185 RFFFFISL-GTLMAVTVLVYIQD------------EISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 185 ~~~~~~~i-g~~l~~~i~~~l~~------------~~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
+.+...++ |+.++|.+.|++.+ ..+|+..|++..+..+++.+..++.
T Consensus 389 i~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 389 IKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred HHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999886 77999999999999 5789999988877777765555443
No 118
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.44 E-value=2e-12 Score=136.05 Aligned_cols=194 Identities=12% Similarity=0.098 Sum_probs=149.5
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccch-H
Q 008182 15 PADPSKTGGWVPAALVLGIELCERLSTMGIAVNLVTYLVG-TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGR-Y 92 (575)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-~ 92 (575)
..++..+.+||.+++..+..+.....++.+.+..-+|+++ |.+-+.+..|++++...++..+..|..|+++.|. |+ |
T Consensus 24 ~~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k 102 (488)
T KOG2325|consen 24 SPLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVK 102 (488)
T ss_pred ccccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcc
Confidence 3455557789999999999999999888888888899886 5788889999999999999999999999999998 75 7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCC
Q 008182 93 KTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKD 172 (575)
Q Consensus 93 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 172 (575)
+-++.+.++.++|.++.......|+ +...+++++|++.|+|.|. ....-++++|....++
T Consensus 103 ~Pli~s~ii~~~g~llY~~l~~~~~-------------------~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~d 162 (488)
T KOG2325|consen 103 KPLIVSFLIAIIGNLLYLALAYVPN-------------------GVKYLMLVARILTGVGVGN-FAVLRAYIADASTVED 162 (488)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhccc-------------------chHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccc
Confidence 7788899999999998844433333 2477889999999999886 4677788999877778
Q ss_pred hHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcc----cc---------cchhHHHHHHHHHHHHHHHHHhcCccc
Q 008182 173 EKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD----EI---------SRSVGYGICSVAMFMAIIIFLAGTKRY 235 (575)
Q Consensus 173 ~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~----~~---------~~~~~f~~~~~~~~~~~~~~~~~~~~~ 235 (575)
|.++++....+..+|..+||.+...+.. .+ -|..+-|+.+++.++..+...+..++.
T Consensus 163 ------R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 163 ------RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred ------hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeec
Confidence 8888888777667777777666544422 11 144566777777676666655554433
No 119
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.44 E-value=3.3e-10 Score=116.05 Aligned_cols=346 Identities=16% Similarity=0.216 Sum_probs=201.7
Q ss_pred hhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccc-----hHH-HHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCc
Q 008182 53 VGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLG-----RYK-TIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKET 126 (575)
Q Consensus 53 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----r~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 126 (575)
..+++++..-.+.+++..++.+. .++..|+.||+. + ||- =+..+..+++.+..+.+++.-. +. +
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~--l~------~ 76 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLL--LA------E 76 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHH--Hc------c
Confidence 45788999988888888877755 689999999997 5 443 3445566777776666665321 11 0
Q ss_pred CcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcc
Q 008182 127 ATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD 206 (575)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~ 206 (575)
.....+.+.........++..+.|+|.+....+..++++|..||++ |++..++.+...-+|..++..+.+.+.+
T Consensus 77 ~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g~lL~ 150 (403)
T PF03209_consen 77 SGQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFGRLLD 150 (403)
T ss_pred cccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 0001122222333445566667888888888899999999999999 9999999999999999999999998888
Q ss_pred cccchhHHHH----HHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccCCCCccccccCCcccccccC
Q 008182 207 EISRSVGYGI----CSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHH 282 (575)
Q Consensus 207 ~~~~~~~f~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 282 (575)
.++..-..-+ +.+...+.++..+-..++.++..+.++
T Consensus 151 ~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~--------------------------------------- 191 (403)
T PF03209_consen 151 PFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAE--------------------------------------- 191 (403)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCC---------------------------------------
Confidence 7764332222 222222222222322232221110000
Q ss_pred CcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhccccccccccc
Q 008182 283 TEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQ 362 (575)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (575)
.++.++.+...... .. .+.++++.. +++....+.+-..-. -.|--+ . ++
T Consensus 192 ~~~~~f~~a~~~~~----------------~~---~~a~~f~~f--l~l~t~a~~~QD~iL-EPygg~-------V--fg 240 (403)
T PF03209_consen 192 RPRPPFREAWRQVW----------------AS---PQARRFFVF--LFLGTLAFFMQDVIL-EPYGGE-------V--FG 240 (403)
T ss_pred CCCccHHHHHHHHH----------------hC---CChhHHHHH--HHHHHHHHHhhHHHc-CCchhH-------H--cC
Confidence 00111111111100 00 011222111 111111111110000 011111 0 13
Q ss_pred cccc---ccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Q 008182 363 IPAG---SLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTA 439 (575)
Q Consensus 363 ~~~~---~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (575)
++.+ .++..-....++...+.+++.. +| .++.+....|.....+++....+...
T Consensus 241 msv~eTT~Lta~~~~G~L~G~~~~g~~l~---~~------~~~~~~a~~G~~~~~~~f~lii~a~~-------------- 297 (403)
T PF03209_consen 241 MSVGETTRLTAFWGGGTLLGMLLAGFLLS---RR------LGKKRTAALGCLLGALAFALIILAGP-------------- 297 (403)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhc---CC------CCchHHHHHHHHHHHHHHHHHHHHHh--------------
Confidence 3332 2344445555555545454432 22 23333455666666666665554321
Q ss_pred CccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 008182 440 TLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTG 509 (575)
Q Consensus 440 ~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~ 509 (575)
..+.+.+....+++|++.++......+...+.++++..|+.+|.|...+.++..++..+.+.+-+...
T Consensus 298 --~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~ 365 (403)
T PF03209_consen 298 --LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVR 365 (403)
T ss_pred --cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23455677889999999999999999999999999999999999999999999888888887766543
No 120
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.43 E-value=5.2e-12 Score=133.60 Aligned_cols=178 Identities=13% Similarity=0.096 Sum_probs=132.4
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 22 GGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
+++|..+..+...++....++....++|.|+++++|++..+.+.+.+...+...++.+++|+++||+ |||+.+..+...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~ 291 (393)
T PRK15011 213 RNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVA 291 (393)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHH
Confidence 3445444444444555455555667899999999999999999988888888888999999999998 999988777655
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 102 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
..+......... +...+++.+++.+++.+...+.......|.+|+ + |++
T Consensus 292 ~~~~~~~~~~~~------------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~------~g~ 340 (393)
T PRK15011 292 GVCFYAGMLMAH------------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q------AGS 340 (393)
T ss_pred HHHHHHHHHHHh------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C------cch
Confidence 544433333221 244455667766666665555556667787764 5 788
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhc
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
+.++++...++|..++|.++|++.+..+|+.+|++.++..+++++..+..
T Consensus 341 ~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 341 ATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 99998888899999999999999998899999998887777766666554
No 121
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.38 E-value=6.9e-12 Score=132.73 Aligned_cols=175 Identities=13% Similarity=0.026 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Q 008182 28 ALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTG 107 (575)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~ 107 (575)
+.......+..++++.+..+++.|+.+ .|+ .+.+...+.+.++..++.++.|++.||+ ||||.+.++..+..++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~ 294 (399)
T PRK05122 219 WPYGMGLALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLL 294 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHH
Confidence 333333444556666777888888764 465 3456667778888889999999999998 999999988888888777
Q ss_pred HHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhh
Q 008182 108 MLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFF 187 (575)
Q Consensus 108 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 187 (575)
+..+.+ +...+++.+++.|++.+...+.......|.+|+++ |++++++++
T Consensus 295 ~~~~~~------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 344 (399)
T PRK05122 295 LLWLAP------------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYS 344 (399)
T ss_pred HHHHhc------------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHH
Confidence 666542 24456677888999988888877777888888877 999999999
Q ss_pred hhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCcccc
Q 008182 188 FFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYR 236 (575)
Q Consensus 188 ~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 236 (575)
...++|..+++.+.|++.+..||+..|++.++..+++++......++.+
T Consensus 345 ~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 345 VFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999899999999888877777766665555433
No 122
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.38 E-value=3.9e-12 Score=129.50 Aligned_cols=180 Identities=19% Similarity=0.158 Sum_probs=143.7
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhccc-chHHHH-HHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFL-GRYKTI-AIFAAVQ 102 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Gr~~~~-~~~~~~~ 102 (575)
|.+|.+++..++.-+.-|++..+.|.|+.|..|+|..++++..+.|-.+...+.+++||+|||++ |||... +++++..
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999987 777644 4444445
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 103 TLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
.++.+...++ |. ++..+..+..+.+|+-.-+..-.+.....|..|++- -|++
T Consensus 332 ~~~~~~~w~~---~~-------------------~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------aGtA 383 (448)
T COG2271 332 TASLVLYWLA---PN-------------------GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------AGTA 383 (448)
T ss_pred HHHHHHHHcC---CC-------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------ccch
Confidence 5555555554 22 245566666666666555555555556678888777 8999
Q ss_pred hhhhhhhHHH-hHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcC
Q 008182 183 FSRFFFFISL-GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGT 232 (575)
Q Consensus 183 ~~~~~~~~~i-g~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 232 (575)
.|....+..+ |..++....+++.|.+||...|.+..+..+++.++++...
T Consensus 384 ~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 384 TGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred hchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 9999999988 9999999999999999999999887777666666554443
No 123
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.38 E-value=4e-12 Score=132.39 Aligned_cols=171 Identities=13% Similarity=0.076 Sum_probs=136.3
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
+.++.+....++..+.........++|. +++|.+..+.+.+.+.+.++..+++++.|+++||+ |||+.+.++.++..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~ 282 (377)
T TIGR00890 205 PQFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAV 282 (377)
T ss_pred ccHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHH
Confidence 3455555555555555555666677775 46899999999999999999999999999999998 999999999888888
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
+.++..+..+ .+...++...++.+++.+...+..+.++.|.+|+++ |++.++
T Consensus 283 ~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g 334 (377)
T TIGR00890 283 GMAAMLFIPM----------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYG 334 (377)
T ss_pred HHHHHHHccc----------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhH
Confidence 8776665421 112234455667778878777777888999999888 999999
Q ss_pred hhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHH
Q 008182 185 RFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAI 225 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~ 225 (575)
+.+...++|..++|.+.|++.+..||+..|.+.++..++++
T Consensus 335 ~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 335 FLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 99999999999999999999999999999988877666543
No 124
>PRK09952 shikimate transporter; Provisional
Probab=99.37 E-value=9.9e-12 Score=133.44 Aligned_cols=182 Identities=15% Similarity=0.063 Sum_probs=133.0
Q ss_pred CcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 008182 23 GWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQ 102 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 102 (575)
+++.....+...++..+.+|...++++.|+++.+|++......+.........++.++.|+++||+ ||||+++.+.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~ 326 (438)
T PRK09952 248 HPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIG 326 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHH
Confidence 444444445567777888999999999999999999988766666666777788899999999999 9999998887665
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 103 TLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
.++...+....... .....+++..++.+++.+...+...++++|.+|.+. |+++
T Consensus 327 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~tg 380 (438)
T PRK09952 327 TLSAFPFFMALEAQ--------------------SIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RYSG 380 (438)
T ss_pred HHHHHHHHHHHHcC--------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hHHH
Confidence 55443333221100 113333445556677777777888899999999988 9888
Q ss_pred hhhhhh-hHHHhHHHHHHHHhhhcccc--cchhHHHHHHHHHHHHHHHHHhc
Q 008182 183 FSRFFF-FISLGTLMAVTVLVYIQDEI--SRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 183 ~~~~~~-~~~ig~~l~~~i~~~l~~~~--~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
.++.+. +..+|+.++|.+.+++.+.. +|+.++.+.++..+++.+..+..
T Consensus 381 ~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 381 AGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 888544 45589999999999997743 48888887777777666665554
No 125
>PRK03699 putative transporter; Provisional
Probab=99.36 E-value=1.1e-11 Score=131.28 Aligned_cols=174 Identities=10% Similarity=0.122 Sum_probs=135.3
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
+.++...+..++....++++..++|.|+++.+|++..+.+.+.+.+.++..++.+++|+++||+ |||+.+.....+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALV 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHH
Confidence 4566666666777777888889999999999999999999999999999999999999999999 999998887766666
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
...+....+ +...+.+..++.|++.+...+...+...+..++ + +++..+
T Consensus 284 ~~~~~~~~~------------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~------~~~~~g 332 (394)
T PRK03699 284 LMYLFVNTD------------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKV-A------SPKLVN 332 (394)
T ss_pred HHHHHHHcC------------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-C------CHHHHH
Confidence 554444331 233344556677777776777777777776653 3 455677
Q ss_pred hhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHh
Q 008182 185 RFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
....+.++|..++|.+.|++.+..|++..|++.++..+++.+.++.
T Consensus 333 ~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (394)
T PRK03699 333 FILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCIL 378 (394)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHH
Confidence 7777889999999999999999999999998877776666554443
No 126
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.36 E-value=1.5e-11 Score=126.62 Aligned_cols=174 Identities=21% Similarity=0.242 Sum_probs=152.9
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHH-HHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYK-TIAIFAAVQT 103 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~-~~~~~~~~~~ 103 (575)
|.++...+..++..........+++.|+.+.+|.+..+.+.......++..++.++.|+++||+ |||+ .+.++..+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 253 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAA 253 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHH
Confidence 4456666677777788888888999999988899999999999999999999999999999999 9999 9999999888
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
++.++..... +....++..++.+++.+...+....++.|..|+++ |++.+
T Consensus 254 i~~~~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 303 (352)
T cd06174 254 LGLLLLALAP------------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTAS 303 (352)
T ss_pred HHHHHHHHhc------------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHHH
Confidence 8888777652 25567788899999999999999999999999887 99999
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHH
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFL 229 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 229 (575)
+..+...++|..++|.+.+++.+..+|+..|++.++..+++.+...
T Consensus 304 ~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 304 GLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 9999999999999999999999889999999998888777666543
No 127
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.36 E-value=7.8e-12 Score=133.32 Aligned_cols=180 Identities=12% Similarity=0.060 Sum_probs=139.1
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCC--------chhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLP--------SATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAI 97 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~--------~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~ 97 (575)
.++..++..++..........+++.|+.+ .|.+ .+..+.+.++..+...++.++.|+++||+ |||+++.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~ 286 (418)
T TIGR00889 209 RMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLL 286 (418)
T ss_pred CeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHH
Confidence 34455555666555555566777888764 4544 36678999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhh
Q 008182 98 FAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKT 177 (575)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 177 (575)
+.++..++..++..... . ..+...+++.+++.+++.+...+....+++|.+|+++
T Consensus 287 ~~~~~~v~~~l~~~~~~--~------------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~----- 341 (418)
T TIGR00889 287 SLVAWALRFGFFAYGDP--E------------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI----- 341 (418)
T ss_pred HHHHHHHHHHHHHHcCc--c------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH-----
Confidence 99988887766655311 0 0124556778889999988888888899999999888
Q ss_pred hhhhhhhhhh-hhHHHhHHHHHHHHhhhccc------ccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 178 QMAYFFSRFF-FFISLGTLMAVTVLVYIQDE------ISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 178 ~r~~~~~~~~-~~~~ig~~l~~~i~~~l~~~------~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
|++++++.+ ...++|..+||.++|++.+. +||+..|.+.++..+++.++..+..+
T Consensus 342 -~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 342 -RASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred -HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999986 56789999999999999887 46999999887776666555555444
No 128
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.35 E-value=2e-11 Score=127.68 Aligned_cols=173 Identities=16% Similarity=0.118 Sum_probs=132.6
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
.++.+....++.....+.....++.|+.+++|.++.+.+.+.........++.+++|+++||+ |||+.+.++.+...+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 278 (375)
T TIGR00899 200 DTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAF 278 (375)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHH
Confidence 344444444444444455567789999999999999999988887777788899999999998 9999988877665555
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
.......+ +.+.+++.+++.+++.+...+....+..|..|+ + +++++++
T Consensus 279 ~~~~~~~~------------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~ 327 (375)
T TIGR00899 279 YTGLAADN------------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTL 327 (375)
T ss_pred HHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHH
Confidence 44443331 244556667778888887777777888888765 4 5689999
Q ss_pred hhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHh
Q 008182 186 FFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 186 ~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
++...++|..++|.+.|++.+..||+..|++.++..+++.+...+
T Consensus 328 ~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 328 YTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 999999999999999999999899999999888877777666544
No 129
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.35 E-value=4e-10 Score=115.19 Aligned_cols=346 Identities=15% Similarity=0.137 Sum_probs=186.8
Q ss_pred hHHHHHHHhhhcCCC---C----chhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH-HHHHHHHHHHHHHHHHhhh
Q 008182 44 IAVNLVTYLVGTMHL---P----SATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIA-IFAAVQTLGTGMLAMVTKL 115 (575)
Q Consensus 44 ~~~~l~~yl~~~l~~---~----~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~-~~~~~~~~~~~l~~~~~~~ 115 (575)
+...+|+|+++..+- + ++..+...++..+...+..|+.|.++|.. |+||-.. ....+..+...++.++++
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~~- 111 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIPP- 111 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhCC-
Confidence 456789999887654 2 24556677778888889999999999998 8766544 445555556666766622
Q ss_pred cccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHH
Q 008182 116 RQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTL 195 (575)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 195 (575)
..++....+..++..++........++++.|..++++ .++..+.-+...++|+.
T Consensus 112 --------------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~------~~riS~lg~~~gylgs~ 165 (438)
T COG2270 112 --------------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN------MGRISGLGWALGYLGSV 165 (438)
T ss_pred --------------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc------cCcccccccccccccch
Confidence 1235555666667788888888899999999999888 44444444445556665
Q ss_pred HHHHHH--hhh-c---------------ccccchhHHHHHHHHHHHHHHHHHhcCccccccC-CCCCchhHHHHHHHHHH
Q 008182 196 MAVTVL--VYI-Q---------------DEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKK-SSGSPIVHIFQVIVAAI 256 (575)
Q Consensus 196 l~~~i~--~~l-~---------------~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 256 (575)
+.-++. ..+ . +...-|..+.++++-.++..+-++...++..+.. +.++....-.+.+...+
T Consensus 166 i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~~~~l~~g~k~L~~t~ 245 (438)
T COG2270 166 ILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPPPTALRNGFKELKSTF 245 (438)
T ss_pred HHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccccccccchHHHHHHHHHHHHHH
Confidence 554332 111 1 2223566666666665555554444444322111 11111111111111111
Q ss_pred HhccccCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHH
Q 008182 257 KKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIF 336 (575)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 336 (575)
++ .+.+|.+. .|+..-.+
T Consensus 246 k~----------------------------------------------------------i~~~~~i~----~FLiA~~~ 263 (438)
T COG2270 246 KE----------------------------------------------------------IRGRKNLV----LFLIARFF 263 (438)
T ss_pred HH----------------------------------------------------------HhcccchH----HHHHHHHH
Confidence 11 11111111 11111111
Q ss_pred HHhhhcccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHH
Q 008182 337 WTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVG 416 (575)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~ 416 (575)
+ .....+....-..+-..+ ++++...+..+..... +.+.+...+..++.+|+.. .+.+..+.++..+.
T Consensus 264 ~--~DGv~til~~~~~fg~~~---~gls~~~lll~g~~~~-vvA~lg~ii~g~Ld~rfg~------k~vl~~~lvi~~~~ 331 (438)
T COG2270 264 Y--IDGVNTILAMGGVFGAAD---LGLSSTELLLIGIALS-VVAALGAIIAGFLDERFGS------KPVLMIGLVILSIA 331 (438)
T ss_pred H--HhhHHHHHHHHHHHHHHH---cCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCC------ceeehHHHHHHHHH
Confidence 1 011111111000000000 1122211111111111 2222233333334455432 23345555555544
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHH
Q 008182 417 MAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFV 496 (575)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l 496 (575)
.+...+.. ......+...+.+...+-.+....++..+.+|++..+...|+++++...+.++
T Consensus 332 ~~~~~~~~-------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~ 392 (438)
T COG2270 332 ALYLIFLE-------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFL 392 (438)
T ss_pred HHHHHHcc-------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHH
Confidence 44333321 11223344567788888889999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcCC
Q 008182 497 SSFLVAVVKKVTGS 510 (575)
Q Consensus 497 g~~l~~~v~~~~~~ 510 (575)
||.+++.+.+.+++
T Consensus 393 gp~lv~v~t~iTg~ 406 (438)
T COG2270 393 GPFLVAVITQITGS 406 (438)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999998876653
No 130
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.34 E-value=3.9e-11 Score=126.97 Aligned_cols=178 Identities=12% Similarity=-0.035 Sum_probs=138.0
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
+..+.+.+..++...+++++..++|.|+.+ +|++..+.+...+.+.++..++.++.|+++||+ |||+.+.++..+..+
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLV 282 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHH
Confidence 456666666777778888999999999986 799999999999999999999999999999998 999999998877777
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCC-CChHhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDE-KDEKEKTQMAYFF 183 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~ 183 (575)
+..+.... +. +.... ..++.+++.+...+.......+.+++ ++ |++.+
T Consensus 283 ~~~~~~~~---~~--------------------~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~------~g~~~ 331 (393)
T PRK09705 283 GFCGFIWL---PL--------------------QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAI------AGKLV 331 (393)
T ss_pred HHHHHHHc---cc--------------------hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHH------HHHHH
Confidence 76554432 11 11112 12356777777777777667777753 44 89999
Q ss_pred hhhhhhHHHhHHHHHHHHhhhccccc-chhHHHHHHHHHHHHHHHHHhcCccc
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEIS-RSVGYGICSVAMFMAIIIFLAGTKRY 235 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~-~~~~f~~~~~~~~~~~~~~~~~~~~~ 235 (575)
++.+...+++..++|.+.|++.+..| |...|++.++..++.++..+...++.
T Consensus 332 g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 332 AFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999876 88888887776666666655555443
No 131
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.34 E-value=9.1e-12 Score=130.55 Aligned_cols=168 Identities=18% Similarity=0.122 Sum_probs=131.5
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
+.++......++....++....+++.|+++++|.++.+.+.+.....++..++.+++|+++||+ |||+.+.++..+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~ 297 (394)
T TIGR00883 219 KPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAAL 297 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHH
Confidence 3466777777788888888889999999989999999999999999999999999999999999 999988766544443
Q ss_pred HH-HHH-HHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 105 GT-GML-AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 105 ~~-~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
.. .+. .+... .+...+++..++.+++.+...+...+++.|.+|++. |+++
T Consensus 298 ~~~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~ 349 (394)
T TIGR00883 298 LAVPLLMALLDS----------------------GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTG 349 (394)
T ss_pred HHHHHHHHHhcC----------------------CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeE
Confidence 32 222 12100 124455666777888888888889999999999988 9999
Q ss_pred hhhh-hhhHHHhHHHHHHHHhhhccccc-chhHHHHHHHHH
Q 008182 183 FSRF-FFFISLGTLMAVTVLVYIQDEIS-RSVGYGICSVAM 221 (575)
Q Consensus 183 ~~~~-~~~~~ig~~l~~~i~~~l~~~~~-~~~~f~~~~~~~ 221 (575)
++.. .....+|..++|.++|++.+..| |+..++......
T Consensus 350 ~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 350 ASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred eeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 9984 45567899999999999999888 887776655443
No 132
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.33 E-value=1.5e-11 Score=138.30 Aligned_cols=135 Identities=10% Similarity=0.031 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHH
Q 008182 65 NIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYI 144 (575)
Q Consensus 65 ~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (575)
....+..++..++.+++|+++||+ |||++++++.++.+++.++++++.+ ...+++
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~s------------------------~~~ll~ 653 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGNS------------------------ESAMIA 653 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHcc------------------------HHHHHH
Confidence 334556688889999999999998 9999999999999998888877632 334556
Q ss_pred HHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHH
Q 008182 145 ALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMA 224 (575)
Q Consensus 145 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~ 224 (575)
.+++.++..+...+...++++|++|++. |++++++.+...++|.+++|++++++.+. +...+|++.+++.+++
T Consensus 654 ~~~l~g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~ 726 (742)
T TIGR01299 654 LLCLFGGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACG 726 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHH
Confidence 6667777767777888899999999998 99999999999999999999999988763 4667888777776666
Q ss_pred HHHHHhc
Q 008182 225 IIIFLAG 231 (575)
Q Consensus 225 ~~~~~~~ 231 (575)
.++.+++
T Consensus 727 ~ll~~~L 733 (742)
T TIGR01299 727 GLLALKL 733 (742)
T ss_pred HHHHHhC
Confidence 5555544
No 133
>PRK03545 putative arabinose transporter; Provisional
Probab=99.32 E-value=6.2e-11 Score=125.14 Aligned_cols=175 Identities=7% Similarity=-0.063 Sum_probs=135.2
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
.++..+...++.....++...++++|+.+.+|.+..+.+++.+.+.++..+++++.|+++||+ |||+.. .+..+..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~ 283 (390)
T PRK03545 206 ALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVC 283 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHH
Confidence 344555555666666677778889999988999999999999999999999999999999998 987654 444444444
Q ss_pred HHHH-HHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 106 TGML-AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 106 ~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
..+. ... .+...+++..++.|++.+...+.....+.+..| +. |+++++
T Consensus 284 ~~~l~~~~------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~g 332 (390)
T PRK03545 284 LLLLLPAA------------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DA------TDVAMA 332 (390)
T ss_pred HHHHHHHh------------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-Cc------HHHHHH
Confidence 3332 222 124556667778888877776777777777765 46 889999
Q ss_pred hhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 185 RFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
++....++|..+||.++|++.+..|++..|++.+++.+++++......+
T Consensus 333 ~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 333 LFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9988899999999999999999999999999988888887777665544
No 134
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.31 E-value=5.7e-10 Score=114.62 Aligned_cols=138 Identities=12% Similarity=0.069 Sum_probs=107.6
Q ss_pred HHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCc
Q 008182 47 NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKET 126 (575)
Q Consensus 47 ~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 126 (575)
....|....+| +...+.|...+|.+.+.....++-|+.||+ |-|.+.+++..+..+|..+=..+. .|.+.+
T Consensus 66 ~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss-~p~v~~------ 136 (480)
T KOG2563|consen 66 PINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISS-LPFVPP------ 136 (480)
T ss_pred hHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhcc-Cccccc------
Confidence 45567777778 777788999999999999999999999999 999999999999999988776663 232111
Q ss_pred CcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcc
Q 008182 127 ATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD 206 (575)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~ 206 (575)
..-..+.+.+..+.+.+.-.......-+-+-+|++++ |..+..+-.+++.+|.+++.++.+.+..
T Consensus 137 ---------~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 137 ---------LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred ---------cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcchHHHHHHhhccceecC
Confidence 0012366777788777777666665666788899998 9999988888888888888888777765
Q ss_pred cc
Q 008182 207 EI 208 (575)
Q Consensus 207 ~~ 208 (575)
+.
T Consensus 202 ~~ 203 (480)
T KOG2563|consen 202 SS 203 (480)
T ss_pred CC
Confidence 44
No 135
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.30 E-value=5.2e-11 Score=126.17 Aligned_cols=167 Identities=17% Similarity=0.067 Sum_probs=129.7
Q ss_pred HHHHHHHHHhhHHHHHHHhhhcCCCCch---hhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHH
Q 008182 34 ELCERLSTMGIAVNLVTYLVGTMHLPSA---TSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLA 110 (575)
Q Consensus 34 ~~~~~~~~~~~~~~l~~yl~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~ 110 (575)
.++.......+.+.++.|+.+..+.... ..+.+.++..++..++.+..|+++||+ |||+.+..+..+..++.+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~ 306 (408)
T PRK09874 228 TLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMS 306 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHH
Confidence 3344444445567788888765432221 244555666778888899999999999 999999998887777666655
Q ss_pred HHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhH
Q 008182 111 MVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFI 190 (575)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 190 (575)
+.. +...+++.+++.|++.+...+...+.+.+..+++. |++.+++++...
T Consensus 307 ~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~ 356 (408)
T PRK09874 307 FVQ------------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSFR 356 (408)
T ss_pred Hhc------------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHHH
Confidence 441 24556778888999999988888888888888888 999999999999
Q ss_pred HHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhc
Q 008182 191 SLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 191 ~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
++|..+||.++|++.+..||+..|++.+++.+++.+..+..
T Consensus 357 ~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 357 DIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888777776665543
No 136
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.30 E-value=5.3e-11 Score=126.19 Aligned_cols=171 Identities=15% Similarity=0.030 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Q 008182 28 ALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTG 107 (575)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~ 107 (575)
+.+....++.....+....++|.|+.+ .|+++.+.+.+.+.+.++..++.++.|+++||+ |||+.+.++.+...++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~ 300 (406)
T PRK11551 223 LLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLA 300 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHH
Confidence 344444555556677777888999875 799999999999999999999999999999998 999998887666666655
Q ss_pred HHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhh
Q 008182 108 MLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFF 187 (575)
Q Consensus 108 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 187 (575)
+..... +...+.+..++.+++.+...+...++..|.+|+++ |++..++.+
T Consensus 301 ~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~ 350 (406)
T PRK11551 301 ALAAAP------------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAAV 350 (406)
T ss_pred HHHhcC------------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHHH
Confidence 544331 13344555666777777777888889999999988 999999999
Q ss_pred hhHHHhHHHHHHHHhhhccccc-chhHHHHHHHHHHHHHHHHHh
Q 008182 188 FFISLGTLMAVTVLVYIQDEIS-RSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 188 ~~~~ig~~l~~~i~~~l~~~~~-~~~~f~~~~~~~~~~~~~~~~ 230 (575)
...++|..++|.+.|++.+..+ |...+++.....+++.+..+.
T Consensus 351 ~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 351 AVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988654 555666555555555444443
No 137
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.29 E-value=8.7e-11 Score=124.63 Aligned_cols=177 Identities=13% Similarity=0.087 Sum_probs=131.9
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH-HHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIA-IFAAVQT 103 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~-~~~~~~~ 103 (575)
|.++...+..++...++++..+++|.|++ ++|++..+.+.+.+...++..++.++.|+++||+ |||+.+. .+.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Confidence 44666777778888888999999999986 5899999999999999999999999999999998 9988764 3333333
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
++.+.+........ .+....++..++.|++.+...+ ..+...+.. +++ |++++
T Consensus 300 ~~~~~l~~~~~~~~-------------------~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~------~g~~~ 352 (402)
T TIGR00897 300 IFTLALYYIPQHFG-------------------HSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKH------KGAAM 352 (402)
T ss_pred HHHHHHHHHHHccC-------------------CcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cch------hHHHH
Confidence 43333332211000 1244455666777777766544 345556654 446 99999
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHh
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
++.+...++|..++|.+.+++.+..||+.+|++.++..+++.++..+
T Consensus 353 g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 353 SVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888877776665544
No 138
>PRK12382 putative transporter; Provisional
Probab=99.29 E-value=3.6e-11 Score=126.95 Aligned_cols=164 Identities=13% Similarity=0.127 Sum_probs=132.1
Q ss_pred HHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHh
Q 008182 34 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVT 113 (575)
Q Consensus 34 ~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~ 113 (575)
.++..+.+..+..+.+.|+.+ .|++ +.+.....+.++..+++++.|++.||+ ||||.+.++..+..++.++..+..
T Consensus 225 ~~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~ 300 (392)
T PRK12382 225 LALQGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAP 300 (392)
T ss_pred HHHHHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHcc
Confidence 334455566667778888865 4654 355666677778889999999999998 999999999888888877766542
Q ss_pred hhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHh
Q 008182 114 KLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLG 193 (575)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 193 (575)
+....++..++.+++.+...+.......|.+++++ |++.+++++...++|
T Consensus 301 ------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g 350 (392)
T PRK12382 301 ------------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDIA 350 (392)
T ss_pred ------------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHH
Confidence 24556677888899988888888888889898888 999999999999999
Q ss_pred HHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhc
Q 008182 194 TLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 194 ~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
..++|.+.+++.+..||+..|.+.++..+++.+..+..
T Consensus 351 ~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 351 YGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999888777776665544
No 139
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.29 E-value=2e-11 Score=130.22 Aligned_cols=173 Identities=13% Similarity=0.051 Sum_probs=133.1
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHhhhcC---CCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 27 AALVLGIELCERLSTMGIAVNLVTYLVGTM---HLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
++.+++..++....+......++.|+.+.+ +.+..+.+.+.++..+...++.+++|+++||+ |||+.+.++.++..
T Consensus 225 ~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~ 303 (420)
T PRK09528 225 FWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMA 303 (420)
T ss_pred eEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHH
Confidence 333333333343444444556777776543 56777889999999999999999999999999 99999999988888
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
++.+++++++ +.+.+++.+++.+++.+...+....++.+.+|++. |++..
T Consensus 304 ~~~~l~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~ 353 (420)
T PRK09528 304 VRIIGSGFAT------------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIY 353 (420)
T ss_pred HHHHHHHhcc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeee
Confidence 8887777652 25557777888888888777777788899998887 88777
Q ss_pred hh-hhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHh
Q 008182 184 SR-FFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 184 ~~-~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
+. ++...++|..++|.+.|++.+..||+..|.+.+++.++..++.++
T Consensus 354 ~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 354 LVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 66 667788999999999999999999999999877766655544443
No 140
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.29 E-value=6e-11 Score=124.06 Aligned_cols=177 Identities=13% Similarity=0.015 Sum_probs=130.6
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHH-HHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKT-IAIFAAVQT 103 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~-~~~~~~~~~ 103 (575)
|.++..++..++....++....+++.|+.+.+|.++.+.+++.+...+...++.+++|+++||+ |||+. +........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 4577777788888888888899999999999999999999999999999999999999999998 98861 111111111
Q ss_pred HHH---HHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhh
Q 008182 104 LGT---GMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA 180 (575)
Q Consensus 104 ~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 180 (575)
++. .+........ ...........+.+.+.+ ..+...++.+|.+|+++ |+
T Consensus 294 ~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~g 346 (399)
T TIGR00893 294 IAGLVLSLLMFATNYV--------------------NIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI------AG 346 (399)
T ss_pred HHHHHHHHHHHHhccc--------------------hhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH------HH
Confidence 111 1111110000 112222222333344444 67888999999999988 99
Q ss_pred hhhhhhhhhHHHhHHHHHHHHhhhccccc-chhHHHHHHHHHHHHHHHHH
Q 008182 181 YFFSRFFFFISLGTLMAVTVLVYIQDEIS-RSVGYGICSVAMFMAIIIFL 229 (575)
Q Consensus 181 ~~~~~~~~~~~ig~~l~~~i~~~l~~~~~-~~~~f~~~~~~~~~~~~~~~ 229 (575)
+.+++.+...++|..++|.+.|++.+..| |+..|++.++..+++.+..+
T Consensus 347 ~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 347 LTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888 99999888777666655544
No 141
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.28 E-value=6.2e-11 Score=129.18 Aligned_cols=150 Identities=19% Similarity=0.159 Sum_probs=115.4
Q ss_pred hhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 008182 43 GIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRP 122 (575)
Q Consensus 43 ~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 122 (575)
....++|.|+++++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++.++......
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~-------- 363 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIGG-------- 363 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhccc--------
Confidence 4567899999989999999999999999999999999999999998 9999988887666655443332211
Q ss_pred CCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHh
Q 008182 123 CKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 202 (575)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~ 202 (575)
.+...+.+..++.+.......+..++++.|.+|++. |++.+++.+...++|+.++|.+.|
T Consensus 364 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l~g 423 (496)
T PRK03893 364 --------------ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPILGA 423 (496)
T ss_pred --------------cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHHHH
Confidence 122333333333332222334666778899999888 999999999999999999999999
Q ss_pred hhcccccchhHHHHHHHHH
Q 008182 203 YIQDEISRSVGYGICSVAM 221 (575)
Q Consensus 203 ~l~~~~~~~~~f~~~~~~~ 221 (575)
++.+.+||+..+...+...
T Consensus 424 ~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 424 LIAQRLDLGTALASLSFSL 442 (496)
T ss_pred HHhccCChHHHHHHHHHHH
Confidence 9999999998876555433
No 142
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.28 E-value=9.6e-11 Score=123.35 Aligned_cols=163 Identities=13% Similarity=0.194 Sum_probs=126.1
Q ss_pred HHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHh
Q 008182 34 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVT 113 (575)
Q Consensus 34 ~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~ 113 (575)
.+...+.+.....++|.|+++ .|.++.+.+.+.+...++..+++++.|+++||+ |||+.+..+..+..++.+... .
T Consensus 209 ~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~- 284 (381)
T PRK03633 209 CIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S- 284 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h-
Confidence 333344444556778889875 699999999999999999999999999999999 999999888877777654432 1
Q ss_pred hhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHh
Q 008182 114 KLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLG 193 (575)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 193 (575)
......++++.+++.+...|...+.+.|..|+++ ++...+.++...++|
T Consensus 285 -------------------------~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG 333 (381)
T PRK03633 285 -------------------------QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVG 333 (381)
T ss_pred -------------------------hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHH
Confidence 1113345566777666777888888889887766 777777777888999
Q ss_pred HHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhc
Q 008182 194 TLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 194 ~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
..++|.++|++.+.++|++.|.+.+...+++.+..++.
T Consensus 334 ~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 334 SLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998877776655554443
No 143
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.28 E-value=1.1e-11 Score=109.64 Aligned_cols=134 Identities=18% Similarity=0.240 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHH
Q 008182 67 VTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIAL 146 (575)
Q Consensus 67 ~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (575)
.+.+.++..++.++.|+++||+ |||+.+..+..+..++.++..... +...+.+.+
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~ 58 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS------------------------NITVLIIAR 58 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc------------------------cHHHHHHHH
Confidence 3456678889999999999998 999999999888888877776652 256677888
Q ss_pred HHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHH
Q 008182 147 YLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAII 226 (575)
Q Consensus 147 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~ 226 (575)
++.+++.+...+...+++.|.+|+++ |++..++.+...++|..++|.+.+++.+..+|++.|++.++..+++.+
T Consensus 59 ~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (141)
T TIGR00880 59 FLQGFGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFI 132 (141)
T ss_pred HHHHHHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 99999999888999999999999988 999999999999999999999999999988999999888777666655
Q ss_pred HHHhc
Q 008182 227 IFLAG 231 (575)
Q Consensus 227 ~~~~~ 231 (575)
.....
T Consensus 133 ~~~~~ 137 (141)
T TIGR00880 133 LLAFL 137 (141)
T ss_pred HHhhc
Confidence 55443
No 144
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.28 E-value=5.1e-11 Score=126.97 Aligned_cols=175 Identities=9% Similarity=-0.008 Sum_probs=136.4
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH
Q 008182 27 AALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGT 106 (575)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~ 106 (575)
++..++..++... .+++..++|.|+++.+|.++.+.+++.+...++..++.++.|+++||. ++++.+..+.++.+++.
T Consensus 226 ~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~ 303 (417)
T PRK10489 226 VGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAV 303 (417)
T ss_pred HHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHH
Confidence 3333333444322 456677889999988999999999999999999999999999999997 88888888888777777
Q ss_pred HHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhh
Q 008182 107 GMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRF 186 (575)
Q Consensus 107 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 186 (575)
+++.+.+ +.....+..++.|++.+...+...+++.|.+|++. |++.++++
T Consensus 304 ~~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~ 353 (417)
T PRK10489 304 GLFGLMP------------------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLW 353 (417)
T ss_pred HHHHccc------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHH
Confidence 6665542 24455667777888877776777788899999888 99999999
Q ss_pred hhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 187 FFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 187 ~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
+...++|..+||.+.|++.+..|++..+++.++..++..++.....+
T Consensus 354 ~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 354 TAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999888888776655554444433333
No 145
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.28 E-value=4.4e-11 Score=128.93 Aligned_cols=177 Identities=16% Similarity=0.075 Sum_probs=124.2
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccch--HHHH-HHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGR--YKTI-AIFAAV 101 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr--~~~~-~~~~~~ 101 (575)
+.+|...+..++.....|+...++|.|+++..|++..+.+.....+.++..++.+++|+++||+ ++ |+.. .....+
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~-~~~r~~~~~~~~~~l 331 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FRGNRGATGVFFMTL 331 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCCcchHHHHHHHH
Confidence 4577777777787788888899999999999999999999999999999999999999999997 53 3322 222233
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 102 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
..++.++..+. +. .+.....+..++.|.+..........+..|.+|++. |++
T Consensus 332 ~~~~~~~~~~~---~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~ 383 (452)
T PRK11273 332 VTIATIVYWLN---PA-------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AGT 383 (452)
T ss_pred HHHHHHHHHHh---cc-------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hhh
Confidence 33333322221 10 112233334444444322222223345678999888 999
Q ss_pred hhhhhhhhHHHhHHH-HHHHHhhhcccccchhHHHHHHHHHHHHHHHHHh
Q 008182 182 FFSRFFFFISLGTLM-AVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l-~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
++++.+...++|+.+ +|.+.|++.+..||+..|++.++..+++++....
T Consensus 384 ~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 433 (452)
T PRK11273 384 AAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 433 (452)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 999998888888765 7999999999999999999887766666555443
No 146
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.27 E-value=1.1e-10 Score=122.92 Aligned_cols=170 Identities=6% Similarity=-0.029 Sum_probs=144.7
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.++..++..++.....+...++.++|+++ +|.++.+.+.+.+...+...+..+++|++.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 457777777888888888888999999975 899999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
..++.++++ +.+.+++.+.+.|+..+...+....++.+. |+++ |+++.+
T Consensus 283 ~~~~~~~~~------------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~ 331 (382)
T TIGR00902 283 RWAIIGAIE------------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQA 331 (382)
T ss_pred HHHHHHhHh------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHH
Confidence 988887763 366788889999999999999999999987 7777 888888
Q ss_pred hhh-hhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHH
Q 008182 185 RFF-FFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIF 228 (575)
Q Consensus 185 ~~~-~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~ 228 (575)
+++ ....+|..++|.++|++.+..|+ ..|++.+++.++++++.
T Consensus 332 ~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 332 LYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 876 46789999999999999999886 66777766666655443
No 147
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.27 E-value=6.1e-11 Score=121.04 Aligned_cols=186 Identities=17% Similarity=0.079 Sum_probs=149.2
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
-|..|.+++.++...-++-++..+++.|+++++++++.+++.....+.+...+.++.+|+|+||+ |.+|++.+....++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHH
Confidence 46789999988888888889999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
++..+.....+... | ..+...++...+.+++..|.-...+..++...|+++ -+...
T Consensus 296 ~~~~~l~~~~~~~~---------~--------~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~v~ 351 (417)
T COG2223 296 LAAALLSLFLTGFG---------H--------GGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGAVT 351 (417)
T ss_pred HHHHHHHccccccc---------c--------CcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhHHH
Confidence 98888876521110 0 112333333344444555555556688888888764 58889
Q ss_pred hhhhhhHHHhHHHHHHHHhhhccccc-chhHHHHHHHHHHHHHHHHHhcCcc
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEIS-RSVGYGICSVAMFMAIIIFLAGTKR 234 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~-~~~~f~~~~~~~~~~~~~~~~~~~~ 234 (575)
++...+.++|+..-|...+...+.+| +...|++.....+++.+..+..+.|
T Consensus 352 G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 352 GIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988887 9999999888888887776665443
No 148
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.26 E-value=8.1e-11 Score=126.21 Aligned_cols=180 Identities=15% Similarity=0.056 Sum_probs=122.8
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccch--HHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGR--YKTIAIFAAVQT 103 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr--~~~~~~~~~~~~ 103 (575)
.++.+.+..++..+.++++..++|.|+.+++|++..+++...+.+.++..++.+++|+++||+.+| +.......+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHH
Confidence 466666666666777778888999999889999999999999999999999999999999997322 222222211111
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
+....+... +. .+.....+..+.+|++............+|.++++. |++..
T Consensus 324 ~~~~~~~~~---~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~ 375 (434)
T PRK11663 324 LSVGSLWLM---PF-------------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AGAAT 375 (434)
T ss_pred HHHHHHHHc---cc-------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HHhHH
Confidence 111111111 11 012222233333343322222223445678888777 99999
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
++.+...++|..++|.+.|++.+..||+..|++.++..+++.+..+...+
T Consensus 376 g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 425 (434)
T PRK11663 376 GFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLN 425 (434)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999888777666555554433
No 149
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.24 E-value=7.9e-10 Score=112.98 Aligned_cols=86 Identities=19% Similarity=0.053 Sum_probs=71.8
Q ss_pred hhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhccc---------
Q 008182 137 FQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDE--------- 207 (575)
Q Consensus 137 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~--------- 207 (575)
.++..++++.++.|.|.+...+..++++++..++++ +++.+++...+..+|..++|.+++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 357889999999999999999999999999999888 89999999999999999999999987632
Q ss_pred -------ccchhHHHHHHHHHHHHHHHH
Q 008182 208 -------ISRSVGYGICSVAMFMAIIIF 228 (575)
Q Consensus 208 -------~~~~~~f~~~~~~~~~~~~~~ 228 (575)
..|+++|++.+++..+..+.+
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~~~i~~ 109 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAVLAIIF 109 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368899886655544444433
No 150
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.23 E-value=4e-09 Score=112.49 Aligned_cols=350 Identities=13% Similarity=0.058 Sum_probs=209.1
Q ss_pred HHHHHHHHHHhh---HHHHHHHhhhcCCCCchh-hHHHHHHH----HHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 33 IELCERLSTMGI---AVNLVTYLVGTMHLPSAT-SANIVTDF----MGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 33 ~~~~~~~~~~~~---~~~l~~yl~~~l~~~~~~-~~~~~~~~----~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
..+...++++.. ..+...+.....+.+... .+...... .+...+..+..|.++||+ |||..+.+.++...+
T Consensus 26 ~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~l 104 (463)
T KOG2816|consen 26 LLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFGTIL 104 (463)
T ss_pred HHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHHH
Confidence 334444444433 355555655554443332 22333333 567788899999999999 999999999888888
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHH--cccccccchhccccccCCCCChHhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIAL--GTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~--g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
..+...+. .+++++ +.++ +.+.......++++|...+++ |...
T Consensus 105 ~~~~~~~~--------------------------~~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~------R~~~ 149 (463)
T KOG2816|consen 105 PALCLLFQ--------------------------GYWFFL---LLGLSGGFSAIFSVGFAYVADISSEEE------RSSS 149 (463)
T ss_pred hHHHHHHH--------------------------HHHHhh---hcccccchhhhhhhhhhheeeccchhH------HHHH
Confidence 77666654 122222 3333 334556777889999999888 9999
Q ss_pred hhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCC-chhHHHHHHHHHHHhccc
Q 008182 183 FSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGS-PIVHIFQVIVAAIKKRKM 261 (575)
Q Consensus 183 ~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 261 (575)
+++.......+..++|..++++.+..|...+|++..+..+++.+..++..|+...++.++. +..
T Consensus 150 ~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~--------------- 214 (463)
T KOG2816|consen 150 IGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLR--------------- 214 (463)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccccc---------------
Confidence 9999999999999999999999999999999999999888888777766654433222210 000
Q ss_pred cCCCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhh
Q 008182 262 DLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYA 341 (575)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 341 (575)
... ..++.++-.. .+++... ..+.+|..+..+. ......+.-..
T Consensus 215 --~~~---------------~~~~~~~~~~---------------~~~~~~~--~~~~~r~~l~l~l--~~~~~~~~~~~ 258 (463)
T KOG2816|consen 215 --ELT---------------PGSLDSSHVA---------------DAFQSLT--KVGPDRLLLLLLL--VAFLSSLPEAG 258 (463)
T ss_pred --ccC---------------CCcccchhhh---------------hhhhhhc--ccCCCccchHHHH--HHHHHHHHHhc
Confidence 000 0000000000 0000000 0111222221111 11111111111
Q ss_pred ccc-chhhhhhccccccccccccccc---ccccc----hhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHH
Q 008182 342 QMI-TFSVEQATTMERSIGRFQIPAG---SLTVF----FVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLS 413 (575)
Q Consensus 342 ~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~ 413 (575)
+.. ..+. +.... +++... .+... ..+..+++.|+.... +.. .+.+..|+..-
T Consensus 259 ~~~~~~~~----yl~~~---f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~---l~~----------~~~i~lGl~~~ 318 (463)
T KOG2816|consen 259 GASDVLLL----YLKAK---FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI---LGE----------KRLISLGLLSE 318 (463)
T ss_pred CceeEEEE----EEeee---cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhh----------hhHhhHHHHHH
Confidence 111 1111 11212 122221 12222 233333333333222 111 12478899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHH
Q 008182 414 IVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLG 493 (575)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg 493 (575)
.+..+++++.+. .|................|...+++...+.++.+|+..++......++
T Consensus 319 ~~~~~~~af~~~--------------------~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~ 378 (463)
T KOG2816|consen 319 FLQLLLFAFATE--------------------TWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLS 378 (463)
T ss_pred HHHHHHHHHhcc--------------------chhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHh
Confidence 999999987632 244455556666677888999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcC
Q 008182 494 FFVSSFLVAVVKKVTG 509 (575)
Q Consensus 494 ~~lg~~l~~~v~~~~~ 509 (575)
+.+++.+.+.++....
T Consensus 379 ~~~~~~~~~~i~~~t~ 394 (463)
T KOG2816|consen 379 GVVSPALYGNIFALTL 394 (463)
T ss_pred hhhhHHHHHHHHHHHH
Confidence 9999999998877654
No 151
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.23 E-value=2.5e-10 Score=124.28 Aligned_cols=180 Identities=13% Similarity=0.122 Sum_probs=131.3
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHH-HHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 27 AALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVT-DFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
.+.+++..++..+..+....+.++|+.+++|++..+.+.+.. ...++..++.+++|+++||+ ||||.+.++.++.+++
T Consensus 224 ~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~ 302 (491)
T PRK11010 224 AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVS 302 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHH
Confidence 344444455555666666778889988889999999999875 55678899999999999999 9999888776665555
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
.+........+ .+...+.+..++..+..|...+...++..+..+++. +++.+++
T Consensus 303 ~l~~~~l~~~~--------------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl 356 (491)
T PRK11010 303 NAGYWLLSITD--------------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFAL 356 (491)
T ss_pred HHHHHHHHhcc--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHH
Confidence 43332211100 113333444455444445444556777888888887 7888999
Q ss_pred hhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 186 FFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 186 ~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
.+...++|..+++.+.|++.+..||+..|.+.++..+++++.....++
T Consensus 357 ~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 357 LSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999889999999999999999888888887777666544
No 152
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.22 E-value=1.2e-10 Score=122.81 Aligned_cols=157 Identities=19% Similarity=0.139 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHH
Q 008182 30 VLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGML 109 (575)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~ 109 (575)
+.....+..........+++.|+.+++|++..+.+++.+...++..++.++.|+++||+ |||+.+.++.++..+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 321 (405)
T TIGR00891 243 LVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPV 321 (405)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHH
Confidence 33344444555556677899999999999999999999999999999999999999998 99999988876553332222
Q ss_pred HHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhh
Q 008182 110 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF 189 (575)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 189 (575)
... . .+...+.+..++.++..+...+..++++.|.+|+++ |++.+++.+..
T Consensus 322 ~~~-~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~ 372 (405)
T TIGR00891 322 FAI-G----------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGFTYQL 372 (405)
T ss_pred HHh-C----------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhHHHHH
Confidence 111 0 123445555556666556666777889999999988 99999999999
Q ss_pred HHHhHHHHHHHHhhhccccc-chhHHHH
Q 008182 190 ISLGTLMAVTVLVYIQDEIS-RSVGYGI 216 (575)
Q Consensus 190 ~~ig~~l~~~i~~~l~~~~~-~~~~f~~ 216 (575)
.++|..++|.+.|++.+..| |+..|..
T Consensus 373 ~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 373 GNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 99999999999999999888 8776654
No 153
>PRK15075 citrate-proton symporter; Provisional
Probab=99.21 E-value=2.5e-10 Score=122.45 Aligned_cols=153 Identities=14% Similarity=0.122 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH-HH
Q 008182 31 LGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTG-ML 109 (575)
Q Consensus 31 ~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~-l~ 109 (575)
+...++....++.+..++|.|+++.+|++..+.++....+.++..++.+++|+++||+ |||+.++++.++..+... ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 3444456677788889999999988999999999888888899999999999999999 999988876554433221 11
Q ss_pred HHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhh
Q 008182 110 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF 189 (575)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 189 (575)
..... . .+.....+..++.+++.+...+...+++.|.+|++. |++++++.+..
T Consensus 323 ~~~~~--~-------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~~~ 375 (434)
T PRK15075 323 SWLVA--A-------------------PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAYSL 375 (434)
T ss_pred HHHHc--C-------------------CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHHHH
Confidence 11111 0 112223333444555666666666778899999998 99999985554
Q ss_pred HH-HhHHHHHHHHhhhcccccch
Q 008182 190 IS-LGTLMAVTVLVYIQDEISRS 211 (575)
Q Consensus 190 ~~-ig~~l~~~i~~~l~~~~~~~ 211 (575)
.+ +++.++|.+.+++.+..|++
T Consensus 376 ~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 376 ATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHhhhHHHHHHHHHHhcCCc
Confidence 44 46788999999999988853
No 154
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.20 E-value=3.9e-10 Score=120.81 Aligned_cols=169 Identities=15% Similarity=0.070 Sum_probs=112.0
Q ss_pred HHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHH-Hh
Q 008182 35 LCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAM-VT 113 (575)
Q Consensus 35 ~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~-~~ 113 (575)
++....+|++.+++|.|+.+++|++..+.+...++......+++++.|+++||+ |||+.+.++.++.++....... ..
T Consensus 253 ~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~ 331 (432)
T PRK10406 253 AAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSALQ 331 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH
Confidence 344778888999999999999999999999988888888889999999999998 9999887766544333322211 11
Q ss_pred hhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHH-
Q 008182 114 KLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL- 192 (575)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i- 192 (575)
... +....+....+...+.+...+....+.+|.+|++. |++++|+.+...++
T Consensus 332 ~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~~~~~g~~~ 384 (432)
T PRK10406 332 NVS---------------------SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGLSYAVANAL 384 (432)
T ss_pred cCC---------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhHHHHHHHHH
Confidence 100 11111111111222223333456677899999999 99999997766553
Q ss_pred hHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhc
Q 008182 193 GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 193 g~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
++...|.+.+++.....|...+++.++..+++++..++.
T Consensus 385 ~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 385 FGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred HHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 355588888866443336666666666666655555443
No 155
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.20 E-value=2.1e-10 Score=123.75 Aligned_cols=172 Identities=10% Similarity=-0.020 Sum_probs=135.8
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHH--HH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF-LGRYKTIAIFA--AV 101 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~-~Gr~~~~~~~~--~~ 101 (575)
|.++..++..++..++++....+++.|+.+ +|++..+.+.+.++..++..++++++|+++||. .++|+...++. +.
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 446666677777778888888899999875 799999999999999999999999999999984 14444444433 22
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 102 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
..++.+++.+. .+...+++.+++.|++.+...+...+++.|.+|+++ +++
T Consensus 320 ~~l~~ll~~~~------------------------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~g~ 369 (455)
T TIGR00892 320 NGLTHLLCALA------------------------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------FSS 369 (455)
T ss_pred HHHHHHHHHHh------------------------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------Hhh
Confidence 33333343333 135567788889999999988999999999999887 999
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhcccc-cchhHHHHHHHHHHHHHHH
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQDEI-SRSVGYGICSVAMFMAIII 227 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~~~-~~~~~f~~~~~~~~~~~~~ 227 (575)
.+++++...++|..+||.++|++.+.. +|+..|++.++..+++.+.
T Consensus 370 ~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 370 AVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 999999999999999999999998877 5999999888776665554
No 156
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.20 E-value=3.2e-10 Score=121.90 Aligned_cols=166 Identities=11% Similarity=0.028 Sum_probs=119.7
Q ss_pred HHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCc
Q 008182 47 NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKET 126 (575)
Q Consensus 47 ~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 126 (575)
+..++..+++|++..+.++......++..++.+++|+++||+ |||+.+.+++++..++.+++++...... .
T Consensus 305 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------- 375 (481)
T TIGR00879 305 YYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFV-T------- 375 (481)
T ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhccc-C-------
Confidence 334444557899998899999999999999999999999998 9999999998888887776664311010 0
Q ss_pred CcccccCccchhhHHH-HHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhc
Q 008182 127 ATHTCEQASGFQMGVL-YIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ 205 (575)
Q Consensus 127 ~~~~~~~~~~~~~~~~-~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~ 205 (575)
. ... ......+ ....+..+.+.+ ..+....++.|.+|++. |++++++.+.+.++|.+++|.+.+++.
T Consensus 376 ---~-~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~lg~~i~~~~~~~~~ 443 (481)
T TIGR00879 376 ---G-SSK-SSGNVAIVFILLFIAFFAMG-WGPVPWVIVSEIFPLSL------RPKGISIAVAANWLANFIVGFLFPTML 443 (481)
T ss_pred ---C-ccc-chhHHHHHHHHHHHHHHHcc-ccCeehhhhhccCChHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 0012222 222222233333 34666777799999888 999999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 206 DEISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 206 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
+..+|++.|++.++..+++.+..++..+
T Consensus 444 ~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 444 ESIGVGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred HhcCccceehhHHHHHHHHHHHHheecc
Confidence 8889999999888777776666555444
No 157
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.19 E-value=2.4e-10 Score=122.77 Aligned_cols=179 Identities=16% Similarity=0.024 Sum_probs=123.7
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
+.+|...+..++.....+++..++|.|+++..|++..+.++....+.+...++.+++|+++||+ |+++....+..+..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~ 329 (438)
T TIGR00712 251 KLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTL 329 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHH
Confidence 3466666677777777888999999999998999999999999999999999999999999998 765433333322222
Q ss_pred H---HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 105 G---TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 105 ~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
. ..++... +. .+.....+..++.|.+.............|.+|++. |++
T Consensus 330 ~~~~~~~~~~~---~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~ 381 (438)
T TIGR00712 330 VTIAVIVYWMN---PA-------------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGT 381 (438)
T ss_pred HHHHHHHHHhc---CC-------------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eee
Confidence 1 1111111 10 112222333334444322222222345678889888 999
Q ss_pred hhhhhhhhHHHhH-HHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcC
Q 008182 182 FFSRFFFFISLGT-LMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGT 232 (575)
Q Consensus 182 ~~~~~~~~~~ig~-~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 232 (575)
+.++.+...++|+ .++|.+.|.+.+..||...|++.++..+++.+..++..
T Consensus 382 ~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 433 (438)
T TIGR00712 382 AAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 433 (438)
T ss_pred ehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888875 68999999999999999999887776666666555443
No 158
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.17 E-value=1.1e-09 Score=112.86 Aligned_cols=178 Identities=13% Similarity=0.112 Sum_probs=145.4
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
+.++..++..++...+.|...+++.+++.+..|++.+..+++...|.++..++.+++|+++|| +.|+++.....++++
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~ 288 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLAL 288 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHH
Confidence 457788888999999999999999999999999999999999999999999999999999999 788888888888887
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
..+.+.+..+ +.....+..++.|+..+........-+++ ..++. ++.+.+
T Consensus 289 ~~l~l~~~~~-----------------------~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~------~~~a~s 338 (394)
T COG2814 289 ALLALTFTGA-----------------------SPALALALLFLWGFAFSPALQGLQTRLAR-LAPDA------ADLAGS 338 (394)
T ss_pred HHHHHHHhcc-----------------------hHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCc------hHHHHH
Confidence 7776665532 23444455555666665554544555555 33445 789999
Q ss_pred hhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCcc
Q 008182 185 RFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKR 234 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 234 (575)
++..+.|+|..+|..++|.+.+++|+....++.++..+.++++.+...++
T Consensus 339 l~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 339 LNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999888888877665543
No 159
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.15 E-value=5.3e-10 Score=107.57 Aligned_cols=172 Identities=15% Similarity=0.118 Sum_probs=136.4
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHH
Q 008182 15 PADPSKTGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKT 94 (575)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~ 94 (575)
|.....+...+.+|.+.++.++-....+=..+.-+.+.++++|+|+..++.+.+..+..+.+.+|+.|.++||+ ||+-.
T Consensus 254 pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~ 332 (459)
T KOG4686|consen 254 PKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLW 332 (459)
T ss_pred cccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceeh
Confidence 33334455667899998888887777766667788899999999999999999999999999999999999999 99988
Q ss_pred HHHHHHHHHH-HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCCh
Q 008182 95 IAIFAAVQTL-GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDE 173 (575)
Q Consensus 95 ~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 173 (575)
.+.+..+..+ +-.++.++ ...=+++..++|+.......+..+.++...|+++
T Consensus 333 wv~~a~~~tl~~H~~l~Ft--------------------------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~q- 385 (459)
T KOG4686|consen 333 WVASACILTLLGHSGLFFT--------------------------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ- 385 (459)
T ss_pred hHHHHHHHHHHHhhhHHhh--------------------------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH-
Confidence 8777655444 44555443 2223566778888888776668888999999988
Q ss_pred HhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhccccc---chhHHHHHHH
Q 008182 174 KEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEIS---RSVGYGICSV 219 (575)
Q Consensus 174 ~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~---~~~~f~~~~~ 219 (575)
.|++++..+...|+|-++-|++.|.+.+.-| |--.|.+...
T Consensus 386 -----LGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~ 429 (459)
T KOG4686|consen 386 -----LGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIG 429 (459)
T ss_pred -----hcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHH
Confidence 9999999999999999999999999988655 4444544433
No 160
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.15 E-value=4.8e-12 Score=137.91 Aligned_cols=197 Identities=17% Similarity=0.241 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHH
Q 008182 30 VLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGML 109 (575)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~ 109 (575)
+++..+.. ...+++.....+-+.++++++++++|++.+.+-++..+..++..++++|. -|-|-+-++.+++++|.+++
T Consensus 8 ~~~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 8 LCLLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLF 85 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHH
Confidence 33334444 56666777777788999999999999999999999999999999999997 88888889999999999888
Q ss_pred HHHhhhcccCCCCCCCc-----------Ccccc-------------------cCccchhhHHHHHHHHHHHHcccccccc
Q 008182 110 AMVTKLRQLRPRPCKET-----------ATHTC-------------------EQASGFQMGVLYIALYLIALGTGGLKSS 159 (575)
Q Consensus 110 ~~~~~~~~~~~~~~~~~-----------~~~~~-------------------~~~~~~~~~~~~~~~~l~g~g~g~~~~~ 159 (575)
++ |.+..+++... ....| +........+++++.++.|+|.....+.
T Consensus 86 ~l----Phf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tL 161 (539)
T PF03137_consen 86 AL----PHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTL 161 (539)
T ss_dssp ----------------------------------------------------------------------SSS-------
T ss_pred hc----cHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccc
Confidence 65 54433333110 11122 1122223577889999999999999999
Q ss_pred hhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhccc---------------------c-cchhHHHHH
Q 008182 160 VSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDE---------------------I-SRSVGYGIC 217 (575)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~---------------------~-~~~~~f~~~ 217 (575)
-.+++=|..++++ -+...|+.+....+|.++|.++++.+... . .|+..|.+.
T Consensus 162 G~tYiDDnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~ 235 (539)
T PF03137_consen 162 GITYIDDNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLIC 235 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeeecccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHH
Confidence 9999999998888 78889999999999999998888876431 1 388888888
Q ss_pred HHHHHHHHHHHHhcCcccccc
Q 008182 218 SVAMFMAIIIFLAGTKRYRYK 238 (575)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~ 238 (575)
+...++..+.++.+.|+.+..
T Consensus 236 g~~~~l~aipl~~FPk~lp~~ 256 (539)
T PF03137_consen 236 GILLFLSAIPLFFFPKKLPGT 256 (539)
T ss_dssp ---------------------
T ss_pred HHHHHHHHHHHHcCCccCCCc
Confidence 777777666666666655443
No 161
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.15 E-value=1.1e-09 Score=118.01 Aligned_cols=183 Identities=15% Similarity=0.091 Sum_probs=151.4
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchH--HHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRY--KTIAIFAAVQ 102 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~--~~~~~~~~~~ 102 (575)
|.....++..++-+-+..++......|.++.+|++..+...+..+..+...+++++.|++.||+ |.| +++++++++.
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLILW 359 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHH
Confidence 5566677777887788888889999999999999999999999999999999999999999999 999 8988888776
Q ss_pred HHHHHHHHH--HhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhh
Q 008182 103 TLGTGMLAM--VTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA 180 (575)
Q Consensus 103 ~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 180 (575)
.+..+...+ .++. ....+.+.+++.-++.|+..|...+..-++.+++.|+++ .+
T Consensus 360 ~~i~~~g~~G~~~~~------------------~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e~ 415 (477)
T PF11700_consen 360 IIIPLYGLFGFWPSF------------------FGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------EA 415 (477)
T ss_pred HHHHHHHHHHhhhcc------------------cCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------hh
Confidence 443332222 2110 011235567777789999999999999999999999998 89
Q ss_pred hhhhhhhhhHHHhHHHHHHHHhhhccccc-chhHHHHHHHHHHHHHHHHHhcC
Q 008182 181 YFFSRFFFFISLGTLMAVTVLVYIQDEIS-RSVGYGICSVAMFMAIIIFLAGT 232 (575)
Q Consensus 181 ~~~~~~~~~~~ig~~l~~~i~~~l~~~~~-~~~~f~~~~~~~~~~~~~~~~~~ 232 (575)
..||++.......+.+||++.|.+.+.++ .|..+....++.+++++++....
T Consensus 416 efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 416 EFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999886 88888888888777777765543
No 162
>PRK10504 putative transporter; Provisional
Probab=99.14 E-value=7.1e-10 Score=120.10 Aligned_cols=158 Identities=11% Similarity=0.045 Sum_probs=125.0
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.+...+...++..+++.......|.|++..+|.++.+.+++.....++..++.++.|+++||+ |||+++.++..+..+
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 339 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLAL 339 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 3455666667777777665566778888878999999999999988888888889999999999 999999999887777
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
+..++.+... . .+...+.+..++.|++.+...+..+.+..+.+|++. ++..++
T Consensus 340 ~~~~~~~~~~--~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~ 392 (471)
T PRK10504 340 VSLLFMLVAL--L-------------------GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSGNS 392 (471)
T ss_pred HHHHHHhccc--c-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccchHH
Confidence 7666554311 0 123334445667788888888888888889999888 999999
Q ss_pred hhhhhHHHhHHHHHHHHhhhcccccc
Q 008182 185 RFFFFISLGTLMAVTVLVYIQDEISR 210 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~~~~~ 210 (575)
+.+....+|..+|+.++|.+.+..++
T Consensus 393 ~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 393 LLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999988776655
No 163
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.13 E-value=1.3e-08 Score=111.68 Aligned_cols=203 Identities=13% Similarity=0.205 Sum_probs=153.2
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
.+.+..++....+......++.....+-+.+.++++.++.|++.+.+-++..+...+..+.+-|. =|-|.+-++.++++
T Consensus 95 ~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~ 173 (735)
T KOG3626|consen 95 IKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMG 173 (735)
T ss_pred cchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHH
Confidence 34455555555554444457888888889999999999999999999999999999999999998 88889999999999
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCc----------------------cccc-----C----ccch-hhHHHHHHHHHHHH
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETAT----------------------HTCE-----Q----ASGF-QMGVLYIALYLIAL 151 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~----------------------~~~~-----~----~~~~-~~~~~~~~~~l~g~ 151 (575)
+|.++.++ |.+..+|+..... ..|. . .... -+.+++++.++.|+
T Consensus 174 lgsll~al----PHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GI 249 (735)
T KOG3626|consen 174 LGSLLFAL----PHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGI 249 (735)
T ss_pred HHHHHHhC----hHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhc
Confidence 99988875 3222222211110 0111 0 1111 23478899999999
Q ss_pred cccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhccc-------------------ccchh
Q 008182 152 GTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDE-------------------ISRSV 212 (575)
Q Consensus 152 g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~-------------------~~~~~ 212 (575)
|.....+.-.+++=|...+++ -...+|+.+....+|.++|.++++++... ..|+.
T Consensus 250 G~Tpi~tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWl 323 (735)
T KOG3626|consen 250 GATPIFTLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWL 323 (735)
T ss_pred CCCCCccCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHH
Confidence 999999999999988887777 78889999999999999999999887431 13888
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccc
Q 008182 213 GYGICSVAMFMAIIIFLAGTKRYRY 237 (575)
Q Consensus 213 ~f~~~~~~~~~~~~~~~~~~~~~~~ 237 (575)
.|++++.+.++..+.++++.++.++
T Consensus 324 GFLi~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 324 GFLICGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred HHHHHHHHHHHHHHHHHhCcccCcc
Confidence 8988888888888887777665543
No 164
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.13 E-value=2.4e-09 Score=113.65 Aligned_cols=172 Identities=10% Similarity=-0.104 Sum_probs=128.5
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
.++...+..++.....+......|.|+.+++|+++.+.+.......++..++.++.|+++||+ |||+.+.++.++..++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g 294 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAG 294 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 455555555555565666667788898889999999999888878888889999999999999 9999999998888888
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
.++..+....+. .+...++++.++.++|.+...+.......+. ++++ |++..+.
T Consensus 295 ~~~~~~~~~~~~-------------------~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~------~g~~~~~ 348 (406)
T PRK15402 295 LLLAALATVISS-------------------HAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVS------KGTVSAA 348 (406)
T ss_pred HHHHHHHHHccc-------------------ccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cccc------ccHHHHH
Confidence 777766521111 2355566778888888887766665554433 3455 8999999
Q ss_pred hhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHH
Q 008182 186 FFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMA 224 (575)
Q Consensus 186 ~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~ 224 (575)
+++...+|..+|+.+.+++.+..++....+...+..++.
T Consensus 349 ~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 349 MGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 999999999999999999988777665444444333333
No 165
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.12 E-value=7.1e-10 Score=118.08 Aligned_cols=166 Identities=8% Similarity=-0.021 Sum_probs=118.7
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHH-HHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVG-TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKT-IAIFAAVQ 102 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~-~~~~~~~~ 102 (575)
+.+|...+..+|....++++.+++|.|+++ ..|.+..+.+.......++..++.+++|+++||+ |||+. +.+..++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~ 320 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFA 320 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHH
Confidence 456777788888888999999999999987 3577888999999999999999999999999998 87774 34444344
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 103 TLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
.++..+.... + +....+++..+.++|.....+.......+.+|++. |+++
T Consensus 321 ~~~~~~~~~~---~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~a 370 (412)
T TIGR02332 321 AAGWLLASAT---D---------------------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------RAIA 370 (412)
T ss_pred HHHHHHHHhc---C---------------------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------HHHH
Confidence 4433222111 1 01111222223333333333333444566778777 9999
Q ss_pred hhhhhhhHHHhHHHHHHHHhhhccccc-chhHHHHHHHHH
Q 008182 183 FSRFFFFISLGTLMAVTVLVYIQDEIS-RSVGYGICSVAM 221 (575)
Q Consensus 183 ~~~~~~~~~ig~~l~~~i~~~l~~~~~-~~~~f~~~~~~~ 221 (575)
+++.+...++|++++|.+.+.+.+..| |++.|++.++..
T Consensus 371 ~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 371 IAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 999999999999999999999999875 999998776643
No 166
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.12 E-value=2e-08 Score=107.41 Aligned_cols=163 Identities=15% Similarity=0.162 Sum_probs=117.4
Q ss_pred HHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcc--cc--hHHHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 008182 46 VNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF--LG--RYKTIAIFAAVQTLGTGMLAMVTKLRQLRPR 121 (575)
Q Consensus 46 ~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~--~G--r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 121 (575)
.....|+++++|+++++.....+...+- ...-++.|.++|-+ .| ||.-++++.++.+++...++..+...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lP-w~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~----- 83 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLP-WSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASE----- 83 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCc-hHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccccc-----
Confidence 4456788999999999988766655554 45678889999986 34 44455556665555555454432100
Q ss_pred CCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHH
Q 008182 122 PCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 201 (575)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~ 201 (575)
.......+..++..+|....-.+..++..|...++... |+...+..+.+..+|+.++..++
T Consensus 84 ---------------~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~----~g~lqS~~~~~~~~G~lv~~~l~ 144 (433)
T PF03092_consen 84 ---------------SSAAIAVVLLFLASFGYAFADVAADALVVELARREPES----RGDLQSFVWGVRSVGSLVGSLLS 144 (433)
T ss_pred ---------------chhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch----hHHHHHHHHHHHHHHHHHHHHhh
Confidence 12334455667778888888888889999987655533 78888888889999999999999
Q ss_pred hhhcccccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 202 VYIQDEISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 202 ~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
|.+.+..+++..|.+.++...+..+..++..+
T Consensus 145 G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 145 GPLLDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred hhhhhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 99999999999999887776666555555444
No 167
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.10 E-value=2.1e-09 Score=113.51 Aligned_cols=176 Identities=16% Similarity=0.087 Sum_probs=126.8
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHH-HHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMG-TSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
.++..+...++...+.+....+.++|+.+ +|+++++.+++...... ...++.+++|++.||+ |+|+.+.++..+..+
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGS 286 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHH
Confidence 45556666677777777777888899975 79999999999887764 5667789999999999 999999888766544
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCC-CChHhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDE-KDEKEKTQMAYFF 183 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~ 183 (575)
...+......... ..+....+....+.+++.+...+...+...+..++ +. +++.+
T Consensus 287 ~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g~~~ 342 (390)
T TIGR02718 287 LALLWFAQAAFWL------------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AGTDV 342 (390)
T ss_pred HHHHHHHHHHccc------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hHHHH
Confidence 3322221111000 01122333444455566666667777777676665 56 89999
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHH
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIII 227 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~ 227 (575)
+..+...++|..++|.++|++.+..||+..|++.++..+++.+.
T Consensus 343 ~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 343 TAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998877766655443
No 168
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.09 E-value=2.2e-09 Score=114.56 Aligned_cols=148 Identities=18% Similarity=0.085 Sum_probs=108.3
Q ss_pred HHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccC
Q 008182 40 STMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLR 119 (575)
Q Consensus 40 ~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 119 (575)
..+.+..++|.|+.+ .|.++.+.+.+.+...++..++.++.|+++||+ |||+.+..+.++..++.++.... +.
T Consensus 246 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~---~~-- 318 (426)
T PRK12307 246 ANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRI---PQ-- 318 (426)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHH---cc--
Confidence 334466788999886 599999999999999999999999999999999 99999988887766655444322 11
Q ss_pred CCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHH
Q 008182 120 PRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVT 199 (575)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~ 199 (575)
.....+....+..+.+..+..+..+.++.|.+|++. |++++++.+...++|+.++|.
T Consensus 319 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~~gp~ 375 (426)
T PRK12307 319 -----------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGTFNSM 375 (426)
T ss_pred -----------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHHHHHH
Confidence 011112122222223333334556677899999888 999999999999999999999
Q ss_pred HHhhhcccccchhHHHHH
Q 008182 200 VLVYIQDEISRSVGYGIC 217 (575)
Q Consensus 200 i~~~l~~~~~~~~~f~~~ 217 (575)
+.+++.+..|+....++.
T Consensus 376 ~~g~l~~~~g~~~~~~~~ 393 (426)
T PRK12307 376 AATWLGITMGLGAALTFI 393 (426)
T ss_pred HHHHHHHcccHHHHHHHH
Confidence 999999988866544433
No 169
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.09 E-value=2.1e-09 Score=116.69 Aligned_cols=174 Identities=11% Similarity=0.057 Sum_probs=113.9
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHH-------HHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYK-------TIAIF 98 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~-------~~~~~ 98 (575)
.+|.+.+..++.....+....++|.|+.+++|++..+++.+.+++.++..++++++|+++||+ |||+ ...+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~ 331 (476)
T PLN00028 253 RTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIV 331 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHH
Confidence 345555555555555566777899999999999999999999999999999999999999998 8762 22222
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhh
Q 008182 99 AAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQ 178 (575)
Q Consensus 99 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 178 (575)
.++..+..++.+.. .+.....+..++.+++.+...+...++..+..+ +.
T Consensus 332 ~~l~~i~~~~~~~~------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~------ 380 (476)
T PLN00028 332 QTLGGVFCIWLGRA------------------------NSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS------ 380 (476)
T ss_pred HHHHHHHHHHhccc------------------------chHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh------
Confidence 22222222222221 112333333444455444344444555555443 45
Q ss_pred hhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcC
Q 008182 179 MAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGT 232 (575)
Q Consensus 179 r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 232 (575)
|+...++.+.+.++|+.++|.+.+ ..+..+|+..|++.++..+++.++.++.+
T Consensus 381 ~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 381 LGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred chhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 899999988777888888876654 23345699999998887777776665554
No 170
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.09 E-value=2.6e-09 Score=112.46 Aligned_cols=169 Identities=8% Similarity=-0.012 Sum_probs=131.3
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.++..++..++....+....++++.|+. +.|+++.+.+.+.+...++..+..++.|++.||+ |+|+.+.++++...+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 45666666667666777777788899996 5899999999999988888889999999999998 999999999988888
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
+.++.+.++ +.+.+++..++.|++.+...+....+..+. ++++ +++..+
T Consensus 283 ~~~~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~ 331 (382)
T PRK11128 283 RWGLMGSTT------------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQA 331 (382)
T ss_pred HHHHHHhhh------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHH
Confidence 777666552 366677888889999888777777777665 4444 677777
Q ss_pred hhh-hhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHH
Q 008182 185 RFF-FFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIII 227 (575)
Q Consensus 185 ~~~-~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~ 227 (575)
.+. ....+|..+||.++|.+.+..|+ ..|+..+++.++++++
T Consensus 332 ~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 332 LYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 765 45678889999999999998887 4566555555544433
No 171
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.07 E-value=2.3e-09 Score=109.53 Aligned_cols=161 Identities=10% Similarity=0.044 Sum_probs=120.9
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhc--CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGT--MHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
.++...+..++-...--++..+++.|+.+. +|+++.+.+...+.+..+..+++.+++++.||+ |+||.+.++..+..
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHH
Confidence 344444444443334446678899999854 799999999999999999999999999999999 99999988887777
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
++.++.... +. .. ...+.++.|++.+...|...+...+.++++. +++.
T Consensus 220 ~~~~l~~~~---~~---------------------~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-------~~as 267 (310)
T TIGR01272 220 LLSIGAALT---HG---------------------YV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT-------SQGS 267 (310)
T ss_pred HHHHHHHHc---CC---------------------HH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhhH
Confidence 766544432 11 11 2235557899999999999998888887643 2333
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHH
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVA 220 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~ 220 (575)
++. ....+|+.+.|.+.|.+.|..|.+..|++..+.
T Consensus 268 ai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 268 GIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 443 467799999999999999988998888765543
No 172
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.06 E-value=4.3e-09 Score=110.83 Aligned_cols=172 Identities=12% Similarity=0.029 Sum_probs=118.1
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH
Q 008182 27 AALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGT 106 (575)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~ 106 (575)
.+..+...++...+.+....++++|+.+.+|+++.+.+.+.+...++..++.++.|+++||+ |+|+.+.++..+.+++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 44444444454455555667788899888999999999999999999999999999999998 99999998888888777
Q ss_pred HHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccc-cccCCCCChHhhhhhhhhhhh
Q 008182 107 GMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFG-TDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 107 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~ 185 (575)
++.....+ +.....+..++.++|.....+...... .+..+++. ++...
T Consensus 280 ~~~~~~~~-----------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~-- 328 (382)
T PRK10091 280 LMLFFFGG-----------------------MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAAG-- 328 (382)
T ss_pred HHHHHHHh-----------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHHH--
Confidence 55543211 122334444445555444333333333 33333333 44432
Q ss_pred hhhhHHHhHHHHHHHHhhhccc-ccchhHHHHHHHHHHHHHHHHHh
Q 008182 186 FFFFISLGTLMAVTVLVYIQDE-ISRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 186 ~~~~~~ig~~l~~~i~~~l~~~-~~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
.+...++|..+||.++|++.+. .+|+..+.+.++..+++......
T Consensus 329 ~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 329 GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHH
Confidence 3556789999999999999885 68999999887666655444433
No 173
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.05 E-value=5.3e-09 Score=111.39 Aligned_cols=187 Identities=12% Similarity=0.041 Sum_probs=128.5
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
+..|.+.+..+|..-+|.+...++|.|+++.+ +.........+..+...+.+|++|+++||+ |++|++.++.+...+
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i 328 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAI 328 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHH
Confidence 35788888888877777778789999998865 333333334455677889999999999999 999999999887777
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCCh-----------
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDE----------- 173 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~----------- 173 (575)
+....... .|. ....+...+.+..+.+.++.|....++..++.+.||+++.
T Consensus 329 ~~~~~~l~--lp~----------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~ 390 (462)
T PRK15034 329 FSALLFLT--LPG----------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDE 390 (462)
T ss_pred HHHHHHHH--hcc----------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchh
Confidence 66443332 121 0012345555555555555565566667778777774100
Q ss_pred ----HhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccc-cchhHHHHHHHHHHHHHHHHHhcC
Q 008182 174 ----KEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEI-SRSVGYGICSVAMFMAIIIFLAGT 232 (575)
Q Consensus 174 ----~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~-~~~~~f~~~~~~~~~~~~~~~~~~ 232 (575)
+.+++-+...|+......+|+++.|.+.+...+.. ++...|+...+..+++.++.+...
T Consensus 391 ~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 391 QAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 00113567778888889999999998877776654 488889888888777777665543
No 174
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.04 E-value=1.9e-09 Score=111.83 Aligned_cols=155 Identities=13% Similarity=0.089 Sum_probs=128.0
Q ss_pred chhHHHHHHHHHHHHHHHhhH-HHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIA-VNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
|.++..+...++....++... ...|.|.++.+|.+..+.+.+.....++..++.++.|++.||+ |||+.+..+..+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHH
Confidence 445566666666666666666 6778888777999999999999999999999999999999998 99999988877777
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
++..+..+... +...+++..++.|++.+...+...+++.|.+|+++ |++.+
T Consensus 289 ~~~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~ 339 (365)
T TIGR00900 289 LAILVVGLTPP-----------------------NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGRVF 339 (365)
T ss_pred HHHHHHHhhch-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHH
Confidence 76666655411 24556777888999999888999999999999888 99999
Q ss_pred hhhhhhHHHhHHHHHHHHhhhccccc
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEIS 209 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~ 209 (575)
++.+...++|..++|.++|++.+..|
T Consensus 340 ~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 340 GAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999987543
No 175
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.04 E-value=4.9e-09 Score=113.44 Aligned_cols=178 Identities=15% Similarity=0.036 Sum_probs=122.0
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH--------H
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTI--------A 96 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~--------~ 96 (575)
+.+|...+..++....++....++|.|+.+.+|++..+.++..++..++..++.+++|+++||+ ++|+.. .
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~~ 339 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKIF 339 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHHH
Confidence 4678888888999999999999999999999999999999999999999999999999999997 644211 1
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhh
Q 008182 97 IFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEK 176 (575)
Q Consensus 97 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 176 (575)
.+......+..++..... . .+....++...+.+.+.+...+.......|..|. .
T Consensus 340 ~~~~~~~~~~~~~~~~~~-~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~---- 393 (465)
T TIGR00894 340 NGIGGLGPGIFAYALPYL-S--------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-F---- 393 (465)
T ss_pred HHHHHHHHHHHHHHHHHc-C--------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-H----
Confidence 111111111111111100 0 0122233333344444444444444444555543 4
Q ss_pred hhhhhhhhhhhhhHHHhHHHHHHHHhhhcccc---cchhHHHHHHHHHHHHHHHHHhc
Q 008182 177 TQMAYFFSRFFFFISLGTLMAVTVLVYIQDEI---SRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 177 ~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~---~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
++...++.+...++|+.++|.+.|++.+.. +|+.+|++.++..+++.+.....
T Consensus 394 --~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 394 --LGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 899999999999999999999999987643 48888888887777766655443
No 176
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.03 E-value=1.9e-09 Score=115.43 Aligned_cols=162 Identities=16% Similarity=0.056 Sum_probs=123.3
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.++..++..++..++++......+.|++..++ ++.+.+.+.....++..++.++.|+++||+ |||+++.++.++..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 456667777777777777666666666666666 566777788888899999999999999999 999999999888888
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHh-hhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKE-KTQMAYFF 183 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~ 183 (575)
+.++..+.. .+...+++..++.+++.+...+...++++|..+.++.+. .+.++..+
T Consensus 300 ~~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 356 (437)
T TIGR00792 300 GYLIFFFAG-----------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVY 356 (437)
T ss_pred HHHHHHHcc-----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHH
Confidence 776665531 124455666777888888888888999999876432110 11278889
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccch
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISRS 211 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~~ 211 (575)
++.++...+|..+++.+.|++.+..||.
T Consensus 357 ~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 357 SVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999998777663
No 177
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.03 E-value=4.5e-09 Score=111.17 Aligned_cols=171 Identities=13% Similarity=0.057 Sum_probs=127.8
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcC---CCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTM---HLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQ 102 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 102 (575)
.++..+...++....+.......+.|+.+.+ +.+....+.+.+...+...++.+..|++.||+ |||+.+.++.++.
T Consensus 216 ~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~ 294 (396)
T TIGR00882 216 KFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIM 294 (396)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHH
Confidence 3444555555555555455566788887765 55666778888888888889999999999999 9999999998888
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 103 TLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
+++..+...++ +...+++.+++.+++..........+..+..+++. +++.
T Consensus 295 ~l~~~~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~ 344 (396)
T TIGR00882 295 SVRIIGSSFAT------------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATI 344 (396)
T ss_pred HHHHHHHHhcC------------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEe
Confidence 88777665542 25556777888888766554455556666677666 7776
Q ss_pred hhh-hhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHH
Q 008182 183 FSR-FFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIII 227 (575)
Q Consensus 183 ~~~-~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~ 227 (575)
.+. ++....+|..+++.++|++.+..||+.+|.+.++..++..++
T Consensus 345 ~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 345 YLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred ehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 666 567889999999999999999999999999877776655444
No 178
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.02 E-value=1.6e-09 Score=112.82 Aligned_cols=162 Identities=14% Similarity=0.060 Sum_probs=117.7
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH--HH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAA--VQ 102 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~--~~ 102 (575)
|.++.+.+..++.....+.+..+++.|+.+.+|++..+.+.+.+.+.++..++.++.|+++||..+||+....... ..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 4566667777777777778888999999999999999999999999999999999999999986244443322211 11
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 103 TLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
.++....... +. .+.....+..++.|+......+....+..|.+|++. |+++
T Consensus 296 ~~~~~~~~~~---~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~ 347 (379)
T TIGR00881 296 IVSLLVYWLN---PA-------------------ANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AGTA 347 (379)
T ss_pred HHHHHHHhcC---cc-------------------hhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hHHH
Confidence 1111111111 11 123334444555565544455555677899999888 9999
Q ss_pred hhhhhhhHHHhHHHHHHHHhhhcccccchhHH
Q 008182 183 FSRFFFFISLGTLMAVTVLVYIQDEISRSVGY 214 (575)
Q Consensus 183 ~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f 214 (575)
.++.+...++|..++|.+.|.+.+..||+..|
T Consensus 348 ~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 348 AGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 99999999999999999999999999998764
No 179
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.01 E-value=1.7e-07 Score=94.80 Aligned_cols=155 Identities=18% Similarity=0.120 Sum_probs=107.4
Q ss_pred HHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcc
Q 008182 50 TYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATH 129 (575)
Q Consensus 50 ~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 129 (575)
..+-++.|++..|.+.+...-.+.+.+..++.|.++||+ ||||..++..+++++..+.--.
T Consensus 58 Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~------------------ 118 (354)
T PF05631_consen 58 YALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHS------------------ 118 (354)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhc------------------
Confidence 344467999999999999999999999999999999999 9999999999888887754322
Q ss_pred cccCccchhhHHHHHHHHHHHHcccccccchhccc-cccCCCCChHhhhhhhhhhhhhh-hhHHHhHHHHHHHHhhhccc
Q 008182 130 TCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFG-TDQFDEKDEKEKTQMAYFFSRFF-FFISLGTLMAVTVLVYIQDE 207 (575)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~-~~~~ig~~l~~~i~~~l~~~ 207 (575)
.++..++++|++.|++......+-.+.. .|+-...-+++. .+.-++... ..+.+-.+++.+++-++.+.
T Consensus 119 -------~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~--L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~ 189 (354)
T PF05631_consen 119 -------SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEW--LSDTFSLATFFGNGVVAIGAGVVANVLADW 189 (354)
T ss_pred -------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH--HHHHHHHHHHHHhHHHHHHHhHHHHHHHHH
Confidence 2488899999999999999888777754 443222211111 333333322 22233334444455555555
Q ss_pred cc--chhHHHHHHHHHHHHHHHHHhcC
Q 008182 208 IS--RSVGYGICSVAMFMAIIIFLAGT 232 (575)
Q Consensus 208 ~~--~~~~f~~~~~~~~~~~~~~~~~~ 232 (575)
.+ ...+|..+.+..+++.++.....
T Consensus 190 ~~~g~vaPF~~a~~~l~~~~~~I~~~W 216 (354)
T PF05631_consen 190 FGFGPVAPFDAAIVLLAVAAVLILKTW 216 (354)
T ss_pred hCCCCcchHHHHHHHHHHHHHHHHhcc
Confidence 44 47899888877776666544433
No 180
>PRK10054 putative transporter; Provisional
Probab=99.00 E-value=4.7e-09 Score=111.12 Aligned_cols=174 Identities=10% Similarity=-0.017 Sum_probs=131.6
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhh--cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVG--TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQ 102 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 102 (575)
|.++...+..++..+.+.......+.|+.. +.+.+....+.+...........+++.|++.||+ ++|+.+.+++.+.
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~ 284 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCF 284 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHH
Confidence 455556666666666655555666777653 4456666777777777777777788999999998 9999999998888
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 103 TLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
.++.....+..+ +.+.+.++.++.++|.+...|.....+.+..|++. |++.
T Consensus 285 ~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~~ 335 (395)
T PRK10054 285 VIGLVGFIFSGN-----------------------SLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KASY 335 (395)
T ss_pred HHHHHHHHHcch-----------------------HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ceeh
Confidence 888766655311 24445667788999988888888888999998887 8888
Q ss_pred hhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHH
Q 008182 183 FSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFL 229 (575)
Q Consensus 183 ~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 229 (575)
++... ...+|..+||.++|++.+..|....|++.++...++++...
T Consensus 336 ~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 336 FSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 88654 56689999999999999999999888886666665555554
No 181
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.99 E-value=1.3e-08 Score=108.01 Aligned_cols=173 Identities=13% Similarity=0.166 Sum_probs=113.1
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHH-HHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 27 AALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFM-GTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
++..++..++...+.+....+.++|+.+++|+++.+.+++..... .+..++.+++|++.||+ |||+.+.++..+..+.
T Consensus 211 ~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~ 289 (402)
T PRK11902 211 AWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVS 289 (402)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHH
Confidence 444444444444433333344556777889999999999887654 45788999999999999 9999888777666655
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHH----HHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIAL----YLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
.+........+. +.+.+++.. +..+++.+...+....++.+.+|.++ +
T Consensus 290 ~l~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~-- 341 (402)
T PRK11902 290 NLGYWVLAVTPK--------------------HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------Y-- 341 (402)
T ss_pred HHHHHHHHhcCC--------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------H--
Confidence 443322111111 133344333 33455566666666677777766444 3
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHh
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
+++....++|..+++.++|++.+..||+..|.+.++..+++.++...
T Consensus 342 --~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 342 --ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 44444556777766778999999999999999988877776555443
No 182
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.99 E-value=8e-09 Score=107.53 Aligned_cols=156 Identities=15% Similarity=-0.001 Sum_probs=118.8
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.++.+.+..++....++....++|.|+++ .|++..+.+.+.+.+.++..+++++.|+++||+-+||+.+.++.++.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 275 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLV 275 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Confidence 445656666666777788888899999975 6999999999999999999999999999999983456677777777777
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
+.+++.+..+ .... ...++.|++.+...+...+.+.+..++++. ++..++
T Consensus 276 ~~~~~~~~~~------------------------~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~-----~g~~~~ 325 (355)
T TIGR00896 276 GLCGLLFAPM------------------------HGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQ-----AAALSA 325 (355)
T ss_pred HHHHHHHhhh------------------------hHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHH-----HHHHHH
Confidence 7766655421 1111 234677999988888877777665554331 688888
Q ss_pred hhhhhHHHhHHHHHHHHhhhccccc-ch
Q 008182 185 RFFFFISLGTLMAVTVLVYIQDEIS-RS 211 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~~~~-~~ 211 (575)
+.+...++|..++|.+.|++.+..| |.
T Consensus 326 ~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 326 MAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 8888889999999999999988775 44
No 183
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.99 E-value=1.7e-08 Score=105.80 Aligned_cols=163 Identities=8% Similarity=0.033 Sum_probs=118.0
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
.++...+...+....++....+.|.|+.+++|.++.+.+.+.....++..++.++.|++.||+ |||+.+.++..+..++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~ 285 (385)
T TIGR00710 207 MFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVS 285 (385)
T ss_pred hhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 345555555555666677777888899989999999999999999999999999999999999 9999999888887777
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
.+++......+. .....+++..++.|++.+...+.......|.+| ++ |+++.++
T Consensus 286 ~~~~~~~~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~ 339 (385)
T TIGR00710 286 AVLLEITAILGL-------------------GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HV------AGTASAL 339 (385)
T ss_pred HHHHHHHHHhcc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc------chHHHHH
Confidence 766655421110 123344555667888888888888888888776 45 8888998
Q ss_pred hhhhHHH-hHHHHHHHHhhhcccccchhHHHH
Q 008182 186 FFFFISL-GTLMAVTVLVYIQDEISRSVGYGI 216 (575)
Q Consensus 186 ~~~~~~i-g~~l~~~i~~~l~~~~~~~~~f~~ 216 (575)
.+..... |...++ +.+.+.+..+|...+..
T Consensus 340 ~~~~~~~~g~i~~~-~~~~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 340 FGTLRLVLGAIVGY-LVSLIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHHHHHH-HHHhccccChHHHHHHH
Confidence 7776655 455555 45566555555544443
No 184
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.98 E-value=6.1e-09 Score=113.87 Aligned_cols=169 Identities=14% Similarity=0.087 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHH------------HHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHH
Q 008182 32 GIELCERLSTMGIAVNLVTYLVGTMHLPSATSAN------------IVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFA 99 (575)
Q Consensus 32 ~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~ 99 (575)
...++..+.+|++..++|.+++ ++|++..+.+. ...+..++..++.+++++++||+ |||++++++.
T Consensus 295 ~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~ 372 (502)
T TIGR00887 295 GSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGF 372 (502)
T ss_pred HHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHH
Confidence 3445566788888888888885 57877543221 12233445556788999999999 9999999988
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhh
Q 008182 100 AVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQM 179 (575)
Q Consensus 100 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 179 (575)
.+.+++.++.++...... +...+....+...++..+..+....+.+|.+|++. |
T Consensus 373 ~~~~~~~~~l~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------R 426 (502)
T TIGR00887 373 FILTVLFFVLGFAYNHLS--------------------THGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------R 426 (502)
T ss_pred HHHHHHHHHHHHHHHhcc--------------------hhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhH------H
Confidence 887777666655421000 01111111111222222234556677899999999 9
Q ss_pred hhhhhhhhhhHHHhHHHHHHHHhhhccc----------ccchhHHHHHHHHHHHHHHHH
Q 008182 180 AYFFSRFFFFISLGTLMAVTVLVYIQDE----------ISRSVGYGICSVAMFMAIIIF 228 (575)
Q Consensus 180 ~~~~~~~~~~~~ig~~l~~~i~~~l~~~----------~~~~~~f~~~~~~~~~~~~~~ 228 (575)
+++.++.+....+|++++|.+.+++.+. .++...|++.++..+++.+..
T Consensus 427 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~ 485 (502)
T TIGR00887 427 STAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT 485 (502)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998773 334556776666655554443
No 185
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.97 E-value=2e-08 Score=108.89 Aligned_cols=157 Identities=10% Similarity=-0.026 Sum_probs=112.3
Q ss_pred HHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcc
Q 008182 50 TYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATH 129 (575)
Q Consensus 50 ~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 129 (575)
+++.+++|.+..+..+......+...++.+++|+++||+ |||+.++.+.++.+++.++++.....+.
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~~------------ 361 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQA------------ 361 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcCc------------
Confidence 344457898888777777778888899999999999999 9999999999998888877765421111
Q ss_pred cccCccchhhHHHHHHHHHHHHcccc-cccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhh-----
Q 008182 130 TCEQASGFQMGVLYIALYLIALGTGG-LKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVY----- 203 (575)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~----- 203 (575)
. ......+..+.+.+.+. ..|....+++|.+|++. |++++++.+...++|..+++.+.+.
T Consensus 362 -------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~ 427 (479)
T PRK10077 362 -------P-GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPMMDKNS 427 (479)
T ss_pred -------c-cHHHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHHHHhcc
Confidence 0 11222333344443332 34677889999999888 9999999999888888888655554
Q ss_pred -hcccccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 204 -IQDEISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 204 -l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
+.+..+|+..|++.++..+++.+..++..+
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (479)
T PRK10077 428 WLVAHFHNGFSYWIYGCMGVLAALFMWKFVP 458 (479)
T ss_pred chhhhccCccHHHHHHHHHHHHHHHHHhccc
Confidence 445678888888877666666555444433
No 186
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.97 E-value=3.7e-09 Score=114.71 Aligned_cols=156 Identities=13% Similarity=0.062 Sum_probs=127.9
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.++..++..++..+.+++...++|.|+++.+|+++.+.++......++..++.+++|++.||+ |||+.+.++..+.++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 4556667777778888888889999999999999999999999999999999999999999998 999999999888888
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
+..+..+... +. .+...+....++.|+|.+...+.......+..|+++ |+++.+
T Consensus 334 ~~~~~~~~~~-~~-------------------~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~~~ 387 (485)
T TIGR00711 334 GFYWRAFTFT-PD-------------------TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARGSS 387 (485)
T ss_pred HHHHHhccCC-CC-------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHHHH
Confidence 7776653211 11 124445566778899988877777777778788777 999999
Q ss_pred hhhhhHHHhHHHHHHHHhhhccc
Q 008182 185 RFFFFISLGTLMAVTVLVYIQDE 207 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~~ 207 (575)
+.+...++|+.+|+.+.+.+.+.
T Consensus 388 ~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 388 LSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888664
No 187
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.96 E-value=5.5e-09 Score=106.95 Aligned_cols=176 Identities=14% Similarity=0.134 Sum_probs=143.9
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
.+...++..+.-+=+.-++......|...++|+++.+...+.....+..++++++.|+|.||+ |.|+++.+++++..+.
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~~ 331 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSIA 331 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHHH
Confidence 455566666665555556777788899999999999999999999999999999999999999 9999999999888877
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
.+..-+. ++...+++.-++.|+..|...+..-++.++..|+++ -++.||+
T Consensus 332 ~~~~~~~------------------------~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fFgl 381 (438)
T COG2270 332 ALYLIFL------------------------EGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFFGL 381 (438)
T ss_pred HHHHHHc------------------------cccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccceeeh
Confidence 6555443 123345666678899999999999999999999998 8999999
Q ss_pred hhhhHHHhHHHHHHHHhhhccccc-chhHHHHHHHHHHHHHHHHHhcC
Q 008182 186 FFFFISLGTLMAVTVLVYIQDEIS-RSVGYGICSVAMFMAIIIFLAGT 232 (575)
Q Consensus 186 ~~~~~~ig~~l~~~i~~~l~~~~~-~~~~f~~~~~~~~~~~~~~~~~~ 232 (575)
+.+.....+.+||...+.+.+.++ -|..+....++..+++++++..+
T Consensus 382 yaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~ 429 (438)
T COG2270 382 YALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVK 429 (438)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeec
Confidence 999999999999999999988665 67777666666666666655443
No 188
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.96 E-value=1.1e-08 Score=111.46 Aligned_cols=173 Identities=15% Similarity=0.087 Sum_probs=143.2
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH
Q 008182 27 AALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGT 106 (575)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~ 106 (575)
+..++...++..+....+...+|.+.++.+|.++...|++.+++.++..++.++.+++.+|+ ++++.+..+.++++++.
T Consensus 220 l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~ 298 (524)
T PF05977_consen 220 LRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALAL 298 (524)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHH
Confidence 33344444455555555667789999999999999999999999999999999999999998 99999999998888888
Q ss_pred HHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhh
Q 008182 107 GMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRF 186 (575)
Q Consensus 107 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 186 (575)
+.++++.+ .+..+++.++.|++........++.+....|++. ||+.++++
T Consensus 299 ~~lal~~~------------------------~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si~ 348 (524)
T PF05977_consen 299 LLLALSPS------------------------FWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSIY 348 (524)
T ss_pred HHHhcchH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHHH
Confidence 88887632 5566777788888888887888888888899988 99999999
Q ss_pred hhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHh
Q 008182 187 FFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 187 ~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
.+....+..+|..+.|.+.+..|.+..+.++++..+++.++...
T Consensus 349 ~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 349 QMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888877766555555443
No 189
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.95 E-value=7e-09 Score=113.22 Aligned_cols=154 Identities=12% Similarity=-0.001 Sum_probs=128.4
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.+....+..++....+++...+++.|+++.+|+++.+++.....+.++..++.++.|++.||+ |||+.+..+.++.++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 4455666777777788888888999999999999999999999999999999999999999999 999999989888888
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
+.+++..... . .+.....+..++.|+|.|...+.....+.+..|+++ ++.+.+
T Consensus 338 ~~~~l~~~~~--~-------------------~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~~~ 390 (495)
T PRK14995 338 SFYGLAMTDF--S-------------------TQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAAGA 390 (495)
T ss_pred HHHHHHHhcC--C-------------------CchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchHHH
Confidence 7766654311 0 123345566788899999888888888888888888 999999
Q ss_pred hhhhhHHHhHHHHHHHHhhhcc
Q 008182 185 RFFFFISLGTLMAVTVLVYIQD 206 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~ 206 (575)
.++...++|+.+|+.+.+.+.+
T Consensus 391 ~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 391 IETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988854
No 190
>TIGR00895 2A0115 benzoate transport.
Probab=98.95 E-value=6.5e-09 Score=109.12 Aligned_cols=147 Identities=13% Similarity=0.039 Sum_probs=113.7
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
..+.+.+..++....++....++| ++.+++|.+..+.+...+...++..++.+++|+++||+ |||+.+....+ ..+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~-~~~~ 327 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLL-GAVF 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHH-HHHH
Confidence 344455556666777777777777 66678899999999999999999999999999999999 99855444333 3333
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
..++.... .+...+++..++.|++.+...+...+++.|.+|+++ |++++++
T Consensus 328 ~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~ 378 (398)
T TIGR00895 328 AVLVGSTL-----------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGVGW 378 (398)
T ss_pred HHHHHHHh-----------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHHHH
Confidence 22222210 124456667778889888888999999999999888 9999999
Q ss_pred hhhhHHHhHHHHHHHHhhh
Q 008182 186 FFFFISLGTLMAVTVLVYI 204 (575)
Q Consensus 186 ~~~~~~ig~~l~~~i~~~l 204 (575)
.+...++|..++|.++|++
T Consensus 379 ~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 379 AIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHhHHhc
Confidence 9999999999999999876
No 191
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.93 E-value=4e-08 Score=103.97 Aligned_cols=166 Identities=10% Similarity=-0.035 Sum_probs=118.9
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
.++..++..++...+.++...++++++.+++|+++.+.+.+...+.++..++.++.|++.||. +|+..+....+...++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~~l~~~~~~~~~~~ 295 (394)
T PRK10213 217 GVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKLALAGAPLVLAVSA 295 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHH
Confidence 455555555565566666667765555567899999999999999999999999999999996 5444343333333333
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
.++..... +.+.+.+..++.|++.+...+...+++.+..|+ + +++..+.
T Consensus 296 ~~l~~~~~------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~ 344 (394)
T PRK10213 296 LVLTLWGS------------------------DKIVATGVAIIWGLTFALVPVGWSTWITRSLAD-Q------AEKAGSI 344 (394)
T ss_pred HHHHHHhh------------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-c------HHHHHHH
Confidence 33333221 244566677888999988888888888887764 3 4455666
Q ss_pred hhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHH
Q 008182 186 FFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFM 223 (575)
Q Consensus 186 ~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~ 223 (575)
.....++|..+|+.++|++.+..|++..++..++..++
T Consensus 345 ~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~ 382 (394)
T PRK10213 345 QVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLL 382 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHH
Confidence 66777899999999999999999999888877655443
No 192
>PRK10133 L-fucose transporter; Provisional
Probab=98.92 E-value=2.3e-08 Score=107.40 Aligned_cols=167 Identities=17% Similarity=0.141 Sum_probs=125.1
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHh-hhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 27 AALVLGIELCERLSTMGIAVNLVTYL-VGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~l~~yl-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
++...+..++.....++...+++.|+ ++.+|+++.+.+.....+.++..++++++|++.||+ |||+++..+.++..++
T Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 338 (438)
T PRK10133 260 WRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMAL 338 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 44444555666666666777888896 567899999999999999999999999999999999 9999998887776665
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
..+..+. +. . ..+....+.|++.+...|...+...+.++++ .+.+.++
T Consensus 339 ~~~~~~~---~~---------------------~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-------~~~as~l 386 (438)
T PRK10133 339 CLISAFA---GG---------------------H-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-------TKYGSSF 386 (438)
T ss_pred HHHHHHc---CC---------------------h-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-------hccchhH
Confidence 5444333 11 1 1244567789999999999999999987753 3445555
Q ss_pred hhhhHHHhHHHHHHHHhhhccccc-chhHHHHHHHHHHHHHHH
Q 008182 186 FFFFISLGTLMAVTVLVYIQDEIS-RSVGYGICSVAMFMAIII 227 (575)
Q Consensus 186 ~~~~~~ig~~l~~~i~~~l~~~~~-~~~~f~~~~~~~~~~~~~ 227 (575)
..+ ..+|+.++|.+.|++.+..| -+..|+++.+..+..+..
T Consensus 387 ~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 387 IVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 433 44688889999999999887 788888766655544444
No 193
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.92 E-value=1.9e-08 Score=106.76 Aligned_cols=154 Identities=8% Similarity=0.037 Sum_probs=112.9
Q ss_pred hHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q 008182 44 IAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPC 123 (575)
Q Consensus 44 ~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 123 (575)
...++|.|+++..+ ++.+.+++.++..+....+..+.+++.||.++.++.+..+.++..++..+++++.+
T Consensus 227 ~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~--------- 296 (400)
T PRK11646 227 VMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSN--------- 296 (400)
T ss_pred HHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhh---------
Confidence 45677888876655 77888888887777666555555666665437677777888777777776665522
Q ss_pred CCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhh
Q 008182 124 KETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVY 203 (575)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~ 203 (575)
...+.+...+.++|.+...|...+++.+..|+++ |++.+++++...++|..+||.++|+
T Consensus 297 ---------------~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l~G~ 355 (400)
T PRK11646 297 ---------------LQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIGGGW 355 (400)
T ss_pred ---------------HHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccchHH
Confidence 4445556677888888888888999999999988 9999999999999999999999999
Q ss_pred hcccc---c-chhHHHHHHHHHHHHHHHH
Q 008182 204 IQDEI---S-RSVGYGICSVAMFMAIIIF 228 (575)
Q Consensus 204 l~~~~---~-~~~~f~~~~~~~~~~~~~~ 228 (575)
+.+.. + ...+|++.++..+...+..
T Consensus 356 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (400)
T PRK11646 356 LFDLGKALNQPELPWMMLGIIGLITLLAL 384 (400)
T ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHHHH
Confidence 98864 2 3455555555545444443
No 194
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.89 E-value=2.2e-08 Score=120.56 Aligned_cols=165 Identities=12% Similarity=0.080 Sum_probs=131.0
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCch-hhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSA-TSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
+.++..++..++.....+....+++.|+.+.+|++.. +.+++.+...++..++.+++|+++||+ ++++.+.++.++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~ 310 (1146)
T PRK08633 232 RVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLA 310 (1146)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHH
Confidence 3445555555555566666778899999999999999 999999999999999999999999998 99999988888887
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
++.+++.+.. +...+++..++.|++.+...+...+++.+..|++. |++++
T Consensus 311 ~~~~~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~ 360 (1146)
T PRK08633 311 LSLFLLPTAP------------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVL 360 (1146)
T ss_pred HHHHHHHHhh------------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhh
Confidence 7777666552 25556677788899989888888999999999998 99999
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcc-cccchhHHHHHHHH
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQD-EISRSVGYGICSVA 220 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~-~~~~~~~f~~~~~~ 220 (575)
++.++..++|..+++.+++.+.. ..++...|++.+.+
T Consensus 361 ~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 361 AANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99999999999888877776644 23455555554443
No 195
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.87 E-value=2.2e-08 Score=120.50 Aligned_cols=183 Identities=13% Similarity=-0.098 Sum_probs=133.8
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.++..++..++..+.++.+..++|.|+.+.+|.+..+.+++.+.+.++..++.++.|+++|+. ++++.+..+.++.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 4566777777777777778888999999999999999999999999999999999999999987 777766666655555
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCccccc--CccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCE--QASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
+.+.+++... ..... . ...... .....+.+.++++.+++|++.+...+...+++.+.+|++. |+++
T Consensus 304 ~~~~l~~~~~-~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v 371 (1140)
T PRK06814 304 FGLDLAFASS-SVPAE--P---AQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARV 371 (1140)
T ss_pred HHHHHHhccc-ccccc--c---ccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceee
Confidence 5444433200 00000 0 000000 0000124556677888899999988889999999999999 9999
Q ss_pred hhhhhhhHHHhHHHHHHHHhhhcc-cccchhHHHHHHHH
Q 008182 183 FSRFFFFISLGTLMAVTVLVYIQD-EISRSVGYGICSVA 220 (575)
Q Consensus 183 ~~~~~~~~~ig~~l~~~i~~~l~~-~~~~~~~f~~~~~~ 220 (575)
++..++..++|..+++++++.+.+ ..++...|++.++.
T Consensus 372 ~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 372 IAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 999999999999999999999874 44666666654443
No 196
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.87 E-value=6.9e-08 Score=101.16 Aligned_cols=167 Identities=11% Similarity=-0.051 Sum_probs=114.0
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchH---HHHHH-HHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRY---KTIAI-FAA 100 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~---~~~~~-~~~ 100 (575)
|.+|.+.+..++....+|++..++|.|+++ .|++.. .+........... +..++++||. .|| +.... ...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~---~g~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGL---IGVAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHH---HHHHHhhHHh-hhhhhHHHHHHHHHH
Confidence 567888889999999999999999999965 678764 5555555554444 4457888886 543 33232 333
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhh
Q 008182 101 VQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA 180 (575)
Q Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 180 (575)
+.+++..+.+... +....++...+.+++.....+...++.+|.+|++. |+
T Consensus 266 ~~a~~~~~~~~~~------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------rg 315 (368)
T TIGR00903 266 LIAAFFLALAFEL------------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------HG 315 (368)
T ss_pred HHHHHHHHHHHcc------------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------cC
Confidence 3333333333221 12223333444556666666777889999999999 99
Q ss_pred hhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHH
Q 008182 181 YFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFL 229 (575)
Q Consensus 181 ~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 229 (575)
++.|+.+...++|+.++|.+.+.+.. +.+..|.+.++..+++.+...
T Consensus 316 t~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 316 KAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887763 666777776666666555543
No 197
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.86 E-value=5.3e-08 Score=104.24 Aligned_cols=163 Identities=19% Similarity=0.163 Sum_probs=134.7
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.+..++...++..+++....+..+.|++..+|.+ ...+.+..+..+...++.++.++++||+ |+||++..+.++.++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 56777888888888888888888888888888877 5677888889999999999999999999 999999999999999
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhh-hhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEK-TQMAYFF 183 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~ 183 (575)
+.++..+... .+.+.+++..++.|++.+...+...++++|..+.++.+.. ...+..+
T Consensus 303 ~~~~~~~~~~----------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~ 360 (428)
T PF13347_consen 303 GFLLLFFLGP----------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYF 360 (428)
T ss_pred HHHHHHHHHh----------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHH
Confidence 9988877731 2477788888999999999999999999999985542211 1157778
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccch
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISRS 211 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~~ 211 (575)
+.+.....+|..+++.+.+.+.+..|+.
T Consensus 361 s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 361 SVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 8899999999999999999886655543
No 198
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.84 E-value=1.3e-07 Score=94.98 Aligned_cols=173 Identities=14% Similarity=0.027 Sum_probs=139.2
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
+..|.+.+..-..++.+|.+..++|.++.+ .|+|..++|.+.+...+.+....+..-++++|...+|+..+.....+.+
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~ 286 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV 286 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 357777777778999999999999999885 5999999999999999999999999999999887888888888888888
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
|.+-+.+.+ . +.. +...+++|+|.|...|....++.+..++.+. -++..+
T Consensus 287 G~~G~~~~P---~--------------------~~~--~lw~~llG~G~G~~F~laL~li~~rs~~a~~-----Aa~LSg 336 (395)
T COG2807 287 GLVGLLLAP---G--------------------QLP--ILWALLLGLGQGGAFPLALTLILLRSSDAAI-----AAALSG 336 (395)
T ss_pred HHHHHHHhh---h--------------------hHH--HHHHHHHhCccchHHHHHHHHHHhhcCChHH-----HHHHHH
Confidence 888777762 2 222 2224789999999999999999998766541 566666
Q ss_pred hhhhhHHHhHHHHHHHHhhhccccc-chhHHHHHHHHHHHHHHHH
Q 008182 185 RFFFFISLGTLMAVTVLVYIQDEIS-RSVGYGICSVAMFMAIIIF 228 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~~~~-~~~~f~~~~~~~~~~~~~~ 228 (575)
..+-.+.+=.+.||.+.|++.|..| |+.+++..+...+...+.-
T Consensus 337 maQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 337 MAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFG 381 (395)
T ss_pred HhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 7777777778889999999998765 9888876665554444443
No 199
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.84 E-value=2e-08 Score=108.92 Aligned_cols=176 Identities=16% Similarity=0.182 Sum_probs=150.0
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccc--hHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLG--RYKTIAIFAAVQ 102 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G--r~~~~~~~~~~~ 102 (575)
+.++.+.+...+..++++.-..+++.|.+ ..+++..+++.++++..+...+++++.|+++|+. . ++.+..++++..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 56777888888888888888899999988 8899999999999999999999999999999998 6 344555556666
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhh
Q 008182 103 TLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
.+..+.++++++ +..++..-+++|+..|......+..+.|..+.++ ...+
T Consensus 376 gl~~~~~p~~~~------------------------~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~~a 425 (509)
T KOG2504|consen 376 GLARLFLPFATT------------------------YVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LSNA 425 (509)
T ss_pred HHHHHHHHHhcc------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cchH
Confidence 666666666632 6667777888999999888888888999999988 9999
Q ss_pred hhhhhhhHHHhHHHHHHHHhhhccccc-chhHHHHHHHHHHHHHHHHHhcC
Q 008182 183 FSRFFFFISLGTLMAVTVLVYIQDEIS-RSVGYGICSVAMFMAIIIFLAGT 232 (575)
Q Consensus 183 ~~~~~~~~~ig~~l~~~i~~~l~~~~~-~~~~f~~~~~~~~~~~~~~~~~~ 232 (575)
+|+...+..++..+||.+.|++.+..+ |...|+.+++..+++..++++..
T Consensus 426 ~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 426 YGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 999999999999999999999999887 99999999988888877766655
No 200
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.83 E-value=1.2e-07 Score=100.27 Aligned_cols=161 Identities=10% Similarity=-0.024 Sum_probs=118.4
Q ss_pred HHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 008182 38 RLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQ 117 (575)
Q Consensus 38 ~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~ 117 (575)
..........++.|+.+.+|.++.+.|.+.....++..++.++.+++.||. ++++.+..++. .++...+.++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~-~~~~~~~~~~~~---- 291 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGIL-MGLVVLLMALQH---- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHH-HHHHHHHHHHHh----
Confidence 344445556677888888999999999999999999999999999999998 99988877753 333333333321
Q ss_pred cCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHH
Q 008182 118 LRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMA 197 (575)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~ 197 (575)
+.+...+..++.|++.+...+...+.+.+..|++. + ++++++..+...++|..++
T Consensus 292 --------------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-~----~g~~~a~~~~~~~~~~~~~ 346 (393)
T PRK11195 292 --------------------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-G----AGHSIAVQNFNENLAMLLM 346 (393)
T ss_pred --------------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-c----chhHHHHHhHHHHHHHHHH
Confidence 24445566677888888877777888777544322 1 6889999999999999999
Q ss_pred HHHHhhhcccccchhHHHHHHHHHHHHHHHHHh
Q 008182 198 VTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 198 ~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
..+.+.+ +..|-+..+++.+...++.+.+.+.
T Consensus 347 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (393)
T PRK11195 347 LGLYSLL-VKLGVPVVAVIVGFGLLVALAMALL 378 (393)
T ss_pred HHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 9888866 4578777777766655555444433
No 201
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.82 E-value=5.6e-07 Score=94.56 Aligned_cols=138 Identities=15% Similarity=0.306 Sum_probs=98.0
Q ss_pred ccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceeh
Q 008182 367 SLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVF 446 (575)
Q Consensus 367 ~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (575)
....++-..-+++-++..++ .+| .+..+.+..|+++..+-++.+..+ .++|
T Consensus 410 v~~a~~~~gEI~~~ffs~kl----I~k------iGHv~v~~lgLa~~~~Rf~~~S~L-------------------~n~W 460 (618)
T KOG3762|consen 410 VVSALCHAGEILFYFFSFKL----IEK------IGHVNVMYLGLACNVGRFLYYSYL-------------------QNPW 460 (618)
T ss_pred ehhhhhccchHHHHHHHHHH----HHH------hcccceeeehhhHHHHHHHHHHHh-------------------cCch
Confidence 34445555555555555544 343 223334778888888888888765 4666
Q ss_pred hhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHH-HHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcccc
Q 008182 447 LLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTL-SLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGR 525 (575)
Q Consensus 447 ~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~-~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~ 525 (575)
.+++.-++.|+..+++..+.-+|+...+|+++|.++.++..... .+|..+|+++.|.+.+..+
T Consensus 461 ~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg---------------- 524 (618)
T KOG3762|consen 461 MVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG---------------- 524 (618)
T ss_pred heeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh----------------
Confidence 67788999999999999999999999999999999999987665 6888888888887654322
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhh
Q 008182 526 LDLFYGLLAILSIINLVIYLICAV 549 (575)
Q Consensus 526 ~~~~f~~~a~l~~v~~~~~~~~~~ 549 (575)
....|...++.+++..+.+...-+
T Consensus 525 ~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 525 ARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhh
Confidence 245566666666666665555443
No 202
>PRK09848 glucuronide transporter; Provisional
Probab=98.81 E-value=3.3e-08 Score=106.51 Aligned_cols=163 Identities=15% Similarity=0.149 Sum_probs=123.5
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.++..++..++...+++......+.|+++.+|.+....++......++..++.++.++++||+ |+|+++.++.++..+
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4566666777777777777777777888888898776665555555667788999999999999 999999999988888
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHh-hhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKE-KTQMAYFF 183 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~ 183 (575)
+.+++.+. +. .+.+.+++..++.++|.+...+...++.+|..|+++.+. +..++..+
T Consensus 307 ~~~~~~~~---~~-------------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~ 364 (448)
T PRK09848 307 GYLLFFWV---SV-------------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTY 364 (448)
T ss_pred HHHHHHHc---Cc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHH
Confidence 87766553 11 234556667778899999999999999999887653211 01158888
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccc
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISR 210 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~ 210 (575)
+.+++...+|..+++.+.+.+.+..||
T Consensus 365 ~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 365 SLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 899999999999999999888665554
No 203
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.80 E-value=4.3e-08 Score=102.04 Aligned_cols=145 Identities=16% Similarity=0.114 Sum_probs=112.1
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHH-HHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFM-GTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
.++.+++..++..+.++...++++.|+++ +|+++.+.+.+.++.. +...++.+++|+++||+ |||+.+.++.++.++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 36666667777788888889999999987 8999999998888766 56778999999999999 999999988888777
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
+..+..+..+... + .+ .+..+...+..+.++.+++.+...+...+++.+.+|++. |++.++
T Consensus 288 ~~~~~~~~~~~~~----------~-~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g 348 (356)
T TIGR00901 288 TNAGFVWLASNGH----------H-DG--ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQMA 348 (356)
T ss_pred HHHHHHHHHhcCc----------c-cc--cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHHHH
Confidence 6665544311000 0 00 001234556677788899999999999999999999999 999999
Q ss_pred hhhhhHH
Q 008182 185 RFFFFIS 191 (575)
Q Consensus 185 ~~~~~~~ 191 (575)
+++...+
T Consensus 349 ~~~~~~~ 355 (356)
T TIGR00901 349 LLSSLSA 355 (356)
T ss_pred HHHHHHh
Confidence 8877654
No 204
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.79 E-value=2.6e-06 Score=90.02 Aligned_cols=103 Identities=15% Similarity=0.110 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHH
Q 008182 67 VTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIAL 146 (575)
Q Consensus 67 ~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (575)
..+.+....+.+++++.+.|++ |.|..+.++...+..-.+...+ .|...++.+-
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~-------------------------~N~y~~yfss 109 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLF-------------------------PNSYYLYFSS 109 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHh-------------------------cchHHHHHHH
Confidence 6677888889999999999998 9999999998877765443332 2467788999
Q ss_pred HHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHH
Q 008182 147 YLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 201 (575)
Q Consensus 147 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~ 201 (575)
.+.|+|.+..+.....++++..+++. +.+..++.......+.++|..+.
T Consensus 110 allG~Gaallw~GqG~ylt~~st~~t------ie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 110 ALLGFGAALLWTGQGGYLTSNSTRET------IERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred HHhhhhHHheecccceehhhcCChhh------HHHHHHHHHHHHHHHHHhhhHhh
Confidence 99999999999999999999988888 77777776666666666664333
No 205
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.79 E-value=1.5e-08 Score=104.52 Aligned_cols=144 Identities=22% Similarity=0.192 Sum_probs=119.4
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCC-chhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 27 AALVLGIELCERLSTMGIAVNLVTYLVGTMHLP-SATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
+|..+...++..+.++....+++.|+.+++|++ ..+.+.+.++..+...++.++.|+++||+ |+|+...+......++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 286 (352)
T PF07690_consen 208 LWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILG 286 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHH
Confidence 444555666666677788899999999999999 79999999999999999999999999998 9988888877777776
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
.+.+.+.... .+....+...++.|++.+...+...+++.|.+|+++ |++..++
T Consensus 287 ~~~~~~~~~~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~ 339 (352)
T PF07690_consen 287 ALGLLLLPFS---------------------SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFGL 339 (352)
T ss_dssp HHHHCCSHHH---------------------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHHH
T ss_pred HHHHHHHHHh---------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHH
Confidence 6655544221 134556667778899999999999999999999888 9999999
Q ss_pred hhhhHHHhHHHHH
Q 008182 186 FFFFISLGTLMAV 198 (575)
Q Consensus 186 ~~~~~~ig~~l~~ 198 (575)
.+...++|..+||
T Consensus 340 ~~~~~~~~~~igP 352 (352)
T PF07690_consen 340 FNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC
Confidence 9999999999987
No 206
>PRK11043 putative transporter; Provisional
Probab=98.77 E-value=3.4e-07 Score=96.97 Aligned_cols=159 Identities=9% Similarity=-0.067 Sum_probs=111.2
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH
Q 008182 27 AALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGT 106 (575)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~ 106 (575)
.+...+...+....++....++|.|++ +.|++..+.+........+..++..+.+++.||+ |+|+.+.......+++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~ 282 (401)
T PRK11043 205 YLGNVLIFAACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSV 282 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHH
Confidence 333334444445556666677888876 5799999999888888888889999999999998 99998766666555554
Q ss_pred HHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhh
Q 008182 107 GMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRF 186 (575)
Q Consensus 107 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 186 (575)
+.+.+....+. .+....++...+.+++.+...+.......+..| ++ ++++.+++
T Consensus 283 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g~~ 336 (401)
T PRK11043 283 IAIWLASLLSH-------------------PSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QA------TGKAAALQ 336 (401)
T ss_pred HHHHHHHHhcc-------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-cc------ChHHHHHH
Confidence 43332211111 123344555667788888888887777777765 45 89999998
Q ss_pred hhhHHHhHHHHHHHHhhhcccccchhH
Q 008182 187 FFFISLGTLMAVTVLVYIQDEISRSVG 213 (575)
Q Consensus 187 ~~~~~ig~~l~~~i~~~l~~~~~~~~~ 213 (575)
+.....++..++.+.+.+.+.......
T Consensus 337 ~~~~~~~~~~~~~~~g~l~~~~~~~~~ 363 (401)
T PRK11043 337 NTLQLGLCFLASLLVSALISTPLLTTG 363 (401)
T ss_pred HHHHHHHHHHHHHHHHHccCCChhHHH
Confidence 888888888888888888775444433
No 207
>TIGR00898 2A0119 cation transport protein.
Probab=98.76 E-value=6.4e-08 Score=105.82 Aligned_cols=143 Identities=11% Similarity=-0.055 Sum_probs=102.6
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCc
Q 008182 55 TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQA 134 (575)
Q Consensus 55 ~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (575)
.++.+... ......+....+.++.++++||+ |||+++.++.++.+++.+++.+..+
T Consensus 352 ~~~~~~~~---~~~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~~-------------------- 407 (505)
T TIGR00898 352 NLGGNIYL---DLFISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVPV-------------------- 407 (505)
T ss_pred ccCCChHH---HHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcCC--------------------
Confidence 45555332 23344566678889999999998 9999999998888888777665521
Q ss_pred cchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHH
Q 008182 135 SGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGY 214 (575)
Q Consensus 135 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f 214 (575)
.......+..++.+++.+...+....+.+|.+|++. |++++++.+....+|++++|.+.+ +.+ .++..++
T Consensus 408 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~~~~~~ 477 (505)
T TIGR00898 408 --DLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-LGE-KWLFLPL 477 (505)
T ss_pred --CchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-HHH-HHHhhHH
Confidence 111233333445555666666778889999999988 999999999999999999999988 433 5667777
Q ss_pred HHHHHHHHHHHHHHHhc
Q 008182 215 GICSVAMFMAIIIFLAG 231 (575)
Q Consensus 215 ~~~~~~~~~~~~~~~~~ 231 (575)
++.++..+++.+..++.
T Consensus 478 ~~~~~~~~~~~~~~~~l 494 (505)
T TIGR00898 478 VLFGGLALLAGILTLFL 494 (505)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 77776666665554443
No 208
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.72 E-value=5e-07 Score=94.60 Aligned_cols=150 Identities=7% Similarity=-0.041 Sum_probs=98.2
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
..+..++..++...+.+....+.+.+..+.+|+++.+.+.+.....++..++.++.|+++||+ |||+++.++..+..+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 273 (377)
T PRK11102 195 RVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIM 273 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH
Confidence 344445555555555666666777888888999999999999999999999999999999999 9999999887765443
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
.+........+ .+.....++..+.+.+.+...+.....+.|..| +. +++..+.
T Consensus 274 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~ 326 (377)
T PRK11102 274 GIWLVVSALLD--------------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTASSL 326 (377)
T ss_pred HHHHHHHHHHh--------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHHHH
Confidence 32222211101 112333334444444445555555566677665 45 7788877
Q ss_pred hhhh-HHHhHHHHHHHHhh
Q 008182 186 FFFF-ISLGTLMAVTVLVY 203 (575)
Q Consensus 186 ~~~~-~~ig~~l~~~i~~~ 203 (575)
.... ..+|..+++++++.
T Consensus 327 ~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 327 AGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 5443 45677777766543
No 209
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.72 E-value=4.6e-07 Score=95.64 Aligned_cols=85 Identities=14% Similarity=0.023 Sum_probs=66.0
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH
Q 008182 27 AALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGT 106 (575)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~ 106 (575)
++...+...+............+.|+.+++|+++.+.+.+.....+...++.++.|++.||+ |||+.+.++.++..++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~ 283 (392)
T PRK10473 205 FLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAG 283 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 33333333333333344455567788888999999999999999999999999999999998 99999999988888887
Q ss_pred HHHHHH
Q 008182 107 GMLAMV 112 (575)
Q Consensus 107 ~l~~~~ 112 (575)
+++.+.
T Consensus 284 ~~~~~~ 289 (392)
T PRK10473 284 ITLALS 289 (392)
T ss_pred HHHHHH
Confidence 777665
No 210
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.69 E-value=3.6e-07 Score=91.64 Aligned_cols=173 Identities=14% Similarity=0.077 Sum_probs=116.1
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhc-----------------C--CCCchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGT-----------------M--HLPSATSANIVTDFMGTSFLLCLLGGFLAD 86 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-----------------l--~~~~~~~~~~~~~~~~~~~~~~~~~G~laD 86 (575)
.-+.+..+.|.+.++||+++-.-....+.. . ..+...--.=..+..+.-+-+.++.+++.|
T Consensus 327 ttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~ive 406 (528)
T KOG0253|consen 327 TTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVE 406 (528)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHH
Confidence 444566678889999998853322211111 0 111111112233456667788899999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccc
Q 008182 87 TFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTD 166 (575)
Q Consensus 87 r~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 166 (575)
|+ |||+++..+++++.+..+++..+.+ +. ....+++.+|+++..+. .+.+.+..|
T Consensus 407 rl-GRKkTMal~l~~f~iflfll~~c~~-rn-------------------~~tvllf~arafisg~f----qvaYvYtPE 461 (528)
T KOG0253|consen 407 RL-GRKKTMALSLILFGIFLFLLTTCKT-RN-------------------AYTVLLFTARAFISGAF----QVAYVYTPE 461 (528)
T ss_pred Hh-cchhHHHHHHHHHHHHHHHHHHhcC-cc-------------------hhHHHHHHHHHHHhchh----eEEEEecCc
Confidence 98 9999999999999998887766532 11 12456778888775544 455788899
Q ss_pred cCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhc
Q 008182 167 QFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 167 ~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
.+|... |+.+.|....+..+|+++.|.++ ...+ -.-..+..+.....+++.+..+++
T Consensus 462 VyPTav------RatgvGtcSsmaRIggI~~p~iA-~~~e-~s~sl~i~vy~~~~ilagIavcff 518 (528)
T KOG0253|consen 462 VYPTAV------RATGVGTCSSMARIGGIFSPVIA-MRAE-LSTSLPIFVYGALFILAGIAVCFF 518 (528)
T ss_pred ccchhh------hhcchhhhhhHHhhhhhhhhHHH-HHhc-cceeehHHHHHHHHHHHHHHheee
Confidence 999999 99999999999999999999888 3333 333344445555555555554444
No 211
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.67 E-value=1.3e-07 Score=101.48 Aligned_cols=178 Identities=16% Similarity=0.101 Sum_probs=121.1
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccc-------hHHHH-H
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLG-------RYKTI-A 96 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-------r~~~~-~ 96 (575)
+.+|.+.+..+++..+++.+..++|+|+.+.+|++..+.|++.++..+...+..+++|.++||..- +||.+ .
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 479999999999999999999999999999999999999999999999999999999999999833 11211 1
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhh
Q 008182 97 IFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEK 176 (575)
Q Consensus 97 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 176 (575)
++....++..+.+++. +. + ........+.++..+.|+..++. ..-..|. .++.
T Consensus 338 i~~~~~ai~l~~l~~~---~~--------------~-~~~~a~~~l~~~~~~~g~~~~Gf----~~~~~~~-apq~---- 390 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFT---SD--------------E-HRLLAVILLTIAIGLSGFNISGF----YKNHQDI-APQH---- 390 (466)
T ss_pred HHHHHHHHHHHeeeec---CC--------------C-cchHHHHHHHHHHHHcccchhhh----Hhhhhhc-cchH----
Confidence 2222222233333322 11 0 00011111111112222222221 1112222 2333
Q ss_pred hhhhhhhhhhhhhHHHhHHHHHHHHhhhccc---ccchhHHHHHHHHHHHHHHHHHhc
Q 008182 177 TQMAYFFSRFFFFISLGTLMAVTVLVYIQDE---ISRSVGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 177 ~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~---~~~~~~f~~~~~~~~~~~~~~~~~ 231 (575)
-+..+++.+...++.+.++|.+.+.+.+. ..|+.+|++.+++.+++-+.+.+.
T Consensus 391 --a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 391 --AGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 68889999999999999999999999842 369999999998888877666555
No 212
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.63 E-value=1.1e-06 Score=93.68 Aligned_cols=189 Identities=12% Similarity=0.077 Sum_probs=134.8
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
.+.....+.+.++..++.-.......+.+-++-|++..++-+++........+..+.+.++.||+ |||+.++++..++.
T Consensus 268 R~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~ 346 (485)
T KOG0569|consen 268 RRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMA 346 (485)
T ss_pred hHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHH
Confidence 34566677777777776655566667777778899999999999999999999999999999999 99999999999998
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccc-cccchhccccccCCCCChHhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGG-LKSSVSGFGTDQFDEKDEKEKTQMAYF 182 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~r~~~ 182 (575)
+..+++.......... +..-....+++.++..+..+. ..|...-+.+|.+|++. |..+
T Consensus 347 ~~~~~~~~~~~l~~~~---------------~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R~aa 405 (485)
T KOG0569|consen 347 VALLLMSIALFLSNSF---------------GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------RSAA 405 (485)
T ss_pred HHHHHHHHHHHHHHHh---------------hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------hHHH
Confidence 8887776654332200 000001123444443333332 35677778899999999 9999
Q ss_pred hhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccc
Q 008182 183 FSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRY 235 (575)
Q Consensus 183 ~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 235 (575)
+++......+..++....-..+.+..|- ..|.+..+..++..+..++..|+.
T Consensus 406 ~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 406 QSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 9998888888888887777888887775 555555555555555555544433
No 213
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.63 E-value=3.5e-07 Score=99.26 Aligned_cols=165 Identities=15% Similarity=0.064 Sum_probs=117.2
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.++.+++..++.....+......+.|.+..++ +....+.+.+...+...++.++.++++||+ |||++++++..+..+
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 566777777777777776666666555554444 556666777777788889999999999999 999999988877676
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhh-hhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEK-TQMAYFF 183 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~ 183 (575)
+.+........+. .+...+++..++.+++.+...+...++++|..+..+.+.. ...+..+
T Consensus 309 ~~~~~~~~~~~~~-------------------~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~ 369 (473)
T PRK10429 309 SCGVLLLMGLAAP-------------------HNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAY 369 (473)
T ss_pred HHHHHHHHhccCc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHH
Confidence 6555433210011 2345566666778889898888889999999774431100 0135577
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccc
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISR 210 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~ 210 (575)
+...+...+|..+++.+.|++.+..||
T Consensus 370 s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 370 SVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 888889999999999999998776655
No 214
>PRK09669 putative symporter YagG; Provisional
Probab=98.63 E-value=3.3e-07 Score=98.59 Aligned_cols=162 Identities=11% Similarity=0.079 Sum_probs=108.5
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.++.++...++............+.|.+..++ ++...+.+.....+...++.+++++++||+ |+|+.+.++.++.++
T Consensus 229 ~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 306 (444)
T PRK09669 229 SQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVI 306 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHH
Confidence 345555555555544443333333334443343 333444555566677778889999999998 999999988776665
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhh-hhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEK-TQMAYFF 183 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~ 183 (575)
+.....+. +. ++...+++..++.+++.+...+...++++|..+.++.+.. ...+..+
T Consensus 307 ~~~~~~~~---~~-------------------~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~ 364 (444)
T PRK09669 307 LSALIFFI---PP-------------------SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVF 364 (444)
T ss_pred HHHHHHHh---Cc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHH
Confidence 43333222 11 2355667777889999999999999999999875442211 1135667
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccc
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISR 210 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~ 210 (575)
+.+.++..+|.++|+.++|++.+..|+
T Consensus 365 s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 365 STNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 888889999999999999998776666
No 215
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.59 E-value=1.1e-06 Score=92.82 Aligned_cols=180 Identities=11% Similarity=0.059 Sum_probs=134.7
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
.+...++..++...+.-....+...|+++.-|.+....+.+.++-.+.-.+.-...+++..|+ |.|++++++.+..++=
T Consensus 208 ~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR 286 (400)
T PF03825_consen 208 RFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVR 286 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 455555666666666667788899999865447888888877777777778888999999998 9999999999988887
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
..+.+..++ |. ........++..+.|+..+....+...++.+..|++. |+++.++
T Consensus 287 ~~l~a~~~~-~~------------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l 341 (400)
T PF03825_consen 287 WLLYAYFSD-PW------------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQGL 341 (400)
T ss_pred HHHHHHhcC-Cc------------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHHH
Confidence 777776521 11 0012223444567899999999999999999999999 9999999
Q ss_pred hhhh-HHHhHHHHHHHHhhhcccccch------hHHHHHHHHHHHHHHHHHhc
Q 008182 186 FFFF-ISLGTLMAVTVLVYIQDEISRS------VGYGICSVAMFMAIIIFLAG 231 (575)
Q Consensus 186 ~~~~-~~ig~~l~~~i~~~l~~~~~~~------~~f~~~~~~~~~~~~~~~~~ 231 (575)
+... ..+|..+|..++|++.+.+|-+ ..+.++++..++..+++++.
T Consensus 342 ~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 342 YSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 7764 6899999999999999887644 44455555555554444443
No 216
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.58 E-value=7.7e-07 Score=94.73 Aligned_cols=162 Identities=10% Similarity=-0.002 Sum_probs=114.3
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHhhhcC-CCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 27 AALVLGIELCERLSTMGIAVNLVTYLVGTM-HLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
++..++..++-.....+..++++.|+.+.. +.+....+...+.+.....++++++|+++||+ ++||++.++.+...+.
T Consensus 234 ~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~ 312 (410)
T TIGR00885 234 YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMAL 312 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 444444555544444466788999987532 44555556667777788899999999999998 9999998888877777
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
.++..+... .. .....++.++..+.+.|...++..+..+++. ......+
T Consensus 313 ~ll~~~~~~------------------------~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~------~~~s~~l 361 (410)
T TIGR00885 313 CLGSIFAGG------------------------HV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDT------KYGAAGL 361 (410)
T ss_pred HHHHHHcCC------------------------hH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhhHHHH
Confidence 666655411 11 2455667788888888999999999887655 3222222
Q ss_pred hhhhHHHhHHHHHHHHhhhcccc------cchhHHHHHHHHHH
Q 008182 186 FFFFISLGTLMAVTVLVYIQDEI------SRSVGYGICSVAMF 222 (575)
Q Consensus 186 ~~~~~~ig~~l~~~i~~~l~~~~------~~~~~f~~~~~~~~ 222 (575)
.+ ..+|+.+.|.+.|++.|.. +.+..|+++.+..+
T Consensus 362 -~~-~~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 362 -VM-AIIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred -HH-HHhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 22 2399999999999999953 47888887665443
No 217
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.58 E-value=3.1e-07 Score=95.60 Aligned_cols=141 Identities=12% Similarity=0.075 Sum_probs=104.5
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
.++...+..++.....+.+..+++.|+++.+|+++.+.+.+.....+...++.+++|+++||+ |||+.+..+.....++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 304 (366)
T TIGR00886 226 HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMG 304 (366)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHH
Confidence 455566666666666778888999999999999999999999999999999999999999998 9999888887776666
Q ss_pred HHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhh
Q 008182 106 TGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 185 (575)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 185 (575)
..++.+....+ .+...+.+...+.+++.|...+...+++++.+| ++ +++..|+
T Consensus 305 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~------~g~~~g~ 357 (366)
T TIGR00886 305 AFLVVLGLVSP--------------------LSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RA------TGAVSGL 357 (366)
T ss_pred HHHHHhcCCCc--------------------chHHHHHHHHHHHHHHhccccchhhhcchhhch-hh------cccHHHH
Confidence 66555431100 024444444555555556556666777888776 45 8999999
Q ss_pred hhhhHHHhH
Q 008182 186 FFFFISLGT 194 (575)
Q Consensus 186 ~~~~~~ig~ 194 (575)
.+...++|+
T Consensus 358 ~~~~~~~g~ 366 (366)
T TIGR00886 358 VGAIGNLGG 366 (366)
T ss_pred HHHhccCCC
Confidence 888777763
No 218
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.50 E-value=1.7e-06 Score=90.43 Aligned_cols=179 Identities=13% Similarity=0.082 Sum_probs=139.5
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCC---CCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMH---LPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAA 100 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~ 100 (575)
-|.+|.+.+........|+..-...+.|.+..++ .++...|.+.+.-.+.-++.-.++.++-+|+ |.|+.++++..
T Consensus 219 ~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~ 297 (412)
T PF01306_consen 219 MRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGV 297 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHH
Confidence 3567766665555555555555668888876443 4455677778888888888889999999998 99999999999
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhh
Q 008182 101 VQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA 180 (575)
Q Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 180 (575)
++++=...++++++ .+.+.+.+.+.++-.+....+..-++++.+|++- .+
T Consensus 298 i~~iRi~~~~~~~~------------------------~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------sA 347 (412)
T PF01306_consen 298 IMAIRIIGSGFATN------------------------PWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------SA 347 (412)
T ss_dssp HHHHHHHHHHT--S------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------HH
T ss_pred HHHHHHHHHhhhcc------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------HH
Confidence 98888888888743 6678899999999999988999999999999887 77
Q ss_pred hhhhh-hhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 181 YFFSR-FFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 181 ~~~~~-~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
+...+ ++.+..+|..+.+.++|++.|..|++..|++.+.+.+...++..+..+
T Consensus 348 t~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 348 TLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeec
Confidence 77777 567889999999999999999999999998877776666666555544
No 219
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.49 E-value=4.8e-06 Score=87.95 Aligned_cols=142 Identities=11% Similarity=-0.001 Sum_probs=98.9
Q ss_pred HHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCC
Q 008182 41 TMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRP 120 (575)
Q Consensus 41 ~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 120 (575)
........+.|+++.+|+++.+.+++......+..++.++.+++.||+ ||+... ......++.+..........
T Consensus 223 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~--- 296 (394)
T PRK11652 223 IAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPGWFGV--- 296 (394)
T ss_pred HHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHhcc---
Confidence 333345567788888999999999988888888888899999999998 733322 22222222222111100000
Q ss_pred CCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHH
Q 008182 121 RPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTV 200 (575)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i 200 (575)
.+...+.+...+.++|.+...|...+...|.+| ++ ++...++.+...++|+.+++.+
T Consensus 297 ----------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~~lg~~~~~~~ 353 (394)
T PRK11652 297 ----------------MNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YL------AGTAGALLGGLQNIGSGLAALL 353 (394)
T ss_pred ----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cc------chHHHHHHHHHHHHHHHHHHHH
Confidence 124456667788888888888999988888886 35 7888889888889999999999
Q ss_pred Hhhhcccccch
Q 008182 201 LVYIQDEISRS 211 (575)
Q Consensus 201 ~~~l~~~~~~~ 211 (575)
++++.+...+.
T Consensus 354 ~~~~~~~~~~~ 364 (394)
T PRK11652 354 SAMLPQTGQFS 364 (394)
T ss_pred HHHccCCchHH
Confidence 99887654444
No 220
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.44 E-value=1.9e-06 Score=82.72 Aligned_cols=154 Identities=18% Similarity=0.226 Sum_probs=94.3
Q ss_pred HHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCc
Q 008182 47 NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKET 126 (575)
Q Consensus 47 ~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 126 (575)
....|+.+.+|+...+.+.+.-+-.....+...+.|-++||- ||||.-+.-.+.+.+ +.+.--
T Consensus 58 PYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtycitYiL----sCiTKh------------ 120 (454)
T KOG4332|consen 58 PYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCITYIL----SCITKH------------ 120 (454)
T ss_pred ceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehHHHHH----HHHhhc------------
Confidence 334577788999999999998888888899999999999998 999976555444443 332211
Q ss_pred CcccccCccchhhHHHHHHHHHHHHcccccccchhc-cccccCCCCChHhhhhhhhhhhh-hhhhHHHhHHHHHHHHhhh
Q 008182 127 ATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSG-FGTDQFDEKDEKEKTQMAYFFSR-FFFFISLGTLMAVTVLVYI 204 (575)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~ig~~l~~~i~~~l 204 (575)
..++-.++++|++-|+..+....+..+ +++|...++.-. ++=...-++- ....+.+-.+++.+.+..+
T Consensus 121 ---------SpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~Fe-qqWls~TFskA~ffgNglvAiiaGlfgn~l 190 (454)
T KOG4332|consen 121 ---------SPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFE-QQWLSVTFSKAVFFGNGLVAIIAGLFGNLL 190 (454)
T ss_pred ---------CCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCCh-HhhhhHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 124667899999999999987777665 445654333211 0001111111 1122333344444445555
Q ss_pred cccc--cchhHHHHHHHHHHHHHHH
Q 008182 205 QDEI--SRSVGYGICSVAMFMAIII 227 (575)
Q Consensus 205 ~~~~--~~~~~f~~~~~~~~~~~~~ 227 (575)
.+++ |.-.+|-.++....++..+
T Consensus 191 vd~~slGPVAPFdAAacfLaigmAv 215 (454)
T KOG4332|consen 191 VDTFSLGPVAPFDAAACFLAIGMAV 215 (454)
T ss_pred HHHhccCCCCchHHHHHHHHHHHHH
Confidence 5554 4667776555444444333
No 221
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.41 E-value=7.7e-06 Score=84.28 Aligned_cols=173 Identities=16% Similarity=0.189 Sum_probs=139.5
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHH
Q 008182 30 VLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGML 109 (575)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~ 109 (575)
.+..-+...++++.=-..+-+|--+.+|++..|...+......+..++-...|++..|..+++++..+++...+++..+.
T Consensus 213 f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~li 292 (403)
T PF03209_consen 213 FFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALI 292 (403)
T ss_pred HHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHH
Confidence 33334445555554456788899999999999999999999999999999999998865599999999999999988877
Q ss_pred HHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhh
Q 008182 110 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF 189 (575)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 189 (575)
.++... .+.+.+..+.+++|+|+|.+....-+.+-|+.++++ .+..+|.+..+
T Consensus 293 i~a~~~---------------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaa 345 (403)
T PF03209_consen 293 ILAGPL---------------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAA 345 (403)
T ss_pred HHHHhc---------------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHH
Confidence 777432 237788999999999999998888888999988887 88999999999
Q ss_pred HHHhHHHHHHHHhhhccc----------ccchhHHHHHHHHHHHHHHHHH
Q 008182 190 ISLGTLMAVTVLVYIQDE----------ISRSVGYGICSVAMFMAIIIFL 229 (575)
Q Consensus 190 ~~ig~~l~~~i~~~l~~~----------~~~~~~f~~~~~~~~~~~~~~~ 229 (575)
..+...++..++|.+.|. .+|..+|.+-++..++++.+..
T Consensus 346 QA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 346 QAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888887552 3477778777777666665543
No 222
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.41 E-value=2.7e-07 Score=95.53 Aligned_cols=143 Identities=17% Similarity=0.227 Sum_probs=114.9
Q ss_pred ccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccce
Q 008182 365 AGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVS 444 (575)
Q Consensus 365 ~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (575)
.+.++....+...++.|+.+++.++..|++- +.+|..+..++.+..++. ..
T Consensus 70 ~Gll~~vf~v~~~i~sPl~gyLadryNR~~v----------~~vG~~iW~~Av~~~~fs-------------------~~ 120 (493)
T KOG1330|consen 70 LGLLQTVFIVVFMIASPLFGYLADRYNRKRV----------IAVGIFIWTLAVFASGFS-------------------NH 120 (493)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhcCcceE----------EeeHHHHHHHHHHHHHHH-------------------HH
Confidence 3556777888888999999999776666533 788999999998888775 23
Q ss_pred ehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCccc
Q 008182 445 VFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRG 524 (575)
Q Consensus 445 ~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~ 524 (575)
.+.+++.-.+.|+||+...|...+++++.+|...|++..+++++...+|..+|-...+.+.++.. .|
T Consensus 121 Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~-----~W-------- 187 (493)
T KOG1330|consen 121 FWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF-----WW-------- 187 (493)
T ss_pred HHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc-----ce--------
Confidence 34567788999999999999999999999999999999999999999999998777666543322 24
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhhhc
Q 008182 525 RLDLFYGLLAILSIINLVIYLICAVWY 551 (575)
Q Consensus 525 ~~~~~f~~~a~l~~v~~~~~~~~~~~~ 551 (575)
++-|++.++++++..++..++.++-
T Consensus 188 --r~af~~~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 188 --RWAFRGSAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred --EEEEEeehHHHHHHHHHHHhhccCc
Confidence 5567888999988888777776653
No 223
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.38 E-value=4e-06 Score=90.96 Aligned_cols=186 Identities=7% Similarity=-0.053 Sum_probs=129.7
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCch----hhHHHHHHHHHHHHHHHHHHH----HHhhcccchHHHH--H
Q 008182 27 AALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSA----TSANIVTDFMGTSFLLCLLGG----FLADTFLGRYKTI--A 96 (575)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~G----~laDr~~Gr~~~~--~ 96 (575)
+..+++...+....+.-..+.++.|..++.+.+.. ..+++.+.-.+...+.+++.. ++.||..+.+... .
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 33334444444555555566688888776554432 256777777777777776655 4455421333433 6
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhh
Q 008182 97 IFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEK 176 (575)
Q Consensus 97 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 176 (575)
+|.++.+++.+.++++... .+.+...+.+++.+..++.++|+....|...+++++..|++.
T Consensus 354 ~G~~l~~~~~~~~~~~~~~---------------~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~---- 414 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWF---------------ADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL---- 414 (475)
T ss_pred HHHHHHHHHHHHHHHHHhh---------------cCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH----
Confidence 7888888887777654110 011122467888999999999999999999999999999998
Q ss_pred hhhhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 177 TQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 177 ~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
|++.++++.....+|..+++.+.....+..+|...|...++..++..++.++..|
T Consensus 415 --~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 415 --MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988888777678888887777766666555555444
No 224
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.37 E-value=9.3e-06 Score=86.54 Aligned_cols=174 Identities=10% Similarity=0.019 Sum_probs=114.1
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.++...+..++....++.....+|.|+++.+|+++.+.++.......+..++..+.+.+.++. +++|.+.....+..+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHH
Confidence 3466666666667777777778889999999999999999988888888888888888876555 455554444444445
Q ss_pred HHHHHHHHhh-hcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 105 GTGMLAMVTK-LRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 105 ~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
+.+++..... .+ .+....+++.++.++|.+...|......- .+.+.+ ++++.
T Consensus 297 g~~l~~~~~~~~~--------------------~~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~~~~-----~G~a~ 349 (413)
T PRK15403 297 GLALLIVGNLLWP--------------------HVWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSNNLP-----KGTVS 349 (413)
T ss_pred HHHHHHHHHHHcc--------------------ccHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccCCCC-----CcHHH
Confidence 5444433210 01 12333566777888888888777774322 222211 67777
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHH
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIII 227 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~ 227 (575)
+..+.....+..+++.+++++.+. +-..+|....+...+.+..
T Consensus 350 a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 392 (413)
T PRK15403 350 ASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVIVVF 392 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHHH
Confidence 777777778888888888888664 5566666655554444333
No 225
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.37 E-value=4.1e-06 Score=88.59 Aligned_cols=162 Identities=19% Similarity=0.156 Sum_probs=128.5
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.+...++..++...++....+....|.+-.+|.++.+..........+..++.++..++++|+ |+|+++.++.++.++
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i 314 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAV 314 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHH
Confidence 4566666667777776666667778888888999999998888888888888899999999999 999999999999999
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhh-hhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKT-QMAYFF 183 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~-~r~~~~ 183 (575)
+.++..+.. . ++..+.++..++.++|.+...+...++++|..+..+-+... .-|..+
T Consensus 315 ~~~~~~f~~---~-------------------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~ 372 (467)
T COG2211 315 GYLLLYFTP---A-------------------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVY 372 (467)
T ss_pred HHHHHHhhc---C-------------------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHH
Confidence 999888873 1 35778888889999999999999999999988755432211 125555
Q ss_pred hhhhhhHHHhHHHHHHHHhhhccccc
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEIS 209 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~ 209 (575)
+.+....-+|.+++..+.|++....|
T Consensus 373 s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 373 SGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 66777778888888888877755444
No 226
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.35 E-value=1.3e-05 Score=78.57 Aligned_cols=155 Identities=15% Similarity=0.214 Sum_probs=106.0
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
|-.+...+.+..+.. ..|.. ....+.+++++|+|.+|.+.+...-.++..+ .++.|.+.|++ |++.++.+|.+...
T Consensus 2 W~~l~a~~~v~~~~G-t~Y~F-s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~-gp~~~l~iG~~~~~ 77 (250)
T PF06813_consen 2 WLSLVASIWVQLCSG-TTYTF-SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRF-GPWVVLLIGAVLGF 77 (250)
T ss_pred hhhHHHHHHHHHhcC-cccch-hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhc-chHHHHHHHHHHHH
Confidence 333333344444433 23322 4566778999999999999999999999886 58889999999 99999999999999
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
+|..++.++-+-. ......+.+.+...+.+.+.+....+...-..+.||+ + ||++.
T Consensus 78 ~GY~~~~l~~~~~-----------------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------RG~vv 133 (250)
T PF06813_consen 78 VGYGLLWLAVSGR-----------------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------RGTVV 133 (250)
T ss_pred HHHHHHHHHHhCc-----------------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------cCcee
Confidence 9999888874311 1112345555555566566554444443444578874 6 99999
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcc
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQD 206 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~ 206 (575)
++.-....+++.+-..+-..+.+
T Consensus 134 gilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 134 GILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred hhhhHHHHhHHHHHHHHHHHHcC
Confidence 99777777777765555544433
No 227
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.33 E-value=1.1e-05 Score=70.83 Aligned_cols=133 Identities=23% Similarity=0.329 Sum_probs=92.7
Q ss_pred cchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhH
Q 008182 370 VFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLI 449 (575)
Q Consensus 370 ~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 449 (575)
....+...+..++.+++.++..+| +.+..+..+..++.+..... .+.+...
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~----------~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~ 55 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRK----------PVLLVGLFIFVLSTAMFALS-------------------SNITVLI 55 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchh----------HHHHHHHHHHHHHHHHHHHh-------------------ccHHHHH
Confidence 344556666677777765544333 23555666666665554432 2334556
Q ss_pred HHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcccchhHH
Q 008182 450 PQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLF 529 (575)
Q Consensus 450 ~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~ 529 (575)
...++.+++.....+....++.+..|++.|++++++.+....+|..+++.+.+.+.+.. +| ...
T Consensus 56 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~----------~~~ 119 (141)
T TIGR00880 56 IARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL------GW----------RAP 119 (141)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc------ch----------HHH
Confidence 67888899999999999999999999999999999999999999999999998775321 12 455
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 008182 530 YGLLAILSIINLVIYLIC 547 (575)
Q Consensus 530 f~~~a~l~~v~~~~~~~~ 547 (575)
|++.+.+.++..+..+..
T Consensus 120 ~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 120 FLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 666666666665555443
No 228
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.26 E-value=0.0025 Score=67.68 Aligned_cols=190 Identities=10% Similarity=-0.040 Sum_probs=106.9
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|..+.+....++.+.+--+...-.+.|+.+-+.-+.-..+..-..-.+...+..+..|.+.||. .|.+++..++++.-+
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~ 80 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNL 80 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHH
Confidence 4566777888888888888878888888876554555555555556777788889999999998 999998888776554
Q ss_pred HHHHHHHH----hhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhh
Q 008182 105 GTGMLAMV----TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA 180 (575)
Q Consensus 105 ~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 180 (575)
...+.+.. -..+.. . .+........+.+..++-++..=.......+.=-|+...=..++...+.
T Consensus 81 sv~~s~~~~~~l~~~~~~-----------~-~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La 148 (432)
T PF06963_consen 81 SVAASCALFLLLLSYPSS-----------S-SQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALA 148 (432)
T ss_pred HHHHHHHHHHHHHhCCcc-----------c-cccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHH
Confidence 43222211 111110 0 0001111222222222222222222222233345553211111111144
Q ss_pred hhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHH
Q 008182 181 YFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIII 227 (575)
Q Consensus 181 ~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~ 227 (575)
+..+...=.=-+.-.++|++.|.+....+......+.++..++++.+
T Consensus 149 ~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 149 RMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 44444333335677889999999988888877766666666655554
No 229
>PRK11462 putative transporter; Provisional
Probab=98.23 E-value=3.3e-05 Score=83.57 Aligned_cols=162 Identities=10% Similarity=0.028 Sum_probs=97.6
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.+..++...++..+...........|.+..+|. ....+.+...+.++..++.+++++++||+ |+|+.+..+..+..+
T Consensus 228 k~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~ 305 (460)
T PRK11462 228 DQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAV 305 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHH
Confidence 3444555455555555444444444444444443 34455677778888889999999999998 999887755554444
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhh-hhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQ-MAYFF 183 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~-r~~~~ 183 (575)
..++..+. |. .+...+++..++.+++.+...+...++++|..+.++-+.... -+..+
T Consensus 306 ~~~~~~~~---~~-------------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~ 363 (460)
T PRK11462 306 ISLAMFFV---PM-------------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISF 363 (460)
T ss_pred HHHHHHHh---ch-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHH
Confidence 33333222 11 112233444455677777666667788888876432111110 24445
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccc
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISR 210 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~ 210 (575)
+...++..+|..+++.++|++.+..||
T Consensus 364 a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 364 AGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 666678889999999888887665454
No 230
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.22 E-value=2.5e-05 Score=77.57 Aligned_cols=148 Identities=22% Similarity=0.261 Sum_probs=110.8
Q ss_pred hHHHHHHHhhhcCCCCc--hhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 008182 44 IAVNLVTYLVGTMHLPS--ATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPR 121 (575)
Q Consensus 44 ~~~~l~~yl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 121 (575)
.....+.+.. +++.+. .+.++..+.+.+...++.++.|.++||+ |||+.+..+.....++.+++.+..+
T Consensus 21 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~------- 91 (338)
T COG0477 21 LSPALPLLLS-TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN------- 91 (338)
T ss_pred HHHHHHHHHH-HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc-------
Confidence 3344444444 444444 5788999999999999999999999999 9998888888765566555555422
Q ss_pred CCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCC-CChHhhhhhhhhhhhhhh-hHHHhHHHHHH
Q 008182 122 PCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDE-KDEKEKTQMAYFFSRFFF-FISLGTLMAVT 199 (575)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~-~~~ig~~l~~~ 199 (575)
.....+++.|.+.|++.+...+...+++.|.+++ +. |+...+.... ...+|..+++.
T Consensus 92 ---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 150 (338)
T COG0477 92 ---------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE------RGLAVGLVTLGAGALGLALGPL 150 (338)
T ss_pred ---------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 2367788889889999998899999999999887 34 8888888777 57788888887
Q ss_pred HHhhhccc--ccchhHHHHHHHHH
Q 008182 200 VLVYIQDE--ISRSVGYGICSVAM 221 (575)
Q Consensus 200 i~~~l~~~--~~~~~~f~~~~~~~ 221 (575)
+++.+... .+|+..|.+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 151 LAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHH
Confidence 77776553 56888665554443
No 231
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.21 E-value=0.00035 Score=72.93 Aligned_cols=156 Identities=14% Similarity=0.064 Sum_probs=108.0
Q ss_pred HHHHHHHhhhc-CCCCchhhHHHHH-HHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 008182 45 AVNLVTYLVGT-MHLPSATSANIVT-DFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRP 122 (575)
Q Consensus 45 ~~~l~~yl~~~-l~~~~~~~~~~~~-~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 122 (575)
-+++.+|+++. .|++..|...-+. +..-.+...-++...+.|.+ |.|++++++.+...+...++.+..+
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~~s-------- 93 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFGTS-------- 93 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHCc--------
Confidence 46789999997 9999998874333 33445556678889999998 9999999998887777777777643
Q ss_pred CCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHh
Q 008182 123 CKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 202 (575)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~ 202 (575)
...+-+..++-|++.+. ..+..+++=...|+++ --++.+....+.-+|..++..++-
T Consensus 94 ----------------v~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~~lgQ 150 (412)
T PF01770_consen 94 ----------------VLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISSLLGQ 150 (412)
T ss_pred ----------------HHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566777777777665 3445555555555544 455566666777777777777766
Q ss_pred hhcc--cccchhHHHHHHHHHHHHHHHHHhcC
Q 008182 203 YIQD--EISRSVGYGICSVAMFMAIIIFLAGT 232 (575)
Q Consensus 203 ~l~~--~~~~~~~f~~~~~~~~~~~~~~~~~~ 232 (575)
.+.. ..++...+++......++++..++++
T Consensus 151 llvs~~~~sy~~L~~isl~~~~~a~~~~~fLP 182 (412)
T PF01770_consen 151 LLVSFGGVSYFQLNYISLASVSLALLIALFLP 182 (412)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6554 33467777777766666666655543
No 232
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.20 E-value=3.4e-05 Score=79.04 Aligned_cols=139 Identities=19% Similarity=0.182 Sum_probs=108.8
Q ss_pred hhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 008182 43 GIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRP 122 (575)
Q Consensus 43 ~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 122 (575)
....+++.|+.+..|++..+++..++.+..+.++++.++-++-.|+ ...|.+.+..+...+-++..++..+
T Consensus 254 a~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~~~~~l~~g-------- 324 (422)
T COG0738 254 AIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLLLAVALIGG-------- 324 (422)
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHhcC--------
Confidence 3457899999998999999999999999999999999999998898 8888777766555544444444421
Q ss_pred CCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHh
Q 008182 123 CKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 202 (575)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~ 202 (575)
..-+.+.++.|+.++.+.|...++..+..+++. +.-|..-....+|+++.|.+.|
T Consensus 325 -----------------~v~~~~l~~ig~F~simfPTIfslal~~l~~~t--------s~~s~~l~maivGGAiiP~l~G 379 (422)
T COG0738 325 -----------------VVALYALFLIGLFNSIMFPTIFSLALKNLGEHT--------SVGSGLLVMAIVGGAIIPPLQG 379 (422)
T ss_pred -----------------hHHHHHHHHHHHHhHHHHHHHHHHHHhccCccc--------cccceeeeeheecchHHHHHHH
Confidence 223455678899999999999999999998443 3333334456789999999999
Q ss_pred hhcccccchhHHH
Q 008182 203 YIQDEISRSVGYG 215 (575)
Q Consensus 203 ~l~~~~~~~~~f~ 215 (575)
++.|..+-...+.
T Consensus 380 ~i~d~~g~~~~~~ 392 (422)
T COG0738 380 VIADMFGIQLTFL 392 (422)
T ss_pred HHHHhhhhHHHHH
Confidence 9999998777766
No 233
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.18 E-value=2.3e-05 Score=87.95 Aligned_cols=133 Identities=11% Similarity=0.096 Sum_probs=93.6
Q ss_pred ccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------
Q 008182 365 AGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAV---------- 434 (575)
Q Consensus 365 ~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------- 434 (575)
.+.+.+...+...+..+++.++.++..|| +.+.+|.++++++.+++++.+...... .++
T Consensus 70 ~G~i~s~~~i~~~~~~i~v~~~~~r~~r~----------~~i~~g~ll~~lg~ll~alphf~~~~y-~~~~~~~~~~~~~ 138 (633)
T TIGR00805 70 SGLINGSYEIGNLLLIIFVSYFGTKLHRP----------IVIGIGCAIMGLGSFLLSLPHFLSGRY-SYSTTVSSTGNLS 138 (633)
T ss_pred ceeeeehhhHHHHHHHHHHHHhhcccCcc----------eEEEecHHHHHHHHHHHhChHHhcCCc-ccccccccccccc
Confidence 34566667777777777777775544333 236778888888888877653211000 000
Q ss_pred ---------C-C-C----------CCCc--cceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHH
Q 008182 435 ---------G-L-T----------TATL--PVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLS 491 (575)
Q Consensus 435 ---------~-~-~----------~~~~--~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ 491 (575)
. . + .... ...+..+++.-++.|+|++...+....++.|.+|++.|+.+.|+++....
T Consensus 139 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~ 218 (633)
T TIGR00805 139 SANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAV 218 (633)
T ss_pred ccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHH
Confidence 0 0 0 0000 11344567789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhc
Q 008182 492 LGFFVSSFLVAVVKKVT 508 (575)
Q Consensus 492 lg~~lg~~l~~~v~~~~ 508 (575)
+|..+|+.+.+.+.+..
T Consensus 219 iG~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 219 FGPAFGYLLGSFCLQIY 235 (633)
T ss_pred hhhHHHHHHHHHHHhcc
Confidence 99999999999877544
No 234
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.14 E-value=3.1e-05 Score=83.30 Aligned_cols=208 Identities=8% Similarity=-0.063 Sum_probs=144.7
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhc-CCCCch-----h-----hHHHHHHHHHHHHHHHHHHHHHhhc
Q 008182 19 SKTGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGT-MHLPSA-----T-----SANIVTDFMGTSFLLCLLGGFLADT 87 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-l~~~~~-----~-----~~~~~~~~~~~~~~~~~~~G~laDr 87 (575)
..+..+|..+.++.++++..++++.+..+.+.|+.++ ++-++. + ..+....+.+...+.+++.-++.+|
T Consensus 252 ~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~ 331 (477)
T TIGR01301 252 AFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRG 331 (477)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456678999999999999999999999999998853 332221 1 2244445555556777778888999
Q ss_pred ccch-HHHHHHHHHHHHHHHHHHHHHhhhcc-cCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhcccc
Q 008182 88 FLGR-YKTIAIFAAVQTLGTGMLAMVTKLRQ-LRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGT 165 (575)
Q Consensus 88 ~~Gr-~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 165 (575)
+ |+ |++..++.++.+++.....+.++.++ .. +.++..++. .|........++...+.|+..+.......++++
T Consensus 332 ~-g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~--~~~~~~~~~--~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s 406 (477)
T TIGR01301 332 W-GAGKRLWGIVNIILAICLAATVLVTYVAKNSR--YYDGDGESL--PPPTGIKASALIVFAILGIPLAITYSIPFALAS 406 (477)
T ss_pred h-ccchhHHHHHHHHHHHHHHHHHHHHhhhhccc--ccccccccc--CcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHH
Confidence 8 95 77779998888888887776543211 00 000000000 111122355556667789999999999999999
Q ss_pred ccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhccccc--chhHHHHHHHHHHHHHHHHHhcCccc
Q 008182 166 DQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEIS--RSVGYGICSVAMFMAIIIFLAGTKRY 235 (575)
Q Consensus 166 ~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~--~~~~f~~~~~~~~~~~~~~~~~~~~~ 235 (575)
+..+++.++ .|..+|+.+.++-+...+..+..|.+.+..| -.+.+.+.++.++++.+..++..|+.
T Consensus 407 ~~~~~~~~~----~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~ 474 (477)
T TIGR01301 407 IRSSNLGAG----QGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRP 474 (477)
T ss_pred HHccccCCC----CcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999865422 6999999999999999999988888655554 56677888888888877777666643
No 235
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.13 E-value=0.0017 Score=67.86 Aligned_cols=61 Identities=18% Similarity=0.259 Sum_probs=50.2
Q ss_pred eehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008182 444 SVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVV 504 (575)
Q Consensus 444 ~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v 504 (575)
+.+.+++..+..|+..+..+...+..+.+..|++.|..++|+....-++|..+++.+.-.+
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3445556677778888999988888889999999999999999999999988887776543
No 236
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.09 E-value=1e-05 Score=82.39 Aligned_cols=142 Identities=22% Similarity=0.228 Sum_probs=115.7
Q ss_pred ccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccce
Q 008182 365 AGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVS 444 (575)
Q Consensus 365 ~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (575)
.+.+...-.+..++..|+.+.+.+++..|. -+.+|++++..+.+++++.. +
T Consensus 108 iG~LFaskA~~qllvnp~~G~l~~~iGy~i----------pm~~Gl~vmf~sTilFafg~-------------------s 158 (464)
T KOG3764|consen 108 IGLLFASKALVQLLVNPFFGNLIDRIGYKI----------PMVAGLFVMFLSTILFAFGN-------------------S 158 (464)
T ss_pred hhHHHHHHHHHHHHhcccchhhHHHhcccc----------HHHHHHHHHHHHHHHHHHcc-------------------h
Confidence 345556667777777788877766655552 38999999999999999863 3
Q ss_pred ehhhHHHHHHHHHHHHHhhhhhhheecccCCcch-hHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcc
Q 008182 445 VFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGM-KTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINR 523 (575)
Q Consensus 445 ~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~-rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~ 523 (575)
...+++.=.+.|+|.++.++...+++++.+|++. ||.++|+.....++|..+||.+.|.++++.++
T Consensus 159 y~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk------------- 225 (464)
T KOG3764|consen 159 YPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGK------------- 225 (464)
T ss_pred hHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCC-------------
Confidence 3467888999999999999999999999999775 69999999999999999999999999987663
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhhc
Q 008182 524 GRLDLFYGLLAILSIINLVIYLICAVWY 551 (575)
Q Consensus 524 ~~~~~~f~~~a~l~~v~~~~~~~~~~~~ 551 (575)
+..|.++++++++....-++..+.+
T Consensus 226 ---~aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 226 ---SAPFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred ---cCcHHHHHHHHHHHHHHHHheeCcc
Confidence 3458999999988888766665543
No 237
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.09 E-value=1.8e-05 Score=85.37 Aligned_cols=164 Identities=12% Similarity=0.063 Sum_probs=109.2
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcc---cchHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF---LGRYKTIAIFAAVQ 102 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Gr~~~~~~~~~~~ 102 (575)
.+|...+..+|.....|+...++|.|+++..|++..+++.+...+.++..++.+++|+++||. ..+|..+...+.++
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 588899999999999999999999999987789999999999999999999999999999993 16666666665554
Q ss_pred HH-HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 103 TL-GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 103 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
.+ |.+.+..... ......+.+....+.....++...-..+....+.+ |-.
T Consensus 354 ~~~g~~~l~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k-----~~~ 404 (495)
T KOG2533|consen 354 AIIGAISLLAAAV------------------------LPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTK-----ALT 404 (495)
T ss_pred HHHHHHHHHhhcc------------------------chHHhHHHHhcchhhHHHHHHHHhhccccccchHH-----hHH
Confidence 44 3233333211 11222222333334444445555666666654441 444
Q ss_pred hhhhhhhhH-HHhHHHHHHHHhhhcccccchhHHHHHH
Q 008182 182 FFSRFFFFI-SLGTLMAVTVLVYIQDEISRSVGYGICS 218 (575)
Q Consensus 182 ~~~~~~~~~-~ig~~l~~~i~~~l~~~~~~~~~f~~~~ 218 (575)
..+.+..+. ..|.+.+++..+.....++|...|+...
T Consensus 405 ~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~ 442 (495)
T KOG2533|consen 405 TVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLV 442 (495)
T ss_pred HHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHH
Confidence 444444444 4444444555555666678888885433
No 238
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.07 E-value=5.5e-05 Score=82.69 Aligned_cols=178 Identities=11% Similarity=-0.004 Sum_probs=117.1
Q ss_pred HHHHHHHHHhhHHHHHHHhhh--cCCCCc------hhhHHHHHHHHHHHHHHHHHH----HHHhhcccchHHHHHHHHHH
Q 008182 34 ELCERLSTMGIAVNLVTYLVG--TMHLPS------ATSANIVTDFMGTSFLLCLLG----GFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 34 ~~~~~~~~~~~~~~l~~yl~~--~l~~~~------~~~~~~~~~~~~~~~~~~~~~----G~laDr~~Gr~~~~~~~~~~ 101 (575)
.+.....+|.+...++.++.. ..+.+. ...+++.++-.+...+..++. +++.||+ +..+.+.+++++
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l 359 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVL 359 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHH
Confidence 335556677777777776553 111111 124455555555555555555 6667776 777889999999
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 102 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
.+++.+.++++..... + ...-+.+++.+..+++++|++...|...+++.+..|++. |++
T Consensus 360 ~~l~f~~l~~~~~~~~--------------~-~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~------rg~ 418 (500)
T PRK09584 360 CSGAFLVLPLGAKFAN--------------D-AGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL------MGF 418 (500)
T ss_pred HHHHHHHHHHHHHhcC--------------C-CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH------HHH
Confidence 9999988877643211 0 011234578888999999999999999999999999998 999
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhcc----------cccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQD----------EISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~----------~~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
.+|.+.....+|..++..+.+.... ..++...|...++..++..++++...+
T Consensus 419 ~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~ 480 (500)
T PRK09584 419 IMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAP 480 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998887777777777666643321 123667777666655544444444333
No 239
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.04 E-value=3.4e-05 Score=61.11 Aligned_cols=67 Identities=24% Similarity=0.150 Sum_probs=55.5
Q ss_pred HHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 008182 34 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQ 102 (575)
Q Consensus 34 ~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 102 (575)
.++...+...+.++++.|++ +.|+|..|.|.+.++..+...++++++|+++||+ ||+|.++....++
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHHH
Confidence 33344444456789999988 5899999999999999999999999999999999 9888877765543
No 240
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.01 E-value=1.4e-05 Score=84.28 Aligned_cols=174 Identities=7% Similarity=-0.011 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHH
Q 008182 30 VLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGML 109 (575)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~ 109 (575)
+++......++...+.+++--+++ +++-.+..-|.....-..+-.+.-++.+++..|+ |+-+++.+++....+=++..
T Consensus 376 ff~~av~mG~g~~lv~tFLfWHle-d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~ 453 (618)
T KOG3762|consen 376 FFFVAVVMGAGVGLVFTFLFWHLE-DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYY 453 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHh-hcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHH
Confidence 455556666666666677766655 5676666677666666777778889999999999 99999999998888877777
Q ss_pred HHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhh
Q 008182 110 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF 189 (575)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 189 (575)
+... |.|+.+..-+++|+..+..+.++.+++++..|++- |.++.++....
T Consensus 454 S~L~------------------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g~ 503 (618)
T KOG3762|consen 454 SYLQ------------------------NPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQGI 503 (618)
T ss_pred HHhc------------------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHHH
Confidence 7763 47778888899999999999999999999999999 88888885554
Q ss_pred -HHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccc
Q 008182 190 -ISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRY 235 (575)
Q Consensus 190 -~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 235 (575)
-.+|-.+|.+++|.+.+.++-+..|.+.++..++.++......+..
T Consensus 504 f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~l 550 (618)
T KOG3762|consen 504 FHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQLLL 550 (618)
T ss_pred hcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 5899999999999999999999999998888777777665554433
No 241
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.97 E-value=0.0023 Score=65.07 Aligned_cols=159 Identities=17% Similarity=0.185 Sum_probs=92.8
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhh-----cccchHHH
Q 008182 20 KTGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLAD-----TFLGRYKT 94 (575)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD-----r~~Gr~~~ 94 (575)
.++..+.+..+++..+...+- +|....+ +++-+.-|.|-++.+....++. =+-.-+++..+.| |+ ||||.
T Consensus 26 ~~~d~~~illLl~LYllQGiP-~GL~~~i-P~lL~ak~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~-Grrks 100 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIP-LGLIGAI-PLLLQAKGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRF-GRRKS 100 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCc-hhHhhhh-HHHhcCCCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhh-ccccc
Confidence 445556777777777766544 4566644 4444466888777665443332 2244678888999 88 99998
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChH
Q 008182 95 IAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEK 174 (575)
Q Consensus 95 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 174 (575)
-++-. -+.+|.++..++...+. + +..+. ..++...+....+++-+..+.---++-...-.+..+++
T Consensus 101 Wvvp~-q~llG~~mllLs~~v~~-----~-----~g~ng-~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~-- 166 (510)
T KOG3574|consen 101 WVVPC-QYLLGLFMLLLSYLVDR-----G-----LGGNG-GLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSREN-- 166 (510)
T ss_pred eeeeh-HHHHHHHHHHHhhCCCc-----c-----cccCC-CCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh--
Confidence 76653 34566666666643322 1 11111 11222222223344444444444455565666666677
Q ss_pred hhhhhhhhhhhhhhhHHHhHHHHHHHH
Q 008182 175 EKTQMAYFFSRFFFFISLGTLMAVTVL 201 (575)
Q Consensus 175 ~~~~r~~~~~~~~~~~~ig~~l~~~i~ 201 (575)
.+.+......+.+.|.+++..+.
T Consensus 167 ----lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 167 ----LGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred ----cCchhHHHHHHHhhhHHhhccee
Confidence 77777777778888888886554
No 242
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.97 E-value=8.2e-05 Score=81.03 Aligned_cols=107 Identities=13% Similarity=0.192 Sum_probs=79.6
Q ss_pred hhHHHHHHHHHHhHHHhh-hhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHH
Q 008182 372 FVSAILITLAVYDRLIMP-LWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIP 450 (575)
Q Consensus 372 ~~~~~~i~~~l~~~~~~~-l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 450 (575)
......+..++.+++.|+ +.+| +.+.+|.++.+++.+.+++.. .....+++
T Consensus 59 ~~~~~~~~~~~~G~laDr~~G~r----------~~~~~g~~~~~~g~~~~~~~~------------------~~~~ll~~ 110 (489)
T PRK10207 59 FAALVYGLISIGGYVGDHLLGTK----------RTIVLGAIVLAIGYFMTGMSL------------------LKPDLIFI 110 (489)
T ss_pred HHHHHHHHHhhHHHhhhhccchH----------HHHHHHHHHHHHHHHHHHHhc------------------cchhHHHH
Confidence 344444555666776655 4443 447889988888887776541 11222446
Q ss_pred HHHHHHHHHHHhhhhhhheecccCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008182 451 QFFLVGAGEAFIYTGQLDFFITKSPKG--MKTMSTGLFLTTLSLGFFVSSFLVAVVKK 506 (575)
Q Consensus 451 ~~~l~g~g~~~~~~~~~~~~~~~~P~~--~rg~~~g~~~~~~~lg~~lg~~l~~~v~~ 506 (575)
..++.++|.++..|...+++.+.+|++ .|+.+.+++.+..++|..+|+.+.+++.+
T Consensus 111 ~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~ 168 (489)
T PRK10207 111 ALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIAD 168 (489)
T ss_pred HHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 778889999999999999999999877 45778999999999999999999998864
No 243
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.95 E-value=0.00034 Score=72.74 Aligned_cols=163 Identities=14% Similarity=0.157 Sum_probs=123.8
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcc---cchHHHHHHH-HH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF---LGRYKTIAIF-AA 100 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Gr~~~~~~~-~~ 100 (575)
+.++.+..+.+...+++-.=..++++|+. .+|.+.+-.+.+-.+-.+...+.+|+.|..+||+ +||||-++.. ..
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 56777777777777877766788999988 7899999999999999999999999999999986 5888866665 45
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccc----hhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhh
Q 008182 101 VQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASG----FQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEK 176 (575)
Q Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 176 (575)
..+++.++..++.... +..++.+.. .....++++.-+.=+.+-.....+-++++|+..++++
T Consensus 111 ~i~~~l~Lig~aaDig-----------~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~--- 176 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIG-----------LLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK--- 176 (498)
T ss_pred HHHHHHhhhhhHhhhh-----------HHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh---
Confidence 5666777777774322 233444433 4456677777777788777788889999999876662
Q ss_pred hhhhhhhhhhhhhHHHhHHHHHHHHhhh
Q 008182 177 TQMAYFFSRFFFFISLGTLMAVTVLVYI 204 (575)
Q Consensus 177 ~~r~~~~~~~~~~~~ig~~l~~~i~~~l 204 (575)
+.++.+++...+.+|+.+|-..+++.
T Consensus 177 --~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 177 --KTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred --hhccchhHHHHHHhcceeeeeccccc
Confidence 22288888888899999887777644
No 244
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.92 E-value=0.0091 Score=64.14 Aligned_cols=163 Identities=12% Similarity=0.090 Sum_probs=99.9
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCC-----CchhhHHHHHHHHHHHHHH-HHHHHHHhhcccchHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHL-----PSATSANIVTDFMGTSFLL-CLLGGFLADTFLGRYKTIAI 97 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~-----~~~~~~~~~~~~~~~~~~~-~~~~G~laDr~~Gr~~~~~~ 97 (575)
+|.++...+..||-.+.|+.+.+ ++|.+.. +.....++-+...+...+. .++-+++++|+ +|++.+.+
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~ 79 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYT 79 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHH
Confidence 45566666777777776664432 3555554 3356666666665554544 78899999998 99999988
Q ss_pred HHHHHHHHHHHHHHHhhhcc---cCCC-CCCCcCcccccCccch----------hhHHHHHHHHHHHHccccccc-chhc
Q 008182 98 FAAVQTLGTGMLAMVTKLRQ---LRPR-PCKETATHTCEQASGF----------QMGVLYIALYLIALGTGGLKS-SVSG 162 (575)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~g~g~g~~~~-~~~~ 162 (575)
....+.....+.++.-. |. +++. .||+ .....|.+. ....+++ ...+-.....+ .-.+
T Consensus 80 ~~~~F~~~f~lF~~vl~-p~~~~~~p~~~~~~---~~~~~~~~~~~~i~~~~~W~~~~FYv---~~elw~~~vvS~lFW~ 152 (472)
T TIGR00769 80 VISPFLGFFALFAFVIY-PLSDLLHPTALADK---LLSLLPPGFMGFIAILRIWSFALFYV---MAELWGSVVLSLLFWG 152 (472)
T ss_pred HHHHHHHHHHHHHHHHh-cchhhcCCcHHHHH---HHhhcchhhHHHHHHHhhhhHHHHHH---HHHHHHHHHHHHHHHH
Confidence 87777776666655521 21 1110 0000 000011101 1112222 22222223333 5678
Q ss_pred cccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhc
Q 008182 163 FGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ 205 (575)
Q Consensus 163 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~ 205 (575)
+..|.++.++ -.|.++++..+.|+|..+++.+..++.
T Consensus 153 fandi~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 153 FANQITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888 789999999999999999999988876
No 245
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.89 E-value=2.1e-07 Score=100.10 Aligned_cols=185 Identities=14% Similarity=0.099 Sum_probs=114.0
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
.....+....+..+..+....+..+++.+..+.+.. -.......+...++.+++.++.||+ |||++++++..+.++.
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccc
Confidence 444445555555555544555555666667777776 2223344455667778888999999 9999999999888887
Q ss_pred HHHHH-HHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 106 TGMLA-MVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 106 ~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
.+.++ ...-.+. .++..+................+..+....+.+|.||.+. |.++.+
T Consensus 330 ~~~~~~~~~~~~~---------------~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~ 388 (451)
T PF00083_consen 330 SLILGIIFFLGVS---------------SSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIG 388 (451)
T ss_pred ccccccccccccc---------------cccccccccceeeeeccccccccccccccccccccccccc------cccccc
Confidence 76664 1100000 0000011111111111112222344666688899999999 999999
Q ss_pred hhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCcc
Q 008182 185 RFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKR 234 (575)
Q Consensus 185 ~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 234 (575)
+.+....+++.+++.+..++.+..+-...|.+.++..++..+...+..|+
T Consensus 389 ~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpE 438 (451)
T PF00083_consen 389 LSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPE 438 (451)
T ss_pred cccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEee
Confidence 99999999999999888888877663455555555555555554444443
No 246
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.87 E-value=2.9e-05 Score=84.09 Aligned_cols=143 Identities=9% Similarity=-0.134 Sum_probs=110.1
Q ss_pred hhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCccccc
Q 008182 53 VGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCE 132 (575)
Q Consensus 53 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 132 (575)
.+.+|+++.+.|.+.....++..++..+.+++.+|+ +.|+++.++.++.+++........+..++
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~-------------- 344 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNL-------------- 344 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeecccc--------------
Confidence 457999999999999999999999999999999998 99999999998888876554321110000
Q ss_pred CccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhccccc---
Q 008182 133 QASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEIS--- 209 (575)
Q Consensus 133 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~--- 209 (575)
.....+........++.+++.+........++.+..|++. +++.++++....++|..+++.+++++.+..|
T Consensus 345 ~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~ 418 (468)
T TIGR00788 345 AFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIGITC 418 (468)
T ss_pred ccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 0000112234444567777777777778899999999998 9999999999999999999999999988877
Q ss_pred --chhHHHH
Q 008182 210 --RSVGYGI 216 (575)
Q Consensus 210 --~~~~f~~ 216 (575)
++..+..
T Consensus 419 ~~~~~~~~~ 427 (468)
T TIGR00788 419 DNSNNLWLL 427 (468)
T ss_pred ccccchHHH
Confidence 6655543
No 247
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.80 E-value=0.00028 Score=76.35 Aligned_cols=135 Identities=14% Similarity=0.184 Sum_probs=87.3
Q ss_pred cchhHHHHHHHHHHhHHHhhh-hhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhh
Q 008182 370 VFFVSAILITLAVYDRLIMPL-WKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLL 448 (575)
Q Consensus 370 ~~~~~~~~i~~~l~~~~~~~l-~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 448 (575)
........+..++.+++.||+ .+| +.+.+|.++.+++.+.++.. ..+...+
T Consensus 52 ~~~~~~~~l~~ligG~LaDRilGrr----------r~iliG~il~~lg~lll~~~------------------~~~~~~~ 103 (493)
T PRK15462 52 SAYCSLVYVTPILGGFLADKVLGNR----------MAVMLGALLMAIGHVVLGAS------------------EIHPSFL 103 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCcH----------HHHHHHHHHHHHHHHHHHHh------------------hcchhHH
Confidence 333444455556667776665 333 33677888888776655432 1111223
Q ss_pred HHHHHHHHHHHHHhhhhhhheecccCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcccch
Q 008182 449 IPQFFLVGAGEAFIYTGQLDFFITKSPKG--MKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRL 526 (575)
Q Consensus 449 i~~~~l~g~g~~~~~~~~~~~~~~~~P~~--~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~ 526 (575)
.....+..+|.++..|...+++.+.+|++ .|+++.++.....++|+.+++.+.+.+.+.. +|
T Consensus 104 ~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~------Gw---------- 167 (493)
T PRK15462 104 YLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY------SW---------- 167 (493)
T ss_pred HHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh------Ch----------
Confidence 33444555677777777788899999875 7999999999999999999999999875422 33
Q ss_pred hHHHHHHHHHHHHHHHHHHhhh
Q 008182 527 DLFYGLLAILSIINLVIYLICA 548 (575)
Q Consensus 527 ~~~f~~~a~l~~v~~~~~~~~~ 548 (575)
+..|.+.++.++++.+.++...
T Consensus 168 ~~~F~iaaigm~l~li~~~~~~ 189 (493)
T PRK15462 168 AMGFGLAAVGMIAGLVIFLCGN 189 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 5666666555555555554433
No 248
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.77 E-value=0.00041 Score=76.13 Aligned_cols=193 Identities=16% Similarity=0.068 Sum_probs=111.8
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 22 GGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
..+|.....+.+..+..++.+....+....+-+..|.+... .+...+..+...++..++.++.||+ |||+.++.+...
T Consensus 291 ~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~ 368 (513)
T KOG0254|consen 291 KVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAG 368 (513)
T ss_pred chHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHH
Confidence 34555555555566655555544444444445566766554 5556666777778888889999999 999999999999
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 102 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
+.++.++++........ +.. .........+....+.......+..|....+.+|.+|.+. |++
T Consensus 369 m~~~~~~~~~~~~~~~~---------~~~--~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~------r~~ 431 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALY---------YPN--SSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRL------RSK 431 (513)
T ss_pred HHHHHHHHHHHHHHhcc---------CCC--cccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhH------Hhh
Confidence 99999888876432110 000 0000111112111222222223344555678899999998 888
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHH-HHHhcCc
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAII-IFLAGTK 233 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~-~~~~~~~ 233 (575)
+.++......+...+.......+.+..++...|...+........ ...+..|
T Consensus 432 ~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~p 484 (513)
T KOG0254|consen 432 GASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVP 484 (513)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcc
Confidence 888866555544444433333443333345555555555454444 3444444
No 249
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.56 E-value=8.1e-05 Score=77.31 Aligned_cols=181 Identities=11% Similarity=0.008 Sum_probs=124.0
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHH--------HHHHHHHHHHH-HHHHHHHHhhcccchHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSAN--------IVTDFMGTSFL-LCLLGGFLADTFLGRYKTI 95 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~--------~~~~~~~~~~~-~~~~~G~laDr~~Gr~~~~ 95 (575)
+.+...+...|...+.+|+...+...-+. .+|+.+.+... ...+....+.+ +-++...+.|++ |||++.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHH
Confidence 55666777777888888888777666554 44554433222 22222333333 566778889998 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHh
Q 008182 96 AIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKE 175 (575)
Q Consensus 96 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 175 (575)
+-+.+++++..+.++..-+ ++. .....+...-+.+-+++-+.......+-+|.||.+.
T Consensus 382 ~~GF~~~~i~~~~~~~~y~-------------~~~------~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParv--- 439 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGPYN-------------QLE------NTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARV--- 439 (538)
T ss_pred HhhHHHHHHHHHHHcCCcc-------------ccc------ccCceeehHHHHHHHHhcCCCceeEEeehhhchHHH---
Confidence 9999999988777766421 111 111111111222334444444455566699999999
Q ss_pred hhhhhhhhhhhhhhHHHhHHHHHHHHhhhcc-----cccchhHHHHHHHHHHHHHHHHHhcC
Q 008182 176 KTQMAYFFSRFFFFISLGTLMAVTVLVYIQD-----EISRSVGYGICSVAMFMAIIIFLAGT 232 (575)
Q Consensus 176 ~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~-----~~~~~~~f~~~~~~~~~~~~~~~~~~ 232 (575)
|+...++...++-.|++++.....++.+ ..+.+.+|++.+...+++.+..++..
T Consensus 440 ---R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 440 ---RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred ---hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEee
Confidence 9999999999999999999999999998 77899999998888887777765553
No 250
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.51 E-value=0.0023 Score=68.06 Aligned_cols=107 Identities=15% Similarity=0.053 Sum_probs=82.4
Q ss_pred cccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehh
Q 008182 368 LTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFL 447 (575)
Q Consensus 368 ~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (575)
+.......-.++....+++.+++..| +.+.++.+..++..++.++. .+...
T Consensus 67 I~s~F~ysYal~qIp~GlLaDrlG~K----------~vL~l~~l~Wsl~t~L~~fa-------------------~Sl~~ 117 (511)
T TIGR00806 67 IIPVLPYSHLAVLVPVFLLTDYLRYK----------PVLVLQALSFVCVWLLLLLG-------------------TSVWH 117 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCch----------HHHHHHHHHHHHHHHHHHHH-------------------HHHHH
Confidence 33344444555555556664444433 33677777777777777664 24556
Q ss_pred hHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008182 448 LIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVV 504 (575)
Q Consensus 448 li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v 504 (575)
+.+.-+++|++|+... +...++++.+|++.|++++|+++....+|.++++.+++.+
T Consensus 118 L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 118 MQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999 9999999999999999999999999999999999999983
No 251
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.50 E-value=0.001 Score=70.88 Aligned_cols=159 Identities=15% Similarity=0.087 Sum_probs=105.0
Q ss_pred cccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccc-e
Q 008182 366 GSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPV-S 444 (575)
Q Consensus 366 ~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 444 (575)
++..+...++..+..|.++.. ..|.. +-.+-+.+|.+++.++.+++...+.. +. .
T Consensus 74 G~viaa~slg~~i~~liF~~W----s~k~~-----~~k~Pli~s~ii~~~g~llY~~l~~~---------------~~~~ 129 (488)
T KOG2325|consen 74 GLVIAASSLGHAIFSLIFGIW----SNKTG-----SVKKPLIVSFLIAIIGNLLYLALAYV---------------PNGV 129 (488)
T ss_pred hHHHHHHHHHHHhcchhhccc----ccccC-----CcccCHHHHHHHHHHHHHHHHHHHhc---------------ccch
Confidence 445556777777777777655 22322 11222899999999999999666432 23 4
Q ss_pred ehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccC-CCcc
Q 008182 445 VFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLAD-NINR 523 (575)
Q Consensus 445 ~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~-~~~~ 523 (575)
-+++.+..++.|+|.+.. ...-.|+++..-.+.|-++++..+..+.+|..+||.+-..+..+.+++ -.|+++ .+|.
T Consensus 130 ~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G--~~i~~~~~~n~ 206 (488)
T KOG2325|consen 130 KYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKG--FMILPGLIFNM 206 (488)
T ss_pred HHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCc--eEEcCcceEEe
Confidence 566788899999886533 456677777666667777888777777788888877777665554432 234442 2332
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 008182 524 GRLDLFYGLLAILSIINLVIYLICAVWYKP 553 (575)
Q Consensus 524 ~~~~~~f~~~a~l~~v~~~~~~~~~~~~~~ 553 (575)
+...-|+++.+.++..++.+++.+|..+
T Consensus 207 --YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 207 --YTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred --cchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 3444578888888888888777776543
No 252
>PTZ00207 hypothetical protein; Provisional
Probab=97.35 E-value=0.0023 Score=70.57 Aligned_cols=116 Identities=12% Similarity=0.096 Sum_probs=81.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHH
Q 008182 403 LQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMS 482 (575)
Q Consensus 403 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~ 482 (575)
++.+.+|.++..++.++.++.... .-..+.+.+.+..++.|+|++..++.....+.+.+| +.||++
T Consensus 91 R~vllig~ll~~iG~ll~ala~~~-------------~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a 156 (591)
T PTZ00207 91 RPIFVLSMTVFCLGTLLFALTFQE-------------VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAV 156 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc-------------cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHH
Confidence 344788999999999887764110 001345556778889999999998888888888887 679999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhh
Q 008182 483 TGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAV 549 (575)
Q Consensus 483 ~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~ 549 (575)
+|+......+|..+.+.+...+.. .+| ..+|++.+++.++..++.+.+.+
T Consensus 157 ~Gi~~~~~gLGsaI~~~l~~~l~~-------~~~----------~~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 157 VAIMKTFTGLGSAILGSIQLAFFS-------DNT----------SAYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------HhH----------HHHHHHHHHHHHHHHHHHHhhee
Confidence 999999999999865555444332 012 45567777777776666655544
No 253
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.26 E-value=0.0038 Score=56.62 Aligned_cols=112 Identities=13% Similarity=0.118 Sum_probs=85.2
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchh
Q 008182 59 PSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQ 138 (575)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (575)
+....-.-.++.+....+.++++..+.+++ |.|++++++.+.+.+-..... - | +
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~-~---~---------------------~ 88 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFF-Y---P---------------------N 88 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHH-h---h---------------------h
Confidence 334444555666777788888889999998 999999999887776433322 1 2 3
Q ss_pred hHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHh
Q 008182 139 MGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 202 (575)
Q Consensus 139 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~ 202 (575)
...++.+-++.|+|.+..+.+...++.+..++++ |++..+++....+.+.++|.++.-
T Consensus 89 ~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 89 SYTLYPASALLGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHHH
Confidence 6678889999999999999999999999887777 888888877777777777765543
No 254
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.24 E-value=0.0048 Score=64.40 Aligned_cols=185 Identities=12% Similarity=0.013 Sum_probs=115.0
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.+.++.+........+|++.+.+-.-+ ..-|++...+|.+.....+.+.++.+++|.++||..+-|.++++......+
T Consensus 266 ~~F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v 344 (480)
T KOG2563|consen 266 RQFIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALV 344 (480)
T ss_pred ccHHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH
Confidence 3455555555555555555544443222 345788889999999999999999999999999985556666666666556
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhcccccc-CCCCChHhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQ-FDEKDEKEKTQMAYFF 183 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~-~~~~~~~~~~~r~~~~ 183 (575)
+...+...+..+ .....++..-.++|.......|.-.-+..|. +|..+ +.-.
T Consensus 345 ~~~~l~~~t~~~--------------------~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E-------~tSs 397 (480)
T KOG2563|consen 345 GTLMLLTCTLFL--------------------GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE-------GTSS 397 (480)
T ss_pred HHHHHHHhhccC--------------------CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC-------cccc
Confidence 543222221111 1234455555566666666777777777666 55555 4556
Q ss_pred hhhhhhHHHhHHHHHHHHhhhccccc----chhHHHHHHHHHHHHHHHHHhcCccccc
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEIS----RSVGYGICSVAMFMAIIIFLAGTKRYRY 237 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~----~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 237 (575)
|+.....++-+.+=..+.+...+..+ |...-+......+..+++..+.++++++
T Consensus 398 Gll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 398 GLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred eeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence 67666666666666667777777666 4433344444555555665666665544
No 255
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.11 E-value=0.0054 Score=67.52 Aligned_cols=157 Identities=14% Similarity=0.064 Sum_probs=110.6
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCch---hhHHHHHHHHHHHHHHHHHHHHHhhcccchHH-H
Q 008182 19 SKTGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSA---TSANIVTDFMGTSFLLCLLGGFLADTFLGRYK-T 94 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~-~ 94 (575)
++.++.|.+...+++.+.....+|.+..+.|......++.+.. +.++....+.++..+++++.|.+.-++ +|-| .
T Consensus 304 ~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~ 382 (599)
T PF06609_consen 304 RLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQ 382 (599)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHH
Confidence 4444567888888889999988999888888877766666653 567888888888889999999999887 7655 4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChH
Q 008182 95 IAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEK 174 (575)
Q Consensus 95 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 174 (575)
++++..++.++..+++.. + | + |....+...++.|+|.|...........-..|++.
T Consensus 383 li~~~~~~ta~~Gama~~-~-~------------------~--n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~-- 438 (599)
T PF06609_consen 383 LIFGSVLMTAFCGAMAAV-R-P------------------D--NKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDED-- 438 (599)
T ss_pred HHHHHHHHHHHHHHHHHc-c-C------------------C--CcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchH--
Confidence 456666666655555433 1 1 1 22223455667788888766555555555567666
Q ss_pred hhhhhhhhhhhhhhhHHHhHHHHHHHHhhh
Q 008182 175 EKTQMAYFFSRFFFFISLGTLMAVTVLVYI 204 (575)
Q Consensus 175 ~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l 204 (575)
.+.+.++....-.+|+.+|..+-.-+
T Consensus 439 ----ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 439 ----IGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred ----HHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 88999888888888888876655433
No 256
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.02 E-value=0.0046 Score=63.17 Aligned_cols=152 Identities=13% Similarity=0.069 Sum_probs=113.8
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHh-hhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccch-HHHHHHHHHHHH
Q 008182 26 PAALVLGIELCERLSTMGIAVNLVTYL-VGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGR-YKTIAIFAAVQT 103 (575)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~l~~yl-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-~~~~~~~~~~~~ 103 (575)
..+.++....+...-.|...-+...++ .+.+|+++.|.|-+.+...+...+.+..-+...||.+|. +..+..++.++.
T Consensus 261 ~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~v 340 (451)
T KOG2615|consen 261 SVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIV 340 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHH
Confidence 345555554444444443434444444 568999999999998888888888888888888988443 445555555555
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
-..++.+.+.+ ...++++..+-.+..+...++...++....|++. ||...
T Consensus 341 P~~llls~~~~------------------------~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q------rG~~~ 390 (451)
T KOG2615|consen 341 PAFLLLSLART------------------------PVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ------RGTLN 390 (451)
T ss_pred HHHHHHhcccc------------------------chhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc------chHHH
Confidence 55556655522 5568888889999989999999999999999888 99999
Q ss_pred hhhhhhHHHhHHHHHHHHhhhccc
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDE 207 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~ 207 (575)
|+....+.++-++||.++|.+..+
T Consensus 391 Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 391 GIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HHHHHHHHHHHHhhhhhhheeEEE
Confidence 999999999999999999988663
No 257
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.87 E-value=0.01 Score=47.59 Aligned_cols=67 Identities=12% Similarity=0.057 Sum_probs=59.5
Q ss_pred HHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHh
Q 008182 46 VNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVT 113 (575)
Q Consensus 46 ~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~ 113 (575)
+.+-+.+.++.++|.++.+++-+.-++++.++.+...++.++. .+++.+..+++...+.++.+++..
T Consensus 12 TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 12 TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455667789999999999999999999999999999999997 889999999999999888888763
No 258
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.83 E-value=0.0048 Score=69.22 Aligned_cols=96 Identities=24% Similarity=0.425 Sum_probs=77.1
Q ss_pred CCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 008182 438 TATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWL 517 (575)
Q Consensus 438 ~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~ 517 (575)
.++++.+.+|.++++++.++||.+...+.+++.++++|+++|....+++.+..++|+.+...+..+-.
T Consensus 558 ~~~~~~~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~------------ 625 (654)
T TIGR00926 558 VSVNTVSILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFEN------------ 625 (654)
T ss_pred cCCCceeHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------------
Confidence 55667899999999999999999999999999999999999999999999999999999988776421
Q ss_pred cCCCcccchhHHHHHHHHHHHHHHHHHHhhhhh
Q 008182 518 ADNINRGRLDLFYGLLAILSIINLVIYLICAVW 550 (575)
Q Consensus 518 ~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~ 550 (575)
.++ ...-|..+++++++..+++.++++.
T Consensus 626 ---~~~--~~~~~~~~~~~~~~~~~~f~~~a~~ 653 (654)
T TIGR00926 626 ---FSV--QAAEFFLFASLMLVVMAIFSILAYF 653 (654)
T ss_pred ---ChH--HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 101 1233566677777666666666543
No 259
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.74 E-value=0.006 Score=65.53 Aligned_cols=153 Identities=16% Similarity=0.121 Sum_probs=117.7
Q ss_pred CcchhHHHHHHHHHHHHHHH-hhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 23 GWVPAALVLGIELCERLSTM-GIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
+.|..+.+++..+.....-. +..-.+..|+..+++++..+.+...+.......+++++...+--+.+|-|+++.+|+..
T Consensus 238 ~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~ 317 (463)
T KOG2816|consen 238 PDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLS 317 (463)
T ss_pred CCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHH
Confidence 34445554444444333222 22224467888899999999999999999999999988885544445999999999999
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhh
Q 008182 102 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 181 (575)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 181 (575)
..+...+.++++. .++.+.+..+.++. +...|...++.+.+.++++ +|+
T Consensus 318 ~~~~~~~~af~~~------------------------~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v~~~e------~g~ 366 (463)
T KOG2816|consen 318 EFLQLLLFAFATE------------------------TWMMFAAGVVVALA-GIVFPAIRAFASILVSPEE------QGK 366 (463)
T ss_pred HHHHHHHHHHhcc------------------------chhhhHHHHHHHhh-cchhHHHHhHHHhhccccc------ccc
Confidence 9999999999843 55566666665555 6677999999999999999 999
Q ss_pred hhhhhhhhHHHhHHHHHHHHhhhcc
Q 008182 182 FFSRFFFFISLGTLMAVTVLVYIQD 206 (575)
Q Consensus 182 ~~~~~~~~~~ig~~l~~~i~~~l~~ 206 (575)
.+++....-.+.+.++|.+-+.+..
T Consensus 367 v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 367 VFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred hhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 9999999999999999888877744
No 260
>PRK03612 spermidine synthase; Provisional
Probab=96.44 E-value=0.089 Score=57.68 Aligned_cols=170 Identities=12% Similarity=0.046 Sum_probs=92.5
Q ss_pred HHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH---HHHH
Q 008182 33 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG---TGML 109 (575)
Q Consensus 33 ~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~---~~l~ 109 (575)
+.+...++.-.......-.+...+|-+..+.+.+++++.++..++..++|+++++. -|+. ..+-+.+..++ ..++
T Consensus 22 ~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~-~~~e~~i~l~~~~~~~ll 99 (521)
T PRK03612 22 AVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGF-VAVELLLALLGGLSALIL 99 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHH-HHHHHHHHHHHHHHHHHH
Confidence 33344444444445555566667788999999999999999999999999887554 2222 22211111111 1111
Q ss_pred HHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhh
Q 008182 110 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF 189 (575)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 189 (575)
........ .....++...++.++-.|+..|....+..+... ++ -++..|..|.+
T Consensus 100 ~~~~~~~~-------------------~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~------~g~~~g~ly~~ 153 (521)
T PRK03612 100 YAAFAFQG-------------------LSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QH------LGHNVATVLAA 153 (521)
T ss_pred HHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc------hhhhhhhhHhH
Confidence 11100000 001112233344566666666665555443221 12 35667788888
Q ss_pred HHHhHHHHHHHHhhhcc-cccch-hHHHHHHHHHHHHHHHHHh
Q 008182 190 ISLGTLMAVTVLVYIQD-EISRS-VGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 190 ~~ig~~l~~~i~~~l~~-~~~~~-~~f~~~~~~~~~~~~~~~~ 230 (575)
..+|+++|.++.+++.- ..|-. ..+.++.+-.+++++.++.
T Consensus 154 ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~~ 196 (521)
T PRK03612 154 DYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLWL 196 (521)
T ss_pred HhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888654 56644 4444443333444444333
No 261
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.41 E-value=0.00051 Score=75.43 Aligned_cols=134 Identities=16% Similarity=0.185 Sum_probs=3.0
Q ss_pred cccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH----HH-hhCC----
Q 008182 366 GSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSV----AR-AVGL---- 436 (575)
Q Consensus 366 ~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~-~~~~---- 436 (575)
+.+...+-+..++...++.++ .+|. ++.+.+.+|.++++++.+++++-+...... .. ..+.
T Consensus 41 G~i~s~~di~~~~~~~~vsy~----g~~~------hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~ 110 (539)
T PF03137_consen 41 GLISSSYDIGSLVVVLFVSYF----GGRG------HRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSIS 110 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHH----hhhc------CCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccc
Confidence 344555556666666555555 3331 234558889999999988887653221100 00 0000
Q ss_pred --------------------C--CCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHH
Q 008182 437 --------------------T--TATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGF 494 (575)
Q Consensus 437 --------------------~--~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~ 494 (575)
+ .........++++..++.|+|....++...+|+.|.++++..+.+.|+......+|.
T Consensus 111 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGP 190 (539)
T PF03137_consen 111 SNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGP 190 (539)
T ss_dssp -----------------------------------------SSS------------------------------------
T ss_pred cccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccH
Confidence 0 111112245677889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhcC
Q 008182 495 FVSSFLVAVVKKVTG 509 (575)
Q Consensus 495 ~lg~~l~~~v~~~~~ 509 (575)
.+|-.+.+...+.+.
T Consensus 191 a~Gf~lg~~~L~~yv 205 (539)
T PF03137_consen 191 ALGFLLGSFCLRIYV 205 (539)
T ss_dssp ---------------
T ss_pred HHHHHHHHHHHhcee
Confidence 999888887776554
No 262
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.27 E-value=0.039 Score=61.64 Aligned_cols=106 Identities=15% Similarity=0.115 Sum_probs=75.9
Q ss_pred hhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcccch
Q 008182 447 LLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRL 526 (575)
Q Consensus 447 ~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~ 526 (575)
.++...++.|+|+...+|...+|+.|.+-++....+.|+......+|.++|-+++++..+++.+.+..+ ...+.++..-
T Consensus 239 lff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~-~~it~~DPrW 317 (735)
T KOG3626|consen 239 LFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSP-IGITPTDPRW 317 (735)
T ss_pred HHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCC-CCCCCCCcch
Confidence 456789999999999999999999999999999999999999999999999999999888776541000 0001111111
Q ss_pred hHH----HHHHHHHHHHHHHHHHhhhhhcCC
Q 008182 527 DLF----YGLLAILSIINLVIYLICAVWYKP 553 (575)
Q Consensus 527 ~~~----f~~~a~l~~v~~~~~~~~~~~~~~ 553 (575)
... |.+.+.+.++..+.++++-++..+
T Consensus 318 IGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 318 IGAWWLGFLICGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCcccCcc
Confidence 122 455566666666666666555443
No 263
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.22 E-value=0.089 Score=57.80 Aligned_cols=121 Identities=10% Similarity=0.046 Sum_probs=81.4
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCc
Q 008182 55 TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQA 134 (575)
Q Consensus 55 ~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (575)
.+|.+......+... .........+.+.|++ |||.....+..+..++.+..++....
T Consensus 347 ~lg~~~~~~~~~~~~---~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~~~~~~~~~~~~------------------- 403 (521)
T KOG0255|consen 347 GLGGNIYLNFTLSGL---VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGIGLLLFGWLPDD------------------- 403 (521)
T ss_pred hcCchHHHHHHHHHH---HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHhhcc-------------------
Confidence 455444433333332 4445556668999998 99999999999999998888876321
Q ss_pred cchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcc
Q 008182 135 SGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD 206 (575)
Q Consensus 135 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~ 206 (575)
.+.....+...+...+.+..........+|++|+.. |..+.+.......+|.+++|.+......
T Consensus 404 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~------r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 404 --LGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVV------RNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred --chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 111112222223333333334445788899999998 9999999999999999999988765544
No 264
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.37 E-value=0.36 Score=51.41 Aligned_cols=134 Identities=11% Similarity=-0.032 Sum_probs=103.1
Q ss_pred HHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCC
Q 008182 45 AVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCK 124 (575)
Q Consensus 45 ~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 124 (575)
-..+..|+..+ |+++...|..-+.-.+....+.....++-+|+ |..|+=++++....+...++..+--.|.
T Consensus 278 ~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~------- 348 (432)
T PF06963_consen 278 GGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPG------- 348 (432)
T ss_pred cHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCC-------
Confidence 45678899977 99999999999999999999999999999999 9999999999888777666555422222
Q ss_pred CcCcccccCc-cchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHH
Q 008182 125 ETATHTCEQA-SGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 201 (575)
Q Consensus 125 ~~~~~~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~ 201 (575)
.+ .......++.+.++-=+|--++--+...++.|..|+++ |+...+......++.-.+-..++
T Consensus 349 --------~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 349 --------SPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred --------CCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHHHHHHHHHHHH
Confidence 11 22344555555555556666677788888999999888 99999998888888777765443
No 265
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.35 E-value=4.4 Score=42.50 Aligned_cols=58 Identities=17% Similarity=0.140 Sum_probs=46.7
Q ss_pred ceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 008182 443 VSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFL 500 (575)
Q Consensus 443 ~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l 500 (575)
.+.+|.+....++|+..+-.....+.++.+.+|++.+-.+..+..+.-..|-..|..+
T Consensus 341 ~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 341 ESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred cCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 3456778888899998888888899999999999988888888777777777766554
No 266
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=94.93 E-value=0.28 Score=48.21 Aligned_cols=92 Identities=20% Similarity=0.253 Sum_probs=64.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhH
Q 008182 401 TNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKT 480 (575)
Q Consensus 401 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg 480 (575)
.+...+.+|.+...+++....+.-..+ .+..+.+.+.+..++.+.+....+++......+.+|+ .||
T Consensus 64 gp~~~l~iG~~~~~~GY~~~~l~~~~~------------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG 130 (250)
T PF06813_consen 64 GPWVVLLIGAVLGFVGYGLLWLAVSGR------------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRG 130 (250)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCc------------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccC
Confidence 445557888888888887776543210 0113344455556666677777777776667788885 699
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Q 008182 481 MSTGLFLTTLSLGFFVSSFLVAVVK 505 (575)
Q Consensus 481 ~~~g~~~~~~~lg~~lg~~l~~~v~ 505 (575)
++.|+.-....+++.+-+.+...+.
T Consensus 131 ~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 131 TVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred ceehhhhHHHHhHHHHHHHHHHHHc
Confidence 9999999999999988888777654
No 267
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=94.59 E-value=0.25 Score=52.69 Aligned_cols=168 Identities=13% Similarity=0.052 Sum_probs=110.5
Q ss_pred HHHHHHhhhcCCCC----chhhHHHHHHHHHHHHHHHHHHHHHhhcccchH-------HHHHHHHHHHHHHHHHHHHHhh
Q 008182 46 VNLVTYLVGTMHLP----SATSANIVTDFMGTSFLLCLLGGFLADTFLGRY-------KTIAIFAAVQTLGTGMLAMVTK 114 (575)
Q Consensus 46 ~~l~~yl~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~-------~~~~~~~~~~~~~~~l~~~~~~ 114 (575)
+.+..|..+.-+.+ +-..++..+.-.+...+..|+..++--+. +++ .-+-+++++...+.+++.....
T Consensus 305 ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l-~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~ 383 (498)
T COG3104 305 SSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKL-GRGNKQPSTPIKFALGLILAGLGFLILLLAGI 383 (498)
T ss_pred chHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHh-hcCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 44556665543322 23344566666666777777777777774 443 2455666667777666555411
Q ss_pred hcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhH
Q 008182 115 LRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGT 194 (575)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 194 (575)
... +..+.....+++.+.+++++|+=+..|.-.++++...|++- .+..++.+......|.
T Consensus 384 ~~~--------------~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~------~s~~ma~wfLt~a~~~ 443 (498)
T COG3104 384 WFG--------------GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPAL------KSFIMAMWFLTVAAGQ 443 (498)
T ss_pred hhc--------------CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHH------HHHHHHHHHHHHHHHH
Confidence 000 00223447788899999999999999999999999999877 7888888888888888
Q ss_pred HHHHHHHhh------hcccccchhHHHHHHHHHHHHHHHHHhcCcc
Q 008182 195 LMAVTVLVY------IQDEISRSVGYGICSVAMFMAIIIFLAGTKR 234 (575)
Q Consensus 195 ~l~~~i~~~------l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 234 (575)
.++..+.+. ..+.......|+..+...++..+.+....|+
T Consensus 444 ~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~ 489 (498)
T COG3104 444 TLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLSPK 489 (498)
T ss_pred HhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHH
Confidence 887766663 2233456777887777766665555555443
No 268
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.42 E-value=0.26 Score=51.64 Aligned_cols=124 Identities=17% Similarity=0.220 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcc---hhHH
Q 008182 405 RMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKG---MKTM 481 (575)
Q Consensus 405 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~---~rg~ 481 (575)
.+..|.++..+|.+++.+..... ......+...+.+..++.++|.+..=|....+..++++++ .|..
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~~----------~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~ 72 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIPP----------SLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDS 72 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTSS----------SC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhcc----------hhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhh
Confidence 47788889999988865542100 0001233456788889999999999999999999999866 4555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 008182 482 STGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYKPK 554 (575)
Q Consensus 482 ~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~~~ 554 (575)
....+....++|..++..+.+++.+.. + ....|.+.++.++++.+.++...++++..
T Consensus 73 ~F~~fY~~in~G~~~~~~~~~~i~~~~------~----------~~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 73 FFNWFYWGINIGSLFSPTLVPYIQQNY------G----------WFLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHCS-----------------HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred hHHHHHHHHhhhhHhhcccchhhcccc------c----------hhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 666778888999999988888775321 2 35667777777787777776665555544
No 269
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.15 E-value=8.7 Score=41.75 Aligned_cols=167 Identities=13% Similarity=0.071 Sum_probs=91.0
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcC---CCCchhhHHHHHHH-HHHHHHHHHHHHHHhhcccchHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTM---HLPSATSANIVTDF-MGTSFLLCLLGGFLADTFLGRYKTIAIFA 99 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---~~~~~~~~~~~~~~-~~~~~~~~~~~G~laDr~~Gr~~~~~~~~ 99 (575)
++.++.+.+..+|-.+.|..+ --++|.+ ..++.....+-... .=...+..++-.+++|++ +|.+++.+..
T Consensus 23 ~~k~~~l~~m~f~i~f~y~~l-----R~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~~~ 96 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYTIL-----RDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYIII 96 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----HHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHH
Confidence 455666766666665544322 2223322 12344444443322 224456677789999998 9999998887
Q ss_pred HHHHHHHHHHHHHhhhcc---cCCC-CCCCcCcccccCccchhh-------HHHHHHHHHHHHccccccc-chhcccccc
Q 008182 100 AVQTLGTGMLAMVTKLRQ---LRPR-PCKETATHTCEQASGFQM-------GVLYIALYLIALGTGGLKS-SVSGFGTDQ 167 (575)
Q Consensus 100 ~~~~~~~~l~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~g~g~g~~~~-~~~~~~~~~ 167 (575)
..+.....+.++.- +|. +++. .++..+.+ .+..-.. |.+.+..+..-+=.....+ .-.++..|.
T Consensus 97 ~~F~~fF~~f~~vl-yP~~~~lhp~~~~~~~~~~---~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~i 172 (491)
T PF03219_consen 97 IPFLGFFALFAFVL-YPNRDILHPDAFADKLLAI---LPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEI 172 (491)
T ss_pred HHHHHHHHHHHHHH-hhchhhcCCCHHHHHhhhh---ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77766666555542 122 2221 11110000 1111110 0010111111111111122 346788888
Q ss_pred CCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcc
Q 008182 168 FDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD 206 (575)
Q Consensus 168 ~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~ 206 (575)
++.++ -.+.++++..+.|+|..++..+..++.+
T Consensus 173 tt~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 173 TTVEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred CCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888 7899999999999999999888888876
No 270
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=94.02 E-value=10 Score=40.78 Aligned_cols=63 Identities=17% Similarity=0.119 Sum_probs=53.0
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 008182 446 FLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVT 508 (575)
Q Consensus 446 ~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~ 508 (575)
..++..+++..+.....+.+..++.++++.+.+-||+|.+.|..+++|+..-..++-.+.+..
T Consensus 406 ~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 406 LLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 345667888899999999999999999999999999999999999999887776665555433
No 271
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.59 E-value=12 Score=40.09 Aligned_cols=59 Identities=12% Similarity=0.158 Sum_probs=50.3
Q ss_pred eehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008182 444 SVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVA 502 (575)
Q Consensus 444 ~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~ 502 (575)
+-++.++..+++|+..+......+.+..+.++++.|..+..+..+.-.+|-..|+.+.-
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566777999999999999999999999999999999999998888888888877643
No 272
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=93.54 E-value=0.63 Score=49.90 Aligned_cols=113 Identities=21% Similarity=0.250 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccC---CcchhHHH
Q 008182 406 MAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKS---PKGMKTMS 482 (575)
Q Consensus 406 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~---P~~~rg~~ 482 (575)
+.+|.++..++.+.++..... ..+.....+..++..+|..+.....-+.+.|.. |.+ +|..
T Consensus 62 ~~i~~~~~~~~~~~~~~~~~~---------------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~l 125 (433)
T PF03092_consen 62 MIIGWLLGAVSALVLALLPAS---------------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES-RGDL 125 (433)
T ss_pred HHHHHHHHHHHHHHHHhcccc---------------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHH
Confidence 677777776666666655221 123334455666677778877776666666555 555 8899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhhh
Q 008182 483 TGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVW 550 (575)
Q Consensus 483 ~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~ 550 (575)
++.....+.+|+.++..+.|.+.+..+ .+..|.+.+.+..+..+..+++..+
T Consensus 126 qS~~~~~~~~G~lv~~~l~G~l~~~~~----------------~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 126 QSFVWGVRSVGSLVGSLLSGPLLDSFG----------------PQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhcCC----------------CeEEehHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999988764322 1233555566666665555555554
No 273
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=93.34 E-value=0.28 Score=51.65 Aligned_cols=166 Identities=11% Similarity=0.073 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcccchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCc
Q 008182 323 VARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTN 402 (575)
Q Consensus 323 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~ 402 (575)
++......+..-+.|..-.++.+.+.+. ..... ...+.+....++..++.+|+.+...|+-.-|+++||
T Consensus 34 li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvph------k~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRR---- 102 (498)
T KOG0637|consen 34 LISVASIAAGVQFGWALELSYLTPYLQS-LGVPH------KWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRR---- 102 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCc------ccccccccccccccceeccccccccccccccccccc----
Confidence 3333344444455555544444444332 12211 123445667788888999999999888877766542
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHH-
Q 008182 403 LQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTM- 481 (575)
Q Consensus 403 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~- 481 (575)
.-+.++....+++++++++..+....-.+.+. .+.-+......++.+.++-++....+.+.-++..+..-.+.|-+
T Consensus 103 -PfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~--~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~ 179 (498)
T KOG0637|consen 103 -PFILAGSLLIAVSLFLIGYAADIGLLLGDNER--KPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTR 179 (498)
T ss_pred -chHHHhhHHHHHHHhhhhhHhhhhHHhcCCcc--cccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhc
Confidence 12677888888888888776443221111111 11223445556778888888888888889999998887777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 008182 482 STGLFLTTLSLGFFVSSFLVA 502 (575)
Q Consensus 482 ~~g~~~~~~~lg~~lg~~l~~ 502 (575)
+++++.+..++|+.+|-++.+
T Consensus 180 Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 180 ANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred cchhHHHHHHhcceeeeeccc
Confidence 999999999999999966554
No 274
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=92.48 E-value=1.5 Score=39.69 Aligned_cols=62 Identities=19% Similarity=0.373 Sum_probs=53.4
Q ss_pred eehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008182 444 SVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVK 505 (575)
Q Consensus 444 ~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~ 505 (575)
+.+.+++.-++.|++.++..++.-.++.+...++.+++..++.......+..+|..+.-.+.
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567888999999999999999999999999999999999998888888888877765543
No 275
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.42 E-value=1.9 Score=46.12 Aligned_cols=133 Identities=15% Similarity=0.090 Sum_probs=81.9
Q ss_pred cCCCCchhhHHHH-HHHHHHHHHHHHHHHHHhhcc--cchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccc
Q 008182 55 TMHLPSATSANIV-TDFMGTSFLLCLLGGFLADTF--LGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTC 131 (575)
Q Consensus 55 ~l~~~~~~~~~~~-~~~~~~~~~~~~~~G~laDr~--~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 131 (575)
+++.+....-.+. .....+..++..+.+.+++|. .||++++.++..+..++.++.-++. |. |..-+++.
T Consensus 272 ~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~--p~------dap~~~t~ 343 (461)
T KOG3098|consen 272 KLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSF--PN------DAPLRPTD 343 (461)
T ss_pred hccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccc--cc------cCCCCCCc
Confidence 4444444333222 233455555666667776553 3899999999999999888776652 32 22112222
Q ss_pred cCc--cchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHh
Q 008182 132 EQA--SGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 202 (575)
Q Consensus 132 ~~~--~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~ 202 (575)
+.+ .........+.-++.|++-++.......++++..| ++ |..+++++-.-..++..++.....
T Consensus 344 ~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~-~~------~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 344 SPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP-DD------RAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred ccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc-Cc------hHHHHHHHHHHHHHHHHHHhhhhh
Confidence 222 11223445555678899999999999999999994 45 677777766666666665544433
No 276
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.50 E-value=1.5 Score=43.07 Aligned_cols=142 Identities=18% Similarity=0.150 Sum_probs=92.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccchH--HHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhh
Q 008182 62 TSANIVTDFMGTSFLLCLLGGFLADTFLGRY--KTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQM 139 (575)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (575)
.-|.+.+.|.+++.+++-+...+..|- ..| ..+.+.+.+..... ++.+.++. .+|+.+..
T Consensus 283 PhGfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs~a~l-~Lpilt~~----------------vsP~kes~ 344 (454)
T KOG4332|consen 283 PHGFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVSIAAL-LLPILTSS----------------VSPSKESP 344 (454)
T ss_pred CchhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHHHHHH-HHHHHHhc----------------cCCCcCCc
Confidence 457788888888888877777776654 221 23444444333332 22222221 23444555
Q ss_pred HHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHH
Q 008182 140 GVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSV 219 (575)
Q Consensus 140 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~ 219 (575)
..-+++..++-.+.|.++|...-+=+...|++. |...+.++..-.|+-..++-..----....+-|..|-++.+
T Consensus 345 ~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~ 418 (454)
T KOG4332|consen 345 SESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSA 418 (454)
T ss_pred hHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhhhhHH
Confidence 566777778888899999999999899999988 99999999888887766553221111112345788888888
Q ss_pred HHHHHHHH
Q 008182 220 AMFMAIII 227 (575)
Q Consensus 220 ~~~~~~~~ 227 (575)
...++.+.
T Consensus 419 ~~~~a~i~ 426 (454)
T KOG4332|consen 419 FLFVASIL 426 (454)
T ss_pred HHHHHHHH
Confidence 77777554
No 277
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=88.70 E-value=38 Score=36.47 Aligned_cols=161 Identities=12% Similarity=0.065 Sum_probs=98.5
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCC---CCchhhHHHHHHHHH-HHHHHHHHHHHHhhcccchHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMH---LPSATSANIVTDFMG-TSFLLCLLGGFLADTFLGRYKTIAIFA 99 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~---~~~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Gr~~~~~~~~ 99 (575)
++.+..+.+..+|..+.++.+. -+++.+. .++....++-....+ ...+..++-+++.+++ -|.+++.+.+
T Consensus 26 ~~kflpl~Ll~f~I~~ny~~lR-----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~~~ 99 (509)
T COG3202 26 LKKFLPLALLFFCILFNYNLLR-----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYIIL 99 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHHHH
Confidence 4556667777777766554332 2244333 345555566666655 6677888999999998 9999999988
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCCCCcCccc--------ccCccc----------hhhHHHHHHHHHHHHccccccc-ch
Q 008182 100 AVQTLGTGMLAMVTKLRQLRPRPCKETATHT--------CEQASG----------FQMGVLYIALYLIALGTGGLKS-SV 160 (575)
Q Consensus 100 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~----------~~~~~~~~~~~l~g~g~g~~~~-~~ 160 (575)
..+....+++++.-- | +.+--|.. .+.|.. .....+++ ..-+=...+.. .-
T Consensus 100 ~~F~~fF~LFa~Vi~-P------~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi---~aELWgslV~S~lF 169 (509)
T COG3202 100 GFFLGFFALFAFVIY-P------YKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYI---MAELWGSLVLSLLF 169 (509)
T ss_pred HHHHHHHHHHHHHHh-c------cccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHH---HHHHHHHHHHHHHH
Confidence 888888888877622 2 22211111 112211 01111111 11111111111 33
Q ss_pred hccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcc
Q 008182 161 SGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD 206 (575)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~ 206 (575)
..+..|..+.++ -.|.++.++...|++..++..+..++.+
T Consensus 170 w~faNeitt~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 170 WQFANEITTIEE------AKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHhhhHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 566778777777 7899999999999999999988888866
No 278
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=87.28 E-value=30 Score=37.43 Aligned_cols=59 Identities=8% Similarity=-0.002 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHhhh-hhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008182 449 IPQFFLVGAGEAFIYT-GQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKV 507 (575)
Q Consensus 449 i~~~~l~g~g~~~~~~-~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~ 507 (575)
...|+...+-..++.. ..|.++.|....++-.+..++.....++|..+++.+...+.+.
T Consensus 132 ~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~ 191 (472)
T TIGR00769 132 ALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKL 191 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455555555555554 8899999999999999999999999999999999998877643
No 279
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=85.42 E-value=49 Score=34.23 Aligned_cols=109 Identities=11% Similarity=0.014 Sum_probs=61.0
Q ss_pred cccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccee
Q 008182 366 GSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSV 445 (575)
Q Consensus 366 ~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (575)
+.+.........+++++.+.+.|+..||+. -++-.++.++++++-. ..+.
T Consensus 72 a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~----------cl~~cily~~scl~k~--------------------~~~~ 121 (354)
T PF05631_consen 72 AILFVAGFASSAIFGTFVGSLADRYGRKKA----------CLLFCILYSLSCLTKH--------------------SSNY 121 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHH----------HHHHHHHHHHHHHHHh--------------------cccc
Confidence 344555667777888888888777776632 2333333344433211 2345
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhheec-----ccCCcchhHHHHHHHH-HHHHHHHHHHHHHHHhh
Q 008182 446 FLLIPQFFLVGAGEAFIYTGQLDFFI-----TKSPKGMKTMSTGLFL-TTLSLGFFVSSFLVAVV 504 (575)
Q Consensus 446 ~~li~~~~l~g~g~~~~~~~~~~~~~-----~~~P~~~rg~~~g~~~-~~~~lg~~lg~~l~~~v 504 (575)
..+++.=++.|++..+.+...=++.. +..|++..+.-.+... +.+++-.+.++.++..+
T Consensus 122 ~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l 186 (354)
T PF05631_consen 122 PVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVL 186 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 56778889999999988876555543 3345554444333333 22334444444444443
No 280
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=84.64 E-value=6.4 Score=41.46 Aligned_cols=60 Identities=13% Similarity=0.127 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhh
Q 008182 139 MGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYI 204 (575)
Q Consensus 139 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l 204 (575)
.+..++..+..|+..|....+....+.+..++++ |.-.++...++-++|..++..++-++
T Consensus 335 i~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 335 IWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4555556667788888888888888998888777 99999999999899999888776554
No 281
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=84.53 E-value=13 Score=37.88 Aligned_cols=116 Identities=12% Similarity=-0.004 Sum_probs=68.1
Q ss_pred CCCcchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Q 008182 21 TGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAA 100 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~ 100 (575)
+...|.++++... +...+..|.=..++.+....++| +...+. .+..-...+++.+.+..++ |-|.++.++..
T Consensus 25 ~~~~knv~i~s~~-fl~~f~a~~gl~nlq~~vn~~lg--~~sl~~----~y~~l~~s~m~~~~~Ir~~-g~K~tm~lav~ 96 (390)
T KOG3097|consen 25 LGILKNVLILSIA-FLLTFTAYLGLQNLQTSVNYDLG--TVSLGA----LYLSLIDSSMFMPLLIRFL-GTKWTMVLAVF 96 (390)
T ss_pred cchhhhhhHHHHH-HHHHHHHHHHHHHHHHHHhcCcc--cchhhh----hhHHHHHHHHHHHHHHHHH-hhHHHHHHHHH
Confidence 3444566655543 33444444444566666555443 222222 2333344455555666665 99999988876
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCC
Q 008182 101 VQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFD 169 (575)
Q Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 169 (575)
.+.... +.++ . +.+..++-+-.+.|+|.+..+.+-.+++++.-+
T Consensus 97 ~Y~lyi-----A~Nl---~-----------------pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 97 PYALYI-----AANL---E-----------------PRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHHHH-----Hhhc---c-----------------hhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 665532 2221 1 124456777788999999999988888887654
No 282
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=84.37 E-value=28 Score=35.30 Aligned_cols=47 Identities=13% Similarity=0.235 Sum_probs=33.1
Q ss_pred HHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008182 456 GAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVA 502 (575)
Q Consensus 456 g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~ 502 (575)
|+-.+..+...+--+.+..+++.|-.+|+...+.-++|-.+.+.++-
T Consensus 353 GLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 353 GLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred hhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 44344444445555666778889999999998888888877766654
No 283
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=81.99 E-value=29 Score=34.23 Aligned_cols=57 Identities=11% Similarity=0.132 Sum_probs=38.2
Q ss_pred hhhhhhhhhhhHHHhHHHHHHH--Hh-hhcc--cccchhHHHHHHHHHHHHHHHHHhcCccc
Q 008182 179 MAYFFSRFFFFISLGTLMAVTV--LV-YIQD--EISRSVGYGICSVAMFMAIIIFLAGTKRY 235 (575)
Q Consensus 179 r~~~~~~~~~~~~ig~~l~~~i--~~-~l~~--~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 235 (575)
|+.......++.++|.+++... .+ -..+ .-.|++++.+.+++.++-++++.+.-++.
T Consensus 4 K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~f 65 (267)
T PF07672_consen 4 KSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNF 65 (267)
T ss_pred cceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 6677777777888888877332 22 1111 12499999888888877777777766654
No 284
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=80.50 E-value=26 Score=36.18 Aligned_cols=95 Identities=11% Similarity=0.084 Sum_probs=57.7
Q ss_pred ceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCCc
Q 008182 443 VSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNIN 522 (575)
Q Consensus 443 ~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~ 522 (575)
-++++..+.++++..-..+.-+....-+++....+.-|...|++++..-+=..+-.++ +.+..+ +.-.+.
T Consensus 324 ~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g-------~~L~ir 393 (433)
T KOG3810|consen 324 QHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSILTLI---VVDDRG-------LGLDIR 393 (433)
T ss_pred cceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEE---EEcccc-------cCCCcc
Confidence 4677788899999888888887777777777778888888998886644333332222 222111 111111
Q ss_pred cc--chhHHHHHHHHHHHHHHHHHHhh
Q 008182 523 RG--RLDLFYGLLAILSIINLVIYLIC 547 (575)
Q Consensus 523 ~~--~~~~~f~~~a~l~~v~~~~~~~~ 547 (575)
.+ -+..+|.+++++.++.....+..
T Consensus 394 ~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 394 TQFVVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred eeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence 11 13344677777777766554333
No 285
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=78.48 E-value=14 Score=39.61 Aligned_cols=58 Identities=16% Similarity=0.189 Sum_probs=43.2
Q ss_pred hhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHH
Q 008182 138 QMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 201 (575)
Q Consensus 138 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~ 201 (575)
+.+..++..+++|+.+|-.......+..+..++++ |..+-.+...+.++|-.+|..++
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566677889999999888888787888777665 77776677777777777776543
No 286
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=77.01 E-value=25 Score=33.94 Aligned_cols=62 Identities=18% Similarity=0.225 Sum_probs=48.5
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhheecccCCc-chhHHHHHHHHH-HHHHHHHHHHHHHHhhhhh
Q 008182 446 FLLIPQFFLVGAGEAFIYTGQLDFFITKSPK-GMKTMSTGLFLT-TLSLGFFVSSFLVAVVKKV 507 (575)
Q Consensus 446 ~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~-~~rg~~~g~~~~-~~~lg~~lg~~l~~~v~~~ 507 (575)
..++...+..+++.+...+....++.+..|+ +.|+...+.... ...+|..+++.+.+.+...
T Consensus 95 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 95 ALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555558888888999999999999998 678888888888 5778888888777766543
No 287
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=74.94 E-value=38 Score=35.84 Aligned_cols=124 Identities=12% Similarity=0.013 Sum_probs=78.3
Q ss_pred HHHHHHHhhHHHHHHHhhhc--CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHh
Q 008182 36 CERLSTMGIAVNLVTYLVGT--MHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVT 113 (575)
Q Consensus 36 ~~~~~~~~~~~~l~~yl~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~ 113 (575)
+...+++-+..+......+. -+-...-.|.+-.+..+.+.++.+..|++..++ .+..-+.++......+..+..++.
T Consensus 258 ~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w-~~~~~l~l~~~S~l~a~~L~lm~~ 336 (412)
T PF01770_consen 258 FATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNW-DRWGELALGVFSLLQAGLLFLMSF 336 (412)
T ss_pred HHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcch-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444433333322 244455667788888888999999999997776 776666555544444444443332
Q ss_pred hhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhh
Q 008182 114 KLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFF 188 (575)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 188 (575)
+ .+.+..+++.++.........+....-++....++. -+..||+..+
T Consensus 337 t----------------------~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~------yaLVFGiNtf 383 (412)
T PF01770_consen 337 T----------------------GNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEER------YALVFGINTF 383 (412)
T ss_pred h----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc------eeeeeeeHHH
Confidence 2 357888888888877777777777777777777666 6666666443
No 288
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=67.44 E-value=67 Score=33.25 Aligned_cols=125 Identities=8% Similarity=0.005 Sum_probs=76.8
Q ss_pred HHHHHHHHhhHHHHHHHhhhcC-CCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHh
Q 008182 35 LCERLSTMGIAVNLVTYLVGTM-HLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVT 113 (575)
Q Consensus 35 ~~~~~~~~~~~~~l~~yl~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~ 113 (575)
.+.+.++|-++.+.....++.- +-...--|..=.+..+.++++.+..|.+--++ .|..-++++......+-.+..++.
T Consensus 244 Al~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~~ 322 (433)
T KOG3810|consen 244 ALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMAQ 322 (433)
T ss_pred HHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhhc
Confidence 3444555555444444333321 11112234444556777788889999998776 676555555544344444444442
Q ss_pred hhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhh
Q 008182 114 KLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFF 188 (575)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 188 (575)
+ .+.+..+++.++...-.....+....-++...+.+. -|..||+...
T Consensus 323 t----------------------~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~------~gLvFGiNTF 369 (433)
T KOG3810|consen 323 T----------------------QHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSEL------FGLVFGINTF 369 (433)
T ss_pred c----------------------cceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhh------heeeeehHHH
Confidence 2 237778888888888888877877777888887777 7777777544
No 289
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=63.94 E-value=22 Score=29.67 Aligned_cols=37 Identities=19% Similarity=0.084 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 65 NIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 65 ~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
.-++.-++...+.....||+.||+.|-++-.+|.+++
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 3344455666677778899999998988865555443
No 290
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=61.52 E-value=1.7e+02 Score=30.89 Aligned_cols=35 Identities=9% Similarity=0.043 Sum_probs=24.6
Q ss_pred eehhhHHHHHHHHHHHHHhhhhhhheecccCCcchh
Q 008182 444 SVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMK 479 (575)
Q Consensus 444 ~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~r 479 (575)
.....+...++.+.+.+..+...+..... .|++..
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~yt 150 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYT 150 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHH
Confidence 33445667788888888888888888774 455543
No 291
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=61.49 E-value=2.5e+02 Score=30.67 Aligned_cols=43 Identities=14% Similarity=0.005 Sum_probs=38.3
Q ss_pred hhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008182 464 TGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKK 506 (575)
Q Consensus 464 ~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~ 506 (575)
-..|.++.+..+.++-.+.-++.....++|..+++.+...+.+
T Consensus 163 lLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 163 LLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3569999999999999999999999999999999999888765
No 292
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=53.58 E-value=19 Score=35.43 Aligned_cols=64 Identities=14% Similarity=0.099 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHH---------hhcccchHHHH
Q 008182 30 VLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFL---------ADTFLGRYKTI 95 (575)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~l---------aDr~~Gr~~~~ 95 (575)
--...+.+.++...+.+++..|++ +.|+++...+.++.+-.+.-++..++.|.+ -||+ |||+..
T Consensus 22 yGvGHmlNDitAScWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~w 94 (412)
T KOG4830|consen 22 YGVGHMLNDITASCWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMSW 94 (412)
T ss_pred echhHHHhhHHHHHHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceeee
Confidence 445677788888888899999988 568899888899999999999999998744 5788 998753
No 293
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=52.42 E-value=58 Score=23.50 Aligned_cols=34 Identities=15% Similarity=0.291 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 68 TDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 68 ~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
+.......+.....|+..|+.+|.++...+..++
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~l 40 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLL 40 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 4455566677788999999988986655544433
No 294
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=51.97 E-value=60 Score=29.19 Aligned_cols=90 Identities=13% Similarity=0.214 Sum_probs=49.5
Q ss_pred HHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhc
Q 008182 83 FLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSG 162 (575)
Q Consensus 83 ~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~ 162 (575)
.++||. .||+.+.+.+=.++|...+...-.+-. ...-|.| .+..++....++|+|.- ...+.
T Consensus 56 ~Vs~RM--~rRm~~~~GiP~~lG~~~f~~~y~l~~----------~~~~dvP---~~~~~~~S~~~Fg~gll---GisYG 117 (153)
T PF11947_consen 56 VVSNRM--LRRMAVFVGIPTALGVAVFVVFYYLKS----------RQIVDVP---PWAVLLVSLVFFGLGLL---GISYG 117 (153)
T ss_pred HHHHHH--HHHHHHHhchHHHHHHHHHHHHHHHHh----------ccccccC---chHHHHHHHHHHHHHHH---hhhhh
Confidence 467887 455555555555555443333211111 1111122 23444444444554432 34566
Q ss_pred cccccCCCCChHhhhhhhhhhhhhhhhHHHhHHH
Q 008182 163 FGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLM 196 (575)
Q Consensus 163 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l 196 (575)
+++...++++ -|+.+|+-.+-.|++-+.
T Consensus 118 ilSaSWD~~r------~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 118 ILSASWDPER------EGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hcccccCCCC------CCCcccHHHHHHhHHHHH
Confidence 6777888887 799999988888877653
No 295
>PRK03612 spermidine synthase; Provisional
Probab=50.47 E-value=2.1e+02 Score=31.44 Aligned_cols=66 Identities=11% Similarity=-0.151 Sum_probs=29.7
Q ss_pred CcchhHHHHHHHHHHHHHHHhhHHH-HHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008182 23 GWVPAALVLGIELCERLSTMGIAVN-LVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF 88 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~-l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~ 88 (575)
+.+.+....++..+..+.+=.+..- +..++-...-.-....+..+....+++.++.-+.....+++
T Consensus 15 ~~~~l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~ 81 (521)
T PRK03612 15 DRALLLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF 81 (521)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 4555555555555555555444333 33222222222233444444445555555544444444444
No 296
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=48.49 E-value=2.1e+02 Score=30.23 Aligned_cols=92 Identities=11% Similarity=0.120 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccC-----CCcccc
Q 008182 451 QFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLAD-----NINRGR 525 (575)
Q Consensus 451 ~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~-----~~~~~~ 525 (575)
.++++-+..+.-..+.-.++..+..++.-|-++.+....+..|.+++..+.-.+.+ ++.+.+ ..+++.
T Consensus 139 ~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s-------~dF~N~y~rs~P~~~g~ 211 (510)
T KOG3574|consen 139 LFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALES-------PDFCNTYLRSIPLDQGF 211 (510)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecC-------hhhhhHHHhcCcCccce
Confidence 34444444444444444445555666777777777777777777776554433221 011000 112222
Q ss_pred --hhHHHHHHHHHHHHHHHHHHhhhh
Q 008182 526 --LDLFYGLLAILSIINLVIYLICAV 549 (575)
Q Consensus 526 --~~~~f~~~a~l~~v~~~~~~~~~~ 549 (575)
...++++.+.+.+++.....++.+
T Consensus 212 ItL~gy~~fwg~~~~vat~Lv~~~kk 237 (510)
T KOG3574|consen 212 ITLAGYLWFWGALFIVATTLVALLKK 237 (510)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 345566777777776665555533
No 297
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=43.24 E-value=7.5 Score=39.50 Aligned_cols=58 Identities=16% Similarity=0.234 Sum_probs=3.4
Q ss_pred hhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHH
Q 008182 138 QMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 201 (575)
Q Consensus 138 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~ 201 (575)
+.+..++..+++|+.+|-.......+..+..++++ |..+-.+...+.++|-.+|..++
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --------------------HHHH----------------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777888999999988888888888888776 66666666666777777766443
No 298
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=42.68 E-value=94 Score=30.61 Aligned_cols=28 Identities=14% Similarity=0.062 Sum_probs=16.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 008182 476 KGMKTMSTGLFLTTLSLGFFVSSFLVAV 503 (575)
Q Consensus 476 ~~~rg~~~g~~~~~~~lg~~lg~~l~~~ 503 (575)
+-+|..++|+-.+.-+..+.+.++..+.
T Consensus 74 pii~~iGLglg~liW~s~n~l~Gw~~gr 101 (254)
T PF07857_consen 74 PIIKTIGLGLGMLIWGSVNCLTGWASGR 101 (254)
T ss_pred hHhhhhhhHHHHHHHHHHHHHHHHHHhh
Confidence 4566666666655555555555566654
No 299
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=41.64 E-value=1.9e+02 Score=31.53 Aligned_cols=36 Identities=11% Similarity=0.077 Sum_probs=26.6
Q ss_pred ecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008182 470 FITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVK 505 (575)
Q Consensus 470 ~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~ 505 (575)
+.....++.++-++.++...+.+|.+++-.+.-.+.
T Consensus 143 ALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 143 ALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred hhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhC
Confidence 344556788999999988888888888766655443
No 300
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=36.01 E-value=1.3e+02 Score=25.07 Aligned_cols=32 Identities=13% Similarity=0.046 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 008182 70 FMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 101 (575)
Q Consensus 70 ~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 101 (575)
..+...+...+.|...|+.+|-++.+.+.+++
T Consensus 51 ~~v~pil~G~~lG~WLD~~~~t~~~~tl~~ll 82 (100)
T TIGR02230 51 SVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLI 82 (100)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 34445566777888889877866655444433
No 301
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.78 E-value=2e+02 Score=24.19 Aligned_cols=34 Identities=6% Similarity=-0.009 Sum_probs=27.4
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 008182 475 PKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVT 508 (575)
Q Consensus 475 P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~ 508 (575)
.++.++.++++-...-.+++.+-++..|++.+.+
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3567888888888888888888888888887644
No 302
>COG2119 Predicted membrane protein [Function unknown]
Probab=30.47 E-value=4.3e+02 Score=24.60 Aligned_cols=36 Identities=22% Similarity=0.147 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 008182 69 DFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 105 (575)
Q Consensus 69 ~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~ 105 (575)
.-.+.+.++...+.++++|+ -.|.+-.++.+++.+.
T Consensus 142 g~~l~s~laVl~G~~ia~ki-~~r~l~~~aallFl~f 177 (190)
T COG2119 142 GMILASVLAVLLGKLIAGKL-PERLLRFIAALLFLIF 177 (190)
T ss_pred HHHHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHH
Confidence 34566778888899999998 8787777766555443
No 303
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=27.89 E-value=3.7e+02 Score=22.60 Aligned_cols=50 Identities=22% Similarity=0.241 Sum_probs=40.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHH
Q 008182 60 SATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLA 110 (575)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~ 110 (575)
+...|-+...|...+.+.+++.+|..|+. -+-+-=.++..+..+|..+..
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~-~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGV-RPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCc-CCChHHHHhHHHHHHhHHheE
Confidence 46778899999999999999999999998 777766777777777655443
No 304
>PF01891 CbiM: Cobalt uptake substrate-specific transmembrane region; InterPro: IPR002751 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the integral membrane protein CbiM, which is involved in cobalamin synthesis, although its exact function in unknown.; GO: 0009236 cobalamin biosynthetic process, 0016021 integral to membrane
Probab=26.09 E-value=4.3e+02 Score=24.84 Aligned_cols=30 Identities=20% Similarity=0.403 Sum_probs=21.4
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhheecccCC
Q 008182 446 FLLIPQFFLVGAGEAFIYTGQLDFFITKSP 475 (575)
Q Consensus 446 ~~li~~~~l~g~g~~~~~~~~~~~~~~~~P 475 (575)
......+..+++.|++.+....++....-|
T Consensus 174 ~~~~~~~~~l~~~Eg~ltg~~v~~l~~~rP 203 (205)
T PF01891_consen 174 QAYLPSHLLLAFPEGFLTGMVVTFLVVYRP 203 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 345567788899999988777766655444
No 305
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=25.56 E-value=5.6e+02 Score=23.97 Aligned_cols=36 Identities=6% Similarity=0.124 Sum_probs=19.3
Q ss_pred hhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHH
Q 008182 186 FFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMF 222 (575)
Q Consensus 186 ~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~ 222 (575)
.+...-++..+|..+++++.+..+. ...+++.+..+
T Consensus 167 ~~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~l~ 202 (209)
T PF06912_consen 167 RYLLIILSFFIGAILGALLYRRLGF-WALLLPALLLL 202 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHH
Confidence 3344455566666666677666663 44444444433
No 306
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=25.46 E-value=36 Score=29.65 Aligned_cols=16 Identities=0% Similarity=-0.124 Sum_probs=6.9
Q ss_pred hhHHHHHHHHHHHHHH
Q 008182 211 SVGYGICSVAMFMAII 226 (575)
Q Consensus 211 ~~~f~~~~~~~~~~~~ 226 (575)
||++++.+++.++.++
T Consensus 1 RW~l~~iii~~i~l~~ 16 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFL 16 (130)
T ss_pred CeeeHHHHHHHHHHHH
Confidence 3555544444333333
No 307
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=22.87 E-value=1.1e+02 Score=34.03 Aligned_cols=68 Identities=10% Similarity=0.028 Sum_probs=54.7
Q ss_pred cchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhhhhhHHHhHHHHHHHHhhhcccc
Q 008182 135 SGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEI 208 (575)
Q Consensus 135 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~i~~~l~~~~ 208 (575)
..-+..+.+--.+++|++.........=+-=+++|++- |+.+.+++.....+|..+...+...+....
T Consensus 454 ~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sM------kS~~~al~l~t~a~G~~lss~Lv~~v~~~t 521 (571)
T KOG1237|consen 454 NPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESM------KSVATALWLLTVAVGNYLSSVLVSLVQFST 521 (571)
T ss_pred CCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44556777788889999998877666667777888888 999999999999999999988886665544
No 308
>PF12832 MFS_1_like: MFS_1 like family
Probab=21.80 E-value=1.8e+02 Score=22.57 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=21.6
Q ss_pred ccccccchhHHHHHHHHHHhHHHhhhhhh
Q 008182 365 AGSLTVFFVSAILITLAVYDRLIMPLWKK 393 (575)
Q Consensus 365 ~~~~~~~~~~~~~i~~~l~~~~~~~l~~r 393 (575)
.+.+..+..+..++..|+++.+.|+..++
T Consensus 37 iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 37 IGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 34567777888888899998887666554
No 309
>PF11990 DUF3487: Protein of unknown function (DUF3487); InterPro: IPR021877 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 121 to 136 amino acids in length. This protein has a conserved RLN sequence motif.
Probab=21.23 E-value=3.7e+02 Score=23.13 Aligned_cols=41 Identities=12% Similarity=-0.073 Sum_probs=29.9
Q ss_pred HHHHHHhhhc----CCCCchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 008182 46 VNLVTYLVGT----MHLPSATSANIVTDFMGTSFLLCLLGGFLAD 86 (575)
Q Consensus 46 ~~l~~yl~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD 86 (575)
.++|.-+.++ .|++..|..++..+..+...+..++..++..
T Consensus 5 ~fLp~RLN~ePvV~rGlT~~El~~~a~~~~~~g~~~gl~la~~~g 49 (121)
T PF11990_consen 5 EFLPDRLNREPVVFRGLTADELGLAAGVGFVAGLVVGLPLALLTG 49 (121)
T ss_pred ccchhhhcCCCCeecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666654 6899999988888877777777777666644
No 310
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=21.18 E-value=8.2e+02 Score=24.31 Aligned_cols=25 Identities=16% Similarity=0.436 Sum_probs=17.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHH
Q 008182 401 TNLQRMAIGLVLSIVGMAAAALVER 425 (575)
Q Consensus 401 ~~~~~~~~g~~~~~~~~~~~~~~~~ 425 (575)
...++-....++..+++..+.....
T Consensus 134 ~~~~kgi~~Ll~stigy~~Y~~~~~ 158 (269)
T PF06800_consen 134 SNMKKGILALLISTIGYWIYSVIPK 158 (269)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHH
Confidence 3455566678888888888776644
Done!