Query 008184
Match_columns 574
No_of_seqs 282 out of 1603
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 20:09:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008184.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008184hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fo0_A Actin-related protein 8 100.0 5.2E-93 1.8E-97 797.4 28.3 530 5-558 1-590 (593)
2 4am6_A Actin-like protein ARP8 100.0 1E-88 3.6E-93 740.9 21.7 513 16-558 38-652 (655)
3 3qb0_A Actin-related protein 4 100.0 1E-75 3.5E-80 635.0 24.3 416 16-557 21-497 (498)
4 3dwl_A Actin-related protein 3 100.0 3.1E-75 1.1E-79 625.1 18.8 326 152-558 72-422 (427)
5 1k8k_B ARP2, actin-like protei 100.0 2.1E-68 7.3E-73 568.9 12.1 371 13-555 1-388 (394)
6 2fxu_A Alpha-actin-1, actin, a 100.0 1E-66 3.6E-71 552.5 24.7 367 17-558 4-375 (375)
7 1k8k_A ARP3, actin-like protei 100.0 4.3E-63 1.5E-67 532.1 23.8 380 16-558 3-413 (418)
8 1jce_A ROD shape-determining p 100.0 8.2E-30 2.8E-34 266.1 20.6 277 154-536 42-330 (344)
9 3h1q_A Ethanolamine utilizatio 99.7 6.7E-18 2.3E-22 169.8 10.5 213 173-530 60-272 (272)
10 2v7y_A Chaperone protein DNAK; 99.7 1.6E-17 5.6E-22 182.1 10.0 224 219-532 112-350 (509)
11 1dkg_D Molecular chaperone DNA 99.7 9.1E-17 3.1E-21 169.6 8.4 224 219-532 138-381 (383)
12 3qfu_A 78 kDa glucose-regulate 99.6 2.4E-16 8E-21 166.9 6.4 91 219-310 156-255 (394)
13 3i33_A Heat shock-related 70 k 99.6 1.2E-15 4.1E-20 162.2 4.3 91 219-310 161-263 (404)
14 1yuw_A Heat shock cognate 71 k 99.3 3.3E-11 1.1E-15 133.3 15.2 91 219-310 142-242 (554)
15 2kho_A Heat shock protein 70; 99.2 1.7E-11 5.9E-16 136.8 11.5 110 195-311 120-242 (605)
16 4gni_A Putative heat shock pro 99.1 7.6E-11 2.6E-15 125.4 8.4 111 194-311 134-255 (409)
17 2ych_A Competence protein PILM 99.0 1.8E-09 6E-14 113.4 15.0 90 236-343 156-252 (377)
18 3d2f_A Heat shock protein homo 99.0 8.4E-10 2.9E-14 124.5 9.5 91 219-310 141-246 (675)
19 4b9q_A Chaperone protein DNAK; 99.0 1.3E-08 4.3E-13 113.7 18.4 110 195-311 120-242 (605)
20 2fsj_A Hypothetical protein TA 98.8 9.9E-09 3.4E-13 106.7 9.6 137 152-312 78-240 (346)
21 4a2a_A Cell division protein F 98.7 9.1E-08 3.1E-12 101.9 15.2 89 236-342 173-266 (419)
22 2d0o_A DIOL dehydratase-reacti 97.9 6E-05 2E-09 80.7 12.1 93 232-342 370-467 (610)
23 3js6_A Uncharacterized PARM pr 97.8 0.00014 4.7E-09 75.6 13.8 68 245-312 154-232 (355)
24 1nbw_A Glycerol dehydratase re 97.8 3.4E-05 1.2E-09 82.8 8.4 73 252-342 392-469 (607)
25 2zgy_A Plasmid segregation pro 97.1 0.00053 1.8E-08 69.9 6.1 72 241-312 136-213 (320)
26 4apw_A ALP12; actin-like prote 96.8 0.0012 4.2E-08 67.6 6.1 67 245-311 149-219 (329)
27 1t6c_A Exopolyphosphatase; alp 85.4 1.2 4E-05 45.0 6.4 70 234-306 101-178 (315)
28 3cet_A Conserved archaeal prot 83.9 0.74 2.5E-05 46.6 4.1 25 264-288 127-151 (334)
29 4ehu_A Activator of 2-hydroxyi 83.1 0.2 6.7E-06 49.4 -0.6 66 451-531 188-253 (276)
30 3mdq_A Exopolyphosphatase; str 80.4 1.9 6.4E-05 43.4 5.6 69 234-305 93-170 (315)
31 3cer_A Possible exopolyphospha 78.9 1.6 5.6E-05 44.5 4.6 42 264-305 146-191 (343)
32 1u6z_A Exopolyphosphatase; alp 72.6 5 0.00017 43.2 6.6 39 265-305 138-176 (513)
33 3hi0_A Putative exopolyphospha 70.2 7.1 0.00024 42.0 7.1 68 234-304 104-178 (508)
34 3aap_A Ectonucleoside triphosp 55.3 10 0.00034 38.7 4.6 36 264-299 140-177 (353)
35 2ews_A Pantothenate kinase; PA 54.1 2 6.9E-05 42.6 -0.9 72 450-530 214-286 (287)
36 2i7n_A Pantothenate kinase 1; 43.3 8.5 0.00029 39.4 1.7 74 450-529 283-357 (360)
37 3js6_A Uncharacterized PARM pr 35.5 3.2 0.00011 42.4 -2.9 30 20-51 6-35 (355)
38 2zgy_A Plasmid segregation pro 34.2 5.5 0.00019 39.7 -1.4 47 473-530 273-319 (320)
39 4apw_A ALP12; actin-like prote 33.5 13 0.00043 37.4 1.1 46 472-531 278-323 (329)
40 2fsj_A Hypothetical protein TA 31.7 5.6 0.00019 40.3 -1.9 32 20-52 23-54 (346)
41 2gup_A ROK family protein; sug 28.7 92 0.0032 29.9 6.6 52 235-289 87-143 (292)
42 1hux_A Activator of (R)-2-hydr 26.4 7.6 0.00026 37.9 -1.9 47 474-532 210-256 (270)
43 3cj1_A Ectonucleoside triphosp 25.3 56 0.0019 34.4 4.4 35 264-298 190-225 (456)
44 2e1z_A Propionate kinase; TDCD 24.0 30 0.001 35.9 2.0 31 264-295 210-240 (415)
45 2qm1_A Glucokinase; alpha-beta 21.5 1.9E+02 0.0065 28.0 7.4 47 241-289 106-159 (326)
46 3sk3_A Acetate kinase, acetoki 21.5 37 0.0013 35.3 2.0 57 239-298 190-252 (415)
47 3djc_A Type III pantothenate k 20.6 1.4E+02 0.0049 28.7 6.1 48 266-313 4-52 (266)
No 1
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.2e-93 Score=797.37 Aligned_cols=530 Identities=28% Similarity=0.463 Sum_probs=373.1
Q ss_pred cccCchhhHhhcCC-CeEEEcCCCceeeeecCCCCCCCccceeeeeecCCCCCcchhhHh--hhhcCCCCcchhhhcCCc
Q 008184 5 KTVVPSQLIAERGS-NLVVINPGSANIRIGLAQHDTPLNIPHCIARRTSQVPKRNVVDQI--ASLMKIPFLDEEVANNSF 81 (574)
Q Consensus 5 ~~~~~~~~~~~~~~-~~iVi~~GS~~lkiG~a~d~~P~~iP~~ia~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 81 (574)
.+++|+|+.+..++ ++|||||||++||||||+|..|++||||||||+++.......+.. ......+..+++..
T Consensus 1 ~p~~~~~~~~~~~~~~iIVIdpGS~~~riG~A~d~~P~~iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 76 (593)
T 4fo0_A 1 GPLVPESLQEQIQSNFIIVIHPGSTTLRIGRATDTLPASIPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQ---- 76 (593)
T ss_dssp CCCCCGGGTTTSGGGGEEEEECCSSEEEEEETTCSSCEEEECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHH----
T ss_pred CCCCCCccccccCCCCEEEEeCCCCCeEeeecCCCCCCeeeEEEEEECCCCCCCcccccccccccccccchhhhhh----
Confidence 47899999888665 599999999999999999999999999999998763221111000 00000000111100
Q ss_pred ccccccccchhcccccccccccccccccCCCCCCCccccccccccCCCccccCCCCCCccccccccccCCCceEEccccc
Q 008184 82 PRKMGRVDAFNQQNSRKDVAFSWTNVYEKEPMPSTALESSSSMNHGIIKESMGQHRNTDIKELNSSERKFREFICGEEAL 161 (574)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~n~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~vG~eal 161 (574)
..+ ....+.+...++. ++|++ .+++.+++++||++++||.+++|++..+. +....+++|||++|+
T Consensus 77 -~~~--------~~~~~~~~~~~~~-~~~r~-~~~s~~~~~~~n~~~~p~~i~~~~~~~~~----~~~~~~~~~vG~~al 141 (593)
T 4fo0_A 77 -NGL--------KMVDQAIWSKKMS-NGTRR-IPVSPEQARSYNKQMRPAILDHCSGNKWT----NTSHHPEYLVGEEAL 141 (593)
T ss_dssp -HHH--------HHHHHHHHHSCCT-TSCCC-CCCCHHHHHHHHTTCCCEEEESSCSCCCC----CCTTCCSEEETHHHH
T ss_pred -hhH--------HHHHHHHHHHhhh-ccccc-CCCcHHHhhhhhccCCCcccCCCCccccc----cccccccccccHHHh
Confidence 000 0111122222232 24444 36999999999999999999888655432 223458899999999
Q ss_pred cCCCCCCceEecceecCeeeec--CCCChhhcHHHHHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHHHH-HHHHH
Q 008184 162 RVSPTEPYCIHRPIRRGHLNIS--QHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREIK-EMLSI 238 (574)
Q Consensus 162 ~~~~~~~~~l~~Pi~~G~i~~~--~~~s~~~~~dd~e~iw~~~~~~~L~i~~~~~~~~~~VLv~e~~~~~~~~r-~~~ei 238 (574)
++.+++.|.|+|||+||.+|++ ++.|++.+|+|||+||+|+|+++|+|++++.+.| +||||+++++++..| +|+|+
T Consensus 142 ~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~wdd~e~iw~~~~~~~L~i~~~d~~~~-pvlltep~~~~~~~re~~~ei 220 (593)
T 4fo0_A 142 YVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAVLADIEVIWSHAIQKYLEIPLKDLKYY-RCILLIPDIYNKQHVKELVNM 220 (593)
T ss_dssp TSCTTSSEEEECSEETTEECCCSSTTCSHHHHHHHHHHHHHHHHHHTSCCCGGGGGGC-EEEEEECSSCCHHHHHHHHHH
T ss_pred hcCCcccceEecCcccCccccccCCccchhcCHHHHHHHHHHHHHHhcCCCchhccCC-cEEEEeCCCCCHHHHHHHHHH
Confidence 9987889999999999999986 4559999999999999999999999999886555 677777776666655 69999
Q ss_pred HHHhcCCCeEEEehhhHHHHhhcCCceEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHHHHHHHHhcCCCCCc
Q 008184 239 VLRDLRFASAVVHQEGLAAVFGNGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRHHQTWPQI 318 (574)
Q Consensus 239 lFE~~~~~~v~~~~~svla~ya~G~~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~L~~lL~~~~~~p~~ 318 (574)
|||+|+||++|++++++||+||+|++||||||||++.|+|+||+||++++++++++++||++||++|.++|+.++. ++
T Consensus 221 lFE~f~~pa~~~~~~~vla~ya~G~~tglVVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~--~~ 298 (593)
T 4fo0_A 221 ILMKMGFSGIVVHQESVCATYGSGLSSTCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGF--PY 298 (593)
T ss_dssp HHHTTCCSEEEEEEHHHHHHHHHTCSEEEEEEECSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTC--SC
T ss_pred HHHhcCCCeEEeechHHHHHHHCCCCceEEEEeCCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCC--Cc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988753 24
Q ss_pred ccccccccccHHHHHHHHHhceeccCCccccccccccccCCCCCCC-ceeEee---eecCCCCcCCCCcccCCCCCCC--
Q 008184 319 RTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGS-HKTRLI---ALNVPPMGLFYPKLLVPDVYPP-- 392 (574)
Q Consensus 319 ~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~y~~~~p~~~-~k~~~~---~~~~ap~~lf~p~~~~~e~~~~-- 392 (574)
.+.++....|++++++|||++|||+.+....... .+....|++. .++.++ +...+|+++|+|.++..+....
T Consensus 299 ~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~~--~~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~ 376 (593)
T 4fo0_A 299 RECQLTNKMDCLLLQHLKETFCHLDQDISGLQDH--EFQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTT 376 (593)
T ss_dssp TTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEEE--EEEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEE
T ss_pred cccccccchhHHHHHHHHHHhcccccchHHhhhh--hhhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccch
Confidence 4556777889999999999999999753322111 1111245443 233333 4567899999998775332100
Q ss_pred --------CCCCC----C---------------CCccccccCCccccCC-CCCCCCCCCCCCCCC-CCCCC-------CC
Q 008184 393 --------PPRSW----F---------------NDYEDMLEDTWHTDFP-RRSDISDNFYPGINV-GLPMW-------ES 436 (574)
Q Consensus 393 --------p~~~~----~---------------~d~~d~~~d~~~~~~~-er~~~~E~lF~~~~g-~~~~~-------~~ 436 (574)
|.... . ......++++..+.++ +|+.++|.+|.+... ..... +.
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~ 456 (593)
T 4fo0_A 377 LQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADRKSASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDS 456 (593)
T ss_dssp ECC-----------------------------------------------------------------------------
T ss_pred hhhhcccCcccchhhhhhhhcccchhhhhhcccccccccCCCCcccccccccccCchhccCccccccccccccccccccc
Confidence 00000 0 0000122344444453 799999999943211 10000 00
Q ss_pred CCc--------cCCCCCccccCCHHHHHHHHHHcCCChhHHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCC--c
Q 008184 437 YPV--------LTTKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEA--I 506 (574)
Q Consensus 437 ~~~--------~~~~~~~~~~~gL~e~I~~sI~~~~~~d~r~~L~~NIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~--i 506 (574)
.+. ........+..||+++|.+||.+|++.|+|+.||+|||||||+|+||||.+||++||..++|...+ +
T Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~ 536 (593)
T 4fo0_A 457 EEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSSDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRII 536 (593)
T ss_dssp --------------CHHHHSCCCHHHHHHHHHHTCSSHHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHS
T ss_pred ccccccccccccccccccccCCCHHHHHHHHHHhCCcHHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhcccc
Confidence 000 000011234579999999999999336999999999999999999999999999999999986532 2
Q ss_pred ceEEEcCCC--CCCceeeEeceeeecccCCcccceeeHHHHHhcCCCceecccc
Q 008184 507 DMVEVLQSR--TNPTYVSWKGGAVLGILDFGRDAWIHREDWIRNGIHIGSGRKY 558 (574)
Q Consensus 507 ~~V~v~~~~--~d~~~~aW~GgSIla~L~~f~~~wItr~eYee~G~~i~~~k~~ 558 (574)
.+|+|++.+ .||++++|+||||||+|++|+++||||+||+|+|++||++||.
T Consensus 537 ~~v~v~~~p~~~d~~~~aW~GgSilasL~~f~~~wItk~EYeE~G~~il~~kc~ 590 (593)
T 4fo0_A 537 ENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIYQREWQRFGVRMLRERAA 590 (593)
T ss_dssp SCCEEESSGGGCCTTTHHHHHHHHHHHCGGGGGTCEEHHHHHHHTTHHHHHHCS
T ss_pred ceEEEECCCCCCCCceeeehhhHHHhcCccHHHeeECHHHHHhhCcHHHhhcCC
Confidence 356777643 5899999999999999999999999999999999999999994
No 2
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=1e-88 Score=740.88 Aligned_cols=513 Identities=22% Similarity=0.375 Sum_probs=373.9
Q ss_pred cCCCeEEEcCCCceeeeecCCCCCCCccceeeeeecCCCCCcchhhHhhhhcCCCCcchhhhcCCcccccccccchhccc
Q 008184 16 RGSNLVVINPGSANIRIGLAQHDTPLNIPHCIARRTSQVPKRNVVDQIASLMKIPFLDEEVANNSFPRKMGRVDAFNQQN 95 (574)
Q Consensus 16 ~~~~~iVi~~GS~~lkiG~a~d~~P~~iP~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (574)
.+++||||||||+|||||||+|..|++||||||||++..........-.+.+ ...++++|. + . ...
T Consensus 38 ~~~~~IVIHpGS~~lRIG~AsD~~P~~ip~~iA~~~~~~~~~~~~~~~~~~~-~~~~~~~f~-----~------~--~~~ 103 (655)
T 4am6_A 38 DPTATIVIHPGSNSIKIGFPKDDHPVVVPNCVAVPKKWLDLENSEHVENVCL-QREQSEEFN-----N------I--KSE 103 (655)
T ss_dssp CGGGEEEEECCSSEEEEECTTSSSCEEEESCEEEEGGGSCCSSSCCCCTTCC-CSCCCHHHH-----H------H--HHH
T ss_pred CCCCeEEEcCCCcceeeeecCCCCCcccceeEEeccccccCCCccccCcccc-chhhhHHHH-----H------H--HHH
Confidence 4699999999999999999999999999999999876522110000000001 112344432 0 0 013
Q ss_pred ccccccccccccccCCCCCCCccccccccccCCCccccCCCCCCccccccccccCCCceEEccccccCCCCCCceEecce
Q 008184 96 SRKDVAFSWTNVYEKEPMPSTALESSSSMNHGIIKESMGQHRNTDIKELNSSERKFREFICGEEALRVSPTEPYCIHRPI 175 (574)
Q Consensus 96 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~n~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~vG~eal~~~~~~~~~l~~Pi 175 (574)
++++|+.+|| +||||+.| |++++|++||++++||.|++||++...+|... .+++|||+||+.+. ++.+.++|||
T Consensus 104 ~~~~~k~rmr-~~k~r~~p-n~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~---~~d~~VGdEA~~~~-r~~l~l~~PI 177 (655)
T 4am6_A 104 MEKNFRERMR-YYKRKVPG-NAHEQVVSFNENSKPEIISEKNDPSPIEWIFD---DSKLYYGSDALRCV-DEKFVIRKPF 177 (655)
T ss_dssp HHHHHHHHHH-HHSCCCST-TCCSSTTCCEEEECSCCCCSSSSCCSCCCBCC---TTSCEEHHHHHTBC-TTTEEEECSE
T ss_pred HHHHHHHHHh-hcCCCCCC-CCHHHHHHhcCCCCCeECCCCCCccccccccC---CCCEEEehHHhhCC-ccCeEEeccc
Confidence 3456666544 34777655 99999999999999999999976655554322 37899999999864 4789999999
Q ss_pred ecCeeeec--CCCChhhcHHHHHHHHHHHHh-hhcCCCCC---CCcccceeeecCCCCChHHHHH-HHHHHHHhcCCCeE
Q 008184 176 RRGHLNIS--QHYPMQQVLEDLYAIWDWILT-EKLHIPRS---ERNLYSAILVLPESFDNREIKE-MLSIVLRDLRFASA 248 (574)
Q Consensus 176 ~~G~i~~~--~~~s~~~~~dd~e~iw~~~~~-~~L~i~~~---~~~~~~~VLv~e~~~~~~~~r~-~~eilFE~~~~~~v 248 (574)
++|+|+.+ +|.|+|.+||++|.||+|+|+ ++|+++++ ++ +||||+++++++..|+ |+|+|||+|+||++
T Consensus 178 ~~GvI~~~s~Dy~s~q~~WD~mE~Iw~y~f~~~~L~V~p~~~~e~----pVLLTEPplnp~~~REkm~EIlFE~fgvpav 253 (655)
T 4am6_A 178 RGGSFNVKSPYYKSLAELISDVTKLLEHALNSETLNVKPTKFNQY----KVVLVIPDIFKKSHVETFIRVLLTELQFQAV 253 (655)
T ss_dssp ETTEECTTCSSCSSHHHHHHHHHHHHHHHHBSSSCBCCGGGGGGC----EEEEEECTTCCHHHHHHHHHHHHHTSCCSEE
T ss_pred cCCEecccCCccccccccHHHHHHHHHHHhccccccccccccCCC----cEEEEeCCCCCHHHHHHHHHHHHhhcCCCee
Confidence 99999853 677999999999999999998 49999987 56 8999999999888875 99999999999999
Q ss_pred EEehhhHHHHhhcC-CceEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHHHHHHHHhcCCCCCcccccccccc
Q 008184 249 VVHQEGLAAVFGNG-LSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTKAM 327 (574)
Q Consensus 249 ~~~~~svla~ya~G-~~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~L~~lL~~~~~~p~~~~~~l~~~~ 327 (574)
+++++++||+||+| .+||||||+|++.|+|+||++|+++++++.++++||+++|++|.++|+.++. | |++++|++..
T Consensus 254 yl~~qavlAlyasGl~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgy-p-y~~~~f~t~~ 331 (655)
T 4am6_A 254 AIIQESLATCYGAGISTSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDF-P-LQDWKIDSKH 331 (655)
T ss_dssp EEEEHHHHHHHHSCCSSCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTC-S-CCSCCTTSHH
T ss_pred eeccHHHHHHHhCCCCCceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCC-C-ccccCCCCcc
Confidence 99999999999999 6999999999999999999999999999999999999999999999998863 2 3455778888
Q ss_pred cHHHHHHHHHhceeccCCccccccccccccCCCCCC-CceeEee---eecCCCCcCCCCcccCCCCCCCCC----CCCCC
Q 008184 328 DLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPG-SHKTRLI---ALNVPPMGLFYPKLLVPDVYPPPP----RSWFN 399 (574)
Q Consensus 328 d~~l~e~lKe~~c~v~~~~~~~~~~~~~y~~~~p~~-~~k~~~~---~~~~ap~~lf~p~~~~~e~~~~p~----~~~~~ 399 (574)
+++++++|||++|||+..++. .+.+..+. ..|+. +.+|.++ +.++||+++|+|.++..+...... +.+++
T Consensus 332 e~eiVrdIKEk~CyVs~~Di~-~q~~~f~~-r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~~~~~~~~~~~~~~~~ 409 (655)
T 4am6_A 332 GWLLAERLKKNFTTFQDADVA-VQLYNFMN-RSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLP 409 (655)
T ss_dssp HHHHHHHHHHHHCCCCGGGCC-SEEEEEEE-CCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHTSCCCCCCHHHHTTSC
T ss_pred hHHHHHHHHHheEEEcccchh-hhhhccee-ccCCCCCcceEEEECCeehhCchhcCChhhcccccccccccchhhhhcC
Confidence 999999999999999755553 22222222 23443 3455554 567899999999988644322111 11222
Q ss_pred C----ccccccCCccccCCCCCCCCCCCCCCCCCCCCC-------------CCCCCccCCCCCccccCCHHHHHHHHHHc
Q 008184 400 D----YEDMLEDTWHTDFPRRSDISDNFYPGINVGLPM-------------WESYPVLTTKPKKEEKIGLAEAVTSSILS 462 (574)
Q Consensus 400 d----~~d~~~d~~~~~~~er~~~~E~lF~~~~g~~~~-------------~~~~~~~~~~~~~~~~~gL~e~I~~sI~~ 462 (574)
. |++..+|+.++.-. -......++.....+.+ .+..+...........+||+.||.+||..
T Consensus 410 ~s~d~y~~~~nd~~S~~q~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLdkAIi~SIt~ 487 (655)
T 4am6_A 410 ESRDLFTNELNDWNSLSQF--ESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEKAIVQSIAN 487 (655)
T ss_dssp CCBCTTTCCBCSCCCHHHH--HHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCCCCHHHHHHHHHHH
T ss_pred ccccccCCCCCCccchhHH--hhhccccCCCCccHhhhhhhhhcccccccccccCCcccccccccccccHHHHHHHHHHh
Confidence 2 33333443322100 00000111100000000 00000000011113468999999999995
Q ss_pred CCC-hhHH--HHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCC-----------------------------------
Q 008184 463 TGR-IDLQ--RKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNE----------------------------------- 504 (574)
Q Consensus 463 ~~~-~d~r--~~L~~NIvL~GG~S~ipGf~eRL~~eL~~~~p~~~----------------------------------- 504 (574)
+|. .|.+ ++||+||+|+||||+||||...|+++|....|.-.
T Consensus 488 a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (655)
T 4am6_A 488 ASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENK 567 (655)
T ss_dssp HHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHSTTCSCCSSSCCSST
T ss_pred hhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhhhccccccccccch
Confidence 432 3555 59999999999999999999999999987544211
Q ss_pred -----------------------------CcceEEEcCC--CCCCceeeEeceeeecccCCcccceeeHHHHHhcCCCce
Q 008184 505 -----------------------------AIDMVEVLQS--RTNPTYVSWKGGAVLGILDFGRDAWIHREDWIRNGIHIG 553 (574)
Q Consensus 505 -----------------------------~i~~V~v~~~--~~d~~~~aW~GgSIla~L~~f~~~wItr~eYee~G~~i~ 553 (574)
.+.+|+|+++ ++||++++|+||||||+|++|++|||||+||+|+|++|+
T Consensus 568 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~l~~f~e~wIt~~Eyde~G~~il 647 (655)
T 4am6_A 568 QILQAQIKEKIVEELEEQHQNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVHGSRIL 647 (655)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHHHHTTSCCCBCCCCEECCCTTSCGGGHHHHHHHHHTTSHHHHHHCEEHHHHHHHGGGGG
T ss_pred hhhhhhhhhhhhhhhhhhhhhhhhccccCCceeeEEeCCccccCcceeEEecceeeeecccHhheeecHHHHhhhcchhe
Confidence 1123666653 468899999999999999999999999999999999999
Q ss_pred ecccc
Q 008184 554 SGRKY 558 (574)
Q Consensus 554 ~~k~~ 558 (574)
++||.
T Consensus 648 ~~k~~ 652 (655)
T 4am6_A 648 QYKCI 652 (655)
T ss_dssp GTSCS
T ss_pred Eeccc
Confidence 99984
No 3
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-75 Score=635.03 Aligned_cols=416 Identities=21% Similarity=0.304 Sum_probs=310.8
Q ss_pred cCCCeEEEcCCCceeeeecCCCCCC-CccceeeeeecCCCCCcchhhHhhhhcCCCCcchhhhcCCcccccccccchhcc
Q 008184 16 RGSNLVVINPGSANIRIGLAQHDTP-LNIPHCIARRTSQVPKRNVVDQIASLMKIPFLDEEVANNSFPRKMGRVDAFNQQ 94 (574)
Q Consensus 16 ~~~~~iVi~~GS~~lkiG~a~d~~P-~~iP~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (574)
....+||||+||+++|+|||++..| .++|++||++++..
T Consensus 21 de~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~---------------------------------------- 60 (498)
T 3qb0_A 21 DEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE---------------------------------------- 60 (498)
T ss_dssp CCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS----------------------------------------
T ss_pred CCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC----------------------------------------
Confidence 3457999999999999999999999 78999999975320
Q ss_pred cccccccccccccccCCCCCCCccccccccccCCCccccCCCCCCccccccccccCCCceEEccccccCCCCCCceEecc
Q 008184 95 NSRKDVAFSWTNVYEKEPMPSTALESSSSMNHGIIKESMGQHRNTDIKELNSSERKFREFICGEEALRVSPTEPYCIHRP 174 (574)
Q Consensus 95 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~n~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~vG~eal~~~~~~~~~l~~P 174 (574)
.++++||+++.... ++.+.++||
T Consensus 61 --------------------------------------------------------~~~~~vG~e~~~~~-r~~l~l~~P 83 (498)
T 3qb0_A 61 --------------------------------------------------------GNKKIFSEQSIGIP-RKDYELKPI 83 (498)
T ss_dssp --------------------------------------------------------SCCEECCTTGGGSC-CTTEEEEES
T ss_pred --------------------------------------------------------CccEEEecHHHhcC-cCceEEecc
Confidence 03468999844433 578999999
Q ss_pred eecCeeeecCCCChhhcHHHHHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHHHHH-HHHHHHHhcCCCeEEEehh
Q 008184 175 IRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREIKE-MLSIVLRDLRFASAVVHQE 253 (574)
Q Consensus 175 i~~G~i~~~~~~s~~~~~dd~e~iw~~~~~~~L~i~~~~~~~~~~VLv~e~~~~~~~~r~-~~eilFE~~~~~~v~~~~~ 253 (574)
|++|+|. |||++|.||+|+|++.|++++.++. ||||++++++++..|+ |+|+|||+||||+++++.+
T Consensus 84 i~~GvI~---------dwd~~E~iw~~~f~~~L~v~p~~~~---pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~ 151 (498)
T 3qb0_A 84 IENGLVI---------DWDTAQEQWQWALQNELYLNSNSGI---PALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPT 151 (498)
T ss_dssp EETTEES---------CHHHHHHHHHHHHHHTSCCSCCTTC---CEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEH
T ss_pred CcCCEEc---------cHHHHHHHHHHHHHhhhCCCcccCC---ceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecch
Confidence 9999999 9999999999999989999998873 6999999999988874 9999999999999999999
Q ss_pred hHHHHhhcCCceEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHHHHHHHHhcCCCCCcc-----------ccc
Q 008184 254 GLAAVFGNGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRHHQTWPQIR-----------TDI 322 (574)
Q Consensus 254 svla~ya~G~~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~L~~lL~~~~~~p~~~-----------~~~ 322 (574)
++||+||+|++||||||+|++.|+|+||++|+++++++.++++||+++|++|.++|+.++..|.|. .+.
T Consensus 152 ~vlalya~G~~tglVVDiG~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~ 231 (498)
T 3qb0_A 152 STCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFD 231 (498)
T ss_dssp HHHHHHHHTCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCS
T ss_pred HHHHHHHcCCCeEEEEEcCCCcEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCC
Confidence 999999999999999999999999999999999999999999999999999999998764333321 111
Q ss_pred c------cccc-cHHHHHHHHHhceeccCC-ccccc------cccccccCCCCCCCceeEeee-ecCCCCcCCCCcccCC
Q 008184 323 L------TKAM-DLLMLNRIKESYCEIKEG-EIDAV------AVVHSYEDGMPPGSHKTRLIA-LNVPPMGLFYPKLLVP 387 (574)
Q Consensus 323 l------~~~~-d~~l~e~lKe~~c~v~~~-~~~~~------~~~~~y~~~~p~~~~k~~~~~-~~~ap~~lf~p~~~~~ 387 (574)
+ .+.. +.+++++|||++|||+.+ +++.. .....|+ +||++......+ .+.+|+.||+|.++..
T Consensus 232 ~~~~~s~~~~~~~~~iv~~iKE~~c~Va~~~~~~~~~~~~~~~~~~~ye--LPDG~~i~lg~E~Rf~~pE~LF~P~~~g~ 309 (498)
T 3qb0_A 232 YEVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELSSTAKRSIE--SPWNEEIVFDNETRYGFAEELFLPKEDDI 309 (498)
T ss_dssp SCCCHHHHHHHHHHTHHHHHHHHTCCCCSSCHHHHHHHHHHTCCCEEEE--CSSSCEEEECHHHHHHHHHTTTSCCGGGS
T ss_pred CccCccHHHHHHHHHHHHHHHHhhEEecCCccHhHHhhhccCcCceEEE--CCCCCEEEECchHhhhCchhhCCHhHcCC
Confidence 1 1122 456999999999999874 23211 1233455 888864322234 5678888888876531
Q ss_pred -CCCCCCCCCCCCCccccccCCccccCCCCCC---------------------CCCC---CC-CC----CCCCCCCCCCC
Q 008184 388 -DVYPPPPRSWFNDYEDMLEDTWHTDFPRRSD---------------------ISDN---FY-PG----INVGLPMWESY 437 (574)
Q Consensus 388 -e~~~~p~~~~~~d~~d~~~d~~~~~~~er~~---------------------~~E~---lF-~~----~~g~~~~~~~~ 437 (574)
+..... ...++++.. +...- . .+.. +||. +| ++ ..+..++.+
T Consensus 310 ~~~~~~~---~~~~~~~~~-~~y~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 381 (498)
T 3qb0_A 310 PANWPRS---NSGVVKTWR-NDYVP-L-KRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEE-- 381 (498)
T ss_dssp CTTSCCC---SSSCCCCCS-CCCCC-C-CBCC------------------------------------------------
T ss_pred ccccccc---ccccccccc-ccccc-c-cccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence 110000 000111110 11000 0 0000 0000 00 00 000000000
Q ss_pred CccCCCCCccccCCHHHHHHHHHHcCCChhHHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCC--C
Q 008184 438 PVLTTKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQS--R 515 (574)
Q Consensus 438 ~~~~~~~~~~~~~gL~e~I~~sI~~~~~~d~r~~L~~NIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~i~~V~v~~~--~ 515 (574)
........+..||+++|.+||++| |.|+|+.||+||||+||+|++|||.+||++||..++| ..+ |+|+.. +
T Consensus 382 --~~~~~~~~~~~Gi~e~i~~sI~~c-d~d~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p-~~~---i~v~~~~~~ 454 (498)
T 3qb0_A 382 --EKPPKENNELIGLADLVYSSIMSS-DVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLK---FRILTTGHT 454 (498)
T ss_dssp ---------CCSCCHHHHHHHHHHTS-CTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHST-TSC---CCEECCSCT
T ss_pred --cccccccccCCCchHHHHHHHHhC-CHHHHHHHhcCEEEeCCccCchhHHHHHHHHHHHhCC-CCe---eEEEcCCCC
Confidence 000000126789999999999999 9999999999999999999999999999999999999 544 455542 2
Q ss_pred CCCceeeEeceeeecccCCcccceeeHHHHHhcCC-Cceeccc
Q 008184 516 TNPTYVSWKGGAVLGILDFGRDAWIHREDWIRNGI-HIGSGRK 557 (574)
Q Consensus 516 ~d~~~~aW~GgSIla~L~~f~~~wItr~eYee~G~-~i~~~k~ 557 (574)
.+|.+++|+||||||+|++|++|||||+||+|+|+ +||||||
T Consensus 455 ~er~~s~WiGgsilasl~~f~~~witk~EY~E~G~~~iv~~kc 497 (498)
T 3qb0_A 455 IERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERLLNDRF 497 (498)
T ss_dssp GGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCCHHHHHHTT
T ss_pred CccCccEEcccEEEecCcchhceEEEHHHHhhhCcHhhccccC
Confidence 68999999999999999999999999999999999 9999998
No 4
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.1e-75 Score=625.06 Aligned_cols=326 Identities=21% Similarity=0.305 Sum_probs=264.5
Q ss_pred CceEEccccccCCCCCCceEecceecCeeeecCCCChhhcHHHHHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHH
Q 008184 152 REFICGEEALRVSPTEPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNRE 231 (574)
Q Consensus 152 ~~~~vG~eal~~~~~~~~~l~~Pi~~G~i~~~~~~s~~~~~dd~e~iw~~~~~~~L~i~~~~~~~~~~VLv~e~~~~~~~ 231 (574)
+++|||+||+... ...+.++|||++|+|. |||++|+||+|+|++.|+++++++ +||||+++++++.
T Consensus 72 ~~~~vG~ea~~~~-~~~l~~~~Pi~~GvI~---------dwd~~e~iw~~~~~~~L~v~~~~~----pvlltep~~~~~~ 137 (427)
T 3dwl_A 72 LDFFIGNDALKKA-SAGYSLDYPIRHGQIE---------NWDHMERFWQQSLFKYLRCEPEDH----YFLLTEPPLNPPE 137 (427)
T ss_dssp SCCEETHHHHHTH-HHHCCCCCSEETTEEC---------CHHHHHHHHHHHHHTTSCCCGGGC----EEEEEECTTCCHH
T ss_pred CCeEEchHHhhCc-ccCcEEecCcccCeec---------cHHHHHHHHHHHHhHhhCCCCcCC----cEEEEcCCCCCHH
Confidence 6789999999864 2379999999999999 999999999999999999999988 8999999999988
Q ss_pred HHH-HHHHHHHhcCCCeEEEehhhHHHHhhcC--------CceEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHH
Q 008184 232 IKE-MLSIVLRDLRFASAVVHQEGLAAVFGNG--------LSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDIS 302 (574)
Q Consensus 232 ~r~-~~eilFE~~~~~~v~~~~~svla~ya~G--------~~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it 302 (574)
.|+ |+|++||+||||+++++.+++||+||+| .+||||||+|++.|+|+||+||+++++++.++++||+++|
T Consensus 138 ~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt 217 (427)
T 3dwl_A 138 NRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVT 217 (427)
T ss_dssp HHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHH
T ss_pred HHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHH
Confidence 885 9999999999999999999999999999 6899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcccccccccccHHHHHHHHHhceeccCCccccccccccccCCCCCCCceeEeeeecCCCCcCCCC
Q 008184 303 RCLLWTQRHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGSHKTRLIALNVPPMGLFYP 382 (574)
Q Consensus 303 ~~L~~lL~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~y~~~~p~~~~k~~~~~~~~ap~~lf~p 382 (574)
++|.++|+.++. . ..+.+++++|||++|||+.+ ... +...+.. .+.. ++...+.
T Consensus 218 ~~L~~lL~~~~~-------~---~~~~~~~~~IKe~~cyv~~d-~~~--e~~~~~~-~~~~-----~~~~~l~------- 271 (427)
T 3dwl_A 218 YFVQSLLRDRNE-------P---DSSLKTAERIKEECCYVCPD-IVK--EFSRFDR-EPDR-----YLKYASE------- 271 (427)
T ss_dssp HHHHHTTC------------------CHHHHHHHHHHCCCCSC-HHH--HHHHTTC-----------CCBCC--------
T ss_pred HHHHHHHHHcCC-------C---chhHHHHHHHHHhcCcccCC-HHH--HHHHhhc-Cccc-----cceeEee-------
Confidence 999999987652 1 45678999999999999864 110 1111110 1110 0000000
Q ss_pred cccCCCCCCCCCCCCCCCccccccCCc--cccCC-CCCCCCCCCC-CCCCCCCCCCCCCCccCCCCCccc-cCCHHHHHH
Q 008184 383 KLLVPDVYPPPPRSWFNDYEDMLEDTW--HTDFP-RRSDISDNFY-PGINVGLPMWESYPVLTTKPKKEE-KIGLAEAVT 457 (574)
Q Consensus 383 ~~~~~e~~~~p~~~~~~d~~d~~~d~~--~~~~~-er~~~~E~lF-~~~~g~~~~~~~~~~~~~~~~~~~-~~gL~e~I~ 457 (574)
.+++. .+.++ |||.+||.|| |+..| .+ ..||+++|.
T Consensus 272 ----------------------~~~g~~~~i~ig~erf~~pE~LF~P~~~g-----------------~~~~~gI~~~i~ 312 (427)
T 3dwl_A 272 ----------------------SITGHSTTIDVGFERFLAPEIFFNPEIAS-----------------SDFLTPLPELVD 312 (427)
T ss_dssp ------------------------------CBCCTHHHHSGGGGTCGGGTC-----------------SSCCSCHHHHHH
T ss_pred ----------------------CCCCCeeEEEEChHhhhChhhccCchhcC-----------------CccCCCccHHHH
Confidence 01111 34444 7999999999 44544 34 479999999
Q ss_pred HHHHcCCChhHHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCC-----------CcceEEEcCCCCCCceeeEece
Q 008184 458 SSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNE-----------AIDMVEVLQSRTNPTYVSWKGG 526 (574)
Q Consensus 458 ~sI~~~~~~d~r~~L~~NIvL~GG~S~ipGf~eRL~~eL~~~~p~~~-----------~i~~V~v~~~~~d~~~~aW~Gg 526 (574)
+||++| |+|+|+.||+||||+||+|++|||.+||++||+.++|... .-.+|+|.. +.+|+|++|+||
T Consensus 313 ~sI~~c-~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~-~~~r~~s~WiGG 390 (427)
T 3dwl_A 313 NVVQSS-PIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVIS-HKRQRNAVWFGG 390 (427)
T ss_dssp HHHHTS-CHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEEC-CTTCTTHHHHHH
T ss_pred HHHHhC-CHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEec-CCccccceecCc
Confidence 999999 9999999999999999999999999999999999874321 001456665 458999999999
Q ss_pred eeecccCCcccceeeHHHHHhcCCCceecccc
Q 008184 527 AVLGILDFGRDAWIHREDWIRNGIHIGSGRKY 558 (574)
Q Consensus 527 SIla~L~~f~~~wItr~eYee~G~~i~~~k~~ 558 (574)
||||+|++|+++||||+||+|+|++|||||+.
T Consensus 391 Silasl~~f~~~witk~EYeE~G~~iv~~~~~ 422 (427)
T 3dwl_A 391 SLLAQTPEFGSYCHTKADYEEYGASIARRYQI 422 (427)
T ss_dssp HHHHHSTTHHHHSEEHHHHHHSCGGGGSCCCC
T ss_pred eeeccccchhheeEEHHHHhhhChHhheeccc
Confidence 99999999999999999999999999999873
No 5
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=2.1e-68 Score=568.86 Aligned_cols=371 Identities=20% Similarity=0.363 Sum_probs=135.4
Q ss_pred HhhcCCCeEEEcCCCceeeeecCCCCCC-CccceeeeeecCCCCCcchhhHhhhhcCCCCcchhhhcCCcccccccccch
Q 008184 13 IAERGSNLVVINPGSANIRIGLAQHDTP-LNIPHCIARRTSQVPKRNVVDQIASLMKIPFLDEEVANNSFPRKMGRVDAF 91 (574)
Q Consensus 13 ~~~~~~~~iVi~~GS~~lkiG~a~d~~P-~~iP~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (574)
|..++.++||||+||+++|+|||++..| .++|++||+++.....
T Consensus 1 ~~~~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~----------------------------------- 45 (394)
T 1k8k_B 1 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTT----------------------------------- 45 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccc-----------------------------------
Confidence 3455778999999999999999999999 6899999987643100
Q ss_pred hcccccccccccccccccCCCCCCCccccccccccCCCccccCCCCCCccccccccccCCCceEEccccccCCCCCCceE
Q 008184 92 NQQNSRKDVAFSWTNVYEKEPMPSTALESSSSMNHGIIKESMGQHRNTDIKELNSSERKFREFICGEEALRVSPTEPYCI 171 (574)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~n~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~vG~eal~~~~~~~~~l 171 (574)
+. .. ...++++||++|... ++.+.+
T Consensus 46 -------------~~---------~~-------------------------------~~~~~~~vG~ea~~~--~~~~~~ 70 (394)
T 1k8k_B 46 -------------KV---------GN-------------------------------IEIKDLMVGDEASEL--RSMLEV 70 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------cc---------cC-------------------------------CCCCCeEEChHHHhc--CCCcee
Confidence 00 00 011467899999887 457999
Q ss_pred ecceecCeeeecCCCChhhcHHHHHHHHHHHH-hhhcCCCCCCCcccceeeecCCCCChHHHHH-HHHHHHHhcCCCeEE
Q 008184 172 HRPIRRGHLNISQHYPMQQVLEDLYAIWDWIL-TEKLHIPRSERNLYSAILVLPESFDNREIKE-MLSIVLRDLRFASAV 249 (574)
Q Consensus 172 ~~Pi~~G~i~~~~~~s~~~~~dd~e~iw~~~~-~~~L~i~~~~~~~~~~VLv~e~~~~~~~~r~-~~eilFE~~~~~~v~ 249 (574)
++||++|.|. ||+++|.||+|+| ++.|+++++++ +||++++++++...|+ +++++||.||+++++
T Consensus 71 ~~Pi~~G~i~---------dwd~~e~i~~~~~~~~~L~~~~~~~----~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~ 137 (394)
T 1k8k_B 71 NYPMENGIVR---------NWDDMKHLWDYTFGPEKLNIDTRNC----KILLTEPPMNPTKNREKIVEVMFETYQFSGVY 137 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccccCCEEe---------cHHHHHHHHHHHhcccccCcCCCCC----cEEEEECCCCCHHHHHHHHHHhhhccCCCeEE
Confidence 9999999998 9999999999999 88999999888 7999999998887775 999999999999999
Q ss_pred EehhhHHHHhhcCCceEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHHHHHHHHhcCCCCCcccccccccccH
Q 008184 250 VHQEGLAAVFGNGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTKAMDL 329 (574)
Q Consensus 250 ~~~~svla~ya~G~~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~L~~lL~~~~~~p~~~~~~l~~~~d~ 329 (574)
++.+++||+||+|+++|||||+|+++|+|+||+||+++.+++.++++||+++|++|.++|+.++ +++.+..++
T Consensus 138 ~~~~~~~a~~a~g~~~~lVVDiG~g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~-------~~~~~~~~~ 210 (394)
T 1k8k_B 138 VAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRG-------YAFNHSADF 210 (394)
T ss_dssp ----------------CCEEEECSSCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTT-------CCCCTTTTH
T ss_pred EEhhHHHHHHhCCCceEEEEEcCCCceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcC-------CCCCcHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998764 245555688
Q ss_pred HHHHHHHHhceeccCCccccccccccccCCCCCCCceeEeeeecCCCCcCCCCcccCCCCCCCCCCCCCCCccccccCCc
Q 008184 330 LMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGSHKTRLIALNVPPMGLFYPKLLVPDVYPPPPRSWFNDYEDMLEDTW 409 (574)
Q Consensus 330 ~l~e~lKe~~c~v~~~~~~~~~~~~~y~~~~p~~~~k~~~~~~~~ap~~lf~p~~~~~e~~~~p~~~~~~d~~d~~~d~~ 409 (574)
+.+++||+++|+++.+.... ...... .......+ .++|+.
T Consensus 211 ~~ae~iK~~~~~v~~d~~~~---~~~~~~-~~~~~~~~------------------------------------~lpdg~ 250 (394)
T 1k8k_B 211 ETVRMIKEKLCYVGYNIEQE---QKLALE-TTVLVESY------------------------------------TLPDGR 250 (394)
T ss_dssp HHHHHHHHHHCCCCSSHHHH---HHHHHH-CSTTCEEE------------------------------------ECTTSC
T ss_pred HHHHHHHHhheeEecCHHHH---HHhhcc-CCcCceEE------------------------------------ECCCCC
Confidence 99999999999997531100 000000 00000000 122333
Q ss_pred cccCC-CCCCCCCCCC-CCCCCCCCCCCCCCccCCCCCccccCCHHHHHHHHHHcCCChhHHHHHhcCeEEEcCCCCcCC
Q 008184 410 HTDFP-RRSDISDNFY-PGINVGLPMWESYPVLTTKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGG 487 (574)
Q Consensus 410 ~~~~~-er~~~~E~lF-~~~~g~~~~~~~~~~~~~~~~~~~~~gL~e~I~~sI~~~~~~d~r~~L~~NIvL~GG~S~ipG 487 (574)
.+.++ +||.++|.|| |...+ .+..+|+++|.++|.+| |.|+|+.|++||+||||+|++||
T Consensus 251 ~i~i~~erf~~~E~Lf~p~~~~-----------------~~~~~i~~~i~~~i~~~-~~d~r~~l~~nIvLtGG~s~~~G 312 (394)
T 1k8k_B 251 IIKVGGERFEAPEALFQPHLIN-----------------VEGVGVAELLFNTIQAA-DIDTRSEFYKHIVLSGGSTMYPG 312 (394)
T ss_dssp EEEECTHHHHTGGGGTCGGGGT-----------------CCSCCHHHHHHHHHHHS-CTTTHHHHHTTCEEESGGGCSTT
T ss_pred EEEECchhhcChHhhCCchhcc-----------------CCCCCHHHHHHHHHHhC-CHHHHHHHHhCEEEeCccccccc
Confidence 34443 6889999999 44443 35679999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHhhhC-----------CCCCCcceEEEcCCCCCCceeeEeceeeecccCCcc-cceeeHHHHHhcCCCceec
Q 008184 488 LIPAVEERVLHAI-----------PSNEAIDMVEVLQSRTNPTYVSWKGGAVLGILDFGR-DAWIHREDWIRNGIHIGSG 555 (574)
Q Consensus 488 f~eRL~~eL~~~~-----------p~~~~i~~V~v~~~~~d~~~~aW~GgSIla~L~~f~-~~wItr~eYee~G~~i~~~ 555 (574)
|.+||++||..+. |... +|+|.. +.+|.+++|+||||+|+|++|+ ++||||+||+|+|++++||
T Consensus 313 ~~~rl~~el~~~~~~~~~~~~~~~p~~~---~v~v~~-~~~~~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 313 LPSRLERELKQLYLERVLKGDVEKLSKF---KIRIED-PPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp HHHHHHHHHHHHHHHHTCSSCCCTTCCC---CC-----------------------------------------------
T ss_pred HHHHHHHHHHHHHhhhhcccccCCCCce---EEEEec-CCCcceeEEhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence 9999999999877 6544 346654 3588999999999999999999 9999999999999999976
No 6
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=1e-66 Score=552.51 Aligned_cols=367 Identities=20% Similarity=0.364 Sum_probs=299.2
Q ss_pred CCCeEEEcCCCceeeeecCCCCCC-CccceeeeeecCCCCCcchhhHhhhhcCCCCcchhhhcCCcccccccccchhccc
Q 008184 17 GSNLVVINPGSANIRIGLAQHDTP-LNIPHCIARRTSQVPKRNVVDQIASLMKIPFLDEEVANNSFPRKMGRVDAFNQQN 95 (574)
Q Consensus 17 ~~~~iVi~~GS~~lkiG~a~d~~P-~~iP~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (574)
..++||||+||+++|+|+|++..| .++||+||+++..... . +
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~--------------------~------------~----- 46 (375)
T 2fxu_A 4 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVM--------------------V------------G----- 46 (375)
T ss_dssp CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC----------------------------------------
T ss_pred CCceEEEECCCCeEEEEECCCCCCceeeccccccccccccc--------------------c------------C-----
Confidence 458999999999999999999999 5899999997653100 0 0
Q ss_pred ccccccccccccccCCCCCCCccccccccccCCCccccCCCCCCccccccccccCCCceEEccccccCCCCCCceEecce
Q 008184 96 SRKDVAFSWTNVYEKEPMPSTALESSSSMNHGIIKESMGQHRNTDIKELNSSERKFREFICGEEALRVSPTEPYCIHRPI 175 (574)
Q Consensus 96 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~n~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~vG~eal~~~~~~~~~l~~Pi 175 (574)
...++++||++|... ++.+.+++||
T Consensus 47 -----------------------------------------------------~~~~~~~vG~~a~~~--~~~~~~~~Pi 71 (375)
T 2fxu_A 47 -----------------------------------------------------MGQKDSYVGDEAQSK--RGILTLKYPI 71 (375)
T ss_dssp ---------------------------------------------------------CCEEHHHHHHH--TTSEEEECSE
T ss_pred -----------------------------------------------------CCCCCeEechhHhhc--Ccccceeccc
Confidence 011457999999887 3579999999
Q ss_pred ecCeeeecCCCChhhcHHHHHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHHHHH-HHHHHHHhcCCCeEEEehhh
Q 008184 176 RRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREIKE-MLSIVLRDLRFASAVVHQEG 254 (574)
Q Consensus 176 ~~G~i~~~~~~s~~~~~dd~e~iw~~~~~~~L~i~~~~~~~~~~VLv~e~~~~~~~~r~-~~eilFE~~~~~~v~~~~~s 254 (574)
++|.+. ||+++|.||+|+|++.|+++++++ +|++++|++++...|+ +++++||.||++++++++++
T Consensus 72 ~~G~i~---------d~d~~e~i~~~~~~~~L~~~~~~~----~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~ 138 (375)
T 2fxu_A 72 EHGIIT---------NWDDMEKIWHHTFYNELRVAPEEH----PTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQA 138 (375)
T ss_dssp ETTEEC---------CHHHHHHHHHHHHHTTSCCCGGGS----CEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHH
T ss_pred cCCccc---------CHHHHHHHHHHHHHHhcCCCCcCC----cEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccch
Confidence 999998 999999999999988999998887 7999999888877775 99999999999999999999
Q ss_pred HHHHhhcCCceEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHHHHHHHHhcCCCCCcccccccccccHHHHHH
Q 008184 255 LAAVFGNGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTKAMDLLMLNR 334 (574)
Q Consensus 255 vla~ya~G~~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~L~~lL~~~~~~p~~~~~~l~~~~d~~l~e~ 334 (574)
+||+||+|+++|||||+|+++|+|+||+||+++.++..++++||+++|++|.++|+.++. ++....+...+++
T Consensus 139 ~aaa~a~g~~~~lVvDiG~gtt~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~-------~~~~~~~~~~~e~ 211 (375)
T 2fxu_A 139 VLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGY-------SFVTTAEREIVRD 211 (375)
T ss_dssp HHHHHHTTCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTC-------CCCSHHHHHHHHH
T ss_pred heeeeecCCCeEEEEEcCCCceEEeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCC-------CCCcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987642 3444457889999
Q ss_pred HHHhceeccCCccccccccccccCCCCCC-CceeEeeeecCCCCcCCCCcccCCCCCCCCCCCCCCCccccccCCccccC
Q 008184 335 IKESYCEIKEGEIDAVAVVHSYEDGMPPG-SHKTRLIALNVPPMGLFYPKLLVPDVYPPPPRSWFNDYEDMLEDTWHTDF 413 (574)
Q Consensus 335 lKe~~c~v~~~~~~~~~~~~~y~~~~p~~-~~k~~~~~~~~ap~~lf~p~~~~~e~~~~p~~~~~~d~~d~~~d~~~~~~ 413 (574)
||+++|+++.+. .. ...... +..+ ...+ .++|+..+.+
T Consensus 212 iK~~~~~v~~~~-~~--e~~~~~--~~~~~~~~~------------------------------------~lpdg~~i~i 250 (375)
T 2fxu_A 212 IKEKLCYVALDF-EN--EMATAA--SSSSLEKSY------------------------------------ELPDGQVITI 250 (375)
T ss_dssp HHHHHCCCCSSH-HH--HHHHHH--HCSTTCEEE------------------------------------ECTTSCEEEE
T ss_pred HHHHHHhhcccH-HH--HHHhhc--ccCccCeEE------------------------------------ECCCCCEEEE
Confidence 999999997531 10 000000 0000 0000 0223333334
Q ss_pred C-CCCCCCCCCC-CCCCCCCCCCCCCCccCCCCCccccCCHHHHHHHHHHcCCChhHHHHHhcCeEEEcCCCCcCChHHH
Q 008184 414 P-RRSDISDNFY-PGINVGLPMWESYPVLTTKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPA 491 (574)
Q Consensus 414 ~-er~~~~E~lF-~~~~g~~~~~~~~~~~~~~~~~~~~~gL~e~I~~sI~~~~~~d~r~~L~~NIvL~GG~S~ipGf~eR 491 (574)
+ +||.++|.|| |..++ .+..+|+++|.++|.+| |.|+|+.|++||+||||+|++|||.+|
T Consensus 251 ~~erf~~~E~lf~p~~~~-----------------~~~~~i~~~i~~~i~~~-~~~~~~~l~~~IvLtGG~s~~pG~~~r 312 (375)
T 2fxu_A 251 GNERFRCPETLFQPSFIG-----------------MESAGIHETTYNSIMKC-DIDIRKDLYANNVMSGGTTMYPGIADR 312 (375)
T ss_dssp STHHHHHHHTTTCGGGGT-----------------CCSCCHHHHHHHHHHTS-CHHHHHHHHTCEEEESGGGCSTTHHHH
T ss_pred ChhheechHhhCCCccCC-----------------CCCCCHHHHHHHHHHhC-CHHHHHHHHhCcEeeCCCCCCccHHHH
Confidence 3 6888999999 44443 35679999999999999 999999999999999999999999999
Q ss_pred HHHHHhhhCCCCCCcceEEEcCCCCCCceeeEeceeeecccCCcccceeeHHHHHhcCCCceecccc
Q 008184 492 VEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLGILDFGRDAWIHREDWIRNGIHIGSGRKY 558 (574)
Q Consensus 492 L~~eL~~~~p~~~~i~~V~v~~~~~d~~~~aW~GgSIla~L~~f~~~wItr~eYee~G~~i~~~k~~ 558 (574)
|++||..+.|...++ +|.. +.+|.+++|+|||++|++++|+++||||+||+|+|++++||||+
T Consensus 313 l~~el~~~~p~~~~v---~v~~-~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 313 MQKEITALAPSTMKI---KIIA-PPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp HHHHHHHHSCTTCCC---CEEC-CTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred HHHHHHHhCCCCeeE---EEEc-CCCCCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhcc
Confidence 999999999876544 4443 35889999999999999999999999999999999999999995
No 7
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=4.3e-63 Score=532.10 Aligned_cols=380 Identities=20% Similarity=0.298 Sum_probs=295.7
Q ss_pred cCCCeEEEcCCCceeeeecCCCCCC-CccceeeeeecCCCCCcchhhHhhhhcCCCCcchhhhcCCcccccccccchhcc
Q 008184 16 RGSNLVVINPGSANIRIGLAQHDTP-LNIPHCIARRTSQVPKRNVVDQIASLMKIPFLDEEVANNSFPRKMGRVDAFNQQ 94 (574)
Q Consensus 16 ~~~~~iVi~~GS~~lkiG~a~d~~P-~~iP~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (574)
....+||||+||+++|+|+|++..| .++|+|||+++.... +..
T Consensus 3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~-----------------~~~------------------- 46 (418)
T 1k8k_A 3 GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKV-----------------GDQ------------------- 46 (418)
T ss_dssp CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-------------------------------------------
T ss_pred CCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccc-----------------ccc-------------------
Confidence 3568999999999999999999999 599999998764310 000
Q ss_pred cccccccccccccccCCCCCCCccccccccccCCCccccCCCCCCccccccccccCCCceEEccccccCCCCCCceEecc
Q 008184 95 NSRKDVAFSWTNVYEKEPMPSTALESSSSMNHGIIKESMGQHRNTDIKELNSSERKFREFICGEEALRVSPTEPYCIHRP 174 (574)
Q Consensus 95 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~n~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~vG~eal~~~~~~~~~l~~P 174 (574)
.+.. .. .+ ...++++||++|...+ ++.+++|
T Consensus 47 ---------~~~~----~~--~~-------------------------------~~~~~~~vG~~a~~~~---~~~~~~p 77 (418)
T 1k8k_A 47 ---------AQRR----VM--KG-------------------------------VDDLDFFIGDEAIEKP---TYATKWP 77 (418)
T ss_dssp -----------------CC--CT-------------------------------TGGGCEEEGGGGTSCT---TSEEECC
T ss_pred ---------cccc----cc--cc-------------------------------ccccCeEEChHHHhcC---CCEEecc
Confidence 0000 00 00 0114689999999874 5999999
Q ss_pred eecCeeeecCCCChhhcHHHHHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHHHHH-HHHHHHHhcCCCeEEEehh
Q 008184 175 IRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREIKE-MLSIVLRDLRFASAVVHQE 253 (574)
Q Consensus 175 i~~G~i~~~~~~s~~~~~dd~e~iw~~~~~~~L~i~~~~~~~~~~VLv~e~~~~~~~~r~-~~eilFE~~~~~~v~~~~~ 253 (574)
|++|.+. ||++++.||+|+|.+.|+++++++ +|++++|++++...|+ |.+++||.+|+++++++.+
T Consensus 78 i~~G~i~---------d~d~~e~i~~~~~~~~L~~~~~~~----~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~e 144 (418)
T 1k8k_A 78 IRHGIVE---------DWDLMERFMEQVIFKYLRAEPEDH----YFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQ 144 (418)
T ss_dssp EETTEES---------CHHHHHHHHHHHHHTTTCCCGGGC----CEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEH
T ss_pred ccCCEEC---------CHHHHHHHHHHHHHhccCCCCCCC----cEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEech
Confidence 9999998 999999999999988899998877 7888888887777775 9999999999999999999
Q ss_pred hHHHHhh---------cCCceEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHHHHHHHHhcCCCCCccccccc
Q 008184 254 GLAAVFG---------NGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILT 324 (574)
Q Consensus 254 svla~ya---------~G~~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~L~~lL~~~~~~p~~~~~~l~ 324 (574)
++||+|| .|. +|||||+|+++|+|+||++|+++.+++.++++||+++|++|.++|..++. ++.
T Consensus 145 p~aa~~a~~~~~~~~~~~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~-------~~~ 216 (418)
T 1k8k_A 145 AVLALAASWTSRQVGERTL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREV-------GIP 216 (418)
T ss_dssp HHHHHHHGGGSTTCCSCCC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCC-------CCC
T ss_pred HHHHhhhhhcccccCCCCC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCC-------CCC
Confidence 9999999 566 99999999999999999999999999999999999999999999987642 344
Q ss_pred ccccHHHHHHHHHhceeccCCccccccccccccCCCCCC-CceeEeeeecCCCCcCCCCcccCCCCCCCCCCCCCCCccc
Q 008184 325 KAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPG-SHKTRLIALNVPPMGLFYPKLLVPDVYPPPPRSWFNDYED 403 (574)
Q Consensus 325 ~~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~y~~~~p~~-~~k~~~~~~~~ap~~lf~p~~~~~e~~~~p~~~~~~d~~d 403 (574)
...++..++++|+++|+++.+-.. ....+.. .+.. ...+.+. .+. ..
T Consensus 217 ~~~~~~~~e~iK~~~~~v~~~~~~---e~~~~~~-~~~~~~~~~~lp------d~~------~~---------------- 264 (418)
T 1k8k_A 217 PEQSLETAKAVKERYSYVCPDLVK---EFNKYDT-DGSKWIKQYTGI------NAI------SK---------------- 264 (418)
T ss_dssp GGGHHHHHHHHHHHHCCCCSCHHH---HHHHHHH-SGGGTCEEEEEE------CTT------TC----------------
T ss_pred CHHHHHHHHHHHHhhchhcccHHH---HHHhhcc-cccccceeEECC------CCC------CC----------------
Confidence 456789999999999999753110 0000000 0000 0011111 000 00
Q ss_pred cccCCccccCC-CCCCCCCCCC-CCCCCCCCCCCCCCccCCCCCccc-cCCHHHHHHHHHHcCCChhHHHHHhcCeEEEc
Q 008184 404 MLEDTWHTDFP-RRSDISDNFY-PGINVGLPMWESYPVLTTKPKKEE-KIGLAEAVTSSILSTGRIDLQRKLFCSIQLIG 480 (574)
Q Consensus 404 ~~~d~~~~~~~-er~~~~E~lF-~~~~g~~~~~~~~~~~~~~~~~~~-~~gL~e~I~~sI~~~~~~d~r~~L~~NIvL~G 480 (574)
....+.++ +||.++|.|| |...+ .+ ..+|+++|.++|.+| +.|+|+.+++||||+|
T Consensus 265 ---~~~~i~l~~erf~~~E~lF~P~~~~-----------------~~~~~~i~~~i~~si~~~-~~~~~~~l~~~IvL~G 323 (418)
T 1k8k_A 265 ---KEFSIDVGYERFLGPEIFFHPEFAN-----------------PDFTQPISEVVDEVIQNC-PIDVRRPLYKNIVLSG 323 (418)
T ss_dssp ---CEEEEEECTHHHHHHHTTTCGGGTC-----------------TTCCCCHHHHHHHHHHHS-CGGGTTHHHHCEEEES
T ss_pred ---cccEEEeChHHhhCcHhhCCCccCC-----------------CCCCCCHHHHHHHHHHcC-CHHHHHHHHhceEEeC
Confidence 00022333 6888899999 44333 23 368999999999999 9999999999999999
Q ss_pred CCCCcCChHHHHHHHHhhhC----------------CCCCCcceEEEcCCCCCCceeeEeceeeecccCCcccceeeHHH
Q 008184 481 GVALTGGLIPAVEERVLHAI----------------PSNEAIDMVEVLQSRTNPTYVSWKGGAVLGILDFGRDAWIHRED 544 (574)
Q Consensus 481 G~S~ipGf~eRL~~eL~~~~----------------p~~~~i~~V~v~~~~~d~~~~aW~GgSIla~L~~f~~~wItr~e 544 (574)
|+|++|||.+||++||..++ |... +|+|+. +.+|++++|+||||||++++|+++||||+|
T Consensus 324 G~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~---~v~v~~-~~~~~~~~w~Ggsilasl~~f~~~~itk~e 399 (418)
T 1k8k_A 324 GSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPI---DVQVIT-HHMQRYAVWFGGSMLASTPEFYQVCHTKKD 399 (418)
T ss_dssp GGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCC---CCCEEC-CTTCTTHHHHHHHHHTTSHHHHHHSEEHHH
T ss_pred CccccccHHHHHHHHHHHhhccccccccccccccCCCCce---eEEEeC-CCccccceeHhHHHHHcCccHhheEEEHHH
Confidence 99999999999999998875 3333 356664 458999999999999999999999999999
Q ss_pred HHhcCCCceecccc
Q 008184 545 WIRNGIHIGSGRKY 558 (574)
Q Consensus 545 Yee~G~~i~~~k~~ 558 (574)
|+|+|++++||||+
T Consensus 400 y~e~G~~~~~~~~~ 413 (418)
T 1k8k_A 400 YEEIGPSICRHNPV 413 (418)
T ss_dssp HHHHCGGGGGCCCC
T ss_pred HhhhCHHHHhhhcc
Confidence 99999999999774
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.97 E-value=8.2e-30 Score=266.11 Aligned_cols=277 Identities=16% Similarity=0.172 Sum_probs=193.4
Q ss_pred eEEccccccCCC--CCCceEecceecCeeeecCCCChhhcHHHHHHHHHHHHhhhcCCC-CCCCcccceeeecCC-CCCh
Q 008184 154 FICGEEALRVSP--TEPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIP-RSERNLYSAILVLPE-SFDN 229 (574)
Q Consensus 154 ~~vG~eal~~~~--~~~~~l~~Pi~~G~i~~~~~~s~~~~~dd~e~iw~~~~~~~L~i~-~~~~~~~~~VLv~e~-~~~~ 229 (574)
++||++|.+... ..+..+.+|+++|.+. +|+.++.+|.++|.+..... ..+. .++++.| .|+.
T Consensus 42 ~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~---------~~~~~~~i~~~~l~~~~~~~~~~~~----~~vitvP~~~~~ 108 (344)
T 1jce_A 42 LKVGLEAKNMIGKTPATIKAIRPMRDGVIA---------DYTVALVMLRYFINKAKGGMNLFKP----RVVIGVPIGITD 108 (344)
T ss_dssp EEESHHHHTTTTCCCTTEEEECCEETTEES---------SHHHHHHHHHHHHHHHHTSCCSCCC----EEEEEECTTCCH
T ss_pred EEEcHHHHHhcccCCCCeEEEecCCCCeeC---------ChHHHHHHHHHHHHHHhhccccCCC----eEEEEECCCCCH
Confidence 578888876532 2467788999999988 99999999999996433322 2233 4666555 4555
Q ss_pred HHHHHHHHHHHHhcCCCeEEEehhhHHHHhhcCC-----ceEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHH
Q 008184 230 REIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGL-----STACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRC 304 (574)
Q Consensus 230 ~~~r~~~eilFE~~~~~~v~~~~~svla~ya~G~-----~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~ 304 (574)
.+.+.+.+ ++|.+|++.+.++.++++|++++|. .+.+|||+|+++|+|+++..|.++. ...+++||+++|+.
T Consensus 109 ~~r~~~~~-a~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~~--~~~~~lGG~~id~~ 185 (344)
T 1jce_A 109 VERRAILD-AGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVT--WESIRIAGDEMDEA 185 (344)
T ss_dssp HHHHHHHH-HHHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHH
T ss_pred HHHHHHHH-HHHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEEe--eCCCCccChhHHHH
Confidence 54334555 6899999999999999999999986 6899999999999999999998874 46789999999999
Q ss_pred HHHHHHhcCCCCCcccccccccccHHHHHHHHHhceeccCCccccccccccccCCCCCCC-ceeEeeeecCCCCcCCCCc
Q 008184 305 LLWTQRHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGS-HKTRLIALNVPPMGLFYPK 383 (574)
Q Consensus 305 L~~lL~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~y~~~~p~~~-~k~~~~~~~~ap~~lf~p~ 383 (574)
|.+++..+. .+ ..+...+|++|+++|+..................+.++. ....+..
T Consensus 186 l~~~l~~~~--------~~--~~~~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~------------ 243 (344)
T 1jce_A 186 IVQYVRETY--------RV--AIGERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKG------------ 243 (344)
T ss_dssp HHHHHHHHH--------CE--ECCHHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEH------------
T ss_pred HHHHHHHHh--------Cc--ccCHHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeH------------
Confidence 999886541 11 234678999999999875321000000000000000110 0000000
Q ss_pred ccCCCCCCCCCCCCCCCccccccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCccccCCHHHHHHHHHHcC
Q 008184 384 LLVPDVYPPPPRSWFNDYEDMLEDTWHTDFPRRSDISDNFYPGINVGLPMWESYPVLTTKPKKEEKIGLAEAVTSSILST 463 (574)
Q Consensus 384 ~~~~e~~~~p~~~~~~d~~d~~~d~~~~~~~er~~~~E~lF~~~~g~~~~~~~~~~~~~~~~~~~~~gL~e~I~~sI~~~ 463 (574)
+++ +.+|.+ ....+.+.|.++|.+|
T Consensus 244 -------------------------------~~~---~~~~~~---------------------~~~~i~~~i~~~l~~~ 268 (344)
T 1jce_A 244 -------------------------------GEV---REALRS---------------------VVVAIVESVRTTLEKT 268 (344)
T ss_dssp -------------------------------HHH---HHHTHH---------------------HHHHHHHHHHHHHHTS
T ss_pred -------------------------------HHH---HHHHHH---------------------HHHHHHHHHHHHHHhC
Confidence 000 001110 1235889999999998
Q ss_pred CChhHHHHHh-cCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeeEeceeeecc-cCCcc
Q 008184 464 GRIDLQRKLF-CSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLGI-LDFGR 536 (574)
Q Consensus 464 ~~~d~r~~L~-~NIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~i~~V~v~~~~~d~~~~aW~GgSIla~-L~~f~ 536 (574)
+.++++.++ ++|+|+||+|++|||.++|++++.. +|.+. .+|.+++|.||++++. +++|+
T Consensus 269 -~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~---------~v~~~---~~p~~ava~Gaa~~a~~~~~~~ 330 (344)
T 1jce_A 269 -PPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGI---------SVIRS---EEPLTAVAKGAGMVLDKVNILK 330 (344)
T ss_dssp -CHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSS---------CEEEC---SSTTTHHHHHHHHGGGCHHHHT
T ss_pred -CchhccchhhCcEEEECccccchHHHHHHHHHHCC---------Ccccc---CChHHHHHHHHHHHHhChHHHH
Confidence 888888888 7999999999999999999999942 23443 4778999999999998 46663
No 9
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.73 E-value=6.7e-18 Score=169.82 Aligned_cols=213 Identities=17% Similarity=0.147 Sum_probs=157.1
Q ss_pred cceecCeeeecCCCChhhcHHHHHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeh
Q 008184 173 RPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREIKEMLSIVLRDLRFASAVVHQ 252 (574)
Q Consensus 173 ~Pi~~G~i~~~~~~s~~~~~dd~e~iw~~~~~~~L~i~~~~~~~~~~VLv~e~~~~~~~~r~~~eilFE~~~~~~v~~~~ 252 (574)
.|+++|.+. ||+.++.+|++++.........+.. .++++.+.......++.++.+++.+|++...+..
T Consensus 60 ~~l~~g~i~---------d~~~~~~~l~~~~~~~~~~~~~~~~---~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~ 127 (272)
T 3h1q_A 60 SVVKDGLVV---------DYIGAIQIVRELKAKVERLLGSELF---QAATAIPPGTVGRNAEACGHVVAGAGLELVTLVD 127 (272)
T ss_dssp CCCBTTBCT---------THHHHHHHHHHHHHHHHHHSSSCCC---EEEEECCSCC---CTTHHHHHHHHTTCEEEEEEC
T ss_pred cccCCCEEE---------cHHHHHHHHHHHHHHHHHhcCCccC---eEEEEcCCCCCHHHHHHHHHHHHHcCCeeeeccc
Confidence 488999998 9999999999998643322112221 3445544443333346788899999999999999
Q ss_pred hhHHHHhhcCCceEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHHHHHHHHhcCCCCCcccccccccccHHHH
Q 008184 253 EGLAAVFGNGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTKAMDLLML 332 (574)
Q Consensus 253 ~svla~ya~G~~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~L~~lL~~~~~~p~~~~~~l~~~~d~~l~ 332 (574)
++.++++++|..+++|||+|++.|.++++.+|.++. ...+++||.++|+.+.+.+. .+.+.+
T Consensus 128 e~~A~a~~~~~~~~~viDiGggst~~~~~~~g~~~~--~~~~~~Gg~~~~~~l~~~l~----------------~~~~~a 189 (272)
T 3h1q_A 128 EPVAAARALGINDGIVVDIGGGTTGIAVIEKGKITA--TFDEPTGGTHLSLVLAGSYK----------------IPFEEA 189 (272)
T ss_dssp HHHHHHHHHTCSSEEEEEECSSCEEEEEEETTEEEE--ECCBSCCHHHHHHHHHHHHT----------------CCHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECCCcEEEEEEECCEEEE--EecCCCcHHHHHHHHHHHhC----------------CCHHHH
Confidence 999999999999999999999999999999999884 46789999999999988763 134678
Q ss_pred HHHHHhceeccCCccccccccccccCCCCCCCceeEeeeecCCCCcCCCCcccCCCCCCCCCCCCCCCccccccCCcccc
Q 008184 333 NRIKESYCEIKEGEIDAVAVVHSYEDGMPPGSHKTRLIALNVPPMGLFYPKLLVPDVYPPPPRSWFNDYEDMLEDTWHTD 412 (574)
Q Consensus 333 e~lKe~~c~v~~~~~~~~~~~~~y~~~~p~~~~k~~~~~~~~ap~~lf~p~~~~~e~~~~p~~~~~~d~~d~~~d~~~~~ 412 (574)
+++|+++|.-. .+. + +..
T Consensus 190 e~~k~~~~~~~-----------~~~-------------~-------~~~------------------------------- 207 (272)
T 3h1q_A 190 ETIKKDFSRHR-----------EIM-------------R-------VVR------------------------------- 207 (272)
T ss_dssp HHHHHSSTTHH-----------HHH-------------H-------HHH-------------------------------
T ss_pred HHHHHhcCCHH-----------HHH-------------H-------HHH-------------------------------
Confidence 99998765100 000 0 000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCccccCCHHHHHHHHHHcCCChhHHHHHhcCeEEEcCCCCcCChHHHH
Q 008184 413 FPRRSDISDNFYPGINVGLPMWESYPVLTTKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAV 492 (574)
Q Consensus 413 ~~er~~~~E~lF~~~~g~~~~~~~~~~~~~~~~~~~~~gL~e~I~~sI~~~~~~d~r~~L~~NIvL~GG~S~ipGf~eRL 492 (574)
.-...+.+.|.+++.++ + ...+|+|+||+|++|||.++|
T Consensus 208 ----------------------------------~~~~~i~~~i~~~l~~~-~------~~~~ivL~GG~a~~~~l~~~l 246 (272)
T 3h1q_A 208 ----------------------------------PVIEKMALIVKEVIKNY-D------QTLPVYVVGGTAYLTGFSEEF 246 (272)
T ss_dssp ----------------------------------HHHHHHHHHHHHHTTTS-C------SSCCEEEESGGGGSTTHHHHH
T ss_pred ----------------------------------HHHHHHHHHHHHHHHhc-C------CCCEEEEECCccchhhHHHHH
Confidence 00124677888888887 4 135999999999999999999
Q ss_pred HHHHhhhCCCCCCcceEEEcCCCCCCceeeEeceeeec
Q 008184 493 EERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLG 530 (574)
Q Consensus 493 ~~eL~~~~p~~~~i~~V~v~~~~~d~~~~aW~GgSIla 530 (574)
++++.. +|.+ +.+|.+++|+|++++|
T Consensus 247 ~~~l~~---------~v~~---~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 247 SRFLGK---------EVQV---PIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHHSS---------CCBC---CSSGGGHHHHHHHTTC
T ss_pred HHHhCC---------Cccc---cCChHHHHHHHHHhcC
Confidence 999942 1222 3578999999998765
No 10
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.70 E-value=1.6e-17 Score=182.11 Aligned_cols=224 Identities=17% Similarity=0.174 Sum_probs=138.9
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEehhhHHHHhhcCC-----ceEEEEEeCCCceEEEEee--CCee-ccCC
Q 008184 219 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGL-----STACVVNMGAQVTSVICVE--DGVA-LPNT 290 (574)
Q Consensus 219 ~VLv~e~~~~~~~~r~~~eilFE~~~~~~v~~~~~svla~ya~G~-----~tglVVDiG~~~T~V~pV~--dG~v-l~~s 290 (574)
.|+-+|..|+..+.+.+.+ +++..|++.+.++.++.+|++++|. .+.+|||+|+++|.|+.+. +|.. +..+
T Consensus 112 ~VitvPa~~~~~qr~a~~~-a~~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~ 190 (509)
T 2v7y_A 112 AVITVPAYFNDAQRQATKD-AGRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKAT 190 (509)
T ss_dssp EEEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHH-HHHHcCCCeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEe
Confidence 4555666666665444555 5699999999999999999999987 4789999999999999776 4653 2233
Q ss_pred ceeecccHHHHHHHHHHHHHhcCCCCCcccccccc-----cccHHHHHHHHHhceeccCCccccccccccccCCCCCCCc
Q 008184 291 EKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTK-----AMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGSH 365 (574)
Q Consensus 291 ~~~l~~GG~~it~~L~~lL~~~~~~p~~~~~~l~~-----~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~y~~~~p~~~~ 365 (574)
....++||+++|+.|.+++..+-.- .+ ..++.. ..-+..+|++|+.++......+.. ...+. .+++..
T Consensus 191 ~g~~~lGG~d~d~~l~~~l~~~~~~-~~-~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l---~~~~~--~~~G~~ 263 (509)
T 2v7y_A 191 AGDNHLGGDDFDQVIIDYLVNQFKQ-EH-GIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISL---PFISA--NENGPL 263 (509)
T ss_dssp EEETTCSHHHHHHHHHHHHHHHHHH-HH-SCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEE---EEEEE--ETTEEE
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHHH-Hh-CCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEE---ecccc--CCCCCe
Confidence 3457899999999998876542000 00 011111 011467889999887543211100 00000 000100
Q ss_pred --eeEeeeecCCCCcCCCCcccCCCCCCCCCCCCCCCccccccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCCC
Q 008184 366 --KTRLIALNVPPMGLFYPKLLVPDVYPPPPRSWFNDYEDMLEDTWHTDFPRRSDISDNFYPGINVGLPMWESYPVLTTK 443 (574)
Q Consensus 366 --k~~~~~~~~ap~~lf~p~~~~~e~~~~p~~~~~~d~~d~~~d~~~~~~~er~~~~E~lF~~~~g~~~~~~~~~~~~~~ 443 (574)
...+.. ++| |.+|.+
T Consensus 264 ~~~~~itr-------------------------------------------~~f---e~l~~~----------------- 280 (509)
T 2v7y_A 264 HLEMTLTR-------------------------------------------AKF---EELSAH----------------- 280 (509)
T ss_dssp EEEEEEEH-------------------------------------------HHH---HHHTHH-----------------
T ss_pred eEEEEEEH-------------------------------------------HHH---HHHHHH-----------------
Confidence 000000 000 001100
Q ss_pred CCccccCCHHHHHHHHHHcCCChhHHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeeE
Q 008184 444 PKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSW 523 (574)
Q Consensus 444 ~~~~~~~gL~e~I~~sI~~~~~~d~r~~L~~NIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~i~~V~v~~~~~d~~~~aW 523 (574)
-...+.+.|.+++..+ . +.....++|+|+||+|++|++.++|++++.. ++. ...+|..++|
T Consensus 281 ----~~~~i~~~i~~~L~~a-~--~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~---------~~~---~~~~p~~aVa 341 (509)
T 2v7y_A 281 ----LVERTMGPVRQALQDA-G--LTPADIDKVILVGGSTRIPAVQEAIKRELGK---------EPH---KGVNPDEVVA 341 (509)
T ss_dssp ----HHHTTHHHHHHHHHHH-T--CCGGGCSEEEEESGGGGCHHHHHHHHHHHSS---------CCB---CCSCTTTHHH
T ss_pred ----HHHHHHHHHHHHHHHc-C--CChhHCcEEEEECCcccChHHHHHHHHHhCC---------CcC---cCCCchhhhH
Confidence 0124667788888776 3 3344568999999999999999999999842 111 1347789999
Q ss_pred eceeeeccc
Q 008184 524 KGGAVLGIL 532 (574)
Q Consensus 524 ~GgSIla~L 532 (574)
.||+++|..
T Consensus 342 ~Gaa~~a~~ 350 (509)
T 2v7y_A 342 IGAAIQGGV 350 (509)
T ss_dssp HHHHHHHHH
T ss_pred hhHHHHHHH
Confidence 999999864
No 11
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.66 E-value=9.1e-17 Score=169.63 Aligned_cols=224 Identities=16% Similarity=0.116 Sum_probs=139.6
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEehhhHHHHhhcCCc------eEEEEEeCCCceEEEEeeCC------ee
Q 008184 219 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLS------TACVVNMGAQVTSVICVEDG------VA 286 (574)
Q Consensus 219 ~VLv~e~~~~~~~~r~~~eilFE~~~~~~v~~~~~svla~ya~G~~------tglVVDiG~~~T~V~pV~dG------~v 286 (574)
.|+-+|..|+..+.+.+.+ +++..|++.+.++.++++|++++|.. +.+|||+|+++|.|+.+..| ..
T Consensus 138 ~vitvP~~~~~~~r~~~~~-a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~ 216 (383)
T 1dkg_D 138 AVITVPAYFNDAQRQATKD-AGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTF 216 (383)
T ss_dssp EEECBCTTCCHHHHHHHHH-HHHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCC
T ss_pred EEEEECCCCCHHHHHHHHH-HHHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeE
Confidence 4555666666655444555 57999999999999999999988753 68999999999999987644 32
Q ss_pred cc-CCceeecccHHHHHHHHHHHHHhcCCCCCcccccccc-----cccHHHHHHHHHhceeccCCccccccccccccCCC
Q 008184 287 LP-NTEKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTK-----AMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGM 360 (574)
Q Consensus 287 l~-~s~~~l~~GG~~it~~L~~lL~~~~~~p~~~~~~l~~-----~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~y~~~~ 360 (574)
.. .+....++||+++|+.|.+++..+-.. .+ ..++.. ..-+..+|++|+.+|......+.. ...+. .
T Consensus 217 ~v~~~~~~~~lGG~~id~~l~~~l~~~~~~-~~-~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i---~~~~~--~ 289 (383)
T 1dkg_D 217 EVLATNGDTHLGGEDFDSRLINYLVEEFKK-DQ-GIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL---PYITA--D 289 (383)
T ss_dssp EEEEEEEESSCSHHHHHHHHHHHHHHHHHH-HH-CCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEE---EEEEE--E
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHHH-Hh-CCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEE---ecccc--c
Confidence 11 123447999999999999877543000 00 001110 012467899999988653211110 00000 1
Q ss_pred CCCCc--eeEeeeecCCCCcCCCCcccCCCCCCCCCCCCCCCccccccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008184 361 PPGSH--KTRLIALNVPPMGLFYPKLLVPDVYPPPPRSWFNDYEDMLEDTWHTDFPRRSDISDNFYPGINVGLPMWESYP 438 (574)
Q Consensus 361 p~~~~--k~~~~~~~~ap~~lf~p~~~~~e~~~~p~~~~~~d~~d~~~d~~~~~~~er~~~~E~lF~~~~g~~~~~~~~~ 438 (574)
+++.. ...+.. + ++ |.+|.+
T Consensus 290 ~~G~~~~~~~it~----------------~---------------------------~~---~~~~~~------------ 311 (383)
T 1dkg_D 290 ATGPKHMNIKVTR----------------A---------------------------KL---ESLVED------------ 311 (383)
T ss_dssp TTEEEEEEEEEEH----------------H---------------------------HH---HHHSHH------------
T ss_pred CCCCeeEEEEEeH----------------H---------------------------HH---HHHHHH------------
Confidence 11100 000000 0 00 001100
Q ss_pred ccCCCCCccccCCHHHHHHHHHHcCCChhHHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCC
Q 008184 439 VLTTKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNP 518 (574)
Q Consensus 439 ~~~~~~~~~~~~gL~e~I~~sI~~~~~~d~r~~L~~NIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~i~~V~v~~~~~d~ 518 (574)
....+.++|.++|.++ . +.+...++|+|+||+|++||+.++|++++.. ++.. +.+|
T Consensus 312 ---------~~~~i~~~i~~~l~~~-~--~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~---------~v~~---~~~p 367 (383)
T 1dkg_D 312 ---------LVNRSIELLKVALQDA-G--LSVSDIDDVILVGGQTRMPMVQKKVAEFFGK---------EPRK---DVNP 367 (383)
T ss_dssp ---------HHHHHHHHHHHHHHTT-T--CCTTTCCEEEEESGGGGSHHHHHHHHHHHSS---------CCBC---SSCT
T ss_pred ---------HHHHHHHHHHHHHHHc-C--CCHhhCCEEEEecCccccHHHHHHHHHHhCC---------CCCC---CcCh
Confidence 1125778888899887 3 3344568999999999999999999999942 1111 3578
Q ss_pred ceeeEeceeeeccc
Q 008184 519 TYVSWKGGAVLGIL 532 (574)
Q Consensus 519 ~~~aW~GgSIla~L 532 (574)
.+++|+||+++|.+
T Consensus 368 ~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 368 DEAVAIGAAVQGGV 381 (383)
T ss_dssp TTHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHh
Confidence 89999999999875
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.62 E-value=2.4e-16 Score=166.87 Aligned_cols=91 Identities=19% Similarity=0.238 Sum_probs=67.9
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEehhhHHHHhhcCCce------EEEEEeCCCceEEEEee--CCeeccCC
Q 008184 219 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLST------ACVVNMGAQVTSVICVE--DGVALPNT 290 (574)
Q Consensus 219 ~VLv~e~~~~~~~~r~~~eilFE~~~~~~v~~~~~svla~ya~G~~t------glVVDiG~~~T~V~pV~--dG~vl~~s 290 (574)
.|+-+|..|+..+.+.+.+ +.+..|++.+.++.++++|++++|... .+|||+|+++|.|+.+. +|..-..+
T Consensus 156 ~vitvP~~~~~~~r~~~~~-a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~ 234 (394)
T 3qfu_A 156 AVVTVPAYFNDAQRQATKD-AGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQA 234 (394)
T ss_dssp EEEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHH-HHHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEE
Confidence 4555666677666433444 559999999999999999999987643 49999999999877664 55432222
Q ss_pred -ceeecccHHHHHHHHHHHHH
Q 008184 291 -EKTLPFGGEDISRCLLWTQR 310 (574)
Q Consensus 291 -~~~l~~GG~~it~~L~~lL~ 310 (574)
....++||+++|+.|.+++.
T Consensus 235 ~~~~~~lGG~~~d~~l~~~l~ 255 (394)
T 3qfu_A 235 TSGDTHLGGEDFDYKIVRQLI 255 (394)
T ss_dssp EEEETTCSHHHHHHHHHHHHH
T ss_pred EcCCCCCChHHHHHHHHHHHH
Confidence 23479999999999988764
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.55 E-value=1.2e-15 Score=162.16 Aligned_cols=91 Identities=19% Similarity=0.281 Sum_probs=69.3
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEehhhHHHHhhcCCce---------EEEEEeCCCceEEEEee--CCee-
Q 008184 219 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLST---------ACVVNMGAQVTSVICVE--DGVA- 286 (574)
Q Consensus 219 ~VLv~e~~~~~~~~r~~~eilFE~~~~~~v~~~~~svla~ya~G~~t---------glVVDiG~~~T~V~pV~--dG~v- 286 (574)
.|+-+|..|+..+. +.+.-.++..|++.+.++.++.+|++++|... .+|||+|+++|.++.+. +|..
T Consensus 161 ~vitvPa~~~~~~r-~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~ 239 (404)
T 3i33_A 161 AVITVPAYFNDSQR-QATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFE 239 (404)
T ss_dssp EEEEECTTCCHHHH-HHHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred EEEEECCCCCHHHH-HHHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEE
Confidence 46666777777664 44444589999999999999999999987543 49999999999998774 4433
Q ss_pred ccCCceeecccHHHHHHHHHHHHH
Q 008184 287 LPNTEKTLPFGGEDISRCLLWTQR 310 (574)
Q Consensus 287 l~~s~~~l~~GG~~it~~L~~lL~ 310 (574)
+.......++||+++|+.|.+.+.
T Consensus 240 v~~~~~~~~lGG~~~d~~l~~~l~ 263 (404)
T 3i33_A 240 VKSTAGDTHLGGEDFDNRMVSHLA 263 (404)
T ss_dssp EEEEEEETTCSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHH
Confidence 222334479999999999988763
No 14
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.27 E-value=3.3e-11 Score=133.28 Aligned_cols=91 Identities=18% Similarity=0.243 Sum_probs=71.5
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEehhhHHHHhhcCC-------ceEEEEEeCCCceEEEEee--CCee-cc
Q 008184 219 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGL-------STACVVNMGAQVTSVICVE--DGVA-LP 288 (574)
Q Consensus 219 ~VLv~e~~~~~~~~r~~~eilFE~~~~~~v~~~~~svla~ya~G~-------~tglVVDiG~~~T~V~pV~--dG~v-l~ 288 (574)
.|+-+|..|+..+.+.+. -+++..|++.+.++.++.+|++++|. .+.+|+|+|+++|.|+.+. +|.. +.
T Consensus 142 ~VitVPa~f~~~qr~a~~-~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~ 220 (554)
T 1yuw_A 142 AVVTVPAYFNDSQRQATK-DAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVK 220 (554)
T ss_dssp EEEEECTTCCHHHHHHHH-HHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEE
T ss_pred EEEEECCCCCHHHHHHHH-HHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEE
Confidence 566677778876643344 47789999999999999999988874 4689999999999999886 6754 22
Q ss_pred CCceeecccHHHHHHHHHHHHH
Q 008184 289 NTEKTLPFGGEDISRCLLWTQR 310 (574)
Q Consensus 289 ~s~~~l~~GG~~it~~L~~lL~ 310 (574)
.+.....+||+++|+.|.+.+.
T Consensus 221 a~~g~~~lGG~d~d~~l~~~l~ 242 (554)
T 1yuw_A 221 STAGDTHLGGEDFDNRMVNHFI 242 (554)
T ss_dssp EEEEETTCSHHHHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHH
Confidence 3344578999999999987664
No 15
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.24 E-value=1.7e-11 Score=136.84 Aligned_cols=110 Identities=20% Similarity=0.248 Sum_probs=77.9
Q ss_pred HHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHHHHHHHHHHHHhcCCCeEEEehhhHHHHhhcCCc------eEEE
Q 008184 195 LYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLS------TACV 268 (574)
Q Consensus 195 ~e~iw~~~~~~~L~i~~~~~~~~~~VLv~e~~~~~~~~r~~~eilFE~~~~~~v~~~~~svla~ya~G~~------tglV 268 (574)
+..+++.+- ..|+.+.. . .|+-+|..|+..+ |+.+.-+.+..|+..+.++.++.+|++++|.. +.+|
T Consensus 120 L~~l~~~ae-~~l~~~v~-~----~VitVPa~f~d~q-r~a~~~A~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV 192 (605)
T 2kho_A 120 LKKMKKTAE-DYLGEPVT-E----AVITVPAYFNDAQ-RQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAV 192 (605)
T ss_dssp HHHHHHHHH-HHHCSCCC-E----EEEEECTTCCHHH-HHHHHHHHHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEE
T ss_pred HHHHHHHHH-HHhCCCCc-E----EEEEECCCCCHHH-HHHHHHHHHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEE
Confidence 355555542 45654322 2 5777777777665 34444467889999999999999999988753 4799
Q ss_pred EEeCCCceEEEEee------CCee-ccCCceeecccHHHHHHHHHHHHHh
Q 008184 269 VNMGAQVTSVICVE------DGVA-LPNTEKTLPFGGEDISRCLLWTQRH 311 (574)
Q Consensus 269 VDiG~~~T~V~pV~------dG~v-l~~s~~~l~~GG~~it~~L~~lL~~ 311 (574)
+|+|+++|.|+.+. +|.. +..+....++||+++|+.|.+.+..
T Consensus 193 ~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~~ 242 (605)
T 2kho_A 193 YDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVE 242 (605)
T ss_dssp EEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHHH
T ss_pred EECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHHH
Confidence 99999999999886 4543 1122334689999999999876644
No 16
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.12 E-value=7.6e-11 Score=125.36 Aligned_cols=111 Identities=16% Similarity=0.189 Sum_probs=78.9
Q ss_pred HHHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHHHHHHHHHHHHhcCCCeEEEehhhHHHHhhcCCc--------e
Q 008184 194 DLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLS--------T 265 (574)
Q Consensus 194 d~e~iw~~~~~~~L~i~~~~~~~~~~VLv~e~~~~~~~~r~~~eilFE~~~~~~v~~~~~svla~ya~G~~--------t 265 (574)
.++.+++++- ..++.+.. . .|+-+|..|+..+. +.+.-..+..|+..+.++.++.+|+++++.. +
T Consensus 134 ~L~~l~~~a~-~~~~~~~~-~----~vitvPa~~~~~~r-~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~ 206 (409)
T 4gni_A 134 YLRRLVGAAS-EYLGKKVT-S----AVITIPTNFTEKQK-AALIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKI 206 (409)
T ss_dssp HHHHHHHHHH-HHHTSCCC-E----EEEEECTTCCHHHH-HHHHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEE
T ss_pred HHHHHHHHHH-HHhCCCCC-e----EEEEECCCCCHHHH-HHHHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCE
Confidence 3455666553 45554322 2 57778888887663 4455567888999999999999999998764 4
Q ss_pred EEEEEeCCCceEEEEe--eCCeec-cCCceeecccHHHHHHHHHHHHHh
Q 008184 266 ACVVNMGAQVTSVICV--EDGVAL-PNTEKTLPFGGEDISRCLLWTQRH 311 (574)
Q Consensus 266 glVVDiG~~~T~V~pV--~dG~vl-~~s~~~l~~GG~~it~~L~~lL~~ 311 (574)
.+|||+|+++|.++-+ .+|..- ..+....++||+++|+.|.+.+..
T Consensus 207 vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~ 255 (409)
T 4gni_A 207 IVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSK 255 (409)
T ss_dssp EEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHH
Confidence 8999999999999875 344321 111224799999999999887654
No 17
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.04 E-value=1.8e-09 Score=113.38 Aligned_cols=90 Identities=20% Similarity=0.347 Sum_probs=71.3
Q ss_pred HHHHHHhcCCCeEEEehhhHHHHhhcCC-------ceEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHHHHHH
Q 008184 236 LSIVLRDLRFASAVVHQEGLAAVFGNGL-------STACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWT 308 (574)
Q Consensus 236 ~eilFE~~~~~~v~~~~~svla~ya~G~-------~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~L~~l 308 (574)
+.-+++..|+.-..+..+++++++++|. .+.+|||+|+++|.|+.+.+|.++. ...+++||+++|+.+.+.
T Consensus 156 ~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~--~~~~~~GG~~i~~~i~~~ 233 (377)
T 2ych_A 156 VLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLA--VRVLTLSGKDFTEAIARS 233 (377)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHHHHHH
T ss_pred HHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEE--EEeeechHHHHHHHHHHH
Confidence 3446689999999999999999888642 3469999999999999999999874 457899999999998863
Q ss_pred HHhcCCCCCcccccccccccHHHHHHHHHhceecc
Q 008184 309 QRHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIK 343 (574)
Q Consensus 309 L~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~ 343 (574)
+ + .+...+|++|+++++..
T Consensus 234 ~---~-------------~~~~~aE~~K~~~~~~~ 252 (377)
T 2ych_A 234 F---N-------------LDLLAAEEVKRTYGMAT 252 (377)
T ss_dssp T---T-------------CCHHHHHHHHHHTC---
T ss_pred h---C-------------CCHHHHHHHHhhccccc
Confidence 2 1 13567999999988654
No 18
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=98.97 E-value=8.4e-10 Score=124.47 Aligned_cols=91 Identities=14% Similarity=0.174 Sum_probs=70.3
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEehhhHHHHhhcCC------------ceEEEEEeCCCceEEEEee--CC
Q 008184 219 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGL------------STACVVNMGAQVTSVICVE--DG 284 (574)
Q Consensus 219 ~VLv~e~~~~~~~~r~~~eilFE~~~~~~v~~~~~svla~ya~G~------------~tglVVDiG~~~T~V~pV~--dG 284 (574)
.|+-+|..|+..+. +.+.-..+..|++.+.++.++.+|++++|. .+.+|+|+|+++|.|+-+. +|
T Consensus 141 ~VITVPa~f~~~qR-~a~~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g 219 (675)
T 3d2f_A 141 VCIAVPPWYTEEQR-YNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKG 219 (675)
T ss_dssp EEEEECTTCCHHHH-HHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETT
T ss_pred EEEEECCCCCHHHH-HHHHHHHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCC
Confidence 56667777887664 444446688999999999999999887653 3589999999999998885 67
Q ss_pred ee-ccCCceeecccHHHHHHHHHHHHH
Q 008184 285 VA-LPNTEKTLPFGGEDISRCLLWTQR 310 (574)
Q Consensus 285 ~v-l~~s~~~l~~GG~~it~~L~~lL~ 310 (574)
.+ +..+..-..+||+++|+.|.+.+.
T Consensus 220 ~~~V~a~~gd~~lGG~d~D~~l~~~l~ 246 (675)
T 3d2f_A 220 QLKVLGTACDKHFGGRDFDLAITEHFA 246 (675)
T ss_dssp EEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred eEEEEEEcCCCCccHHHHHHHHHHHHH
Confidence 64 233333578999999999988764
No 19
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=98.96 E-value=1.3e-08 Score=113.67 Aligned_cols=110 Identities=21% Similarity=0.234 Sum_probs=77.7
Q ss_pred HHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHHHHHHHHHHHHhcCCCeEEEehhhHHHHhhcCC------ceEEE
Q 008184 195 LYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGL------STACV 268 (574)
Q Consensus 195 ~e~iw~~~~~~~L~i~~~~~~~~~~VLv~e~~~~~~~~r~~~eilFE~~~~~~v~~~~~svla~ya~G~------~tglV 268 (574)
+..+.+.+- ..|+.+..+ .|+-+|..|+..+ |+.+.-..+..|++.+.++.++.+|++++|. .+-+|
T Consensus 120 L~~lk~~ae-~~lg~~v~~-----~VITVPa~f~~~q-r~a~~~Aa~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV 192 (605)
T 4b9q_A 120 LKKMKKTAE-DYLGEPVTE-----AVITVPAYFNDAQ-RQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAV 192 (605)
T ss_dssp HHHHHHHHH-HHHTSCCCE-----EEEEECTTCCHHH-HHHHHHHHHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEE
T ss_pred HHHHHHHHH-HHhCCCCCe-----EEEEECCCCCHHH-HHHHHHHHHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEE
Confidence 344444442 566654332 5777777888766 4556667788999999999999999988764 35699
Q ss_pred EEeCCCceEEEEeeCCe------e-ccCCceeecccHHHHHHHHHHHHHh
Q 008184 269 VNMGAQVTSVICVEDGV------A-LPNTEKTLPFGGEDISRCLLWTQRH 311 (574)
Q Consensus 269 VDiG~~~T~V~pV~dG~------v-l~~s~~~l~~GG~~it~~L~~lL~~ 311 (574)
+|+|++++.|+-+.-+- . +..+..-..+||+++|+.|.+.+..
T Consensus 193 ~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~ 242 (605)
T 4b9q_A 193 YDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVE 242 (605)
T ss_dssp EEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred EECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHH
Confidence 99999999999875432 1 1112223578999999999876653
No 20
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=98.80 E-value=9.9e-09 Score=106.70 Aligned_cols=137 Identities=15% Similarity=0.167 Sum_probs=94.6
Q ss_pred CceEEccccccCCCCCCceEecceecCeeeecCCCChhhcHHHHHHHHHHHHhhhcC-CCCCCCccccee--eecCCCCC
Q 008184 152 REFICGEEALRVSPTEPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLH-IPRSERNLYSAI--LVLPESFD 228 (574)
Q Consensus 152 ~~~~vG~eal~~~~~~~~~l~~Pi~~G~i~~~~~~s~~~~~dd~e~iw~~~~~~~L~-i~~~~~~~~~~V--Lv~e~~~~ 228 (574)
+.++||++|. +|+..|.+. + +..+.++.+++.+... -..... +.| +-+|..+.
T Consensus 78 ~~~~vG~~A~-----------~~l~~~~~~---------~-~~~~~ll~~~l~~~~~~~~~~~~---~vvL~i~vP~~~~ 133 (346)
T 2fsj_A 78 GKYASGNNIR-----------VPQGDGRLA---------S-KEAFPLIAAALWESGIHNDGSPV---DLVIGSGTPLGTF 133 (346)
T ss_dssp GGGCCSSCCB-----------CCSSTTCTT---------S-TTTHHHHHHHHHHHCCCC---CE---EEEEEEEECGGGH
T ss_pred cEEEEcccee-----------cccCCCccc---------C-hhHHHHHHHHHHHhhhccCCCce---EEEEcccCCHHHH
Confidence 5678999888 588888876 6 6677788888864431 111111 234 33444444
Q ss_pred hHHHHHHHHHHHHh-------------cCCCeEEEehhhHHHHhhc--CC------ceEEEEEeCCCceEEEEee--CCe
Q 008184 229 NREIKEMLSIVLRD-------------LRFASAVVHQEGLAAVFGN--GL------STACVVNMGAQVTSVICVE--DGV 285 (574)
Q Consensus 229 ~~~~r~~~eilFE~-------------~~~~~v~~~~~svla~ya~--G~------~tglVVDiG~~~T~V~pV~--dG~ 285 (574)
..+.+.+.+.+... +++..+.+++|+.+|++++ +. .+.+|||+|+++|.|+-+. +|.
T Consensus 134 ~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~ 213 (346)
T 2fsj_A 134 DLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME 213 (346)
T ss_dssp HHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE
T ss_pred HHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCE
Confidence 44433455554332 2357799999999999985 31 3459999999999999998 887
Q ss_pred eccCCceeecccHHHHHHHHHHHHHhc
Q 008184 286 ALPNTEKTLPFGGEDISRCLLWTQRHH 312 (574)
Q Consensus 286 vl~~s~~~l~~GG~~it~~L~~lL~~~ 312 (574)
.+......+++||+++++.+.+.++++
T Consensus 214 ~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 214 PVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp ECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred EEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 665556788999999999999877654
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=98.75 E-value=9.1e-08 Score=101.92 Aligned_cols=89 Identities=16% Similarity=0.143 Sum_probs=73.7
Q ss_pred HHHHHHhcCCCeEEEehhhHHHHhhcCC-----ceEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHHHHHHHH
Q 008184 236 LSIVLRDLRFASAVVHQEGLAAVFGNGL-----STACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQR 310 (574)
Q Consensus 236 ~eilFE~~~~~~v~~~~~svla~ya~G~-----~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~L~~lL~ 310 (574)
..-+++..|+.-..+..+|++|+++++. .+.+|||+|+++|.|+-+.+|.+.. ...+++||+++|+.+...+.
T Consensus 173 ~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~--~~~i~~GG~~it~dIa~~l~ 250 (419)
T 4a2a_A 173 FYNFLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIK--ISYVPVGMKHVIKDVSAVLD 250 (419)
T ss_dssp HHHHHHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEE--EEEESCCHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEE--EEecccHHHHHHHHHHHHHC
Confidence 3346789999999999999999998865 3589999999999999999999875 35689999999999987542
Q ss_pred hcCCCCCcccccccccccHHHHHHHHHhceec
Q 008184 311 HHQTWPQIRTDILTKAMDLLMLNRIKESYCEI 342 (574)
Q Consensus 311 ~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v 342 (574)
...+.+|++|.++...
T Consensus 251 ----------------~~~~~AE~iK~~~g~a 266 (419)
T 4a2a_A 251 ----------------TSFEESERLIITHGNA 266 (419)
T ss_dssp ----------------CCHHHHHHHHHHHCCS
T ss_pred ----------------CCHHHHHHHHHHhccC
Confidence 1356799999987643
No 22
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=97.90 E-value=6e-05 Score=80.67 Aligned_cols=93 Identities=16% Similarity=0.210 Sum_probs=67.2
Q ss_pred HHHHHHHHHHhcCCCeEEEehhhHHHHhhc----CCc-eEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHHHH
Q 008184 232 IKEMLSIVLRDLRFASAVVHQEGLAAVFGN----GLS-TACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLL 306 (574)
Q Consensus 232 ~r~~~eilFE~~~~~~v~~~~~svla~ya~----G~~-tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~L~ 306 (574)
++.+.+.+=+.++.+-=.=.-++++|.+|+ ++. -.++||+|+++|+++-+.+|..+. ...+++||+++|..+.
T Consensus 370 m~NI~~cVer~~gL~veV~g~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~--a~~ip~gG~~VT~DIA 447 (610)
T 2d0o_A 370 MAMIAREIEQKLNIDVQIGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDII--ATHLAGAGDMVTMIIA 447 (610)
T ss_dssp HHHHHHHHHHHHCCEEEEEEEHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEE--EEEEECSHHHHHHHHH
T ss_pred HHHHHHHHHhccCCcceeccccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE--EEEeccchHHHHHHHH
Confidence 344555555555662111116788887776 333 479999999999999999998874 4569999999999999
Q ss_pred HHHHhcCCCCCcccccccccccHHHHHHHHHhceec
Q 008184 307 WTQRHHQTWPQIRTDILTKAMDLLMLNRIKESYCEI 342 (574)
Q Consensus 307 ~lL~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v 342 (574)
.-|.- .|+..+|+||. +...
T Consensus 448 ~~Lgt---------------~d~~~AErIK~-YG~A 467 (610)
T 2d0o_A 448 RELGL---------------EDRYLAEEIKK-YPLA 467 (610)
T ss_dssp HHHTC---------------CCHHHHHHHHH-SCEE
T ss_pred HHhCC---------------CCHHHHHHhcc-cCce
Confidence 87632 24788999999 6543
No 23
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=97.85 E-value=0.00014 Score=75.56 Aligned_cols=68 Identities=7% Similarity=0.102 Sum_probs=59.0
Q ss_pred CCeEEEehhhHHHHhhcCC-----------ceEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHHHHHHHHhc
Q 008184 245 FASAVVHQEGLAAVFGNGL-----------STACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRHH 312 (574)
Q Consensus 245 ~~~v~~~~~svla~ya~G~-----------~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~L~~lL~~~ 312 (574)
+..+.+.+|+++|+|+++. ...+|||+|+++|.++-+.+|.++......+++||..+++.+.+.++.+
T Consensus 154 I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 154 VKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK 232 (355)
T ss_dssp EEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred EEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence 4789999999999999862 3578999999999999998899988877889999999999999988654
No 24
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=97.81 E-value=3.4e-05 Score=82.82 Aligned_cols=73 Identities=22% Similarity=0.216 Sum_probs=58.6
Q ss_pred hhhHHHHhhc----CCc-eEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHHHHHHHHhcCCCCCccccccccc
Q 008184 252 QEGLAAVFGN----GLS-TACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTKA 326 (574)
Q Consensus 252 ~~svla~ya~----G~~-tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~L~~lL~~~~~~p~~~~~~l~~~ 326 (574)
-++++|.+|+ ++. -.++||+|+++|+++-+.+|..+. ...+++||+++|..+..-|.-
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~--a~~ip~gG~~VT~DIA~~Lg~--------------- 454 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQIT--AVHLAGAGNMVSLLIKTELGL--------------- 454 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEE--EEEEECCHHHHHHHHHHHHTC---------------
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE--EEEeccchHHHHHHHHHHhCC---------------
Confidence 6777787776 333 479999999999999999998874 456999999999999987632
Q ss_pred ccHHHHHHHHHhceec
Q 008184 327 MDLLMLNRIKESYCEI 342 (574)
Q Consensus 327 ~d~~l~e~lKe~~c~v 342 (574)
.|+..+|+||. +...
T Consensus 455 ~d~~~AErIK~-YG~A 469 (607)
T 1nbw_A 455 EDLSLAEAIKK-YPLA 469 (607)
T ss_dssp SCHHHHHHHHH-SCEE
T ss_pred CCHHHHHHhcc-cCce
Confidence 24788999999 6543
No 25
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=97.08 E-value=0.00053 Score=69.93 Aligned_cols=72 Identities=10% Similarity=0.117 Sum_probs=58.9
Q ss_pred HhcCCCeEEEehhhHHHHhhcC-----CceEEEEEeCCCceEEEEeeCCee-ccCCceeecccHHHHHHHHHHHHHhc
Q 008184 241 RDLRFASAVVHQEGLAAVFGNG-----LSTACVVNMGAQVTSVICVEDGVA-LPNTEKTLPFGGEDISRCLLWTQRHH 312 (574)
Q Consensus 241 E~~~~~~v~~~~~svla~ya~G-----~~tglVVDiG~~~T~V~pV~dG~v-l~~s~~~l~~GG~~it~~L~~lL~~~ 312 (574)
+.++|..+.+..++++|+++.+ ..+.+|||+|+++|.++-+.+|.+ +..+...+++||+++++.+.+.+...
T Consensus 136 ~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~ 213 (320)
T 2zgy_A 136 DTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLA 213 (320)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCC
T ss_pred cEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHc
Confidence 3456788999999999998764 246899999999999999999876 44345677999999999999887643
No 26
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=96.81 E-value=0.0012 Score=67.58 Aligned_cols=67 Identities=13% Similarity=0.125 Sum_probs=57.9
Q ss_pred CCeEEEehhhHHHHhhcC----CceEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHHHHHHHHh
Q 008184 245 FASAVVHQEGLAAVFGNG----LSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRH 311 (574)
Q Consensus 245 ~~~v~~~~~svla~ya~G----~~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~L~~lL~~ 311 (574)
+..+.+.+|++.|+|... ..+.+|||+|+++|.++.+.+|.++......+++||+++++.+.+.++.
T Consensus 149 I~~v~v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 149 ITDITIKAEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp EEEEEEEEHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS
T ss_pred EeEEEEEeccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh
Confidence 467999999999998762 2567999999999999999999998776678999999999999877654
No 27
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=85.41 E-value=1.2 Score=45.01 Aligned_cols=70 Identities=24% Similarity=0.302 Sum_probs=48.6
Q ss_pred HHHHHHHHhcCCCeEEEe---hhhHHHHhh----cC-CceEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHHH
Q 008184 234 EMLSIVLRDLRFASAVVH---QEGLAAVFG----NG-LSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCL 305 (574)
Q Consensus 234 ~~~eilFE~~~~~~v~~~---~~svla~ya----~G-~~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~L 305 (574)
++++.+-+..|++ +-++ .++.++..| .+ ..+++|||||.++|.++-+.+|.+. ....+++|+-.+++.+
T Consensus 101 ~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~~G~v~l~e~~ 177 (315)
T 1t6c_A 101 EFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIGIVNLTETF 177 (315)
T ss_dssp HHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEE--EEEEECCCHHHHHHHH
T ss_pred HHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCcee--eEEEEeccHHHHHHHh
Confidence 4566666666765 3333 223333222 23 5579999999999999999988875 4567999999999876
Q ss_pred H
Q 008184 306 L 306 (574)
Q Consensus 306 ~ 306 (574)
.
T Consensus 178 ~ 178 (315)
T 1t6c_A 178 F 178 (315)
T ss_dssp C
T ss_pred c
Confidence 3
No 28
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=83.93 E-value=0.74 Score=46.58 Aligned_cols=25 Identities=24% Similarity=0.501 Sum_probs=23.4
Q ss_pred ceEEEEEeCCCceEEEEeeCCeecc
Q 008184 264 STACVVNMGAQVTSVICVEDGVALP 288 (574)
Q Consensus 264 ~tglVVDiG~~~T~V~pV~dG~vl~ 288 (574)
.++++||||+++|.|+|+.+|.++.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 5799999999999999999999975
No 29
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=83.11 E-value=0.2 Score=49.36 Aligned_cols=66 Identities=20% Similarity=0.309 Sum_probs=45.1
Q ss_pred CHHHHHHHHHHcCCChhHHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeeEeceeeec
Q 008184 451 GLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLG 530 (574)
Q Consensus 451 gL~e~I~~sI~~~~~~d~r~~L~~NIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~i~~V~v~~~~~d~~~~aW~GgSIla 530 (574)
++.++|.+.+... -.+....+.|+|+||.|..|++.++|++++.. ++.+ |.+|.+.+=+||+++|
T Consensus 188 ~~~~~v~~~l~~~---~~~~~~~~~vvl~GGva~n~~lr~~l~~~~g~---------~~~~---p~~p~~~~A~GAAl~A 252 (276)
T 4ehu_A 188 GIHTSVAKRVSSL---VKRIGVQRNVVMVGGVARNSGIVRAMAREINT---------EIIV---PDIPQLTGALGAALYA 252 (276)
T ss_dssp HHHHHHHHHHHHH---HHHHCCCSSEEEESGGGGCHHHHHHHHHHHTS---------CEEC---CSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---HHhcccCCeEEEecCccchHHHHHHHHHHHCC---------Ceee---CCCcchHHHHHHHHHH
Confidence 4555555555332 23344457899999999999999999887731 2333 2366777778999887
Q ss_pred c
Q 008184 531 I 531 (574)
Q Consensus 531 ~ 531 (574)
.
T Consensus 253 ~ 253 (276)
T 4ehu_A 253 F 253 (276)
T ss_dssp H
T ss_pred H
Confidence 4
No 30
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=80.36 E-value=1.9 Score=43.43 Aligned_cols=69 Identities=12% Similarity=0.188 Sum_probs=48.4
Q ss_pred HHHHHHHHhcCCCeEEEe---hhhHHHHhhc----C--CceEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHH
Q 008184 234 EMLSIVLRDLRFASAVVH---QEGLAAVFGN----G--LSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRC 304 (574)
Q Consensus 234 ~~~eilFE~~~~~~v~~~---~~svla~ya~----G--~~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~ 304 (574)
++++-+-+..|++ +-++ .|+-++..|. . ...++|||||.++|.++-+.+|.+. ....+++|.--+|+.
T Consensus 93 ~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~e~ 169 (315)
T 3mdq_A 93 VLIDRIKKEVNID-VEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEIL--WKQSFEIGGQRLIDR 169 (315)
T ss_dssp HHHHHHHHHHCCC-EEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEE--EEEEESCCHHHHHHH
T ss_pred HHHHHHHHHHCCC-eEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEe--eeEEEechhhHHHHH
Confidence 4666666677775 3333 3443333332 2 2569999999999999999998776 456799999888876
Q ss_pred H
Q 008184 305 L 305 (574)
Q Consensus 305 L 305 (574)
+
T Consensus 170 f 170 (315)
T 3mdq_A 170 F 170 (315)
T ss_dssp S
T ss_pred h
Confidence 5
No 31
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=78.87 E-value=1.6 Score=44.45 Aligned_cols=42 Identities=14% Similarity=0.200 Sum_probs=33.2
Q ss_pred ceEEEEEeCCCceEEEEeeC--Ceec--cCCceeecccHHHHHHHH
Q 008184 264 STACVVNMGAQVTSVICVED--GVAL--PNTEKTLPFGGEDISRCL 305 (574)
Q Consensus 264 ~tglVVDiG~~~T~V~pV~d--G~vl--~~s~~~l~~GG~~it~~L 305 (574)
..++|||||+++|.++-+.+ +.+. ......+++|+..+|+.+
T Consensus 146 ~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~SlplG~v~lt~~~ 191 (343)
T 3cer_A 146 APYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNIGSVRMTERH 191 (343)
T ss_dssp SSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEESCCHHHHHHHT
T ss_pred CCEEEEEeCCCceEEEEeecCccCcccccceeEEEehhHHHHHHHh
Confidence 46999999999999998877 4321 124568999999999876
No 32
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=72.60 E-value=5 Score=43.20 Aligned_cols=39 Identities=13% Similarity=0.194 Sum_probs=34.3
Q ss_pred eEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHHH
Q 008184 265 TACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCL 305 (574)
Q Consensus 265 tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~L 305 (574)
.++|||||+++|.++-+.+|.+. ....+++|.--+|+.+
T Consensus 138 ~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrlte~f 176 (513)
T 1u6z_A 138 RKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVSFAQLY 176 (513)
T ss_dssp CEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEeCCeee--EEEEEeccHHHHHHHH
Confidence 69999999999999999888875 4567999999998876
No 33
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=70.21 E-value=7.1 Score=41.96 Aligned_cols=68 Identities=21% Similarity=0.233 Sum_probs=47.6
Q ss_pred HHHHHHHHhcCCCeEEEe---hhhHHHHhh----cCCceEEEEEeCCCceEEEEeeCCeeccCCceeecccHHHHHHH
Q 008184 234 EMLSIVLRDLRFASAVVH---QEGLAAVFG----NGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRC 304 (574)
Q Consensus 234 ~~~eilFE~~~~~~v~~~---~~svla~ya----~G~~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG~~it~~ 304 (574)
++++-+-+..|++ +-++ .|+-++..| .....++|||||.++|.++-+.+|.+. ....+++|.--+|+.
T Consensus 104 ~fl~~i~~~tG~~-ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~e~ 178 (508)
T 3hi0_A 104 DFIREAEAILGCE-IEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCG--EGITLPLGGLRLSEQ 178 (508)
T ss_dssp HHHHHHHHHHTSC-EEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEEC--CCEEESCCHHHHHHH
T ss_pred HHHHHHHHHHCCC-eEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeee--eEEEecceEEehhhc
Confidence 4566666666765 3333 333333333 233468999999999999999999876 456799999988874
No 34
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=55.33 E-value=10 Score=38.74 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=26.6
Q ss_pred ceEEEEEeCCCceEEEEeeC--CeeccCCceeecccHH
Q 008184 264 STACVVNMGAQVTSVICVED--GVALPNTEKTLPFGGE 299 (574)
Q Consensus 264 ~tglVVDiG~~~T~V~pV~d--G~vl~~s~~~l~~GG~ 299 (574)
.+++|||+|.++|.++-... +.+.......+++||.
T Consensus 140 ~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~~ 177 (353)
T 3aap_A 140 KSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQ 177 (353)
T ss_dssp SCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETTE
T ss_pred ccEEEEEeCCCceEEEEecCCccccCCCceEEEEECCc
Confidence 47999999999999998744 3444333567888873
No 35
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=54.09 E-value=2 Score=42.64 Aligned_cols=72 Identities=14% Similarity=0.031 Sum_probs=46.2
Q ss_pred CCHHHHHHHHHHcCCChhHHHHHhcCeEEEcC-CCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeeEeceee
Q 008184 450 IGLAEAVTSSILSTGRIDLQRKLFCSIQLIGG-VALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAV 528 (574)
Q Consensus 450 ~gL~e~I~~sI~~~~~~d~r~~L~~NIvL~GG-~S~ipGf~eRL~~eL~~~~p~~~~i~~V~v~~~~~d~~~~aW~GgSI 528 (574)
.+|..+|.+.|...+-.-.++.=.++|+++|| .+..|++.++|++.+... . . ++.++ .+++|..=+||++
T Consensus 214 asl~~sV~~~I~~la~~~a~~~~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~-~----~-~~~~p---~~~~~~gAlGAaL 284 (287)
T 2ews_A 214 AAVIGVVGEVVTTMAITVAREFKTENIVYIGSSFHNNALLRKVVEDYTVLR-G----C-KPYYV---ENGAFSGAIGALY 284 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEESGGGTTCHHHHHHHHHHHHHT-T----C-EEEEC---TTGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCchhcCHHHHHHHHHHHhhC-C----c-eEEEC---CCccHHHHHHHHH
Confidence 45666666666433101112223357999999 899999999999876542 1 1 34443 4678888888877
Q ss_pred ec
Q 008184 529 LG 530 (574)
Q Consensus 529 la 530 (574)
++
T Consensus 285 ~~ 286 (287)
T 2ews_A 285 LE 286 (287)
T ss_dssp TC
T ss_pred hC
Confidence 65
No 36
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=43.33 E-value=8.5 Score=39.35 Aligned_cols=74 Identities=11% Similarity=0.031 Sum_probs=48.7
Q ss_pred CCHHHHHHHHHHcCCChhHHHHHhcCeEEEcC-CCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeeEeceee
Q 008184 450 IGLAEAVTSSILSTGRIDLQRKLFCSIQLIGG-VALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAV 528 (574)
Q Consensus 450 ~gL~e~I~~sI~~~~~~d~r~~L~~NIvL~GG-~S~ipGf~eRL~~eL~~~~p~~~~i~~V~v~~~~~d~~~~aW~GgSI 528 (574)
.||..+|.+.|...+-.--++.=.++|+++|| .+.-|++.+.|+..|..--.... ++.++ .+++|..=+||.+
T Consensus 283 ~gll~sVa~~I~~lA~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~---~~~~~---~~~~y~GAlGAaL 356 (360)
T 2i7n_A 283 RATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQL---KALFL---EHEGYFGAVGALL 356 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSC---CEEEE---TTTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcCCe---eEEEc---CCccHHHHHHHHH
Confidence 46777777776544111123444468999999 99999999999999864322221 34544 3567888888765
Q ss_pred e
Q 008184 529 L 529 (574)
Q Consensus 529 l 529 (574)
+
T Consensus 357 ~ 357 (360)
T 2i7n_A 357 E 357 (360)
T ss_dssp H
T ss_pred H
Confidence 4
No 37
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=35.46 E-value=3.2 Score=42.41 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=23.7
Q ss_pred eEEEcCCCceeeeecCCCCCCCccceeeeeec
Q 008184 20 LVVINPGSANIRIGLAQHDTPLNIPHCIARRT 51 (574)
Q Consensus 20 ~iVi~~GS~~lkiG~a~d~~P~~iP~~ia~~~ 51 (574)
+|=||.|=+++|+ .. ......+|++|+...
T Consensus 6 iigiD~G~~~~K~-~~-~~~~~~fPS~v~~~~ 35 (355)
T 3js6_A 6 VMALDFGNGFVKG-KI-NDEKFVIPSRIGRKT 35 (355)
T ss_dssp EEEEEECSSEEEE-EE-TTEEEEEESEEEECC
T ss_pred EEEEEcCCCcEEE-ec-CCeEEEeceeeeecc
Confidence 5679999999995 33 447899999999643
No 38
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=34.17 E-value=5.5 Score=39.75 Aligned_cols=47 Identities=21% Similarity=0.273 Sum_probs=29.5
Q ss_pred hcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeeEeceeeec
Q 008184 473 FCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLG 530 (574)
Q Consensus 473 ~~NIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~i~~V~v~~~~~d~~~~aW~GgSIla 530 (574)
...|+|+||+|.+ +.+.|++ .++.. . .++.+. .+|.+++=+|+.+++
T Consensus 273 ~~~vvl~GGga~l--l~~~l~~----~~~~~-~-~~~~~~---~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 273 YTHVMVIGGGAEL--ICDAVKK----HTQIR-D-ERFFKT---NNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCEEEEESTTHHH--HHHHHHH----TSCCC-G-GGEECC---SCGGGHHHHHHHHHH
T ss_pred CCeEEEECChHHH--HHHHHHH----HhCCC-C-CceeeC---CCcHHHHHHHHHHhc
Confidence 3679999999987 5544444 44321 0 023433 477898888877655
No 39
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=33.54 E-value=13 Score=37.41 Aligned_cols=46 Identities=17% Similarity=0.303 Sum_probs=30.2
Q ss_pred HhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeeEeceeeecc
Q 008184 472 LFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLGI 531 (574)
Q Consensus 472 L~~NIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~i~~V~v~~~~~d~~~~aW~GgSIla~ 531 (574)
+...|+|+||+|++ +.+.|++++ +. ++.+. .+|.++.=+|.-.++.
T Consensus 278 ~~~~IvltGGGA~l--~~~~l~~~~----~~-----~v~v~---~~P~~a~a~G~~~~~~ 323 (329)
T 4apw_A 278 QLDSLIFIGGTTQK--LKEQISKTY----PN-----NSIIT---NNSQWTTCEGLYKVAV 323 (329)
T ss_dssp SCSEEEEESTTHHH--HHHHHHHHS----TT-----CEECC---SSGGGHHHHHHHHHHH
T ss_pred HccEEEEECChHHH--HHHHHHHHc----CC-----CCEec---CCChhhHHHHHHHHHh
Confidence 46899999999999 556666554 21 24544 3677877777654443
No 40
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=31.66 E-value=5.6 Score=40.35 Aligned_cols=32 Identities=13% Similarity=0.138 Sum_probs=25.7
Q ss_pred eEEEcCCCceeeeecCCCCCCCccceeeeeecC
Q 008184 20 LVVINPGSANIRIGLAQHDTPLNIPHCIARRTS 52 (574)
Q Consensus 20 ~iVi~~GS~~lkiG~a~d~~P~~iP~~ia~~~~ 52 (574)
.|-||.|+.|+|+-. ++..-..+|++||....
T Consensus 23 ~igiDlG~~~tkv~~-~~g~~~~~PSvva~~~~ 54 (346)
T 2fsj_A 23 VVGLDVGYGDTKVIG-VDGKRIIFPSRWAVTET 54 (346)
T ss_dssp EEEEEECSSEEEEEC-GGGCEEEEESCEEEECC
T ss_pred EEEEecCCcceeEEe-cCCCEEEecceeeeccc
Confidence 589999999999874 44445789999998754
No 41
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=28.70 E-value=92 Score=29.93 Aligned_cols=52 Identities=10% Similarity=0.138 Sum_probs=40.9
Q ss_pred HHHHHHHhcCCCeEEEehhhHHHHhhc-----CCceEEEEEeCCCceEEEEeeCCeeccC
Q 008184 235 MLSIVLRDLRFASAVVHQEGLAAVFGN-----GLSTACVVNMGAQVTSVICVEDGVALPN 289 (574)
Q Consensus 235 ~~eilFE~~~~~~v~~~~~svla~ya~-----G~~tglVVDiG~~~T~V~pV~dG~vl~~ 289 (574)
+.+.| +.|++| +++.+++-++++|. +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 87 l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 143 (292)
T 2gup_A 87 WYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHRG 143 (292)
T ss_dssp HHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEECC
T ss_pred HHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEec
Confidence 55667 889998 88999999998873 5678999999987 44666778987753
No 42
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=26.40 E-value=7.6 Score=37.89 Aligned_cols=47 Identities=23% Similarity=0.246 Sum_probs=36.0
Q ss_pred cCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeeEeceeeeccc
Q 008184 474 CSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLGIL 532 (574)
Q Consensus 474 ~NIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~i~~V~v~~~~~d~~~~aW~GgSIla~L 532 (574)
+.|+++||+++.+++.+++.+.|.. +|.+ +..+.+..=+|++++|..
T Consensus 210 ~~i~~~GG~a~n~~~~~~~~~~lg~---------~v~~---p~~~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 210 KDVVMTGGVAQNYGVRGALEEGLGV---------EIKT---SPLAQYNGALGAALYAYK 256 (270)
T ss_dssp SSEEEESGGGGCHHHHHHHHHHHCS---------CEEC---CGGGGGHHHHHHHHHHHH
T ss_pred CeEEEeCccccCHHHHHHHHHHHCC---------CeEe---CCCcchHhHHHHHHHHHH
Confidence 6799999999999999999998853 2333 234566677899988854
No 43
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=25.31 E-value=56 Score=34.39 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=24.6
Q ss_pred ceEEEEEeCCCceEEEEeeCCee-ccCCceeecccH
Q 008184 264 STACVVNMGAQVTSVICVEDGVA-LPNTEKTLPFGG 298 (574)
Q Consensus 264 ~tglVVDiG~~~T~V~pV~dG~v-l~~s~~~l~~GG 298 (574)
.+..|||+|.++|.|+-+.++.+ -+.....+.++|
T Consensus 190 ~t~gvlDlGGgStqi~~~~~~~~~~~~~~~~l~l~g 225 (456)
T 3cj1_A 190 GTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYG 225 (456)
T ss_dssp CCCEEEEECSSEEEEEEECCSCCSCGGGEEEEEETT
T ss_pred CceEEEEcCCCceEEEeccCCccCCCCceEEEEeCC
Confidence 46899999999999999876653 223344555554
No 44
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=24.05 E-value=30 Score=35.94 Aligned_cols=31 Identities=23% Similarity=0.370 Sum_probs=25.0
Q ss_pred ceEEEEEeCCCceEEEEeeCCeeccCCceeec
Q 008184 264 STACVVNMGAQVTSVICVEDGVALPNTEKTLP 295 (574)
Q Consensus 264 ~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~ 295 (574)
..-+|..+|.+. |+|.|.+|.++.-+.--.+
T Consensus 210 ~~lIv~HLGnGa-Si~Ai~~GksVDTsMG~Tp 240 (415)
T 2e1z_A 210 SGLIVAHLGNGA-SICAVRNGQSVDTSMGMTP 240 (415)
T ss_dssp CEEEEEEESSSE-EEEEEETTEEEEESCCSST
T ss_pred cCEEEEEeCCch-hhhheeCCEEEecCCCCCC
Confidence 478999999988 9999999999976653333
No 45
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=21.54 E-value=1.9e+02 Score=27.99 Aligned_cols=47 Identities=15% Similarity=0.191 Sum_probs=35.0
Q ss_pred HhcCCCeEEEehhhHHHHhh-----c--CCceEEEEEeCCCceEEEEeeCCeeccC
Q 008184 241 RDLRFASAVVHQEGLAAVFG-----N--GLSTACVVNMGAQVTSVICVEDGVALPN 289 (574)
Q Consensus 241 E~~~~~~v~~~~~svla~ya-----~--G~~tglVVDiG~~~T~V~pV~dG~vl~~ 289 (574)
+.|++| +++.+++-++++| . +..+.++|-+|.+ +-..-|.+|.++..
T Consensus 106 ~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~G 159 (326)
T 2qm1_A 106 SALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLHG 159 (326)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEeec
Confidence 446777 7888888888765 2 4568999999988 55667789988753
No 46
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=21.48 E-value=37 Score=35.28 Aligned_cols=57 Identities=12% Similarity=0.112 Sum_probs=37.2
Q ss_pred HHHhcCCCeEEEehhhHHHHhh--cCC----ceEEEEEeCCCceEEEEeeCCeeccCCceeecccH
Q 008184 239 VLRDLRFASAVVHQEGLAAVFG--NGL----STACVVNMGAQVTSVICVEDGVALPNTEKTLPFGG 298 (574)
Q Consensus 239 lFE~~~~~~v~~~~~svla~ya--~G~----~tglVVDiG~~~T~V~pV~dG~vl~~s~~~l~~GG 298 (574)
-..++||.++. ...++--++ .|+ ..-+|..+|.+ .|+|.|.+|.++.-+.--.+..|
T Consensus 190 giRrYGFHGlS--~~yVa~r~a~~lgk~~~~~~lIv~HLGnG-aSi~Ai~~GksvDTsMG~TpleG 252 (415)
T 3sk3_A 190 GVRRYGAHGTS--HFYVTQEAAKMLNKPVEELNIITCHLGNG-GSVSAIRNGKCVDTSMGLTPLEG 252 (415)
T ss_dssp CCSCCCSCHHH--HHHHHHHHHHHTTSCGGGCCEEEEECSSS-CEEEEEETTEEEEECCCCCCSCC
T ss_pred Cceeeccccch--HHHHHHHHHHHhCCChHHCcEEEEEeCCC-ceEEEEECCEEEEeCCCcCCCCC
Confidence 45677777653 233332222 243 36799999976 58999999999987765556544
No 47
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=20.55 E-value=1.4e+02 Score=28.69 Aligned_cols=48 Identities=8% Similarity=-0.001 Sum_probs=34.5
Q ss_pred EEEEEeCCCceEEEEeeCCeeccCCceeec-ccHHHHHHHHHHHHHhcC
Q 008184 266 ACVVNMGAQVTSVICVEDGVALPNTEKTLP-FGGEDISRCLLWTQRHHQ 313 (574)
Q Consensus 266 glVVDiG~~~T~V~pV~dG~vl~~s~~~l~-~GG~~it~~L~~lL~~~~ 313 (574)
-++||+|.+.+.+.-+.+|.++...+...+ ...+.+...|..++...+
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~ 52 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENN 52 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTT
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcC
Confidence 489999999999998888877655443333 456777777777776543
Done!