Query 008182
Match_columns 575
No_of_seqs 177 out of 2586
Neff 8.8
Searched_HMMs 13730
Date Mon Mar 25 20:06:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008182.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/008182hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pw4a_ f.38.1.1 (A:) Glycerol 99.9 2.3E-26 1.7E-30 240.9 28.0 179 27-233 23-205 (447)
2 d1pv7a_ f.38.1.2 (A:) Lactose 99.9 8.1E-24 5.9E-28 216.9 23.1 397 24-551 6-403 (417)
3 d1pw4a_ f.38.1.1 (A:) Glycerol 99.3 2.7E-12 2E-16 132.5 12.4 180 25-230 249-429 (447)
4 d1pv7a_ f.38.1.2 (A:) Lactose 99.2 1.1E-11 7.7E-16 125.3 9.6 150 53-233 251-401 (417)
5 d3b45a1 f.51.1.1 (A:91-270) Gl 4.2 5.4E+02 0.039 19.7 5.4 36 73-108 63-98 (180)
6 d3proc1 d.52.1.1 (C:6-85) Alph 4.2 5.7E+02 0.041 17.4 5.0 41 48-88 3-43 (80)
7 d2qkwa1 a.8.8.1 (A:29-129) Avi 3.3 3.3E+02 0.024 18.3 2.4 26 466-491 25-50 (101)
8 d1fftb2 f.17.2.1 (B:27-117) Cy 3.3 1.9E+02 0.014 20.3 1.2 8 546-553 38-45 (91)
9 d2nr9a1 f.51.1.1 (A:4-192) Glp 3.2 7.4E+02 0.054 19.0 5.4 39 73-111 65-103 (189)
10 d3b60a2 f.37.1.1 (A:10-328) Mu 3.1 8.2E+02 0.06 19.6 6.1 13 208-220 154-166 (319)
No 1
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=99.95 E-value=2.3e-26 Score=240.86 Aligned_cols=179 Identities=8% Similarity=-0.033 Sum_probs=144.9
Q ss_pred hHHHHHHHHHHHHHHHh---hHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 27 AALVLGIELCERLSTMG---IAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 27 ~~~~~~~~~~~~~~~~~---~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
-|.++...++..+..|. ....+.+++. ++|++.+|.+++.+++.++..++++++|+++||+ |||+++.++.++.+
T Consensus 23 ~w~i~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~~~~ 100 (447)
T d1pw4a_ 23 RWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAA 100 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSHHHHHHHTT-SSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHH
Confidence 34444444444444442 2345667776 5899999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
++.++++++..... +...+++.|++.|++.+...+...++++|++|+++ |++++
T Consensus 101 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~ 154 (447)
T d1pw4a_ 101 AVMLFMGFVPWATS--------------------SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIV 154 (447)
T ss_dssp HHHHHHHHCHHHHS--------------------SSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTH------HHHHH
T ss_pred HHHhhccccchhhh--------------------hHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhc------ccccc
Confidence 99988887643221 36778999999999999999999999999999988 99999
Q ss_pred hhhhhhHHHhHHHHHHHHhhhccc-ccchhHHHHHHHHHHHHHHHHHhcCc
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDE-ISRSVGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~-~~~~~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
++.+.+.++|..++|.+++.+... .+|++.|++.+...++..++.+...+
T Consensus 155 ~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 205 (447)
T d1pw4a_ 155 SVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMR 205 (447)
T ss_dssp HHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCC
T ss_pred cccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHhcc
Confidence 999999999999999988876654 47999999887776665555544443
No 2
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=99.91 E-value=8.1e-24 Score=216.91 Aligned_cols=397 Identities=8% Similarity=-0.014 Sum_probs=233.0
Q ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 008182 24 WVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 103 (575)
-|.+|.+.+..++..+++....+.++.|+++++|+|.++.|++.+++.++..+++++.|+++||+ ||||+++++.....
T Consensus 6 n~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~-grr~~l~~~~~~~~ 84 (417)
T d1pv7a_ 6 NTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL-GLRKYLLWIITGML 84 (417)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH-TTCTHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHH
Confidence 35788888888888888888889999999999999999999999999999999999999999999 99999999999888
Q ss_pred HHHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhh
Q 008182 104 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 183 (575)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 183 (575)
++..+..+..+.+. .....++.+.+.+.+.+...........+..+++.. .+....
T Consensus 85 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 140 (417)
T d1pv7a_ 85 VMFAPFFIFIFGPL--------------------LQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSR----RSNFEF 140 (417)
T ss_dssp HTHHHHHHHTHHHH--------------------HHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHHH----HHSCCH
T ss_pred HHHHHHHHhhhhhh--------------------HHHHHHHHHHHhhhcccccccchhhcccccccchhh----hhHHHH
Confidence 88887777643221 111223334444444343333333333332222221 155666
Q ss_pred hhhhhhHHHhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHHhccccC
Q 008182 184 SRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDL 263 (575)
Q Consensus 184 ~~~~~~~~ig~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (575)
+........+..++|.+++.+.+. +|+..+........+..+...+..++.+..++++++..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 202 (417)
T d1pv7a_ 141 GRARMFGCVGWALGASIVGIMFTI-NNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVG----------------- 202 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHSSCCCSCSSSCSSHHHH-----------------
T ss_pred HHHhhhhccccccccccccccccc-cccccccchhhHHHHHHHHHHHHhcccccchhhhhhhh-----------------
Confidence 677778889999999999988774 55555555554444444444443332221111110000
Q ss_pred CCCccccccCCcccccccCCcchhhhhHHhhhhcCCcCCCCCCCCCccccchhhhhHHHHHHHHHHHHHHHHHHHhhhcc
Q 008182 264 PCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQM 343 (575)
Q Consensus 264 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 343 (575)
. ..+........... . ......... ...............
T Consensus 203 --------------~---~~~~~~~~~~~~~~-----------------~--~~~~~~~~~---~~~~~~~~~~~~~~~- 242 (417)
T d1pv7a_ 203 --------------A---NHSAFSLKLALELF-----------------R--QPKLWFLSL---YVIGVSCTYDVFDQQ- 242 (417)
T ss_dssp --------------S---CCCCCCHHHHHHHT-----------------T--SSHHHHHHH---HHHHHHHHHHHHHHH-
T ss_pred --------------h---hccccccccccccc-----------------c--cccccchhh---hhHHHHHHHHhhhcc-
Confidence 0 00000000000000 0 000111111 111111111111111
Q ss_pred cchhhhhhcccccccccccccccccccchhHHHHHHHHHHhHHHhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 008182 344 ITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALV 423 (575)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 423 (575)
...+... ..... ...............+...+...+.+++ .+|. ++.+.+..+.++.+++++.+..
T Consensus 243 ~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~r~------~~~~~~~~~~~~~~~~~~~~~~- 308 (417)
T d1pv7a_ 243 FANFFTS--FFATG-EQGTRVFGYVTTMGELLNASIMFFAPLI----INRI------GGKNALLLAGTIMSVRIIGSSF- 308 (417)
T ss_dssp HHHHHTT--SSSCH-HHHHHHHHHHHHHHHHHHHHHHTTHHHH----HHHH------CHHHHHHHHHHHHHHHHHHHHT-
T ss_pred ccccccc--ccccc-ccchhhhcccccccccccccchhhhhhh----hccc------ccccchhhhHHHHHHhhhcccc-
Confidence 0111000 00000 0000001112222333333333333433 4442 2334466777777777666654
Q ss_pred HHHHHHHHHhhCCCCCCccceehhhHHHHHHHHHHHHHhhhhhhheecccCCcchhHHHHHHH-HHHHHHHHHHHHHHHH
Q 008182 424 ERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLF-LTTLSLGFFVSSFLVA 502 (575)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~-~~~~~lg~~lg~~l~~ 502 (575)
..+.+.+++..++.+++.+...+...+++.+.+|++.||++.|+. ++...+|..+++.+.|
T Consensus 309 ------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G 370 (417)
T d1pv7a_ 309 ------------------ATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAG 370 (417)
T ss_dssp ------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred ------------------ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 235556677888899999999999999999999999999999975 5677899999999999
Q ss_pred hhhhhcCCCCCCCCccCCCcccchhHHHHHHHHHHHHHHHHHHhhhhhc
Q 008182 503 VVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWY 551 (575)
Q Consensus 503 ~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~ 551 (575)
.+.+..+ ....|++.+++.++..++.++..++.
T Consensus 371 ~l~~~~g----------------~~~~~~~~~~~~~~~~~~~~~~l~~~ 403 (417)
T d1pv7a_ 371 NMYESIG----------------FQGAYLVLGLVALGFTLISVFTLSGP 403 (417)
T ss_dssp HHHHHHC----------------HHHHHHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHC----------------HHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 8875432 35667888888887777776665543
No 3
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=99.32 E-value=2.7e-12 Score=132.50 Aligned_cols=180 Identities=17% Similarity=0.033 Sum_probs=139.7
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 008182 25 VPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~ 104 (575)
|.++.+....++.....++...+++.|+.+.++++..+.+.......+...++.+++|+++||+ +|++..........+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 327 (447)
T d1pw4a_ 249 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FRGNRGATGVFFMTL 327 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STTCHHHHHHHHHHH
T ss_pred chHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhc-cccccccccchhHHH
Confidence 5677777888888888899999999999999999999999999999999999999999999998 877655444443333
Q ss_pred HHHHHHHHhhhcccCCCCCCCcCcccccCccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhh
Q 008182 105 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 184 (575)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 184 (575)
...........+. .+.....+..++.|++.+...+....+..|.+|++. |+++.+
T Consensus 328 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g 382 (447)
T d1pw4a_ 328 VTIATIVYWMNPA-------------------GNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAG 382 (447)
T ss_dssp HHHHHHHTTSCCT-------------------TCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTH------HHHHHH
T ss_pred HHHHHHHHHhccc-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHH
Confidence 3222222111111 235566667777888888888888899999999888 999999
Q ss_pred hhhhhHHH-hHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHh
Q 008182 185 RFFFFISL-GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 230 (575)
Q Consensus 185 ~~~~~~~i-g~~l~~~i~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 230 (575)
+.+...++ |..++|.+.|++.+.+||+..|++.++..+++.++...
T Consensus 383 ~~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 429 (447)
T d1pw4a_ 383 FTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 429 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 98888777 45678999999999999999998877666665554433
No 4
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=99.21 E-value=1.1e-11 Score=125.30 Aligned_cols=150 Identities=11% Similarity=0.040 Sum_probs=125.1
Q ss_pred hhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcCccccc
Q 008182 53 VGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCE 132 (575)
Q Consensus 53 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 132 (575)
.++.+.+....+.......++..++.++.|++.||+ |||+.+.++.++.+++.++..+.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~------------------- 310 (417)
T d1pv7a_ 251 FATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRI-GGKNALLLAGTIMSVRIIGSSFAT------------------- 310 (417)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHTCC-------------------
T ss_pred ccccccchhhhcccccccccccccchhhhhhhhccc-ccccchhhhHHHHHHhhhcccccc-------------------
Confidence 334455666777888888889999999999999999 999999999999888888777652
Q ss_pred CccchhhHHHHHHHHHHHHcccccccchhccccccCCCCChHhhhhhhhhhhhh-hhhHHHhHHHHHHHHhhhcccccch
Q 008182 133 QASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRF-FFFISLGTLMAVTVLVYIQDEISRS 211 (575)
Q Consensus 133 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~ig~~l~~~i~~~l~~~~~~~ 211 (575)
+.+.+++..++.+++.+...+...+++.|.+|++. |++.++.. .....+|..++|.+.|++.+..||+
T Consensus 311 -----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~~ 379 (417)
T d1pv7a_ 311 -----SALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRF------SATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQ 379 (417)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGG------HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCHH
T ss_pred -----ccchhhHHHHHHHHHHHHHHHHHHHHHHHHCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
Confidence 36667788888999999999999999999999999 99999974 5667899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCc
Q 008182 212 VGYGICSVAMFMAIIIFLAGTK 233 (575)
Q Consensus 212 ~~f~~~~~~~~~~~~~~~~~~~ 233 (575)
..|++.++..++..++..+..+
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~l~ 401 (417)
T d1pv7a_ 380 GAYLVLGLVALGFTLISVFTLS 401 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHhhc
Confidence 9999888777666555554433
No 5
>d3b45a1 f.51.1.1 (A:91-270) GlpG {Escherichia coli [TaxId: 562]}
Probab=4.19 E-value=5.4e+02 Score=19.73 Aligned_cols=36 Identities=22% Similarity=0.080 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHH
Q 008182 73 TSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGM 108 (575)
Q Consensus 73 ~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l 108 (575)
...+.....|...+|.+|++|.+.+-.+...++.+.
T Consensus 63 ~N~~~l~~~G~~lE~~~G~~~~~~~~~~~~~~g~l~ 98 (180)
T d3b45a1 63 FNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYV 98 (180)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccchhheeeeeHHHHHHHHH
Confidence 334455556666666559999776665554444443
No 6
>d3proc1 d.52.1.1 (C:6-85) Alpha-lytic protease prodomain {Lysobacter enzymogenes [TaxId: 69]}
Probab=4.15 E-value=5.7e+02 Score=17.37 Aligned_cols=41 Identities=5% Similarity=-0.071 Sum_probs=29.2
Q ss_pred HHHHhhhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008182 48 LVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF 88 (575)
Q Consensus 48 l~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~ 88 (575)
+..-|+++||+++.|+.-=...-.-..-+..-+-.-+.|+|
T Consensus 3 l~~AmqRDLgLt~~qa~~RLa~E~~A~~~~~~lr~~lg~~f 43 (80)
T d3proc1 3 LKFAMQRDLGIFPTQLPQYLQTEKLARTQAAAIEREFGAQF 43 (80)
T ss_dssp HHHHHHHHHCCCGGGHHHHHHHHHHHHHHHHHHHHHHGGGE
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 34557889999999887766666666666666666666666
No 7
>d2qkwa1 a.8.8.1 (A:29-129) Avirulence protein AvrPto {Pseudomonas syringae [TaxId: 317]}
Probab=3.31 E-value=3.3e+02 Score=18.32 Aligned_cols=26 Identities=19% Similarity=0.425 Sum_probs=22.0
Q ss_pred hhheecccCCcchhHHHHHHHHHHHH
Q 008182 466 QLDFFITKSPKGMKTMSTGLFLTTLS 491 (575)
Q Consensus 466 ~~~~~~~~~P~~~rg~~~g~~~~~~~ 491 (575)
.-.++.+++|.+.|..+..+|.-.+.
T Consensus 25 qhefissqap~slr~~ynnlyshtqr 50 (101)
T d2qkwa1 25 QHEFVSSQAPQSLRNRYNNLYSHTQR 50 (101)
T ss_dssp HHTTTSSSCCSSGGGHHHHHHHHHHH
T ss_pred HHHHHhhcCcHHHHHHHhhHHHHHHh
Confidence 45788999999999999999876654
No 8
>d1fftb2 f.17.2.1 (B:27-117) Cytochrome O ubiquinol oxidase, subunit II {Escherichia coli [TaxId: 562]}
Probab=3.29 E-value=1.9e+02 Score=20.32 Aligned_cols=8 Identities=25% Similarity=0.077 Sum_probs=3.3
Q ss_pred hhhhhcCC
Q 008182 546 ICAVWYKP 553 (575)
Q Consensus 546 ~~~~~~~~ 553 (575)
.+..|+++
T Consensus 38 ~~~~ryR~ 45 (91)
T d1fftb2 38 GFAWKYRA 45 (91)
T ss_dssp TTTTTTTT
T ss_pred hhheeeec
Confidence 33344443
No 9
>d2nr9a1 f.51.1.1 (A:4-192) GlpG homolog HI0618 {Haemophilus influenzae [TaxId: 727]}
Probab=3.17 E-value=7.4e+02 Score=19.04 Aligned_cols=39 Identities=8% Similarity=0.146 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHH
Q 008182 73 TSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAM 111 (575)
Q Consensus 73 ~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~~~~~l~~~ 111 (575)
...+.-...|...+|.+|+++.+.+-+....++.++...
T Consensus 65 ~N~~~l~~~g~~~E~~~G~~~~~~~~~~~~~~~~l~~~~ 103 (189)
T d2nr9a1 65 FNLSWFFIFGGMIERTFGSVKLLMLYVVASAITGYVQNY 103 (189)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 334444555666666569999887766655555554443
No 10
>d3b60a2 f.37.1.1 (A:10-328) Multidrug resistance ABC transporter MsbA, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=3.14 E-value=8.2e+02 Score=19.56 Aligned_cols=13 Identities=15% Similarity=0.082 Sum_probs=6.1
Q ss_pred ccchhHHHHHHHH
Q 008182 208 ISRSVGYGICSVA 220 (575)
Q Consensus 208 ~~~~~~f~~~~~~ 220 (575)
.+|.....+....
T Consensus 154 ~~~~l~li~l~~~ 166 (319)
T d3b60a2 154 YSWQLSIILVVLA 166 (319)
T ss_dssp HTTTTHHHHHHHH
T ss_pred hhccchhhhhhHH
Confidence 3566554444333
Done!