Query 008185
Match_columns 574
No_of_seqs 273 out of 2092
Neff 8.4
Searched_HMMs 46136
Date Thu Mar 28 20:34:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008185.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008185hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03092 BT1: BT1 family; Int 100.0 5.2E-41 1.1E-45 359.2 39.8 415 128-543 2-427 (433)
2 TIGR00788 fbt folate/biopterin 100.0 2.1E-38 4.5E-43 343.3 39.1 410 118-530 29-447 (468)
3 PRK03545 putative arabinose tr 100.0 4.6E-27 9.9E-32 249.1 34.5 349 113-500 7-359 (390)
4 PRK11010 ampG muropeptide tran 100.0 4.7E-27 1E-31 256.3 35.2 383 120-530 17-404 (491)
5 COG2814 AraJ Arabinose efflux 100.0 2.5E-26 5.5E-31 236.8 32.2 366 114-525 12-382 (394)
6 TIGR00792 gph sugar (Glycoside 100.0 4.9E-26 1.1E-30 244.5 35.5 386 134-540 19-432 (437)
7 PRK11902 ampG muropeptide tran 100.0 5.7E-26 1.2E-30 241.8 35.2 382 120-528 4-389 (402)
8 PRK09556 uhpT sugar phosphate 100.0 3.1E-26 6.7E-31 248.7 29.0 369 113-495 27-411 (467)
9 PRK10489 enterobactin exporter 99.9 8.1E-26 1.8E-30 241.7 29.6 374 132-542 35-413 (417)
10 PRK10077 xylE D-xylose transpo 99.9 2.2E-25 4.8E-30 242.4 33.0 418 116-546 13-475 (479)
11 TIGR01299 synapt_SV2 synaptic 99.9 5.8E-26 1.3E-30 255.0 29.0 183 113-305 165-362 (742)
12 PRK11663 regulatory protein Uh 99.9 9.1E-26 2E-30 242.7 29.4 365 113-499 21-402 (434)
13 PRK10504 putative transporter; 99.9 1.8E-25 3.9E-30 242.8 30.2 404 113-536 9-461 (471)
14 TIGR00900 2A0121 H+ Antiporter 99.9 2.3E-25 5.1E-30 231.9 29.6 353 123-498 7-365 (365)
15 PRK12307 putative sialic acid 99.9 4.4E-25 9.6E-30 236.4 31.5 365 113-499 16-386 (426)
16 TIGR00891 2A0112 putative sial 99.9 6.1E-25 1.3E-29 232.5 32.1 367 113-498 10-392 (405)
17 PRK10642 proline/glycine betai 99.9 4.7E-25 1E-29 240.9 31.6 396 116-534 17-435 (490)
18 PRK10213 nepI ribonucleoside t 99.9 1.8E-24 3.8E-29 229.8 35.0 321 140-499 45-369 (394)
19 PRK15402 multidrug efflux syst 99.9 9.9E-25 2.1E-29 232.4 32.6 358 113-498 11-372 (406)
20 PRK11273 glpT sn-glycerol-3-ph 99.9 1.3E-24 2.9E-29 235.0 33.9 367 113-499 27-413 (452)
21 PRK11551 putative 3-hydroxyphe 99.9 1E-24 2.2E-29 232.0 31.6 356 113-497 13-371 (406)
22 PRK14995 methyl viologen resis 99.9 9.1E-25 2E-29 238.9 31.8 364 113-496 4-413 (495)
23 TIGR00879 SP MFS transporter, 99.9 5E-25 1.1E-29 237.5 29.0 370 120-499 33-448 (481)
24 PRK09669 putative symporter Ya 99.9 8.7E-24 1.9E-28 228.1 37.1 384 134-540 29-440 (444)
25 TIGR00899 2A0120 sugar efflux 99.9 3.6E-24 7.7E-29 224.8 31.6 364 124-529 6-374 (375)
26 TIGR00892 2A0113 monocarboxyla 99.9 1.7E-24 3.7E-29 234.2 29.8 363 113-498 17-397 (455)
27 TIGR00893 2A0114 d-galactonate 99.9 5.1E-25 1.1E-29 231.1 24.9 345 140-498 19-375 (399)
28 PRK03893 putative sialic acid 99.9 1.8E-24 3.9E-29 236.4 30.1 368 113-499 18-431 (496)
29 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.5E-24 3.2E-29 231.7 28.7 365 113-498 6-397 (412)
30 PRK10429 melibiose:sodium symp 99.9 1.3E-23 2.8E-28 228.5 36.5 394 132-539 24-444 (473)
31 TIGR02718 sider_RhtX_FptX side 99.9 1.8E-23 4E-28 221.5 36.1 363 117-499 3-369 (390)
32 COG2271 UhpC Sugar phosphate p 99.9 4.8E-25 1E-29 224.5 22.7 366 113-500 27-413 (448)
33 PRK10091 MFS transport protein 99.9 6.2E-24 1.3E-28 224.6 32.1 338 120-496 8-350 (382)
34 COG2211 MelB Na+/melibiose sym 99.9 1.1E-23 2.4E-28 221.4 33.1 388 132-537 30-445 (467)
35 PRK11646 multidrug resistance 99.9 1.1E-23 2.5E-28 224.1 33.0 330 132-498 28-361 (400)
36 TIGR00710 efflux_Bcr_CflA drug 99.9 2.1E-23 4.6E-28 219.6 34.0 343 120-491 10-356 (385)
37 PRK15403 multidrug efflux syst 99.9 5.8E-23 1.3E-27 219.5 37.3 345 125-496 26-373 (413)
38 PRK10473 multidrug efflux syst 99.9 3.3E-23 7.1E-28 219.6 34.4 330 132-499 21-352 (392)
39 PRK05122 major facilitator sup 99.9 1.5E-23 3.3E-28 222.5 31.9 371 114-532 15-392 (399)
40 PRK10406 alpha-ketoglutarate t 99.9 4.2E-23 9E-28 222.0 35.0 356 113-493 20-396 (432)
41 TIGR00903 2A0129 major facilit 99.9 1.3E-23 2.8E-28 220.9 30.1 322 139-494 15-340 (368)
42 TIGR00901 2A0125 AmpG-related 99.9 1.5E-23 3.3E-28 219.2 29.9 331 136-481 10-356 (356)
43 PRK09874 drug efflux system pr 99.9 1.1E-23 2.3E-28 224.0 29.0 344 121-499 20-376 (408)
44 TIGR00711 efflux_EmrB drug res 99.9 8.3E-24 1.8E-28 230.2 28.8 363 117-496 4-410 (485)
45 PRK09705 cynX putative cyanate 99.9 1.4E-23 3E-28 222.8 29.7 375 113-535 8-388 (393)
46 TIGR00890 2A0111 Oxalate/Forma 99.9 7.7E-24 1.7E-28 221.3 27.1 355 115-499 4-360 (377)
47 PRK11195 lysophospholipid tran 99.9 3E-23 6.4E-28 220.3 31.7 349 120-500 8-359 (393)
48 TIGR00897 2A0118 polyol permea 99.9 8.9E-23 1.9E-27 217.3 34.1 341 133-499 32-379 (402)
49 PF05977 MFS_3: Transmembrane 99.9 7.5E-23 1.6E-27 222.7 34.0 356 120-500 15-373 (524)
50 TIGR00712 glpT glycerol-3-phos 99.9 1.5E-23 3.2E-28 225.8 28.1 370 113-499 25-411 (438)
51 PLN00028 nitrate transmembrane 99.9 1.1E-23 2.4E-28 229.1 27.4 247 139-400 60-317 (476)
52 PRK15011 sugar efflux transpor 99.9 9.5E-23 2E-27 216.4 33.7 363 124-530 24-392 (393)
53 PRK09952 shikimate transporter 99.9 1.2E-22 2.7E-27 218.7 34.8 392 113-531 20-435 (438)
54 TIGR00881 2A0104 phosphoglycer 99.9 3.2E-24 6.8E-29 224.4 21.5 345 140-500 20-376 (379)
55 TIGR00902 2A0127 phenyl propri 99.9 6.6E-23 1.4E-27 216.8 31.6 345 121-498 10-357 (382)
56 PF07690 MFS_1: Major Facilita 99.9 2.5E-24 5.5E-29 223.2 20.1 344 123-487 4-352 (352)
57 PRK11462 putative transporter; 99.9 2.4E-22 5.2E-27 217.6 36.1 384 133-539 28-439 (460)
58 TIGR00887 2A0109 phosphate:H+ 99.9 7.4E-23 1.6E-27 224.3 31.3 414 113-540 14-500 (502)
59 PRK11652 emrD multidrug resist 99.9 1.6E-22 3.4E-27 214.5 32.5 324 140-495 33-359 (394)
60 PRK12382 putative transporter; 99.9 2.7E-22 5.8E-27 212.6 34.0 329 132-499 33-367 (392)
61 PRK11102 bicyclomycin/multidru 99.9 1.7E-22 3.7E-27 212.5 31.8 260 135-414 12-273 (377)
62 TIGR00895 2A0115 benzoate tran 99.9 5E-23 1.1E-27 217.0 25.9 360 113-493 15-397 (398)
63 PRK03699 putative transporter; 99.9 3.1E-22 6.7E-27 212.5 31.4 350 113-499 5-358 (394)
64 TIGR00898 2A0119 cation transp 99.9 6.2E-23 1.3E-27 224.9 24.9 362 140-535 114-501 (505)
65 PRK11043 putative transporter; 99.9 1.4E-21 3.1E-26 207.7 34.5 324 140-495 31-356 (401)
66 PF13347 MFS_2: MFS/sugar tran 99.9 7E-23 1.5E-27 220.0 24.2 376 136-531 23-427 (428)
67 PRK10054 putative transporter; 99.9 3.2E-22 7E-27 212.5 28.7 351 113-499 6-362 (395)
68 PRK09848 glucuronide transport 99.9 3.6E-21 7.9E-26 207.9 35.9 381 135-538 29-437 (448)
69 PRK15075 citrate-proton sympor 99.9 1.3E-21 2.8E-26 210.5 32.1 363 113-499 13-397 (434)
70 PRK09528 lacY galactoside perm 99.9 2.3E-22 5E-27 215.3 25.4 344 133-499 29-381 (420)
71 PRK11128 putative 3-phenylprop 99.9 1.4E-21 2.9E-26 206.7 30.8 331 132-498 22-357 (382)
72 cd06174 MFS The Major Facilita 99.9 6.3E-22 1.4E-26 204.4 27.6 324 120-499 4-330 (352)
73 PRK03633 putative MFS family t 99.9 2.2E-21 4.7E-26 205.1 32.2 342 113-499 5-350 (381)
74 PRK06814 acylglycerophosphoeth 99.9 7.2E-22 1.6E-26 237.0 32.1 331 150-495 52-395 (1140)
75 PRK10133 L-fucose transporter; 99.9 3.3E-21 7.2E-26 207.4 33.1 345 120-498 31-409 (438)
76 TIGR00894 2A0114euk Na(+)-depe 99.9 1E-22 2.2E-27 221.0 19.4 365 144-529 70-450 (465)
77 PRK15034 nitrate/nitrite trans 99.9 3.4E-21 7.4E-26 205.3 30.1 378 84-498 9-430 (462)
78 PRK08633 2-acyl-glycerophospho 99.9 3.3E-21 7.1E-26 231.5 32.1 335 140-495 35-383 (1146)
79 KOG3764 Vesicular amine transp 99.9 6E-23 1.3E-27 206.7 12.6 328 144-500 100-433 (464)
80 TIGR00883 2A0106 metabolite-pr 99.9 3.8E-21 8.3E-26 202.1 24.9 330 147-498 27-377 (394)
81 PF11700 ATG22: Vacuole efflux 99.9 1.5E-19 3.4E-24 194.8 37.1 365 153-537 73-476 (477)
82 TIGR00886 2A0108 nitrite extru 99.9 4.1E-21 8.9E-26 201.0 21.9 331 135-482 22-365 (366)
83 TIGR00882 2A0105 oligosacchari 99.9 1.9E-20 4E-25 198.9 27.0 355 120-499 7-373 (396)
84 TIGR00889 2A0110 nucleoside tr 99.9 5.1E-20 1.1E-24 197.1 29.6 334 132-498 20-373 (418)
85 KOG0569 Permease of the major 99.9 6.9E-20 1.5E-24 194.6 28.4 383 143-542 47-468 (485)
86 KOG0255 Synaptic vesicle trans 99.9 8.8E-20 1.9E-24 200.9 30.2 415 83-536 58-500 (521)
87 KOG1330 Sugar transporter/spin 99.9 2E-22 4.2E-27 207.3 7.0 369 114-500 32-417 (493)
88 KOG0254 Predicted transporter 99.9 5.8E-19 1.3E-23 193.9 31.5 374 151-544 90-499 (513)
89 TIGR00896 CynX cyanate transpo 99.8 1.2E-19 2.6E-24 189.7 23.7 320 140-498 25-350 (355)
90 TIGR01301 GPH_sucrose GPH fami 99.8 5.6E-18 1.2E-22 181.9 34.1 388 135-532 25-475 (477)
91 TIGR00924 yjdL_sub1_fam amino 99.8 2.4E-18 5.2E-23 187.0 31.3 366 120-495 15-442 (475)
92 PF03209 PUCC: PUCC protein; 99.8 1.7E-17 3.7E-22 170.4 34.6 373 140-528 5-397 (403)
93 TIGR00885 fucP L-fucose:H+ sym 99.8 3.3E-18 7.2E-23 182.6 30.8 344 120-498 8-383 (410)
94 PRK10207 dipeptide/tripeptide 99.8 3.4E-18 7.5E-23 186.2 29.9 364 120-493 19-438 (489)
95 PF03825 Nuc_H_symport: Nucleo 99.8 1.4E-17 3E-22 176.3 30.5 353 114-500 5-368 (400)
96 KOG2615 Permease of the major 99.8 8.7E-19 1.9E-23 175.8 18.5 332 147-498 65-416 (451)
97 KOG2533 Permease of the major 99.8 1.5E-18 3.3E-23 186.6 19.9 288 118-415 48-357 (495)
98 KOG2532 Permease of the major 99.8 1.2E-18 2.6E-23 186.9 16.5 364 142-525 65-443 (466)
99 PF01306 LacY_symp: LacY proto 99.8 1.1E-17 2.4E-22 174.6 22.0 344 132-500 25-379 (412)
100 COG2223 NarK Nitrate/nitrite t 99.8 6E-18 1.3E-22 173.1 18.9 355 114-498 13-377 (417)
101 TIGR00805 oat sodium-independe 99.8 3.2E-18 7E-23 191.6 17.2 287 120-412 38-410 (633)
102 PRK09584 tppB putative tripept 99.8 5.1E-16 1.1E-20 169.8 32.6 165 120-291 26-194 (500)
103 COG2270 Permeases of the major 99.8 4.6E-17 1E-21 166.7 22.5 351 152-531 60-431 (438)
104 TIGR00806 rfc RFC reduced fola 99.7 3.7E-16 8.1E-21 164.2 23.4 168 120-299 32-204 (511)
105 KOG2504 Monocarboxylate transp 99.7 1.1E-16 2.4E-21 173.8 19.5 363 113-498 44-452 (509)
106 KOG0252 Inorganic phosphate tr 99.7 8.4E-18 1.8E-22 172.5 9.3 401 123-540 49-509 (538)
107 PF06609 TRI12: Fungal trichot 99.7 1.5E-15 3.2E-20 165.6 25.0 336 139-493 68-464 (599)
108 PF00083 Sugar_tr: Sugar (and 99.7 3.3E-21 7.2E-26 208.0 -20.1 375 151-541 47-449 (451)
109 PRK15462 dipeptide/tripeptide 99.7 1.7E-14 3.8E-19 155.6 31.9 160 122-288 16-179 (493)
110 COG0738 FucP Fucose permease [ 99.7 1.7E-14 3.6E-19 147.1 25.8 345 120-499 18-387 (422)
111 COG2807 CynX Cyanate permease 99.7 6E-14 1.3E-18 141.0 27.5 324 136-498 33-361 (395)
112 KOG0253 Synaptic vesicle trans 99.6 2.3E-13 4.9E-18 136.2 21.7 390 113-534 76-525 (528)
113 TIGR01272 gluP glucose/galacto 99.5 1.1E-12 2.3E-17 134.8 23.5 262 211-499 10-293 (310)
114 PTZ00207 hypothetical protein; 99.5 3.3E-11 7.1E-16 132.5 35.4 179 113-300 26-208 (591)
115 KOG3574 Acetyl-CoA transporter 99.5 1.1E-12 2.3E-17 131.8 20.5 368 114-500 30-435 (510)
116 KOG2325 Predicted transporter/ 99.5 7.6E-13 1.7E-17 140.1 18.1 186 113-305 32-237 (488)
117 KOG4686 Predicted sugar transp 99.5 1.6E-13 3.5E-18 132.7 11.1 383 118-531 47-445 (459)
118 PF13000 Acatn: Acetyl-coenzym 99.5 1.3E-11 2.8E-16 129.0 23.0 371 119-498 4-469 (544)
119 KOG2532 Permease of the major 99.4 1.7E-13 3.7E-18 147.2 9.2 216 71-294 217-443 (466)
120 KOG2816 Predicted transporter 99.4 4.6E-11 9.9E-16 128.1 26.2 359 114-497 21-393 (463)
121 COG3104 PTR2 Dipeptide/tripept 99.3 9E-10 2E-14 115.9 24.5 168 120-294 26-202 (498)
122 PRK09556 uhpT sugar phosphate 99.2 2.5E-10 5.4E-15 124.1 15.4 175 113-295 257-446 (467)
123 PRK10642 proline/glycine betai 99.2 5.6E-10 1.2E-14 122.2 17.6 163 136-305 272-437 (490)
124 KOG2563 Permease of the major 99.2 7.8E-09 1.7E-13 107.2 24.6 362 113-498 43-423 (480)
125 PRK15011 sugar efflux transpor 99.2 8.9E-10 1.9E-14 117.0 18.3 155 136-300 238-393 (393)
126 PF03137 OATP: Organic Anion T 99.1 7.2E-12 1.6E-16 137.4 -1.6 377 113-496 2-514 (539)
127 TIGR00889 2A0110 nucleoside tr 99.1 9.1E-10 2E-14 118.0 14.4 149 150-303 251-408 (418)
128 TIGR00880 2_A_01_02 Multidrug 99.1 5.4E-10 1.2E-14 99.0 10.2 128 164-300 13-141 (141)
129 PRK09528 lacY galactoside perm 99.1 1.4E-09 3.1E-14 116.5 14.2 146 146-300 258-406 (420)
130 TIGR00893 2A0114 d-galactonate 99.1 2.3E-09 5.1E-14 112.1 15.3 170 120-294 220-395 (399)
131 PRK11273 glpT sn-glycerol-3-ph 99.0 4E-09 8.7E-14 114.2 16.3 162 135-301 274-440 (452)
132 TIGR00894 2A0114euk Na(+)-depe 99.0 1.8E-09 3.8E-14 117.3 13.4 218 71-295 220-447 (465)
133 TIGR00899 2A0120 sugar efflux 99.0 7.7E-09 1.7E-13 108.4 17.4 153 137-299 222-375 (375)
134 TIGR00890 2A0111 Oxalate/Forma 99.0 3.1E-09 6.6E-14 110.9 14.1 142 142-290 232-374 (377)
135 TIGR00883 2A0106 metabolite-pr 99.0 4.3E-09 9.4E-14 110.4 13.7 148 134-287 239-390 (394)
136 PRK10489 enterobactin exporter 99.0 8.6E-09 1.9E-13 110.2 16.2 157 137-302 246-404 (417)
137 PF06963 FPN1: Ferroportin1 (F 99.0 3.2E-07 6.9E-12 97.5 27.5 235 246-486 148-408 (432)
138 COG2271 UhpC Sugar phosphate p 99.0 4.1E-09 8.9E-14 108.6 12.7 175 113-294 251-430 (448)
139 PRK09952 shikimate transporter 99.0 1.3E-08 2.9E-13 109.7 17.4 160 137-301 273-436 (438)
140 cd06174 MFS The Major Facilita 99.0 1E-08 2.2E-13 105.6 15.4 154 134-296 195-350 (352)
141 KOG3626 Organic anion transpor 99.0 1.8E-08 4E-13 111.3 17.4 278 116-399 98-457 (735)
142 PRK11663 regulatory protein Uh 99.0 1.6E-08 3.6E-13 108.8 16.6 159 137-299 266-426 (434)
143 PRK03545 putative arabinose tr 98.9 2.4E-08 5.3E-13 105.8 17.3 148 137-294 228-376 (390)
144 PRK09874 drug efflux system pr 98.9 2.3E-08 5E-13 106.2 15.8 134 153-295 261-395 (408)
145 TIGR00712 glpT glycerol-3-phos 98.9 1.7E-08 3.7E-13 108.9 14.5 160 137-301 274-437 (438)
146 PRK10054 putative transporter; 98.9 1.9E-08 4E-13 107.1 14.5 130 358-499 30-160 (395)
147 PRK05122 major facilitator sup 98.9 3.3E-08 7.2E-13 104.9 16.4 150 140-301 242-392 (399)
148 TIGR00881 2A0104 phosphoglycer 98.9 1.6E-08 3.5E-13 105.5 13.7 140 136-280 238-379 (379)
149 PRK03699 putative transporter; 98.9 4.2E-08 9E-13 104.2 16.7 154 135-298 226-380 (394)
150 TIGR00902 2A0127 phenyl propri 98.9 5E-08 1.1E-12 103.2 17.2 151 135-297 226-378 (382)
151 PRK03633 putative MFS family t 98.9 5.8E-08 1.3E-12 102.6 16.5 147 137-296 223-370 (381)
152 TIGR00892 2A0113 monocarboxyla 98.9 2.3E-08 4.9E-13 108.5 13.5 151 136-292 263-415 (455)
153 TIGR00897 2A0118 polyol permea 98.8 7.9E-08 1.7E-12 102.4 16.9 155 137-298 245-401 (402)
154 PRK09705 cynX putative cyanate 98.8 8.8E-08 1.9E-12 101.8 16.6 156 137-303 228-387 (393)
155 PRK03893 putative sialic acid 98.8 5.2E-08 1.1E-12 106.6 15.1 147 136-290 297-445 (496)
156 PF05631 DUF791: Protein of un 98.8 4.2E-06 9.1E-11 85.5 27.6 233 143-398 62-305 (354)
157 TIGR00879 SP MFS transporter, 98.8 3.3E-08 7.1E-13 106.5 13.3 156 140-301 309-474 (481)
158 PRK11551 putative 3-hydroxyphe 98.8 7.5E-08 1.6E-12 102.4 15.8 151 137-297 243-395 (406)
159 TIGR00710 efflux_Bcr_CflA drug 98.8 4.3E-08 9.3E-13 103.0 13.8 127 362-499 31-158 (385)
160 PRK12382 putative transporter; 98.8 9.9E-08 2.1E-12 101.1 16.4 145 139-295 241-386 (392)
161 PF07690 MFS_1: Major Facilita 98.8 4E-08 8.7E-13 101.6 11.9 128 361-499 22-150 (352)
162 TIGR00891 2A0112 putative sial 98.8 1.3E-07 2.9E-12 99.8 15.9 155 362-533 38-193 (405)
163 PRK11010 ampG muropeptide tran 98.8 1.5E-07 3.3E-12 103.1 16.2 155 138-300 246-405 (491)
164 COG2814 AraJ Arabinose efflux 98.8 3.2E-07 6.9E-12 95.6 17.6 170 113-295 210-383 (394)
165 TIGR01299 synapt_SV2 synaptic 98.8 1.9E-07 4.1E-12 106.0 17.1 160 363-533 194-359 (742)
166 PRK10504 putative transporter; 98.8 2.3E-07 4.9E-12 100.9 17.2 136 135-276 282-418 (471)
167 TIGR00886 2A0108 nitrite extru 98.7 1.4E-07 3.1E-12 98.5 14.5 132 356-497 22-153 (366)
168 KOG3762 Predicted transporter 98.7 3.8E-07 8.2E-12 96.5 17.1 163 326-499 362-525 (618)
169 PRK12307 putative sialic acid 98.7 2.5E-07 5.5E-12 99.0 15.1 140 136-283 253-393 (426)
170 PRK11646 multidrug resistance 98.7 1.2E-07 2.6E-12 101.0 12.5 128 360-499 35-163 (400)
171 PRK10213 nepI ribonucleoside t 98.7 3.1E-07 6.7E-12 97.7 15.6 128 362-500 46-174 (394)
172 TIGR00900 2A0121 H+ Antiporter 98.7 1.4E-07 3E-12 98.0 12.5 129 365-499 28-157 (365)
173 TIGR00882 2A0105 oligosacchari 98.7 5.4E-07 1.2E-11 95.7 17.0 149 137-294 238-391 (396)
174 TIGR00895 2A0115 benzoate tran 98.7 1.1E-07 2.4E-12 99.9 11.4 127 362-499 43-170 (398)
175 TIGR02332 HpaX 4-hydroxyphenyl 98.7 4.6E-07 1E-11 96.9 16.0 124 361-495 33-157 (412)
176 PRK11102 bicyclomycin/multidru 98.6 3.3E-07 7.2E-12 96.2 13.6 126 364-499 19-144 (377)
177 PRK10091 MFS transport protein 98.6 4.2E-07 9.2E-12 96.1 14.4 127 362-499 29-156 (382)
178 PRK15075 citrate-proton sympor 98.6 8.5E-07 1.8E-11 95.5 16.6 136 137-278 261-399 (434)
179 PRK10406 alpha-ketoglutarate t 98.6 1.1E-06 2.4E-11 94.6 17.4 156 137-299 266-425 (432)
180 PRK11043 putative transporter; 98.6 3.8E-07 8.2E-12 96.9 13.2 127 362-499 32-159 (401)
181 PRK10473 multidrug efflux syst 98.6 5.2E-07 1.1E-11 95.6 14.0 126 363-499 30-156 (392)
182 PRK11195 lysophospholipid tran 98.6 9.9E-07 2.1E-11 93.8 15.3 147 363-532 30-177 (393)
183 PRK11128 putative 3-phenylprop 98.6 2.3E-06 5E-11 90.5 17.9 141 138-290 229-371 (382)
184 KOG0637 Sucrose transporter an 98.6 5E-07 1.1E-11 94.0 12.2 131 138-269 56-201 (498)
185 PRK10077 xylE D-xylose transpo 98.6 5.9E-07 1.3E-11 97.7 13.6 155 142-302 298-462 (479)
186 TIGR02718 sider_RhtX_FptX side 98.6 1.5E-06 3.2E-11 92.1 15.8 150 137-292 231-385 (390)
187 PF05977 MFS_3: Transmembrane 98.5 2.3E-06 5.1E-11 93.8 17.3 151 135-294 239-390 (524)
188 TIGR00903 2A0129 major facilit 98.5 1.2E-06 2.7E-11 92.2 14.6 151 363-532 18-169 (368)
189 TIGR00792 gph sugar (Glycoside 98.5 9.4E-07 2E-11 94.9 13.7 128 140-276 248-383 (437)
190 TIGR00711 efflux_EmrB drug res 98.5 5.3E-07 1.2E-11 98.1 11.5 128 362-500 28-156 (485)
191 PRK15402 multidrug efflux syst 98.5 3.6E-06 7.7E-11 89.6 17.0 156 138-299 239-397 (406)
192 COG2223 NarK Nitrate/nitrite t 98.5 1.1E-06 2.4E-11 90.9 11.1 152 134-295 238-398 (417)
193 PF01770 Folate_carrier: Reduc 98.5 8.1E-05 1.8E-09 78.2 25.1 168 120-300 10-184 (412)
194 PRK11902 ampG muropeptide tran 98.4 4.4E-06 9.5E-11 89.0 16.2 151 140-298 235-390 (402)
195 TIGR00898 2A0119 cation transp 98.4 2.4E-06 5.3E-11 93.7 14.3 147 145-302 353-499 (505)
196 PRK15403 multidrug efflux syst 98.4 3.3E-06 7.1E-11 90.4 14.8 152 363-533 43-196 (413)
197 PRK11652 emrD multidrug resist 98.4 4E-06 8.6E-11 88.9 15.3 126 363-499 35-161 (394)
198 PRK14995 methyl viologen resis 98.4 1.7E-06 3.7E-11 94.9 12.8 127 363-500 33-161 (495)
199 TIGR00924 yjdL_sub1_fam amino 98.4 2E-06 4.3E-11 93.8 13.1 131 358-499 33-170 (475)
200 PLN00028 nitrate transmembrane 98.4 3.5E-06 7.7E-11 91.9 15.0 125 361-496 61-185 (476)
201 PRK08633 2-acyl-glycerophospho 98.4 3.7E-06 7.9E-11 101.7 16.1 147 135-290 253-402 (1146)
202 TIGR00885 fucP L-fucose:H+ sym 98.4 3.4E-06 7.4E-11 90.2 13.8 127 361-495 28-155 (410)
203 TIGR00880 2_A_01_02 Multidrug 98.4 2.1E-06 4.5E-11 75.7 10.1 110 379-498 6-115 (141)
204 PF11700 ATG22: Vacuole efflux 98.4 1E-05 2.2E-10 87.8 17.3 172 126-301 294-471 (477)
205 PRK15034 nitrate/nitrite trans 98.4 6.5E-06 1.4E-10 88.5 15.4 126 363-494 62-187 (462)
206 TIGR00806 rfc RFC reduced fola 98.4 8.7E-06 1.9E-10 86.6 15.7 156 361-533 51-207 (511)
207 PRK10207 dipeptide/tripeptide 98.4 4.7E-06 1E-10 91.2 13.9 131 359-499 38-172 (489)
208 PRK15462 dipeptide/tripeptide 98.3 5.9E-06 1.3E-10 89.7 14.2 133 357-499 31-167 (493)
209 KOG2504 Monocarboxylate transp 98.3 9.9E-06 2.1E-10 88.6 16.0 159 132-298 316-476 (509)
210 KOG4686 Predicted sugar transp 98.3 8.5E-06 1.8E-10 79.8 13.6 149 140-299 290-444 (459)
211 TIGR01301 GPH_sucrose GPH fami 98.3 3.2E-06 6.9E-11 91.4 11.7 171 363-533 31-223 (477)
212 PRK06814 acylglycerophosphoeth 98.3 8.2E-06 1.8E-10 98.7 16.5 151 136-291 247-415 (1140)
213 PF02487 CLN3: CLN3 protein; 98.3 0.00014 2.9E-09 76.5 23.3 309 159-495 68-396 (402)
214 TIGR00896 CynX cyanate transpo 98.3 6.5E-06 1.4E-10 85.9 13.6 129 137-275 220-350 (355)
215 TIGR00887 2A0109 phosphate:H+ 98.3 1.6E-05 3.5E-10 87.3 17.2 162 367-534 52-230 (502)
216 PRK09584 tppB putative tripept 98.3 1E-05 2.2E-10 88.8 14.8 158 332-499 17-179 (500)
217 TIGR00805 oat sodium-independe 98.3 1.7E-06 3.6E-11 97.5 8.4 170 362-532 59-284 (633)
218 TIGR00769 AAA ADP/ATP carrier 98.3 0.0006 1.3E-08 73.6 27.4 260 141-410 29-342 (472)
219 PRK09848 glucuronide transport 98.3 6.3E-06 1.4E-10 89.1 12.4 133 137-276 251-391 (448)
220 TIGR01272 gluP glucose/galacto 98.3 2.7E-05 5.8E-10 80.0 15.9 137 139-287 165-304 (310)
221 PF03825 Nuc_H_symport: Nucleo 98.2 2.8E-05 6E-10 82.7 16.3 161 132-301 225-399 (400)
222 KOG2615 Permease of the major 98.2 3E-06 6.5E-11 86.4 7.1 116 369-495 66-181 (451)
223 TIGR00901 2A0125 AmpG-related 98.1 3.2E-05 6.9E-10 80.7 14.2 126 364-498 16-147 (356)
224 PF06813 Nodulin-like: Nodulin 98.1 9.4E-05 2E-09 73.0 16.2 156 138-300 25-184 (250)
225 KOG0569 Permease of the major 98.1 6E-06 1.3E-10 88.7 8.3 149 376-537 65-213 (485)
226 KOG3098 Uncharacterized conser 98.1 0.00069 1.5E-08 72.4 23.4 303 166-488 67-406 (461)
227 PRK10133 L-fucose transporter; 98.1 2.8E-05 6.2E-10 83.9 13.0 125 362-494 52-177 (438)
228 KOG3764 Vesicular amine transp 98.1 9.2E-06 2E-10 83.4 8.1 158 132-296 288-452 (464)
229 KOG1330 Sugar transporter/spin 98.1 8.5E-07 1.9E-11 92.6 0.2 125 363-498 60-185 (493)
230 PF13347 MFS_2: MFS/sugar tran 98.0 4.9E-05 1.1E-09 81.7 12.6 147 120-275 230-386 (428)
231 PTZ00207 hypothetical protein; 98.0 0.00014 3E-09 80.6 15.8 125 362-493 53-179 (591)
232 COG2807 CynX Cyanate permease 98.0 0.00013 2.9E-09 74.3 14.1 170 113-295 210-382 (395)
233 PRK09669 putative symporter Ya 98.0 0.00012 2.5E-09 79.2 14.3 120 150-276 264-391 (444)
234 TIGR00926 2A1704 Peptide:H+ sy 97.9 0.00082 1.8E-08 75.8 21.2 151 140-294 13-178 (654)
235 COG0477 ProP Permeases of the 97.9 0.00067 1.5E-08 67.1 17.0 142 142-290 29-177 (338)
236 PRK11462 putative transporter; 97.7 0.00011 2.5E-09 79.7 9.7 135 359-498 33-174 (460)
237 COG0738 FucP Fucose permease [ 97.7 0.00022 4.7E-09 73.8 10.9 141 348-496 25-166 (422)
238 PRK10429 melibiose:sodium symp 97.7 9.7E-05 2.1E-09 80.5 8.9 135 359-498 30-171 (473)
239 COG2270 Permeases of the major 97.7 0.00063 1.4E-08 70.9 14.0 172 118-300 257-431 (438)
240 PF01306 LacY_symp: LacY proto 97.7 0.00069 1.5E-08 71.6 14.5 156 137-301 243-404 (412)
241 KOG2533 Permease of the major 97.6 0.00032 6.8E-09 76.3 11.3 158 363-533 73-232 (495)
242 PF03209 PUCC: PUCC protein; 97.5 0.0016 3.6E-08 67.9 14.3 156 133-293 227-393 (403)
243 KOG0255 Synaptic vesicle trans 97.5 0.00091 2E-08 73.8 12.7 121 364-495 111-231 (521)
244 KOG3762 Predicted transporter 97.5 0.0003 6.5E-09 75.1 8.1 165 120-294 376-543 (618)
245 COG3202 ATP/ADP translocase [E 97.4 0.15 3.3E-06 54.5 27.3 149 113-272 25-209 (509)
246 KOG0254 Predicted transporter 97.4 0.0018 3.9E-08 71.4 13.0 105 372-486 90-194 (513)
247 KOG0252 Inorganic phosphate tr 97.4 0.00044 9.6E-09 72.5 7.5 129 168-304 367-504 (538)
248 PF03219 TLC: TLC ATP/ADP tran 97.3 0.055 1.2E-06 58.9 23.6 42 231-272 164-205 (491)
249 TIGR00788 fbt folate/biopterin 97.3 0.0013 2.7E-08 71.7 11.2 129 142-275 280-415 (468)
250 KOG4332 Predicted sugar transp 97.3 0.017 3.6E-07 56.7 17.2 307 144-480 66-390 (454)
251 COG2211 MelB Na+/melibiose sym 97.3 0.002 4.2E-08 69.0 11.2 136 132-274 254-397 (467)
252 PF00083 Sugar_tr: Sugar (and 97.2 6E-06 1.3E-10 89.1 -9.1 150 371-533 46-196 (451)
253 PF06813 Nodulin-like: Nodulin 96.9 0.0053 1.1E-07 60.7 10.0 121 362-489 28-150 (250)
254 KOG3810 Micronutrient transpor 96.9 0.012 2.6E-07 59.8 12.3 165 172-346 65-245 (433)
255 PF05631 DUF791: Protein of un 96.8 0.036 7.7E-07 57.1 15.2 125 363-499 61-192 (354)
256 KOG2325 Predicted transporter/ 96.7 0.013 2.7E-07 63.1 11.7 132 358-496 58-191 (488)
257 KOG0253 Synaptic vesicle trans 96.6 0.028 6E-07 57.8 12.1 149 364-533 106-255 (528)
258 PF06609 TRI12: Fungal trichot 96.5 0.018 3.8E-07 63.9 11.2 116 364-491 72-187 (599)
259 COG3104 PTR2 Dipeptide/tripept 96.5 0.0089 1.9E-07 63.8 8.2 144 366-529 56-206 (498)
260 KOG1479 Nucleoside transporter 96.4 0.15 3.3E-06 53.5 16.6 30 380-411 292-321 (406)
261 TIGR00939 2a57 Equilibrative N 96.2 0.43 9.4E-06 51.4 19.6 38 456-493 394-431 (437)
262 KOG1237 H+/oligopeptide sympor 96.1 0.29 6.2E-06 54.5 18.0 152 138-293 61-240 (571)
263 KOG2563 Permease of the major 96.1 0.034 7.4E-07 58.7 10.0 129 362-496 71-202 (480)
264 TIGR00769 AAA ADP/ATP carrier 96.0 0.19 4.2E-06 54.4 15.9 124 371-495 43-190 (472)
265 PF03137 OATP: Organic Anion T 96.0 0.0012 2.6E-08 72.9 -1.4 173 363-535 30-256 (539)
266 KOG3880 Predicted small molecu 95.8 0.026 5.7E-07 56.5 7.3 133 153-299 65-201 (409)
267 KOG2816 Predicted transporter 95.6 0.14 3.1E-06 55.3 12.8 138 379-537 70-208 (463)
268 PF12832 MFS_1_like: MFS_1 lik 95.6 0.021 4.5E-07 45.6 4.7 47 137-188 23-70 (77)
269 PF00854 PTR2: POT family; In 95.5 0.051 1.1E-06 57.2 8.8 82 213-294 35-119 (372)
270 KOG2601 Iron transporter [Inor 95.4 1.2 2.6E-05 46.1 17.5 170 118-293 30-221 (503)
271 PRK03612 spermidine synthase; 94.4 1.2 2.6E-05 49.1 15.9 166 121-293 20-192 (521)
272 COG3202 ATP/ADP translocase [E 94.1 0.81 1.7E-05 49.1 12.9 126 369-495 59-209 (509)
273 PF05978 UNC-93: Ion channel r 93.8 0.99 2.2E-05 41.2 11.5 93 169-271 57-149 (156)
274 PF07672 MFS_Mycoplasma: Mycop 93.8 1.3 2.9E-05 43.7 12.9 50 244-295 3-59 (267)
275 KOG3626 Organic anion transpor 93.7 0.073 1.6E-06 59.9 4.7 174 363-536 124-350 (735)
276 PF12832 MFS_1_like: MFS_1 lik 93.7 0.24 5.1E-06 39.5 6.3 46 364-409 28-73 (77)
277 PF02487 CLN3: CLN3 protein; 93.5 0.89 1.9E-05 48.1 12.1 59 212-270 336-394 (402)
278 PF03092 BT1: BT1 family; Int 93.5 0.5 1.1E-05 50.9 10.6 132 359-499 13-153 (433)
279 PF05978 UNC-93: Ion channel r 93.3 0.97 2.1E-05 41.3 10.6 105 376-495 46-150 (156)
280 KOG4830 Predicted sugar transp 92.9 0.01 2.2E-07 57.7 -3.0 72 120-193 22-101 (412)
281 PF06779 DUF1228: Protein of u 92.6 0.26 5.6E-06 40.0 5.1 69 132-205 9-78 (85)
282 TIGR00926 2A1704 Peptide:H+ sy 92.5 1.7 3.6E-05 49.4 13.2 158 360-524 12-177 (654)
283 PF03219 TLC: TLC ATP/ADP tran 92.1 3 6.5E-05 45.6 14.1 126 369-495 56-205 (491)
284 PRK03612 spermidine synthase; 90.4 4.3 9.4E-05 44.8 13.5 49 452-500 127-176 (521)
285 KOG4332 Predicted sugar transp 90.3 4.4 9.5E-05 40.3 11.7 134 355-500 56-197 (454)
286 PF01770 Folate_carrier: Reduc 89.8 13 0.00028 39.6 15.8 71 457-533 116-186 (412)
287 PF06779 DUF1228: Protein of u 87.0 2.4 5.2E-05 34.4 6.3 54 361-414 17-70 (85)
288 COG0477 ProP Permeases of the 85.6 9.3 0.0002 37.0 11.4 117 371-496 39-158 (338)
289 PF07672 MFS_Mycoplasma: Mycop 81.9 14 0.0003 36.7 10.3 106 158-268 149-263 (267)
290 KOG0637 Sucrose transporter an 81.6 0.66 1.4E-05 49.3 1.2 127 364-491 60-200 (498)
291 COG1230 CzcD Co/Zn/Cd efflux s 81.6 37 0.00081 34.4 13.5 54 140-200 50-103 (296)
292 PF13000 Acatn: Acetyl-coenzym 76.8 32 0.00069 37.5 11.9 57 218-274 412-468 (544)
293 PF06963 FPN1: Ferroportin1 (F 76.4 39 0.00084 36.4 12.6 124 140-267 284-412 (432)
294 KOG3574 Acetyl-CoA transporter 73.1 16 0.00034 38.4 8.1 136 144-280 294-438 (510)
295 KOG3098 Uncharacterized conser 72.3 1.1E+02 0.0024 33.2 14.8 99 166-267 296-408 (461)
296 PF00854 PTR2: POT family; In 70.5 24 0.00053 36.8 9.5 71 446-524 44-118 (372)
297 PF01733 Nucleoside_tran: Nucl 67.6 2.1 4.7E-05 43.8 0.7 35 456-490 270-304 (309)
298 TIGR00939 2a57 Equilibrative N 60.1 1.3E+02 0.0027 32.6 12.5 28 374-401 48-75 (437)
299 KOG1479 Nucleoside transporter 51.2 2.5E+02 0.0055 29.9 12.5 25 507-531 182-206 (406)
300 PHA03237 envelope glycoprotein 40.6 4.4E+02 0.0096 28.2 12.3 6 113-118 21-26 (424)
301 PF04226 Transgly_assoc: Trans 36.8 64 0.0014 23.0 3.9 33 261-293 5-41 (48)
302 PF04226 Transgly_assoc: Trans 30.6 1.9E+02 0.0042 20.5 5.5 16 484-499 5-20 (48)
303 PF01528 Herpes_glycop: Herpes 30.0 5.9E+02 0.013 26.9 11.1 8 468-475 272-279 (374)
304 TIGR02230 ATPase_gene1 F0F1-AT 29.5 2.5E+02 0.0055 23.5 6.8 18 258-275 54-71 (100)
305 TIGR01667 YCCS_YHJK integral m 28.2 2.9E+02 0.0063 31.8 9.4 40 164-204 38-77 (701)
306 KOG2881 Predicted membrane pro 27.3 5.3E+02 0.011 25.7 9.4 22 325-346 197-218 (294)
307 COG1288 Predicted membrane pro 27.1 7.1E+02 0.015 26.9 11.0 24 271-294 213-236 (481)
308 KOG3810 Micronutrient transpor 26.7 3.3E+02 0.0072 28.6 8.4 21 111-131 236-256 (433)
309 KOG4830 Predicted sugar transp 26.4 1.4E+02 0.0029 30.0 5.3 117 120-242 206-324 (412)
310 KOG1237 H+/oligopeptide sympor 25.0 5.6E+02 0.012 28.7 10.7 63 210-272 457-519 (571)
311 PF02535 Zip: ZIP Zinc transpo 24.2 7.3E+02 0.016 24.8 13.4 16 225-240 275-290 (317)
312 TIGR01666 YCCS hypothetical me 23.2 3.2E+02 0.0069 31.5 8.5 39 165-204 39-77 (704)
313 TIGR02230 ATPase_gene1 F0F1-AT 23.1 4.3E+02 0.0092 22.2 7.0 23 383-405 55-77 (100)
314 PRK10263 DNA translocase FtsK; 21.4 3.1E+02 0.0067 33.8 8.0 205 328-572 13-219 (1355)
315 PF06679 DUF1180: Protein of u 20.8 63 0.0014 29.7 1.8 10 552-561 135-144 (163)
No 1
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=100.00 E-value=5.2e-41 Score=359.22 Aligned_cols=415 Identities=30% Similarity=0.457 Sum_probs=350.3
Q ss_pred hhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccC
Q 008185 128 GFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPV 206 (574)
Q Consensus 128 ~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~ 206 (574)
|+.. +...++.+++++++|+++.+.+...++..+||.++|++|.+||.+|++|+|||+|++++.++.+++...++..+.
T Consensus 2 G~~~~l~~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~ 81 (433)
T PF03092_consen 2 GFAGGLSRLAIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPA 81 (433)
T ss_pred ChhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccc
Confidence 4444 677788889999999999999999999999999999999999999999999999999999988777776777665
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--cCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHH
Q 008185 207 AAKALPNLMACVLLSNLGASITEVAKDALVAEYGQK--NGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFA 284 (574)
Q Consensus 207 ~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~--~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~a 284 (574)
...+.....++.++..+|.+.+|+..+++++|..++ +.||..++..+....+|.++|..++|.+.+..++|+.|++.+
T Consensus 82 ~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~ 161 (433)
T PF03092_consen 82 SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISA 161 (433)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHH
Confidence 333455566778889999999999999999999854 458899999999999999999999999999999999999998
Q ss_pred HHHHHHHHHhhhcccccccccccch---hcchhhhhhhhHHHHHHHHHHHHcchhhHHHHH-HHHhHhhhccccccc-ce
Q 008185 285 VLLSLQLAISFSAREESLGLAQVSY---QNVASKSIAQSIKKQFSDLIATIGEESISYPLT-WLVASVAMVPVLSGS-MF 359 (574)
Q Consensus 285 i~~~~~~~~~~~lpEt~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l-~~~l~~~~~~~~~~~-~~ 359 (574)
++..+..+..+++.|++....+.+. ++..........+++.+++++.++.|.++.+.+ +.++ +...+....+ .+
T Consensus 162 ~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~a~~f 240 (433)
T PF03092_consen 162 ALPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFF-FNLPPSISSASSF 240 (433)
T ss_pred HHHHHHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHhccCCCCccEE
Confidence 8888777766544442211110000 000001112236778889999999999999988 6655 5555555555 67
Q ss_pred eehccccC---CCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceE
Q 008185 360 CYQTQCLN---INPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVF 436 (574)
Q Consensus 360 ~~~~~~~g---~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~ 436 (574)
|+.++..+ +++...|...+.+.++.++|..++.++.++++.|+++.+++++.++..+..+.++.++|..+|+++.+|
T Consensus 241 y~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f 320 (433)
T PF03092_consen 241 YFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWF 320 (433)
T ss_pred EEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEE
Confidence 77777777 999999999999999999999999999999999999999998888888877777788888889999999
Q ss_pred EeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHH
Q 008185 437 VLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFL 516 (574)
Q Consensus 437 ~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~ 516 (574)
.++...+.+..+++.++|..++++|+||++.||+.||+..++.|+|..++..++..+.+.++++.++|.+++..++++.+
T Consensus 321 ~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~ 400 (433)
T PF03092_consen 321 ALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSV 400 (433)
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHhcCC
Q 008185 517 AALLPLIWIHNVPMSETIIEKGRKRGL 543 (574)
Q Consensus 517 ~~ll~l~~~~~vp~~~~~~~~~~~~~~ 543 (574)
+.++++.+++++|++++.+|+..+++.
T Consensus 401 ~~ll~l~ll~lLp~~~~~~~~~~~~~~ 427 (433)
T PF03092_consen 401 IQLLPLPLLFLLPPQKRITDELDADGK 427 (433)
T ss_pred HHHHHHHHHHHcCCCchhhHHHhhcCC
Confidence 999999999999999888887665553
No 2
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=100.00 E-value=2.1e-38 Score=343.26 Aligned_cols=410 Identities=35% Similarity=0.483 Sum_probs=324.3
Q ss_pred HHHHHHHHHhhhccchhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhhhhhheeeccccccCCCccchhHhHHHHHH-HH
Q 008185 118 VLCGLGYWVQGFRCFPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVAKPLYGILSDALYIGGAHRIPYICIGVFLQ-IL 196 (574)
Q Consensus 118 ~~~~~~~f~~~~~~~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~-~~ 196 (574)
.++...|+.+|+..+...++.+++++++|+++++++...++..+||.++|+||+++|++|++|+|||+|++++.++. ++
T Consensus 29 ~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~ 108 (468)
T TIGR00788 29 AIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAI 108 (468)
T ss_pred HHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHH
Confidence 44666789999987677777889999999999999999999999999999999999999999999999999888776 34
Q ss_pred HHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc--CccchHHHHHHHHHHHHHHHHHHHHHhhccC
Q 008185 197 SWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKN--GIVGLQSYAFMAAASGGILGNLFGGYFLLKT 274 (574)
Q Consensus 197 ~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~--~rg~~~s~~~~~~~~G~~igp~igg~l~~~~ 274 (574)
++..++..++ ......+++++.+++.+..|+..+++++|..+++ .++.+++..+....+|.++|+.++|++.+..
T Consensus 109 ~~~~l~~~~~---~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~ 185 (468)
T TIGR00788 109 LYGLLPGKVS---SAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKT 185 (468)
T ss_pred HHHhcccccc---hHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4443333222 1333344778889999999999999999998732 2344666777777899999999999999989
Q ss_pred ChhHHHHHHHHHHHHHHHHhhhcccccc-cccccchhcc---h--hhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHh
Q 008185 275 PPTTMFLVFAVLLSLQLAISFSAREESL-GLAQVSYQNV---A--SKSIAQSIKKQFSDLIATIGEESISYPLTWLVASV 348 (574)
Q Consensus 275 gwr~~f~i~ai~~~~~~~~~~~lpEt~~-~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~ 348 (574)
+||.+|++.+++.++..+..+++||++. ...+..++.. . .....+..++..++.++.+++|.++.++++.++.|
T Consensus 186 ~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~ 265 (468)
T TIGR00788 186 LTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSY 265 (468)
T ss_pred CcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHH
Confidence 9999999998888777555677888641 1111000000 0 00111223445566777788899998888777644
Q ss_pred hhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcc
Q 008185 349 AMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQ 428 (574)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~ 428 (574)
...+.....++++.++.+|+++.+.|+.....+++.+++..+++++.+|++.|+++.++.++.+++.+....+...++..
T Consensus 266 ~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~ 345 (468)
T TIGR00788 266 ANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLA 345 (468)
T ss_pred hhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccc
Confidence 44455555555566778999999999999999999999999999999999999999988888777665443344455544
Q ss_pred cCcCcceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChh
Q 008185 429 FGVPNEVFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLP 508 (574)
Q Consensus 429 ~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~ 508 (574)
.+.++.++++....+.....++.++|..+++++.+|++.+|+.+|+++++.++|..+++.++|.+.+.+|.+.++|++++
T Consensus 346 ~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~ 425 (468)
T TIGR00788 346 FGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLW 425 (468)
T ss_pred cCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchH
Confidence 55566667777777777777888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC
Q 008185 509 VGIVIQFLAALLPLIWIHNVPM 530 (574)
Q Consensus 509 ~~~li~~~~~ll~l~~~~~vp~ 530 (574)
..++++.+..++++.+++++|+
T Consensus 426 ~~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 426 LLILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999998
No 3
>PRK03545 putative arabinose transporter; Provisional
Probab=99.96 E-value=4.6e-27 Score=249.10 Aligned_cols=349 Identities=14% Similarity=0.029 Sum_probs=234.2
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
+|...+.+.++.+...... +..... +.+++++|+++.+.++..+++.+++.+ .+++|+++||+ +||+.+..+
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~-~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~ 80 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLL-SDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-----ERRKLLIGL 80 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcch-HHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-----ChHHHHHHH
Confidence 5654444555444432222 322223 356778999999999999999988765 77899999985 566677777
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
.++..++...+++.++ ++.++++|++.+++.+...+...+++.|..++++|++++++...+..+|.++||++++.+
T Consensus 81 ~~~~~~~~~~~~~~~~----~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l 156 (390)
T PRK03545 81 FVLFIASHVLSALAWN----FTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVI 156 (390)
T ss_pred HHHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHH
Confidence 7777777776666543 677888999988888777677788899999999999999999999999999999999999
Q ss_pred hccCChhHHHHHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhh
Q 008185 271 LLKTPPTTMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVA 349 (574)
Q Consensus 271 ~~~~gwr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~ 349 (574)
.+..|||++|++.+++.++..+.. +++||++.+. + +. .++.++.+++|.++......++...
T Consensus 157 ~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~----------~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (390)
T PRK03545 157 GQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEH----------S---GS----LKSLPLLFRRPALVSLYLLTVVVVT 219 (390)
T ss_pred HHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC----------c---ch----HHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 988999999999988877665554 3466643210 0 00 1223345677776544333222111
Q ss_pred hcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhccc
Q 008185 350 MVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQF 429 (574)
Q Consensus 350 ~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~ 429 (574)
.........+.+..+.+|+++.+.+.......++.+++..+.+++.||+++|.+.. +..+.....+......
T Consensus 220 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~------- 291 (390)
T PRK03545 220 AHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAA------- 291 (390)
T ss_pred HHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHh-------
Confidence 11111222233456678999999999888888899999999999999998765443 3333322222111110
Q ss_pred CcCcceEEeehhHHHHHHHHhhHHH-HHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcc
Q 008185 430 GVPNEVFVLCFAGLAETLAQFKLLP-FSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGIT 500 (574)
Q Consensus 430 ~~~~~~~~l~~~~l~~~~~~~~~~p-~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~ 500 (574)
++.+. +....+..+++.....+ ....+.+..| +.+|+++|+++...++|..+||.++|.+.+.+|+.
T Consensus 292 --~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~ 359 (390)
T PRK03545 292 --NSEWH-LSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLS 359 (390)
T ss_pred --chHHH-HHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChh
Confidence 11111 11111111222222222 3455667766 57899999999999999999999999999988753
No 4
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.96 E-value=4.7e-27 Score=256.30 Aligned_cols=383 Identities=12% Similarity=0.062 Sum_probs=254.6
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhhhhhheeecccc-ccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVAKPLYGILSDAL-YIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~pl~G~lsD~~-~~~G~rRk~~l~i~~~~~~~~ 197 (574)
+.+.+|.+++.. +....++.++++ .|++..+++.+ ++..+++..+|+||+++||+ +.+.+|||++++++.+..+++
T Consensus 17 ~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~-~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~ 94 (491)
T PRK11010 17 LLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFF-SLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVA 94 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHH-HHHHHHHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHH
Confidence 556667777766 566666666666 69999999986 55566777899999999995 222237777888787777777
Q ss_pred HHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhc-cCCh
Q 008185 198 WGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLL-KTPP 276 (574)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~-~~gw 276 (574)
...+++.... .+++.+.+.+++.+++.+..++..++++.|..++++|+++.++...+..+|.++|+.+++++.+ ..||
T Consensus 95 ~~~~a~~~~~-~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GW 173 (491)
T PRK11010 95 IAAMGFLEPG-TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGW 173 (491)
T ss_pred HHHHHHcCCc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCH
Confidence 6666565322 2356677788888888999999999999999999999999999999999999999999999988 5799
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhc-cccc
Q 008185 277 TTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMV-PVLS 355 (574)
Q Consensus 277 r~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~-~~~~ 355 (574)
|++|++.+++.++..+..+++||++....+ + ++..+. ...++++.++++..+...+..++ +... ....
T Consensus 174 r~~f~i~a~l~ll~~l~~~~~~e~~~~~~~--~-----~~~~~~---~~~~l~~~~~~~~~~~~ll~~~l-~~~~~~~~~ 242 (491)
T PRK11010 174 QGMYWLMAALLIPCIIATLLAPEPTDTIPV--P-----KTLEQA---VVAPLRDFFGRNNAWLILLLIVL-YKLGDAFAM 242 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcccccc--c-----cchhhh---HHHHHHHHHcCcCHHHHHHHHHH-HHHHHHHHH
Confidence 999999988776665555667886432110 0 000011 11233344566665544433332 2111 1111
Q ss_pred ccceeehccccCCCchhHHHHH-HHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcc
Q 008185 356 GSMFCYQTQCLNINPSVIGMSR-VIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNE 434 (574)
Q Consensus 356 ~~~~~~~~~~~g~s~~~~gl~~-i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~ 434 (574)
...+.|..+.+|+++.+.|+.. ..+.++.+++..+.+++.+|+++|+.+..+.++.++..+....+... .++.
T Consensus 243 ~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~------~~~~ 316 (491)
T PRK11010 243 SLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT------DKNL 316 (491)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc------cccH
Confidence 2223345567899999999986 56678899999999999999998887665544433332221111110 0111
Q ss_pred eEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHH
Q 008185 435 VFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQ 514 (574)
Q Consensus 435 ~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~ 514 (574)
+.......+.....++...+..++..+.++++..|+.+|+.++..++|..+++.+.|.+.+..|+. ..+.+.
T Consensus 317 ~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~--------~~f~~~ 388 (491)
T PRK11010 317 YSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWP--------TFYLFS 388 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH--------HHHHHH
Confidence 111111112122223334445677889999999999999999999999998888999999987742 234444
Q ss_pred HHHHHHHHHHHHhcCC
Q 008185 515 FLAALLPLIWIHNVPM 530 (574)
Q Consensus 515 ~~~~ll~l~~~~~vp~ 530 (574)
+++.+.+++...++++
T Consensus 389 ~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 389 VAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4444444444444443
No 5
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=2.5e-26 Score=236.77 Aligned_cols=366 Identities=17% Similarity=0.078 Sum_probs=263.2
Q ss_pred hhHHHHHHHHHHHhhhccchhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHH
Q 008185 114 KQMLVLCGLGYWVQGFRCFPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVF 192 (574)
Q Consensus 114 ~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~ 192 (574)
|..+..+.++.|+.+..-+.-..+.+.+.+|+|+|..++|+..++|.++..+ .|+...++||+ .||+.++....
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-----~Rr~lLl~~l~ 86 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-----ERRRLLLGLLA 86 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-----chHHHHHHHHH
Confidence 3344447777787777663333444467888999999999999999999877 89999999985 67788877777
Q ss_pred HHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhc
Q 008185 193 LQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLL 272 (574)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~ 272 (574)
+++++..+.+++++ +..+++.|++.++..+.......+..+++.|+++|++++++...+..++.++|..+|.++-+
T Consensus 87 lFi~~n~l~alAp~----f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~ 162 (394)
T COG2814 87 LFIVSNLLSALAPS----FAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ 162 (394)
T ss_pred HHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 88888887777764 78889999999998888888888899999999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhc
Q 008185 273 KTPPTTMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMV 351 (574)
Q Consensus 273 ~~gwr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~ 351 (574)
.+|||+.|++.+.++++..+.. ..+| +....... ....++..+.+++|.++...+..++.+...
T Consensus 163 ~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~-------------~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~ 227 (394)
T COG2814 163 LFGWRATFLAIAVLALLALLLLWKLLP--PSEISGSL-------------PGPLRTLLRLLRRPGVLLGLLATFLFMTGH 227 (394)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCCC-------------CcchhHHHHHhcCchHHHHHHHHHHHHcch
Confidence 9999999999999998887765 5688 11111000 011223345678899988777666533322
Q ss_pred ccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCc
Q 008185 352 PVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGV 431 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~ 431 (574)
+..++.+--+.++..|++....++..+..+++.++|..+.+|+.|| +.++.+....++.++..+... +..
T Consensus 228 F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~-~~~-------- 297 (394)
T COG2814 228 FALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALT-FTG-------- 297 (394)
T ss_pred hhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHH-Hhc--------
Confidence 2222222225678899999999999999999999999999999999 777777666555554443211 111
Q ss_pred CcceEEeehhHHHHHHHHhhHHHH-HHHHHhhcC--CChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChh
Q 008185 432 PNEVFVLCFAGLAETLAQFKLLPF-SMLLARLCP--QGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLP 508 (574)
Q Consensus 432 ~~~~~~l~~~~l~~~~~~~~~~p~-~~l~~~~~p--~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~ 508 (574)
..........+ +.++...|. ..+..+..+ ++.++.+.+++.+..|+|.++|..+||.+.+.+|+.
T Consensus 298 -~~~~~~~~~~~---~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~-------- 365 (394)
T COG2814 298 -ASPALALALLF---LWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYA-------- 365 (394)
T ss_pred -chHHHHHHHHH---HHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchH--------
Confidence 11111111111 122223332 333334433 578899999999999999999999999999997753
Q ss_pred HHHHHHHHHHHHHHHHH
Q 008185 509 VGIVIQFLAALLPLIWI 525 (574)
Q Consensus 509 ~~~li~~~~~ll~l~~~ 525 (574)
....+++++.++++.+.
T Consensus 366 ~~~~~~a~l~~~a~~~~ 382 (394)
T COG2814 366 ATGWVGAALLLLALLLA 382 (394)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 23344444444444443
No 6
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=4.9e-26 Score=244.46 Aligned_cols=386 Identities=17% Similarity=0.114 Sum_probs=252.6
Q ss_pred hhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccc--h
Q 008185 134 WLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAK--A 210 (574)
Q Consensus 134 ~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~--~ 210 (574)
...+.+++.+++|+++.++|++.++..+..++ +|+.|+++||+..+.+||||+++.+..+.+++..++...++... .
T Consensus 19 ~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~ 98 (437)
T TIGR00792 19 STYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGK 98 (437)
T ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchH
Confidence 33455678888999999999999999888765 99999999998766558899998888877777766665543211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccCccchHHHHHHHHHHHHHHHHHHHHHhhc-------cCChhHHHHH
Q 008185 211 LPNLMACVLLSNLGASITEVAKDALVAEYGQ-KNGIVGLQSYAFMAAASGGILGNLFGGYFLL-------KTPPTTMFLV 282 (574)
Q Consensus 211 ~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~-~~~rg~~~s~~~~~~~~G~~igp~igg~l~~-------~~gwr~~f~i 282 (574)
+..+++.+++.+++.+...++..++.+|+++ +++|+++.++...+..+|.++++.+++.+.. ..+||++|++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i 178 (437)
T TIGR00792 99 LVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALV 178 (437)
T ss_pred HHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHH
Confidence 2344555666677777777778888999985 5889999888888888888777766665542 4689999999
Q ss_pred HHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceee
Q 008185 283 FAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCY 361 (574)
Q Consensus 283 ~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~ 361 (574)
.+++..+..++. +++||++......+ +.+.+.++. ++.++++|.++...+..++.+..........++|
T Consensus 179 ~~~l~~~~~~~~~~~~~e~~~~~~~~~-------~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (437)
T TIGR00792 179 LALIGVVSLIICFFGTKERYSEIPKNI-------EKKLSLKQI---FKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYY 248 (437)
T ss_pred HHHHHHHHHHHHHcCCEecCCCCCccc-------ccCCCHHHH---HHHHhCCHHHHHHHHHHHHHHHHHHHHcchhhee
Confidence 988887776664 56888652211100 001122222 3345678877665544443222222222334455
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
.+..++ ++...+.......++.+++..+.+++.+|+++|+.+..+.++.++..+.. .+.. .+.+.....
T Consensus 249 ~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~- 317 (437)
T TIGR00792 249 FTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIF-FFAG--------SNLPLILVL- 317 (437)
T ss_pred EeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH-HHcc--------hhHHHHHHH-
Confidence 555566 45566766666788889999999999999999998877766555433321 1110 011111111
Q ss_pred HHHHHHH-HhhHHHHHHHHHhhcC-------CChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCC-------
Q 008185 442 GLAETLA-QFKLLPFSMLLARLCP-------QGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSS------- 506 (574)
Q Consensus 442 ~l~~~~~-~~~~~p~~~l~~~~~p-------~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~------- 506 (574)
.+..+++ +.......++++|.++ ++.+|+++|+.+...++|.++++.+.|.+.+..|+..+.-+.
T Consensus 318 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~~~~~~~~~~~~~~ 397 (437)
T TIGR00792 318 IILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYVANAAQSPITLNGI 397 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCCHHHHHHH
Confidence 1111222 2222333455666654 567899999999999999999999999999998875321111
Q ss_pred hhHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHh
Q 008185 507 LPVGIVIQFLAALLPLIWIH-NVPMSETIIEKGRK 540 (574)
Q Consensus 507 l~~~~li~~~~~ll~l~~~~-~vp~~~~~~~~~~~ 540 (574)
......+.++..+++++.+. ..|.+|++.+|.++
T Consensus 398 ~~~~~~~p~i~~~~~~~~~~~~y~l~~~~~~~i~~ 432 (437)
T TIGR00792 398 KILMFAVPALFLLLAAIIIGRFYKLTEKKHAEIVE 432 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHeeCcHHHHHHHHH
Confidence 12334455555666666665 89988887766443
No 7
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96 E-value=5.7e-26 Score=241.80 Aligned_cols=382 Identities=13% Similarity=0.053 Sum_probs=250.5
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhhhhhheeeccccccCC-CccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVAKPLYGILSDALYIGG-AHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~pl~G~lsD~~~~~G-~rRk~~l~i~~~~~~~~ 197 (574)
+...|+.|++.. +...+++.++++ .|++.+++|++..+ ..++.++|+||+++||++..+ .|||++++++.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~-~~~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLV-GQAYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHH-HHHHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 456789999987 777888888887 59999999998544 446888999999999973221 26677888888887777
Q ss_pred HHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhcc-CCh
Q 008185 198 WGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLK-TPP 276 (574)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~-~gw 276 (574)
..++++..... .++.+++..++.++..+..++..++++.|..++++|+++.++...+..+|.++|+.+++.+.+. .||
T Consensus 82 ~~~l~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw 160 (402)
T PRK11902 82 IAAMAFCPPHA-ALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGW 160 (402)
T ss_pred HHHHHhcCccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCH
Confidence 77766664322 2455555666667778888999999999999999999999999988899999999999998885 599
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccc
Q 008185 277 TTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSG 356 (574)
Q Consensus 277 r~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~ 356 (574)
|..|++.+++.++..+..+++||++.+..+. ++..+.. .+.+++.+++|.++..++..++..........
T Consensus 161 ~~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~-------~~~~~~~---~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~ 230 (402)
T PRK11902 161 GNTYLLMAGLMLAGALTTLWAPEPEVPARPP-------RSLGEAV---VGPLRDFFSRRGAWALLLLIVLYKLGDAFAGS 230 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccccccc-------chhHHHH---HHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHH
Confidence 9999999887766555456678865432110 0001111 22344567788776655443331111111111
Q ss_pred cceeehccccCCCchhHHHHHHH-HHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcce
Q 008185 357 SMFCYQTQCLNINPSVIGMSRVI-GQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEV 435 (574)
Q Consensus 357 ~~~~~~~~~~g~s~~~~gl~~i~-~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~ 435 (574)
..+.+..+.+|+++.+.|+.... +.++.+++..+.+++.||+++|+.+..+.++..+..+....+... ..+.+
T Consensus 231 ~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~------~~~~~ 304 (402)
T PRK11902 231 LSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVT------PKHLW 304 (402)
T ss_pred HHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc------CCcHH
Confidence 12234556789999999998644 455688888999999999998887766555444332221111110 01111
Q ss_pred EEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHH
Q 008185 436 FVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQF 515 (574)
Q Consensus 436 ~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~ 515 (574)
.......+..+.+++...+..+.....++++..++.+++++++..++..+++.++|.+.+.+|+. .++.+.+
T Consensus 305 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~--------~~f~~~~ 376 (402)
T PRK11902 305 TMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEAYGWP--------GFYLMTV 376 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH--------HHHHHHH
Confidence 11111111112233334444555666777777778888888888888887777899999998853 3344444
Q ss_pred HHHHHHHHHHHhc
Q 008185 516 LAALLPLIWIHNV 528 (574)
Q Consensus 516 ~~~ll~l~~~~~v 528 (574)
++.+++++.....
T Consensus 377 ~~~~~~~~~~~~~ 389 (402)
T PRK11902 377 VIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHHHHHH
Confidence 4444444444333
No 8
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.95 E-value=3.1e-26 Score=248.72 Aligned_cols=369 Identities=11% Similarity=-0.027 Sum_probs=236.4
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
.|..+.++++.|+...++- ......+ .+.+++|++..+.|++.+.+.+++.+ +|+.|+++||+ +||+++.++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-----g~r~~l~~~ 100 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQN-DMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-----NTKQFLPFL 100 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-----CccchHHHH
Confidence 4666666777777666544 4555555 56778999999999999999999876 88999999985 455666555
Q ss_pred HHHHHHHHHHhhccc-CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHH
Q 008185 191 VFLQILSWGPLALFP-VAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGY 269 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~ 269 (574)
.++..++....+... ....+++.++++|++.+++.+...+....++.|..++++||.+++++..+..+|+++|++++.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~ 180 (467)
T PRK09556 101 LILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALW 180 (467)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHH
Confidence 555444444333320 0011367788899999988877777777889999999999999999999899999999999887
Q ss_pred hhccC---ChhHHHHHHHHHHHHHHHHh-hhcccccccccccchhc----c--hhhhhhhhHHHHHHH-H-HHHHcchhh
Q 008185 270 FLLKT---PPTTMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQN----V--ASKSIAQSIKKQFSD-L-IATIGEESI 337 (574)
Q Consensus 270 l~~~~---gwr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~----~--~~~~~~~~~~~~~~~-~-~~~~~~~~v 337 (574)
+.+.. +||..|.+.+++.++..++. ++.++++......++++ . +.++..+..+...++ . +..+++|.+
T Consensus 181 ~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 260 (467)
T PRK09556 181 GANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVI 260 (467)
T ss_pred HHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHH
Confidence 76543 69999998888777666554 34555432211000000 0 000000000000011 1 125788888
Q ss_pred HHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhH
Q 008185 338 SYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLL 417 (574)
Q Consensus 338 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~ 417 (574)
+...+..++.+..........|.|+.+.+|+++.+.++......++.+++..+.+++.||+++|+.......+..+....
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~ 340 (467)
T PRK09556 261 WLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTL 340 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHH
Confidence 87766555433333333334566777889999999998888888889999999999999999887665443322221111
Q ss_pred HHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHh-HHHHHHHHHHHHHH
Q 008185 418 DLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCL-SSIASGFLGVGLAS 495 (574)
Q Consensus 418 ~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~l-g~~lg~~i~g~l~~ 495 (574)
+.+... .+.+.......+..........+......|..|++.+|++.|+.+...++ |..++|.+.|.+.+
T Consensus 341 -~~~~~~-------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 341 -GVYQHA-------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred -HHHHhc-------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 111100 01111101111111111111111224566999999999999999999997 77899999999988
No 9
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.95 E-value=8.1e-26 Score=241.70 Aligned_cols=374 Identities=10% Similarity=-0.001 Sum_probs=246.1
Q ss_pred chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhc---ccCc
Q 008185 132 FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLAL---FPVA 207 (574)
Q Consensus 132 ~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~---~~~~ 207 (574)
+....++.+. ++++.++.+.|++.+.+.+++.+ .|+.|+++||+ +||+.+.++.++..+++..++. ...+
T Consensus 35 ~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-----g~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 108 (417)
T PRK10489 35 LLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-----DRKKLILLARGTCGLGFIGLALNAFLPEP 108 (417)
T ss_pred HHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-----CCceEEEehHHHHHHHHHHHHHHHHcCCC
Confidence 3444455444 45788999999999999998866 88999999985 4555565565555554443321 1111
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHH
Q 008185 208 AKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLL 287 (574)
Q Consensus 208 ~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~ 287 (574)
+++.+++.|++.+++.+...+...+.+.|..++++|+++.++......+|.++||.++|.+.+..||+|.|++.++..
T Consensus 109 --~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~ 186 (417)
T PRK10489 109 --SLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGT 186 (417)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 255667788888888777766777888999988999999999888999999999999999988889999999987776
Q ss_pred HHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccC
Q 008185 288 SLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLN 367 (574)
Q Consensus 288 ~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g 367 (574)
++..++.+.+||++.+..+ + ++..++.+ +..+..+++|.++...+..++ ..........++.|..+.+|
T Consensus 187 ~~~~~~~~~l~~~~~~~~~-~------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~g 255 (417)
T PRK10489 187 FITLLPLLRLPALPPPPQP-R------EHPLRSLL---AGFRFLLASPVVGGIALLGGL-LTMASAVRVLYPALADEVWQ 255 (417)
T ss_pred HHHHHHHHhCCCCCCCCcc-c------ccchHHHH---HHHHHHHcChHHHHHHHHHHH-HHHHHhHHHhhHHHHHhccC
Confidence 6655555667775432210 0 00111111 223334566665444332222 11111222234556677799
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHH
Q 008185 368 INPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETL 447 (574)
Q Consensus 368 ~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~ 447 (574)
.++.+.|+......++.+++..+.+++.+|.+.++.+..+.++..+..+. +... ++.+.... ..+..++
T Consensus 256 ~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~-~~~~---------~~~~~~~~-~~~~~g~ 324 (417)
T PRK10489 256 MGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGL-FGLM---------PMWILAVL-CLALFGY 324 (417)
T ss_pred CChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHH-HHcc---------chHHHHHH-HHHHHHH
Confidence 99999999988889999999999999888866666666555444333221 1111 11111111 1111122
Q ss_pred HHhhHHH-HHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHHHHHH
Q 008185 448 AQFKLLP-FSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLPLIWIH 526 (574)
Q Consensus 448 ~~~~~~p-~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l~~~~ 526 (574)
+.....+ ..+++.+..|++.||+++|+++...++|+.+|+.++|.+.+.+|.. ......+++..+++++...
T Consensus 325 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~-------~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 325 LSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPV-------ASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchh-------hHHHHHHHHHHHHHHHHHH
Confidence 2222222 3467789999999999999999999999999999999999987742 1223334444445566667
Q ss_pred hcCCCHHHHHHHHhcC
Q 008185 527 NVPMSETIIEKGRKRG 542 (574)
Q Consensus 527 ~vp~~~~~~~~~~~~~ 542 (574)
.+|+.|+.++||.+.+
T Consensus 398 ~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 398 VLGELRRFRQTPPEVD 413 (417)
T ss_pred hcccccccccccccCC
Confidence 8899888888777655
No 10
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.95 E-value=2.2e-25 Score=242.35 Aligned_cols=418 Identities=13% Similarity=0.069 Sum_probs=247.6
Q ss_pred HHHHHHHHHHHhhhcc-chhhhhHHHHHHhc--------CCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccch
Q 008185 116 MLVLCGLGYWVQGFRC-FPWLALNFHMAHNL--------SLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIP 185 (574)
Q Consensus 116 ~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~--------~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~ 185 (574)
.+++..++.+..+++. +...+.+ .+++++ +.+..+.+++.+.+.++..+ .+++|+++||+ +||+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-----Grr~ 86 (479)
T PRK10077 13 ITLVATLGGLLFGYDTAVISGTVE-SLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRF-----GRRD 86 (479)
T ss_pred HHHHHHHHHHhcCcccceehHhHH-HHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccHH
Confidence 4444666677788776 4444444 345555 88999999999999998876 77899999985 5666
Q ss_pred hHhHHHHHHHHHHHHhhcc--------cCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHH
Q 008185 186 YICIGVFLQILSWGPLALF--------PVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAA 257 (574)
Q Consensus 186 ~l~i~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~ 257 (574)
.++++.++..++..+.++. ..+...+..++++|++++++.+...+...++++|..++++||.++++...+..
T Consensus 87 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~ 166 (479)
T PRK10077 87 SLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAII 166 (479)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHH
Confidence 6666766666665544432 11112245678899999999999888889999999999999999999999989
Q ss_pred HHHHHHHHHHHHhh--------ccCChhHHHHHHHHHHHHHHHHhhhcccccccccccchhcch-----hhhhhhhHHHH
Q 008185 258 SGGILGNLFGGYFL--------LKTPPTTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVA-----SKSIAQSIKKQ 324 (574)
Q Consensus 258 ~G~~igp~igg~l~--------~~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~-----~~~~~~~~~~~ 324 (574)
+|.++++++++.+. +..|||+.|++.++..++..+..+++||++.+..++.+.+.. +....+..++.
T Consensus 167 ~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (479)
T PRK10077 167 FGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQA 246 (479)
T ss_pred HHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHH
Confidence 99999988877653 356999999998877777655567799987543211111000 00000000111
Q ss_pred HHHHHHHHc-----chhhHHH---HHHHHhHhhhcccc--cccceee---hccccCCCchhHHHHHHHHHHHHHHHHHHH
Q 008185 325 FSDLIATIG-----EESISYP---LTWLVASVAMVPVL--SGSMFCY---QTQCLNINPSVIGMSRVIGQSMLLSLTVFY 391 (574)
Q Consensus 325 ~~~~~~~~~-----~~~v~~~---~l~~~l~~~~~~~~--~~~~~~~---~~~~~g~s~~~~gl~~i~~~ig~lig~~l~ 391 (574)
.++.+..++ .+..+.. .....+........ .....++ ..+..|++....++..+..+++.+++..+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 326 (479)
T PRK10077 247 LQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLA 326 (479)
T ss_pred HHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 111111111 1111100 00100000000000 0011111 124578877666666667777788888889
Q ss_pred HHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHH-HHHHHhhcCCChhHH
Q 008185 392 DRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPF-SMLLARLCPQGCEGS 470 (574)
Q Consensus 392 ~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~-~~l~~~~~p~~~~gt 470 (574)
+++.+|+++|+++..+.++.+++.+... .....+ ....+. .....++.+.......|. .++++|.+|++.||+
T Consensus 327 g~l~dr~g~r~~~i~~~~~~~v~~~~l~-~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 400 (479)
T PRK10077 327 IMTVDKFGRKPLQIIGALGMAIGMFSLG-TAFYTQ----APGIVA-LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGK 400 (479)
T ss_pred HHHHHHhcChHHHHHhHHHHHHHHHHHH-HHHhcC----cccHHH-HHHHHHHHHHHhccccchhHHHhHhhCChhHHHH
Confidence 9999999999998888776665543321 111000 000010 111111111111222343 577899999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhcCCCcc
Q 008185 471 LTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLPLIWIHNVPMSETIIEKGRKRGLSRR 546 (574)
Q Consensus 471 ~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l~~~~~vp~~~~~~~~~~~~~~~~~ 546 (574)
+.|+.+..++++..+++.+.+.+.+. ++..+.+...+...+...+..+..++.+++.||++++++||.++.+++.
T Consensus 401 ~~g~~~~~~~~g~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 475 (479)
T PRK10077 401 ALAIAVAAQWIANYFVSWTFPMMDKN-SWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEPE 475 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHhc-cchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhhc
Confidence 99999999999999988776655421 1111111111122222222222233334578999988888777665443
No 11
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.95 E-value=5.8e-26 Score=255.05 Aligned_cols=183 Identities=16% Similarity=0.087 Sum_probs=142.1
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
.|.++++++++.+..++.. +....++ .+.+++|++..+.+++.+++.++.++ .+++|+++||+ +||+.++++
T Consensus 165 ~~~l~~i~~l~~~~~g~d~~~is~ilp-~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-----GRR~~lii~ 238 (742)
T TIGR01299 165 QWALFFVLGLALMADGVEVFVVGFVLP-SAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-----GRKQCLLIC 238 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHHH
Confidence 5666666677777777655 3444444 56667999999999999999998877 67899999985 566666667
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
.++..++.++.++.++ ++.++++|++.++|.+...+...+++.|..|+++||..+++..++..+|.++++.++..+
T Consensus 239 lil~~i~~ll~afa~s----~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~i 314 (742)
T TIGR01299 239 LSVNGFFAFFSSFVQG----YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAI 314 (742)
T ss_pred HHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666665555532 567888999999998888888899999999999999999999999999999999888766
Q ss_pred hcc-------------CChhHHHHHHHHHHHHHHHHhhhccccccccc
Q 008185 271 LLK-------------TPPTTMFLVFAVLLSLQLAISFSAREESLGLA 305 (574)
Q Consensus 271 ~~~-------------~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~ 305 (574)
... .+||+.|++.++..++.++..+++||++.+..
T Consensus 315 l~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~ 362 (742)
T TIGR01299 315 IPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFL 362 (742)
T ss_pred HHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 532 36999999887766655555678999987643
No 12
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.95 E-value=9.1e-26 Score=242.73 Aligned_cols=365 Identities=15% Similarity=0.046 Sum_probs=231.7
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
++.......+.+++..+.. ......+ .+.+++|+++.+.+++.+.+.+++.+ +|+.|+++||+ +||+.+.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-----g~r~~~~~~ 94 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMP-EMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-----NARYFMGIG 94 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-----CCchhHHHH
Confidence 3344444555566555543 3334444 44566999999999999999998866 88999999995 566677777
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
.++..++..+.+...+ ++.+++.|++.+++.+...+...+++.|..++++|+.++++.+.+..+|.++||.+++++
T Consensus 95 ~~~~~~~~~~~~~~~~----~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l 170 (434)
T PRK11663 95 LIATGIINILFGFSSS----LWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI 170 (434)
T ss_pred HHHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777776665532 566677788877777766666678899999989999999999999999999999999999
Q ss_pred hccCChhHHHHHHHHHHHHHHHH-hhhcccccccccccc-----hhcc--hhhhh--hhhHHHHHHHHHHHHcchhhHHH
Q 008185 271 LLKTPPTTMFLVFAVLLSLQLAI-SFSAREESLGLAQVS-----YQNV--ASKSI--AQSIKKQFSDLIATIGEESISYP 340 (574)
Q Consensus 271 ~~~~gwr~~f~i~ai~~~~~~~~-~~~lpEt~~~~~~~~-----~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~v~~~ 340 (574)
.+..|||+.|++.+++.++..++ .+++||++.....+. ++.. .++.. ..+.++..+ ...+++|.++..
T Consensus 171 ~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 248 (434)
T PRK11663 171 ALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILT--KYVLLNPYIWLL 248 (434)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHH--HHHhcChHHHHH
Confidence 99899999999988777655544 356787654321000 0000 00000 001111111 124567777765
Q ss_pred HHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC--CchhHHHHHHHHHHHHHhHH
Q 008185 341 LTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKV--PLRKLVGAVQILYASSLLLD 418 (574)
Q Consensus 341 ~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~--~~r~ll~~~~ll~~~~~l~~ 418 (574)
.+..++.+.........++.|..+.+|+++.+.+.......++.+++..+.+++.||+ +.|+.......+........
T Consensus 249 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~ 328 (434)
T PRK11663 249 SFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGS 328 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHH
Confidence 5443332222222223345566677899999988887777888888888888888887 33333211111111111111
Q ss_pred HHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHH---HHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 008185 419 LILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLP---FSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLAS 495 (574)
Q Consensus 419 l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p---~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~ 495 (574)
+.... ..+...... +...++.....| ......|..|++.+|++.|+.++..++|.+++|.+.|.+.+
T Consensus 329 ~~~~~-------~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~ 398 (434)
T PRK11663 329 LWLMP-------FASYVMQAA---CFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLE 398 (434)
T ss_pred HHHcc-------cccHHHHHH---HHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 11110 011111000 011111111111 12346788899999999999999999999999999999999
Q ss_pred hhCc
Q 008185 496 LTGI 499 (574)
Q Consensus 496 ~~g~ 499 (574)
..|+
T Consensus 399 ~~g~ 402 (434)
T PRK11663 399 IWHW 402 (434)
T ss_pred hccc
Confidence 7764
No 13
>PRK10504 putative transporter; Provisional
Probab=99.95 E-value=1.8e-25 Score=242.81 Aligned_cols=404 Identities=15% Similarity=0.132 Sum_probs=260.7
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
+|..+. +++.+++..+.. ......+.+ .+++|.++.+.+++.+.+.++..+ .|++|+++||+ +||+.++.+
T Consensus 9 ~~~~~~-~~~~~~~~~~~~~~~~~~~p~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~r~~~~~~ 81 (471)
T PRK10504 9 RWQLWI-VAFGFFMQSLDTTIVNTALPSM-AQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-----GVRNIFFTA 81 (471)
T ss_pred HHHHHH-HHHHHHHHHHhHHHHHHHHHHH-HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----chHHHHHHH
Confidence 344443 666677776665 445555544 456999999999999988888655 88899999985 455556556
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
.++..++..+.++.. + .+.+++.|++.+++.+...+...+.+.|..++++|+.++++......+|..+||.++|.+
T Consensus 82 ~~~~~~~~~~~~~~~-~---~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l 157 (471)
T PRK10504 82 IVLFTLGSLFCALSG-T---LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL 157 (471)
T ss_pred HHHHHHHHHHHHHhC-C---HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 666666665555443 2 566788899999988887777788899999999999999999999999999999999999
Q ss_pred hccCChhHHHHHHHHHHHHHHHHhh-hcccccccccccchh----------------cchhh-hhhh-h-----------
Q 008185 271 LLKTPPTTMFLVFAVLLSLQLAISF-SAREESLGLAQVSYQ----------------NVASK-SIAQ-S----------- 320 (574)
Q Consensus 271 ~~~~gwr~~f~i~ai~~~~~~~~~~-~lpEt~~~~~~~~~~----------------~~~~~-~~~~-~----------- 320 (574)
.+..||||.|++.+....+..+... ..|+.+....+.+.. +.++. .... .
T Consensus 158 ~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (471)
T PRK10504 158 VEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVA 237 (471)
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHH
Confidence 9999999999998777666555543 445433211110000 00000 0000 0
Q ss_pred -----HHH-----HHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHH
Q 008185 321 -----IKK-----QFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVF 390 (574)
Q Consensus 321 -----~~~-----~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l 390 (574)
.++ ...+ .+++++|.+...++..++.+..........++|++..+|.++.+.++......++.+++..+
T Consensus 238 ~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 316 (471)
T PRK10504 238 LLLYLLHARNNNRALFS-LKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRI 316 (471)
T ss_pred HHHHHHHHhcCCCCccC-HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0001 23567777766555444422222222334566777778999999999988888888888888
Q ss_pred HHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHH-HhhHHHHHHHHHhhcCCChhH
Q 008185 391 YDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLA-QFKLLPFSMLLARLCPQGCEG 469 (574)
Q Consensus 391 ~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~p~~~l~~~~~p~~~~g 469 (574)
.+++.+|+++|+++..+.++.++..++.... . ............+..+++ .....+...+..+..|++.+|
T Consensus 317 ~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g 388 (471)
T PRK10504 317 VVQVVNRFGYRRVLVATTLGLALVSLLFMLV-A-------LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLAS 388 (471)
T ss_pred HHHHHHHcCchHHHHHHHHHHHHHHHHHHhc-c-------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhcc
Confidence 9999999999999887766555443322111 0 001111011111112122 233344566778889999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccC--CC----CChhHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Q 008185 470 SLTSFSASALCLSSIASGFLGVGLASLTGITFG--DY----SSLPVGIVIQFLAALLPLIWIHNVPMSETIIE 536 (574)
Q Consensus 470 t~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~--~~----~~l~~~~li~~~~~ll~l~~~~~vp~~~~~~~ 536 (574)
+++|+.++.+++|.++|+.++|.+.+..|+... .. ..+...++..+++.+++++.+..+|.++++.+
T Consensus 389 ~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (471)
T PRK10504 389 SGNSLLSMIMQLSMSIGVTIAGLLLGLFGQQHVSVDSGATHTVFMYTYLCMALIIALPALIFARVPNDTHQNV 461 (471)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHhcCCcchhhhh
Confidence 999999999999999999999999998876421 00 01111122224445555555566776654443
No 14
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.95 E-value=2.3e-25 Score=231.92 Aligned_cols=353 Identities=14% Similarity=0.056 Sum_probs=237.3
Q ss_pred HHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHH
Q 008185 123 GYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGP 200 (574)
Q Consensus 123 ~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~ 200 (574)
..+...+.. +....++.+.. +++.++.+.+++.+++.++..+ .|++|+++||+ +||+.+..+.++..++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-----g~r~~~~~~~~~~~~~~~~ 80 (365)
T TIGR00900 7 AQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-----DRKKVMIGADLIRAVLVAV 80 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-----chhHHHHHHHHHHHHHHHH
Confidence 334444433 44455555554 4899999999999999998765 88999999985 4666666666655555544
Q ss_pred hhccc-CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHH
Q 008185 201 LALFP-VAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTM 279 (574)
Q Consensus 201 ~~~~~-~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~ 279 (574)
..... ....+++.+++.|++.+++.+...+...+++.|..++++|++++++.+.+..+|.++||.+++++.+..|||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~ 160 (365)
T TIGR00900 81 LPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWA 160 (365)
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 44433 11012567788899999999988888899999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHhhhc--ccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhccccc-c
Q 008185 280 FLVFAVLLSLQLAISFSA--REESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLS-G 356 (574)
Q Consensus 280 f~i~ai~~~~~~~~~~~l--pEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~-~ 356 (574)
|++.++..++..+..+++ ||++....+. . +++ ..++..+..+..+++|.++...+..++......... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (365)
T TIGR00900 161 IWVDAVGFAISALLIVSVRIPELAASEIQA----L-SNA---VLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVA 232 (365)
T ss_pred HHHHHHHHHHHHHHHHhcccccCCCccccc----c-chh---HHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 999877665554444333 3332211100 0 000 111122233445677777665544433222211122 3
Q ss_pred cceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceE
Q 008185 357 SMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVF 436 (574)
Q Consensus 357 ~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~ 436 (574)
..+++..+.+|+++.+.|+......++.+++..+.+++.||.++++++..+.++.++..+.. .... ++.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~ 303 (365)
T TIGR00900 233 LFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVV-GLTP--------PNFPL 303 (365)
T ss_pred HhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHH-Hhhc--------hhHHH
Confidence 45666666789999999999888899999999999999999998887776654444332221 1110 01111
Q ss_pred EeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Q 008185 437 VLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 437 ~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g 498 (574)
......+..........+...++.|.+|++.||+++|+.++..+++..+++.++|.+.+.+|
T Consensus 304 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 304 FLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 11111122222223333345778899999999999999999999999999999999988654
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.95 E-value=4.4e-25 Score=236.37 Aligned_cols=365 Identities=13% Similarity=0.085 Sum_probs=238.4
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
+|.....+.+.++..++.. ...... +.+++++|+++.+.+++.+++.++..+ .|++|+++||+ +||+.+.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-----g~r~~l~~~ 89 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIFYIM-YLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-----GRKPLMMWS 89 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CChHHHHHH
Confidence 4555555777777777766 444444 466788999999999999999998876 78899999985 577777778
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
.++..++..+.++..+ ++.++++|++.++|.+...+...+++.|..++++|++++++...+..+|+++++.+++.+
T Consensus 90 ~~~~~~~~~~~~~~~~----~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l 165 (426)
T PRK12307 90 IVAYSVGTGLSGLASG----VIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSF 165 (426)
T ss_pred HHHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHH
Confidence 7777777766666542 567888999999998887777788999999999999999999999999999999999999
Q ss_pred hccCChhHHHHHHHHHHHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHh--
Q 008185 271 LLKTPPTTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASV-- 348 (574)
Q Consensus 271 ~~~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~-- 348 (574)
.+..|||+.|++.++..++...+....||++....+..+++ .++. ....+......+..+++|.+........+.+
T Consensus 166 ~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (426)
T PRK12307 166 AEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGK-GKHS-QSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSI 243 (426)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhcc-cccc-ccchhhhhHHHHHHHhhchHHHHHHHHHHHHHH
Confidence 88899999999864433222221223566532211100000 0000 0000111123344566666543322111111
Q ss_pred -hhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhc
Q 008185 349 -AMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINL 427 (574)
Q Consensus 349 -~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~ 427 (574)
.........++.|..+ .|+++.+.+.......++.+++..+.+++.||+++|+++..+.++..+..+.. ....
T Consensus 244 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~-~~~~---- 317 (426)
T PRK12307 244 FGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPL-FRIP---- 317 (426)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH-HHHc----
Confidence 1111112233444444 68898888988888888999999999999999999988776665544332211 1110
Q ss_pred ccCcCcceEEeehhHHHHHHHHhhH-HHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 428 QFGVPNEVFVLCFAGLAETLAQFKL-LPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 428 ~~~~~~~~~~l~~~~l~~~~~~~~~-~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
.+....+....+......... .....++.|..|++.+|+++|+...+.++|+.++|.+.|.+.+.+|+
T Consensus 318 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~ 386 (426)
T PRK12307 318 ----QDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGL 386 (426)
T ss_pred ----cccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccH
Confidence 011110111111111111111 11235678999999999999999999999999999999999988764
No 16
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.94 E-value=6.1e-25 Score=232.53 Aligned_cols=367 Identities=11% Similarity=0.046 Sum_probs=241.6
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
+|.....+.+.++..+++. +.....+ .+++++|++..+.+++.+++.++..+ +|+.|+++||+ +||+.+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-----g~r~~~~~~ 83 (405)
T TIGR00891 10 QWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-----GRRLPMVTS 83 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHH
Confidence 6777777778888888776 4444444 56778999999999999999988766 88999999985 456666667
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
.++..++..+..+.++ ++.+++.|++.+++.+...+...+++.|..++++|+.++++...+..+|.++|+.+++.+
T Consensus 84 ~~~~~~~~~~~~~~~~----~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l 159 (405)
T TIGR00891 84 IVLFSAGTLACGFAPG----YITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLV 159 (405)
T ss_pred HHHHHHHHHHHHHhcc----HHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776777666655532 567788899999998888888889999999999999999999999999999999999998
Q ss_pred hccCC--hhHHHHHHHHHHHHHHHHhhhcccccccccccchhcchhhhhh------hhHHHHHH----HHHHHHc-chh-
Q 008185 271 LLKTP--PTTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIA------QSIKKQFS----DLIATIG-EES- 336 (574)
Q Consensus 271 ~~~~g--wr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~------~~~~~~~~----~~~~~~~-~~~- 336 (574)
.+..+ ||+.|++.++..++..+....+||++....+.++++..++... ...++..+ ..++..+ .+.
T Consensus 160 ~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (405)
T TIGR00891 160 VPVWGDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPT 239 (405)
T ss_pred HHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHH
Confidence 87666 9999998766555544444567886543211110000000000 00000000 1111000 000
Q ss_pred hHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHh
Q 008185 337 ISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLL 416 (574)
Q Consensus 337 v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l 416 (574)
+........+...........++.|..+.+|+++.+.+.......++.+++..+.+++.||+++|+.+..+.++..+..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 319 (405)
T TIGR00891 240 FVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLII 319 (405)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHH
Confidence 11111111111111112223345566677899999999998888899999999999999999999887766554322222
Q ss_pred HHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Q 008185 417 LDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASL 496 (574)
Q Consensus 417 ~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~ 496 (574)
... ... .+.+.......+...+..........+++|.+|++.+|+++|+.+.+.++|..++|.++|.+.+.
T Consensus 320 ~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 390 (405)
T TIGR00891 320 PVF-AIG--------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR 390 (405)
T ss_pred HHH-HhC--------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 100 11111111111112222222223346678999999999999999999999999999999999998
Q ss_pred hC
Q 008185 497 TG 498 (574)
Q Consensus 497 ~g 498 (574)
.|
T Consensus 391 ~g 392 (405)
T TIGR00891 391 LD 392 (405)
T ss_pred cc
Confidence 77
No 17
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.94 E-value=4.7e-25 Score=240.86 Aligned_cols=396 Identities=13% Similarity=0.036 Sum_probs=233.2
Q ss_pred HHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhH-HHHH-----HHHhhhhhhh-hhhheeeccccccCCCccchhH
Q 008185 116 MLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPST-LQLV-----QNSGNLPMVA-KPLYGILSDALYIGGAHRIPYI 187 (574)
Q Consensus 116 ~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~-~~l~-----~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l 187 (574)
.++...++.+..+++. +.....+ .+.++++.+... .+++ .++..+++.+ ++++|+++||+ +||+.+
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-----Grr~~l 90 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFVAY-ALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-----GRQKIL 90 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccHHHH
Confidence 4444667778888876 4444443 667777643321 1221 3555667766 66799999985 677778
Q ss_pred hHHHHHHHHHHHHhhcccCccc----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHH
Q 008185 188 CIGVFLQILSWGPLALFPVAAK----ALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILG 263 (574)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~ig 263 (574)
.++.++..++.++++++++... ....++++|+++++|.+...+...+++.|.+|+++||.+.++...+..+|.++|
T Consensus 91 ~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg 170 (490)
T PRK10642 91 AITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLG 170 (490)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 8888888888888887764210 001367889999999988888888999999999999999998888777888888
Q ss_pred HHHHHHhh--------ccCChhHHHHHHHHHHHHHHHHhhhcccccccccccchhcc-hhhhhhhhHHHHHHHHHHHHc-
Q 008185 264 NLFGGYFL--------LKTPPTTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNV-ASKSIAQSIKKQFSDLIATIG- 333 (574)
Q Consensus 264 p~igg~l~--------~~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~- 333 (574)
+.++..+. ..+|||++|++.+++.++..++...+||++......++.+. +++...+..+ .+++++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 247 (490)
T PRK10642 171 AGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPK---VSFKEIATK 247 (490)
T ss_pred HHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhcccccccccc---CCHHHHHHH
Confidence 76655442 25799999999876555444334578998654321110000 0000000000 01112222
Q ss_pred chhhHHHHH-HHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 008185 334 EESISYPLT-WLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYA 412 (574)
Q Consensus 334 ~~~v~~~~l-~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~ 412 (574)
+++.+.... ..++.....+.....++.|+.+.+|++....++......++.+++.++.+++.||+++|+.+..+.++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~ 327 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALF 327 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 111111111 1111112222233334556667789988877777777888899999999999999999988776654333
Q ss_pred HHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHH
Q 008185 413 SSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVG 492 (574)
Q Consensus 413 ~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~ 492 (574)
+..+..+..... .+.........+..+...........+..|.+|++.||++.|+...+..+++.++|.+.+.
T Consensus 328 ~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~ 400 (490)
T PRK10642 328 VLAIPAFILINS-------NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAW 400 (490)
T ss_pred HHHHHHHHHHhC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222211111110 0111111111111111111222234556789999999999998666677777888998888
Q ss_pred HHHhhCcccCCCCChhHHHHHHHHHHHHHHHHHHhcCCCHHH
Q 008185 493 LASLTGITFGDYSSLPVGIVIQFLAALLPLIWIHNVPMSETI 534 (574)
Q Consensus 493 l~~~~g~~~~~~~~l~~~~li~~~~~ll~l~~~~~vp~~~~~ 534 (574)
+.+..+. + +....+..+..+++++..+++||+++.
T Consensus 401 l~~~~~~----~---~~~~~~~~~~~~i~~~~~~~~pes~~~ 435 (490)
T PRK10642 401 LVESTQN----L---MMPAYYLMVVAVIGLITGVTMKETANR 435 (490)
T ss_pred HHHHhCC----c---hHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 8775431 1 111222223333444455567887654
No 18
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.94 E-value=1.8e-24 Score=229.80 Aligned_cols=321 Identities=11% Similarity=0.005 Sum_probs=220.4
Q ss_pred HHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHH
Q 008185 140 HMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACV 218 (574)
Q Consensus 140 ~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 218 (574)
.+.+++|+++++.++..+.+.+...+ +|++|+++||+ +||+.++.+.++..++..+....+ + ++.++++|
T Consensus 45 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-----grr~~~~~~~~~~~~~~~~~~~~~-~---~~~l~~~r 115 (394)
T PRK10213 45 PMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-----DRRYVVILFAVLLTLSCLLVSFAN-S---FSLLLIGR 115 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----CcHHHHHHHHHHHHHHHHHHHHHC-h---HHHHHHHH
Confidence 45677999999999999998887655 88999999985 566777777777777776665543 2 67788999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHh-hhc
Q 008185 219 LLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAIS-FSA 297 (574)
Q Consensus 219 ~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~-~~l 297 (574)
++.+++.+...+...+++.|..++++|++++++...+.++|.++||.+++++.+..|||+.|++.+++.++..+.. ..+
T Consensus 116 ~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~ 195 (394)
T PRK10213 116 ACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSL 195 (394)
T ss_pred HHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999998888778889999999999999999999999999999999999999999999999999887766554443 346
Q ss_pred ccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccc-eeehccccCCCchhHHHH
Q 008185 298 REESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSM-FCYQTQCLNINPSVIGMS 376 (574)
Q Consensus 298 pEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~g~s~~~~gl~ 376 (574)
||++.+.. + . . +..++.+++|.++...+..++.+.........+ +++ .+.+|+++...|+.
T Consensus 196 p~~~~~~~----------~---~-~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~g~s~~~~g~~ 257 (394)
T PRK10213 196 PSLPGEPS----------H---Q-K---QNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVY-MNLAGFGVDGLTLV 257 (394)
T ss_pred CCCCcccc----------c---c-h---hHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCChhHHHHH
Confidence 77532110 0 0 0 112344677777765443333222111111222 333 35689999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHH-hhHHHH
Q 008185 377 RVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQ-FKLLPF 455 (574)
Q Consensus 377 ~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~~p~ 455 (574)
....+++.+++..+.+++.||.+ ++.+..+.++...+.+...... ++.+..... .+..+++. ......
T Consensus 258 ~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~---------~~~~~~~~~-~~l~G~~~~~~~~~~ 326 (394)
T PRK10213 258 LLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWG---------SDKIVATGV-AIIWGLTFALVPVGW 326 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHh---------hhHHHHHHH-HHHHHHHHHhhhHHH
Confidence 88888999999999999999854 4443333333333222211111 011111111 12222222 223333
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 456 SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 456 ~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
.+++++..| +..+...++.....++|..+|+.++|.+.+..|.
T Consensus 327 ~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~ 369 (394)
T PRK10213 327 STWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGL 369 (394)
T ss_pred HHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 456777777 4567788888888899999999999999997764
No 19
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.94 E-value=9.9e-25 Score=232.42 Aligned_cols=358 Identities=15% Similarity=0.039 Sum_probs=241.3
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
+|.+++.+.+..++..+.. +..+..+ .+.+++|.++.+.++..+.+.++..+ .|+.|+++||+ +||+++.++
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-----g~r~~l~~~ 84 (406)
T PRK15402 11 ALLFPLCLVLFEFATYIANDMIQPGML-AVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-----GRRPVMLAG 84 (406)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHhcchH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CChHHHHHH
Confidence 6666676777777666654 4555555 45677999999999999999998766 78899999985 566677777
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
..+..++....+..++ ++.+++.|++.+++.+.......+.+.|..++++|++.+++......+|..+||.+++++
T Consensus 85 ~~~~~~~~~~~~~~~~----~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l 160 (406)
T PRK15402 85 VAFFILTCLAILLAQS----IEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAAL 160 (406)
T ss_pred HHHHHHHHHHHHHHcc----HHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777666655532 566788899988888776666778889999988888888888777788999999999999
Q ss_pred hccCChhHHHHHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhh
Q 008185 271 LLKTPPTTMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVA 349 (574)
Q Consensus 271 ~~~~gwr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~ 349 (574)
.+..+||+.|++.+++.++..+.. +..||++.+..+. . ..++..++.+..+++|.++...+..++...
T Consensus 161 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (406)
T PRK15402 161 IHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEK-------L----SLKELGRDYKLVLKNRRFVAGALALGLVSL 229 (406)
T ss_pred HHccCccHHHHHHHHHHHHHHHHHHHhCCCCCcccccc-------c----cHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 888899999999888877766554 4578765322110 0 011122334456788887765554433222
Q ss_pred hcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhccc
Q 008185 350 MVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQF 429 (574)
Q Consensus 350 ~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~ 429 (574)
.........+.++.+.+|+++.+.|+......++.+++..+.+++.+|+++|+.+.++.++..+..+.. ......
T Consensus 230 ~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~-~~~~~~---- 304 (406)
T PRK15402 230 PLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLA-ALATVI---- 304 (406)
T ss_pred HHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHc----
Confidence 111222234556667789999999988777778888999999999999999988777655444332221 111100
Q ss_pred CcCcceEEeehhHHHHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Q 008185 430 GVPNEVFVLCFAGLAETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 430 ~~~~~~~~l~~~~l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g 498 (574)
....+..+....+..+++.....|. .... ...+++.+|++.++++..++++..+|+.+++.+.+..+
T Consensus 305 -~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 372 (406)
T PRK15402 305 -SSHAYLWLTAGLSLYAFGIGLANAGLYRLT-LFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGG 372 (406)
T ss_pred -ccccHHHHHHHHHHHHHHHHHHhhhHHHHH-hhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 0011111111112222222222222 2222 33455899999999999999999999999888776544
No 20
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.94 E-value=1.3e-24 Score=234.96 Aligned_cols=367 Identities=12% Similarity=0.028 Sum_probs=225.4
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
+|.++..+++.+....+.. ......+ ++.++ |++..+.++..+.+.+++.+ +|++|+++||+ +||++++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-----g~k~~l~~~ 99 (452)
T PRK11273 27 RWQIFLGIFFGYAAYYLVRKNFALAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-----NPRVFLPAG 99 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-----CCchhHHHH
Confidence 4555544444444433321 2223344 56676 99999999999999998876 88999999985 566677777
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHH-HHHHHHHHH
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGG-ILGNLFGGY 269 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~-~igp~igg~ 269 (574)
.++.+++...+++......++..+++.|++.+++.+...+.....+.|..++++|+.++++++.+..+|. +++|+++..
T Consensus 100 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~ 179 (452)
T PRK11273 100 LILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLG 179 (452)
T ss_pred HHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 7776777666655432111245567778888877776666566778898888999999999888888776 556665544
Q ss_pred hhccCChhHHHHHHHHHHHHHHHHh-hhcccccccccccchhcc-h--------hhhhhhhHHHHHHHHHHHHcchhhHH
Q 008185 270 FLLKTPPTTMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNV-A--------SKSIAQSIKKQFSDLIATIGEESISY 339 (574)
Q Consensus 270 l~~~~gwr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~v~~ 339 (574)
+....|||+.|++.+++.++..++. +++||+++....+++++. + ++....+.++.. ....+++|.++.
T Consensus 180 ~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 257 (452)
T PRK11273 180 MAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIF--MQYVLPNKLLWY 257 (452)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHH--HHHHHcChHHHH
Confidence 4344599999999888777765554 567887643211110000 0 000000111111 122467788777
Q ss_pred HHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC--CchhHHH-HHHHHHHHHHh
Q 008185 340 PLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKV--PLRKLVG-AVQILYASSLL 416 (574)
Q Consensus 340 ~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~--~~r~ll~-~~~ll~~~~~l 416 (574)
..+..++.+...+.....+|.|+++..|++..+.+.......++.+++..+.+++.||+ ++|.... ....+..+. +
T Consensus 258 ~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~-~ 336 (452)
T PRK11273 258 IAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIA-T 336 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHH-H
Confidence 65555443333333444566777778899988888887777788888888888888887 3333221 111111111 1
Q ss_pred HHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHH---HHHHHHHhhcCCChhHHHHHHHHHHHHhHHHH-HHHHHHH
Q 008185 417 LDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLL---PFSMLLARLCPQGCEGSLTSFSASALCLSSIA-SGFLGVG 492 (574)
Q Consensus 417 ~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~l-g~~i~g~ 492 (574)
..+.+... .+.+.... ..+ .++..... ...++..|.+|++.+|+++|+.+...++|+.+ +|.++|.
T Consensus 337 ~~~~~~~~-------~~~~~~~~-~~~--~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~ 406 (452)
T PRK11273 337 IVYWLNPA-------GNPTVDMA-CMI--VIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGY 406 (452)
T ss_pred HHHHHhcc-------cChHHHHH-HHH--HHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHH
Confidence 11111100 01110001 111 11111111 12245678999999999999999999998765 7999999
Q ss_pred HHHhhCc
Q 008185 493 LASLTGI 499 (574)
Q Consensus 493 l~~~~g~ 499 (574)
+.+..|+
T Consensus 407 l~~~~g~ 413 (452)
T PRK11273 407 TVDFFGW 413 (452)
T ss_pred HHHHhcc
Confidence 9998774
No 21
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.94 E-value=1e-24 Score=232.00 Aligned_cols=356 Identities=17% Similarity=0.058 Sum_probs=234.5
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
+|.......+..+..+++. ......+ .+.+++|.++.+.+++.+.+.++..+ .++.|+++||+ +||+.+..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~ 86 (406)
T PRK11551 13 LALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-----GRKRILIVS 86 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCchhHHHH
Confidence 5666666666777777765 4444444 45677999999999999999988766 78899999985 466666666
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
.++..++..+.....+ ++.+++.|++.+++.+...+...+++.|..++++|++++++.+.+..+|..+++.+++.+
T Consensus 87 ~~~~~~~~~~~~~~~~----~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 162 (406)
T PRK11551 87 VALFGLFSLATAQAWD----FPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLA 162 (406)
T ss_pred HHHHHHHHHHHHHhcc----HHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666655555432 566788899999988887777889999999999999999999999999999999999988
Q ss_pred hccCChhHHHHHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhh
Q 008185 271 LLKTPPTTMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVA 349 (574)
Q Consensus 271 ~~~~gwr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~ 349 (574)
.+..+||+.|++.+++.++..++. +++||++.+.....++ ++ .+...+ ..++..+.+..+...+..++...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 234 (406)
T PRK11551 163 AGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAG----KQ-RAPVLR---ALFGEGRATATLLLWISYFFTLI 234 (406)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcc----hh-hhhhHH---HHhhhhhhhHHHHHHHHHHHHHH
Confidence 888999999999887666655543 5688875432211000 00 001111 11000011111111111111111
Q ss_pred hcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhccc
Q 008185 350 MVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQF 429 (574)
Q Consensus 350 ~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~ 429 (574)
..+.....++.+.. .+|+++.+.++......++.+++..+.+++.||+++|+.+..+.+...+..+. +...
T Consensus 235 ~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~~------- 305 (406)
T PRK11551 235 VLYFLLNWLPSLLV-GQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAA-LAAA------- 305 (406)
T ss_pred HHHHHHHHHHHHHH-hCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHhc-------
Confidence 11111122334444 47999999999988888999999999999999999888876654433332221 1111
Q ss_pred CcCcceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Q 008185 430 GVPNEVFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLT 497 (574)
Q Consensus 430 ~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~ 497 (574)
++.+.......+.............++..|.+|++.+|++.|+.++..++|..+||.++|.+.+..
T Consensus 306 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 371 (406)
T PRK11551 306 --PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG 371 (406)
T ss_pred --CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC
Confidence 111111111111111111122223567889999999999999999999999999999999988754
No 22
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.94 E-value=9.1e-25 Score=238.91 Aligned_cols=364 Identities=15% Similarity=0.028 Sum_probs=252.9
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
+|..+..+++.+|...++. +...++|. +.+++|.+..+.+|+.+.+.+++.. .|++|+++||+ +||+.++++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~-i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-----Grk~~l~~~ 77 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPT-LSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-----GFKRLLMLG 77 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHH
Confidence 6777777888899988887 77777764 5677999999999999999998754 88999999984 677777778
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cccCccchHHHHHHHHHHHHHHHHHHHHH
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYG-QKNGIVGLQSYAFMAAASGGILGNLFGGY 269 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~-~~~~rg~~~s~~~~~~~~G~~igp~igg~ 269 (574)
.++..++..+++..++ .+.++++|+++++|.+...+.....+.+.. ++++|++++++......+|.++||.++|+
T Consensus 78 ~~~~~~~~~~~~~a~~----~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~ 153 (495)
T PRK14995 78 GTLFGLASLAAAFSPT----ASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGI 153 (495)
T ss_pred HHHHHHHHHHHHHcCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777777777666543 677889999999988876665556666665 66899999999999999999999999999
Q ss_pred hhccCChhHHHHHHHHHHHHHHHHh-hhcccccccccccchhcchh-------------------hhhhhh---------
Q 008185 270 FLLKTPPTTMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVAS-------------------KSIAQS--------- 320 (574)
Q Consensus 270 l~~~~gwr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~-------------------~~~~~~--------- 320 (574)
+.+..||||+|++...+.++..++. +++||++....++ .+... +.....
T Consensus 154 l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~--~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 231 (495)
T PRK14995 154 LLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQP--LNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLT 231 (495)
T ss_pred hhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC--CChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHH
Confidence 9999999999999877776665554 5677754321110 00000 000000
Q ss_pred --------HHHHHH---H--HHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHH
Q 008185 321 --------IKKQFS---D--LIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSL 387 (574)
Q Consensus 321 --------~~~~~~---~--~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig 387 (574)
...+.+ + ..+++++|.+....+..++...........++.|+++.+|+++.+.|+......++..++
T Consensus 232 ~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~ 311 (495)
T PRK14995 232 GALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFS 311 (495)
T ss_pred HHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 000000 0 024566766655444443322222222223455777889999999999999999999999
Q ss_pred HHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHH-HhhHHHHHHHHHhhcCCC
Q 008185 388 TVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLA-QFKLLPFSMLLARLCPQG 466 (574)
Q Consensus 388 ~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~p~~~l~~~~~p~~ 466 (574)
..+.+++.+|+++|+++..+.++..+.... +.... . ..+.+.. ....+..+++ +....+......+..|++
T Consensus 312 ~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~-l~~~~-~-----~~~~~~~-~~~~~l~G~g~g~~~~~~~~~~~~~~~~~ 383 (495)
T PRK14995 312 GPIAGILVSRLGLRLVATGGMALSALSFYG-LAMTD-F-----STQQWQA-WGLMALLGFSAASALLASTSAIMAAAPPE 383 (495)
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHHHHH-HHHhc-C-----CCchHHH-HHHHHHHHHhHHHHHHHHHHHHHhcCCHH
Confidence 999999999999988877666555433221 11111 0 0111111 1112222233 344445666778889999
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Q 008185 467 CEGSLTSFSASALCLSSIASGFLGVGLASL 496 (574)
Q Consensus 467 ~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~ 496 (574)
++|.+.++++..+++|.++|+.+.|.+.+.
T Consensus 384 ~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 384 KAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888764
No 23
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.94 E-value=5e-25 Score=237.55 Aligned_cols=370 Identities=15% Similarity=0.038 Sum_probs=224.6
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCC--------hhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLH--------PSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICI 189 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s--------~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i 189 (574)
+.+..+..+++. ......+ .+..+++.+ ..+.+++.+++.++..+ .|++|+++||+ +||+.+.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-----grr~~~~~ 106 (481)
T TIGR00879 33 AAIGGLMFGYDTGVIGGALA-LPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-----GRKKSLLI 106 (481)
T ss_pred HHHHHHhcccccchhhhhhh-cHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-----hhHHHHHH
Confidence 333445555554 3333333 334445555 89999999999998766 88999999985 56777777
Q ss_pred HHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHH--
Q 008185 190 GVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFG-- 267 (574)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~ig-- 267 (574)
+.++..++..+....... ..++.+++.|++.++|.+...+...+++.|..++++|+.++++.+.+..+|.++|+.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 185 (481)
T TIGR00879 107 IALLFVIGAILMGLAAFA-LSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSG 185 (481)
T ss_pred HHHHHHHHHHHHHHhccc-cchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 777766666655444322 12346788999999998888888889999999999999999999999999999999999
Q ss_pred -HHhhccCChhHHHHHHHHHHHHHHHHhhhcccccccccccchhcch----------hhhhhhhHH--H-----------
Q 008185 268 -GYFLLKTPPTTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVA----------SKSIAQSIK--K----------- 323 (574)
Q Consensus 268 -g~l~~~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~----------~~~~~~~~~--~----------- 323 (574)
+...+..+||+.|++.++..++..+..+++||++.....+++.+.+ +.......+ +
T Consensus 186 ~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (481)
T TIGR00879 186 KVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKR 265 (481)
T ss_pred hhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 7666778999999997665555544456788875422111000000 000000000 0
Q ss_pred ----HHHHHHHHHcc--hhhH-HHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 008185 324 ----QFSDLIATIGE--ESIS-YPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWK 396 (574)
Q Consensus 324 ----~~~~~~~~~~~--~~v~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~ 396 (574)
..+..+...++ +..+ ...+..+. ..........+..+..+..|++..+.++......++.+++..+.+++.|
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 344 (481)
T TIGR00879 266 SVQPSWGSLFSSTRRIRRRLFLGVVLQWFQ-QFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVD 344 (481)
T ss_pred hccccHHHHHhcCchhHHHHHHHHHHHHHH-HHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111111111 1111 11111111 1111111111111223457888878888888888888888888999999
Q ss_pred cCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCc--CcceEEeehhHHHHHHHHhhHHHH-HHHHHhhcCCChhHHHHH
Q 008185 397 KVPLRKLVGAVQILYASSLLLDLILVRQINLQFGV--PNEVFVLCFAGLAETLAQFKLLPF-SMLLARLCPQGCEGSLTS 473 (574)
Q Consensus 397 r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~--~~~~~~l~~~~l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~g 473 (574)
|+++|+.+..+.++.+++.+......... .... ......+....+..........|. ..++.|..|++.+|+++|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 422 (481)
T TIGR00879 345 RFGRRPLLLIGAAGMAICLFVLGILGASF--VTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGIS 422 (481)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHhhcc--cCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHH
Confidence 99999888777555544433221110000 0000 001111111111111122222232 345689999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 474 FSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 474 l~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
+.+...++|..+++.+.+.+.+..|+
T Consensus 423 ~~~~~~~lg~~i~~~~~~~~~~~~~~ 448 (481)
T TIGR00879 423 IAVAANWLANFIVGFLFPTMLESIGV 448 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999998887654
No 24
>PRK09669 putative symporter YagG; Provisional
Probab=99.94 E-value=8.7e-24 Score=228.06 Aligned_cols=384 Identities=15% Similarity=0.084 Sum_probs=242.5
Q ss_pred hhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCcc--ch
Q 008185 134 WLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAA--KA 210 (574)
Q Consensus 134 ~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~--~~ 210 (574)
...+.+++.+++|+++.++|++.++..+..++ +|+.|.++||.+.+.+||||+++.+.+..++++.++...++.. ..
T Consensus 29 ~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~ 108 (444)
T PRK09669 29 MLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGK 108 (444)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchH
Confidence 44456688899999999999999999886655 9999999999988777899999888777777766555554321 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cCccchHHHHHHHHHHHHHHHHHHHHHhhc-------cCChhHHHHH
Q 008185 211 LPNLMACVLLSNLGASITEVAKDALVAEYGQK-NGIVGLQSYAFMAAASGGILGNLFGGYFLL-------KTPPTTMFLV 282 (574)
Q Consensus 211 ~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~-~~rg~~~s~~~~~~~~G~~igp~igg~l~~-------~~gwr~~f~i 282 (574)
+.++++..++...+.+...++..++.+|++++ ++|+++.++......+|..+++.++..+.. ..||+..+.+
T Consensus 109 ~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i 188 (444)
T PRK09669 109 IIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMV 188 (444)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHH
Confidence 23334444455556667778888999999854 789988887777777777777665443332 3578989988
Q ss_pred HHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceee
Q 008185 283 FAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCY 361 (574)
Q Consensus 283 ~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~ 361 (574)
.+++..+..++. +..||+..+..+ + ..+.+ ++++..++||.++..++..++.............||
T Consensus 189 ~~ii~~v~~~~~~~~~~e~~~~~~~-~---------~~~~~---~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~ 255 (444)
T PRK09669 189 MGLLGVVLFFCCFFMTKERYTPEVD-N---------SSSVW---KDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYY 255 (444)
T ss_pred HHHHHHHHHHHHhCCeEEecCCCCc-C---------CCCHH---HHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhhee
Confidence 888777666654 456775432210 0 01122 334455788877665544333222222222333445
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
.+...+. +...+.......+..+++..+.+++.+|+++|+.+..+.++..+..+... +.. ..+.+..+..
T Consensus 256 ~~~~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~- 325 (444)
T PRK09669 256 VNYVLLR-PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIF-FIP-------PSNVWLIFAL- 325 (444)
T ss_pred eeeecCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH-HhC-------cchHHHHHHH-
Confidence 5544442 33444455566677888888889999999999988776654443332211 110 0111111111
Q ss_pred HHHHHHHHhhHHH-HHHHHHhhcC-------CChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCC-CC---h--
Q 008185 442 GLAETLAQFKLLP-FSMLLARLCP-------QGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDY-SS---L-- 507 (574)
Q Consensus 442 ~l~~~~~~~~~~p-~~~l~~~~~p-------~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~-~~---l-- 507 (574)
.+..+++.....| ..++++|.++ ++.+|..+|+.+...++|.++|+.++|.+.+..|++.+.- +. .
T Consensus 326 ~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~~~~~~q~~~~~~~ 405 (444)
T PRK09669 326 NILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYVGGAAVQSASVLTT 405 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 1222222222222 3456666653 5668999999999999999999999999999999864321 11 1
Q ss_pred --hHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHh
Q 008185 508 --PVGIVIQFLAALLPLIWIHNVPMSETIIEKGRK 540 (574)
Q Consensus 508 --~~~~li~~~~~ll~l~~~~~vp~~~~~~~~~~~ 540 (574)
.....+.+++.+++++.+.++|-+|++.+|.++
T Consensus 406 i~~~~~~~p~~~~~~~~~~~~~y~l~~~~~~~i~~ 440 (444)
T PRK09669 406 INLLFTVIPGVLFAGMAIILNFYKLNDARVEAIAQ 440 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Confidence 122334455556666677789988887776443
No 25
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.94 E-value=3.6e-24 Score=224.77 Aligned_cols=364 Identities=14% Similarity=0.067 Sum_probs=226.4
Q ss_pred HHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhh-hhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHh
Q 008185 124 YWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPM-VAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPL 201 (574)
Q Consensus 124 ~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~-~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~ 201 (574)
++..++.. +..+.++.++++++|.++.+.+++.+.+.+.. ..+|++|.++||+ | |||.++..+.+...++..+.
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~---g-~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ---G-DRKGLILFCCLLAALACLLF 81 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---C-CchHHHHHHHHHHHHHHHHH
Confidence 45555554 55566666788889999999999999988755 5599999999985 3 55555554545444454444
Q ss_pred hcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccch--HHHHHHHHHHHHHHHHHHHHHhhccCChhHH
Q 008185 202 ALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGL--QSYAFMAAASGGILGNLFGGYFLLKTPPTTM 279 (574)
Q Consensus 202 ~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~--~s~~~~~~~~G~~igp~igg~l~~~~gwr~~ 279 (574)
+..++ ++.+++.|++.+.+.+...+...++..|..++++|+.. .+....+.++|.++||.+++++.+..|||+.
T Consensus 82 ~~~~~----~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~ 157 (375)
T TIGR00899 82 AWNRN----YFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVM 157 (375)
T ss_pred Hhcch----HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHH
Confidence 44432 45566777766555555555667777888776666543 4666677789999999999999988999999
Q ss_pred HHHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccc
Q 008185 280 FLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSM 358 (574)
Q Consensus 280 f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~ 358 (574)
|++.++..++..++. +++||++.+..+.+ ... +.+..+++|.++......++.+.........+
T Consensus 158 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (375)
T TIGR00899 158 FLTAALAFVLCGVLVWLFLPSYPRGAPGAL--------TRL-------EVRGLLASRDTRLLFVACTLMWGCNILYIINM 222 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCccccc--------Ccc-------hhhhhhcCcchHHHHHHHHHHHHHHHHHHhhh
Confidence 999988777666654 45888653221100 000 11112445554433322222122111222234
Q ss_pred eeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEe
Q 008185 359 FCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVL 438 (574)
Q Consensus 359 ~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l 438 (574)
+.|..+.+|.++.+.|+......+..+++..+.+++.||+++|+.+..+.++..+..+. ..... +.+...
T Consensus 223 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~ 292 (375)
T TIGR00899 223 PLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTG-LAADN---------SLWALL 292 (375)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHH-HHHHH---------HHHHHH
Confidence 55666778999998888776666666777788889999999998877665443332211 11110 111111
Q ss_pred ehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHH
Q 008185 439 CFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAA 518 (574)
Q Consensus 439 ~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ 518 (574)
....+.....+........+..|..|+ ++++++|+++...++|..++|.++|.+.+..|+. ..+.+.++..
T Consensus 293 ~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~--------~~~~~~~~~~ 363 (375)
T TIGR00899 293 MLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYH--------AVYWFAIVML 363 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccch--------hHHHHHHHHH
Confidence 111111111122222234567788775 5679999999999999999999999999877642 2334444444
Q ss_pred HHHHHHHHhcC
Q 008185 519 LLPLIWIHNVP 529 (574)
Q Consensus 519 ll~l~~~~~vp 529 (574)
+++++...+++
T Consensus 364 ~~~~~~~~~~~ 374 (375)
T TIGR00899 364 IVALFCLLLIK 374 (375)
T ss_pred HHHHHHHheec
Confidence 45555555554
No 26
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.94 E-value=1.7e-24 Score=234.18 Aligned_cols=363 Identities=10% Similarity=-0.056 Sum_probs=217.4
Q ss_pred chhHHHHHHHHHHH-hhhccchhhhhHHHHHHhcCCChhHHHHHHHHhhhhh-hhhhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWV-QGFRCFPWLALNFHMAHNLSLHPSTLQLVQNSGNLPM-VAKPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~-~~~~~~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~-~~~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
+|.++..+.+..+. .+.........+ .+.+++|.+..+.+++.+++.+.. ..+|++|+++||+ +||+.++.+
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-----g~r~~l~~~ 90 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFK-ELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-----GCRPVVIAG 90 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHH-HHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-----CchHHHHhh
Confidence 66566544444322 111112222333 456779999999999999987765 4589999999985 456666667
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHH
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMA-CVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGY 269 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~ 269 (574)
.++..+...++++..+ ++.+++ .|++.+++.+.......+++.|..+ ++|+.+.++.+.+..+|..++|.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~----~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~ 165 (455)
T TIGR00892 91 GLLASLGMILASFSSN----VIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQY 165 (455)
T ss_pred HHHHHHHHHHHHHhhh----HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 6666666665555432 344443 4677777776554455567778775 789999999999999999999999999
Q ss_pred hhccCChhHHHHHHHHHHHHHHHHhhh-cccccccc-cccc-hh----cchhhh-hhhhHHHHHHHH--HHHHcchhhHH
Q 008185 270 FLLKTPPTTMFLVFAVLLSLQLAISFS-AREESLGL-AQVS-YQ----NVASKS-IAQSIKKQFSDL--IATIGEESISY 339 (574)
Q Consensus 270 l~~~~gwr~~f~i~ai~~~~~~~~~~~-lpEt~~~~-~~~~-~~----~~~~~~-~~~~~~~~~~~~--~~~~~~~~v~~ 339 (574)
+.+..|||+.|++.+++.++..+..++ .++...+. .+.+ ++ +...++ ......+..++. .+.+++|.++.
T Consensus 166 l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (455)
T TIGR00892 166 LFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLV 245 (455)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHH
Confidence 999899999999998877665544433 33221100 0000 00 000000 000001111111 24567787765
Q ss_pred HHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC--CchhHHHHHH--HHHHHHH
Q 008185 340 PLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKV--PLRKLVGAVQ--ILYASSL 415 (574)
Q Consensus 340 ~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~--~~r~ll~~~~--ll~~~~~ 415 (574)
.....++...........++.|.. .+|+++.+.++.....+++.+++.++.+++.+|. +.++...+.. ++..+..
T Consensus 246 ~~~~~~l~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ 324 (455)
T TIGR00892 246 YLSGNVIMFLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTH 324 (455)
T ss_pred HHHHHHHHHHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHH
Confidence 554443322222222222233444 4799999999988888888888888888888763 3333322222 2111111
Q ss_pred hHHHHhhhhhhcccCcCcceEEeehhHHHHHHHH-hhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 008185 416 LLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQ-FKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLA 494 (574)
Q Consensus 416 l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~ 494 (574)
+ .+.. ..+.+..+.. .+..+++. ....+...++.+..|++.+|+.+|++++..++|+.+||.++|.+.
T Consensus 325 l---l~~~-------~~~~~~~~i~-~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~ 393 (455)
T TIGR00892 325 L---LCAL-------AGDYTGLVIY-CIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLV 393 (455)
T ss_pred H---HHHH-------hchHHHHHHH-HHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeee
Confidence 1 1110 0111111111 12222222 222334567788999999999999999999999999999999988
Q ss_pred HhhC
Q 008185 495 SLTG 498 (574)
Q Consensus 495 ~~~g 498 (574)
+..|
T Consensus 394 ~~~g 397 (455)
T TIGR00892 394 DATK 397 (455)
T ss_pred hhcC
Confidence 8764
No 27
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.94 E-value=5.1e-25 Score=231.08 Aligned_cols=345 Identities=13% Similarity=-0.024 Sum_probs=228.9
Q ss_pred HHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHH
Q 008185 140 HMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACV 218 (574)
Q Consensus 140 ~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 218 (574)
.+++++|.+..+.+++.+++.++..+ .|++|+++||+ +||+.+.++.++..++..+.++..+ ++.++++|
T Consensus 19 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 89 (399)
T TIGR00893 19 MLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-----GARKTLAVFIVIWGVFTGLQAFAGA----YVSLYILR 89 (399)
T ss_pred HHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-----CcceeeHHHHHHHHHHHHHHHHHcC----HHHHHHHH
Confidence 46778999999999999999998766 88999999985 4555666677766666666665542 56778899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHh-hhc
Q 008185 219 LLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAIS-FSA 297 (574)
Q Consensus 219 ~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~-~~l 297 (574)
++.+++.+...+...+++.|..++++|++++++......+|.++||.+++++.+..+||+.|++.+++.++..++. ++.
T Consensus 90 ~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (399)
T TIGR00893 90 VLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFI 169 (399)
T ss_pred HHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhhee
Confidence 9999998888888889999999999999999999999999999999999999999999999999988877666654 456
Q ss_pred ccccccccccchhcch--hhh------hhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCC
Q 008185 298 REESLGLAQVSYQNVA--SKS------IAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNIN 369 (574)
Q Consensus 298 pEt~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s 369 (574)
||++.......+++.+ .+. ..+..++.....++.+++|.++...+..++...........++.|..+.+|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (399)
T TIGR00893 170 PDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLS 249 (399)
T ss_pred cCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccc
Confidence 6654322111100000 000 00000001122345567777766555444422222223333455667778999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhcCCchh--HHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHH
Q 008185 370 PSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRK--LVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETL 447 (574)
Q Consensus 370 ~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~--ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~ 447 (574)
+.+.++......++.+++..+.+++.||+++|+ +.... .......+.........+ . .+..+..+. .......
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~-~~~~~~~ 324 (399)
T TIGR00893 250 ILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFAR-KTAIIAGLVLSLLMFATN--Y-VNIPYAALA-LVALGFF 324 (399)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH-HHHHHHHHHHHHHHHHhc--c-chhHHHHHH-HHHHHHh
Confidence 989999888888888888888888888888775 21111 111111110000000000 0 011111111 1111111
Q ss_pred HHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Q 008185 448 AQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 448 ~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g 498 (574)
+.....+...+.+|..|++.||+++|+.+.+.++|..++|.+.|.+.+..|
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g 375 (399)
T TIGR00893 325 GLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTG 375 (399)
T ss_pred chhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCC
Confidence 112233346778999999999999999999999999999999999988765
No 28
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.94 E-value=1.8e-24 Score=236.36 Aligned_cols=368 Identities=11% Similarity=0.038 Sum_probs=233.7
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
+|.....+.+.++...++. ......+ .+.+++|+++.+.+++.+.+.++..+ .|+.|+++||+ +||+.+..+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~ 91 (496)
T PRK03893 18 QWKAFSAAWLGYLLDGFDFVLITLVLT-EVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-----GRRLAMVIS 91 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHHH
Confidence 4556665777777777765 4444444 56778999999999999999888766 78899999985 566667677
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
.++..++..+.++..+ ++.+++.|++.+++.+.......+++.|..++++|+.++++...+..+|.+++|.+++++
T Consensus 92 ~~~~~~~~~~~~~~~~----~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 167 (496)
T PRK03893 92 IVLFSVGTLACGFAPG----YWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLV 167 (496)
T ss_pred HHHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777776665532 566788899999888887777788999999999999999999999999999999999999
Q ss_pred hccCChhHHHHHHHHHHHHHHHHhhhcccccccccccchhcchhhhhhhh----HHHHHH---------HHHHHHcc---
Q 008185 271 LLKTPPTTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQS----IKKQFS---------DLIATIGE--- 334 (574)
Q Consensus 271 ~~~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~----~~~~~~---------~~~~~~~~--- 334 (574)
.+..+||+.|++.++..++..+....+||++....+.+++. +.++..+. .++... .....+..
T Consensus 168 ~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (496)
T PRK03893 168 VPVWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKA-PVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQ 246 (496)
T ss_pred hccCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccc-cchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999998864443332222345676543211100000 00000000 000000 00000000
Q ss_pred h------------------------hhHHH--HHHHHhHhhhccc--ccccceeehccccCCCchhHHHHHHHHHHHHHH
Q 008185 335 E------------------------SISYP--LTWLVASVAMVPV--LSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLS 386 (574)
Q Consensus 335 ~------------------------~v~~~--~l~~~l~~~~~~~--~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~li 386 (574)
+ ..+.. ...........+. ....++.|..+.+|+++.+.|+......++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~ 326 (496)
T PRK03893 247 NAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAV 326 (496)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHH
Confidence 0 00000 0000000000010 112235566678999999999999999999999
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCC
Q 008185 387 LTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSMLLARLCPQG 466 (574)
Q Consensus 387 g~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~ 466 (574)
+..+.+++.||+++|+.+..+.++..+..+. +..... ...+.......+....+.........++++.+|++
T Consensus 327 g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (496)
T PRK03893 327 GCCVGGFLGDWLGTRKAYVCSLLISQLLIIP-VFAIGG-------ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTE 398 (496)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHH-Hhhccc-------cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHH
Confidence 9999999999999998877665444332221 111100 01111101111111122111222345678999999
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 467 CEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 467 ~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
.+|+++|++++..++|..+||.++|.+.+.+|+
T Consensus 399 ~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~ 431 (496)
T PRK03893 399 QRAAGLGFTYNVGALGGALAPILGALIAQRLDL 431 (496)
T ss_pred HhhcccchhhhhhhHHHHHHHHHHHHHhccCCh
Confidence 999999999999999999999999999998764
No 29
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.94 E-value=1.5e-24 Score=231.72 Aligned_cols=365 Identities=11% Similarity=0.004 Sum_probs=239.8
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
+|...+.+++.+++++++- ......+ .+++++|++..+.+++.+++.+++.+ +++.|+++||+ +||+.+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----G~r~~~~~~ 79 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-----GARRWIAGI 79 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-----ChHHHHHHH
Confidence 5777777888888888876 4444444 67888999999999999999998876 78899999985 566677777
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
.++..++..+.++.++ +..+++.|++.+++.+...+....++.|..++++|+.++++++.+..+|.++|+.+++++
T Consensus 80 ~~~~~~~~~~~~~~~~----~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l 155 (412)
T TIGR02332 80 MVLWGIASTATMFATG----PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYI 155 (412)
T ss_pred HHHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777776666533 567788999999888877666667789999999999999999999999999999999988
Q ss_pred hc------cCChhHHHHHHHHHHHHHHHHh-hhccccccccc---ccchhcchh----hh-----hh---hhHHHHHHHH
Q 008185 271 LL------KTPPTTMFLVFAVLLSLQLAIS-FSAREESLGLA---QVSYQNVAS----KS-----IA---QSIKKQFSDL 328 (574)
Q Consensus 271 ~~------~~gwr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~---~~~~~~~~~----~~-----~~---~~~~~~~~~~ 328 (574)
.+ ..|||++|++.++..++..++. +++||++.... +.+++...+ .. .. ...+...+..
T Consensus 156 ~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (412)
T TIGR02332 156 LALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSM 235 (412)
T ss_pred HhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHH
Confidence 64 3699999999888877665554 57888874321 100000000 00 00 0000001111
Q ss_pred HHHHcchhhHHHHHHHHhHhhhcccccccceeehcc-ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHH-H
Q 008185 329 IATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQ-CLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVG-A 406 (574)
Q Consensus 329 ~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~-~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~-~ 406 (574)
++.+.+|.++...+..++.......+...+|.++.+ ..|+++.+.+.......++.+++..+.+++.||+++|+... .
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~ 315 (412)
T TIGR02332 236 LREIFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTAL 315 (412)
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHH
Confidence 222335665554443333222222333445556655 35778888888888888999999999999999998776533 2
Q ss_pred HHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHH
Q 008185 407 VQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIA 485 (574)
Q Consensus 407 ~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~l 485 (574)
..++..+ .+. +... ..+....+. ..+....+.....+. .+...+..|++.+|+++|+.+...++|.++
T Consensus 316 ~~~~~~~-~~~---~~~~------~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~ 384 (412)
T TIGR02332 316 PYLFAAA-GWL---LASA------TDHNLIQLL-GIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSAL 384 (412)
T ss_pred HHHHHHH-HHH---HHHh------cCCHHHHHH-HHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhh
Confidence 2222222 111 1110 011111000 011111111111222 233456789999999999999999999999
Q ss_pred HHHHHHHHHHhhC
Q 008185 486 SGFLGVGLASLTG 498 (574)
Q Consensus 486 g~~i~g~l~~~~g 498 (574)
+|.+.|.+.+..|
T Consensus 385 ~p~~~g~i~~~~g 397 (412)
T TIGR02332 385 SPFLIGILKDATG 397 (412)
T ss_pred hhhhcccccccCC
Confidence 9999998888654
No 30
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.94 E-value=1.3e-23 Score=228.48 Aligned_cols=394 Identities=14% Similarity=0.089 Sum_probs=243.8
Q ss_pred chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccc-
Q 008185 132 FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAK- 209 (574)
Q Consensus 132 ~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~- 209 (574)
+....+..|+++.+|+++.++|.+..+..+-.++ +|++|.++||.+++.+|||||++.+.+..++++.++...++...
T Consensus 24 ~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~ 103 (473)
T PRK10429 24 IVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGT 103 (473)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCcc
Confidence 3344455688898999999999999988776554 99999999998777668899999998888887766654432211
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccCccchHHHHHHHHHHHHHHHHHHHHHhhc-------cCChhHHH
Q 008185 210 -ALPNLMACVLLSNLGASITEVAKDALVAEYGQ-KNGIVGLQSYAFMAAASGGILGNLFGGYFLL-------KTPPTTMF 280 (574)
Q Consensus 210 -~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~-~~~rg~~~s~~~~~~~~G~~igp~igg~l~~-------~~gwr~~f 280 (574)
.+.++++..++..++.+..+++..++.+|+++ ++||.++.++.+.+..+|..+++.++..+.+ ..+|++..
T Consensus 104 ~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~ 183 (473)
T PRK10429 104 AQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFT 183 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHH
Confidence 12233444455577888888899999999994 6899998887667667776666555443321 23688888
Q ss_pred HHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccce
Q 008185 281 LVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMF 359 (574)
Q Consensus 281 ~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~ 359 (574)
++.+++.++..++. +..||++.+.....+ +..+.+.++.+ +.+++||.++..++..++.+..........+
T Consensus 184 ~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~-----~~~~~~~~~~~---~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~ 255 (473)
T PRK10429 184 LVLIAFFIVSTIITLRNVHEVYSSDNQVSA-----EGSHLTLKDIV---ALIYKNDQLSCLLGMALAYNIASNIINGFAI 255 (473)
T ss_pred HHHHHHHHHHHHHHHcCceecCCccccccc-----cccCCCHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 88877777666555 457886432110000 00011233332 2345777776655544442322223333344
Q ss_pred eehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEee
Q 008185 360 CYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLC 439 (574)
Q Consensus 360 ~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~ 439 (574)
||.+...+ ++...++......++.+++.++.+++.||+++|+.+.++.++..+..+....... ....+.+..+.
T Consensus 256 y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i 329 (473)
T PRK10429 256 YYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGL-----AAPHNALLIVI 329 (473)
T ss_pred eEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhc-----cCchhHHHHHH
Confidence 55554444 4556666666667888888899999999999999987776554433332211100 00011111111
Q ss_pred hhHHHHHHHHhhHHHHHHHHHhhcC-------CChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCC---h--
Q 008185 440 FAGLAETLAQFKLLPFSMLLARLCP-------QGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSS---L-- 507 (574)
Q Consensus 440 ~~~l~~~~~~~~~~p~~~l~~~~~p-------~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~---l-- 507 (574)
...+.............++++|.++ ++.+|..+|..+.+.++|.++++.+.|.+.+..|++.+.-+. +
T Consensus 330 ~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy~~~~~q~~~~~~~ 409 (473)
T PRK10429 330 AGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGYVPNVEQSAQTLLG 409 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHH
Confidence 1112111112222333456677654 567899999999999999999999999999999986432111 1
Q ss_pred --hHHHHHHHHHHHHHHHHH-HhcCCCHHHHHHHH
Q 008185 508 --PVGIVIQFLAALLPLIWI-HNVPMSETIIEKGR 539 (574)
Q Consensus 508 --~~~~li~~~~~ll~l~~~-~~vp~~~~~~~~~~ 539 (574)
.....+.+++.+++++++ .++|-++++.+|.+
T Consensus 410 i~~~~~~~p~~~~~~~~~~~~~~y~l~~~~~~~i~ 444 (473)
T PRK10429 410 MQFIMIGLPTLFFMITLVLYFRYYRLNGDFLRRIQ 444 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeCCHHHHHHHH
Confidence 122233444444555544 57888887766533
No 31
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.94 E-value=1.8e-23 Score=221.52 Aligned_cols=363 Identities=15% Similarity=0.052 Sum_probs=227.0
Q ss_pred HHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhhhhhheeeccccccC-CCccchhHhHHHHHH
Q 008185 117 LVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVAKPLYGILSDALYIG-GAHRIPYICIGVFLQ 194 (574)
Q Consensus 117 ~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~pl~G~lsD~~~~~-G~rRk~~l~i~~~~~ 194 (574)
...+...|+.||+.. +..+.++.++++ .|.|.+++|+. ++..+++.++++++|+.|++... .+|||.+++...++.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~-~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFL-PLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHH-HHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHH
Confidence 344777899999985 777777777776 69999999987 44445666666666666664222 236666655443433
Q ss_pred HHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccC
Q 008185 195 ILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKT 274 (574)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~ 274 (574)
.++...++..........+++...++.++..+..|+..|++..|..++++++...+....+..+|.++|+...+++.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~ 160 (390)
T TIGR02718 81 SACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF 160 (390)
T ss_pred HHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 32333333221111112233444555667788899999999889888777777777777777889999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccc
Q 008185 275 PPTTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVL 354 (574)
Q Consensus 275 gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~ 354 (574)
|||..|++.+++.++..+..++++|++.+..+. + ++..++.++.+++|.++......++........
T Consensus 161 gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~ 227 (390)
T TIGR02718 161 GQRPAFLLVACVPLASLVCVLWLKDRAVASPEA-------P------LARRASLFRFFRRPLAWSLLALALLSAMTAVSG 227 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCCcCcccc-------c------hhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHH
Confidence 999999999988877666655555443211100 0 001123455677887766555444421111112
Q ss_pred cccceeehccccCCCchhHHHHHHHHH-HHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCc
Q 008185 355 SGSMFCYQTQCLNINPSVIGMSRVIGQ-SMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPN 433 (574)
Q Consensus 355 ~~~~~~~~~~~~g~s~~~~gl~~i~~~-ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~ 433 (574)
....+.|..+ .|+++++.|+...... ++.+++..+.+++.||+++|+.+..+.++.+...+........ ...+.
T Consensus 228 ~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~ 302 (390)
T TIGR02718 228 FGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAF----WLAPG 302 (390)
T ss_pred HHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHc----ccCCc
Confidence 2222335554 7999999999866554 5677788889999999999998877655443322221111100 00111
Q ss_pred ceEEeehhHHHHHHHHhhHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 434 EVFVLCFAGLAETLAQFKLLPFSMLLARLCPQ-GCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 434 ~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~-~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
.........+.....+....+......+.+++ +.+|+.+++.++..++|..+||.++|.+.+..|+
T Consensus 303 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~ 369 (390)
T TIGR02718 303 IAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGY 369 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 11101111111111223333444555666766 8899999999999999999999999999998874
No 32
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=4.8e-25 Score=224.50 Aligned_cols=366 Identities=14% Similarity=0.075 Sum_probs=255.8
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
+|++.+.+.++|...++.= -...+.| .+.++.++|.+++|++.+.+.+.|.+ +.++|.+|||. +-|.++..+
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p-~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-----npr~fm~~g 100 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMP-ALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-----NPRYFMAFG 100 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-----CCceeehHH
Confidence 6777777778887666543 4556666 45666889999999999999999988 88999999984 566677778
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHH--H
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFG--G 268 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~ig--g 268 (574)
.++++++.+++++.++ +..+.++.++.++.-+...++....++..++++|||+..++++.+-++|+.+.|++. +
T Consensus 101 Lilsai~nil~Gfs~s----~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la 176 (448)
T COG2271 101 LILSAIVNILFGFSPS----LFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLA 176 (448)
T ss_pred HHHHHHHHHHHhhhhH----HHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHH
Confidence 8889999988888752 555666677776666666666678889999999999999999999999999999999 8
Q ss_pred HhhccCChhHHHHHHHHHHHHHHHHh-hhcccccccccccchhcc-----hh-hhhhh----hHHHHHHHHHHHHcchhh
Q 008185 269 YFLLKTPPTTMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNV-----AS-KSIAQ----SIKKQFSDLIATIGEESI 337 (574)
Q Consensus 269 ~l~~~~gwr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~-----~~-~~~~~----~~~~~~~~~~~~~~~~~v 337 (574)
++..+.+||..|++-+++++++.++. +.++++|.....++-++. +. +..++ +.++.. .+..++||.+
T Consensus 177 ~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~--~~YVL~Nk~i 254 (448)
T COG2271 177 FFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIF--VKYVLKNKLI 254 (448)
T ss_pred HHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHH--HHHHHcChHH
Confidence 88888899999999999998888775 467887754332211110 00 00000 112222 2236899999
Q ss_pred HHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC--CchhHHHHHHHHHHHHH
Q 008185 338 SYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKV--PLRKLVGAVQILYASSL 415 (574)
Q Consensus 338 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~--~~r~ll~~~~ll~~~~~ 415 (574)
|.+++.-++.|.+-+....-.|.|..+..|+|....+......=++.+.|+.+.+++.||. ++|....+.+.+.....
T Consensus 255 W~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~ 334 (448)
T COG2271 255 WLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITAS 334 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHH
Confidence 9887655555776666666677888999999998888877777777777777777777764 34544333322222222
Q ss_pred hHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHH---HHHHhhcCCChhHHHHHHHHHHHHh-HHHHHHHHHH
Q 008185 416 LLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFS---MLLARLCPQGCEGSLTSFSASALCL-SSIASGFLGV 491 (574)
Q Consensus 416 l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~---~l~~~~~p~~~~gt~~gl~~~~~~l-g~~lg~~i~g 491 (574)
+...++ .++.-+. ....+...+|...+.|-+ ....|..|++..|++.|+...+..+ |.+.+....|
T Consensus 335 ~~~~w~---------~~~~~~~-l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g 404 (448)
T COG2271 335 LVLYWL---------APNGSYL-LDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLG 404 (448)
T ss_pred HHHHHc---------CCCccHH-HHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcce
Confidence 221111 1222111 111222223333344432 3467899999999999999999998 7788888878
Q ss_pred HHHHhhCcc
Q 008185 492 GLASLTGIT 500 (574)
Q Consensus 492 ~l~~~~g~~ 500 (574)
.+.|.+|+.
T Consensus 405 ~i~d~~gW~ 413 (448)
T COG2271 405 YIADTWGWD 413 (448)
T ss_pred eeEecCCCc
Confidence 887776653
No 33
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.94 E-value=6.2e-24 Score=224.59 Aligned_cols=338 Identities=13% Similarity=0.066 Sum_probs=226.1
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
+.+.++..++.. .....++ .+++++|++..+.++..+.+.++..+ +|++|+++||+ +||+.+.++.++..++
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~-~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 8 LALGTFGLGMAEFGIMGVLT-ELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-----SLKHILLFLVALCVIG 81 (382)
T ss_pred HHHHHHHHHhhHHHHHhChH-HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-----ccHHHHHHHHHHHHHH
Confidence 455556556554 4444444 46777999999999999999998876 88999999984 6777787788888888
Q ss_pred HHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 008185 198 WGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPT 277 (574)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr 277 (574)
..+.+..++ ++.+++.|++.+++.+...+.....+.|..++++|++++++...+..+|..+||.+++++.+..|||
T Consensus 82 ~~l~~~~~~----~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr 157 (382)
T PRK10091 82 NAMFTLSSS----YLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWR 157 (382)
T ss_pred HHHHHHhCc----HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHH
Confidence 777766643 5778889999988877766666777888888888999999998989999999999999999889999
Q ss_pred HHHHHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccc
Q 008185 278 TMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSG 356 (574)
Q Consensus 278 ~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~ 356 (574)
++|++.+++.++..+.. +++||.+.... . ..++. ++.++++..+......++.+........
T Consensus 158 ~~f~~~~~~~~~~~~~~~~~lp~~~~~~~---------~----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (382)
T PRK10091 158 YTFLLIAVFNIAVLASIYFWVPDIRDEAK---------G----GLREQ----FHFLRSPAPWLIFAATMFGNAGVFAWFS 220 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcccc---------c----CHHHH----HHHhcChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988777666554 46787532110 0 01111 1234566555443333222221111122
Q ss_pred cceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceE
Q 008185 357 SMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVF 436 (574)
Q Consensus 357 ~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~ 436 (574)
..+.++.+.+|+++.+.++......++.+++..+.+++.||+++++++..+.++.++..+....... ..+.
T Consensus 221 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~---------~~~~ 291 (382)
T PRK10091 221 YIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGG---------MKTA 291 (382)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHh---------hHHH
Confidence 2233455668999999999998899999999999999999999998887776655444322111110 0111
Q ss_pred EeehhHHHHHHHH-hhHHHHHHH-HHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Q 008185 437 VLCFAGLAETLAQ-FKLLPFSML-LARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASL 496 (574)
Q Consensus 437 ~l~~~~l~~~~~~-~~~~p~~~l-~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~ 496 (574)
.+.. .+....+. ....|.... ..+..|++..+.. ..+...++|.++||.++|.+.+.
T Consensus 292 ~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~ 350 (382)
T PRK10091 292 SLIF-AFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTL 350 (382)
T ss_pred HHHH-HHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHc
Confidence 1111 11111111 112233322 3333444555554 34677899999999999999885
No 34
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.1e-23 Score=221.36 Aligned_cols=388 Identities=17% Similarity=0.128 Sum_probs=271.5
Q ss_pred chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCcc--
Q 008185 132 FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAA-- 208 (574)
Q Consensus 132 ~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~-- 208 (574)
+...-+.+++.|.+|+++..+|.++.+.-+-.++ +|+.|.++||.+.+.+|||||++.+.+..++...++...++..
T Consensus 30 ~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~ 109 (467)
T COG2211 30 IVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMT 109 (467)
T ss_pred HHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccC
Confidence 4445566788999999999999999888776555 9999999999988877999999999888888888777776422
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cCccchHHHHHHHHHHHHHHHHHHHHHhhc-------cCChhHHH
Q 008185 209 KALPNLMACVLLSNLGASITEVAKDALVAEYGQK-NGIVGLQSYAFMAAASGGILGNLFGGYFLL-------KTPPTTMF 280 (574)
Q Consensus 209 ~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~-~~rg~~~s~~~~~~~~G~~igp~igg~l~~-------~~gwr~~f 280 (574)
.......+..++.+++.+..+++..++.++++++ +||.+..+....+..+|..+..++.+.+.. ..||+.+.
T Consensus 110 ~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~ 189 (467)
T COG2211 110 GKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTA 189 (467)
T ss_pred cchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHH
Confidence 1233345566777889999999999999999865 899999998888888886666555554442 35899888
Q ss_pred HHHHHHHHHHHHHhh-hcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccce
Q 008185 281 LVFAVLLSLQLAISF-SAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMF 359 (574)
Q Consensus 281 ~i~ai~~~~~~~~~~-~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~ 359 (574)
++.++++.+..+.++ -++|++.+....+ .+.+...+ ..+...++||.....++..++.+.......+.+.
T Consensus 190 ~~~~vi~~i~~l~~~~~v~ER~~~~~~~~------~~~~~~~~---~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~ 260 (467)
T COG2211 190 LVLGVIGVILLLFCFFNVKERVVETQPTK------TGVKLKLK---DSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMV 260 (467)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCccccCc------ccccccHH---HHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 888888877777765 4899875332110 00111122 2233356777776666544443444444455667
Q ss_pred eehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEee
Q 008185 360 CYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLC 439 (574)
Q Consensus 360 ~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~ 439 (574)
||.+..+|.++....+.......+.+++..++.++.+|+++|+++.++.++.++..+..++.. ..+..+.++
T Consensus 261 yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~--------~~~~~l~~~ 332 (467)
T COG2211 261 YYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP--------AGSVVLIVV 332 (467)
T ss_pred eeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc--------CcchHHHHH
Confidence 888888998888888888888889999899999999999999999999887777665433221 111222222
Q ss_pred hhHHHHHHHHhhHHHH-HHHHHhh-------cCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCC-CCChh--
Q 008185 440 FAGLAETLAQFKLLPF-SMLLARL-------CPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGD-YSSLP-- 508 (574)
Q Consensus 440 ~~~l~~~~~~~~~~p~-~~l~~~~-------~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~-~~~l~-- 508 (574)
...+. .++.....+. +++++|. ..++.+|..+|.++.+.++|.+++..+.|++.+..|+.++. -+...
T Consensus 333 ~~~i~-~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv~~~~~Q~~~al 411 (467)
T COG2211 333 ALIIA-GVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGYVPNVSAQSASAL 411 (467)
T ss_pred HHHHH-HHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence 21222 2221111111 2333332 46788999999999999999999999999999999987654 23222
Q ss_pred -----HHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Q 008185 509 -----VGIVIQFLAALLPLIWIHNVPMSETIIEK 537 (574)
Q Consensus 509 -----~~~li~~~~~ll~l~~~~~vp~~~~~~~~ 537 (574)
.++++.+++.++.++.+.+.|-+++..++
T Consensus 412 ~gI~~~~~~~Pa~l~l~~~i~~~~y~L~~~~~~~ 445 (467)
T COG2211 412 FGIRFLFIILPALLLLLAAIIIFFYKLNEKMHKE 445 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHH
Confidence 33445555666666667788888776654
No 35
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=1.1e-23 Score=224.06 Aligned_cols=330 Identities=16% Similarity=0.171 Sum_probs=219.0
Q ss_pred chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhh-hhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccch
Q 008185 132 FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMV-AKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKA 210 (574)
Q Consensus 132 ~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~-~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~ 210 (574)
...+.++.++++++|.|+.+.|+..+.+.++.. ++|+.|+++||+ +||+.+.++..+..++...+...+ +
T Consensus 28 ~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-----g~k~~l~~~~~~~~~~~~~~~~~~-~--- 98 (400)
T PRK11646 28 VVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-----GAKPMIVTGMLMRAAGFATMAIAH-E--- 98 (400)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-----CchHHHHHHHHHHHHHHHHHHHhc-c---
Confidence 344555557778899999999999999888764 489999999985 567777778777777777666543 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHH
Q 008185 211 LPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQ 290 (574)
Q Consensus 211 ~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~ 290 (574)
.+.+++.|++.+++.+...+...+++.|..++++|++++++......+|..+||.++|++. ..|||+.|++.++..++.
T Consensus 99 ~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~ 177 (400)
T PRK11646 99 PWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLA 177 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 5667788999888888777777888999999999999999999999999999999999998 679999999988777665
Q ss_pred HHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCC
Q 008185 291 LAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNIN 369 (574)
Q Consensus 291 ~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s 369 (574)
.++. +++||.+.... .++.++ .+++.+++|.++...+..+..+.........+|.|.++..+ +
T Consensus 178 ~i~~~~~~~~~~~~~~------------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~ 241 (400)
T PRK11646 178 AAFNAWLLPAYKLSTV------------RTPVRE---GMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-S 241 (400)
T ss_pred HHHHHHhCCccccccc------------chhhHH---HHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-C
Confidence 5443 45666321110 011111 23344667776554333222111111112234556665444 6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHH-hcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHH
Q 008185 370 PSVIGMSRVIGQSMLLSLTVFYDRYW-KKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLA 448 (574)
Q Consensus 370 ~~~~gl~~i~~~ig~lig~~l~~~l~-~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~ 448 (574)
+.+.|+.+....++.+.+....+++. +|++.++.+..+.++..+..+. +... ++.+.... ..+....+
T Consensus 242 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~-l~~~---------~~~~~~~~-~~~l~~~g 310 (400)
T PRK11646 242 PSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFP-IGMV---------SNLQQLFT-LICLFYIG 310 (400)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHH-HHHh---------hhHHHHHH-HHHHHHHH
Confidence 77888877666665554444445554 5566555555554444433221 1111 11111111 11111222
Q ss_pred HhhHHH-HHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Q 008185 449 QFKLLP-FSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 449 ~~~~~p-~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g 498 (574)
.....| ..++..+..|++.+|+++|+++...++|.++||.++|.+.+..+
T Consensus 311 ~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~ 361 (400)
T PRK11646 311 SIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGK 361 (400)
T ss_pred HHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHh
Confidence 222333 35778899999999999999999999999999999999999753
No 36
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.93 E-value=2.1e-23 Score=219.56 Aligned_cols=343 Identities=20% Similarity=0.166 Sum_probs=228.8
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
+....+...+.. +..+..+ .+.+++|.++.+.+++.+.+.++..+ +|++|+++||+ +||+++..+.++..++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-----g~r~~~~~~~~~~~~~ 83 (385)
T TIGR00710 10 LGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-----GRRPVLLLGLFIFALS 83 (385)
T ss_pred HHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-----CChHHHHHHHHHHHHH
Confidence 344444444443 3444444 56777999999999999999988766 88999999985 5677777777777777
Q ss_pred HHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 008185 198 WGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPT 277 (574)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr 277 (574)
..+....++ .+.+++.|++.+++.+...+...+++.|..++++|++++++.+....+|..+||.+++++.+..+||
T Consensus 84 ~~~~~~~~~----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 159 (385)
T TIGR00710 84 SLGLALSNN----IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWH 159 (385)
T ss_pred HHHHHHHcc----HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 766655532 5667888999999988888888999999999999999999999999999999999999999889999
Q ss_pred HHHHHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccc
Q 008185 278 TMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSG 356 (574)
Q Consensus 278 ~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~ 356 (574)
++|++.++..++..+.. ++.||++....+. ..++..+..++.+++|.++...+...+.+........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (385)
T TIGR00710 160 AIFAFLSLAGILLSALIFFILPETLPYEARI------------QISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFS 227 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCcccC------------CHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHH
Confidence 99999888777666654 4577764322110 0111223344556777776654433332222222233
Q ss_pred cceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceE
Q 008185 357 SMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVF 436 (574)
Q Consensus 357 ~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~ 436 (574)
..+.+..+.+|+++.+.|+......++.+++..+.+++.+|+++|+.+..+.++..+..+....... . ..+ .+.
T Consensus 228 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~-~~~ 301 (385)
T TIGR00710 228 GAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAI-L----GLG-SWA 301 (385)
T ss_pred cChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH-h----ccc-hHH
Confidence 3455666789999999999988888999999999999999999998877665554443332211110 0 000 111
Q ss_pred EeehhHHHHHHHHhhHHH-HHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHH
Q 008185 437 VLCFAGLAETLAQFKLLP-FSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGV 491 (574)
Q Consensus 437 ~l~~~~l~~~~~~~~~~p-~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g 491 (574)
......+..+++.....+ ......|..| +.+|++.++.+.....++.+.+.+.+
T Consensus 302 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 302 MIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111222222222 2344556665 67899999999888765544443333
No 37
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.93 E-value=5.8e-23 Score=219.51 Aligned_cols=345 Identities=12% Similarity=0.030 Sum_probs=229.4
Q ss_pred HHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhh
Q 008185 125 WVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLA 202 (574)
Q Consensus 125 f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~ 202 (574)
+...+.. +..+.++ .+.+++|.+..+.++..+++.+++.+ +|++|+++||+ +||++++.+.++..++..+.+
T Consensus 26 ~~~~~~~~~~~p~l~-~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~~l~~~~~~~~~~~~~~~ 99 (413)
T PRK15403 26 FAAYLTTDLIQPGII-NVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-----GRRPVLITGALIFTLACAATL 99 (413)
T ss_pred HHHHHHHHhhccCHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-----CchHHHHHHHHHHHHHHHHHH
Confidence 3333433 5555555 46778999999999999999998866 88999999985 567777777777777777666
Q ss_pred cccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHH
Q 008185 203 LFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLV 282 (574)
Q Consensus 203 ~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i 282 (574)
..++ ++.++++|++++++.+.......+.+.|..++++|++++++......+|+++||++++++.+..|||+.|++
T Consensus 100 ~a~~----~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~ 175 (413)
T PRK15403 100 FTTS----MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAI 175 (413)
T ss_pred HcCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 5532 567889999998887765555667788998888899999999999999999999999999988899999999
Q ss_pred HHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceee
Q 008185 283 FAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCY 361 (574)
Q Consensus 283 ~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~ 361 (574)
.++..++..+.. +++||++....+ + . ..+...++.++.++||.++...+..++.+.....+....|++
T Consensus 176 ~~~~~~i~~~~~~~~lp~~~~~~~~----~---~----~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~ 244 (413)
T PRK15403 176 IAVMGLIAFVGLLLAMPETVKRGAV----P---F----SAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVI 244 (413)
T ss_pred HHHHHHHHHHHHHHhCCCCccccCC----C---C----ChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 988877766553 468887532110 0 0 111223455567889988876655444333333333445667
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
.++.+|+++.+.|+..+...++.+++..+.+++.+|...++.......+..++.++. ..... . .++.+......
T Consensus 245 l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~-~~~~~----~-~~~~~~~~~~~ 318 (413)
T PRK15403 245 LIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALL-IVGNL----L-WPHVWLWSVLG 318 (413)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHH-HHHHH----H-ccccHHHHHHH
Confidence 788899999999999888888888888888888766555554332222221111111 11000 0 01111111111
Q ss_pred HHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Q 008185 442 GLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASL 496 (574)
Q Consensus 442 ~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~ 496 (574)
....+.+.....|...-.+.......+|++.|+++..+..+..+++..++.+.+.
T Consensus 319 ~~l~~~G~~~~~p~~~~~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 319 TSLYAFGIGLIFPTLFRFTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred HHHHHHHHHHHhHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1112223233333322122222233579999999999999999999999887765
No 38
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.93 E-value=3.3e-23 Score=219.58 Aligned_cols=330 Identities=16% Similarity=0.123 Sum_probs=219.1
Q ss_pred chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccch
Q 008185 132 FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKA 210 (574)
Q Consensus 132 ~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~ 210 (574)
+....++ .+.+++|.+..+.++..+++.++..+ .|+.|+++||+ +||++++++.++..++.......++
T Consensus 21 ~~~~~lp-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-----g~r~~l~~~~~~~~i~~~~~~~~~~---- 90 (392)
T PRK10473 21 MYLVGLP-RIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-----GRKPVAIPGAALFIIASLLCSLAET---- 90 (392)
T ss_pred HHhhhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-----CChHHHHHHHHHHHHHHHHHHHhCc----
Confidence 3334454 45667999999999999999988766 88999999985 5677777777777777766655432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHH
Q 008185 211 LPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQ 290 (574)
Q Consensus 211 ~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~ 290 (574)
...+++.|++.+++.+.......+++.|..++++|++++++.+....+|.+++|.+++.+.+..|||+.|++.+++.++.
T Consensus 91 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~ 170 (392)
T PRK10473 91 SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILV 170 (392)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHH
Confidence 45567889998888887777778899999999999999999999889999999999999888889999999998887776
Q ss_pred HHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCC
Q 008185 291 LAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNIN 369 (574)
Q Consensus 291 ~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s 369 (574)
.++. +++||++....+ + + .. . .++.++.++++.++...+...+.+.....+....+++..+.+|++
T Consensus 171 ~~~~~~~~~~~~~~~~~-~-~----~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 237 (392)
T PRK10473 171 LLLSLFILKETRPARAP-A-A----SS----K---PRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFS 237 (392)
T ss_pred HHHHHHHcCCCCCcccC-C-c----cc----h---HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCC
Confidence 6654 567886532210 0 0 00 0 112223456666554433332222211122223345566778999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHH
Q 008185 370 PSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQ 449 (574)
Q Consensus 370 ~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 449 (574)
+.+.+.......++.+++..+.+++.||+++|+.+..+.++..+..+... ..... ....+....+. .+
T Consensus 238 ~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~l~~--~g- 305 (392)
T PRK10473 238 RGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLA-LSPSH--------AVSLFGITLIC--AG- 305 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHH--------HHHHHHHHHHH--HH-
Confidence 99999988888889999999999999999999988777665544433221 11100 00001111111 11
Q ss_pred hhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 450 FKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 450 ~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
...........+..|.+.++ |...+...+++.+|+.+++++.+.+|.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~ 352 (392)
T PRK10473 306 FSVGFGVAMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGI 352 (392)
T ss_pred HHHHhHHHHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 11111123334555654443 344455667888888888888888774
No 39
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.93 E-value=1.5e-23 Score=222.55 Aligned_cols=371 Identities=15% Similarity=0.054 Sum_probs=226.4
Q ss_pred hhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHH
Q 008185 114 KQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGV 191 (574)
Q Consensus 114 ~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~ 191 (574)
|.+.. +.+.++...+.. +..+.++.++++++|.|+.+.+++.+++.+++.+ +|+.|+++||+ +||+.+.++.
T Consensus 15 ~~~~~-l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-----g~r~~l~~~~ 88 (399)
T PRK05122 15 LRIVS-IVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-----GPKKAVVFGL 88 (399)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-----CCcchHHHHH
Confidence 33444 555556656655 6666677678888999999999999999998766 89999999985 5666666666
Q ss_pred HHHHHHHHHhhccc--Cc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHH
Q 008185 192 FLQILSWGPLALFP--VA--AKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFG 267 (574)
Q Consensus 192 ~~~~~~~~~~~~~~--~~--~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~ig 267 (574)
++.+++...++... ++ ..++..+++.|++.++|.+...+.....+.|..++++|++++++...+..+|.++||.++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 168 (399)
T PRK05122 89 CGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLG 168 (399)
T ss_pred HHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHH
Confidence 65555444333321 11 012456788899999998888777778889999999999999988888889999999999
Q ss_pred HHhhccCChhHHHHHHHHHHHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhH
Q 008185 268 GYFLLKTPPTTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVAS 347 (574)
Q Consensus 268 g~l~~~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~ 347 (574)
+++.+..|||+.+++.+++.++..+.....||++.. + ++ +. +.++..++.+ ...... .++. +.
T Consensus 169 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~----~~----~~~~~~~~~~---~~~~~~--~~~~-~~ 231 (399)
T PRK05122 169 VLLYHWGGLAGLGLLIMLLALLGLLLARPRPAVPPV--K-GE----RL----PFRRVLGRVW---PYGMGL--ALAS-IG 231 (399)
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCCCCC--C-cc----ch----hHHHHHHHHH---HHHHHH--HHHH-HH
Confidence 999999999999988766554333322223332211 0 00 00 1111111111 111000 0111 11
Q ss_pred hhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhc
Q 008185 348 VAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINL 427 (574)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~ 427 (574)
+... ....+.|.. ..|++ ..+.......++.+++..+.+++.+|+++|+.+..+.++..+..+. ....
T Consensus 232 ~~~~---~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~-~~~~----- 299 (399)
T PRK05122 232 FGTI---ATFITLYYA-ARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLL-LWLA----- 299 (399)
T ss_pred HHHH---HHHHHHHHH-Hcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH-HHHh-----
Confidence 1111 111122232 24543 3345555666777888888899999999888877665544433221 1111
Q ss_pred ccCcCcceEEeehhHHHHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCC
Q 008185 428 QFGVPNEVFVLCFAGLAETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSS 506 (574)
Q Consensus 428 ~~~~~~~~~~l~~~~l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~ 506 (574)
++.+..+. ..+..+++.....|. .....+..|++.+|+++|+++...++|..+++.+.|.+.+..|+.
T Consensus 300 ----~~~~~~~~-~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~------ 368 (399)
T PRK05122 300 ----PSPWMALI-GAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYP------ 368 (399)
T ss_pred ----ccHHHHHH-HHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH------
Confidence 11111111 112222222222333 345678899999999999999999999999999999998876632
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCH
Q 008185 507 LPVGIVIQFLAALLPLIWIHNVPMSE 532 (574)
Q Consensus 507 l~~~~li~~~~~ll~l~~~~~vp~~~ 532 (574)
..+.+.+++.+++++....+++++
T Consensus 369 --~~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 369 --SIFLAAALAALLGLALTWLLYRRA 392 (399)
T ss_pred --HHHHHHHHHHHHHHHHHHHhcccc
Confidence 233333344444444444454433
No 40
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.93 E-value=4.2e-23 Score=221.96 Aligned_cols=356 Identities=14% Similarity=0.046 Sum_probs=215.6
Q ss_pred chhHHHHHHHHHHHhhhccchhhhhHHHHHHhcC---CChhHHHHHHHHhhhhhh---h-hhhheeeccccccCCCccch
Q 008185 113 NKQMLVLCGLGYWVQGFRCFPWLALNFHMAHNLS---LHPSTLQLVQNSGNLPMV---A-KPLYGILSDALYIGGAHRIP 185 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~---~s~~~~~l~~s~~~l~~~---~-~pl~G~lsD~~~~~G~rRk~ 185 (574)
++.......++++...++........+.+.++++ .+..+.+...+++...+. + ++++|+++||+ +||+
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-----Grr~ 94 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-----GRKK 94 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CcHH
Confidence 4444444566777777776223333346677774 555544444444433333 4 56789999995 6777
Q ss_pred hHhHHHHHHHHHHHHhhcccCcc----chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHH
Q 008185 186 YICIGVFLQILSWGPLALFPVAA----KALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGI 261 (574)
Q Consensus 186 ~l~i~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~ 261 (574)
.+.++.++..++..+.++.++.. .....++++|+++++|.+...+...+++.|..|+++||.+.++...+..+|.+
T Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~ 174 (432)
T PRK10406 95 SMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQL 174 (432)
T ss_pred HHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHH
Confidence 77778888777777777665421 11235788899999998887777889999999999999999988887788888
Q ss_pred HHHHHHHHhh--------ccCChhHHHHHHHHHHHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHc
Q 008185 262 LGNLFGGYFL--------LKTPPTTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIG 333 (574)
Q Consensus 262 igp~igg~l~--------~~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (574)
++++++..+. +..|||++|++.+++.++...+...+||++....+. +. + + .+++++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~-------~~--~--~---~~~~~l~~ 240 (432)
T PRK10406 175 LALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRA-------LK--E--A---GSLKGLWR 240 (432)
T ss_pred HHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhh-------hc--c--c---ccHHHHHh
Confidence 8887765543 257999999998776665544344577764321100 00 0 0 12233455
Q ss_pred chhhHHHHHHHHhH-hhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 008185 334 EESISYPLTWLVAS-VAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYA 412 (574)
Q Consensus 334 ~~~v~~~~l~~~l~-~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~ 412 (574)
+++.+...+...+. ....+.+...+|.|+.+.+|++..+.+.......++..++..+.+++.||+++|+.+.++.++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~ 320 (432)
T PRK10406 241 NRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAA 320 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 66555433322221 22222233334555666789998888887766666667777788999999999987766544332
Q ss_pred HHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHh-HHHHHHHHHH
Q 008185 413 SSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCL-SSIASGFLGV 491 (574)
Q Consensus 413 ~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~l-g~~lg~~i~g 491 (574)
+..+........ ..+....+....+..+.......+...+.+|.+|++.||+++|+.+.+.++ .+...|.+.+
T Consensus 321 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~ 394 (432)
T PRK10406 321 LFTVPILSALQN------VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL 394 (432)
T ss_pred HHHHHHHHHHHc------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH
Confidence 222211111110 011111011111111111122223446688999999999999999887764 3445777777
Q ss_pred HH
Q 008185 492 GL 493 (574)
Q Consensus 492 ~l 493 (574)
.+
T Consensus 395 ~l 396 (432)
T PRK10406 395 SL 396 (432)
T ss_pred HH
Confidence 54
No 41
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.93 E-value=1.3e-23 Score=220.89 Aligned_cols=322 Identities=16% Similarity=0.115 Sum_probs=204.0
Q ss_pred HHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHH
Q 008185 139 FHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMAC 217 (574)
Q Consensus 139 ~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 217 (574)
+.+++|+|+|+.+.|++.+.+.+++.+ +++.|+++||+ +||+.+. +.+...+...+...... ++..++++
T Consensus 15 p~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-----grr~~~~-~~~~~~~~~~~~~~~~~---~~~~l~~~ 85 (368)
T TIGR00903 15 SLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-----FKRWFLF-GSLATFAAAAGRLLDPF---NYEWLLAC 85 (368)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cchHHHH-HHHHHHHHHHHHHHHhc---cHHHHHHH
Confidence 356778999999999999999998866 78899999995 4555554 33333333222222212 26778999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHh-hh
Q 008185 218 VLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAIS-FS 296 (574)
Q Consensus 218 ~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~-~~ 296 (574)
|++.++|.+.. ......++|..++++|++++++...+..+|.++++++++++.+..|||+.|++.++++++..++. ++
T Consensus 86 R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~ 164 (368)
T TIGR00903 86 QLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAA 164 (368)
T ss_pred HHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99998887753 34455678999999999999999999999999999999999999999999999888887776654 57
Q ss_pred cccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHH
Q 008185 297 AREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMS 376 (574)
Q Consensus 297 lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~ 376 (574)
+||++++..+. .+. ++..+++++++++|.++...+..++.+...+.+..-.|.|+.+ .|++.. .+..
T Consensus 165 lp~~p~~~~~~-------~~~----~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~ 231 (368)
T TIGR00903 165 LPALPFQAAEG-------FGF----KDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDA 231 (368)
T ss_pred cCCCCCCCCCC-------cch----HHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHH
Confidence 89876432110 000 1112345567888988877666555444444444445556644 677764 4444
Q ss_pred -HHHHHHHHHHHHHHHHHHHhcCCchhHHHH-HHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHH
Q 008185 377 -RVIGQSMLLSLTVFYDRYWKKVPLRKLVGA-VQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLP 454 (574)
Q Consensus 377 -~i~~~ig~lig~~l~~~l~~r~~~r~ll~~-~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p 454 (574)
.+....+.+....+.+++.|| ++|+.... ..++.++..+ . +... .+....+....+..+........
T Consensus 232 ~~l~~~~g~~g~~~~~d~~~r~-~~r~~~~~~~~~~~a~~~~-~--~~~~-------~~~~~~~~~~~l~~~~~~~~~~~ 300 (368)
T TIGR00903 232 VALAILAGLIGVAVIPDRVARA-GLRSIYIRAAALLIAAFFL-A--LAFE-------LNRLALFAFIGIAGLLMLPAYAI 300 (368)
T ss_pred HHHHHHHHHHHHHHhhHHhhhh-hhHHHHHHHHHHHHHHHHH-H--HHHc-------cccHHHHHHHHHHHHhhhhhHHH
Confidence 333333444444555554333 43443332 2222222111 1 1100 01111111111111111112222
Q ss_pred HHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 008185 455 FSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLA 494 (574)
Q Consensus 455 ~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~ 494 (574)
...+.+|.+|++.||++.|+.++..++++.++|.+.+.+.
T Consensus 301 ~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 301 IMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred HHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 4567889999999999999999999999999998887666
No 42
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.93 E-value=1.5e-23 Score=219.17 Aligned_cols=331 Identities=14% Similarity=0.097 Sum_probs=214.4
Q ss_pred hhHHHHHHhcCCChhHHHHHHHHhhhhhhhhhhheeeccccccC--CCccchhHhHHHHHHHHHHHHhhcccCccchHHH
Q 008185 136 ALNFHMAHNLSLHPSTLQLVQNSGNLPMVAKPLYGILSDALYIG--GAHRIPYICIGVFLQILSWGPLALFPVAAKALPN 213 (574)
Q Consensus 136 ~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~pl~G~lsD~~~~~--G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 213 (574)
..+ .+.+++|+|.+++++...+ .+++.++|++|+++||++.+ | |||++++.+.++.++++..+++..+.. ..+.
T Consensus 10 ~~~-~~~~~~g~s~~~~g~~~~~-~~~~~~~~~~g~~~Dr~~~~~~G-rr~~~l~~~~~~~~~~~~~l~~~~~~~-~l~~ 85 (356)
T TIGR00901 10 TLP-YWLRSKNVSLKTIGFFSLV-GLPYSLKFLWSPLVDTVYLPFFG-RRRSWLVLTQVLLLSLLLILSFLVPST-DLPL 85 (356)
T ss_pred HHH-HHHHHcCCCHHHHHHHHHH-HHHHHHHHHHHHHHhcccCCCCC-ccHHHHHHHHHHHHHHHHHHHcCCcch-hHHH
Confidence 344 3455689999999998655 66777799999999997443 4 777777777777777766666654322 2444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCC--------hhHHHHHHHH
Q 008185 214 LMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTP--------PTTMFLVFAV 285 (574)
Q Consensus 214 l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~g--------wr~~f~i~ai 285 (574)
+....++.+++.+..+++.++++.|..++++|+.+.++...+..+|.++|+.+++.+.+..| ||++|++.++
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai 165 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTAL 165 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHH
Confidence 55556666778888899999999999999999999999999999999999999999988888 9999999988
Q ss_pred HHHHHHHHhh-hcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchh---hHHHHHHHHhHhhhcccccccceee
Q 008185 286 LLSLQLAISF-SAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEES---ISYPLTWLVASVAMVPVLSGSMFCY 361 (574)
Q Consensus 286 ~~~~~~~~~~-~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~l~~~l~~~~~~~~~~~~~~~ 361 (574)
..++..+..+ ..||+....... ++...+.++ .++..+++|. ++...+..++...........++.|
T Consensus 166 ~~l~~~~~~~~~~~e~~~~~~~~-------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (356)
T TIGR00901 166 LILPGLLVTLFLAKEPQEDASVP-------KPLTQAVLK---PIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLF 235 (356)
T ss_pred HHHHHHHHHHHhccCCCcccccc-------hhHHHHHHH---HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766555544 467753221100 000111122 2333445554 4443333332122222233344556
Q ss_pred hccccCCCchhHHHHHHH-HHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhh-hcccCcCcceEEee
Q 008185 362 QTQCLNINPSVIGMSRVI-GQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQI-NLQFGVPNEVFVLC 439 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~-~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~-~~~~~~~~~~~~l~ 439 (574)
..+ +|+++.+.|..... +.++.+++..+.+++.||+++|+.+..+.++.++...+........ +...+.++.+....
T Consensus 236 l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (356)
T TIGR00901 236 LLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFL 314 (356)
T ss_pred HHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHH
Confidence 665 89999999987654 4467788888889999999988887777666554433221111100 00000011111111
Q ss_pred hhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHh
Q 008185 440 FAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCL 481 (574)
Q Consensus 440 ~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~l 481 (574)
...+..+...+...+..++++|.+|++.+|+++|++++..++
T Consensus 315 ~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~ 356 (356)
T TIGR00901 315 TITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSAL 356 (356)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHhC
Confidence 111222222344555678899999999999999999887653
No 43
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.93 E-value=1.1e-23 Score=224.00 Aligned_cols=344 Identities=16% Similarity=0.148 Sum_probs=215.7
Q ss_pred HHHHHHhhhcc-chhhhhHHHHHHhcCCChhH-----HHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHH
Q 008185 121 GLGYWVQGFRC-FPWLALNFHMAHNLSLHPST-----LQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFL 193 (574)
Q Consensus 121 ~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~-----~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~ 193 (574)
.++.++.++.. +..+.++.+.+ ++|++..+ .+++.+++.++..+ +|++|+++||+ +||+.+..+.+.
T Consensus 20 ~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~~~~ 93 (408)
T PRK09874 20 WLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-----GRKIMLLRSALG 93 (408)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----CcHHHHHHHHHH
Confidence 33445555554 44445555554 48888654 47788888887655 89999999985 466666667766
Q ss_pred HHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008185 194 QILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLK 273 (574)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~ 273 (574)
..++..++....+ ++.+++.|++.+++.+.. ....+.+.|..++++|+.++++...+..+|.++||.+++.+.+.
T Consensus 94 ~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 168 (408)
T PRK09874 94 MGIVMVLMGLAQN----IWQFLILRALLGLLGGFV-PNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADS 168 (408)
T ss_pred HHHHHHHHHHHhh----HHHHHHHHHHHHHhhhhH-HhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666665554432 566778888887765543 44567788888889999999999999999999999999999888
Q ss_pred CChhHHHHHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhc-
Q 008185 274 TPPTTMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMV- 351 (574)
Q Consensus 274 ~gwr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~- 351 (574)
.+||+.|++.+++.++..+.. +++||+..+..+.+ .. ..++..+.+++|+++.......+.+...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (408)
T PRK09874 169 YGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKE---------ML----HMREVVTSLKNPKLVLSLFVTTLIIQVAT 235 (408)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchh---------hh----HHHHHHHhCcCCchHHHHHHHHHHHHHHH
Confidence 999999999988776665554 45777543221100 00 1122234456666654332222211111
Q ss_pred ccccccceeehccccCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcc
Q 008185 352 PVLSGSMFCYQTQCLNINP---SVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQ 428 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~g~s~---~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~ 428 (574)
......++.|..+..+... ...|+......++.+++....+++.||+++|+.+..+.++..+..+. ....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~~------ 308 (408)
T PRK09874 236 GSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIP-MSFV------ 308 (408)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH-HHHh------
Confidence 1111222333333222211 12344455556777788888899999999998887765544332221 1111
Q ss_pred cCcCcceEEeehhHHHHHHHHhhHHH-HHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 429 FGVPNEVFVLCFAGLAETLAQFKLLP-FSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 429 ~~~~~~~~~l~~~~l~~~~~~~~~~p-~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
++.+.... ..+..+++.....| ..+++.+..|++.+|+.+|++++..++|..+||.++|.+.+..|+
T Consensus 309 ---~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~ 376 (408)
T PRK09874 309 ---QTPLQLGI-LRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGF 376 (408)
T ss_pred ---ccHHHHHH-HHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcch
Confidence 11111111 11122222222333 345667888999999999999999999999999999999887664
No 44
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.93 E-value=8.3e-24 Score=230.17 Aligned_cols=363 Identities=13% Similarity=0.060 Sum_probs=250.0
Q ss_pred HHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHH
Q 008185 117 LVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQ 194 (574)
Q Consensus 117 ~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~ 194 (574)
+..+.++.+...++. +....++ .+.+++|.+..+.+++.+.+.++..+ .|++|+++||+ +||+.+.++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~~~~~ 77 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIP-TIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-----GTRRLFLISTFAF 77 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-----CcHHHHHHHHHHH
Confidence 444666677777766 5555555 55667999999999999999998766 78899999985 5667777777777
Q ss_pred HHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccC
Q 008185 195 ILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKT 274 (574)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~ 274 (574)
.++..+++..++ +..+++.|++.+++.+...+...+++.|..++++|+.+++++.....+|..+||.++|++.+..
T Consensus 78 ~~~~~~~~~~~~----~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 153 (485)
T TIGR00711 78 TLGSLLCGVAPN----LELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY 153 (485)
T ss_pred HHHHHHHhCcCC----HHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc
Confidence 777776665542 5677889999999988888888899999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHh-hhcccccccccccchh------------------cchhhhhhhh--H------------
Q 008185 275 PPTTMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQ------------------NVASKSIAQS--I------------ 321 (574)
Q Consensus 275 gwr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~------------------~~~~~~~~~~--~------------ 321 (574)
||||.|++.+++.++..++. +++||+++...++... +.++..+... .
T Consensus 154 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (485)
T TIGR00711 154 HWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAII 233 (485)
T ss_pred CceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHH
Confidence 99999999888776666554 4567653321110000 0000000000 0
Q ss_pred ---HHHHH-----HHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 008185 322 ---KKQFS-----DLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDR 393 (574)
Q Consensus 322 ---~~~~~-----~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~ 393 (574)
.+..+ ...+.+++|.++...+..++.+.........++.|+++.+|+++.+.|+......++.+++..+.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~ 313 (485)
T TIGR00711 234 AFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGR 313 (485)
T ss_pred HHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0123567776665554444423322333334566778889999999999999999999999999999
Q ss_pred HHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHH-HhhHHHHHHHHHhhcCCChhHHHH
Q 008185 394 YWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLA-QFKLLPFSMLLARLCPQGCEGSLT 472 (574)
Q Consensus 394 l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~p~~~l~~~~~p~~~~gt~~ 472 (574)
+.+|+++|+++..+.++.++...... ... . ............+..+++ +....|......+..|++.+|++.
T Consensus 314 l~~r~~~~~~~~~g~~~~~~~~~~~~-~~~--~----~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~ 386 (485)
T TIGR00711 314 MGDKIDPRKLVTIGLILYAVGFYWRA-FTF--T----PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGS 386 (485)
T ss_pred HHhhcCcHHHHHHHHHHHHHHHHHHh-ccC--C----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHH
Confidence 99999999887777655544433211 000 0 001111111112222222 233445556667888999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHh
Q 008185 473 SFSASALCLSSIASGFLGVGLASL 496 (574)
Q Consensus 473 gl~~~~~~lg~~lg~~i~g~l~~~ 496 (574)
|+.+..+++|+++|+.+.+.+.+.
T Consensus 387 ~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 387 SLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888774
No 45
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.93 E-value=1.4e-23 Score=222.82 Aligned_cols=375 Identities=13% Similarity=0.061 Sum_probs=241.1
Q ss_pred chhHHHHHHHHHHHhhhccchhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHH
Q 008185 113 NKQMLVLCGLGYWVQGFRCFPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGV 191 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~ 191 (574)
+|.+...++.+.+...+.....+..+ .+++++|+|..+.++..+.+.+++.+ .|+.|+++||+ +||+.+..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-----G~r~~l~~~~ 81 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPLLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-----SERRSVAISL 81 (393)
T ss_pred HHHHHHHHHHHHHcchhhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-----CchHHHHHHH
Confidence 55555545555544433333334444 56788999999999999999998876 88999999984 5777777888
Q ss_pred HHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhh
Q 008185 192 FLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFL 271 (574)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~ 271 (574)
.+..++..+.+++++ +..+++.|+++++|.+...+...+++.|..+ ++|+.+++++..+..+|+.+|+.+++++.
T Consensus 82 ~l~~~~~~~~~~a~~----~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~ 156 (393)
T PRK09705 82 LLIAVGALMRELYPQ----SALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLV 156 (393)
T ss_pred HHHHHHHHHHHHCcc----hHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888887754 5667888999999999887777777888775 78999999999988999999999999988
Q ss_pred ccC-ChhHHHHHHHHHHHHHHHHhhhc-ccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhh
Q 008185 272 LKT-PPTTMFLVFAVLLSLQLAISFSA-REESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVA 349 (574)
Q Consensus 272 ~~~-gwr~~f~i~ai~~~~~~~~~~~l-pEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~ 349 (574)
++. +||+.+.+.++..++..+..+.. ++++....+ + + .. .++.++++..+...+..++...
T Consensus 157 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~---~~-------~~~~l~~~~~~~l~~~~~~~~~ 219 (393)
T PRK09705 157 QHSETWYQTLAWWALPAVVALFAWWWQSAREVASSHK---T----T---TT-------PVRVVFTPRAWTLGVYFGLING 219 (393)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCccccC---C----C---cC-------CcccccCHhHHHHHHHHHHHHH
Confidence 875 89999877665544333322222 222111100 0 0 00 0122345555544333322111
Q ss_pred hcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhccc
Q 008185 350 MVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQF 429 (574)
Q Consensus 350 ~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~ 429 (574)
.........+.+..+ +|+++.+.|.......++.+++..+.+++.||.++|+....+..+..+..+.. .....
T Consensus 220 ~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~-~~~~~----- 292 (393)
T PRK09705 220 GYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGF-IWLPL----- 292 (393)
T ss_pred HHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHH-HHccc-----
Confidence 111222233445554 79999999999888999999999999999999999888776654443332211 11110
Q ss_pred CcCcceEEeehhHHHHHHHHhhHHHH-HHHHHhhc-CCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCCh
Q 008185 430 GVPNEVFVLCFAGLAETLAQFKLLPF-SMLLARLC-PQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSL 507 (574)
Q Consensus 430 ~~~~~~~~l~~~~l~~~~~~~~~~p~-~~l~~~~~-p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l 507 (574)
+... +. .+..+++.....|. .....+.. |++.+|+.+|+.+...+++..++|.+.|++.+..|. +.
T Consensus 293 ---~~~~-~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~----~~-- 360 (393)
T PRK09705 293 ---QLPV-LW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGN----YL-- 360 (393)
T ss_pred ---hHHH-HH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----ch--
Confidence 0000 00 11112222222232 23444555 467889999999999999999999999999998762 22
Q ss_pred hHHHHHHHHHHHHH-HHHHHhcCCCHHHH
Q 008185 508 PVGIVIQFLAALLP-LIWIHNVPMSETII 535 (574)
Q Consensus 508 ~~~~li~~~~~ll~-l~~~~~vp~~~~~~ 535 (574)
..+.+.++..++. .+.+.+.||++++.
T Consensus 361 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 361 -MDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred -HHHHHHHHHHHHHHHHHHHhccccccch
Confidence 2223332222222 22345677776543
No 46
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.93 E-value=7.7e-24 Score=221.30 Aligned_cols=355 Identities=13% Similarity=0.086 Sum_probs=228.7
Q ss_pred hHHHHHHHHHHHhhhccchhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHH
Q 008185 115 QMLVLCGLGYWVQGFRCFPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFL 193 (574)
Q Consensus 115 ~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~ 193 (574)
..+....+..+..+... ...+..+.+++++|++..+.+++.+++.+++.+ +|++|+++||+ +||+.+.++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-----G~r~~~~~~~~~ 77 (377)
T TIGR00890 4 YVLVGTVIMCFTSGYVY-TWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-----GPRAVAMLGGIL 77 (377)
T ss_pred EEeHHHHHHHHHhhHHh-hhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-----CccchhHHhHHH
Confidence 33443344444444433 223334467888999999999999999998876 88999999985 455666667777
Q ss_pred HHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008185 194 QILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLK 273 (574)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~ 273 (574)
..+.....+..++ ++.++++|++.+++.+.........+.+..+ ++|+.++++...+..+|.++++.+.+.+.+.
T Consensus 78 ~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 152 (377)
T TIGR00890 78 YGLGFTFYAIADS----LAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINL 152 (377)
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhc
Confidence 7777766666542 5667888988888877655444455566655 6799999999888889988777677777777
Q ss_pred CChhHHHHHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcc
Q 008185 274 TPPTTMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVP 352 (574)
Q Consensus 274 ~gwr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~ 352 (574)
.|||+.|++.+++.++..+.. +++||++.+..+++++ . +..+ +..++.+++|.++...+..++......
T Consensus 153 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (377)
T TIGR00890 153 EGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIE----V---SVKD---YTVWEMLRTPQFWVLYLSFFLNAVSGL 222 (377)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCcc----c---chhh---hhHHHHHcCccHHHHHHHHHHHhHHHH
Confidence 899999999988887776664 4565543221111000 0 0001 122345677776654443332111111
Q ss_pred cccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcC
Q 008185 353 VLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVP 432 (574)
Q Consensus 353 ~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~ 432 (574)
.....++.| .+.+|+++.+.+.......++.+++..+.+++.||+++|+.+..+.++..+..+.. ..... .
T Consensus 223 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~-~~~~~-------~ 293 (377)
T TIGR00890 223 LLIGLYKPY-GQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAM-LFIPM-------L 293 (377)
T ss_pred HHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH-HHccc-------c
Confidence 111112223 34578888888888888888999999999999999999988877766555443321 11110 0
Q ss_pred cceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 433 NEVFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 433 ~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
.....+....+.....+........+.+|..|++++|+++|+.+...++|..++|.+.|.+.+..|+
T Consensus 294 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 360 (377)
T TIGR00890 294 NDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGF 360 (377)
T ss_pred hhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhch
Confidence 0110001111111111122222345678999999999999999999999999999999999887764
No 47
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.93 E-value=3e-23 Score=220.32 Aligned_cols=349 Identities=13% Similarity=0.049 Sum_probs=228.4
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
+.++.++..+.. +.....+.. .++++.++.+.+++.+.+.+++.+ +|++|+++||+ +||+.++.+.++..++
T Consensus 8 l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-----grr~vl~~~~~~~~~~ 81 (393)
T PRK11195 8 IMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-----PKGRVMFIANGIKLLG 81 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-----CCchhhHHHHHHHHHH
Confidence 344455555533 333444434 456899999999999999999866 99999999995 5666676677666555
Q ss_pred HHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 008185 198 WGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPT 277 (574)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr 277 (574)
..++++..+ .++.|++++++.+...+...+++.|+.++++|++++++.+....+|.++||.++|++.+. .|+
T Consensus 82 ~~~~~~~~~-------~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~ 153 (393)
T PRK11195 82 CLLMLFGIH-------PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAE 153 (393)
T ss_pred HHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 554433321 267789999999999999999999999999999999999999999999999999999875 488
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhccccccc
Q 008185 278 TMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGS 357 (574)
Q Consensus 278 ~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~ 357 (574)
..+++.+...++..+..+.+||++.+..+.+. +... ..++..+..+.++++|.+........+.+.........
T Consensus 154 ~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (393)
T PRK11195 154 AALAVCALIYLLAALFNLFIPRLGARRPGQSW---NPIA---LLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFL 227 (393)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcccccccCC---CHHH---HHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHH
Confidence 88877765554443434568876532211100 0000 11111122334566676554333222222222222223
Q ss_pred ceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEE
Q 008185 358 MFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFV 437 (574)
Q Consensus 358 ~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~ 437 (574)
++.|.++.+|.++.+.|+......+|.+++..+.+++.+|++.++++..+.++ ++..+. +... ++.+..
T Consensus 228 ~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~-~~~~---------~~~~~~ 296 (393)
T PRK11195 228 VLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GLVVLL-MALQ---------HSLLPA 296 (393)
T ss_pred HHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHH-HHHH---------hHHHHH
Confidence 34466778999999999999999999999999999999888887766655332 222111 1111 111111
Q ss_pred eehhHHHHHHHHhhHHHHHHHHHhhcCCCh-hHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcc
Q 008185 438 LCFAGLAETLAQFKLLPFSMLLARLCPQGC-EGSLTSFSASALCLSSIASGFLGVGLASLTGIT 500 (574)
Q Consensus 438 l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~-~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~ 500 (574)
.....+.....+....|..+.+++..|++. +|++.|+.+..++++..++..+.+.+ +.+|..
T Consensus 297 ~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~ 359 (393)
T PRK11195 297 YPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVP 359 (393)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCC
Confidence 111112222223444566777778766655 79999999999999999999888855 556653
No 48
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.93 E-value=8.9e-23 Score=217.28 Aligned_cols=341 Identities=11% Similarity=0.035 Sum_probs=213.3
Q ss_pred hhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhh---cccCcc
Q 008185 133 PWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLA---LFPVAA 208 (574)
Q Consensus 133 ~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~---~~~~~~ 208 (574)
....++.++ +++|.++.+.++..+.+.+++.+ .|++|+++||+ +||+.+..+..+..++..+.. ....+
T Consensus 32 ~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-----g~k~~l~~~~~~~~~~~~~~~~~~~~~~~- 104 (402)
T TIGR00897 32 EQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-----GPLKTMMIGLLLWCVGHAAFIVFGLGHAN- 104 (402)
T ss_pred HHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-----CcHHHHHHHHHHHHHHHHHHHHHhccCcc-
Confidence 333444565 45899999999999999998766 89999999985 566666666666555544332 21122
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHH-HHHHHHHHHhhccCChhHHHHHHHHHH
Q 008185 209 KALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGG-ILGNLFGGYFLLKTPPTTMFLVFAVLL 287 (574)
Q Consensus 209 ~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~-~igp~igg~l~~~~gwr~~f~i~ai~~ 287 (574)
...+++.|++.++|.+.......+.+.|..++++|++++|+.+.+..+|. ++||++++++.+..||+..+|......
T Consensus 105 --~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 182 (402)
T TIGR00897 105 --YPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFV 182 (402)
T ss_pred --HHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHH
Confidence 45567789988887776655556777888888999999999999988886 689999999988889877777655443
Q ss_pred HHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehcccc
Q 008185 288 SLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCL 366 (574)
Q Consensus 288 ~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 366 (574)
.+..++. ++.++.+.+..+++ +. +.++..+..+..+++|.++...+..++............|.|. +.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~ 252 (402)
T TIGR00897 183 LTGGVIALFSNKDIFTPQHMQT------RE---KFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFV-AEL 252 (402)
T ss_pred HHHHHHHHhccCCCCCcccccC------Cc---chhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHc
Confidence 3333333 34555432211100 00 0111122334567788776654433332222222223345455 458
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHH-HHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHH
Q 008185 367 NINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVG-AVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAE 445 (574)
Q Consensus 367 g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~-~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~ 445 (574)
|+++.+.+.......++.+++..+.+++.||+++|+.+. .+.+...+.... +...... .....+.......+.
T Consensus 253 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~-l~~~~~~----~~~~~~~~~~~~~~~- 326 (402)
T TIGR00897 253 GFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLA-LYYIPQH----FGHSFAVALIIAIAL- 326 (402)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH-HHHHHHc----cCCcHHHHHHHHHHH-
Confidence 999988888877788899999999999999999887653 222222222111 1111000 001111111111111
Q ss_pred HHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 446 TLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 446 ~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
+.+.....|......+.. ++.+|+++|+.+...++|..++|.++|.+.+..|+
T Consensus 327 G~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~ 379 (402)
T TIGR00897 327 GIFLAGYVPLAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGA 379 (402)
T ss_pred HHHHHHHHHHHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 122222344445556654 56899999999999999999999999999997663
No 49
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.92 E-value=7.5e-23 Score=222.73 Aligned_cols=356 Identities=16% Similarity=0.148 Sum_probs=243.1
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhh-hhhhheeeccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMV-AKPLYGILSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~-~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
+....+...++. +...+.+.++.+ +.-|+...+++.....+|.. ++|+.|.++||+ .||++++.+.++.++.
T Consensus 15 lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-----drrrili~~~~~~~~~ 88 (524)
T PF05977_consen 15 LWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRF-----DRRRILILSQLLRALV 88 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----cchHHHHHHHHHHHHH
Confidence 334444555554 555566655554 67799999999999999985 599999999995 6777777777665544
Q ss_pred HHHhhcc-cCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCCh
Q 008185 198 WGPLALF-PVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPP 276 (574)
Q Consensus 198 ~~~~~~~-~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gw 276 (574)
..+++.. ..+..+.+.++++-++.+++.++..+...+++.|+.++++...+.++.....++.-++||.+||.++...|-
T Consensus 89 ~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~ 168 (524)
T PF05977_consen 89 ALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGA 168 (524)
T ss_pred HHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 3333322 122223566777788889999999999999999999999999999999999999999999999999998999
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccc
Q 008185 277 TTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSG 356 (574)
Q Consensus 277 r~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~ 356 (574)
.++|.+.++..++..+..+.+|.+..+.... +++....+++.++- ..++|.+...++..++..........
T Consensus 169 ~~~f~inalsfl~~i~~l~~~~~~~~~~~~~------~e~~~~~l~~G~ry---v~~~~~l~~~l~~~~~~~l~~~a~~a 239 (524)
T PF05977_consen 169 AAAFLINALSFLISILALLRWKPPPPPSSLP------RERFFSALREGLRY---VRSSPPLRSVLLRSFLFNLFASAVWA 239 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccccccc------hhhhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHhhhHHHH
Confidence 9999999877666544444444322111100 11222233333322 23455544443322221111112223
Q ss_pred cceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceE
Q 008185 357 SMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVF 436 (574)
Q Consensus 357 ~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~ 436 (574)
.+|.+..+.+|.++..+|++....++|+++|+.+.+++.+|.+.++++..+.++.+++.+. +.+. ++.+.
T Consensus 240 LlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~-lal~---------~~~~~ 309 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLL-LALS---------PSFWL 309 (524)
T ss_pred hhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHH-Hhcc---------hHHHH
Confidence 4566777889999999999999999999999999999999988888877776665554332 1111 11221
Q ss_pred EeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcc
Q 008185 437 VLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGIT 500 (574)
Q Consensus 437 ~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~ 500 (574)
......+.+........+..+..++..|++.+|+++|++.++...+.++|.++.|.+.+.+|..
T Consensus 310 ~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~ 373 (524)
T PF05977_consen 310 ALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVR 373 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 1111122222222333445677899999999999999999999999999999999999998853
No 50
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.92 E-value=1.5e-23 Score=225.81 Aligned_cols=370 Identities=11% Similarity=0.001 Sum_probs=226.7
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
+|..++.+.+.+....... ......+ ++++ +|+++.+.++..+++.++..+ .++.|+++||+ +||+.+..+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-----g~~~~~~~~ 97 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-----NPRVFLPAG 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-----CCceehHHH
Confidence 4555554555555554432 2222333 5566 599999999999999998766 78899999995 455566667
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
.++..++..+++..+....++..+.+.|++.+++.+.........+.|..++++|+.++++.+.+..+|..++|.+.+.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~ 177 (438)
T TIGR00712 98 LILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLG 177 (438)
T ss_pred HHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHH
Confidence 66666666655544211112445567788877777666566677888999999999999999999999999998877754
Q ss_pred hc-cCChhHHHHHHHHHHHHHHHH-hhhcccccccccccc--hhcch-----hhhhh--hhHHHHHHHHHHHHcchhhHH
Q 008185 271 LL-KTPPTTMFLVFAVLLSLQLAI-SFSAREESLGLAQVS--YQNVA-----SKSIA--QSIKKQFSDLIATIGEESISY 339 (574)
Q Consensus 271 ~~-~~gwr~~f~i~ai~~~~~~~~-~~~lpEt~~~~~~~~--~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~v~~ 339 (574)
.. ..+||+.|++.+++.++..++ .+++||++.....++ +.+.+ .++.. .+.++... ...++++.++.
T Consensus 178 ~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 255 (438)
T TIGR00712 178 MAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFM--QYVLPNKLLWY 255 (438)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHH--HHHccCchHHH
Confidence 44 569999999998888776655 456787654321000 00000 00000 01111111 12467787776
Q ss_pred HHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHH
Q 008185 340 PLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDL 419 (574)
Q Consensus 340 ~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l 419 (574)
..+..++.+...+......|.|.++.+|+++.+.++......++.+++..+.+++.||+++++....+..+........+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 335 (438)
T TIGR00712 256 IAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVI 335 (438)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHH
Confidence 65554443333233334456677777899999999988888888888888888888887543222222211111111111
Q ss_pred HhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHH---HHHHHhhcCCChhHHHHHHHHHHHHhHH-HHHHHHHHHHHH
Q 008185 420 ILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPF---SMLLARLCPQGCEGSLTSFSASALCLSS-IASGFLGVGLAS 495 (574)
Q Consensus 420 ~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~---~~l~~~~~p~~~~gt~~gl~~~~~~lg~-~lg~~i~g~l~~ 495 (574)
.+.... ..+.+. .....+ ..+.....|. .....|.+|++.+|+++|+.++..++|+ .++|.+.|.+.+
T Consensus 336 ~~~~~~-----~~~~~~-~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~ 407 (438)
T TIGR00712 336 VYWMNP-----AGNPLV-DMICMI--VIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD 407 (438)
T ss_pred HHHhcC-----CCchHH-HHHHHH--HHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHH
Confidence 111000 001110 000011 1111111221 2346789999999999999999988874 689999999999
Q ss_pred hhCc
Q 008185 496 LTGI 499 (574)
Q Consensus 496 ~~g~ 499 (574)
..|+
T Consensus 408 ~~g~ 411 (438)
T TIGR00712 408 FFGW 411 (438)
T ss_pred hccc
Confidence 8764
No 51
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.92 E-value=1.1e-23 Score=229.09 Aligned_cols=247 Identities=10% Similarity=-0.085 Sum_probs=155.9
Q ss_pred HHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHH
Q 008185 139 FHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMAC 217 (574)
Q Consensus 139 ~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 217 (574)
+.+.+++|++..+.+++.+.+.+++.+ .++.|+++||+ +||+.+..+.++..++..+.++..+ ...++++
T Consensus 60 ~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-----G~r~~~~~~~~~~~~~~~~~~~~~s----~~~l~~~ 130 (476)
T PLN00028 60 PIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-----GPRYGSAFLLMLTAPAVFCMSLVSS----ATGFIAV 130 (476)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CChHHHHHHHHHHHHHHHHHHHhcC----HHHHHHH
Confidence 366788999999999998888888776 68899999995 4555666666666666665655532 4566778
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhh----c-----cCChhHHHHHHHHHHH
Q 008185 218 VLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFL----L-----KTPPTTMFLVFAVLLS 288 (574)
Q Consensus 218 ~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~----~-----~~gwr~~f~i~ai~~~ 288 (574)
|++.+++.+... .....+.|..++++||.++++.+....+|..+++.+.+.+. + ..|||++|++.+++.+
T Consensus 131 r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l 209 (476)
T PLN00028 131 RFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHI 209 (476)
T ss_pred HHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHH
Confidence 888877766433 34456889999999999999887666666666655554432 2 2589999999998887
Q ss_pred HHHHHhhhccc-ccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccC
Q 008185 289 LQLAISFSARE-ESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLN 367 (574)
Q Consensus 289 ~~~~~~~~lpE-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g 367 (574)
+..++.+++++ ++....+..+++. +..... ..+.+++.+++++++...+..++.+..........+.|+.+.+|
T Consensus 210 ~~~l~~~~~~~~~p~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g 284 (476)
T PLN00028 210 IMGILVLTLGQDLPDGNYRELKKSG--TMPKDS---FSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFG 284 (476)
T ss_pred HHHHHHHHHcCcCCCCchhhHHhcC--cccccc---HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcC
Confidence 77666544443 2221100000000 000000 11234445677777655443333222222222234455667789
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 008185 368 INPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPL 400 (574)
Q Consensus 368 ~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~ 400 (574)
+++...+.......++.+++..+.+++.||+++
T Consensus 285 ~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~ 317 (476)
T PLN00028 285 LSLETAGAIAASFGLMNLFARPAGGYLSDVAAR 317 (476)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 999888887766666666666666666665543
No 52
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.92 E-value=9.5e-23 Score=216.42 Aligned_cols=363 Identities=13% Similarity=0.112 Sum_probs=217.5
Q ss_pred HHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhh-hhhhhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHh
Q 008185 124 YWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGN-LPMVAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPL 201 (574)
Q Consensus 124 ~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~-l~~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~ 201 (574)
.|..++.. +..+.++.++++++|.+++++|++.+... .++.++|++|.++||+ | +||.+++.+.+...+...+.
T Consensus 24 ~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~---g-~r~~~~~~~~~~~~~~~~~~ 99 (393)
T PRK15011 24 AFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKR---G-DRKSLIVFCCLLGVLACTLF 99 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---c-chhHHHHHHHHHHHHHHHHH
Confidence 45555554 55566777889999999999999877654 4677777765559985 3 55655555555444444444
Q ss_pred hcccCccchHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcccCc--cchHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008185 202 ALFPVAAKALPNLMAC-VLLSNLGASITEVAKDALVAEYGQKNGI--VGLQSYAFMAAASGGILGNLFGGYFLLKTPPTT 278 (574)
Q Consensus 202 ~~~~~~~~~~~~l~~~-~~l~~~g~~~~~~~~~a~i~d~~~~~~r--g~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~ 278 (574)
++..+ ++.+++. +++++.+. ...+...++..|..++++| +...++.+++.++|.++||.+++++.+..|||+
T Consensus 100 ~~~~~----~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~ 174 (393)
T PRK15011 100 AWNRN----YFVLLFVGVFLSSFGS-TANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTV 174 (393)
T ss_pred HHhhH----HHHHHHHHHHHHHHHH-hhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHH
Confidence 44322 4444444 44444443 4455566777777655544 233467777888999999999999998899999
Q ss_pred HHHHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhccccccc
Q 008185 279 MFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGS 357 (574)
Q Consensus 279 ~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~ 357 (574)
.|++.++..++..+.. +++||.+....+. + ++ .+..++ +.+..+......++.+.....+...
T Consensus 175 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (393)
T PRK15011 175 MYLSAAVAFIVCGVMVWLFLPSMRKELPLA-T-----GT-LEAPRR---------NRRDTLLLFVICTLMWGTNSLYIIN 238 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhcCccCCCCccc-c-----cc-cccccc---------ccccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988777666554 4678764321110 0 00 000000 0111111111111112211222223
Q ss_pred ceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEE
Q 008185 358 MFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFV 437 (574)
Q Consensus 358 ~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~ 437 (574)
.+.|.++.+|+++.+.|+......++.+++..+.+++.||+++|+.+..+.+...+. +...... .+.+..
T Consensus 239 ~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~-~~~~~~~---------~~~~~~ 308 (393)
T PRK15011 239 MPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCF-YAGMLMA---------HSPAIL 308 (393)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH-HHHHHHH---------hhHHHH
Confidence 455666778999988888776666777888889999999999998776554433322 1111111 011111
Q ss_pred eehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHH
Q 008185 438 LCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLA 517 (574)
Q Consensus 438 l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~ 517 (574)
+....+.....+..........+|..|+ .+|++.++++...++|..+++.++|.+.+.+|+. ..+.++.+.
T Consensus 309 l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~--------~~~~~~~~~ 379 (393)
T PRK15011 309 LGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYH--------AVFWFALVM 379 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH--------HHHHHHHHH
Confidence 1111111111111112223556788875 5999999999999999999999999999976642 334445555
Q ss_pred HHHHHHHHHhcCC
Q 008185 518 ALLPLIWIHNVPM 530 (574)
Q Consensus 518 ~ll~l~~~~~vp~ 530 (574)
.+++++.++++||
T Consensus 380 ~~~~~~~~~~~~~ 392 (393)
T PRK15011 380 IIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHhhcC
Confidence 5566666666665
No 53
>PRK09952 shikimate transporter; Provisional
Probab=99.92 E-value=1.2e-22 Score=218.71 Aligned_cols=392 Identities=11% Similarity=0.062 Sum_probs=228.0
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhc--CCChhHHHHHHHH--hhhh---hhh-hhhheeeccccccCCCcc
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNL--SLHPSTLQLVQNS--GNLP---MVA-KPLYGILSDALYIGGAHR 183 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~--~~s~~~~~l~~s~--~~l~---~~~-~pl~G~lsD~~~~~G~rR 183 (574)
+|.......++.+..+++. +.....+..+.+++ +.++. .++..+. +.++ ..+ +++.|+++||+ +|
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-----Gr 93 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRL-----GR 93 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-----cc
Confidence 4445555666777777765 33333333556555 67776 4554322 2223 333 45679999985 56
Q ss_pred chhHhHHHHHHHHHHHHhhcccCccc----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHH
Q 008185 184 IPYICIGVFLQILSWGPLALFPVAAK----ALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASG 259 (574)
Q Consensus 184 k~~l~i~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G 259 (574)
|+.+.++.++..++..+.+++++... ....++++|++++++.+...+....++.|..|+++|+...+....+..+|
T Consensus 94 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G 173 (438)
T PRK09952 94 KRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVG 173 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 67777788888888887777754210 01146788999999988877777788999999999999999888888899
Q ss_pred HHHHHHHHHHhh--------ccCChhHHHHHHHHHHHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHH
Q 008185 260 GILGNLFGGYFL--------LKTPPTTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIAT 331 (574)
Q Consensus 260 ~~igp~igg~l~--------~~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (574)
.++++.+++.+. +.+|||++|++.++..++...+...+||+++......+.+ +.++ ........
T Consensus 174 ~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~----~~~~----~~~~~~~l 245 (438)
T PRK09952 174 LLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQA----AAKK----RIPVIEAL 245 (438)
T ss_pred HHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcc----cccc----cCCHHHHH
Confidence 998887776654 2579999999987765443332345778754321110000 0000 00001112
Q ss_pred HcchhhHHHHHHH-HhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Q 008185 332 IGEESISYPLTWL-VASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQIL 410 (574)
Q Consensus 332 ~~~~~v~~~~l~~-~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll 410 (574)
+++|+.+...... +......+......+.|..+.+|++............+..+++..+.+++.||+++|+.+..+.++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~ 325 (438)
T PRK09952 246 LRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALI 325 (438)
T ss_pred HHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 3455544433211 111111222222334466677888877655554455566677778889999999999887766554
Q ss_pred HHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHH-HhhHHHHHHHHHhhcCCChhHHHHHHHHHHH-HhHHHHHHH
Q 008185 411 YASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLA-QFKLLPFSMLLARLCPQGCEGSLTSFSASAL-CLSSIASGF 488 (574)
Q Consensus 411 ~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~-~lg~~lg~~ 488 (574)
..++.+.. ..... ..+....+....+...++ +....+...+..|.+|.+.|+++.|+.+.+. .+|+.++|.
T Consensus 326 ~~~~~~~~-~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~ 398 (438)
T PRK09952 326 GTLSAFPF-FMALE------AQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPF 398 (438)
T ss_pred HHHHHHHH-HHHHH------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHH
Confidence 43322211 11100 001111111111111112 2222334567889999999999999976665 488899999
Q ss_pred HHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHHHHHHhcCCC
Q 008185 489 LGVGLASLTGITFGDYSSLPVGIVIQFLAALLPLIWIHNVPMS 531 (574)
Q Consensus 489 i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l~~~~~vp~~ 531 (574)
+.+.+.+..+. ++. ..+.+.++..+++++....++++
T Consensus 399 i~g~l~~~~~~---~~~---~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 399 IAAALVTYFGG---SWH---SVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHhcCC---Cch---HHHHHHHHHHHHHHHHHHHcccc
Confidence 99998875431 122 22333444444444444556653
No 54
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.92 E-value=3.2e-24 Score=224.39 Aligned_cols=345 Identities=15% Similarity=0.015 Sum_probs=225.7
Q ss_pred HHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHH
Q 008185 140 HMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACV 218 (574)
Q Consensus 140 ~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 218 (574)
++.+++|.+..+.+++.+++.++..+ .++.|+++||+ +||+.+.++.++..++..+.+...+ ++.+++.|
T Consensus 20 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 90 (379)
T TIGR00881 20 YLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-----NPRVFLPIGLILCAIVNLFFGFSTS----LWVMAALW 90 (379)
T ss_pred HHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-----CCeehhHHHHHHHHHHHHHHHHhhh----HHHHHHHH
Confidence 56778999999999999999998766 78899999985 5667777787777777776666642 56678889
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHH-HHHHHhhccCChhHHHHHHHHHHHHHHHHh-hh
Q 008185 219 LLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGN-LFGGYFLLKTPPTTMFLVFAVLLSLQLAIS-FS 296 (574)
Q Consensus 219 ~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp-~igg~l~~~~gwr~~f~i~ai~~~~~~~~~-~~ 296 (574)
++.+++.+...+...+++.|..++++|+.++++...+..+|.+++| ++++.+.+..+||+.|++.+++.++..++. ++
T Consensus 91 ~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (379)
T TIGR00881 91 ALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLL 170 (379)
T ss_pred HHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhee
Confidence 9998888887777888999999999999999999999999999999 577777778899999999888777665554 45
Q ss_pred cccccccccccchhc----c-h--hhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCC
Q 008185 297 AREESLGLAQVSYQN----V-A--SKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNIN 369 (574)
Q Consensus 297 lpEt~~~~~~~~~~~----~-~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s 369 (574)
.||++........++ . + ++...+..+......+..+++|.++...+..++.+..........+.|..+.+|++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 250 (379)
T TIGR00881 171 LRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFS 250 (379)
T ss_pred eCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 676543221100000 0 0 00000000001112334567777766555444323222223333455667788999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhcCCc-hhHHHH-HHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHH
Q 008185 370 PSVIGMSRVIGQSMLLSLTVFYDRYWKKVPL-RKLVGA-VQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETL 447 (574)
Q Consensus 370 ~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~-r~ll~~-~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~ 447 (574)
+.+.++......++.+++..+.+++.+|... |+.... .........+...... ...+.+.......+....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~ 323 (379)
T TIGR00881 251 KEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLN-------PAANPLMDLICLFALGFL 323 (379)
T ss_pred HHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcC-------cchhHHHHHHHHHHHHHH
Confidence 9999998888888888888888888887532 322221 1111111111110000 001111111111111111
Q ss_pred HHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcc
Q 008185 448 AQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGIT 500 (574)
Q Consensus 448 ~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~ 500 (574)
..........+.+|..|++.||+++|+.+...++|..++|.+.|.+.+..|+.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 376 (379)
T TIGR00881 324 VYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWA 376 (379)
T ss_pred HhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccc
Confidence 11111222356789999999999999999999999999999999999988754
No 55
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.92 E-value=6.6e-23 Score=216.78 Aligned_cols=345 Identities=12% Similarity=0.021 Sum_probs=217.5
Q ss_pred HHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhh-hhhhheeeccccccCCCccchhHhHHHHHHHHHH
Q 008185 121 GLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMV-AKPLYGILSDALYIGGAHRIPYICIGVFLQILSW 198 (574)
Q Consensus 121 ~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~-~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~ 198 (574)
.+.++...+.. +..+.++.+++ ++|+|..++|++.+++.+... .+|++|+++||. | ||+....+......+..
T Consensus 10 ~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~---~-~~~~~~~~~~~~~~l~~ 84 (382)
T TIGR00902 10 ALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA---N-HIIIALRLLALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C-cHHHHHHHHHHHHHHHH
Confidence 34444444433 44444555654 589999999999999888654 489999999985 2 32211111111111111
Q ss_pred HHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008185 199 GPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTT 278 (574)
Q Consensus 199 ~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~ 278 (574)
..+....+ +++.+++.|.+.+.+.+...+..+++..|. +++|+.+++......++|.++||.++|++.+..|||+
T Consensus 85 ~~~~~~~~---~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~ 159 (382)
T TIGR00902 85 AAFSAGAH---NAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQN 159 (382)
T ss_pred HHHHHhhh---hHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhH
Confidence 11222222 256677778876666655555667776554 4678888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccc
Q 008185 279 MFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSM 358 (574)
Q Consensus 279 ~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~ 358 (574)
.|++.++..+ ..+..+.++|+..+..+ +++ +. .+..++.++.+++|+++...+..++.......+....
T Consensus 160 ~f~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~----~~-----~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~ 228 (382)
T TIGR00902 160 ILAILTAGLA-FMLIGFLIKPTIPPKDA-IPE----DE-----SQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFS 228 (382)
T ss_pred HHHHHHHHHH-HHHHHHHcCCCCCCCcc-ccc----cc-----cccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998765532 22223334443211111 000 00 0011233456788888776655544233222223333
Q ss_pred eeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEe
Q 008185 359 FCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVL 438 (574)
Q Consensus 359 ~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l 438 (574)
+.|.++ +|.++.+.|+......++.+++..+.+++.||++.|+++.++.++..+..... ... ++.+..+
T Consensus 229 ~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~-~~~---------~~~~~~~ 297 (382)
T TIGR00902 229 AIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAII-GAI---------EAFPLIF 297 (382)
T ss_pred HHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHH-HhH---------hhHHHHH
Confidence 445554 89999999999888999999999999999999999999887776665443221 111 1112112
Q ss_pred ehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHH-HHHhHHHHHHHHHHHHHHhhC
Q 008185 439 CFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSAS-ALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 439 ~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~-~~~lg~~lg~~i~g~l~~~~g 498 (574)
....+..........+.+.++.+. |++.++++++++++ ...+|..+|+.++|.+.+.+|
T Consensus 298 ~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g 357 (382)
T TIGR00902 298 LLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG 357 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 222232222234444456677777 99999999999875 457899999999999999876
No 56
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.92 E-value=2.5e-24 Score=223.21 Aligned_cols=344 Identities=19% Similarity=0.161 Sum_probs=226.9
Q ss_pred HHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHH
Q 008185 123 GYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGP 200 (574)
Q Consensus 123 ~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~ 200 (574)
.++...+.. +.....+.++.+++|.+..+.+++.+++.++..+ .|++|+++||+ +||+.+.++.++..++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~l~~~~~~~~~~~~~ 78 (352)
T PF07690_consen 4 AFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-----GRRRVLIIGLLLFALGSLL 78 (352)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCeeeEeehhhhhhhHHHH
Confidence 344444443 3444444367888999999999999999887655 88999999985 4666777787777777444
Q ss_pred hhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 008185 201 LALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMF 280 (574)
Q Consensus 201 ~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f 280 (574)
..+. ++ .+.+++.|++.+++.+...+...+++.|..++++|++++++...+..+|.++||.+++++.+..+||+.|
T Consensus 79 ~~~~-~~---~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~ 154 (352)
T PF07690_consen 79 LAFA-SN---FWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAF 154 (352)
T ss_dssp HHHH-CC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHH
T ss_pred hhhh-hh---HHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccccccc
Confidence 4433 22 4467888999999999988889999999999999999999999999999999999999999889999999
Q ss_pred HHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHH-HHHHHcchhhHHHHHHHHhHhhhcccccccc
Q 008185 281 LVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSD-LIATIGEESISYPLTWLVASVAMVPVLSGSM 358 (574)
Q Consensus 281 ~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~ 358 (574)
++.+++.++..++. ++++|++.+..+.++++. + +..++..++ .+...++|.++......++............
T Consensus 155 ~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (352)
T PF07690_consen 155 LISAILSLIAAILFILFLPEPPPPRERESPKES--E---SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFL 229 (352)
T ss_dssp HHHHHHHHHHHHHHHCCC---STTTT--SSTTT--T-----HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhhhhhHhhhhhhccccccccccccc--c---cccccccccccccccccchhhhhhhhhhHHHHHHHHhhccc
Confidence 99999888877653 455554433221111100 0 001111112 2333455555422222222111222233334
Q ss_pred eeehccccCCC-chhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEE
Q 008185 359 FCYQTQCLNIN-PSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFV 437 (574)
Q Consensus 359 ~~~~~~~~g~s-~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~ 437 (574)
+.|..+.+|++ ..+.+.......++.+++..+.+++.+|+++++..........+..+........ .+....
T Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 302 (352)
T PF07690_consen 230 PLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFS-------SSPVWL 302 (352)
T ss_dssp HHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHH-------CHHHHH
T ss_pred chhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh-------hhHHHH
Confidence 44567789999 7888888888888888888899999999988766655544443333221111110 011111
Q ss_pred eehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHH
Q 008185 438 LCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASG 487 (574)
Q Consensus 438 l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~ 487 (574)
+....+.....+........++.+..|++.+|+++|+.++..++|..+||
T Consensus 303 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 303 IIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 11222222222333444567889999999999999999999999998886
No 57
>PRK11462 putative transporter; Provisional
Probab=99.92 E-value=2.4e-22 Score=217.56 Aligned_cols=384 Identities=15% Similarity=0.071 Sum_probs=239.1
Q ss_pred hhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccch-
Q 008185 133 PWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKA- 210 (574)
Q Consensus 133 ~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~- 210 (574)
....+.+++.+.+|+++..+|++..+..+-.++ +|+.|.++||.+.+.+|||||++++.+...+++.++...++....
T Consensus 28 ~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~ 107 (460)
T PRK11462 28 VMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNG 107 (460)
T ss_pred HHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcch
Confidence 334455678899999999999999988876655 999999999998886799999999988888887766655532111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cCccchHHHHHHHHHHHHHHHHHHHHHhhcc-------CChhHHHH
Q 008185 211 -LPNLMACVLLSNLGASITEVAKDALVAEYGQK-NGIVGLQSYAFMAAASGGILGNLFGGYFLLK-------TPPTTMFL 281 (574)
Q Consensus 211 -~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~-~~rg~~~s~~~~~~~~G~~igp~igg~l~~~-------~gwr~~f~ 281 (574)
..++.+..++..++.+..+++..++.+|++++ +||+++.++...+..+|..+++.+...+.+. .||+....
T Consensus 108 ~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~ 187 (460)
T PRK11462 108 KMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIA 187 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHH
Confidence 22344445556778888899999999999975 8999999988888888888887776554432 36888888
Q ss_pred HHHHHHHHHHHHhh-hcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhccccccccee
Q 008185 282 VFAVLLSLQLAISF-SAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFC 360 (574)
Q Consensus 282 i~ai~~~~~~~~~~-~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~ 360 (574)
+.+++..++.++.+ ..||+.....+ +.+.++ .++..++||.+...+...++.+...........|
T Consensus 188 i~~ii~~i~~~i~~~~~kE~~~~~~~-----------~~~~~~---~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y 253 (460)
T PRK11462 188 VLSVVAFMMLAFCFFTTKERVEAPPT-----------TTSMRE---DLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMY 253 (460)
T ss_pred HHHHHHHHHHHHHHhcceeccCCCcc-----------CCCHHH---HHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhh
Confidence 88777666655544 46775422110 011232 2334467776655443332322222222333445
Q ss_pred ehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeeh
Q 008185 361 YQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCF 440 (574)
Q Consensus 361 ~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~ 440 (574)
|.+...|. +...+.......++.+++..+.+++.+|+++|+++..+.++..+..+.. .+... .+.+.....
T Consensus 254 ~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~ 324 (460)
T PRK11462 254 YVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAM-FFVPM-------QASITMFVF 324 (460)
T ss_pred hhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH-HHhch-------hHHHHHHHH
Confidence 55555553 3344555566677888888889999999998887654443333222221 11110 011000111
Q ss_pred hHHHHHHHHhhHHHHHHHHHhhcC-------CChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCC-CC---hh-
Q 008185 441 AGLAETLAQFKLLPFSMLLARLCP-------QGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDY-SS---LP- 508 (574)
Q Consensus 441 ~~l~~~~~~~~~~p~~~l~~~~~p-------~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~-~~---l~- 508 (574)
..+..............+++|..+ ++.+|..++..+...++|.++++.++|.+.+..|+..+.- ++ ..
T Consensus 325 ~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy~~~~~~q~~~~~~~ 404 (460)
T PRK11462 325 IFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDAAEKAQNSATISI 404 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 111111111111111344455443 6778999999999999999999999999999888864211 11 11
Q ss_pred ---HHHHHHHHHHHHHHHHH-HhcCCCHHHHHHHH
Q 008185 509 ---VGIVIQFLAALLPLIWI-HNVPMSETIIEKGR 539 (574)
Q Consensus 509 ---~~~li~~~~~ll~l~~~-~~vp~~~~~~~~~~ 539 (574)
....+.+++.+++++.+ .+.|-+|++.+|.+
T Consensus 405 i~~~~~~~P~~~~~~~~~~~~~~y~l~~~~~~~i~ 439 (460)
T PRK11462 405 IIALFTIVPAICYLLSAIIAKRYYSLTTHNLKTVM 439 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHH
Confidence 22234444445555554 46788888776643
No 58
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.92 E-value=7.4e-23 Score=224.29 Aligned_cols=414 Identities=13% Similarity=0.061 Sum_probs=241.5
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHh-----cCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccch
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHN-----LSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIP 185 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~-----~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~ 185 (574)
.+....++.++.+..+++. ......+ .+..+ .+.+..+.+++.+.+.++..+ .+++|+++||+ +||+
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-----Grr~ 87 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTK-MLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-----GRKR 87 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----ccHH
Confidence 3445555677778888876 4343333 33332 234566778888888888766 77899999985 5777
Q ss_pred hHhHHHHHHHHHHHHhhcccCccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHH
Q 008185 186 YICIGVFLQILSWGPLALFPVAAK--ALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILG 263 (574)
Q Consensus 186 ~l~i~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~ig 263 (574)
.+.++.++..++..+.+...+... .+..++++|++.+++.+...+....++.|.+|+++||.++++.+....+|.++|
T Consensus 88 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g 167 (502)
T TIGR00887 88 VYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAG 167 (502)
T ss_pred HHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHH
Confidence 776677766666665555433111 145678899999999998888888999999999999999999999999999999
Q ss_pred HHHHHHhhc-----------------------cCChhHHHHHHHHHHHHHHHHhhhcccccccccccchh-cch-----h
Q 008185 264 NLFGGYFLL-----------------------KTPPTTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQ-NVA-----S 314 (574)
Q Consensus 264 p~igg~l~~-----------------------~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~-~~~-----~ 314 (574)
+.++.++.. ..+||++|.+.++..++..+..+++||++++...++++ +.+ +
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~ 247 (502)
T TIGR00887 168 AIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSA 247 (502)
T ss_pred HHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHH
Confidence 988876532 24799999888776665555567899998864321111 000 0
Q ss_pred ------hhhhhh---H---HH-HHHHHHHHHcc---hhhHHHHHHHHhHhh----hcccccccceeehccccCCCchhHH
Q 008185 315 ------KSIAQS---I---KK-QFSDLIATIGE---ESISYPLTWLVASVA----MVPVLSGSMFCYQTQCLNINPSVIG 374 (574)
Q Consensus 315 ------~~~~~~---~---~~-~~~~~~~~~~~---~~v~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~g~s~~~~g 374 (574)
+...+. . ++ ....+++++++ ++..+..+...+.+. ..+......|.++ +..|+++...+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~-~~~G~~~~~~~ 326 (502)
T TIGR00887 248 VLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVIL-SAIGYSPPAAT 326 (502)
T ss_pred HhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHH-HHHcCCCCccc
Confidence 000000 0 00 00122333321 222121111111011 1111111123333 24666543211
Q ss_pred -----------H-HHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhH
Q 008185 375 -----------M-SRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAG 442 (574)
Q Consensus 375 -----------l-~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~ 442 (574)
. ..+...++.+++..+.+++.+|+++|++++.+.++.+++.++......... .... +....
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~-----~~~~--~~~~~ 399 (502)
T TIGR00887 327 NNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLS-----THGF--LAIYV 399 (502)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcc-----hhHH--HHHHH
Confidence 1 123344566667778888999999999887776655544332221111000 0000 01111
Q ss_pred HHHHHHHhhHHH-HHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCC--ChhHHHHHHHHHHH
Q 008185 443 LAETLAQFKLLP-FSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYS--SLPVGIVIQFLAAL 519 (574)
Q Consensus 443 l~~~~~~~~~~p-~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~--~l~~~~li~~~~~l 519 (574)
+..........+ ...+.+|..|.+.||+++|+.+.+..+++.+++.+.+.+.+.-+.+.+.+. .....+.+.++..+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 479 (502)
T TIGR00887 400 LAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMF 479 (502)
T ss_pred HHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHH
Confidence 111111122222 235578999999999999999999999999999999988774321110000 11222333333334
Q ss_pred HHHHHHHhcCCCHHHHHHHHh
Q 008185 520 LPLIWIHNVPMSETIIEKGRK 540 (574)
Q Consensus 520 l~l~~~~~vp~~~~~~~~~~~ 540 (574)
++.++.+++||++++++||..
T Consensus 480 ~~~i~~~~lpEt~~~~leei~ 500 (502)
T TIGR00887 480 LGILFTLLIPETKGKSLEELS 500 (502)
T ss_pred HHHHHheEeccCCCCCHHhhh
Confidence 444455788999998887754
No 59
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.92 E-value=1.6e-22 Score=214.53 Aligned_cols=324 Identities=18% Similarity=0.120 Sum_probs=212.8
Q ss_pred HHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHH
Q 008185 140 HMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACV 218 (574)
Q Consensus 140 ~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 218 (574)
.+.+++|.|+.+.++..+.+.+++.+ .|++|+++||+ +||+.+.++.++..++.......++ +..+++.|
T Consensus 33 ~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-----grr~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~ 103 (394)
T PRK11652 33 DMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-----GRRPVILVGMSIFILGTLVALFAHS----LTVLIAAS 103 (394)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-----CChHHHHHHHHHHHHHHHHHHHHcc----HHHHHHHH
Confidence 45677999999999999999998876 78899999985 5666776677766666665555432 56678889
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHH-hhhc
Q 008185 219 LLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAI-SFSA 297 (574)
Q Consensus 219 ~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~-~~~l 297 (574)
++.+++.+...+....+..|..++++++.++++...+..+|..+||.+++++.+..|||+.|++.++..++..++ .+++
T Consensus 104 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 183 (394)
T PRK11652 104 AIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWM 183 (394)
T ss_pred HHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhC
Confidence 998888777766777788898888889999999889999999999999999998889999999988777665554 3567
Q ss_pred ccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHH
Q 008185 298 REESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSR 377 (574)
Q Consensus 298 pEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~ 377 (574)
||++....+ + ++.+ +..+..+++|.++...+..+........+....+.+..+.+|+++.+.|+..
T Consensus 184 ~~~~~~~~~--------~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 249 (394)
T PRK11652 184 PETRPADAR--------R---TRVL---ASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILF 249 (394)
T ss_pred CccCccccc--------h---hHHH---HHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHH
Confidence 886432110 0 1111 2333446677665544433332211111222234456677999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHH-HH
Q 008185 378 VIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLP-FS 456 (574)
Q Consensus 378 i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p-~~ 456 (574)
....++.+++..+.+++.+|++++... .........+...... .. ...+.+.... ..+..+++.....| ..
T Consensus 250 ~~~~~~~~~g~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~-~~~~~~~g~~~~~~~~~ 321 (394)
T PRK11652 250 ILPIPAAFFGAWFAGRPNKRFSTLMWQ--SVICCLLAGLLMWIPG--WF---GVMNVWTLLV-PAALFFFGAGMLFPLAT 321 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH--Hh---ccccHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 888899999999999999887632222 2111111111111110 00 0011111111 11222222222333 34
Q ss_pred HHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 008185 457 MLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLAS 495 (574)
Q Consensus 457 ~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~ 495 (574)
.+..+..| +.+|++.++.+...++|..+++.+++.+.+
T Consensus 322 ~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 322 SGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 55667776 578999999999999999988888776543
No 60
>PRK12382 putative transporter; Provisional
Probab=99.92 E-value=2.7e-22 Score=212.63 Aligned_cols=329 Identities=16% Similarity=0.083 Sum_probs=207.7
Q ss_pred chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHH---HhhcccC-
Q 008185 132 FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWG---PLALFPV- 206 (574)
Q Consensus 132 ~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~---~~~~~~~- 206 (574)
+..+.++.++++++|.|+.+.|++.+.+.+++.+ +|++|+++||+ +||+.+.++.+...++.. ..+..+.
T Consensus 33 ~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-----g~r~~l~~~~~~~~~~~~~~~~~~~~~~~ 107 (392)
T PRK12382 33 LPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-----GAKRSALQGMLACGLAGLAYLLAAILPVS 107 (392)
T ss_pred HHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-----cchHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 4445566678888999999999999999998766 99999999995 455566656555444332 2222211
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHH
Q 008185 207 AAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVL 286 (574)
Q Consensus 207 ~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~ 286 (574)
...++..+++.|++++++.+...+...+.+.|..++++|++++++...+..+|.++||.+++++.+..|||+.+++.++.
T Consensus 108 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~ 187 (392)
T PRK12382 108 APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVL 187 (392)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 11235667888999999988777777788899999999999999999888899999999999999889999988876554
Q ss_pred HHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehcccc
Q 008185 287 LSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCL 366 (574)
Q Consensus 287 ~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 366 (574)
.++........||++.+. ++ + .+.++..+.. ..+.+... ++.+ .+.. .....+.|+.+ .
T Consensus 188 ~~~~~~~~~~~~~~~~~~---~~-----~---~~~~~~~~~~----~~~~~~~~-l~~~-~~~~---~~~~~~~~~~~-~ 246 (392)
T PRK12382 188 PLLAWAFNGTVRKVPAHA---GE-----R---PSLWSVVGLI----WKPGLGLA-LQGV-GFAV---IGTFVSLYFAS-K 246 (392)
T ss_pred HHHHHHHHHhccCCCCCc---cc-----C---chHHHHHHHH----HHhHHHHH-HHHH-HHhH---HHHHHHHHHHh-c
Confidence 433322222334432111 00 0 1112222211 11221111 1111 0111 11111223332 4
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHH
Q 008185 367 NINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAET 446 (574)
Q Consensus 367 g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~ 446 (574)
|++. .++......++.+++..+.+++.+|+++|+.+..+..+..+..+. .... ++.+..+.. .+..+
T Consensus 247 ~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~-~~l~g 313 (392)
T PRK12382 247 GWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLL-LWLA---------PTAWVALAG-AALTG 313 (392)
T ss_pred CCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHH-HHHc---------ccHHHHHHH-HHHHH
Confidence 5543 455555566777888888999999999988877766555443322 1111 111111111 11112
Q ss_pred HHHhhHHH-HHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 447 LAQFKLLP-FSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 447 ~~~~~~~p-~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
++.....| ..+...+.+|++.+|+++|++++..++|..++|.+.|.+.+..|+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~ 367 (392)
T PRK12382 314 AGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGY 367 (392)
T ss_pred HHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 22222233 345678889999999999999999999999999999999998774
No 61
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.92 E-value=1.7e-22 Score=212.54 Aligned_cols=260 Identities=17% Similarity=0.183 Sum_probs=193.1
Q ss_pred hhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHH
Q 008185 135 LALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPN 213 (574)
Q Consensus 135 ~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 213 (574)
+..+ .+.+++|+++.+.++..+++.++..+ .|++|+++||+ +||+++..+.++..++...+...++ ++.
T Consensus 12 p~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~~~~~~~~~~~~~i~~~~~~~~~~----~~~ 81 (377)
T PRK11102 12 PALP-VIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-----GRKPVILGGTLVFALAAVACALAQT----IDQ 81 (377)
T ss_pred ccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-----CChHHHHHHHHHHHHHHHHHHHHcc----HHH
Confidence 3444 44566999999999999999988766 78899999985 5777777777777777776665532 566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHH
Q 008185 214 LMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAI 293 (574)
Q Consensus 214 l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~ 293 (574)
++++|++.+++.+...+...+++.|..++++|++++++.+....+|..+||.+++.+.+..+||+.|++.+++..+..+.
T Consensus 82 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (377)
T PRK11102 82 LIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAAL 161 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHH
Confidence 77889999998888888888999999999999999999999999999999999999999899999999988877766555
Q ss_pred h-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchh
Q 008185 294 S-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSV 372 (574)
Q Consensus 294 ~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~ 372 (574)
. +++||++....+.+ .+.++..++.++.+++|.++...+..++.+.....+....++++.+.+|+++.+
T Consensus 162 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~ 231 (377)
T PRK11102 162 VFFFIPETLPKERRQP----------FHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQN 231 (377)
T ss_pred HHHhCCccCcccccCC----------CChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHH
Confidence 4 56787643221100 011222334445577777665544433322222222233344566778999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Q 008185 373 IGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASS 414 (574)
Q Consensus 373 ~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~ 414 (574)
.|+......++.+++..+.+++.||+++|+.+..+.++..+.
T Consensus 232 ~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~ 273 (377)
T PRK11102 232 FGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIM 273 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887776554333
No 62
>TIGR00895 2A0115 benzoate transport.
Probab=99.91 E-value=5e-23 Score=216.99 Aligned_cols=360 Identities=15% Similarity=0.084 Sum_probs=228.2
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
+|..+....+.++..++.. ......+ .+.+++|.++.+.+++.++..++..+ .++.|+++||+ +||+.+..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~~~~~~~~ 88 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAP-AISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-----GRKRVLLWS 88 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHH-HHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-----hhHHHHHHH
Confidence 4555555555666665544 2333333 55677999999999999998888766 78899999985 567777777
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
.++..++..+.....+ ++.+++.+++.+++.+...+...+++.|..++++|+.++++...+..+|..+||.+++++
T Consensus 89 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 164 (398)
T TIGR00895 89 ILLFSVFTLLCALATN----VTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL 164 (398)
T ss_pred HHHHHHHHHHHHHccc----hHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH
Confidence 7776776666655532 456778899988888888888889999999999999999999999999999999999999
Q ss_pred hccCChhHHHHHHHHHHHHHHHH-hhhcccccccccccchhcc----hh------------hhhhhhHHHHHHHHHHHHc
Q 008185 271 LLKTPPTTMFLVFAVLLSLQLAI-SFSAREESLGLAQVSYQNV----AS------------KSIAQSIKKQFSDLIATIG 333 (574)
Q Consensus 271 ~~~~gwr~~f~i~ai~~~~~~~~-~~~lpEt~~~~~~~~~~~~----~~------------~~~~~~~~~~~~~~~~~~~ 333 (574)
.+..|||+.|++.+++..+..++ .+++||++....+++.++. ++ .......++..++.++.++
T Consensus 165 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (398)
T TIGR00895 165 IPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALF 244 (398)
T ss_pred hhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHh
Confidence 99999999999987666655554 3567876532211100000 00 0000000001111112111
Q ss_pred ch----hhHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHH
Q 008185 334 EE----SISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQI 409 (574)
Q Consensus 334 ~~----~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~l 409 (574)
++ ..+...+..++............+ ++.+.+|+++.+.++......++.+++..+.+++.+|+++|++.... .
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~ 322 (398)
T TIGR00895 245 QGKTARITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLL-L 322 (398)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH-H
Confidence 11 111111111111111111112223 34456899998999988888899999999999999999988444333 2
Q ss_pred HHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHH
Q 008185 410 LYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFL 489 (574)
Q Consensus 410 l~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i 489 (574)
+..+...+..... .+.........+..............++++.+|++.+|+++|+.+++.++|..+||.+
T Consensus 323 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~ 393 (398)
T TIGR00895 323 LGAVFAVLVGSTL---------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPIL 393 (398)
T ss_pred HHHHHHHHHHHHh---------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2222222111100 1111111111222222223333346778999999999999999999999999999999
Q ss_pred HHHH
Q 008185 490 GVGL 493 (574)
Q Consensus 490 ~g~l 493 (574)
+|.+
T Consensus 394 ~G~l 397 (398)
T TIGR00895 394 AGYL 397 (398)
T ss_pred HHhc
Confidence 8865
No 63
>PRK03699 putative transporter; Provisional
Probab=99.91 E-value=3.1e-22 Score=212.52 Aligned_cols=350 Identities=9% Similarity=0.005 Sum_probs=222.8
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
||...+.+++.++..+... ......+ .+++++|+|.++.++..+.+.+++.+ .++.|+++||+ +||+.+..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-----g~r~~~~~~ 78 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGMVMG-PIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-----PLKRQLIFG 78 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hHHHHHHHH
Confidence 4445555666666665543 3333344 46778999999999999999888876 77899999985 566666667
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
.++..++..+.+..++ +..++++|++.+++.+.......+.+.|..++++|+.+++..+....+|..++|.+.+++
T Consensus 79 ~~~~~i~~~l~~~~~~----~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 154 (394)
T PRK03699 79 FALMILAVAGLMFSHS----LALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL 154 (394)
T ss_pred HHHHHHHHHHHHHcch----HHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666665532 566788899988887776666678889999888899998888788888999999998887
Q ss_pred hc-cCChhHHHHHHHHHHHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhh
Q 008185 271 LL-KTPPTTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVA 349 (574)
Q Consensus 271 ~~-~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~ 349 (574)
.. ..|||+.|++.+++.++..++.++.+ .+....+.+++ ..+.. +. ..++.++...+..++...
T Consensus 155 ~~~~~gw~~~f~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~------~~~~~----~~----~~~~~~~~~~~~~~~~~~ 219 (394)
T PRK03699 155 LARSIEWYWVYACIGLVYVAIFILTLFSE-FPALGKHAPKA------DKPVA----KE----KWGIGVLFLAIAALLYIL 219 (394)
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHhcC-CccccccCccc------cCccc----cc----cCChHHHHHHHHHHHHHH
Confidence 64 57999999998877766554443321 11111000000 00000 00 112333333322222111
Q ss_pred hcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhccc
Q 008185 350 MVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQF 429 (574)
Q Consensus 350 ~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~ 429 (574)
.........|.|..+.+|+++.+.+.......++.+++..+.+++.||+++|+.+....++..+.... +...
T Consensus 220 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~-~~~~------- 291 (394)
T PRK03699 220 AQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYL-FVNT------- 291 (394)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH-HHHc-------
Confidence 11122233455677789999999999888888888889999999999999998877655444332211 1110
Q ss_pred CcCcceEEeehhHHHHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 430 GVPNEVFVLCFAGLAETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 430 ~~~~~~~~l~~~~l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
++.........+. ++......|. .....+..|+ .+++..|......++|..++|.+.|.+.+..|+
T Consensus 292 --~~~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~ 358 (394)
T PRK03699 292 --DDPSHLLYAILGL-GFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGL 358 (394)
T ss_pred --CCchHHHHHHHHH-HHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCc
Confidence 1111111111111 1211122222 3345565554 457778888888999999999999999998775
No 64
>TIGR00898 2A0119 cation transport protein.
Probab=99.91 E-value=6.2e-23 Score=224.89 Aligned_cols=362 Identities=17% Similarity=0.070 Sum_probs=228.8
Q ss_pred HHHHhcCCC---hhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHH
Q 008185 140 HMAHNLSLH---PSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLM 215 (574)
Q Consensus 140 ~l~~~~~~s---~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 215 (574)
.+.+|++++ ..+.++..+++.+++.+ .+++|+++||+ +||+.++++.++..++.++.++.++ ++.++
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-----Grr~~~~~~~~~~~i~~~~~~~~~~----~~~~~ 184 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-----GRKKVLLLSTLVTAVSGVLTAFSPN----YTVFL 184 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-----cchHHHHHHHHHHHHHHHHHHHccc----HHHHH
Confidence 456789998 89999999999999877 77899999985 5667777777777777776666543 67788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHhh
Q 008185 216 ACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAISF 295 (574)
Q Consensus 216 ~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~~ 295 (574)
++|++.+++.+...+...+++.|..++++|+.+.++...+..+|.+++|.+++.+. +||+.|++.++..++..+..+
T Consensus 185 ~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---~wr~~~~~~~i~~~~~~~~~~ 261 (505)
T TIGR00898 185 VFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP---DWRWLQLAVSLPTFLFFLLSW 261 (505)
T ss_pred HHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988877788899999999999999999988888999999999987664 399999999888776666667
Q ss_pred hcccccccccccchhcchhh---------------hh-hhhHHHH---H---HHHHHHHcchhhHHHHHHHHhHhhhccc
Q 008185 296 SAREESLGLAQVSYQNVASK---------------SI-AQSIKKQ---F---SDLIATIGEESISYPLTWLVASVAMVPV 353 (574)
Q Consensus 296 ~lpEt~~~~~~~~~~~~~~~---------------~~-~~~~~~~---~---~~~~~~~~~~~v~~~~l~~~l~~~~~~~ 353 (574)
++||++++...+++.+.+++ .. ....++. . ...+.++++|.++...+...+.+.....
T Consensus 262 ~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 341 (505)
T TIGR00898 262 FVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAF 341 (505)
T ss_pred hcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 89998765321111100000 00 0000000 0 1334567777766554433332222111
Q ss_pred ccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCc
Q 008185 354 LSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPN 433 (574)
Q Consensus 354 ~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~ 433 (574)
.......+ ...++.+.. ...+..++..+++..+.+++.+|+++|+.+.++.++.+++.+... .... ..
T Consensus 342 ~~~~~~~~-~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~-~~~~-------~~ 409 (505)
T TIGR00898 342 SYYGLVLD-LGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLL-FVPV-------DL 409 (505)
T ss_pred HHHHHhcc-ccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-HcCC-------Cc
Confidence 11111112 223444422 233344556667777778888999999888777666555433221 1110 00
Q ss_pred ceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHH
Q 008185 434 EVFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVI 513 (574)
Q Consensus 434 ~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li 513 (574)
.+.......+..+.....+.....+.+|.+|++.|++++|+.+++..+|+.++|.+.+ +.+. +. ...+.+
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~-~~--------~~~~~~ 479 (505)
T TIGR00898 410 YFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK-WL--------FLPLVL 479 (505)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH-HH--------hhHHHH
Confidence 0111111111111112222233567789999999999999999999999999999888 4332 21 122333
Q ss_pred HHHHHHHHHHHHHhcCCCHHHH
Q 008185 514 QFLAALLPLIWIHNVPMSETII 535 (574)
Q Consensus 514 ~~~~~ll~l~~~~~vp~~~~~~ 535 (574)
.+++.+++.+...++||++++.
T Consensus 480 ~~~~~~~~~~~~~~lpet~~~~ 501 (505)
T TIGR00898 480 FGGLALLAGILTLFLPETKGVP 501 (505)
T ss_pred HHHHHHHHHHHHHcCcCCCCCC
Confidence 3444444455566789887643
No 65
>PRK11043 putative transporter; Provisional
Probab=99.91 E-value=1.4e-21 Score=207.70 Aligned_cols=324 Identities=15% Similarity=0.078 Sum_probs=212.9
Q ss_pred HHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHH
Q 008185 140 HMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACV 218 (574)
Q Consensus 140 ~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 218 (574)
.+++++|.++++.++..+++.++..+ .+++|+++||+ +||+.+..+.++..++..+.+..++ ++.+++.|
T Consensus 31 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~ 101 (401)
T PRK11043 31 AIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-----GRKPVLLAGLSLFALGSLGMLWVES----AAQLLVLR 101 (401)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-----CCcHHHHHHHHHHHHHHHHHHHhcC----HHHHHHHH
Confidence 46778999999999999999998766 78899999985 5666777777676666666655532 56678889
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHhhhcc
Q 008185 219 LLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAISFSAR 298 (574)
Q Consensus 219 ~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~~~lp 298 (574)
++.+++.+...+...+++.|..++++++...+..+....+|..+||.+++++.+..|||+.|++.+++.++..+..++++
T Consensus 102 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 181 (401)
T PRK11043 102 FVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLK 181 (401)
T ss_pred HHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcC
Confidence 99888877766667788999998888888888888888899999999999999999999999999888777666555566
Q ss_pred cccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHH
Q 008185 299 EESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRV 378 (574)
Q Consensus 299 Et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i 378 (574)
|++.... + +..+ ...++.+++|..+...+...+.......+....+++.. .+|+++.+.|+..+
T Consensus 182 ~~~~~~~--~----------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~ 245 (401)
T PRK11043 182 PSKKARK--Q----------SQDA---LTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILE-QMGYSPADIGLSYV 245 (401)
T ss_pred CCCCccc--c----------chHH---HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHH
Confidence 5432111 0 0001 12334456666554333222211111112222344443 47999999999888
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHH-HH
Q 008185 379 IGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPF-SM 457 (574)
Q Consensus 379 ~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~-~~ 457 (574)
...++.+++..+.+++.+|+++|+......++.+++.+....... . . .+.+..........+.+.....|. ..
T Consensus 246 ~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (401)
T PRK11043 246 PQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASL-L----S-HPSLVPLLIPFCVMAAANGAIYPIVVA 319 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH-h----c-cCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888999999999999999888665444433333222111110 0 0 111111111111111222223333 33
Q ss_pred HHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 008185 458 LLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLAS 495 (574)
Q Consensus 458 l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~ 495 (574)
...+..| +.+|++.|++++++..+..+++.+.|.+.+
T Consensus 320 ~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 320 QALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 3445555 579999999999988888888888777655
No 66
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.91 E-value=7e-23 Score=219.96 Aligned_cols=376 Identities=20% Similarity=0.191 Sum_probs=253.1
Q ss_pred hhHHHHHHhcCCChhHHHHHHHHhhhhhh-hhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcc-cCccc---h
Q 008185 136 ALNFHMAHNLSLHPSTLQLVQNSGNLPMV-AKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALF-PVAAK---A 210 (574)
Q Consensus 136 ~~~~~l~~~~~~s~~~~~l~~s~~~l~~~-~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~-~~~~~---~ 210 (574)
.+.+++.+.+|+++..+|++..+..+-.+ .+|+.|.++||.+.+.+||||+++++.++..+++.++... +.... .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 44557788899999999999998877554 5999999999988877799999999999988888877766 31111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cCccchHHHHHHHHHHHHHHHHHHHHHhhcc-------CChhHHHHH
Q 008185 211 LPNLMACVLLSNLGASITEVAKDALVAEYGQK-NGIVGLQSYAFMAAASGGILGNLFGGYFLLK-------TPPTTMFLV 282 (574)
Q Consensus 211 ~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~-~~rg~~~s~~~~~~~~G~~igp~igg~l~~~-------~gwr~~f~i 282 (574)
..++.+..++..++.+..+++..++.+|++++ ++|.++.+....+..+|.++...+.+.+.+. .+|++++++
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 22334555555788888889999999999975 7899999988888888887666666665532 169999999
Q ss_pred HHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceee
Q 008185 283 FAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCY 361 (574)
Q Consensus 283 ~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~ 361 (574)
.+++.++..++. +.+||+.....+. ....+.++ .++..++||.+....+..++.+..........+||
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~~~~--------~~~~~~~~---~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~ 251 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEVTEQ--------EKKISLRD---SLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYY 251 (428)
T ss_pred HHHHHHHHhhhhhheeeecccccccc--------cccccccc---chhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 998888877775 5689832221111 01112222 23445678877666555554333333444556677
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
.++.+|.+ ...+.......++.+++.++.+++.||+++|+.+..+.++.++..+....+.. .+.+..+...
T Consensus 252 ~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~i~~ 322 (428)
T PF13347_consen 252 FTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP--------GSPWLVLILF 322 (428)
T ss_pred HHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh--------hhHHHHHHHH
Confidence 77778766 56677777788888999999999999999999998888877766554322210 1122212212
Q ss_pred HHHHHHHHhhHHHHHHHHHhhcC-------CChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCC-CCChh-----
Q 008185 442 GLAETLAQFKLLPFSMLLARLCP-------QGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGD-YSSLP----- 508 (574)
Q Consensus 442 ~l~~~~~~~~~~p~~~l~~~~~p-------~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~-~~~l~----- 508 (574)
.+.+...+........+.+|.++ ++.+|..+|+.+...+++.++++.+.+.+.+..|++.+. .+.-.
T Consensus 323 ~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~~~~~~q~~~~~~~i 402 (428)
T PF13347_consen 323 ILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYDANAAVQSASALSGI 402 (428)
T ss_pred HHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcCCCcCcCCHHHHHHH
Confidence 22221112222222344555543 567899999999999999999999999999999987543 22211
Q ss_pred --HHHHHHHHHHHHHHHHHHhcCCC
Q 008185 509 --VGIVIQFLAALLPLIWIHNVPMS 531 (574)
Q Consensus 509 --~~~li~~~~~ll~l~~~~~vp~~ 531 (574)
....+.+++.+++++++.++|-+
T Consensus 403 ~~~~~~~p~~~~~~~~i~~~~y~l~ 427 (428)
T PF13347_consen 403 RILFSIVPAIFLLLAIIFMRFYPLT 427 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCC
Confidence 22334444445555555666644
No 67
>PRK10054 putative transporter; Provisional
Probab=99.91 E-value=3.2e-22 Score=212.51 Aligned_cols=351 Identities=12% Similarity=0.105 Sum_probs=224.5
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
|+..+. +.+..++..+.. ...+.++.++++++|.+..++++..+++.+...+ +|+.|.++||+ +||+.++++
T Consensus 6 ~~~~~~-l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-----g~k~~~~~~ 79 (395)
T PRK10054 6 RRSTSA-LLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-----DKKRYMLLA 79 (395)
T ss_pred CchHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CcchhHHHH
Confidence 344444 334444444443 4444455688888999999999999998776654 89999999985 456667667
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
.+...++..+.++.++ ++.+++++.+.+.+.+.......+...|..++++|++++++.+...++|.++||.+++++
T Consensus 80 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l 155 (395)
T PRK10054 80 ITAFASGFIAIPLVNN----VTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL 155 (395)
T ss_pred HHHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766666666655542 444556666665555555556678889999888999999999999999999999999988
Q ss_pred hccCChhHHHHHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhh
Q 008185 271 LLKTPPTTMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVA 349 (574)
Q Consensus 271 ~~~~gwr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~ 349 (574)
.+ .||+++|++.++..++..++. +++||++.+..+ + + +. . .+.++.+++|.++...+..++...
T Consensus 156 ~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~-~------~---~~---~-~~~~~~~~~~~~~~~~~~~~l~~~ 220 (395)
T PRK10054 156 VM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIAT-E------T---GS---V-WSPSVLLQDKALLWFTCSGFLASF 220 (395)
T ss_pred HH-hccCcHHHHHHHHHHHHHHHHHHHHhcccccccc-c------h---hh---h-hhhhhhccCceehHHHHHHHHHHH
Confidence 75 799999999887776665544 456665422110 0 0 00 0 112345677877665544333111
Q ss_pred hcccccccceeehc--cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhc
Q 008185 350 MVPVLSGSMFCYQT--QCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINL 427 (574)
Q Consensus 350 ~~~~~~~~~~~~~~--~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~ 427 (574)
....+....+.|.. +..+.+....+.......+..+......+++.+|+++|+.+..+.++.++.... +....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~---- 295 (395)
T PRK10054 221 VSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVG-FIFSG---- 295 (395)
T ss_pred HHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHH-HHHcc----
Confidence 11111111122222 234556666777766666666666677788889998888877665544443321 11110
Q ss_pred ccCcCcceEEeehhHHHHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 428 QFGVPNEVFVLCFAGLAETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 428 ~~~~~~~~~~l~~~~l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
.+.+ .+....+..+++.....|. .+++.+..|++.+|++++..+ ...+|.++||.++|.+.+.+|.
T Consensus 296 ----~~~~-~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~ 362 (395)
T PRK10054 296 ----NSLL-LWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPP 362 (395)
T ss_pred ----hHHH-HHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcCh
Confidence 0111 1111122223333444444 456788999999999999755 6778999999999999998874
No 68
>PRK09848 glucuronide transporter; Provisional
Probab=99.91 E-value=3.6e-21 Score=207.87 Aligned_cols=381 Identities=12% Similarity=0.014 Sum_probs=229.2
Q ss_pred hhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCc-cc--h
Q 008185 135 LALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVA-AK--A 210 (574)
Q Consensus 135 ~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~-~~--~ 210 (574)
..+..|+++.+|+++.++|++.++..+..++ +|++|.++||...+.+||||++..+.+...++..++...+.. .. .
T Consensus 29 ~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (448)
T PRK09848 29 LFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSK 108 (448)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchH
Confidence 3344578888999999999999998887665 899999999987665588999877776555444433222211 11 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cCccchHHHHHHH-----HHHHHHHHHHHHHHhhccC--ChhHHHHH
Q 008185 211 LPNLMACVLLSNLGASITEVAKDALVAEYGQK-NGIVGLQSYAFMA-----AASGGILGNLFGGYFLLKT--PPTTMFLV 282 (574)
Q Consensus 211 ~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~-~~rg~~~s~~~~~-----~~~G~~igp~igg~l~~~~--gwr~~f~i 282 (574)
...+++..++.+++.+...++..++..+++++ ++|....+....+ ..+|..++|++++...... +|.....+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~ 188 (448)
T PRK09848 109 VVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIV 188 (448)
T ss_pred HHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHH
Confidence 12223334455667777777778888888765 6787776554432 2355666666665432111 22222233
Q ss_pred HHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceee
Q 008185 283 FAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCY 361 (574)
Q Consensus 283 ~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~ 361 (574)
.+++..+..++. ...||+.....+ ....++ .++.+++||.+....+..++.+..........++|
T Consensus 189 ~~v~~~~~~~~~~~~~~e~~~~~~~-----------~~~~~~---~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~ 254 (448)
T PRK09848 189 LAIAGMVLYFICFKSTRENVVRIVA-----------QPSLKI---SLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFY 254 (448)
T ss_pred HHHHHHHHHHHHHcCcEeccCCCcc-----------CCCHHH---HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheee
Confidence 333333333333 346776432110 011222 23456788888766554444333333344456777
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
.++.+|.++...++..+...++.+++.++.+++.+|++.|+.+.++.++..+..+... +... .+.+. +...
T Consensus 255 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~-~~~~-------~~~~~-~~~~ 325 (448)
T PRK09848 255 VRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFF-WVSV-------WSLPV-ALVA 325 (448)
T ss_pred EeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH-HcCc-------hhHHH-HHHH
Confidence 8888898776655555555677888889999999999999998887766554433221 1100 01111 1111
Q ss_pred HHHHHHHH-hhHHHHHHHHHhhcCC-------ChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCC------h
Q 008185 442 GLAETLAQ-FKLLPFSMLLARLCPQ-------GCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSS------L 507 (574)
Q Consensus 442 ~l~~~~~~-~~~~p~~~l~~~~~p~-------~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~------l 507 (574)
.+..+++. +...+..++.++.+|+ +.+|.++|+++..+++|.++|+.+.+.+.+..|++...-+. .
T Consensus 326 ~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~~~~~~~~~~~~~~i 405 (448)
T PRK09848 326 LAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQVQTPEVIMGI 405 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHH
Confidence 22222332 2233345666676654 45799999999999999999999999999988875321111 1
Q ss_pred h-HHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Q 008185 508 P-VGIVIQFLAALLPLIWIHNVPMSETIIEKG 538 (574)
Q Consensus 508 ~-~~~li~~~~~ll~l~~~~~vp~~~~~~~~~ 538 (574)
. ...++.+++.+++++.++++|.+|++.+|.
T Consensus 406 ~~~~~~~p~~~~~~~~~~~~~y~l~~~~~~~~ 437 (448)
T PRK09848 406 RTSIALVPCGFMLLAFVIIWFYPLTDKKFKEI 437 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHeeCCHHHHHHH
Confidence 1 222444555556666677899988877653
No 69
>PRK15075 citrate-proton symporter; Provisional
Probab=99.91 E-value=1.3e-21 Score=210.54 Aligned_cols=363 Identities=12% Similarity=0.026 Sum_probs=216.2
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHH-HHHhhh--hhh---h-hhhheeeccccccCCCccc
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLV-QNSGNL--PMV---A-KPLYGILSDALYIGGAHRI 184 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~-~s~~~l--~~~---~-~pl~G~lsD~~~~~G~rRk 184 (574)
||.....+.++.+.+.++- ......+ .++++++.++.+.+.. .+...+ .+. + +++.|+++||+ +||
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-----Grr 86 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYAT-AIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-----GRR 86 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-----chH
Confidence 4556666777888888876 4444444 6777899887775543 333322 222 2 45689999985 566
Q ss_pred hhHhHHHHHHHHHHHHhhcccCccch----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHH
Q 008185 185 PYICIGVFLQILSWGPLALFPVAAKA----LPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGG 260 (574)
Q Consensus 185 ~~l~i~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~ 260 (574)
+.++.+.++..++..+++++++.... ...++++|++.+++.+...+....++.|..|+++|++++++...+..+|.
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~ 166 (434)
T PRK15075 87 KGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAV 166 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHH
Confidence 66667777777777777766532100 01357889999988877666667889999999999999999888877888
Q ss_pred HHHHHHHHHhh--------ccCChhHHHHHHHHHHHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHH
Q 008185 261 ILGNLFGGYFL--------LKTPPTTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATI 332 (574)
Q Consensus 261 ~igp~igg~l~--------~~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (574)
.+|+.+|+.+. +..|||++|++.++...+........||++....+.+ +.+ .++..+ ...
T Consensus 167 ~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~-----~~~----~~~~~~---~~~ 234 (434)
T PRK15075 167 VFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKH-----RPS----MREIFR---SLA 234 (434)
T ss_pred HHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhh-----ccc----cccHHH---HHH
Confidence 88888777653 4689999999865433222111223455432111000 000 011111 112
Q ss_pred cchhhHHHHHHH-HhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 008185 333 GEESISYPLTWL-VASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILY 411 (574)
Q Consensus 333 ~~~~v~~~~l~~-~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~ 411 (574)
+++..+...... ++............|.|+++.+|+++.+.++......++.+++..+.+++.||+++|+.+..+.++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~ 314 (434)
T PRK15075 235 ANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLA 314 (434)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 233333221111 1111111112222455667778999888888888888888899999999999999998876654433
Q ss_pred HHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHh-HHHHHHHHH
Q 008185 412 ASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCL-SSIASGFLG 490 (574)
Q Consensus 412 ~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~l-g~~lg~~i~ 490 (574)
.+..+..+..... .+..........+..............+..|..|++.||++.|+.+.+... ++.++|.+.
T Consensus 315 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~ 388 (434)
T PRK15075 315 ILTAYPALSWLVA------APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAIS 388 (434)
T ss_pred HHHHHHHHHHHHc------CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHH
Confidence 2221111111100 011100001011111111111122345678999999999999997666654 578899999
Q ss_pred HHHHHhhCc
Q 008185 491 VGLASLTGI 499 (574)
Q Consensus 491 g~l~~~~g~ 499 (574)
|.+.+..|.
T Consensus 389 g~i~~~~g~ 397 (434)
T PRK15075 389 TWLIHVTGD 397 (434)
T ss_pred HHHHHhcCC
Confidence 999998763
No 70
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.90 E-value=2.3e-22 Score=215.31 Aligned_cols=344 Identities=13% Similarity=0.090 Sum_probs=195.0
Q ss_pred hhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchH
Q 008185 133 PWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKAL 211 (574)
Q Consensus 133 ~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~ 211 (574)
..+..+.++++++|+++.++|++.+++.+...+ +|++|+++||+ +||+.++++.....+...............
T Consensus 29 ~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-----g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (420)
T PRK09528 29 WFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-----GLKKHLLWIISGLLVLFGPFFIYVFAPLLQ 103 (420)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455578888999999999999999998766 88999999995 455555444333332222111100000000
Q ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHH
Q 008185 212 PNLMACVLLSNLGASIT----EVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLL 287 (574)
Q Consensus 212 ~~l~~~~~l~~~g~~~~----~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~ 287 (574)
.......+++++..+.. ......+..+. .++++..++.......+|.++||.++|.+.+ .+|+++|++.++..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~ 180 (420)
T PRK09528 104 YNILLGAIVGGIYLGFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSA 180 (420)
T ss_pred HHHHHHHHHHHHHhhhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHH
Confidence 00111122222211111 11122222222 2456777787788888999999999998876 48999999988777
Q ss_pred HHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccc--
Q 008185 288 SLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQC-- 365 (574)
Q Consensus 288 ~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~-- 365 (574)
++..++.+++++++.+..+.++++ +++. .+...++.++.+++|.++...++.+............++.|..+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (420)
T PRK09528 181 LILLVLLFFAKPDAPSTAKVANAL-GANA----SAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFA 255 (420)
T ss_pred HHHHHHHhcccccccchhhhccch-hccc----ccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 666655554433222211100000 0000 011223444567788765544433221111111111233333332
Q ss_pred -cCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHH
Q 008185 366 -LNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLA 444 (574)
Q Consensus 366 -~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~ 444 (574)
.+.+..+.|+......++..++..+.+++.||+++|+.+..+.++..+..+. ..+. ++.+..+....+.
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l-~~~~---------~~~~~~~~~~~l~ 325 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIG-SGFA---------TGPLEVSILKLLH 325 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHH-HHhc---------ccHHHHHHHHHHH
Confidence 3566677888888778888888899999999999999887766655443322 1111 1111111111111
Q ss_pred HHHHHhhHHHHHHHHHhhcCCChhHHHHHH-HHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 445 ETLAQFKLLPFSMLLARLCPQGCEGSLTSF-SASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 445 ~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl-~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
.............++.+..|++.+++.++. +++..++|.++++.+.|.+.+..|+
T Consensus 326 g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~ 381 (420)
T PRK09528 326 AFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGF 381 (420)
T ss_pred HHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 111112222334567888999999988766 6777899999999999999998774
No 71
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.90 E-value=1.4e-21 Score=206.74 Aligned_cols=331 Identities=13% Similarity=0.006 Sum_probs=205.9
Q ss_pred chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCcc---chhHhHHHHHHHHHHHHhhcccCc
Q 008185 132 FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHR---IPYICIGVFLQILSWGPLALFPVA 207 (574)
Q Consensus 132 ~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rR---k~~l~i~~~~~~~~~~~~~~~~~~ 207 (574)
+..+.++.++++ +|.|..++|+..+++.++..+ +|++|+++||+ | || ++.+.+.... .........++
T Consensus 22 ~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~---g-~~~~~~~~~~~~~~~---~~~~~~~~~~~ 93 (382)
T PRK11128 22 VFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP---S-QLIPALRLLALLTLL---FAVAFWFGAHS 93 (382)
T ss_pred HHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh---c-chHHHHHHHHHHHHH---HHHHHHHhccc
Confidence 344445556655 899999999999999988765 89999999985 2 32 1222222111 11122222222
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHH
Q 008185 208 AKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLL 287 (574)
Q Consensus 208 ~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~ 287 (574)
++.+++.|++.+++.+...+..++++.|. +++|+++++......++|.++||+++|++.+.+|||..|++.++..
T Consensus 94 ---~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~ 168 (382)
T PRK11128 94 ---FWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGV 168 (382)
T ss_pred ---HHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHH
Confidence 56667788887776665555567777776 3557777888888889999999999999999999999999887655
Q ss_pred HHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccC
Q 008185 288 SLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLN 367 (574)
Q Consensus 288 ~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g 367 (574)
++..+..++.||+++... .+ +.. ++..+..++.+++|.++...+..++............+.|.. ++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~-~~------~~~----~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g 236 (382)
T PRK11128 169 ASMLLGQLLRPTIMPQGE-SR------QQE----SAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAG 236 (382)
T ss_pred HHHHHHHHccCCCCCccc-cc------ccc----ccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCC
Confidence 444333344565432111 00 000 001123345678888876655443311111111222233443 489
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHH
Q 008185 368 INPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETL 447 (574)
Q Consensus 368 ~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~ 447 (574)
+++.+.|+......++.++...+.+++.||++.++.+..+.++.++..+. +... ++.+..+....+....
T Consensus 237 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~l~g~~ 306 (382)
T PRK11128 237 YSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGL-MGST---------TALPWLIVIQILHCGT 306 (382)
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-HHhh---------hhHHHHHHHHHHHHHH
Confidence 99999999888888888888899999999999999877776655543321 1111 1112111212222211
Q ss_pred HHhhHHHHHHHHHhhcCCChhHHHHHHHHHH-HHhHHHHHHHHHHHHHHhhC
Q 008185 448 AQFKLLPFSMLLARLCPQGCEGSLTSFSASA-LCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 448 ~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~-~~lg~~lg~~i~g~l~~~~g 498 (574)
......+...+..+. +++.+++++++++.. ..+|.++||.++|.+.|.+|
T Consensus 307 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g 357 (382)
T PRK11128 307 FTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG 357 (382)
T ss_pred HHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 222233334556665 566678999988744 45777999999999999876
No 72
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.90 E-value=6.3e-22 Score=204.42 Aligned_cols=324 Identities=20% Similarity=0.141 Sum_probs=230.1
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
+.+.++...+.. ......+.+. +++|.+..+.++..++..++..+ .|++|+++||+ +||+.+.++.++..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-----g~r~~~~~~~~~~~~~ 77 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-----GRRRVLLLGLLLFALG 77 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-----CCchhhHHHHHHHHHH
Confidence 344455555544 4444444444 55899999999999999887755 88999999985 4666777777777777
Q ss_pred HHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 008185 198 WGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPT 277 (574)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr 277 (574)
........+ .+.+++.|++.+++.+...+...+++.|..++++|++.+++......+|..+||.+++.+.+..+||
T Consensus 78 ~~~~~~~~~----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 153 (352)
T cd06174 78 SLLLAFASS----LWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWR 153 (352)
T ss_pred HHHHHHhcc----HHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 776666532 5667888999988888888888999999999999999999999999999999999999999988999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhccccccc
Q 008185 278 TMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGS 357 (574)
Q Consensus 278 ~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~ 357 (574)
+.|++.++..++..+..++++ |.++...+..++...........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 197 (352)
T cd06174 154 WLFLILAILGLLLALLLLFLL------------------------------------RLLLLLALAFFLLSFGYYGLLTY 197 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHH------------------------------------HHHHHHHHHHHHHHhHHHHHHHH
Confidence 999999887776665544443 11111111111111111112222
Q ss_pred ceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchh-HHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceE
Q 008185 358 MFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRK-LVGAVQILYASSLLLDLILVRQINLQFGVPNEVF 436 (574)
Q Consensus 358 ~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~-ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~ 436 (574)
.+.+..+.+|+++.+.+.......++.+++..+.+++.||+++|+ .+..+.++..++.+... .. ++.+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~---------~~~~~ 267 (352)
T cd06174 198 LPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLA-LA---------PSLAL 267 (352)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-Hh---------ccHHH
Confidence 334555566899999999999999999999999999999999998 77777666555443221 11 11111
Q ss_pred EeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 437 VLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 437 ~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
......+..............+..|..|+++||+.+|+.+...++|..+++.+.|.+.+..++
T Consensus 268 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~ 330 (352)
T cd06174 268 LLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGY 330 (352)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCc
Confidence 111112222222233334467788999999999999999999999999999999999886553
No 73
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.90 E-value=2.2e-21 Score=205.06 Aligned_cols=342 Identities=12% Similarity=0.038 Sum_probs=218.6
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
+..++. +.++.+..++.. +..+.++.+ .+++|.|..++|++.+.+.++..+ .|++|+++||+ +||+.+..+
T Consensus 5 ~~~~~~-~~~~~~~~~~~~~~~~~~lp~~-~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-----g~k~~~~~~ 77 (381)
T PRK03633 5 TRPVLL-LLCGLLLLTLAIAVLNTLVPLW-LAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-----GFNRSYYLA 77 (381)
T ss_pred HHHHHH-HHHHHHHHHHhhhhHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-----HHHHHHHHH
Confidence 444444 445555555554 555556655 456899999999999999998766 88899999985 566666667
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
.++..++....+..++ ++.++++|++.+++.+...+...+.+.|..++++|+++++++..+..+|..+||.+++.+
T Consensus 78 ~~~~~~~~~~~~~~~~----~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 78 SLIFAAGCAGLGLMVG----FWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred HHHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7777777666655532 567788899999988877666667777888888999999999999999999999999988
Q ss_pred hccCChhHHHHHHHHHHHHHHHHhh-hcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhh
Q 008185 271 LLKTPPTTMFLVFAVLLSLQLAISF-SAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVA 349 (574)
Q Consensus 271 ~~~~gwr~~f~i~ai~~~~~~~~~~-~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~ 349 (574)
.+.. ++..+|..+........+.+ ..+|++.+ + + + .+ +.++.+++|..+......++...
T Consensus 154 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~------~--~~-------~~~~~~~~~~~~~~~~~~~~~~~ 214 (381)
T PRK03633 154 STEL-MSVLPWVTGLVLAAILPLLFTRILNQQAE--N-H------D--ST-------SIWPMLKLRQARLGVNGCIISGI 214 (381)
T ss_pred cccc-cchHHHHHHHHHHHHHHHHHhcccCCCCC--C-C------C--CC-------CHHHHHHhcchHHHHHHHHHHHH
Confidence 7653 33344444333222222222 22322110 0 0 0 00 11123445554432221111111
Q ss_pred hcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhccc
Q 008185 350 MVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQF 429 (574)
Q Consensus 350 ~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~ 429 (574)
........++.|..+ .|.++.+.|.......++.+++....+++.||+++|+++..+..+..+..+.. . ..
T Consensus 215 ~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~--~-~~----- 285 (381)
T PRK03633 215 VLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAM--L-SQ----- 285 (381)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHH--h-hh-----
Confidence 111111223445544 68998888988888888889999999999999999988776655544432211 1 00
Q ss_pred CcCcceEEeehhHHHHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 430 GVPNEVFVLCFAGLAETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 430 ~~~~~~~~l~~~~l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
..+. . .....+.+.....|. .....|..|++.++.+.+.++...++|..+||.++|.+.+..|+
T Consensus 286 ----~~~~-~-~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~ 350 (381)
T PRK03633 286 ----AAMA-P-ALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSD 350 (381)
T ss_pred ----HHHH-H-HHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 0000 0 111112222233343 45677888888888888888888999999999999999998764
No 74
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.90 E-value=7.2e-22 Score=236.96 Aligned_cols=331 Identities=11% Similarity=0.046 Sum_probs=218.4
Q ss_pred hHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhH--HHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHH
Q 008185 150 STLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICI--GVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGAS 226 (574)
Q Consensus 150 ~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~ 226 (574)
...++..+++.+++++ +|++|.++||+ +||+.+.. ...+.+....+.++..+ +++.++++|++++++.+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~-----~rk~~~~~~~~~~~~~~~~~~~~~~~~---s~~~l~~~~~l~gi~~a 123 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKY-----DKAKLAKILKFAEIGIAALAIYGFHLN---SVPLLFAALFLMGIHSA 123 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhc-----cHHHHHHHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHH
Confidence 4567788888898865 99999999995 45554321 11111122222222222 26778899999999999
Q ss_pred HHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHhhhcccccccccc
Q 008185 227 ITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAISFSAREESLGLAQ 306 (574)
Q Consensus 227 ~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~ 306 (574)
+..+...+++.|++++++|+.++++.+++..+|.++||+++|++.+..||++.|++.++..++.+++.+++||++.....
T Consensus 124 ~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (1140)
T PRK06814 124 LFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNAAPD 203 (1140)
T ss_pred hhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCCCCC
Confidence 98888899999999999999999999999999999999999999999999999965555555444445677776432111
Q ss_pred cchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHH
Q 008185 307 VSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLS 386 (574)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~li 386 (574)
.+. + ... .++....++.+.++|.++...+..++.+.....+...++.|..+.+|.++.+.|++.....+|+++
T Consensus 204 ~~~-~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~i 276 (1140)
T PRK06814 204 LKI-D---RNI---IRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAV 276 (1140)
T ss_pred Cee-c---cch---HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 000 0 011 111122344456777777665544443333333344566677888999999999999999999999
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhh---hc----c---cCcCcceEEeehhHHHHHHHHhhHHHHH
Q 008185 387 LTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQI---NL----Q---FGVPNEVFVLCFAGLAETLAQFKLLPFS 456 (574)
Q Consensus 387 g~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~---~~----~---~~~~~~~~~l~~~~l~~~~~~~~~~p~~ 456 (574)
|..+.+++.++...++.+..+.++.+++.+...+..... .. . ....+.+.......+....+++...+..
T Consensus 277 g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 356 (1140)
T PRK06814 277 GSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLF 356 (1140)
T ss_pred HHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHH
Confidence 999999998877666655544444333332111110000 00 0 0001111111222223333344555667
Q ss_pred HHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 008185 457 MLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLAS 495 (574)
Q Consensus 457 ~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~ 495 (574)
+++++.+|++.+|+++|+.+++.+++.++++.++|.+.+
T Consensus 357 ~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 357 AALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred HHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999888865
No 75
>PRK10133 L-fucose transporter; Provisional
Probab=99.90 E-value=3.3e-21 Score=207.43 Aligned_cols=345 Identities=12% Similarity=0.016 Sum_probs=218.2
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
+.+.+|..++.. +.....| .+++++|+++.+.++..+.+.+++.+ .|+.|+++||+ +||+.+.++.++.+++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~p-~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-----G~r~~l~~g~~~~~~~ 104 (438)
T PRK10133 31 LCSLFFLWAVANNLNDILLP-QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-----SYKAGIITGLFLYALG 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHHHHHHHHHH
Confidence 555556666655 4444444 56888999999999999999998876 88999999985 6777777787777777
Q ss_pred HHHhh--cccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhc-c-
Q 008185 198 WGPLA--LFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLL-K- 273 (574)
Q Consensus 198 ~~~~~--~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~-~- 273 (574)
..++. ...+ ++..++++|++.++|.+..++....++.|..++++|+..+++......+|+.+||.+++.+.. .
T Consensus 105 ~~l~~~~~~a~---~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 105 AALFWPAAEIM---NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 76542 1222 267788899999999999999988999988766666667888888888999999999876541 0
Q ss_pred ------------------------CChhHHHHHHHHHHHHHHHHh--hhcccccccccccchhcchhhhhhhhHHHHHHH
Q 008185 274 ------------------------TPPTTMFLVFAVLLSLQLAIS--FSAREESLGLAQVSYQNVASKSIAQSIKKQFSD 327 (574)
Q Consensus 274 ------------------------~gwr~~f~i~ai~~~~~~~~~--~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (574)
.+||++|+..+.+..+..++. ..+||.+... .++ ++ . ....+.
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~--~~~-----~~-~---~~~~~~ 250 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDN--HSD-----AK-Q---GSFSAS 250 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc--ccc-----cc-c---cchhhh
Confidence 256666764433333222222 2345532111 000 00 0 011123
Q ss_pred HHHHHcchhhHHHHHHHHhHhhhcccccccceee-hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHH
Q 008185 328 LIATIGEESISYPLTWLVASVAMVPVLSGSMFCY-QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGA 406 (574)
Q Consensus 328 ~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~ 406 (574)
.++++++|.++...+..++............+.| .++.+|+++.+.|+......++.++|.++.+++.+|+++|+++..
T Consensus 251 ~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~ 330 (438)
T PRK10133 251 LSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAA 330 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 3455677776654433333111111111112223 456789999999999999999999999999999999999998777
Q ss_pred HHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHH
Q 008185 407 VQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIA 485 (574)
Q Consensus 407 ~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~l 485 (574)
+.++..+..++ ..+. +..+ .+ ......+++.....|. .....+..|+ ..+++.++.. +..+|..+
T Consensus 331 ~~~~~~~~~~~-~~~~---------~~~~-~~-~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~-~~~~g~~~ 396 (438)
T PRK10133 331 YALIAMALCLI-SAFA---------GGHV-GL-IALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIV-MTIIGGGI 396 (438)
T ss_pred HHHHHHHHHHH-HHHc---------CChH-HH-HHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHh-HHhccchH
Confidence 65554433221 1111 1110 01 1112222333334443 4556666655 4677777775 45577888
Q ss_pred HHHHHHHHHHhhC
Q 008185 486 SGFLGVGLASLTG 498 (574)
Q Consensus 486 g~~i~g~l~~~~g 498 (574)
+|.+.|.+.+..|
T Consensus 397 ~~~i~G~l~~~~g 409 (438)
T PRK10133 397 VTPVMGFVSDAAG 409 (438)
T ss_pred HHHHHHHHHHhcc
Confidence 8888888888765
No 76
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.90 E-value=1e-22 Score=221.00 Aligned_cols=365 Identities=12% Similarity=0.055 Sum_probs=218.5
Q ss_pred hcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHH
Q 008185 144 NLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSN 222 (574)
Q Consensus 144 ~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~ 222 (574)
+++.+..+.|++.+.+.+++.+ +++.|+++||+ +||..+.++.++..++..+....... .+..+++.|++.+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----g~r~~l~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~~~G 142 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-----VFKWSIGIGMFLSSVISIVIPWAAGG--GIALVVFCRVIQG 142 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-----CcchhhHHHHHHHHHHHHHHHHHHHc--CchHHHHHHHHHH
Confidence 6899999999999999999877 78899999995 45556666666655555444322111 1455788899999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhcc-CChhHHHHHHHHHHHHHHHHhh-hcccc
Q 008185 223 LGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLK-TPPTTMFLVFAVLLSLQLAISF-SAREE 300 (574)
Q Consensus 223 ~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~-~gwr~~f~i~ai~~~~~~~~~~-~lpEt 300 (574)
++.+...+....++.|..|+++|++++++...+..+|.++||++++++.+. .|||+.|++.+++.++..++.+ +.+|+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 143 LAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred HhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 998888888888999999999999999999999999999999999999888 4999999999888777666554 45554
Q ss_pred cccccccchhcchhhhhhhhH------HHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHH
Q 008185 301 SLGLAQVSYQNVASKSIAQSI------KKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIG 374 (574)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~g 374 (574)
+....+.++++. +...+.. .+...++++.++++.++...+..+..+.....+...+|.|+.+.+|++..+.|
T Consensus 223 p~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g 300 (465)
T TIGR00894 223 PSIHPCISKFEK--KYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENG 300 (465)
T ss_pred cccCCCCCHHHH--HHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhH
Confidence 432211111000 0000000 00011244567788777665544443333333334456677788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCch-----hHH--HHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHH
Q 008185 375 MSRVIGQSMLLSLTVFYDRYWKKVPLR-----KLV--GAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETL 447 (574)
Q Consensus 375 l~~i~~~ig~lig~~l~~~l~~r~~~r-----~ll--~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~ 447 (574)
+......++.+++..+.+++.||..+| +.. ....+......+..+ ..... ..+.+..+....+..+.
T Consensus 301 ~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~l~~~~ 374 (465)
T TIGR00894 301 LLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAY-ALPYL-----SAAFYLTIIILTLANAV 374 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHH-HHHHc-----CCchHHHHHHHHHHHHH
Confidence 887666666666666666666553322 111 111111100011111 11000 00111111111111111
Q ss_pred HHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHHHHHHh
Q 008185 448 AQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLPLIWIHN 527 (574)
Q Consensus 448 ~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l~~~~~ 527 (574)
.............+..|+ ..|++.|+.+...++|..++|.+.|.+.+..+ .......+.+.++..+++.++...
T Consensus 375 ~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~-----~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 375 SSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDS-----KNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred hhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCC-----chHHHHHHHHHHHHHHHHHHHeee
Confidence 111122222334466654 88999999999988888888888776655321 112334445555555555544444
Q ss_pred cC
Q 008185 528 VP 529 (574)
Q Consensus 528 vp 529 (574)
++
T Consensus 449 ~~ 450 (465)
T TIGR00894 449 FG 450 (465)
T ss_pred ee
Confidence 44
No 77
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.90 E-value=3.4e-21 Score=205.32 Aligned_cols=378 Identities=11% Similarity=0.030 Sum_probs=221.8
Q ss_pred cccccCCcCCCCCCcccccccccccccccchhHHHHHHHHHHHhhhcc-chhhhhHHHH-HHhcCCChhHHHHHHHHhhh
Q 008185 84 ESKRLGSWAGGGGDEERRRDFGEVGINNFNKQMLVLCGLGYWVQGFRC-FPWLALNFHM-AHNLSLHPSTLQLVQNSGNL 161 (574)
Q Consensus 84 ~~~~~v~w~~~~d~~np~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l-~~~~~~s~~~~~l~~s~~~l 161 (574)
.+..|.+|| ||||+ -|.+... .--|+.+. ++..+|..++.. ....++...+ ++++|+|+.+.+++.+++.+
T Consensus 9 ~~~~~~~w~-pe~~~----~w~~~~~-~~a~r~l~-~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l 81 (462)
T PRK15034 9 SRYLLRDWK-PENPA----FWENKGK-HIARRNLW-ISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSV 81 (462)
T ss_pred CcccccCCC-CCChH----HHhhcCc-hHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHH
Confidence 344577787 66555 3333320 00224444 444455556655 4444433344 44799999999999999998
Q ss_pred hhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008185 162 PMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPV-AAKALPNLMACVLLSNLGASITEVAKDALVAEY 239 (574)
Q Consensus 162 ~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~ 239 (574)
.+.+ +.+.|++.||+ | .|| ++.++.++..+....++++.+ ...++..+++.|++.+++ +...+.....+.+.
T Consensus 82 ~~al~rip~G~l~Dr~---G-~R~-v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~w 155 (462)
T PRK15034 82 SGALLRVPYSFMVPIF---G-GRR-WTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFF 155 (462)
T ss_pred HHHHHHHHHHHHHHHh---C-ChH-HHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHH
Confidence 8766 67789999996 4 344 455566666666666665411 112367788899998887 44555567778888
Q ss_pred hcccCccchHHHHHHHHHHHHHHHHHHHHHhh-----c-------------cCChhHHHHHHHHHHHHHHHHhh-hcccc
Q 008185 240 GQKNGIVGLQSYAFMAAASGGILGNLFGGYFL-----L-------------KTPPTTMFLVFAVLLSLQLAISF-SAREE 300 (574)
Q Consensus 240 ~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~-----~-------------~~gwr~~f~i~ai~~~~~~~~~~-~lpEt 300 (574)
.++++||.++++.....++|..++++++..++ + ..+||.++++.+++.++..++.+ ++++.
T Consensus 156 fp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 156 FPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred CCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999886555566655544443322 2 23478888777766666555544 44443
Q ss_pred cccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHH
Q 008185 301 SLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIG 380 (574)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~ 380 (574)
+.. + .+ .++.+..+|+|..|...++.+++|.....+...+|+|..+.+. ...........
T Consensus 236 ~~~--~------------~~----~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~ 295 (462)
T PRK15034 236 ASS--R------------AS----IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFG 295 (462)
T ss_pred ccc--c------------cC----HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHH
Confidence 211 0 01 1233446899999988887777676655555566677666442 22222223334
Q ss_pred HHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHHHH
Q 008185 381 QSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSMLLA 460 (574)
Q Consensus 381 ~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~ 460 (574)
.+...+..++.+++.||++.++++.++.++..++.......... . ...+...+...+..++... ++......-++.
T Consensus 296 ~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~-~--~~~~~~~~~~~~~~l~~~~-G~gngsvfk~ip 371 (462)
T PRK15034 296 PFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPG-T--GSGNFIAFYAVFMGLFLTA-GLGSGSTFQMIA 371 (462)
T ss_pred HHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcc-c--cccHHHHHHHHHHHHHHHh-cccchHHHHhhH
Confidence 45555566788999999999998887776555544322222110 0 0000011111111111111 111112222333
Q ss_pred hhcCC---------------------ChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Q 008185 461 RLCPQ---------------------GCEGSLTSFSASALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 461 ~~~p~---------------------~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g 498 (574)
+++|+ ++.|.+.|+......+|+.+-|.+.|...+..|
T Consensus 372 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g 430 (462)
T PRK15034 372 VIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTG 430 (462)
T ss_pred HHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcC
Confidence 44442 257888999999999988888888777777665
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.89 E-value=3.3e-21 Score=231.45 Aligned_cols=335 Identities=13% Similarity=0.018 Sum_probs=218.5
Q ss_pred HHHHhcCCC--hhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHH
Q 008185 140 HMAHNLSLH--PSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMA 216 (574)
Q Consensus 140 ~l~~~~~~s--~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 216 (574)
++..+++.+ ....+++.+++.+++++ .|++|+++||+ +||+.++++.++.++...+..+... ..+++.+++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-----grk~~l~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ 108 (1146)
T PRK08633 35 TLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-----SKNRVIRIVKLFEVGLTLLIVLAYY-LGWFWLAFA 108 (1146)
T ss_pred HHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-----cHHHHHHHHHHHHHHHHHHHHHHHH-HccHHHHHH
Confidence 444445654 34468888888888765 88999999985 5666666555443333332222110 012677888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhcc---------CChhHHHHHHHHHH
Q 008185 217 CVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLK---------TPPTTMFLVFAVLL 287 (574)
Q Consensus 217 ~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~---------~gwr~~f~i~ai~~ 287 (574)
+|++.+++.+...+...+++.|+.++++|+.++++...+..+|.++||++++++.+. .+|+|.+.+.++..
T Consensus 109 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (1146)
T PRK08633 109 VTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAV 188 (1146)
T ss_pred HHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHH
Confidence 999999999988888889999999999999999999999999999999999998865 24555555544444
Q ss_pred HHHHHH-hhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehcccc
Q 008185 288 SLQLAI-SFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCL 366 (574)
Q Consensus 288 ~~~~~~-~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 366 (574)
++..++ .+++||++.......++ +. ....++..+.++.++++|.++..++..++.+.........++.|+.+.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (1146)
T PRK08633 189 AVLGLIFAYRLPKVPAAAPEVFDK----KK-YLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVL 263 (1146)
T ss_pred HHHHHHHHhcCcCCCCCCcccccc----cc-cccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 333333 45677765432211000 00 0011112233444567777665554443323333333344566777789
Q ss_pred CCCch-hHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHH
Q 008185 367 NINPS-VIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAE 445 (574)
Q Consensus 367 g~s~~-~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~ 445 (574)
|++.. ..|++.....++.+++.++.+++.+|++.++++.++.++.+++.++. .+. .+.+..++...+..
T Consensus 264 g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~~~~~~g 333 (1146)
T PRK08633 264 GLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLL-PTA---------PSLASVLVLFFLFG 333 (1146)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHH-HHh---------hhHHHHHHHHHHHH
Confidence 99998 89999999999999999999999999988877766655544433221 111 11111111122222
Q ss_pred HHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 008185 446 TLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLAS 495 (574)
Q Consensus 446 ~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~ 495 (574)
+..++...+..+++.+.+|++.+|+++|+.+++.++|..+++.+++.+..
T Consensus 334 ~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 334 FSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22334445566788899999999999999999999999888888776654
No 79
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.89 E-value=6e-23 Score=206.71 Aligned_cols=328 Identities=17% Similarity=0.151 Sum_probs=238.0
Q ss_pred hcCCChhHHHHHHHHhhhhh-hhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHH
Q 008185 144 NLSLHPSTLQLVQNSGNLPM-VAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSN 222 (574)
Q Consensus 144 ~~~~s~~~~~l~~s~~~l~~-~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~ 222 (574)
+.+-+.+++|++++...+.. .+.|+.|++.||+ ++|..+++|..+++.+..++++... ++.+++.|.+++
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-----Gy~ipm~~Gl~vmf~sTilFafg~s----y~~l~vAR~LQg 170 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-----GYKIPMVAGLFVMFLSTILFAFGNS----YPMLFVARSLQG 170 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-----ccccHHHHHHHHHHHHHHHHHHcch----hHHHHHHHHHhh
Confidence 35567789999999988765 5599999999986 4555566798889999988887754 677899999999
Q ss_pred HHHHHHHHHHHHHHHhhhcc-cCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHhhhc-ccc
Q 008185 223 LGASITEVAKDALVAEYGQK-NGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAISFSA-REE 300 (574)
Q Consensus 223 ~g~~~~~~~~~a~i~d~~~~-~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~~~l-pEt 300 (574)
+|.+++++...++++|..++ ++|+.+||+.-.+.++|-++||.+||++.+..|.+..|.+++++.++-.++.+++ +.+
T Consensus 171 vgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 171 VGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred hhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcc
Confidence 99999999999999999987 6789999999999999999999999999999999999999999998888887654 333
Q ss_pred cccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHH
Q 008185 301 SLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIG 380 (574)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~ 380 (574)
+.+... .++-.++++++++|.++....-+..+..........++.+..+.+.-+.++.|+.++..
T Consensus 251 ~~~~~~---------------~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~ 315 (464)
T KOG3764|consen 251 EMDPDS---------------TEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPA 315 (464)
T ss_pred ccCccc---------------cccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeeccc
Confidence 322110 01112456778889887665433332222222333445566677776667999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHHHH
Q 008185 381 QSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSMLLA 460 (574)
Q Consensus 381 ~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~ 460 (574)
.+..++++.+.+.+.+|++..+.+.....+.++ ++.. ..+.-.+ +....+.......+........++|.+.++.
T Consensus 316 ~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~-G~~~-~~iP~~~---~~~~L~vp~~~l~~~i~~~dasl~P~l~~lv 390 (464)
T KOG3764|consen 316 SLSYAIGTNLFGKLADKYPHLRWLLSLGGLATV-GVSS-GPIPFAT---SIAQLWVPNFGLGFGIGLADASLIPTLGYLV 390 (464)
T ss_pred ccchhccCchHHHHHHhcCchhHHHHHHHHHHH-HHHh-chhHhhh---hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhc
Confidence 999999999999999999854443322211111 1111 1111000 0111111122233333444567888877777
Q ss_pred hhcCCC---hhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcc
Q 008185 461 RLCPQG---CEGSLTSFSASALCLSSIASGFLGVGLASLTGIT 500 (574)
Q Consensus 461 ~~~p~~---~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~ 500 (574)
+....+ ..|+++++.....++|.++||.++|.+.+.+|.+
T Consensus 391 d~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~ 433 (464)
T KOG3764|consen 391 DPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFE 433 (464)
T ss_pred chhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHH
Confidence 766666 8899999999999999999999999999998864
No 80
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.88 E-value=3.8e-21 Score=202.14 Aligned_cols=330 Identities=15% Similarity=0.111 Sum_probs=206.6
Q ss_pred CChhHHHHHHHHhhh--hh---hh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccc----hHHHHHH
Q 008185 147 LHPSTLQLVQNSGNL--PM---VA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAK----ALPNLMA 216 (574)
Q Consensus 147 ~s~~~~~l~~s~~~l--~~---~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~----~~~~l~~ 216 (574)
.+.++.++..+...+ ++ .+ .|++|+++||+ +||+.+.++.++..++..+.+..++... ....+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-----g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-----GRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLL 101 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-----hhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHH
Confidence 455666655544322 22 23 67899999985 5666677777777777776666653210 0123567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhh--------ccCChhHHHHHHHHHHH
Q 008185 217 CVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFL--------LKTPPTTMFLVFAVLLS 288 (574)
Q Consensus 217 ~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~--------~~~gwr~~f~i~ai~~~ 288 (574)
.|++++++.+...+...+++.|..++++|+..+++...+..+|.++++.+++.+. +..+||+.|++.+++.+
T Consensus 102 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 181 (394)
T TIGR00883 102 ARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVL 181 (394)
T ss_pred HHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHH
Confidence 7999998888777777888999999999999999999999999999998887653 35799999998776655
Q ss_pred HHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchh--hHHHHHHHHhHhhhcccccccceeehcccc
Q 008185 289 LQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEES--ISYPLTWLVASVAMVPVLSGSMFCYQTQCL 366 (574)
Q Consensus 289 ~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 366 (574)
+..+....+||++....+.+++ +... ++.++.++++. ++......++............+.|.++.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (394)
T TIGR00883 182 IGLYLRRNLEETPVFEKAQEKH----KKKR-------GPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTL 250 (394)
T ss_pred HHHHHHHhcCCChhHHHHHhcc----cccc-------CCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5444344567765332111000 0000 11122233332 333333332222222222333455666778
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHH
Q 008185 367 NINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAET 446 (574)
Q Consensus 367 g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~ 446 (574)
|.++.+.+.......++.+++..+.+++.||+++|+.+..+..+..+..+........ ..+.+.......+...
T Consensus 251 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~ 324 (394)
T TIGR00883 251 GLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLD------SGSFTLFFFLVLGLAL 324 (394)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhc------CCchHHHHHHHHHHHH
Confidence 9999999988888888889999999999999999987665444333322111111100 0111111111122222
Q ss_pred HHHhhHHHHHHHHHhhcCCChhHHHHHHHH-HHHHhHHHHHHHHHHHHHHhhC
Q 008185 447 LAQFKLLPFSMLLARLCPQGCEGSLTSFSA-SALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 447 ~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~-~~~~lg~~lg~~i~g~l~~~~g 498 (574)
..+....+...++.|..|++.|++++|+.. ....+|..++|.++|.+.+..|
T Consensus 325 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 325 IGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 223334455678899999999999999854 4456788899999999999876
No 81
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.88 E-value=1.5e-19 Score=194.83 Aligned_cols=365 Identities=15% Similarity=0.119 Sum_probs=237.5
Q ss_pred HHHHHHhhhh-hhhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHH
Q 008185 153 QLVQNSGNLP-MVAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVA 231 (574)
Q Consensus 153 ~l~~s~~~l~-~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~ 231 (574)
+...++..+- .++.|+.|.++|+ +.+||+++.+..+++.++...+.+.... ......++.+++..+...+.+.
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~----~~~Rk~~l~~~~~~~~~~~~~l~~v~~~--~~~~~~~l~iia~v~~~~~~vf 146 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADY----GGRRKRFLLIFTLLGVLATALLWFVSPG--QWWLALVLFIIANVGYEASNVF 146 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc----cccchHHHHHHHHHHHHHHHHHHHhCcc--hHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555543 3458999999997 4588888888888877777777776433 2344455677788899999999
Q ss_pred HHHHHHhhhcccCc--------------------------cchHHHHHHHHHHHHHHHHHHHHHhhcc--------CChh
Q 008185 232 KDALVAEYGQKNGI--------------------------VGLQSYAFMAAASGGILGNLFGGYFLLK--------TPPT 277 (574)
Q Consensus 232 ~~a~i~d~~~~~~r--------------------------g~~~s~~~~~~~~G~~igp~igg~l~~~--------~gwr 277 (574)
.++++.|+.+++.+ ++..+..+....+|.++.-++.-.+... ..-|
T Consensus 147 yna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r 226 (477)
T PF11700_consen 147 YNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIR 226 (477)
T ss_pred HHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhh
Confidence 99999999988766 8888888888888988877776554321 2358
Q ss_pred HHHHHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccc
Q 008185 278 TMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSG 356 (574)
Q Consensus 278 ~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~ 356 (574)
..+.+.++..++..+.. +++||++.+...++.. .......++-.+.+++..+.|.+.+.++..++-.-.......
T Consensus 227 ~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~----~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~ 302 (477)
T PF11700_consen 227 VAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGS----SYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIIS 302 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcch----hHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888777775 5789886532211100 111122222223333334455555444332220111111222
Q ss_pred cceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcc
Q 008185 357 SMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLR--KLVGAVQILYASSLLLDLILVRQINLQFGVPNE 434 (574)
Q Consensus 357 ~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r--~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~ 434 (574)
....|..+++|++..+.....+...+..++|+++.+++.||++.| +++..+.++..+..+..+.-. .....+..+.
T Consensus 303 ~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~--~~~~~g~~~~ 380 (477)
T PF11700_consen 303 FAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGF--WPSFFGLKSP 380 (477)
T ss_pred HHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHh--hhcccCcccH
Confidence 223467788999999999999999999999999999999999999 777766655544333222100 0111122222
Q ss_pred eEEeehhHHHH-HHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHH
Q 008185 435 VFVLCFAGLAE-TLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVI 513 (574)
Q Consensus 435 ~~~l~~~~l~~-~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li 513 (574)
+-......+.+ +.+..+ ...-++.+++.|++++++.||+++...+.++.+||++.|.+.+..|- ....++.
T Consensus 381 ~~f~~~a~~~G~~~G~~q-s~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~-------~r~g~~~ 452 (477)
T PF11700_consen 381 WEFWVLAVLIGLFMGGIQ-SASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGS-------QRYGFLF 452 (477)
T ss_pred HHHHHHHHHHHHHhhhHH-HHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------chhHHHH
Confidence 21111111111 111111 11246789999999999999999999999999999999999998762 2344555
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHH
Q 008185 514 QFLAALLPLIWIHNVPMSETIIEK 537 (574)
Q Consensus 514 ~~~~~ll~l~~~~~vp~~~~~~~~ 537 (574)
..++.+++++++.+++++|++.+.
T Consensus 453 l~~lf~~gl~ll~~v~~~~g~~~A 476 (477)
T PF11700_consen 453 LLVLFLIGLILLFFVDVEKGREDA 476 (477)
T ss_pred HHHHHHHHHHHHhhccchhhhhcc
Confidence 555666777788888887765543
No 82
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.87 E-value=4.1e-21 Score=200.97 Aligned_cols=331 Identities=9% Similarity=-0.024 Sum_probs=203.8
Q ss_pred hhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHH
Q 008185 135 LALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPN 213 (574)
Q Consensus 135 ~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 213 (574)
+..+.++++++|+|+.+.+++.+++.+++.+ .|++|+++||+ +||+.+.++.++..++..++++.+.+ ++.
T Consensus 22 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~~~~~~i~~~~~~~~~~~---~~~ 93 (366)
T TIGR00886 22 PLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-----GPRYTTTLSLLLLAIPCLWAGLAVQS---YSV 93 (366)
T ss_pred HhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-----CchHHHHHHHHHHHHHHHHHHHHhhh---HHH
Confidence 3344358888999999999999999998766 78899999985 56666777877777777766665412 566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhc----------cCChhHHHHH-
Q 008185 214 LMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLL----------KTPPTTMFLV- 282 (574)
Q Consensus 214 l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~----------~~gwr~~f~i- 282 (574)
+++.|++.+++.+.. ....+++.|..++++|+.++++......+|..+|+.+++.+.. ..+|||.|++
T Consensus 94 ~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~ 172 (366)
T TIGR00886 94 LLLLRLFIGIAGGSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIV 172 (366)
T ss_pred HHHHHHHHHHhchhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHH
Confidence 778899888776544 4457889999999999999998887777777777777766553 3489999944
Q ss_pred HHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceee
Q 008185 283 FAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCY 361 (574)
Q Consensus 283 ~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~ 361 (574)
.+++..+..++. ++.+|++....+.++.+.++.. ....++..++.++.+++|.++...+..++.+..........+.|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (366)
T TIGR00886 173 PAGILLLPALLIFFVGADTPPGKPATGKLSFKGAR-WSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMF 251 (366)
T ss_pred HHHHHHHHHHHHHHhcccCCcccccchhccccccc-ccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 455554444443 4566654322111100000000 00001111234456777777665554443233222333445567
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
..+.+|+++.+.++......++.+++..+.+++.+|+++|+....+.++...+.... .+....+ .+........
T Consensus 252 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~ 325 (366)
T TIGR00886 252 FKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLV-VLGLVSP-----LSLAVFIVLF 325 (366)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHH-HhcCCCc-----chHHHHHHHH
Confidence 778899999999988777777888888888999999998877665544433322211 1110000 0111001111
Q ss_pred HHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhH
Q 008185 442 GLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLS 482 (574)
Q Consensus 442 ~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg 482 (574)
.+.....+....+...+..+..| +.+|+++|+.+++.++|
T Consensus 326 ~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 326 VALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 11111112222233445566666 68999999999888775
No 83
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.87 E-value=1.9e-20 Score=198.91 Aligned_cols=355 Identities=12% Similarity=0.077 Sum_probs=206.4
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
+...+++..... ...+.++.++++++|.++.+.+++.+++.+...+ +|++|+++||+ +||+.++.+....++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-----grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 7 FGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-----GLKKHLLWIISGLLVL 81 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHHHHHHHHHH
Confidence 334444444432 4445556688888999999999999999998765 89999999995 3444444333332222
Q ss_pred HHH---hhcccCc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008185 198 WGP---LALFPVA-AKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLK 273 (574)
Q Consensus 198 ~~~---~~~~~~~-~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~ 273 (574)
... ....+.. ......+++.+++.+++.+.......++..|..+ +++..++......++|.++||.++|.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~- 158 (396)
T TIGR00882 82 FAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS- 158 (396)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc-
Confidence 221 1111100 0011222344555556555555555566666533 23445566677778999999999998765
Q ss_pred CChhHHHHHHHHHHHHHHHHhhh-cccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcc
Q 008185 274 TPPTTMFLVFAVLLSLQLAISFS-AREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVP 352 (574)
Q Consensus 274 ~gwr~~f~i~ai~~~~~~~~~~~-lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~ 352 (574)
.+||+.|++.+++.++..++.++ .||++.+....++ ..+ +.. ++..++.++.+++|.++...++.+.......
T Consensus 159 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~----~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~ 232 (396)
T TIGR00882 159 IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVANA-LGA-NAS----AFSLKLALELFRQRKFWMFVLYVVGVACVYD 232 (396)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcc-ccc-ccC----CCCHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 59999999998888776655544 4443221110000 000 000 1112344566788887665544433221111
Q ss_pred cccccceeehcccc---CCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhccc
Q 008185 353 VLSGSMFCYQTQCL---NINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQF 429 (574)
Q Consensus 353 ~~~~~~~~~~~~~~---g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~ 429 (574)
.....++.|..+.+ +.+....|.......+...++....+++.||+++|+++.++.++.++.... ....
T Consensus 233 ~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~-~~~~------- 304 (396)
T TIGR00882 233 VFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIG-SSFA------- 304 (396)
T ss_pred HHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHhc-------
Confidence 12222333444433 555667788777777777778888899999999999887776655543221 1111
Q ss_pred CcCcceEEeehhHHHHHHHH-hhHHHHHHHHHhhcCCChhHHHHHH-HHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 430 GVPNEVFVLCFAGLAETLAQ-FKLLPFSMLLARLCPQGCEGSLTSF-SASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 430 ~~~~~~~~l~~~~l~~~~~~-~~~~p~~~l~~~~~p~~~~gt~~gl-~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
.+.+.... ..+..+.+. ........+..+..|++.+++.++. ++...++|+.+++.++|.+.+..|+
T Consensus 305 --~~~~~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~ 373 (396)
T TIGR00882 305 --TTALEVVI-LKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGF 373 (396)
T ss_pred --CChHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhccc
Confidence 11111111 111112221 1111122345667788888887776 6788899999999999999998774
No 84
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.87 E-value=5.1e-20 Score=197.11 Aligned_cols=334 Identities=11% Similarity=-0.005 Sum_probs=199.4
Q ss_pred chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccch
Q 008185 132 FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKA 210 (574)
Q Consensus 132 ~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~ 210 (574)
+..+++..++++++|++.+++|++.+++.++..+ +|++|.++||+ | |||+.+.++.+...++..+..+.. +
T Consensus 20 ~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~---g-~~r~~~~~~~~~~~~~~~~~~~~~-~--- 91 (418)
T TIGR00889 20 SWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW---L-SAQKVYAVCHFAGALLLFFAAQVT-T--- 91 (418)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c-ccHHHHHHHHHHHHHHHHHHHHhc-C---
Confidence 4556666788888999999999999999988765 88999999985 3 566676666666655555544442 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH----H----hhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHH
Q 008185 211 LPNLMACVLLSNLGASITEVAKDALV----A----EYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLV 282 (574)
Q Consensus 211 ~~~l~~~~~l~~~g~~~~~~~~~a~i----~----d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i 282 (574)
+..+++.|++.+++.+......+++. . |..+...|.+.++ .+|.++||.++|.+....+|+ .|++
T Consensus 92 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~ 164 (418)
T TIGR00889 92 PAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYI 164 (418)
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHH
Confidence 45556677766655443333333332 2 3222233444444 468888898988774333354 4666
Q ss_pred HHHHHHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHH-HHHHHHHcchhhHHHHHHHHhHhhhcccccccceee
Q 008185 283 FAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQF-SDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCY 361 (574)
Q Consensus 283 ~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~ 361 (574)
.++..++..+..+++||++....+++ .+ .++.. ......+++|.++...+..++...........++.+
T Consensus 165 ~~~~~~~~~~~~~~~~e~~~~~~~~~------~~----~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (418)
T TIGR00889 165 TAGSSALLGVFALTLPDIPVAKSTAK------MS----IKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGF 234 (418)
T ss_pred HHHHHHHHHHHHhcCCCCCCCccccc------cC----HHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHH
Confidence 66666655555567888743211100 00 11111 122345788877655544443211111111111222
Q ss_pred hccccCCC--------chhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCc
Q 008185 362 QTQCLNIN--------PSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPN 433 (574)
Q Consensus 362 ~~~~~g~s--------~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~ 433 (574)
.. ..|.+ ....|+......++.+++....+++.||+++|+++..+.++..+...... .... ...
T Consensus 235 ~~-~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~-~~~~------~~~ 306 (418)
T TIGR00889 235 LH-EFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFA-YGDP------EYF 306 (418)
T ss_pred HH-HhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH-HcCc------chh
Confidence 32 34433 35668888888888888889999999999999998888776655432211 1000 000
Q ss_pred ceEEeehhHHHHHHHHhhHHH-HHHHHHhhcCCChhHHHHHHHH-HHHHhHHHHHHHHHHHHHHhhC
Q 008185 434 EVFVLCFAGLAETLAQFKLLP-FSMLLARLCPQGCEGSLTSFSA-SALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 434 ~~~~l~~~~l~~~~~~~~~~p-~~~l~~~~~p~~~~gt~~gl~~-~~~~lg~~lg~~i~g~l~~~~g 498 (574)
.+..+....+..+++.....+ ...+++|..|++.+|+++|+.+ ....+|..+||.++|.+.+..|
T Consensus 307 ~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g 373 (418)
T TIGR00889 307 GYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMF 373 (418)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 011111111222222222223 3567889999999999999997 5678999999999999999876
No 85
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.87 E-value=6.9e-20 Score=194.60 Aligned_cols=383 Identities=19% Similarity=0.137 Sum_probs=248.2
Q ss_pred HhcC--CChhHHHH----HHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHH
Q 008185 143 HNLS--LHPSTLQL----VQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLM 215 (574)
Q Consensus 143 ~~~~--~s~~~~~l----~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 215 (574)
+.+| ++..+..+ ..+++.++.++ ..+.|+++|++ +||..+.+..++..++..+..+.. ....+..++
T Consensus 47 ~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~-----GRK~~l~~~~~l~~~~~~~~~~s~-~~~~~e~li 120 (485)
T KOG0569|consen 47 ERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRF-----GRKNALLLSNLLAVLAALLMGLSK-SAPSFEMLI 120 (485)
T ss_pred HhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cchHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHH
Confidence 3455 45555444 45556666666 45689999984 677766666665555444333332 122367788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHH--hhccCChhHHHHHHHHHHHHHHHH
Q 008185 216 ACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGY--FLLKTPPTTMFLVFAVLLSLQLAI 293 (574)
Q Consensus 216 ~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~--l~~~~gwr~~f~i~ai~~~~~~~~ 293 (574)
+.|++.|+..+.......-++.|.+|++.||.+-.+...+..+|.++|..+|.- +-....|++.+.+.++..++.+++
T Consensus 121 ~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~ 200 (485)
T KOG0569|consen 121 LGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLAL 200 (485)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHH
Confidence 999999999999988889999999999999998888888888888888666542 223456999999998888888887
Q ss_pred hhhcccccccccc-cchhcchhh------------hhhhh----HH-H-----HHHHHHHHHcchhhHHHHHHHHhHhhh
Q 008185 294 SFSAREESLGLAQ-VSYQNVASK------------SIAQS----IK-K-----QFSDLIATIGEESISYPLTWLVASVAM 350 (574)
Q Consensus 294 ~~~lpEt~~~~~~-~~~~~~~~~------------~~~~~----~~-~-----~~~~~~~~~~~~~v~~~~l~~~l~~~~ 350 (574)
..++||+|+.... +.+++.+++ ...+. .+ + .-..+++++++|...++....+. ...
T Consensus 201 l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~-v~~ 279 (485)
T KOG0569|consen 201 LPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIV-VSF 279 (485)
T ss_pred HhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHH-HHH
Confidence 8899999987643 221111100 00000 00 0 11135567788777665433322 122
Q ss_pred cccccc--cceeehc---cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhh
Q 008185 351 VPVLSG--SMFCYQT---QCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQI 425 (574)
Q Consensus 351 ~~~~~~--~~~~~~~---~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~ 425 (574)
.+++.+ +..+|.+ ...|++..+.-++..+.++..++.+.+...+.+|.|||++++.+..++.+..++......-.
T Consensus 280 ~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~ 359 (485)
T KOG0569|consen 280 AQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLS 359 (485)
T ss_pred HHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222 2233333 34789998888888888888999999999999999999999988877766655433222111
Q ss_pred hcccCcCcceE-EeehhHHHHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCC
Q 008185 426 NLQFGVPNEVF-VLCFAGLAETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGD 503 (574)
Q Consensus 426 ~~~~~~~~~~~-~l~~~~l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~ 503 (574)
+ ..+ +...+ .+....++....++...|. .-+.+|++|++.|.++++...++..++..+-......+.+.+|.
T Consensus 360 ~-~~~-~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~---- 433 (485)
T KOG0569|consen 360 N-SFG-SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP---- 433 (485)
T ss_pred H-Hhh-hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----
Confidence 1 010 10111 1222222333334444555 35678999999999999999999999988877777777777762
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhcC
Q 008185 504 YSSLPVGIVIQFLAALLPLIWIHNVPMSETIIEKGRKRG 542 (574)
Q Consensus 504 ~~~l~~~~li~~~~~ll~l~~~~~vp~~~~~~~~~~~~~ 542 (574)
+.++++.....+..+..++.+||||+++-+|..+.
T Consensus 434 ----~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~ 468 (485)
T KOG0569|consen 434 ----YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEE 468 (485)
T ss_pred ----hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHH
Confidence 33444444444455556789999999886655444
No 86
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.87 E-value=8.8e-20 Score=200.94 Aligned_cols=415 Identities=16% Similarity=0.078 Sum_probs=253.2
Q ss_pred ccccccCCcCCCCCCcccccccccccccccchhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhh
Q 008185 83 KESKRLGSWAGGGGDEERRRDFGEVGINNFNKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNL 161 (574)
Q Consensus 83 ~~~~~~v~w~~~~d~~np~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l 161 (574)
.+++..+.|+.++||++|. +|.... |+......+...+.....+ ......+ .+.++.+.....+..+++.+
T Consensus 58 ~~~~c~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~s~~~~---~~~~c~~~~~~~~~~s~~~~ 129 (521)
T KOG0255|consen 58 AEDSCLVYWDPTLDPANPL-NWPSWK----KWLLVIVICLDGWVYDYGSSVYSIVSE---WNLVCDSSTLVALGQSLFFL 129 (521)
T ss_pred CcccceecccCccCcCCcc-cccccc----ccccccccccceeEecCCCCcccccch---hceeeCcHhHHHHHHHHHHH
Confidence 4445556777888999998 555444 5554443444433333333 2222222 34577888999999999999
Q ss_pred hhhhhh-hheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008185 162 PMVAKP-LYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYG 240 (574)
Q Consensus 162 ~~~~~p-l~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~ 240 (574)
+..++| ++|++||++ +||+.++++.++.+++.++.+++++ ++.++++|++.+++.+.......+++.|+.
T Consensus 130 G~~vG~~i~g~lsD~~-----GRk~~~~~~~~~~~i~~~~~a~a~~----~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~ 200 (521)
T KOG0255|consen 130 GVLVGSLIFGPLSDRF-----GRKPVLLVSLLLFIIFGILTAFAPN----YWMFLIFRFLSGFFGSGPLTVGFGLVAEIV 200 (521)
T ss_pred HHHHHHhhheehHhhc-----ccHHHHHHHHHHHHHHHHHHHHhCc----HHHHHHHHHHHHhhccchhHHhHhhheeec
Confidence 999988 589999984 6888888888888888877777754 788899999999999888888889999999
Q ss_pred cccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHhhhcccccccccccchhcch-----h-
Q 008185 241 QKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVA-----S- 314 (574)
Q Consensus 241 ~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~-----~- 314 (574)
.+++|+.++++ ......|+.++|..++++.. +|||.+|+..+..++.++..++.||++++...+++.+.+ +
T Consensus 201 ~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~ 277 (521)
T KOG0255|consen 201 SPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKI 277 (521)
T ss_pred CcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHH
Confidence 99999999998 77888999999999999987 899999999998887777766677998876532221110 0
Q ss_pred -------hhhhhhHHHH--HH-----------HHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHH
Q 008185 315 -------KSIAQSIKKQ--FS-----------DLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIG 374 (574)
Q Consensus 315 -------~~~~~~~~~~--~~-----------~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~g 374 (574)
....+..+.. .+ .+..+++.|.+....++..+.+...-....... +....+|-+ ..
T Consensus 278 a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~-~~~~~lg~~---~~ 353 (521)
T KOG0255|consen 278 AKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLS-LNVSGLGGN---IY 353 (521)
T ss_pred HhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhh-hhhhhcCch---HH
Confidence 0000001110 00 122334444333333333332211100000000 111223322 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHH
Q 008185 375 MSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLP 454 (574)
Q Consensus 375 l~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p 454 (574)
+.....+.....+....+...++.+||.....+..+..++.+...+..... ..+.......+..+..+..+..
T Consensus 354 ~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 426 (521)
T KOG0255|consen 354 LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDL-------GGWLHWILPLLGKFFIGSAFNL 426 (521)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccc-------hhHHHHHHHHHHHHHHHHHHHH
Confidence 223333334445555556777888888877777666555544332221110 0001111122222222333444
Q ss_pred HHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHHHHHHhcCCCHHH
Q 008185 455 FSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLPLIWIHNVPMSETI 534 (574)
Q Consensus 455 ~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l~~~~~vp~~~~~ 534 (574)
...+.+|+.|...|+.+.+..+....+|..++|.+....... . ..+... ++..+..+.+++...++||+++.
T Consensus 427 ~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~-~------~~~~~~-~~~~~~~l~~~~~~~~lpet~~~ 498 (521)
T KOG0255|consen 427 IFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQM-F------PLLGLI-LFGWLALLLGLLSLLLLPETKGK 498 (521)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c------ccchHH-HHHHHHHHHHHHHHhcCcccCCC
Confidence 456788999999999999999999999999998876544331 1 111222 22333333444445889999885
Q ss_pred HH
Q 008185 535 IE 536 (574)
Q Consensus 535 ~~ 536 (574)
.+
T Consensus 499 ~l 500 (521)
T KOG0255|consen 499 PL 500 (521)
T ss_pred CC
Confidence 54
No 87
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.86 E-value=2e-22 Score=207.28 Aligned_cols=369 Identities=17% Similarity=0.131 Sum_probs=233.6
Q ss_pred hhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhh-hhhhheeeccccccCCCccchhHhHHH
Q 008185 114 KQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMV-AKPLYGILSDALYIGGAHRIPYICIGV 191 (574)
Q Consensus 114 ~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~-~~pl~G~lsD~~~~~G~rRk~~l~i~~ 191 (574)
+...+++++..+...++- ...... .-+++.||+++...|++.+.+.+.+. +.|++|.|+|| |.||.++.+|.
T Consensus 32 ~~~l~il~~vnlmny~Dr~~iagv~-~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadr-----yNR~~v~~vG~ 105 (493)
T KOG1330|consen 32 TLTLVILCLVNLMNYADRYTIAGVL-KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADR-----YNRKRVIAVGI 105 (493)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhhhh-HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhh-----cCcceEEeeHH
Confidence 334444666677777764 333333 35788899999999999999998875 49999999998 58999999999
Q ss_pred HHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhh
Q 008185 192 FLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFL 271 (574)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~ 271 (574)
.+..++.++.++.. .+++++++|.+.++|-+...+..+++++|.++.++|++++++++.+..+|..+|-+.|+.+.
T Consensus 106 ~iW~~Av~~~~fs~----~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va 181 (493)
T KOG1330|consen 106 FIWTLAVFASGFSN----HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVA 181 (493)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeec
Confidence 99888888777763 27889999999999999999999999999999999999999999999999999999999888
Q ss_pred ccCC-hhHHHHHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHH-HHHhHh
Q 008185 272 LKTP-PTTMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLT-WLVASV 348 (574)
Q Consensus 272 ~~~g-wr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l-~~~l~~ 348 (574)
...+ |||.|++.+++++++.++. ++++|+++....+ .+...+. ..+....+++++.+.++|.+....+ +... .
T Consensus 182 ~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~--~~~~~~~-~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~-~ 257 (493)
T KOG1330|consen 182 SLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDE--VDGENKM-VKPFTSVWKDLKVLAKIKVFVLSSLGIIAA-Q 257 (493)
T ss_pred cCccceEEEEEeehHHHHHHHHHHHhhccCcccccccc--cccCCcC-CCCccchHHHHHHHHccCceeeehHHHHHH-H
Confidence 7666 9999999999999988885 5788866432211 0000000 0112233456666566554432222 2222 1
Q ss_pred hhcccccc---cceeehccccCCCc----hhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHh---HH
Q 008185 349 AMVPVLSG---SMFCYQTQCLNINP----SVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLL---LD 418 (574)
Q Consensus 349 ~~~~~~~~---~~~~~~~~~~g~s~----~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l---~~ 418 (574)
+....+.. .+.++..+..|++. ...|+.-..+.+|.+.|+.+.+++.+.++.........+..+.... ..
T Consensus 258 fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~ 337 (493)
T KOG1330|consen 258 FVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPF 337 (493)
T ss_pred HhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHH
Confidence 11111111 11122223344432 2334446667788889999999887755442222233322222211 11
Q ss_pred HHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHh-HHHHHHHHHHHHHHhh
Q 008185 419 LILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCL-SSIASGFLGVGLASLT 497 (574)
Q Consensus 419 l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~l-g~~lg~~i~g~l~~~~ 497 (574)
+.+..... ....++.+....+...+.....-+..-+..++.|++.|.+++++...+.-+ |.+-+|.+.|++.+.+
T Consensus 338 L~~~~~~~----~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 338 LFLFPAFT----SSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred HHHHHhhh----hHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHh
Confidence 11111100 001111111111111111111111123456788999999999999988764 5556676888888854
Q ss_pred -Ccc
Q 008185 498 -GIT 500 (574)
Q Consensus 498 -g~~ 500 (574)
|+.
T Consensus 414 ~g~~ 417 (493)
T KOG1330|consen 414 RGYK 417 (493)
T ss_pred hCCC
Confidence 554
No 88
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.85 E-value=5.8e-19 Score=193.94 Aligned_cols=374 Identities=15% Similarity=0.063 Sum_probs=224.8
Q ss_pred HHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHH
Q 008185 151 TLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITE 229 (574)
Q Consensus 151 ~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~ 229 (574)
+.+++.+...++..+ .++.|+++|++ +||..++++.++..+.+++.+++.+ ..+++++|++.++|.+...
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-----GRk~~l~~~~~~~~iG~ii~~~a~~----~~~l~~GR~l~G~g~G~~~ 160 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-----GRKKTLLLAVVLFLIGAIIIALAPS----WYQLIVGRILTGLGVGGAS 160 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHHhccchhhhh
Confidence 458888888887655 78899999985 6888888888888999988888763 6788999999999999998
Q ss_pred HHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhcc--CChhHHHHHHHHHHHHHHHHhhhccccccccccc
Q 008185 230 VAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLK--TPPTTMFLVFAVLLSLQLAISFSAREESLGLAQV 307 (574)
Q Consensus 230 ~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~--~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~ 307 (574)
...+.+++|+.|++.||...+..+....+|..+|.+++ ...++ .+||..+++.++.+++..+..+++||++++..+.
T Consensus 161 ~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~-~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~ 239 (513)
T KOG0254|consen 161 VLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCIN-YGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEK 239 (513)
T ss_pred hcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHh-hhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHc
Confidence 88999999999999999999999999999999995554 44444 4899999999888887777767899999876543
Q ss_pred chhcch--------h---hh---hhhhHH-HHHHH--------HHHHHcchhhHHHHHHHHhHhhhcccc--cccceeeh
Q 008185 308 SYQNVA--------S---KS---IAQSIK-KQFSD--------LIATIGEESISYPLTWLVASVAMVPVL--SGSMFCYQ 362 (574)
Q Consensus 308 ~~~~~~--------~---~~---~~~~~~-~~~~~--------~~~~~~~~~v~~~~l~~~l~~~~~~~~--~~~~~~~~ 362 (574)
.+...+ . .+ ..+..+ +...+ .+.-+..|...+....... ....+++ .....+|.
T Consensus 240 g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~-l~~fqq~tG~~~~~~Y~ 318 (513)
T KOG0254|consen 240 GRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLL-LQLFQQLTGINYVFYYS 318 (513)
T ss_pred CChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHH-HHHHHHHhCCceEEeeh
Confidence 211110 0 00 000011 00000 0111222334333322211 1111111 11222333
Q ss_pred c---cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccC-cC--cceE
Q 008185 363 T---QCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFG-VP--NEVF 436 (574)
Q Consensus 363 ~---~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~-~~--~~~~ 436 (574)
. +..|++... ....+..++..++++.+...+.||.++|++++.+...+.++.++.. .......... .. ..++
T Consensus 319 ~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 396 (513)
T KOG0254|consen 319 TTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILA-VVGVFALYYPNSSKGAGWL 396 (513)
T ss_pred HHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHH-HHHHHhccCCCcccchhHH
Confidence 2 234544322 2233333344444444456677888999999988877766655332 2211110000 00 1111
Q ss_pred EeehhHHHHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHH
Q 008185 437 VLCFAGLAETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQF 515 (574)
Q Consensus 437 ~l~~~~l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~ 515 (574)
.+....++.........|. +.+.+|+.|.+.|+++.++...+..+...+-....-.+.+..+ . ...+..+.+
T Consensus 397 ~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~-----~--~~~f~~f~~ 469 (513)
T KOG0254|consen 397 AIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG-----I--GGTFGYFGG 469 (513)
T ss_pred HHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-----c--cchHHHHHH
Confidence 2222222222222333333 3567999999999999999888887766443333323333222 0 122333444
Q ss_pred HHHHHHH-HHHHhcCCCHHHHHHHHhcCCC
Q 008185 516 LAALLPL-IWIHNVPMSETIIEKGRKRGLS 544 (574)
Q Consensus 516 ~~~ll~l-~~~~~vp~~~~~~~~~~~~~~~ 544 (574)
+..+..+ +.++++|||+++++||.++...
T Consensus 470 ~~~~~~~~fv~~~~pETkg~sleei~~~~~ 499 (513)
T KOG0254|consen 470 ICLLSLIIFVFFFVPETKGLTLEEINELFE 499 (513)
T ss_pred HHHHHHHHHheEEcccCCCCcHHHHHHHHH
Confidence 4444444 4578999999999998876543
No 89
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.85 E-value=1.2e-19 Score=189.67 Aligned_cols=320 Identities=14% Similarity=0.057 Sum_probs=205.9
Q ss_pred HHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHH
Q 008185 140 HMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACV 218 (574)
Q Consensus 140 ~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 218 (574)
.+++++|++.++.++..+++.+++.+ .|+.|+++||+ +||+.+.++.+...++.... .. ++ ...+++.|
T Consensus 25 ~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~~~~~~~~~~~~-~~-~~---~~~l~~~~ 94 (355)
T TIGR00896 25 QIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-----GEERSVAAGLLLIAAGILIR-SA-PG---TALLFAGT 94 (355)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-----CchHHHHHHHHHHHHHHHHH-Hh-cc---HHHHHHHH
Confidence 56778999999999999999998866 78899999985 46666666666655555443 32 22 45667889
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccC--ChhHHHHHHHHHHHHHHHHhhh
Q 008185 219 LLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKT--PPTTMFLVFAVLLSLQLAISFS 296 (574)
Q Consensus 219 ~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~--gwr~~f~i~ai~~~~~~~~~~~ 296 (574)
++.++|.+.........+.|..+ ++|++++++.+.+..+|..+|+.+++.+.+.. +||+.|.+.++..++.. ..+
T Consensus 95 ~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~--~~~ 171 (355)
T TIGR00896 95 ALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL--LAW 171 (355)
T ss_pred HHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH--HHH
Confidence 99888888776666667777765 68999999999999999999999999887654 39999987765443322 233
Q ss_pred cccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHH
Q 008185 297 AREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMS 376 (574)
Q Consensus 297 lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~ 376 (574)
+||.+....+.. .... ...++.+++|.++...+..++...........++.|.++ +|+++.+.|..
T Consensus 172 ~~~~~~~~~~~~------~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~ 237 (355)
T TIGR00896 172 IPQVRRRVAANQ------TTTR-------LTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSL 237 (355)
T ss_pred hhhhccccCCCC------CCCC-------CCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHH
Confidence 454332111000 0000 012234566766655443333222222222334445554 79999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHH
Q 008185 377 RVIGQSMLLSLTVFYDRYWKKVP-LRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPF 455 (574)
Q Consensus 377 ~i~~~ig~lig~~l~~~l~~r~~-~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~ 455 (574)
.....++.+++..+.+++.||++ +|+.+..+.++.+++.+. +..... +... . ...+. +++.....|.
T Consensus 238 ~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------~~~~-~-~~~l~-g~~~g~~~~~ 305 (355)
T TIGR00896 238 LALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCG-LLFAPM--------HGLW-A-WALVL-GLGQGGAFPL 305 (355)
T ss_pred HHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHH-HHHhhh--------hHHH-H-HHHHH-HHhhhhHhHH
Confidence 88899999999999999999995 444444444444333221 111110 0000 0 11111 2222233333
Q ss_pred -HHHHHhhc-CCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Q 008185 456 -SMLLARLC-PQGCEGSLTSFSASALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 456 -~~l~~~~~-p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g 498 (574)
.....+.. +++.+|+.+++.+++.+++..++|.+.|.+.+..|
T Consensus 306 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 306 ALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33344333 45677999999999999999999999999999876
No 90
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.84 E-value=5.6e-18 Score=181.87 Aligned_cols=388 Identities=17% Similarity=0.130 Sum_probs=219.5
Q ss_pred hhhHHHHHHhcCCChhHHHHHHHHhhhh-hhhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCcc-----
Q 008185 135 LALNFHMAHNLSLHPSTLQLVQNSGNLP-MVAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAA----- 208 (574)
Q Consensus 135 ~~~~~~l~~~~~~s~~~~~l~~s~~~l~-~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~----- 208 (574)
..+++++ +++|++....+++..+..+. ...+|++|.+|||...+.+|||++++.+.+..++++.++.+..+..
T Consensus 25 ~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~ 103 (477)
T TIGR01301 25 SLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGD 103 (477)
T ss_pred HHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccc
Confidence 3344455 45999999999998888765 4569999999997555445888888777777777777666543210
Q ss_pred ------ch--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCc--cchHHHHHHHHHHHHHHHHHHHHHh--hcc---
Q 008185 209 ------KA--LPNLMACVLLSNLGASITEVAKDALVAEYGQKNGI--VGLQSYAFMAAASGGILGNLFGGYF--LLK--- 273 (574)
Q Consensus 209 ------~~--~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~r--g~~~s~~~~~~~~G~~igp~igg~l--~~~--- 273 (574)
.. ....++...+..++......+..++++|+.++++| +.+.++......+|.++|+.+|++. .+.
T Consensus 104 ~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~ 183 (477)
T TIGR01301 104 NLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPF 183 (477)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccc
Confidence 00 01122223334456666666778999999998654 5678888888899999999999875 211
Q ss_pred ----------CChhHHHHHHHHHHHHHHHHh-hhcccccccccccch-hcchhhhhhhhHHHHHHHHHHHHc--chhhHH
Q 008185 274 ----------TPPTTMFLVFAVLLSLQLAIS-FSAREESLGLAQVSY-QNVASKSIAQSIKKQFSDLIATIG--EESISY 339 (574)
Q Consensus 274 ----------~gwr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~ 339 (574)
.+.|+.|++.+++.++..++. +++||++....+... ++.++.+ ....+..++++++.++ -|..++
T Consensus 184 ~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~mP~~m~~ 262 (477)
T TIGR01301 184 TKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPS-KHGEEAFFGELFGAFKYLPRPVWI 262 (477)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhccccc-ccchhhhHHHHHHHHHHCCHHHHH
Confidence 157899999888777777664 679997542211100 0000000 0001112223222222 244555
Q ss_pred HHHHHHhHhhhcccccccc-eeehccccCCCch------h---HHH-HHHHHHHHHHHHHHHHHHHHhcCCch-hHHHHH
Q 008185 340 PLTWLVASVAMVPVLSGSM-FCYQTQCLNINPS------V---IGM-SRVIGQSMLLSLTVFYDRYWKKVPLR-KLVGAV 407 (574)
Q Consensus 340 ~~l~~~l~~~~~~~~~~~~-~~~~~~~~g~s~~------~---~gl-~~i~~~ig~lig~~l~~~l~~r~~~r-~ll~~~ 407 (574)
+++..+++|.....+.... .++-.++|+-++. + .|. ..+...+.+.+..++..++.|+++.| +....+
T Consensus 263 l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s 342 (477)
T TIGR01301 263 LLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIV 342 (477)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Confidence 5555565554322111100 1112234443221 1 122 24444555556667788899999864 444555
Q ss_pred HHHHHHHHhHHHHhhhhhhc---c------cCcCcc---eEEeeh-hHHHHHHHHhhHHHHHHHHHhhcCC--ChhHHHH
Q 008185 408 QILYASSLLLDLILVRQINL---Q------FGVPNE---VFVLCF-AGLAETLAQFKLLPFSMLLARLCPQ--GCEGSLT 472 (574)
Q Consensus 408 ~ll~~~~~l~~l~l~~~~~~---~------~~~~~~---~~~l~~-~~l~~~~~~~~~~p~~~l~~~~~p~--~~~gt~~ 472 (574)
.++.+++.... .+...... . ...++. +..++. ..+....+....+|+ +++++..++ +..|..+
T Consensus 343 ~~~~~~~l~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPf-al~s~~~~~~~~~~G~~m 420 (477)
T TIGR01301 343 NIILAICLAAT-VLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPF-ALASIRSSNLGAGQGLSM 420 (477)
T ss_pred HHHHHHHHHHH-HHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhH-HHHHHHccccCCCCcchh
Confidence 55554443332 22221000 0 000110 111111 111111223455665 455666664 5569999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHHH-HHHhcCCCH
Q 008185 473 SFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLPLI-WIHNVPMSE 532 (574)
Q Consensus 473 gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l~-~~~~vp~~~ 532 (574)
|+.|++..+.+.+.++..|.+.+.+|-+ + ...+.++++..+++.+ .++.+|+.+
T Consensus 421 gilN~~I~lpQii~sl~~g~~~~~~g~~-----~-~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 421 GVLNLAIVIPQIIVSLGSGPWDQLFGGG-----N-LPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCCC-----C-eeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999998888877777732 1 2345555555555444 467888764
No 91
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.84 E-value=2.4e-18 Score=187.05 Aligned_cols=366 Identities=13% Similarity=0.052 Sum_probs=211.0
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHh--cCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHN--LSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQI 195 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~--~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~ 195 (574)
+.+..++..+.. .....++.|++++ +|.+..+++++.+.+.+...+ .++.|+++||+ .+||+.+.++.++..
T Consensus 15 l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~----~G~~~~l~~~~~~~~ 90 (475)
T TIGR00924 15 LFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRV----WGTKKTMVLGGIVLM 90 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhh----cchHHHHHHHHHHHH
Confidence 344445544443 3444456677877 999999999999999887655 66789999982 257777777888878
Q ss_pred HHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccC---ccchHHHHHHHHHHHHHHHHHHHHHhhc
Q 008185 196 LSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNG---IVGLQSYAFMAAASGGILGNLFGGYFLL 272 (574)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~---rg~~~s~~~~~~~~G~~igp~igg~l~~ 272 (574)
++..+++..++ ...+++.+++.++|.+...+...++++|..++++ |+.+.++.+.+.++|.++||.+++++.+
T Consensus 91 ~g~~~~~~~~~----~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~ 166 (475)
T TIGR00924 91 LGHFMLAMSIY----PDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAE 166 (475)
T ss_pred HHHHHHHhccc----HhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHH
Confidence 77777766542 3445667878788877766677788999987643 8888999999999999999999999998
Q ss_pred cCChhHHHHHHHHHHHHHHHHhhhcccccccc----cccchhcchh-hhhh-------hhHHH-----------------
Q 008185 273 KTPPTTMFLVFAVLLSLQLAISFSAREESLGL----AQVSYQNVAS-KSIA-------QSIKK----------------- 323 (574)
Q Consensus 273 ~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~----~~~~~~~~~~-~~~~-------~~~~~----------------- 323 (574)
..|||+.|++.++..++..+..++.++..++. ...++++.+. +... ...+.
T Consensus 167 ~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (475)
T TIGR00924 167 NYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTV 246 (475)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 88999999998755444433333333222110 0000000000 0000 00000
Q ss_pred -----------HHHH-HHHHHcch--hhHHHHHHHHhHhhhcccccccceeehccccCCCch----hHHHHHHHHHHHHH
Q 008185 324 -----------QFSD-LIATIGEE--SISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPS----VIGMSRVIGQSMLL 385 (574)
Q Consensus 324 -----------~~~~-~~~~~~~~--~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~----~~gl~~i~~~ig~l 385 (574)
..++ ....-+++ .+....+...+.+....+..+.++.+..+..+.+.. ..+++.....+..+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~ii 326 (475)
T TIGR00924 247 TLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVV 326 (475)
T ss_pred HHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHH
Confidence 0000 00000111 111111122222333333444444444443332211 24566666666666
Q ss_pred HHHHHHH----HHHhc-CCchhHH--HHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHH-HH
Q 008185 386 SLTVFYD----RYWKK-VPLRKLV--GAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPF-SM 457 (574)
Q Consensus 386 ig~~l~~----~l~~r-~~~r~ll--~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~-~~ 457 (574)
+..++.. ++.+| .+.+... .++.++.+++.+..... .. ...-..+...+.+....+..+++++...|. ..
T Consensus 327 l~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~-~~-~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~ 404 (475)
T TIGR00924 327 VGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAAS-IW-FADAGGLTSPWFMVLIYLFQTLGELMISPLGLS 404 (475)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH-Hh-hcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6655544 44443 2223322 45555555443332211 10 000011122222333445556777767675 67
Q ss_pred HHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 008185 458 LLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLAS 495 (574)
Q Consensus 458 l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~ 495 (574)
+..+.+|++.||+++|++.....+|..+++.+......
T Consensus 405 ~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~ 442 (475)
T TIGR00924 405 WWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAV 442 (475)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88999999999999999998888888887777665443
No 92
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.83 E-value=1.7e-17 Score=170.37 Aligned_cols=373 Identities=15% Similarity=0.115 Sum_probs=241.7
Q ss_pred HHHHhcCCChhHHHHHHHHhhhhhhhhhhheeeccccc-cCCCccchhHhHHHHHHHHHHHHhhcc----cC-----c-c
Q 008185 140 HMAHNLSLHPSTLQLVQNSGNLPMVAKPLYGILSDALY-IGGAHRIPYICIGVFLQILSWGPLALF----PV-----A-A 208 (574)
Q Consensus 140 ~l~~~~~~s~~~~~l~~s~~~l~~~~~pl~G~lsD~~~-~~G~rRk~~l~i~~~~~~~~~~~~~~~----~~-----~-~ 208 (574)
.|-.|+++.....+..+++..+-..++|.+|..||+.| .+|+||-||+..|.+.++....+.... .. + .
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 35567999999999888888776667888999999998 889999999998888766544333221 11 0 1
Q ss_pred chHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHH
Q 008185 209 KALPNL--MACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVL 286 (574)
Q Consensus 209 ~~~~~l--~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~ 286 (574)
...+.. .+.+.+.++|.+.+.....++++|..++++|+++.++.|....+|.+++.++.|.+.+.+...-..-+....
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 112222 223445688888888889999999999999999999999999999999999999988876644433333333
Q ss_pred HHHHHHH---hhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccce-eeh
Q 008185 287 LSLQLAI---SFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMF-CYQ 362 (574)
Q Consensus 287 ~~~~~~~---~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~-~~~ 362 (574)
+++..++ ..+=.|++.+..... ++....++++.++++ ..+|...+...++++ ....+...+... .|-
T Consensus 165 a~i~~~l~~ia~wg~E~r~~~~~~~-----~~~~~~~f~~a~~~~---~~~~~a~~f~~fl~l-~t~a~~~QD~iLEPyg 235 (403)
T PF03209_consen 165 ALIALLLNLIALWGQEPRRSRRAAA-----AERPRPPFREAWRQV---WASPQARRFFVFLFL-GTLAFFMQDVILEPYG 235 (403)
T ss_pred HHHHHHHHHHHHHhcccCCcccccC-----CCCCCccHHHHHHHH---HhCCChhHHHHHHHH-HHHHHHhhHHHcCCch
Confidence 3333332 333345443322100 011223445555544 367777777777666 222222222221 245
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh-cCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 363 TQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWK-KVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 363 ~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~-r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
.+++|+++.+..-+......|.++|..+.+++.. |.+.++.-.+++.+.+++... +.+... ..+.+......
T Consensus 236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~l-ii~a~~------~~~~~~~~~~~ 308 (403)
T PF03209_consen 236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFAL-IILAGP------LGSPWLFRPGV 308 (403)
T ss_pred hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHH-HHHHHh------cccchHHHHHH
Confidence 6789999999999988888899999888887765 566666666666655544332 222211 11222211222
Q ss_pred HHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccC--CCCChhHHHHHHHHHHH
Q 008185 442 GLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFG--DYSSLPVGIVIQFLAAL 519 (574)
Q Consensus 442 ~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~--~~~~l~~~~li~~~~~l 519 (574)
.++++..++........+.+++.++..|++.|.....+.++..++.+++|.+.|....-.+ ....+...+.+-+++.+
T Consensus 309 ~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~ 388 (403)
T PF03209_consen 309 FLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLL 388 (403)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHH
Confidence 2222223444555567788999999999999999999999999999999999986543222 22333445556666666
Q ss_pred HHHHHHHhc
Q 008185 520 LPLIWIHNV 528 (574)
Q Consensus 520 l~l~~~~~v 528 (574)
+++..+..+
T Consensus 389 ~a~~ll~~l 397 (403)
T PF03209_consen 389 AALVLLGRL 397 (403)
T ss_pred HHHHHHHHh
Confidence 666555444
No 93
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.83 E-value=3.3e-18 Score=182.58 Aligned_cols=344 Identities=10% Similarity=0.022 Sum_probs=214.1
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
++..++..++.. +..+..+ .+++++|++..+.+++.+.+.+++.+ .|+.|+++||+ +||+.+.++.++.+++
T Consensus 8 ~~~~f~~~G~~~~~~~~l~~-~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-----G~r~~~~~g~~l~~~g 81 (410)
T TIGR00885 8 ITSLFALWGFANDITNPMVP-QFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-----SYKAGILLGLFLYALG 81 (410)
T ss_pred HHHHHHHHHHHHHhHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CchHHHHHHHHHHHHH
Confidence 566667777765 4444444 56888999999999999999998866 78899999985 5777777787777777
Q ss_pred HHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhcc----
Q 008185 198 WGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLK---- 273 (574)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~---- 273 (574)
..+....... .+++.+++.|++.++|.+..+...+.++.+..++++|++.+++.+....+|..+||.+++.+...
T Consensus 82 ~~l~~~~~~~-~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~ 160 (410)
T TIGR00885 82 AFLFWPAAEI-MNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPH 160 (410)
T ss_pred HHHHHHHHhh-ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 6654333211 12667788899999999999888888899998888899999999999999999999999877532
Q ss_pred ----------------------CChhHHHHHHHHHHHHHHHHhhh--cccccccccccchhcchhhhhhhhHHHHHHHHH
Q 008185 274 ----------------------TPPTTMFLVFAVLLSLQLAISFS--AREESLGLAQVSYQNVASKSIAQSIKKQFSDLI 329 (574)
Q Consensus 274 ----------------------~gwr~~f~i~ai~~~~~~~~~~~--lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (574)
.+||++|++.+++.++..++..+ .||.+... .+ + +..++ +.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~--~~------~---~~~~~---~~~ 226 (410)
T TIGR00885 161 QSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHSD--AK------Q---ISFSA---SLS 226 (410)
T ss_pred chhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc--cc------c---ccchh---hHH
Confidence 36999999998877665544433 34321110 00 0 01111 122
Q ss_pred HHHcchhhHHHHHHHHhHhhhccc-ccccceeehcc-ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHH
Q 008185 330 ATIGEESISYPLTWLVASVAMVPV-LSGSMFCYQTQ-CLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAV 407 (574)
Q Consensus 330 ~~~~~~~v~~~~l~~~l~~~~~~~-~~~~~~~~~~~-~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~ 407 (574)
+.+++|.++...+..++ |..... ....++-|..+ ..+.+....+........+..+|..+.+++.+|.+.|+++.++
T Consensus 227 ~~~~~~~~~~~~l~~f~-yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~ 305 (410)
T TIGR00885 227 RLARIRHYREGVIAQFF-YVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAY 305 (410)
T ss_pred HHHhChhHHHHHHHHHH-HHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 34567776665544444 332221 11112223322 1233433334333334455667777778888888888887766
Q ss_pred HHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHH
Q 008185 408 QILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASG 487 (574)
Q Consensus 408 ~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~ 487 (574)
.++..++.++.. .. ++... +....+...+....+.....+..+..+++......++..+. +|+++.|
T Consensus 306 ~~~~~~~~ll~~-~~---------~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p 372 (410)
T TIGR00885 306 AIIGMALCLGSI-FA---------GGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVP 372 (410)
T ss_pred HHHHHHHHHHHH-Hc---------CChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHH
Confidence 665554433221 11 11110 11111111222233323356666777776654445554443 9999999
Q ss_pred HHHHHHHHhhC
Q 008185 488 FLGVGLASLTG 498 (574)
Q Consensus 488 ~i~g~l~~~~g 498 (574)
.+.|.+.|..|
T Consensus 373 ~l~G~~~d~~~ 383 (410)
T TIGR00885 373 PLQGFIIDMKE 383 (410)
T ss_pred HHHHHHHHHhc
Confidence 99999999654
No 94
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.83 E-value=3.4e-18 Score=186.17 Aligned_cols=364 Identities=9% Similarity=0.042 Sum_probs=205.9
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhh-hhhhhhhheeeccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNL-PMVAKPLYGILSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l-~~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
+++..+...+.. .....+..|+++++|++.++++++.+.+.. .+.+.|+.|+++||+ .+||+.++++.++..+.
T Consensus 19 ~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~----~G~r~~~~~g~~~~~~g 94 (489)
T PRK10207 19 IFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHL----LGTKRTIVLGAIVLAIG 94 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhc----cchHHHHHHHHHHHHHH
Confidence 445555555554 444445568888899999999999888875 556677899999982 35777777788877777
Q ss_pred HHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc--CccchHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008185 198 WGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKN--GIVGLQSYAFMAAASGGILGNLFGGYFLLKTP 275 (574)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~--~rg~~~s~~~~~~~~G~~igp~igg~l~~~~g 275 (574)
...+++..+. ...+++.|.++++|.+...+...++++|..|++ +|+.++++++.+.++|..+||.++|++.+..|
T Consensus 95 ~~~~~~~~~~---~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g 171 (489)
T PRK10207 95 YFMTGMSLLK---PDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG 171 (489)
T ss_pred HHHHHHhccc---hhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 7766665432 122446788888888877666678999999775 45778899999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhccccccccc-ccchhcchhhhh-----------------hh--hH--------------
Q 008185 276 PTTMFLVFAVLLSLQLAISFSAREESLGLA-QVSYQNVASKSI-----------------AQ--SI-------------- 321 (574)
Q Consensus 276 wr~~f~i~ai~~~~~~~~~~~lpEt~~~~~-~~~~~~~~~~~~-----------------~~--~~-------------- 321 (574)
||+.|++.++...+..+..++.++...... +.+++..+.... .+ ..
T Consensus 172 w~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (489)
T PRK10207 172 YSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTI 251 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 999999975533322222223332211100 000000000000 00 00
Q ss_pred ---HHHHHHHHHHHcchhhHHHHHH--HHhHhhhcccccccceeehccc-----cCCCchhHHHHHHHHHHHHHHHHHHH
Q 008185 322 ---KKQFSDLIATIGEESISYPLTW--LVASVAMVPVLSGSMFCYQTQC-----LNINPSVIGMSRVIGQSMLLSLTVFY 391 (574)
Q Consensus 322 ---~~~~~~~~~~~~~~~v~~~~l~--~~l~~~~~~~~~~~~~~~~~~~-----~g~s~~~~gl~~i~~~ig~lig~~l~ 391 (574)
.+. +...+.+++|.+....++ ..+.+....+....++.+.++. .|+.. ..........+..++..++.
T Consensus 252 ~f~~~~-~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i-~~~~~~~~n~~~iii~~pl~ 329 (489)
T PRK10207 252 IFFREA-FKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSI-NPVSFQALNPFWVVVASPIL 329 (489)
T ss_pred HHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEE-CHHHHHhHhHHHHHHHHHHH
Confidence 000 000122344433322222 1112233333334444444422 12221 11222233334454555556
Q ss_pred HHHHhcCCchh-------HHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHH-HHHHHhhc
Q 008185 392 DRYWKKVPLRK-------LVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPF-SMLLARLC 463 (574)
Q Consensus 392 ~~l~~r~~~r~-------ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~-~~l~~~~~ 463 (574)
+++.+|.++|+ .+.++.++.+++.+.......... ........+.+....+..++++....|. ..++.+.+
T Consensus 330 ~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~-~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~a 408 (489)
T PRK10207 330 AGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFA-DAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALV 408 (489)
T ss_pred HHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC
Confidence 66666666654 244555554443322111000000 0000111122223344455666555554 77888999
Q ss_pred CCChhHHHHHHHHHHHHhHHHHHHHHHHHH
Q 008185 464 PQGCEGSLTSFSASALCLSSIASGFLGVGL 493 (574)
Q Consensus 464 p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l 493 (574)
|++.+|.++|+++...++|+.+|..++...
T Consensus 409 P~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 409 PQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999888887776544
No 95
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.82 E-value=1.4e-17 Score=176.30 Aligned_cols=353 Identities=15% Similarity=0.113 Sum_probs=207.8
Q ss_pred hhHHHHHHHHHHHhhhccchhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHH
Q 008185 114 KQMLVLCGLGYWVQGFRCFPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVF 192 (574)
Q Consensus 114 ~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~ 192 (574)
.++....++.++..|.- .+..+.++++ .|.|.+|+|++.++..+.-.+ .|++|.++||. .++|+.+.+..+
T Consensus 5 ~rLs~~~f~~f~~~G~~---~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~----~~~~~~l~~~~l 76 (400)
T PF03825_consen 5 FRLSLMYFLYFFAYGAF---LPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRF----GSAKRILALLSL 76 (400)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHh----hhHHHHHHHHHH
Confidence 33334333334444432 2334447776 689999999999998887666 66899999985 355666666666
Q ss_pred HHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHH-HHHhh
Q 008185 193 LQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLF-GGYFL 271 (574)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~i-gg~l~ 271 (574)
+.++.........+ ++.+++..++..+......+..|++.-+..++ ++.-.+-..+.+++|-+++... ++.+.
T Consensus 77 ~~~~~~~~~~~~~~----f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~ 150 (400)
T PF03825_consen 77 LSALALLLLAFSSS----FWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLG 150 (400)
T ss_pred HHHHHHHHHHHhcc----HHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHH
Confidence 65555544443322 44455555555555555555566666666543 1222333444455566555433 23333
Q ss_pred ccC---ChhHHHHHHHHHHHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHh
Q 008185 272 LKT---PPTTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASV 348 (574)
Q Consensus 272 ~~~---gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~ 348 (574)
... +..+.+++.++..++.....+.+|+++.+... + ++.+ +...++.++++++|++...++..++..
T Consensus 151 ~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~--~-----~~~~---~~~~~~~~~llk~~~~~~Fll~~~l~~ 220 (400)
T PF03825_consen 151 GYLGISGTSLIFYIAAILSLLLAGFALFLPKTPPKRSA--K-----ESVK---KLLGLDALKLLKNPRFLVFLLAAFLIG 220 (400)
T ss_pred hhhccccccHHHHHHHHHHHHHHHHHHhCCCCcccccc--C-----CCcc---cccchHHHHHhcCccHHHHHHHHHHHH
Confidence 322 33456777766665555556678877522111 0 0000 111223446788998876655554421
Q ss_pred hhcccccccceeehccccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhc
Q 008185 349 AMVPVLSGSMFCYQTQCLN-INPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINL 427 (574)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~g-~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~ 427 (574)
.....+......|.++ .| .+....|.....+.++.++.....+++.+|++.++++.++.+.+++=.. +...
T Consensus 221 ~~~~~~~~f~~~yl~~-~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~----l~a~--- 292 (400)
T PF03825_consen 221 ISHAAYYTFFSIYLQE-LGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWL----LYAY--- 292 (400)
T ss_pred HHHHHHHHHHHHHHHH-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH----HHHH---
Confidence 1111111111223443 55 7777778887888889999989999999999999999888766544322 1110
Q ss_pred ccCcCcceEEeehhH----HHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHH-HhHHHHHHHHHHHHHHhhCcc
Q 008185 428 QFGVPNEVFVLCFAG----LAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASAL-CLSSIASGFLGVGLASLTGIT 500 (574)
Q Consensus 428 ~~~~~~~~~~l~~~~----l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~-~lg~~lg~~i~g~l~~~~g~~ 500 (574)
..++.+....... +.+...+........++.+.+|++.|+++.|+++.+. .+|..+|+.++|.+++.+|..
T Consensus 293 --~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~ 368 (400)
T PF03825_consen 293 --FSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGAR 368 (400)
T ss_pred --hcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcch
Confidence 0011111111111 1222223344555678899999999999999999876 689999999999999998854
No 96
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.81 E-value=8.7e-19 Score=175.83 Aligned_cols=332 Identities=14% Similarity=0.060 Sum_probs=193.6
Q ss_pred CChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHH
Q 008185 147 LHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGA 225 (574)
Q Consensus 147 ~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~ 225 (574)
.+..-.|++-+.+.+.-++ .|+||.+||+ |+|||.+.++.+..++...+.+... + ++.+++.|+++|+.-
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~-----yGRkpvll~c~~~va~s~ll~~~S~-~---F~afv~aR~l~Gi~k 135 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDR-----YGRKPVLLACLIGVALSYLLWALSR-N---FAAFVLARFLGGIFK 135 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhh-----hCchHHHHHHHHHHHHHHHHHHHHH-H---HHHHHHHHHhhhhcc
Confidence 3556678888888887655 8999999998 5899999988888888777666553 2 555556699988776
Q ss_pred HHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhc---cCChhHHHHHH---HHHHHH-HHHHhhhcc
Q 008185 226 SITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLL---KTPPTTMFLVF---AVLLSL-QLAISFSAR 298 (574)
Q Consensus 226 ~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~---~~gwr~~f~i~---ai~~~~-~~~~~~~lp 298 (574)
+-..+. .+++.|+.++|+|+..|+....+..+|.++||.+||++.+ ..|--+-++.. .++... ...+.+++|
T Consensus 136 gnl~v~-rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lp 214 (451)
T KOG2615|consen 136 GNLSVI-RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLP 214 (451)
T ss_pred CchHHH-HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 665554 6889999999999999999999999999999999999987 33333323222 222222 222346899
Q ss_pred cccccccccchhc-ch--hhhhhhhHHHHHHHHHHHHcchhhH------HHHHHHHhHhhh-cccccccceeehccccCC
Q 008185 299 EESLGLAQVSYQN-VA--SKSIAQSIKKQFSDLIATIGEESIS------YPLTWLVASVAM-VPVLSGSMFCYQTQCLNI 368 (574)
Q Consensus 299 Et~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~v~------~~~l~~~l~~~~-~~~~~~~~~~~~~~~~g~ 368 (574)
||-+...+.++.. .. .+...+..+-....-...++|+... +......+.|.- +..+.....++....+|+
T Consensus 215 ETL~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ 294 (451)
T KOG2615|consen 215 ETLPLRKRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGY 294 (451)
T ss_pred ccccchhhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCC
Confidence 9954332221000 00 0000000000001111123333222 111111111111 111122222344567999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhcCC--chhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHH
Q 008185 369 NPSVIGMSRVIGQSMLLSLTVFYDRYWKKVP--LRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAET 446 (574)
Q Consensus 369 s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~--~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~ 446 (574)
++.+.|-++...++++++....+.+..+|.. .+-.+..+..++ .+..+.... ......+.....+..+
T Consensus 295 ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~-----vP~~llls~-----~~~~~~l~~~s~l~sf 364 (451)
T KOG2615|consen 295 SSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLI-----VPAFLLLSL-----ARTPVVLYLGSTLKSF 364 (451)
T ss_pred ChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHH-----HHHHHHHhc-----cccchhhhHHHHHHHH
Confidence 9999998866666555544443333444432 121222221111 111111110 1111122223334444
Q ss_pred HHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Q 008185 447 LAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 447 ~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g 498 (574)
.+......++.+..+..|+++||++.|+..+...++.++||.++|.+.++.-
T Consensus 365 ~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~ 416 (451)
T KOG2615|consen 365 STASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQ 416 (451)
T ss_pred HHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEec
Confidence 4444444456778889999999999999999999999999999998877653
No 97
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.80 E-value=1.5e-18 Score=186.57 Aligned_cols=288 Identities=13% Similarity=-0.023 Sum_probs=199.4
Q ss_pred HHHHHHHHHhhhcc--chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHH
Q 008185 118 VLCGLGYWVQGFRC--FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQ 194 (574)
Q Consensus 118 ~~~~~~~f~~~~~~--~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~ 194 (574)
..++..++.....- +....+. -++++.+....+.+.+.+++.++|++ .++.|.|.||+| -...+....+..
T Consensus 48 ~~~~~~y~~~~~d~~si~~a~l~-g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~-----ls~~l~~~~~~w 121 (495)
T KOG2533|consen 48 PFLCYLYFHAYLDKSSIVNASLS-GLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFP-----LSKGLSVSGILW 121 (495)
T ss_pred HHHHHHHHHHhcchhcchhHHHc-CCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCC-----hHHHHHHHHHHH
Confidence 33444455555543 3333332 35678899999999999999999987 778999999974 112222222222
Q ss_pred HHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhh---
Q 008185 195 ILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFL--- 271 (574)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~--- 271 (574)
.+...+.+.. + +++.+++.|++.|+.-+...+....+++...+++|||..++++++...+|.++|.+++..+.
T Consensus 122 ~~~~~~~~~~-~---s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~ 197 (495)
T KOG2533|consen 122 GLFGFLTAAV-H---SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLN 197 (495)
T ss_pred HHHHHHHHHH-h---hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhc
Confidence 2222222222 2 36788999999998888888888888999999999999999999999999999999988763
Q ss_pred ---ccCChhHHHHHHHHHHHHHHHHh-hhccccccccc--ccchhcc---h-hhhhhhh--HHHHHHHHHHHHcchhhHH
Q 008185 272 ---LKTPPTTMFLVFAVLLSLQLAIS-FSAREESLGLA--QVSYQNV---A-SKSIAQS--IKKQFSDLIATIGEESISY 339 (574)
Q Consensus 272 ---~~~gwr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~--~~~~~~~---~-~~~~~~~--~~~~~~~~~~~~~~~~v~~ 339 (574)
...||||+|.+.+++.++..++. +++|+.+.... ..++++. + ++...+. .+...+.+++.+++|.+|.
T Consensus 198 ~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~ 277 (495)
T KOG2533|consen 198 GSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWP 277 (495)
T ss_pred CCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHH
Confidence 35799999999999999888876 57888765322 1111100 0 0000000 0123456677899999999
Q ss_pred HHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc----CCchhHHHHHHHHHHHHH
Q 008185 340 PLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKK----VPLRKLVGAVQILYASSL 415 (574)
Q Consensus 340 ~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r----~~~r~ll~~~~ll~~~~~ 415 (574)
..+..+++....+.+....|++..+..|++..+.+++.+...++.+++..+.+.+.+| ..+|.+......++...+
T Consensus 278 ~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g 357 (495)
T KOG2533|consen 278 FSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIG 357 (495)
T ss_pred HHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 8887777666666666666777777677999999998888888888888888888888 445545555444444443
No 98
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.79 E-value=1.2e-18 Score=186.88 Aligned_cols=364 Identities=13% Similarity=0.084 Sum_probs=229.5
Q ss_pred HHhcCCChhHHHHHHHHhhhhhhhhh-hheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHH
Q 008185 142 AHNLSLHPSTLQLVQNSGNLPMVAKP-LYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLL 220 (574)
Q Consensus 142 ~~~~~~s~~~~~l~~s~~~l~~~~~p-l~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 220 (574)
+.++..+..+.+++.+.+..|+.++. ..|++.||+ | .| +++..+.++.+++.++.-.+.+.. ++.+++.|++
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~---G-~r-~v~~~~~~~sa~~t~l~P~aa~~~--~~~~~~~R~l 137 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF---G-AR-RVFFISGLISALLTLLTPLAASIG--FYLLLVLRFL 137 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc---C-ch-HHHHHHHHHHHHHHHHHHHHHHhc--chhhHHHHHH
Confidence 34688899999999999999998855 589999986 4 34 445556677677766666655432 3456888999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhcc-CChhHHHHHHHHHHHHHHHHh-hhcc
Q 008185 221 SNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLK-TPPTTMFLVFAVLLSLQLAIS-FSAR 298 (574)
Q Consensus 221 ~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~-~gwr~~f~i~ai~~~~~~~~~-~~lp 298 (574)
+|++.+...+....+.+...|++||++..++...+..+|.+++..++|++.+. .||+++|++.++++.+..++. ++..
T Consensus 138 qGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 138 QGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred hHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 99999998888888899999999999999999999999999999999999998 999999999999998888875 4566
Q ss_pred cccccccccchhcchh--hhhhhhHHH--HHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHH
Q 008185 299 EESLGLAQVSYQNVAS--KSIAQSIKK--QFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIG 374 (574)
Q Consensus 299 Et~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~g 374 (574)
|++.....-+++++++ ++..+...+ ...+++++++++.+|...+..+.-....+.+....|.|+.+++|++..+.|
T Consensus 218 d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G 297 (466)
T KOG2532|consen 218 DSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETG 297 (466)
T ss_pred CCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhh
Confidence 6554432212111110 000000000 123566788999998776655553333444455567889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC--------chhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHH
Q 008185 375 MSRVIGQSMLLSLTVFYDRYWKKVP--------LRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAET 446 (574)
Q Consensus 375 l~~i~~~ig~lig~~l~~~l~~r~~--------~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~ 446 (574)
+....-.+.+.+...+.+.+.|+.. .||++-....+.....++.+.+.. -.+.+..+....+...
T Consensus 298 ~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~-------~~~~~~a~~~l~~~~~ 370 (466)
T KOG2532|consen 298 FLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS-------DEHRLLAVILLTIAIG 370 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC-------CCcchHHHHHHHHHHH
Confidence 8766665655555555544444332 234433222222111111111110 0011111111111111
Q ss_pred HHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHHHHH
Q 008185 447 LAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLPLIWI 525 (574)
Q Consensus 447 ~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l~~~ 525 (574)
+.+....-...-..+.+ ++..+..+|+.+.+.++++.++|.+.|.+.. -+ ........+++.+++.+++-+++
T Consensus 371 ~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~~----t~~eW~~VF~i~a~i~~~~~i~f 443 (466)
T KOG2532|consen 371 LSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGIIVT-DN----TREEWRIVFLIAAGILIVGNIIF 443 (466)
T ss_pred HcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeEeC-CC----CHHHHHHHHHHHHHHHHHhchhe
Confidence 22222211111122224 5788999999999999999999999888764 11 12233445555555555544443
No 99
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.79 E-value=1.1e-17 Score=174.63 Aligned_cols=344 Identities=13% Similarity=0.098 Sum_probs=199.4
Q ss_pred chhhhhHHHHHHhcCCChhHHHHHHHHhhhhh-hhhhhheeeccccccCCCccchhH-hHHHHHH-HHHHHHhhcc---c
Q 008185 132 FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPM-VAKPLYGILSDALYIGGAHRIPYI-CIGVFLQ-ILSWGPLALF---P 205 (574)
Q Consensus 132 ~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~-~~~pl~G~lsD~~~~~G~rRk~~l-~i~~~~~-~~~~~~~~~~---~ 205 (574)
+..+..+.+++++.|+|.+++|.+.+...+.. ..+|++|.++||+ | .||..+ .+..+.. ...+....+. .
T Consensus 25 i~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl---g-~kK~Ll~~i~~l~~l~~pff~~v~~pll~ 100 (412)
T PF01306_consen 25 IFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL---G-LKKHLLWFIAILLLLFGPFFIYVFGPLLQ 100 (412)
T ss_dssp HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC---T-TCSHHHHHHHHHHHTCHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh---h-hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444555888878999999999999987755 5599999999997 4 344433 2222211 1222211111 1
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHH
Q 008185 206 VAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAV 285 (574)
Q Consensus 206 ~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai 285 (574)
.|. ....++.-+..++......+..++++....+++ +.-.|-..+.+++|.+++..++|++.+ .+.+..||+..+
T Consensus 101 ~n~--~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~~--~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~ 175 (412)
T PF01306_consen 101 SNF--WLGAIIGGIYLGLVFNAGVPLSEAYAERVSRRN--GFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASA 175 (412)
T ss_dssp TT---HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHHH--SS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHH--HHHHHHHHHHHHHHHcccchHHHHHHHHHHHHh--cCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHH
Confidence 110 111111111111111222233355555554332 222344567778999999999999886 578899998876
Q ss_pred HHHHHHHHhhhcc-cccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehcc
Q 008185 286 LLSLQLAISFSAR-EESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQ 364 (574)
Q Consensus 286 ~~~~~~~~~~~lp-Et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~ 364 (574)
.+++..++.++.+ +.+......+.+ .+ +..+...++..+++++|++|...+++.........+...++.|++.
T Consensus 176 ~~~il~lll~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~ 249 (412)
T PF01306_consen 176 AAIILLLLLLLLKPDVPPQAEVADAL-GA-----KKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFAS 249 (412)
T ss_dssp HHHHHHHHHHSS---SSSSS-SSTTS-SS-----------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcCchhhhhhccc-cc-----CCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655555444433 332221111000 00 0111124566778999999988887766433333333334434432
Q ss_pred c---cCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 365 C---LNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 365 ~---~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
. .+.+...+|++...+.+...+...+.+++.+|++.|+.++++.+++++=... ..+ .++.+.+...-
T Consensus 250 ~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~-~~~---------~~~~~~i~~~k 319 (412)
T PF01306_consen 250 FFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIG-SGF---------ATNPWVISLIK 319 (412)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHT-----------SHHHHHHHH
T ss_pred HhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHH-Hhh---------hcchHHHHHHH
Confidence 2 2334566888888888899999999999999999999998876655433211 111 12223222233
Q ss_pred HHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHH-HHHHHhHHHHHHHHHHHHHHhhCcc
Q 008185 442 GLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFS-ASALCLSSIASGFLGVGLASLTGIT 500 (574)
Q Consensus 442 ~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~-~~~~~lg~~lg~~i~g~l~~~~g~~ 500 (574)
.+...-..+..++.+-++++..|++..+|.+.+. +...++|..+.+.++|.++|.+|..
T Consensus 320 lLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~ 379 (412)
T PF01306_consen 320 LLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQ 379 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcH
Confidence 3333333455666677899999999999999985 5667899999999999999999853
No 100
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.78 E-value=6e-18 Score=173.14 Aligned_cols=355 Identities=16% Similarity=0.095 Sum_probs=234.6
Q ss_pred hhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhh-hhhhhhheeeccccccCCCccchhHhHHH
Q 008185 114 KQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLP-MVAKPLYGILSDALYIGGAHRIPYICIGV 191 (574)
Q Consensus 114 ~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~-~~~~pl~G~lsD~~~~~G~rRk~~l~i~~ 191 (574)
++.+. ++..+|..++.. ....++...+++++|+|+.|.+++.++..+. ..+..+.|++.||+ | +||.++ ++.
T Consensus 13 ~~~L~-~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf---G-gR~~~~-~s~ 86 (417)
T COG2223 13 RRNLW-LSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF---G-GRKWTI-LSM 86 (417)
T ss_pred hHHHH-HHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc---C-chHHHH-HHH
Confidence 33444 555566666665 5666677788899999999999999999874 45688899999996 4 666554 455
Q ss_pred HHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhh
Q 008185 192 FLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFL 271 (574)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~ 271 (574)
++..+-.+.++++.+... ++++++++++.+++++.-.+ ....+....|||+.|.+++++. ..++|..+...++-.++
T Consensus 87 ~l~~IP~~~~~~a~~~~~-~~~ll~~gll~G~~GasFav-~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~ 163 (417)
T COG2223 87 LLLLIPCLGLAFAVTYPS-TWQLLVIGLLLGLAGASFAV-GMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVA 163 (417)
T ss_pred HHHHHHHHHHHHHccCCc-hHHHHHHHHHHhcccceehc-ccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHH
Confidence 555666666666655433 36778887776655443322 3456788899999999999877 78888888888888887
Q ss_pred ccCC---hhHHHHHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhH
Q 008185 272 LKTP---PTTMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVAS 347 (574)
Q Consensus 272 ~~~g---wr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~ 347 (574)
...| ||.+.++-.+..++..+.. +.+++.+...... + +.+. .+++..++++..|...++-+.+
T Consensus 164 ~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~-------~----~~~~--~~~~~v~~~~~~W~lsllY~~t 230 (417)
T COG2223 164 VAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASV-------K----PQLP--AQLKAVFSNKDTWLLSLLYFAT 230 (417)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccc-------c----ccch--hHHHHHhcCcchHHHHHHHHHH
Confidence 7788 9999998877777766664 4566654332111 0 1110 3344557789999888766666
Q ss_pred hhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhc
Q 008185 348 VAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINL 427 (574)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~ 427 (574)
+.....+...++.|+.+.||.++...|...........+.-.+-+++.||++.+|.......+++++..+.......
T Consensus 231 FG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~--- 307 (417)
T COG2223 231 FGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTG--- 307 (417)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccc---
Confidence 77666677777889999999999998876554444444556778899999999998887776666554432211110
Q ss_pred ccCc-Ccc-eEEeehh--HHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Q 008185 428 QFGV-PNE-VFVLCFA--GLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 428 ~~~~-~~~-~~~l~~~--~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g 498 (574)
.+. ++. .+..... .+..++++.. ..-++..+.| ++.|.+.|+...+..+|+..-|..-|...+..|
T Consensus 308 -~~~~~~~~~~~~~~l~l~~~~G~GnGs---vfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg 377 (417)
T COG2223 308 -FGHGGSFVVFVAVFLALFVFAGLGNGS---VFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG 377 (417)
T ss_pred -cccCcchHHHHHHHHHHHHHhccCcch---heeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcc
Confidence 000 111 1111111 1111112111 1112223343 478999999999999998888888888888766
No 101
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.78 E-value=3.2e-18 Score=191.62 Aligned_cols=287 Identities=13% Similarity=-0.012 Sum_probs=199.7
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
+++.++.+.+.. .....++ .++++|+++..+.|++.+.+.+++++ .++.|++.||. +||+++.++.++.+++
T Consensus 38 ~~~~~~~~~~~~g~~~~~l~-~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-----~r~~~i~~g~ll~~lg 111 (633)
T TIGR00805 38 LTCAQLQGLLYNGLVNSSLT-TIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-----HRPIVIGIGCAIMGLG 111 (633)
T ss_pred HHHHHHHHHHHHHHHHhhch-hhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-----CcceEEEecHHHHHHH
Confidence 444556666544 4445554 56777999999999999999998866 78899999983 6777777788887877
Q ss_pred HHHhhccc----------------C-----------c--------------------cchHHHHHHHHHHHHHHHHHHHH
Q 008185 198 WGPLALFP----------------V-----------A--------------------AKALPNLMACVLLSNLGASITEV 230 (574)
Q Consensus 198 ~~~~~~~~----------------~-----------~--------------------~~~~~~l~~~~~l~~~g~~~~~~ 230 (574)
.++.++.+ + + ...+..++++|+++++|.+...+
T Consensus 112 ~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~ 191 (633)
T TIGR00805 112 SFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFP 191 (633)
T ss_pred HHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchh
Confidence 77666542 0 0 00234567889999999998888
Q ss_pred HHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccC----------------------ChhHHHHHHHHHHH
Q 008185 231 AKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKT----------------------PPTTMFLVFAVLLS 288 (574)
Q Consensus 231 ~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~----------------------gwr~~f~i~ai~~~ 288 (574)
...+++.|..++++|+..+++++.+..+|+++|++++|++.+.+ .|+..|++.+++.+
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~ 271 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVAL 271 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999987542 16667888877777
Q ss_pred HHHHHhhhcccccccccc-c--chhc-c-----hhh---hhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccc
Q 008185 289 LQLAISFSAREESLGLAQ-V--SYQN-V-----ASK---SIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSG 356 (574)
Q Consensus 289 ~~~~~~~~lpEt~~~~~~-~--~~~~-~-----~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~ 356 (574)
+..++.+++|++.+.... . +.++ . +++ ......++..+.+++++++|.++...+..++.+.....+..
T Consensus 272 l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~ 351 (633)
T TIGR00805 272 LTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYIT 351 (633)
T ss_pred HHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 666555566654322110 0 0000 0 000 00011233345567789999888777666554454455555
Q ss_pred cceeehccccCCCchhHHHHHHHHHH-HHHHHHHHHHHHHhcCC--chhHHHHHHHHHH
Q 008185 357 SMFCYQTQCLNINPSVIGMSRVIGQS-MLLSLTVFYDRYWKKVP--LRKLVGAVQILYA 412 (574)
Q Consensus 357 ~~~~~~~~~~g~s~~~~gl~~i~~~i-g~lig~~l~~~l~~r~~--~r~ll~~~~ll~~ 412 (574)
.+|.|+++.+|+++.+.+++.....+ +.++|.++.+++.+|++ .|++..++.++..
T Consensus 352 ~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~ 410 (633)
T TIGR00805 352 FLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLST 410 (633)
T ss_pred HHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHH
Confidence 66778888899999999988766554 66788888899999877 4455555544433
No 102
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.77 E-value=5.1e-16 Score=169.84 Aligned_cols=165 Identities=12% Similarity=0.052 Sum_probs=118.2
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhh-hhhhhhheeeccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLP-MVAKPLYGILSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~-~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
+.+..++..+.. .....++.++++++|++..+.++..+.+... +...+++|+++||+ .+||+.+.++.++..++
T Consensus 26 ~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~----~G~r~~~~~g~~~~~ig 101 (500)
T PRK09584 26 IFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKV----LGTKRVIMLGAIVLAIG 101 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cchHHHHHHHHHHHHHH
Confidence 444555555543 3333455688888999999988887776543 44456899999983 25666677777777777
Q ss_pred HHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc--CccchHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008185 198 WGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKN--GIVGLQSYAFMAAASGGILGNLFGGYFLLKTP 275 (574)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~--~rg~~~s~~~~~~~~G~~igp~igg~l~~~~g 275 (574)
..+++...+. ...+.+.+++.++|.+...+...+++.|..+++ +|+.++++++.+.++|..+||+++|++.+..|
T Consensus 102 ~~l~~~~~~~---~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g 178 (500)
T PRK09584 102 YALVAWSGHD---AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYG 178 (500)
T ss_pred HHHHHHhccc---HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 6666654332 234556677788887766666678889998753 34557788889999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHH
Q 008185 276 PTTMFLVFAVLLSLQL 291 (574)
Q Consensus 276 wr~~f~i~ai~~~~~~ 291 (574)
||+.|++.++...+..
T Consensus 179 ~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 179 WSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999876544443
No 103
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.77 E-value=4.6e-17 Score=166.66 Aligned_cols=351 Identities=14% Similarity=0.126 Sum_probs=224.6
Q ss_pred HHHHHHHhhhh-hhhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHH
Q 008185 152 LQLVQNSGNLP-MVAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEV 230 (574)
Q Consensus 152 ~~l~~s~~~l~-~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~ 230 (574)
.+...++..+- .++.|+.|-++|.. ..||+++.+...+..++...+++.++. ..+..++++..+..++...+++
T Consensus 60 ~gy~~aia~llia~LapiLG~iaD~~----g~Rk~~~~~f~~i~i~~~~~L~~i~~~-s~~~~~l~~~il~~i~~~~s~V 134 (438)
T COG2270 60 WGYASAIAGLLIALLAPILGTIADYP----GPRKKFFGFFTAIGIISTFLLWFIPPG-SYLLLLLLFLILASIGFEFSNV 134 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccC----CCcchHHHHHHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHhcchhhe
Confidence 34444455443 35699999999973 478888887888888888888888763 2244455567778889999999
Q ss_pred HHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHH--HHhh----------------ccCChhHHHHHHHHHHHHHHH
Q 008185 231 AKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFG--GYFL----------------LKTPPTTMFLVFAVLLSLQLA 292 (574)
Q Consensus 231 ~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~ig--g~l~----------------~~~gwr~~f~i~ai~~~~~~~ 292 (574)
.+++++.|..++++.++..++.+....+|.++.-++. +++. +...-|.++.++|++.++..+
T Consensus 135 fyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~i 214 (438)
T COG2270 135 FYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFAL 214 (438)
T ss_pred ehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHh
Confidence 9999999999987777777766666666666654442 1111 123578889999998888877
Q ss_pred Hh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHh-HhhhcccccccceeehccccCCCc
Q 008185 293 IS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVA-SVAMVPVLSGSMFCYQTQCLNINP 370 (574)
Q Consensus 293 ~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l-~~~~~~~~~~~~~~~~~~~~g~s~ 370 (574)
.. +.+|+.+....... +......++-...+++..+++.+.+.++--++ .-.+. .....--.|....+|++.
T Consensus 215 Pm~~~v~~~~~~~~~~~------~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~-til~~~~~fg~~~~gls~ 287 (438)
T COG2270 215 PMILNVHDAEKISSPPP------TALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVN-TILAMGGVFGAADLGLSS 287 (438)
T ss_pred HHHhcccccccccccch------HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHH-HHHHHHHHHHHHHcCccH
Confidence 75 45766543210000 11112233333334444445555443332222 11111 111111124566899999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHh
Q 008185 371 SVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQF 450 (574)
Q Consensus 371 ~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~ 450 (574)
.+..+..+...+..++|+.+++++.+|++.|+++.++.++..+..+...... ...-+.++..++..+.+..
T Consensus 288 ~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~---------~~~~f~i~gll~g~s~G~~ 358 (438)
T COG2270 288 TELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE---------GELDFWILGLLVGTSLGGA 358 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc---------ccHHHHHHHHHHHHhcchH
Confidence 9999999999999999999999999999999998888776655544322111 1111112211121122222
Q ss_pred hHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHHHHHHhcCC
Q 008185 451 KLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLPLIWIHNVPM 530 (574)
Q Consensus 451 ~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l~~~~~vp~ 530 (574)
+.. .-.+..++.|++++++.+|+++.....++.+||+..+.+.+..|-. ...+....++.+++++.+..+|.
T Consensus 359 qA~-SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~-------r~g~~~i~vll~iGl~~L~~v~~ 430 (438)
T COG2270 359 QAS-SRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSS-------RAGVLSIIVLLLIGLLLLLRVKV 430 (438)
T ss_pred HHH-HHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcch-------hhHHHHHHHHHHhhHhhEEeecC
Confidence 222 2367899999999999999999999999999999999999987632 23333334445566666777776
Q ss_pred C
Q 008185 531 S 531 (574)
Q Consensus 531 ~ 531 (574)
.
T Consensus 431 ~ 431 (438)
T COG2270 431 P 431 (438)
T ss_pred C
Confidence 5
No 104
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.73 E-value=3.7e-16 Score=164.20 Aligned_cols=168 Identities=12% Similarity=0.055 Sum_probs=130.7
Q ss_pred HHHHHHHhhhccchhhhhHHHHHHhcCCChhH-HHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRCFPWLALNFHMAHNLSLHPST-LQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~~~~~~~~~~l~~~~~~s~~~-~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
+|+..|..-+........+ ++.+++|++.++ .|.+.+.+..+|++ +.+.|+++||+ |-|+++.++.+...+.
T Consensus 32 lC~fGF~~e~R~n~s~a~p-~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-----G~K~vL~l~~l~Wsl~ 105 (511)
T TIGR00806 32 LCFYGFMAQFRPGESFITP-YLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-----RYKPVLVLQALSFVCV 105 (511)
T ss_pred HHHHHHHHHhhchHHHHHH-HHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-----CchHHHHHHHHHHHHH
Confidence 4555566667653333333 667789999999 99999999999977 77899999996 4566777788888888
Q ss_pred HHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 008185 198 WGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPT 277 (574)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr 277 (574)
+.++++..+ +..+.+.|++.|++-+... +...++....|+++|+++.++...+..+|.+++++++++ +..+|||
T Consensus 106 t~L~~fa~S----l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr 179 (511)
T TIGR00806 106 WLLLLLGTS----VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWI 179 (511)
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCch
Confidence 887777642 6778899999999888877 778999999999999999999999999999999999999 5568999
Q ss_pred HHHHHHHHHHH---HHHHHhhhccc
Q 008185 278 TMFLVFAVLLS---LQLAISFSARE 299 (574)
Q Consensus 278 ~~f~i~ai~~~---~~~~~~~~lpE 299 (574)
+-+.+.-+-.+ +.+++.+++|-
T Consensus 180 ~y~~Ln~Isl~s~~~a~~~a~~LP~ 204 (511)
T TIGR00806 180 SYSTLNIISLVFMTFSVFLALFLKR 204 (511)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 86655533222 22333467773
No 105
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.73 E-value=1.1e-16 Score=173.75 Aligned_cols=363 Identities=12% Similarity=-0.003 Sum_probs=227.1
Q ss_pred chhHHHHHHHHH-HHhhhccchhhhhHHHHHHhcCCChhHHHHHHHHhhhhh-hhhhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGY-WVQGFRCFPWLALNFHMAHNLSLHPSTLQLVQNSGNLPM-VAKPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~-f~~~~~~~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~-~~~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
-|-+++..++.. ++.++..... .....++++|+.+..+++|+.++..... ..+|+.+.+.||+ +.|++.++|
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~G-v~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-----g~R~v~i~G 117 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFG-LLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-----GCRTVMIAG 117 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheeh-hhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-----CchHHHHHH
Confidence 455554333333 3334433222 2334567789999999999999887654 5599999999984 567788889
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHH
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMAC-VLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGY 269 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~ 269 (574)
.++..+++.+.+++.+ ++++++. -++.|+|.++...+.-..+..++ +++|+.+.++...+..+|.++-|.+..+
T Consensus 118 ~~v~~~g~~lssF~~~----i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~ 192 (509)
T KOG2504|consen 118 GLVAALGLLLSSFATS----LWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKY 192 (509)
T ss_pred HHHHHHHHHHHHHHhh----HHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHH
Confidence 9999999988877754 4445544 56678888887766555555444 4789999999999999999999999999
Q ss_pred hhccCChhHHHHHHHHHHHHHHHHhhhcccccccc---------------------cccchhcch---h-----------
Q 008185 270 FLLKTPPTTMFLVFAVLLSLQLAISFSAREESLGL---------------------AQVSYQNVA---S----------- 314 (574)
Q Consensus 270 l~~~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~---------------------~~~~~~~~~---~----------- 314 (574)
+.+.+|||+.+++.+.+.+-..+..+.+++..... .+.+..+.+ .
T Consensus 193 l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (509)
T KOG2504|consen 193 LLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLK 272 (509)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhh
Confidence 99999999999999888865555544433311110 000000000 0
Q ss_pred --hhhhhhHHHHHHHH---HHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHH
Q 008185 315 --KSIAQSIKKQFSDL---IATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTV 389 (574)
Q Consensus 315 --~~~~~~~~~~~~~~---~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~ 389 (574)
....+....+..-. +.++++|.++...+...+.+.........++.+ .+.+|++..+...+....++..+++-+
T Consensus 273 ~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~-~~~~g~~~~~aa~l~Siigi~~i~gRi 351 (509)
T KOG2504|consen 273 RGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSY-AKSLGLSSNDAAFLLSIIGVSDIIGRI 351 (509)
T ss_pred hCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCChhhhHHHHHHHHHhhhhhhh
Confidence 00000000011111 356788877766655444222221111112223 347899999999999999999999999
Q ss_pred HHHHHHhcCCchhHHH--HHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHH-HHHHhhcCCC
Q 008185 390 FYDRYWKKVPLRKLVG--AVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFS-MLLARLCPQG 466 (574)
Q Consensus 390 l~~~l~~r~~~r~ll~--~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~-~l~~~~~p~~ 466 (574)
+.+.+.++...++... ++.++.++.. +++... .+.+.......+++...+ .+..+. ..+.++++.+
T Consensus 352 ~~G~laD~~~~~~~~~~~~~ll~~gl~~---~~~p~~-------~~~~~l~~~~~~fG~~~g-~~~~l~~~i~~~~~g~~ 420 (509)
T KOG2504|consen 352 ILGLLADKPGIRALVLFLLTLLIAGLAR---LFLPFA-------TTYVGLIVFSILFGFCVG-SFSSLTPVILVDLVGLE 420 (509)
T ss_pred hhhhhcCccccchHHHHHHHHHHHHHHH---HHHHHh-------ccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcChh
Confidence 9999998877544433 3333222222 111110 011111112222222221 222222 4578899999
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Q 008185 467 CEGSLTSFSASALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 467 ~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g 498 (574)
.-..++|+...++.++..+||.+.|.+.+..|
T Consensus 421 ~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg 452 (509)
T KOG2504|consen 421 KLSNAYGLLLLFQGIGALVGPPIAGLLYDITG 452 (509)
T ss_pred hcchHHHHHHHHhHHHHHcCcccceeeeeccC
Confidence 99999999999999999999999998887665
No 106
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.73 E-value=8.4e-18 Score=172.54 Aligned_cols=401 Identities=13% Similarity=0.046 Sum_probs=230.9
Q ss_pred HHHHhhhcc-chhhhhHHHHHHhcC-------CChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHH
Q 008185 123 GYWVQGFRC-FPWLALNFHMAHNLS-------LHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFL 193 (574)
Q Consensus 123 ~~f~~~~~~-~~~~~~~~~l~~~~~-------~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~ 193 (574)
+.|...++. ...+..+.+-.-+.| .+....+++-.+..++-++ +.++|++.|++ +||.++....++
T Consensus 49 GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-----GRK~vYG~~liI 123 (538)
T KOG0252|consen 49 GFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKF-----GRKKVYGKELII 123 (538)
T ss_pred hhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-----cchhhhhHHHHH
Confidence 345555554 444444433333333 3455677777778888877 66799999985 677777777777
Q ss_pred HHHHHHHhhcccCc--c-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 194 QILSWGPLALFPVA--A-KALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 194 ~~~~~~~~~~~~~~--~-~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
++++..+.++.... + ....++..+|++.++|.+.-.+.....+.|.+.++.||...+...+....|.+.|.+++-.+
T Consensus 124 mIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv 203 (538)
T KOG0252|consen 124 MIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIV 203 (538)
T ss_pred HHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHH
Confidence 78887755554321 1 22466788899998888876666667788998888999888766555555555444444332
Q ss_pred h----ccC-----------ChhHHHHHHHHHHHHHHHHhhhcccccccccccch------hcchhh-hh-----------
Q 008185 271 L----LKT-----------PPTTMFLVFAVLLSLQLAISFSAREESLGLAQVSY------QNVASK-SI----------- 317 (574)
Q Consensus 271 ~----~~~-----------gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~------~~~~~~-~~----------- 317 (574)
. ..+ =||..|.+.++.+++++...+.+|||.+......+ ++..++ +.
T Consensus 204 ~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~ 283 (538)
T KOG0252|consen 204 SAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESD 283 (538)
T ss_pred HHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccC
Confidence 2 111 29999999988887777767889998765421110 000000 00
Q ss_pred hhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehc---cccCCCchhHHH-----H----HHHHHHHHH
Q 008185 318 AQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQT---QCLNINPSVIGM-----S----RVIGQSMLL 385 (574)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~---~~~g~s~~~~gl-----~----~i~~~ig~l 385 (574)
....++..+.+.+.+... .-+.++-...+|+..-..+...-.++. +..|+.+....+ . .+....+.+
T Consensus 284 ~~~~~~~~~~F~~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~v 362 (538)
T KOG0252|consen 284 VPPPSNSFGLFSRLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTV 362 (538)
T ss_pred CCCcccccchHHHHHHHH-HHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccC
Confidence 000000111111112222 112222222234333222222222222 224555443333 1 122223333
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHH---HHHHHhh
Q 008185 386 SLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPF---SMLLARL 462 (574)
Q Consensus 386 ig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~---~~l~~~~ 462 (574)
.|.++...+.++.+++.+.+.+.+++.+.+++.. ..++. . .....+..+ ..+..++++ +.|. .+..+|.
T Consensus 363 PGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~---~~y~~-~-~~~~Gf~v~-y~l~~ff~N--FGPn~ttfivpaE~ 434 (538)
T KOG0252|consen 363 PGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIA---GPYNQ-L-ENTIGFVVL-YSLTFFFGN--FGPNATTFIVPAEI 434 (538)
T ss_pred CceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHc---CCccc-c-cccCceeeh-HHHHHHHHh--cCCCceeEEeehhh
Confidence 4445555677889999998888887776654321 11221 0 111122222 233333332 2332 2346899
Q ss_pred cCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHh
Q 008185 463 CPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLPLIWIHNVPMSETIIEKGRK 540 (574)
Q Consensus 463 ~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l~~~~~vp~~~~~~~~~~~ 540 (574)
+|.+.||+..|+.....++|..+|......+.+.-- .........+.+.+.+.++++++-+++||++++++||..
T Consensus 435 FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~y---p~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~leei~ 509 (538)
T KOG0252|consen 435 FPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNY---PPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSLEEIS 509 (538)
T ss_pred chHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccC---CccccchHHHHHHHHHHHHhHheeEEeecccccCHHHhc
Confidence 999999999999999999999999888777777210 111223455667777778888888899999999998773
No 107
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.71 E-value=1.5e-15 Score=165.63 Aligned_cols=336 Identities=15% Similarity=0.062 Sum_probs=193.4
Q ss_pred HHHHHhcCCChhHHHHHHHHhhhhhh-hhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHH
Q 008185 139 FHMAHNLSLHPSTLQLVQNSGNLPMV-AKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMAC 217 (574)
Q Consensus 139 ~~l~~~~~~s~~~~~l~~s~~~l~~~-~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 217 (574)
.++..++|-+ ....|+.+...++.+ ..|+.|.+||.+ +||..++.+.++..+..++.+.+.+ ..++++.
T Consensus 68 ~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-----GRr~~~i~g~~l~vvG~Iv~atA~~----~~~~iag 137 (599)
T PF06609_consen 68 PYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-----GRRYFFIIGSLLGVVGSIVCATAQN----MNTFIAG 137 (599)
T ss_pred HHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-----cchHHHHHHHHHHHhHHHHhhcCCc----HHHHHHH
Confidence 3666778865 566777777777654 489999999974 5778888888888888887776643 5667888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHh-h-
Q 008185 218 VLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAIS-F- 295 (574)
Q Consensus 218 ~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~-~- 295 (574)
..+.++|.+..... ...++|..+.+.|+...++......+...+||.++..+..+.+|||.|++.+++..+.+++. +
T Consensus 138 ~~l~GvgaG~~~~~-~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 138 MVLYGVGAGVQELA-ALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred HHHHHHhhHHHHHH-HHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 88888888777654 45589999988887666555444444555677777766667799999999999887776653 3
Q ss_pred hcccccccc-cc-c-chhcc---h----------------------h-hhhhhh------------------HHHHH---
Q 008185 296 SAREESLGL-AQ-V-SYQNV---A----------------------S-KSIAQS------------------IKKQF--- 325 (574)
Q Consensus 296 ~lpEt~~~~-~~-~-~~~~~---~----------------------~-~~~~~~------------------~~~~~--- 325 (574)
..|.++... .+ . +++.. | . ...+.+ +.+..
T Consensus 217 Y~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~ 296 (599)
T PF06609_consen 217 YFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAP 296 (599)
T ss_pred hCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccC
Confidence 344332211 11 0 11110 1 0 000000 00100
Q ss_pred H---HHHHHHcchhhHHH-HHHHHhHhhhcccccccceeehccccCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 008185 326 S---DLIATIGEESISYP-LTWLVASVAMVPVLSGSMFCYQTQCLNINP---SVIGMSRVIGQSMLLSLTVFYDRYWKKV 398 (574)
Q Consensus 326 ~---~~~~~~~~~~v~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~---~~~gl~~i~~~ig~lig~~l~~~l~~r~ 398 (574)
+ -..+++++++.+.. ++..++.....+.....+|......++-++ ...++......++.+.|..+.+.+.++.
T Consensus 297 ~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i 376 (599)
T PF06609_consen 297 KDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI 376 (599)
T ss_pred CCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc
Confidence 0 12356777544333 233333111111111112222223344443 2456666667777777777777777655
Q ss_pred CchhH-HHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHH
Q 008185 399 PLRKL-VGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSAS 477 (574)
Q Consensus 399 ~~r~l-l~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~ 477 (574)
++-|. ++++.+++++.. ..+..... ++.-..+....+.++..+....|..+..+-.+|++..|++.|+..+
T Consensus 377 r~~Kw~li~~~~~~ta~~-Gama~~~~-------~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s 448 (599)
T PF06609_consen 377 RHIKWQLIFGSVLMTAFC-GAMAAVRP-------DNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGS 448 (599)
T ss_pred cchhHHHHHHHHHHHHHH-HHHHHccC-------CCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHH
Confidence 54443 344544443321 11111111 1111112222222222233444555556667899999999999999
Q ss_pred HHHhHHHHHHHHHHHH
Q 008185 478 ALCLSSIASGFLGVGL 493 (574)
Q Consensus 478 ~~~lg~~lg~~i~g~l 493 (574)
++.+|+++|..+...+
T Consensus 449 ~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 449 IRSIGGSIGYAIYNAI 464 (599)
T ss_pred HHHHhhHHHHHHHHHH
Confidence 9999999987765443
No 108
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.70 E-value=3.3e-21 Score=208.02 Aligned_cols=375 Identities=17% Similarity=0.071 Sum_probs=216.0
Q ss_pred HHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHH
Q 008185 151 TLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITE 229 (574)
Q Consensus 151 ~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~ 229 (574)
..++..+...++..+ .+++|.++||+ +||+.+.++.++..++..+.++.+.. .+...++++|++.|++.+...
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-----GRk~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~R~~~G~~~g~~~ 120 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY-----GRKPALIISALLMIIGSILIAFAPSY-NNFWMLLIGRFLIGFGIGGAY 120 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc-----cccccccccccccccccccccccccc-ccccccccccccccccccccc
Confidence 467778888888777 66789999985 56677777777777888777777522 124667888999999988888
Q ss_pred HHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhcc---CChhHHHHHHHHHHHHHHHHhhhcccccccccc
Q 008185 230 VAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLK---TPPTTMFLVFAVLLSLQLAISFSAREESLGLAQ 306 (574)
Q Consensus 230 ~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~---~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~ 306 (574)
.....++.|..+++.|+...++...+..+|.+++..++-.+... .+||+.+++.+++.++..+..+++||++++...
T Consensus 121 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~ 200 (451)
T PF00083_consen 121 VVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLS 200 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceecc
Confidence 78888999999999999999988888888888888776544333 349999999988887766666789999987653
Q ss_pred cchhcch-----h---h-hhhhhH---HHHH-------HHHHHHHcchhhH-HHHHHHHhHhhhcccccccceeeh---c
Q 008185 307 VSYQNVA-----S---K-SIAQSI---KKQF-------SDLIATIGEESIS-YPLTWLVASVAMVPVLSGSMFCYQ---T 363 (574)
Q Consensus 307 ~~~~~~~-----~---~-~~~~~~---~~~~-------~~~~~~~~~~~v~-~~~l~~~l~~~~~~~~~~~~~~~~---~ 363 (574)
+++.+.+ + + ...++. ++.. ....++++++... .......+.............+|. .
T Consensus 201 ~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~ 280 (451)
T PF00083_consen 201 KGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIF 280 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccc
Confidence 3222111 0 0 000000 0000 0112233332211 111111110111000101111121 2
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHH
Q 008185 364 QCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGL 443 (574)
Q Consensus 364 ~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l 443 (574)
+..+.+.. -+..+...+..+++..+...+.+|+++|++++.+.++.+++.+....... .............+....+
T Consensus 281 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~l 357 (451)
T PF00083_consen 281 ENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFF-LGVSSSSWWSILSIVFLAL 357 (451)
T ss_pred cccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccceeeee
Confidence 33455544 11122222333334444446778899998888777666555443210010 0000000001111111111
Q ss_pred HHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHH
Q 008185 444 AETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLPL 522 (574)
Q Consensus 444 ~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l 522 (574)
..........|. ..+..|++|.+.|+++.|+...+.+++..+++.+...+.+..+. .....++.++..+..+
T Consensus 358 ~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~-------~~~~~i~~~~~~i~~i 430 (451)
T PF00083_consen 358 FFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGG-------WGVFLIFAGVCLIAII 430 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------cccchhhHHHHHHHHh
Confidence 111112222333 35679999999999999999999998888888776665554441 1112222333333334
Q ss_pred HHHHhcCCCHHHHHHHHhc
Q 008185 523 IWIHNVPMSETIIEKGRKR 541 (574)
Q Consensus 523 ~~~~~vp~~~~~~~~~~~~ 541 (574)
+.+.++|||+++++||.++
T Consensus 431 ~~~~~lpET~g~~l~ei~~ 449 (451)
T PF00083_consen 431 FVYFFLPETKGKTLEEIQE 449 (451)
T ss_pred heeEEEeeCCCCCHHHHHh
Confidence 4567899999999998875
No 109
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.70 E-value=1.7e-14 Score=155.60 Aligned_cols=160 Identities=15% Similarity=0.049 Sum_probs=109.4
Q ss_pred HHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHH
Q 008185 122 LGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWG 199 (574)
Q Consensus 122 ~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~ 199 (574)
+..+...+.. .....++.++.+++|.++.+.+.+.+.+.....+ .++.|+++||+ .+||+.+.++.++..+...
T Consensus 16 ~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRi----lGrrr~iliG~il~~lg~l 91 (493)
T PRK15462 16 ALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKV----LGNRMAVMLGALLMAIGHV 91 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----cCcHHHHHHHHHHHHHHHH
Confidence 3334434433 3334455578888999999999998888776554 55789999984 2566666677777666655
Q ss_pred HhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc--CccchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 008185 200 PLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKN--GIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPT 277 (574)
Q Consensus 200 ~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~--~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr 277 (574)
+++....+ ...+.+...+..+|.+.......++++|..|++ +|..+.++.+.+.++|..++|++.|++.+..|||
T Consensus 92 ll~~~~~~---~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~ 168 (493)
T PRK15462 92 VLGASEIH---PSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWA 168 (493)
T ss_pred HHHHhhcc---hhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChH
Confidence 55432211 111222233333444443344467889998764 6888899999999999999999999999989999
Q ss_pred HHHHHHHHHHH
Q 008185 278 TMFLVFAVLLS 288 (574)
Q Consensus 278 ~~f~i~ai~~~ 288 (574)
+.|++.++..+
T Consensus 169 ~~F~iaaigm~ 179 (493)
T PRK15462 169 MGFGLAAVGMI 179 (493)
T ss_pred HHHHHHHHHHH
Confidence 99999765433
No 110
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.68 E-value=1.7e-14 Score=147.08 Aligned_cols=345 Identities=15% Similarity=0.105 Sum_probs=231.2
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhhhh-hheeeccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVAKP-LYGILSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~p-l~G~lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
+....|.-|+.. +... +.+++++.|+++..+++++...+..+|.+.. ..|.+.+|+ ++|.-++++..++++.
T Consensus 18 ~t~lFfl~G~~~~l~di-Lip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-----gyk~gi~lgL~l~avg 91 (422)
T COG0738 18 LTSLFFLWGFITCLNDI-LIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-----GYKAGIVLGLLLYAVG 91 (422)
T ss_pred HHHHHHHHHHHhhcchh-hHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-----hhHHHHHHHHHHHHHH
Confidence 445556666665 4444 4458899999999999999999999998754 589999985 4555566687777777
Q ss_pred HHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhcc----
Q 008185 198 WGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLK---- 273 (574)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~---- 273 (574)
..+..-+++. ..+..+++..++.+.|.+..+..++.++.++.++++...-+++.+....+|.++||++++.++..
T Consensus 92 ~~lF~pAa~~-~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~ 170 (422)
T COG0738 92 AALFWPAASS-KSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVAL 170 (422)
T ss_pred HHHHhhhhhh-hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhh
Confidence 7666544332 23566677788888999999999999999999887667778888999999999999999988762
Q ss_pred ---------------CChhHHHHHHHHHHHHHHHHhhh--cccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchh
Q 008185 274 ---------------TPPTTMFLVFAVLLSLQLAISFS--AREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEES 336 (574)
Q Consensus 274 ---------------~gwr~~f~i~ai~~~~~~~~~~~--lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (574)
..|++.|.+.+.+.+++.+.... .||.+.......+ .++. ...+++++|.
T Consensus 171 ~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~-----------~~~~--~~~~l~~~~~ 237 (422)
T COG0738 171 TMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGA-----------SGSA--GLSSLFQNKH 237 (422)
T ss_pred ccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccc-----------cccc--hHHHHHhChH
Confidence 24888998887776666655443 4544332211100 0000 2234567888
Q ss_pred hHHHHHHHHhHhhhccccccc-ceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Q 008185 337 ISYPLTWLVASVAMVPVLSGS-MFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSL 415 (574)
Q Consensus 337 v~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~ 415 (574)
+..-.+..++ |.......+. ++.|..+..|.++.+.........++.++|-++..++.+|+...|.+...+++..+.+
T Consensus 238 ~~~gvl~~Fl-YVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~ 316 (422)
T COG0738 238 LRLGVLAIFL-YVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLL 316 (422)
T ss_pred HHHHHHHHHH-HHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 8887777776 5544333333 3345566688899998888888889999999888899999999998887765544332
Q ss_pred hHHHHhhhhhhcccCcCcceEEeehhHHHHH-HHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 008185 416 LLDLILVRQINLQFGVPNEVFVLCFAGLAET-LAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLA 494 (574)
Q Consensus 416 l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~ 494 (574)
+. ..+.. . .+.+...+..+ +...++.....+..+..|++.+ ..|..-.+...|+++-|.+-|.+.
T Consensus 317 ~~-~~l~~---------g--~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts--~~s~~l~maivGGAiiP~l~G~i~ 382 (422)
T COG0738 317 LA-VALIG---------G--VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTS--VGSGLLVMAIVGGAIIPPLQGVIA 382 (422)
T ss_pred HH-HHHhc---------C--hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc--ccceeeeeheecchHHHHHHHHHH
Confidence 22 11111 1 11111111111 2223333335666677774433 233344556788899999999999
Q ss_pred HhhCc
Q 008185 495 SLTGI 499 (574)
Q Consensus 495 ~~~g~ 499 (574)
|..|.
T Consensus 383 d~~g~ 387 (422)
T COG0738 383 DMFGI 387 (422)
T ss_pred Hhhhh
Confidence 98874
No 111
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.66 E-value=6e-14 Score=141.02 Aligned_cols=324 Identities=16% Similarity=0.081 Sum_probs=209.7
Q ss_pred hhHHHHHHhcCCChhHHHHHHHHhhhhhh-hhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHH
Q 008185 136 ALNFHMAHNLSLHPSTLQLVQNSGNLPMV-AKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNL 214 (574)
Q Consensus 136 ~~~~~l~~~~~~s~~~~~l~~s~~~l~~~-~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l 214 (574)
++...+++++|+|.+.+|++.++..+.+. +.|+..++..|+ |-.| .+..+.++.++...+=... ....+
T Consensus 33 PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~---g~er--~l~~~Llli~~G~~iR~~~-----~~~~L 102 (395)
T COG2807 33 PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF---GEER--SLFLALLLIAAGILIRSLG-----GLPLL 102 (395)
T ss_pred hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH---hhHH--HHHHHHHHHHHHHHHHhcc-----cHHHH
Confidence 34456788999999999999999999875 488888888775 4233 3333444433333322222 13445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccC-ChhHHHHHHHHHHHHHHHH
Q 008185 215 MACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKT-PPTTMFLVFAVLLSLQLAI 293 (574)
Q Consensus 215 ~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~-gwr~~f~i~ai~~~~~~~~ 293 (574)
+..-.+.+.|.+...+..++++.+.+| ++-+.++++|.+...+|..+++.+.-.+.++. |||....+-+.++++.+++
T Consensus 103 ~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~ 181 (395)
T COG2807 103 FLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLI 181 (395)
T ss_pred HHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 666777788888888888888888887 55688999999999999999999988888776 7999888777777666554
Q ss_pred hhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhH
Q 008185 294 SFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVI 373 (574)
Q Consensus 294 ~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~ 373 (574)
.+ |...+......+. +. ++-..++++|.-|.+.+|+.+.....|....-+|-++. +.|+|+.+.
T Consensus 182 Wl--Pq~~r~~~~~~~~----~~---------~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~a 245 (395)
T COG2807 182 WL--PQALREQAASIAT----KL---------VSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEA 245 (395)
T ss_pred Hh--hhccccccccccc----cc---------ccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHh
Confidence 43 2211110000000 00 00112467888999999988755555555554554444 589999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhH
Q 008185 374 GMSRVIGQSMLLSLTVFYDRYWKKV-PLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKL 452 (574)
Q Consensus 374 gl~~i~~~ig~lig~~l~~~l~~r~-~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 452 (574)
|.+.....+..+..+...+.+.+|. +.|.+.....+++ ..+++.+.+.. ...+.+- .+..+++....
T Consensus 246 G~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~-l~G~~G~~~~P---------~~~~~lw--~~llG~G~G~~ 313 (395)
T COG2807 246 GSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLM-LVGLVGLLLAP---------GQLPILW--ALLLGLGQGGA 313 (395)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH-HHHHHHHHHhh---------hhHHHHH--HHHHhCccchH
Confidence 9887777777777777777777653 4455554443333 33333332221 1111000 12223333334
Q ss_pred HHH-HHHHHhhc-CCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Q 008185 453 LPF-SMLLARLC-PQGCEGSLTSFSASALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 453 ~p~-~~l~~~~~-p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g 498 (574)
+|. ++++.... .+++.+...|+.+.+..+=.++||.+.|.+-|..|
T Consensus 314 F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g 361 (395)
T COG2807 314 FPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG 361 (395)
T ss_pred HHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC
Confidence 444 44555443 45677888899999999999999999999999876
No 112
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.58 E-value=2.3e-13 Score=136.23 Aligned_cols=390 Identities=12% Similarity=0.022 Sum_probs=209.2
Q ss_pred chhHHHHHHHHHHHhhhccchhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhhh-hhheeeccccccCCCccchhHhHHH
Q 008185 113 NKQMLVLCGLGYWVQGFRCFPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVAK-PLYGILSDALYIGGAHRIPYICIGV 191 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~-pl~G~lsD~~~~~G~rRk~~l~i~~ 191 (574)
.|........+.+...+-.+...-+.+-+....|.+..+..++......++.++ -.||.++|++ | |||-.. +..
T Consensus 76 q~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~---g-rr~~f~-~T~ 150 (528)
T KOG0253|consen 76 QWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI---G-RRKGFN-LTF 150 (528)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh---h-cchhhh-hhH
Confidence 555555444444333332222222333456667888888888888888888874 4799999986 3 665443 343
Q ss_pred HHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhh
Q 008185 192 FLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFL 271 (574)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~ 271 (574)
+...+.-.+-+..++ +..++++|.+-++|.+. .+...++-.|..|..+|+..+-.. ..+.+|.++...+.=.++
T Consensus 151 l~t~v~~~is~~spn----f~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm 224 (528)
T KOG0253|consen 151 LVTGVFGVISGASPN----FASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVM 224 (528)
T ss_pred HHHHHHHHhhcCCCC----eehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHH
Confidence 333333333333332 56678888887766655 333456678888887887765444 778899999999988888
Q ss_pred ccCChhHHHHHHHHHHHHHHHHhhhcccccccccccchhcc-----------h------------hhhhh--hh--H---
Q 008185 272 LKTPPTTMFLVFAVLLSLQLAISFSAREESLGLAQVSYQNV-----------A------------SKSIA--QS--I--- 321 (574)
Q Consensus 272 ~~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~-----------~------------~~~~~--~~--~--- 321 (574)
.++||||..........+.....+++||+++.....+.+.+ + .+..+ +. .
T Consensus 225 ~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~ 304 (528)
T KOG0253|consen 225 SNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDS 304 (528)
T ss_pred HhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhh
Confidence 89999998888776555555566789998765432111000 0 00000 00 0
Q ss_pred -----HHHHHHHHHHHcchhhHH-----HHHHH--HhHhhhccc-------ccccce-------eehccccCCCc-hhHH
Q 008185 322 -----KKQFSDLIATIGEESISY-----PLTWL--VASVAMVPV-------LSGSMF-------CYQTQCLNINP-SVIG 374 (574)
Q Consensus 322 -----~~~~~~~~~~~~~~~v~~-----~~l~~--~l~~~~~~~-------~~~~~~-------~~~~~~~g~s~-~~~g 374 (574)
++.......++ .|.+.+ ..++. ...|+.... .....+ ++.....+... ..--
T Consensus 305 ~~~a~ke~rg~~~nLl-sp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~d 383 (528)
T KOG0253|consen 305 KSSAAKEVRGGTTNLL-SPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKD 383 (528)
T ss_pred hhccccccccchHhhc-ChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhH
Confidence 00000011111 111111 11110 011111100 111111 11111011110 1112
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHH
Q 008185 375 MS-RVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLL 453 (574)
Q Consensus 375 l~-~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 453 (574)
+. .+...+..+.|..+.+.+.+|.|+|+.+..+.+++.++.+....+.. ++...++ ...+.++....+.
T Consensus 384 YrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~--------rn~~tvl--lf~arafisg~fq 453 (528)
T KOG0253|consen 384 YRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKT--------RNAYTVL--LFTARAFISGAFQ 453 (528)
T ss_pred HHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcC--------cchhHHH--HHHHHHHHhchhe
Confidence 22 34445566667777777788889999888887777666554332221 1111111 1111122222222
Q ss_pred HHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCH
Q 008185 454 PFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLPLIWIHNVP-MSE 532 (574)
Q Consensus 454 p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l~~~~~vp-~~~ 532 (574)
...++.-|++|...|++..|...++..+|+.+.|+++ ...+ . +.+..+.+...+.+++.+...+.| |+|
T Consensus 454 vaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e-~--------s~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 454 VAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAE-L--------STSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred EEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhc-c--------ceeehHHHHHHHHHHHHHHheeeeeccC
Confidence 2235677999999999999999999999999999987 2211 1 122334444445555555555666 555
Q ss_pred HH
Q 008185 533 TI 534 (574)
Q Consensus 533 ~~ 534 (574)
++
T Consensus 524 GR 525 (528)
T KOG0253|consen 524 GR 525 (528)
T ss_pred CC
Confidence 43
No 113
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.54 E-value=1.1e-12 Score=134.84 Aligned_cols=262 Identities=13% Similarity=0.047 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhcc----------------C
Q 008185 211 LPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLK----------------T 274 (574)
Q Consensus 211 ~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~----------------~ 274 (574)
+..+++..++.+.|.++.++..+.++++..+++++++.+++......+|.++||++++.+... .
T Consensus 10 ~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~ 89 (310)
T TIGR01272 10 YVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAA 89 (310)
T ss_pred HHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHH
Confidence 566778888899999999999999999999988899999999999999999999999987732 3
Q ss_pred ChhHHHHHHHHHHHHHHHHhhh--cccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcc
Q 008185 275 PPTTMFLVFAVLLSLQLAISFS--AREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVP 352 (574)
Q Consensus 275 gwr~~f~i~ai~~~~~~~~~~~--lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~ 352 (574)
.|+++|++.+.+.++..++..+ +||.+.+..+ + ....+.. +.++.+++|.++...+.+++ |...-
T Consensus 90 ~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~-~------~~~~~~~-----~~~~~~~~~~~~l~~~~~f~-yvg~e 156 (310)
T TIGR01272 90 KVHTPYLLLAGALAVLAIIFAFLPLPELQEADVA-R------VSSGDTT-----QKTSAFQFTHLVLGALGIFV-YVGAE 156 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCCCccccc-c------ccccccc-----chhhHHhhHHHHHHHHHHHH-HHHHH
Confidence 6999999777666555554333 5664322111 0 0000000 01123455666654444444 33222
Q ss_pred -cccccceeehcc--ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhccc
Q 008185 353 -VLSGSMFCYQTQ--CLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQF 429 (574)
Q Consensus 353 -~~~~~~~~~~~~--~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~ 429 (574)
...+.++.|..+ .+|+++.+.++.......+.++|..+.+++.+|++.|+++.++.++..+..++. ....
T Consensus 157 ~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~-~~~~------ 229 (310)
T TIGR01272 157 VSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGA-ALTH------ 229 (310)
T ss_pred HHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH-HHcC------
Confidence 122223445553 479999999999999999999999999999999999998877665554433211 1110
Q ss_pred CcCcceEEeehhHHHHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 430 GVPNEVFVLCFAGLAETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 430 ~~~~~~~~l~~~~l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
.... .. ..+..+++.....|. ..+..+..|+ ..+++.++. ....+|+++.|.+.|.+.|..|.
T Consensus 230 ---~~~~-~~-~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~ 293 (310)
T TIGR01272 230 ---GYVA-MW-FVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGI 293 (310)
T ss_pred ---CHHH-HH-HHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccc
Confidence 0100 00 111112222233444 4555666654 355666664 56778999999999999997764
No 114
>PTZ00207 hypothetical protein; Provisional
Probab=99.53 E-value=3.3e-11 Score=132.48 Aligned_cols=179 Identities=15% Similarity=0.069 Sum_probs=127.2
Q ss_pred chhHHHHHHHHHHHhhhccchhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhhhhhheeeccccccCCCccchhHhHHHH
Q 008185 113 NKQMLVLCGLGYWVQGFRCFPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVAKPLYGILSDALYIGGAHRIPYICIGVF 192 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~ 192 (574)
+|...+...+...+.+..+...... ..+++++|+|..+.+++.++......++++.|+++||+ +||+.+.++.+
T Consensus 26 Rw~~lva~~~~~~~~g~~y~fsv~s-~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~-----G~R~vllig~l 99 (591)
T PTZ00207 26 RFALLVLGAFCSICTSFMYAFNLIS-GAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYL-----GPRPIFVLSMT 99 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHHHHH
Confidence 6665553444444444443222322 35688899999999998877433223466789999985 57777778888
Q ss_pred HHHHHHHHhhcccCc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHH-HHHHHHH
Q 008185 193 LQILSWGPLALFPVA--AKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGIL-GNLFGGY 269 (574)
Q Consensus 193 ~~~~~~~~~~~~~~~--~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~i-gp~igg~ 269 (574)
+..++..++++..+. ..+++.+.++|++.++|.+..++.....+.+.+| ++||.++++...+..+|+++ +++..++
T Consensus 100 l~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l 178 (591)
T PTZ00207 100 VFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAF 178 (591)
T ss_pred HHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888777775221 0136777888999999988887777777888775 78999999999999998875 6666665
Q ss_pred hhccCChhHHHHHHHHHHHHHHHHh-hhcccc
Q 008185 270 FLLKTPPTTMFLVFAVLLSLQLAIS-FSAREE 300 (574)
Q Consensus 270 l~~~~gwr~~f~i~ai~~~~~~~~~-~~lpEt 300 (574)
+. .+|++.|++.+++++++.++. +++++.
T Consensus 179 ~~--~~~~~~fl~l~vl~~vv~ll~~~~vr~p 208 (591)
T PTZ00207 179 FS--DNTSAYFFFLMSFALVVGILAIVFMRLP 208 (591)
T ss_pred HH--HhHHHHHHHHHHHHHHHHHHHHhheeCC
Confidence 54 479999999999888877764 455444
No 115
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=99.52 E-value=1.1e-12 Score=131.76 Aligned_cols=368 Identities=12% Similarity=0.114 Sum_probs=214.1
Q ss_pred hhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhhhhhheeecccccc--CCCccchhHhHH
Q 008185 114 KQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVAKPLYGILSDALYI--GGAHRIPYICIG 190 (574)
Q Consensus 114 ~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~pl~G~lsD~~~~--~G~rRk~~l~i~ 190 (574)
++.+.++.+.|..||+.. +.. ++|.+++. =|+|-+..+. .+....||.++.+|+|+.|.+.. +| |||.|++-.
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~-fS~ay~P~sLKllWaPiVDs~y~k~~G-rrksWvvp~ 105 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAI-FSFAYWPFSLKLLWAPIVDSVYSKRFG-RRKSWVVPC 105 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhh-hhhhhhHHHHHHHHHhhhHHHHHHhhc-cccceeeeh
Confidence 334444788899999977 555 77777774 4888887775 56667799999999999994322 24 888887766
Q ss_pred HHHHHHHHHHhhcccCc-----cc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHH
Q 008185 191 VFLQILSWGPLALFPVA-----AK--ALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILG 263 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~-----~~--~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~ig 263 (574)
..+..+.+..++...+. .. ....+...+++..++++..|+++|+....+..+++-|.+.. +..+|.-+|
T Consensus 106 q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST----~q~Vg~~~G 181 (510)
T KOG3574|consen 106 QYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYAST----CQSVGQTAG 181 (510)
T ss_pred HHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhH----HHHHHHhhh
Confidence 65544444444443221 11 11223335667789999999999999999998888776644 445566666
Q ss_pred HHHHHHhhcc-----------CChh---------HHHHHHHHHHHHHHHH-hhhcccccccccccchhcchhhhhhhhHH
Q 008185 264 NLFGGYFLLK-----------TPPT---------TMFLVFAVLLSLQLAI-SFSAREESLGLAQVSYQNVASKSIAQSIK 322 (574)
Q Consensus 264 p~igg~l~~~-----------~gwr---------~~f~i~ai~~~~~~~~-~~~lpEt~~~~~~~~~~~~~~~~~~~~~~ 322 (574)
.++++.+.-. .+|. .-.|.-+.+..+...+ .++-+|.+....+ +.....+
T Consensus 182 yfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~---------e~~~~i~ 252 (510)
T KOG3574|consen 182 YFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDE---------ELELGIH 252 (510)
T ss_pred HHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhh---------hhhcCHH
Confidence 6565533210 1122 1122223333333333 3455554433111 1112344
Q ss_pred HHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchh
Q 008185 323 KQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRK 402 (574)
Q Consensus 323 ~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ 402 (574)
+..+-++..++-|.+...+.+... +-.......+....-.-+.|++..+.++..++.....++.....+++..+.....
T Consensus 253 ~~yk~l~~vLklk~v~~la~i~lt-~K~gf~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~ 331 (510)
T KOG3574|consen 253 ESYKLLRDVLKLKSVRWLAGILLT-GKLGFQAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLN 331 (510)
T ss_pred HHHHHHHHHHcCccHHHHHHHHHH-HHHHhhhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcch
Confidence 455556666777777655555544 3444444455444444568999988888766665566666666666554221110
Q ss_pred H----HHHHHHHHHHHHhHHHHhhhhhhc-ccCcCcceEEe--ehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHH
Q 008185 403 L----VGAVQILYASSLLLDLILVRQINL-QFGVPNEVFVL--CFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFS 475 (574)
Q Consensus 403 l----l~~~~ll~~~~~l~~l~l~~~~~~-~~~~~~~~~~l--~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~ 475 (574)
. +.+-.+ ...+.....+....+.. .-.++..++++ +...+.+++...+++..++..+++.++..-||+|.+.
T Consensus 332 ~~lka~~~R~~-~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlL 410 (510)
T KOG3574|consen 332 VFLKAVPYRLG-GGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLL 410 (510)
T ss_pred HHHHhhhHHHH-HHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHH
Confidence 0 111111 11111111111111111 00111112221 2233444444566777788899999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHhhCcc
Q 008185 476 ASALCLSSIASGFLGVGLASLTGIT 500 (574)
Q Consensus 476 ~~~~~lg~~lg~~i~g~l~~~~g~~ 500 (574)
|...|+|+..-..+...+.+.+++.
T Consensus 411 NTLsnLGg~wp~tv~l~l~D~ltv~ 435 (510)
T KOG3574|consen 411 NTLSNLGGNWPGTVALWLADGLTVK 435 (510)
T ss_pred HHHHHhcCCcHHHHHHHhcccCcee
Confidence 9999999998888889999887654
No 116
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.49 E-value=7.6e-13 Score=140.13 Aligned_cols=186 Identities=17% Similarity=0.163 Sum_probs=126.5
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHH-hcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAH-NLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICI 189 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~-~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i 189 (574)
+|..+.+..+..|.+.+.. +..+..-+|+++ |.+.+.+..|++.+...++..+ .|++|..+.|. ++-|||++.
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~---~~~k~Pli~- 107 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT---GSVKKPLIV- 107 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc---CCcccCHHH-
Confidence 5666665666677766654 333333345544 5678888999999999888765 89999999974 334677664
Q ss_pred HHHHHHHHHHHh-h--cccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHH
Q 008185 190 GVFLQILSWGPL-A--LFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLF 266 (574)
Q Consensus 190 ~~~~~~~~~~~~-~--~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~i 266 (574)
+.++++++.++. + ..+++ ..+.++++|++.|+|.+...+ .-++++|....++|.++++....+..+|.++||.+
T Consensus 108 s~ii~~~g~llY~~l~~~~~~--~~y~mL~~R~l~Gvg~~n~a~-lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~ 184 (488)
T KOG2325|consen 108 SFLIAIIGNLLYLALAYVPNG--VKYLMLVARILTGVGVGNFAV-LRAYIADASTVEDRPRAFAATSGGFVLGIILGPTI 184 (488)
T ss_pred HHHHHHHHHHHHHHHHhcccc--hHHHHHHHHHHcCcCcccHHH-HHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHH
Confidence 666666666555 2 23332 356678889999998766554 46889998888889999987777666666666666
Q ss_pred HHHhhc--cCC-----------hhHHHHHHHHHHHHHHHHh-hhccccccccc
Q 008185 267 GGYFLL--KTP-----------PTTMFLVFAVLLSLQLAIS-FSAREESLGLA 305 (574)
Q Consensus 267 gg~l~~--~~g-----------wr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~ 305 (574)
+.++.. ..| +...-|+.+++..+..++. ++++|.++...
T Consensus 185 q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~ 237 (488)
T KOG2325|consen 185 QLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGII 237 (488)
T ss_pred HHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCcc
Confidence 655432 112 2246677777777766664 57899876653
No 117
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.49 E-value=1.6e-13 Score=132.66 Aligned_cols=383 Identities=14% Similarity=0.015 Sum_probs=204.3
Q ss_pred HHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhhh-hhheeeccccccCCCccchhHhHHHHHHH
Q 008185 118 VLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVAK-PLYGILSDALYIGGAHRIPYICIGVFLQI 195 (574)
Q Consensus 118 ~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~-pl~G~lsD~~~~~G~rRk~~l~i~~~~~~ 195 (574)
+++++..|...+.+ -+. ++..+.+.+.+++.++..++.+++..|-++- .+.|++.||. +|. |.-.++ -+.+..
T Consensus 47 v~mc~lgfgsyfcyd~p~-alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~--fgi-r~gtii-~~~fv~ 121 (459)
T KOG4686|consen 47 VFMCLLGFGSYFCYDAPG-ALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRR--FGI-RLGTII-LCIFVF 121 (459)
T ss_pred HHHHHhcccceeecCCch-hhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhh--hhh-hHHHHH-HHHHHH
Confidence 33444444444443 222 2222456667788888899999999987664 4689999973 231 211122 222223
Q ss_pred HHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008185 196 LSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTP 275 (574)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~g 275 (574)
+.-++.+.-. -...++++++.||+.++|+-...++.+.+.+-.++.+|-+.++++.....-+|..+--.+.+++.+..+
T Consensus 122 ~GqliFa~Gg-i~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~ 200 (459)
T KOG4686|consen 122 LGQLIFAAGG-ISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMG 200 (459)
T ss_pred HHHHHHHhch-HHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHH
Confidence 3333232221 112478888999998888766666667777777777888888888766666777665555555554311
Q ss_pred ------------hhHHHH-HHHHHHHHHHHHhhhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHH
Q 008185 276 ------------PTTMFL-VFAVLLSLQLAISFSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLT 342 (574)
Q Consensus 276 ------------wr~~f~-i~ai~~~~~~~~~~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l 342 (574)
--.+|- ......++... ..-+-+.+...+..+++.. .. +..| +.+... + .|.+|...+
T Consensus 201 ~~~~~~ghT~LG~~l~~~~~tc~~slical-~lg~~D~rAerilh~e~g~--~G--e~pk--Ltdv~~-f-~ppfw~~~i 271 (459)
T KOG4686|consen 201 RMFPGVGHTLLGLWLCFEVKTCKQSLICAL-SLGLSDDRAERILHLEEGF--LG--EEPK--LTDVNT-F-YPPFWVLVI 271 (459)
T ss_pred HhcccchHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhHHHHHHhhhcCc--cc--CCcc--cccccc-c-CccHHHHHH
Confidence 101111 11111111111 1111121111111000000 00 0000 001101 1 255555444
Q ss_pred HHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhh
Q 008185 343 WLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILV 422 (574)
Q Consensus 343 ~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~ 422 (574)
..++-|....-+.+.-+.++++.+|+|+...+-........+.....+++.+.|++|++-....+.++..+..=..+.+
T Consensus 272 icv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F- 350 (459)
T KOG4686|consen 272 ICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF- 350 (459)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh-
Confidence 3333121111122333457788999999888776544444555556777888899887766555544433322211111
Q ss_pred hhhhcccCcCcceEEeehhHHHHHHHH-hhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCccc
Q 008185 423 RQINLQFGVPNEVFVLCFAGLAETLAQ-FKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITF 501 (574)
Q Consensus 423 ~~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~ 501 (574)
+.++ .+. ...+.++.. +..-..+-+++.+.|+++.||+||+.++++|+|-++.|++.|.+.+.-|
T Consensus 351 t~ls-------Py~----~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g--- 416 (459)
T KOG4686|consen 351 TFLS-------PYT----SMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG--- 416 (459)
T ss_pred hhcc-------HHH----HHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC---
Confidence 1111 010 011111111 1111123456778999999999999999999999999999999887543
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcCCC
Q 008185 502 GDYSSLPVGIVIQFLAALLPLIWIHNVPMS 531 (574)
Q Consensus 502 ~~~~~l~~~~li~~~~~ll~l~~~~~vp~~ 531 (574)
.|..+-.+++++..+++.....++.+.++
T Consensus 417 -~y~~le~ffl~~~~~aL~svgil~~~N~k 445 (459)
T KOG4686|consen 417 -SYDNLEAFFLIIGLMALTSVGILFYLNKK 445 (459)
T ss_pred -chhhHHHHHHHHHHHHHHHHHHHhheecc
Confidence 35566677777777777666666666543
No 118
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=99.45 E-value=1.3e-11 Score=129.03 Aligned_cols=371 Identities=13% Similarity=0.113 Sum_probs=217.3
Q ss_pred HHHHHHHHhhhcc-chhhhhHHHHHH-hcCCChhHHHHHHHHhhhhhhhhhhheeeccccccC--CCccchhHhHHHHHH
Q 008185 119 LCGLGYWVQGFRC-FPWLALNFHMAH-NLSLHPSTLQLVQNSGNLPMVAKPLYGILSDALYIG--GAHRIPYICIGVFLQ 194 (574)
Q Consensus 119 ~~~~~~f~~~~~~-~~~~~~~~~l~~-~~~~s~~~~~l~~s~~~l~~~~~pl~G~lsD~~~~~--G~rRk~~l~i~~~~~ 194 (574)
++.+.|+.||+.- +....+|+.+++ .-++|-++.+. .|+...|+.++.+|+|+.|.+..+ | |||.|++-...+.
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~-fSla~~PfSlKlLWaPiVDs~y~~~~G-RRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAI-FSLASYPFSLKLLWAPIVDSVYSKRIG-RRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHhee-eeeeechhHHHHhhhhhhhhhcccccC-CcchhhhHHHHHH
Confidence 4677899999975 555567766665 13678888874 577778999999999999986443 5 8888988777766
Q ss_pred HHHHHHhhcccC---------------cc---c--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHH
Q 008185 195 ILSWGPLALFPV---------------AA---K--ALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFM 254 (574)
Q Consensus 195 ~~~~~~~~~~~~---------------~~---~--~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~ 254 (574)
.+.++.++...+ .. . ....+..++++..+-++..|+++|+..-.+..++.++.+..
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~AST---- 157 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYAST---- 157 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHH----
Confidence 666555544330 00 0 11223445555566778889999999988888777766544
Q ss_pred HHHHHHHHHHHHHH--Hhhcc------CChh--------------HHHHHHHHHHHHHHH-Hhhhccccccccc----cc
Q 008185 255 AAASGGILGNLFGG--YFLLK------TPPT--------------TMFLVFAVLLSLQLA-ISFSAREESLGLA----QV 307 (574)
Q Consensus 255 ~~~~G~~igp~igg--~l~~~------~gwr--------------~~f~i~ai~~~~~~~-~~~~lpEt~~~~~----~~ 307 (574)
+..+|.-+|-+++- ++.-+ .-+| .-|| +++.+++.+ +.++-+|.+.... +.
T Consensus 158 cqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fw--g~~~l~~T~~v~~~k~E~~~~~~~~~~~~ 235 (544)
T PF13000_consen 158 CQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFW--GWVFLIVTILVAFFKKEKPHSESLPKIEP 235 (544)
T ss_pred HHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHH--HHHHHHHHHHHheEeecccccccCccccc
Confidence 44455555555543 22211 0011 1222 223333333 3455666542211 00
Q ss_pred -chhcc----------hh----hhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchh
Q 008185 308 -SYQNV----------AS----KSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSV 372 (574)
Q Consensus 308 -~~~~~----------~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~ 372 (574)
.+.+. +. ......+++..+.+++.++-|.+....+..+. .-+..+...+....-.-..|++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~-~KigF~a~da~T~LKLlEkG~~KE~ 314 (544)
T PF13000_consen 236 INKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLT-AKIGFQANDAVTSLKLLEKGLSKED 314 (544)
T ss_pred cccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHH-HHhccccchhhhHHHHHHcCCCHHH
Confidence 00000 00 01123456667788888898888776666555 2333333443333333469999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCch---------------------------hHHHHHHHHHHHHHhHHHHhhhhh
Q 008185 373 IGMSRVIGQSMLLSLTVFYDRYWKKVPLR---------------------------KLVGAVQILYASSLLLDLILVRQI 425 (574)
Q Consensus 373 ~gl~~i~~~ig~lig~~l~~~l~~r~~~r---------------------------~ll~~~~ll~~~~~l~~l~l~~~~ 425 (574)
.++..++..-..++..++.+|+.+..... ++...+...-.+..++....+...
T Consensus 315 LAl~~li~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~f 394 (544)
T PF13000_consen 315 LALLVLIDFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFF 394 (544)
T ss_pred hHHHHHHhhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeC
Confidence 88877766666777777778876543310 111122211111111111111111
Q ss_pred hcccCcCcceEE--eehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Q 008185 426 NLQFGVPNEVFV--LCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 426 ~~~~~~~~~~~~--l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g 498 (574)
+..-.++..+|. +....+.++....++++.+++-+++.+|..-||++.+.|++.|+|+.....+.-.+.|.+-
T Consensus 395 P~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT 469 (544)
T PF13000_consen 395 PSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT 469 (544)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence 101112222222 2233445555567888888999999999999999999999999999988888777877663
No 119
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.45 E-value=1.7e-13 Score=147.20 Aligned_cols=216 Identities=14% Similarity=0.035 Sum_probs=157.7
Q ss_pred cccCccccccccccccccCCcCCCCCCcccccccccccccccchhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCCh
Q 008185 71 LVTTTESSSVSLKESKRLGSWAGGGGDEERRRDFGEVGINNFNKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHP 149 (574)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~v~w~~~~d~~np~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~ 149 (574)
+|+|++||+||++|.+||.+-.++++.++.++.|++.. +.+.++|. +.+..|+..+.. +.....|.|+++.+|.+.
T Consensus 217 ~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i--~ts~~vwa-i~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v 293 (466)
T KOG2532|consen 217 SDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAI--LTSPPVWA-IWISAFGGNWGFYLLLTYLPTYLKEVLGFDV 293 (466)
T ss_pred cCCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHH--HcCHHHHH-HHHHHHHHHHHHHHHHHHhhHHHHHHhCCCh
Confidence 69999999999999999988877777666445777765 56777777 677777777765 555556669999999999
Q ss_pred hHHHHHHHHhhhhh-hhhhhheeeccccccC----CCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHH--HH
Q 008185 150 STLQLVQNSGNLPM-VAKPLYGILSDALYIG----GAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLL--SN 222 (574)
Q Consensus 150 ~~~~l~~s~~~l~~-~~~pl~G~lsD~~~~~----G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l--~~ 222 (574)
.+.|++.++..+.. .++.++|.++|+...+ ..+||.+-.++....++++.++++.++..... .+++..+ +.
T Consensus 294 ~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~--a~~~l~~~~~~ 371 (466)
T KOG2532|consen 294 RETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLL--AVILLTIAIGL 371 (466)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchH--HHHHHHHHHHH
Confidence 99999999998865 4599999999987442 12667777777788888888888887543211 1222222 22
Q ss_pred HHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhcc---CChhHHHHHHHHHHHHHHHHh
Q 008185 223 LGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLK---TPPTTMFLVFAVLLSLQLAIS 294 (574)
Q Consensus 223 ~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~---~gwr~~f~i~ai~~~~~~~~~ 294 (574)
.|....... ....|.. |++.+.++++.+....+.++++|.+.|.+.+. ..||++|++.+++..+..++.
T Consensus 372 ~g~~~~Gf~--~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f 443 (466)
T KOG2532|consen 372 SGFNISGFY--KNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIF 443 (466)
T ss_pred cccchhhhH--hhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchhe
Confidence 222222111 1123322 46778999999999999999999999999842 379999999998887776654
No 120
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.43 E-value=4.6e-11 Score=128.09 Aligned_cols=359 Identities=16% Similarity=0.081 Sum_probs=201.0
Q ss_pred hhHHHHHHHHHHHhhhccchhhhhHHHHHHhcCCCh-hHHHHHHHHh-----hhhhhhhhhheeeccccccCCCccchhH
Q 008185 114 KQMLVLCGLGYWVQGFRCFPWLALNFHMAHNLSLHP-STLQLVQNSG-----NLPMVAKPLYGILSDALYIGGAHRIPYI 187 (574)
Q Consensus 114 ~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~~s~-~~~~l~~s~~-----~l~~~~~pl~G~lsD~~~~~G~rRk~~l 187 (574)
+.....+.+-.|..++.+..........+..++-+. .+.+...... ..+....|+.|.+||+ ++||..+
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~-----~grk~~L 95 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDR-----YGRKVVL 95 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhh-----hhhhhhH
Confidence 334444444445655554322332223333333221 2223333333 2344558999999998 4788877
Q ss_pred hHHHHHHHHHHHHhhcccCccchHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHH
Q 008185 188 CIGVFLQILSWGPLALFPVAAKALPNLMACVLLS-NLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLF 266 (574)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~-~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~i 266 (574)
......+++.-..+.+.. +++++ ... ..+.+.......++++|....++|...+++.+.....+..+||.+
T Consensus 96 ~~~~~~~~l~~~~~~~~~------~~~~~--~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~ 167 (463)
T KOG2816|consen 96 LLPLFGTILPALCLLFQG------YWFFL--LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPAL 167 (463)
T ss_pred HHHHHHHHHhHHHHHHHH------HHHhh--hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHH
Confidence 766665555544433332 11222 111 112222233446779999999999999999999899999999999
Q ss_pred HHHhhccCChhHHHHHHHHHHHHHHHHh-hhcccccccccccchhcch----hhhhhhhHHHHHHHHHHHHcchhhHHHH
Q 008185 267 GGYFLLKTPPTTMFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVA----SKSIAQSIKKQFSDLIATIGEESISYPL 341 (574)
Q Consensus 267 gg~l~~~~gwr~~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 341 (574)
++++.+..|.-.+|++.++...+..+.. +++||+..+..+.. .+.. .+.......+..+.....-.+|..+..+
T Consensus 168 ~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~ 246 (463)
T KOG2816|consen 168 GGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD-ATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLL 246 (463)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccc-ccccccCCCcccchhhhhhhhhhcccCCCccchHHH
Confidence 9999999999999999988887777664 67999865543220 0000 0000111222222222211233344333
Q ss_pred HHHHhHhhhc-ccccccceeehccccCCCchhHHHHHHHHHHHHHHH-HHHHHHHHhcCCchhHHHHHHHHHHHHHhHHH
Q 008185 342 TWLVASVAMV-PVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSL-TVFYDRYWKKVPLRKLVGAVQILYASSLLLDL 419 (574)
Q Consensus 342 l~~~l~~~~~-~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig-~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l 419 (574)
...++.+... .......++|....++|++.+.+.......+...++ ..+...+.+..+.+++...+.+...+. ....
T Consensus 247 l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~-~~~~ 325 (463)
T KOG2816|consen 247 LVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQ-LLLF 325 (463)
T ss_pred HHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHH-HHHH
Confidence 3333322211 111223466777889999999986544433333333 444456666777777555554433322 2211
Q ss_pred HhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Q 008185 420 ILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLT 497 (574)
Q Consensus 420 ~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~ 497 (574)
.+.. ..|.... ..+...+..+......++++....++++|.++++...+..++..++|.+-+.++...
T Consensus 326 af~~---------~~w~~~~-~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 326 AFAT---------ETWMMFA-AGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred HHhc---------cchhhhH-HHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 1111 1121111 111111222222223466788899999999999999999999999999888877644
No 121
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.28 E-value=9e-10 Score=115.90 Aligned_cols=168 Identities=16% Similarity=0.097 Sum_probs=120.3
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcC----CChhHHHHHHHHhh-hhhhhhhhheeeccccccCCCccchhHhHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLS----LHPSTLQLVQNSGN-LPMVAKPLYGILSDALYIGGAHRIPYICIGVFL 193 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~----~s~~~~~l~~s~~~-l~~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~ 193 (574)
+...-+..-+.+ -....+..|+..+++ +|.+++.-+.+.+. +.|....+.|+++||+ .++|..+.+++++
T Consensus 26 if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~----LG~~~tI~lGail 101 (498)
T COG3104 26 IFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRV----LGTRRTIVLGAIL 101 (498)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHh----cchhHHHHHHHHH
Confidence 555556666654 222333345655566 99988887777764 4566555789999997 3555666778888
Q ss_pred HHHHHHHhhccc-CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--cCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 194 QILSWGPLALFP-VAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQK--NGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 194 ~~~~~~~~~~~~-~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~--~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
..+.-++++... .. ...+.+...+..+|.+..-.....++.|..++ .+|-...++++++.++|+.++|++.+++
T Consensus 102 ~~iGh~~L~~~~~~~---~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~ 178 (498)
T COG3104 102 MAIGHLVLAISSVSG---PGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLL 178 (498)
T ss_pred HHHHHHHHhcccccc---ccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHH
Confidence 888888887774 22 23355666666677777666667788999865 3466667888899999999999999999
Q ss_pred hccCChhHHHHHHHHHHHHHHHHh
Q 008185 271 LLKTPPTTMFLVFAVLLSLQLAIS 294 (574)
Q Consensus 271 ~~~~gwr~~f~i~ai~~~~~~~~~ 294 (574)
.++.||...|.+.++-..+.++..
T Consensus 179 ~~~~g~~~gF~~aavGm~~gl~~f 202 (498)
T COG3104 179 AINYGWHVGFGLAAVGMIIGLVIF 202 (498)
T ss_pred HHhhCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999876665555543
No 122
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.19 E-value=2.5e-10 Score=124.14 Aligned_cols=175 Identities=10% Similarity=-0.069 Sum_probs=108.1
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
++.++. +++.+++..... ....-.+.|+++++|++..+.++..++..++..+ .+++|+++||+ + +||..+. .
T Consensus 257 ~~~~~~-~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~---g-~r~~~~~-~ 330 (467)
T PRK09556 257 NPVIWL-LCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA---N-GRRALVA-C 330 (467)
T ss_pred ChHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---C-CCchHHH-H
Confidence 444544 445554443332 2222344578888999999999988888777655 78899999986 3 4444332 2
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHH-HHHHHHHHHHH
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAAS-GGILGNLFGGY 269 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~-G~~igp~igg~ 269 (574)
.....+...++.....+ +...+.+++++.+++.............|..|++.||.+.++.+....+ |..++|.+.|+
T Consensus 331 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~ 408 (467)
T PRK09556 331 IALALIIFTLGVYQHAT--SEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGM 408 (467)
T ss_pred HHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHH
Confidence 22222222111111111 1223334444443322111112234567999999999999999888885 77999999999
Q ss_pred hhc------------cCChhHHHHHHHHHHHHHHHHhh
Q 008185 270 FLL------------KTPPTTMFLVFAVLLSLQLAISF 295 (574)
Q Consensus 270 l~~------------~~gwr~~f~i~ai~~~~~~~~~~ 295 (574)
+.+ ..||+..|++.++..++..+..+
T Consensus 409 i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 409 IADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 998 57899999998777666655543
No 123
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.18 E-value=5.6e-10 Score=122.19 Aligned_cols=163 Identities=14% Similarity=0.124 Sum_probs=106.4
Q ss_pred hhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHH-HHHHhhcccCccchHHH
Q 008185 136 ALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQIL-SWGPLALFPVAAKALPN 213 (574)
Q Consensus 136 ~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~-~~~~~~~~~~~~~~~~~ 213 (574)
..+.++++++|.+..+.++......++..+ .|+.|+++||+ +||+.+.++.+...+ +...+.....+ +...
T Consensus 272 ~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----grr~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 344 (490)
T PRK10642 272 YMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-----GRRPFVILGSVALFVLAIPAFILINSN--VIGL 344 (490)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHHHhCC--CHHH
Confidence 445577777899988877776666666555 77899999985 455555555443222 22211111111 1334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccC-ChhHHHHHHHHHHHHHHH
Q 008185 214 LMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKT-PPTTMFLVFAVLLSLQLA 292 (574)
Q Consensus 214 l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~-gwr~~f~i~ai~~~~~~~ 292 (574)
+++.+++.+++.+.......+++.|..|++.|+.++++.+....+++.++|.+.|++.+.. +|+..+++.++..++..+
T Consensus 345 ~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~ 424 (490)
T PRK10642 345 IFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLI 424 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 4556666555444443344567789999999999998754445566788999999888754 478888877766666666
Q ss_pred Hhhhccccccccc
Q 008185 293 ISFSAREESLGLA 305 (574)
Q Consensus 293 ~~~~lpEt~~~~~ 305 (574)
..+++||++.+..
T Consensus 425 ~~~~~pes~~~~~ 437 (490)
T PRK10642 425 TGVTMKETANRPL 437 (490)
T ss_pred HHHHhccccCCCC
Confidence 5677899987644
No 124
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.18 E-value=7.8e-09 Score=107.21 Aligned_cols=362 Identities=14% Similarity=0.029 Sum_probs=188.7
Q ss_pred chhHHHHHHHHHHHhhhccchhhhhHHHHHHhcCCChhHHHHHHHHhhhhhh-hhhhheeeccccccCCCccchhHhHHH
Q 008185 113 NKQMLVLCGLGYWVQGFRCFPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMV-AKPLYGILSDALYIGGAHRIPYICIGV 191 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~-~~pl~G~lsD~~~~~G~rRk~~l~i~~ 191 (574)
+|.++..+++..+..++.-+.+.++..+..+.+| +...+-|..-++++.++ ++...-|+.|+. | -|.-.+++.
T Consensus 43 RW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~---G--LR~a~llgt 116 (480)
T KOG2563|consen 43 RWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF---G--LRTALLLGT 116 (480)
T ss_pred HhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc---c--hHHHHHHHH
Confidence 7888888888888888776777788778888888 66666777777766554 366677899974 3 444455566
Q ss_pred HHHHHHHHHhhcccCccchHHHHHHHHHHHHHHH---HHHHHHH---HHHHHhhh-cccCccchHHHHHHHHHHHHHHHH
Q 008185 192 FLQILSWGPLALFPVAAKALPNLMACVLLSNLGA---SITEVAK---DALVAEYG-QKNGIVGLQSYAFMAAASGGILGN 264 (574)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~---~~~~~~~---~a~i~d~~-~~~~rg~~~s~~~~~~~~G~~igp 264 (574)
.+..+...+=...... ...... -|.+.-.|. +.+.+.. ++-+++.+ +++||..+.++..++..+|.++|-
T Consensus 117 ~ln~iGa~Ir~iss~p--~v~~~f-~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ 193 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLP--FVPPLF-RRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGF 193 (480)
T ss_pred HHHHHHHHHhhhccCc--cccccc-hhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHh
Confidence 6555544433322211 001111 112222222 2222222 23355554 678998888877776667777777
Q ss_pred HHHHHhhccC------ChhH--HHHHHHHHHHHHHHHh-hhcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcch
Q 008185 265 LFGGYFLLKT------PPTT--MFLVFAVLLSLQLAIS-FSAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEE 335 (574)
Q Consensus 265 ~igg~l~~~~------gwr~--~f~i~ai~~~~~~~~~-~~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (574)
++.-.++.+- .|-. +|+..+++.++.++.. +.-+|+++.+....+. ...-....+.+++.++++
T Consensus 194 llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~-------~~~~~~f~~si~~~~~n~ 266 (480)
T KOG2563|consen 194 LLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQA-------ALQDASFPKSIKSCFKNR 266 (480)
T ss_pred hccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHh-------hhhcCcHHHHHHHHHcCc
Confidence 7666665432 3544 3444444444433333 3334433222111100 000011345666778888
Q ss_pred hhHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHH-HHHHHHHHH
Q 008185 336 SISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVG-AVQILYASS 414 (574)
Q Consensus 336 ~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~-~~~ll~~~~ 414 (574)
.+...++...+..++++...+.+. -....-|.+....|+......++.++++.+.+.+.||.+.-+..+ +........
T Consensus 267 ~F~il~~~ygi~~g~F~~l~~~l~-~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 267 QFIILAICYGIGLGLFNSLSTLLN-LALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVG 345 (480)
T ss_pred cHHHHHHHHhhhHHHHHHHHHHhh-hccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHH
Confidence 876554433332222222221111 011234555567777777777777777788888888766544433 222222222
Q ss_pred HhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHH
Q 008185 415 LLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGL 493 (574)
Q Consensus 415 ~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l 493 (574)
.+....+ .. ...+.+.+.....+.++ ......|. .-+..|..-|..||+-.|+.+...++-+.+=.++-+.+
T Consensus 346 ~~~l~~~----t~--~~~~~viv~~t~~~~g~-~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~ 418 (480)
T KOG2563|consen 346 TLMLLTC----TL--FLGDSVIVFTTCGLLGF-FGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGIL 418 (480)
T ss_pred HHHHHHh----hc--cCCceEehhhhHHHHHH-hhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHH
Confidence 1211111 11 11122222111222222 22334454 33456777888899999998887776655555555555
Q ss_pred HHhhC
Q 008185 494 ASLTG 498 (574)
Q Consensus 494 ~~~~g 498 (574)
.+-.+
T Consensus 419 ~~~~~ 423 (480)
T KOG2563|consen 419 AEDLG 423 (480)
T ss_pred hhccC
Confidence 55443
No 125
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.17 E-value=8.9e-10 Score=116.99 Aligned_cols=155 Identities=9% Similarity=0.053 Sum_probs=107.3
Q ss_pred hhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHH
Q 008185 136 ALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNL 214 (574)
Q Consensus 136 ~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l 214 (574)
..+.++++++|.++.+.+++.+...+...+ .+++|+++||+ +||+.+..+.....+.+...... ++ ...+
T Consensus 238 ~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-----g~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~ 308 (393)
T PRK15011 238 NMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-----GKRFLMRVAAVAGVCFYAGMLMA-HS---PAIL 308 (393)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ChHHHHHHHHHHHHHHHHHHHHH-hh---HHHH
Confidence 345577888999999999887766554444 67899999985 34444444444433333322222 22 3334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHh
Q 008185 215 MACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAIS 294 (574)
Q Consensus 215 ~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~ 294 (574)
++.+++.+++.+...........|..| ++||.++++++....+|..+||.++|++.+..||++.|++.+++.++..++.
T Consensus 309 l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK15011 309 LGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCL 387 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 556666555544443344455677776 5689999998888899999999999999998999999999887777766666
Q ss_pred hhcccc
Q 008185 295 FSAREE 300 (574)
Q Consensus 295 ~~lpEt 300 (574)
+++||+
T Consensus 388 ~~~~~~ 393 (393)
T PRK15011 388 LRIKDV 393 (393)
T ss_pred HhhcCC
Confidence 777764
No 126
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.11 E-value=7.2e-12 Score=137.35 Aligned_cols=377 Identities=15% Similarity=0.123 Sum_probs=2.5
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
|+.+++ +++..+.|.+.. .....+. .+++.|+++.++.|++.+.+-++..+ ..+.+++.+| .+|.+|+..+
T Consensus 2 k~fl~~-~~~~~~~q~~~~g~~~~~lt-tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~-----~hrprwig~g 74 (539)
T PF03137_consen 2 KWFLVF-LCLLGLFQMMVSGYVNSSLT-TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGR-----GHRPRWIGIG 74 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eehHHH-HHHHHHHHHHHHHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----cCCcceeeec
Confidence 344444 555566665444 3334443 56777999999999999999887655 6667788876 3777788888
Q ss_pred HHHHHHHHHHhhcccCcc----------------------------------------------chHHHHHHHHHHHHHH
Q 008185 191 VFLQILSWGPLALFPVAA----------------------------------------------KALPNLMACVLLSNLG 224 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~l~~~~~l~~~g 224 (574)
.++.+++.+++++.+-.. ..+..++++.++.|+|
T Consensus 75 ~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG 154 (539)
T PF03137_consen 75 ALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIG 154 (539)
T ss_dssp -----------------------------------------------------------------------------SSS
T ss_pred HHHHHHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhcc
Confidence 888888777665421000 0012233345566888
Q ss_pred HHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhcc----------------CChhHH--HH----H
Q 008185 225 ASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLK----------------TPPTTM--FL----V 282 (574)
Q Consensus 225 ~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~----------------~gwr~~--f~----i 282 (574)
.+...+..-+++-|..++++.+...|+......+||++|-++|+.+... .+.||+ .| +
T Consensus 155 ~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli 234 (539)
T PF03137_consen 155 ATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLI 234 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHH
Confidence 8888888889999999988888888999999999999999999977642 123332 23 3
Q ss_pred HHHHHHHHHHHhhhcccccccc----ccc--c--hhc-chhh---------hhhhhHHHHHHHHHHHHcchhhHHHHHHH
Q 008185 283 FAVLLSLQLAISFSAREESLGL----AQV--S--YQN-VASK---------SIAQSIKKQFSDLIATIGEESISYPLTWL 344 (574)
Q Consensus 283 ~ai~~~~~~~~~~~lpEt~~~~----~~~--~--~~~-~~~~---------~~~~~~~~~~~~~~~~~~~~~v~~~~l~~ 344 (574)
.+++.++..+..++.|++-+.. ... + +++ .+++ ......++..+.++++++||.+....+-.
T Consensus 235 ~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~ 314 (539)
T PF03137_consen 235 CGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAG 314 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHH
Confidence 3333333333333444332211 000 0 000 0000 01123445556677888999876655544
Q ss_pred HhHhhhcccccccceeehccccCCCchhHHHHH-HHHHHHHHHHHHHHHHHHhcCC--chhHHHHHHHHHHHHHhH--HH
Q 008185 345 VASVAMVPVLSGSMFCYQTQCLNINPSVIGMSR-VIGQSMLLSLTVFYDRYWKKVP--LRKLVGAVQILYASSLLL--DL 419 (574)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~-i~~~ig~lig~~l~~~l~~r~~--~r~ll~~~~ll~~~~~l~--~l 419 (574)
.........+.+..|-|...+++.++...+++. +....+..+|.++.+.+.||+. .|++..++.+...+..+. ..
T Consensus 315 ~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~ 394 (539)
T PF03137_consen 315 VFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPL 394 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 443333444555556678888999988776652 3333344445555555555543 334333332222221111 11
Q ss_pred Hhhh--h-----hhccc-----------------------------Cc-C-c---ceE-EeehhHHHHHHHHhhHHHHHH
Q 008185 420 ILVR--Q-----INLQF-----------------------------GV-P-N---EVF-VLCFAGLAETLAQFKLLPFSM 457 (574)
Q Consensus 420 ~l~~--~-----~~~~~-----------------------------~~-~-~---~~~-~l~~~~l~~~~~~~~~~p~~~ 457 (574)
++.. . .+... +. + + .+. .+....+..++.....+|...
T Consensus 395 ~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~ 474 (539)
T PF03137_consen 395 FFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTL 474 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchhe
Confidence 1111 0 00000 00 0 0 011 111111222233445566666
Q ss_pred HHHhhcCCChhHHHHHHHHHHHH-hHHHHHHHHHHHHHHh
Q 008185 458 LLARLCPQGCEGSLTSFSASALC-LSSIASGFLGVGLASL 496 (574)
Q Consensus 458 l~~~~~p~~~~gt~~gl~~~~~~-lg~~lg~~i~g~l~~~ 496 (574)
..-+.+|+++|+.+.|+...+.. +|..-||++.|.+.|.
T Consensus 475 i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 475 ITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ----------------------------------------
T ss_pred eeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 66688899999999999887765 5667788888887774
No 127
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.10 E-value=9.1e-10 Score=117.99 Aligned_cols=149 Identities=11% Similarity=0.079 Sum_probs=109.4
Q ss_pred hHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHH
Q 008185 150 STLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASIT 228 (574)
Q Consensus 150 ~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~ 228 (574)
.+.+...++..+..++ .++.|+++||+ +||+.+.++.++..+.+.++.....+......+++..++.+++.+..
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~-----g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~ 325 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRF-----GIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFF 325 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHH
Confidence 5567777777665544 67889999985 56667777777766666555553222111233455677777777666
Q ss_pred HHHHHHHHHhhhcccCccchHHHHH-HHHHHHHHHHHHHHHHhhcc------CChhHHHHHHHHHHHHHHHHh-hhcccc
Q 008185 229 EVAKDALVAEYGQKNGIVGLQSYAF-MAAASGGILGNLFGGYFLLK------TPPTTMFLVFAVLLSLQLAIS-FSAREE 300 (574)
Q Consensus 229 ~~~~~a~i~d~~~~~~rg~~~s~~~-~~~~~G~~igp~igg~l~~~------~gwr~~f~i~ai~~~~~~~~~-~~lpEt 300 (574)
.+....++.|..|+++|++++++.+ ....+|.++||+++|++.+. .||+++|++.+++.++..++. +++||+
T Consensus 326 ~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 326 NISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 6666788899999999999999986 56779999999999999886 469999999988887776664 578887
Q ss_pred ccc
Q 008185 301 SLG 303 (574)
Q Consensus 301 ~~~ 303 (574)
...
T Consensus 406 ~~~ 408 (418)
T TIGR00889 406 HNA 408 (418)
T ss_pred ccC
Confidence 543
No 128
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.09 E-value=5.4e-10 Score=98.98 Aligned_cols=128 Identities=27% Similarity=0.337 Sum_probs=98.9
Q ss_pred hhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 008185 164 VAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKN 243 (574)
Q Consensus 164 ~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~ 243 (574)
...|+.|+++||+ +||+.+..+.....++........+ .+.+.+.+++.+++.+.......+++.|..+++
T Consensus 13 ~~~~~~g~~~d~~-----g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 13 IYSPLSGLLTDRF-----GRKPVLLVGLFIFVLSTAMFALSSN----ITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred HHHhhHHHHHhhc-----chhHHHHHHHHHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 3478899999985 4555555566665666555544432 455667788888888877777788899999999
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHh-hhcccc
Q 008185 244 GIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAIS-FSAREE 300 (574)
Q Consensus 244 ~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~-~~lpEt 300 (574)
+|++.+++.+....+|..+||.+++.+.+..+|++.|++.++...+..+.. ++.||+
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999999999999998999999999887777666654 345653
No 129
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.07 E-value=1.4e-09 Score=116.46 Aligned_cols=146 Identities=8% Similarity=-0.026 Sum_probs=105.8
Q ss_pred CCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHH
Q 008185 146 SLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLG 224 (574)
Q Consensus 146 ~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g 224 (574)
+.+..+.+++.++..+..++ .+++|+++||+ +||+.+..+.++..+.+.+.++.. + .+.+++.+++.+++
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~~~~~~l~~~~~~l~~~~~-~---~~~~~~~~~l~g~~ 328 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-----GAKNALLLAGTIMAVRIIGSGFAT-G---PLEVSILKLLHAFE 328 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcchhhHHHHHHHHHHHHHHHhcc-c---HHHHHHHHHHHHHH
Confidence 56777888888888776554 77899999985 344455556666666666555543 2 34456667777777
Q ss_pred HHHHHHHHHHHHHhhhcccCccchHHH-HHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHh-hhcccc
Q 008185 225 ASITEVAKDALVAEYGQKNGIVGLQSY-AFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAIS-FSAREE 300 (574)
Q Consensus 225 ~~~~~~~~~a~i~d~~~~~~rg~~~s~-~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~-~~lpEt 300 (574)
.+........++.|..+++.++...+. ++....+|.++||.++|++.+..|||.+|++.+++.++..++. +.++++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 329 VPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 666555556777888888888776654 5667789999999999999999999999999888877666554 345553
No 130
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.06 E-value=2.3e-09 Score=112.15 Aligned_cols=170 Identities=17% Similarity=0.069 Sum_probs=106.3
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
..+..+...... ......+.++++++|.+..+.++..+...+...+ .++.|+++||+ + ||+..+........++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~-~~~~~~~~~~~~~~~~ 295 (399)
T TIGR00893 220 LALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL---L-RRGKSLVFARKTAIIA 295 (399)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH---h-hcccchhHHHHHHHHH
Confidence 333344333332 3333445577888899999999988887776554 77899999986 2 3331111111111111
Q ss_pred ---HHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccC
Q 008185 198 ---WGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKT 274 (574)
Q Consensus 198 ---~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~ 274 (574)
.................+....+...+.+ ..+...+++.|..++++|+.++++.+....+|..+||.+.|++.+..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~ 374 (399)
T TIGR00893 296 GLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT 374 (399)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC
Confidence 11111111101112222223333333333 44556788899999999999999999999999999999999999988
Q ss_pred C-hhHHHHHHHHHHHHHHHHh
Q 008185 275 P-PTTMFLVFAVLLSLQLAIS 294 (574)
Q Consensus 275 g-wr~~f~i~ai~~~~~~~~~ 294 (574)
| |++.|++.++..++..+..
T Consensus 375 g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 375 GSFAGALMVVAALALIGALSY 395 (399)
T ss_pred CchhHHHHHHHHHHHHHHHHH
Confidence 8 9999999887776665543
No 131
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.04 E-value=4e-09 Score=114.18 Aligned_cols=162 Identities=12% Similarity=-0.048 Sum_probs=99.6
Q ss_pred hhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccch-hHhHHHHHHHHHHHHhhcccCccchHH
Q 008185 135 LALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIP-YICIGVFLQILSWGPLALFPVAAKALP 212 (574)
Q Consensus 135 ~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~-~l~i~~~~~~~~~~~~~~~~~~~~~~~ 212 (574)
...|.+++++.|.+..+.++...++.++..+ .++.|+++||+ +.+||. ..++...+..++..++.....+ ...
T Consensus 274 ~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~---~~~r~~~~~~~~~~l~~~~~~~~~~~~~~--~~~ 348 (452)
T PRK11273 274 DWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV---FRGNRGATGVFFMTLVTIATIVYWLNPAG--NPT 348 (452)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccCCcchHHHHHHHHHHHHHHHHHHhccc--ChH
Confidence 3455678888899999998888777776655 77899999985 213332 2222222222222222222111 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHH-HHHHHHHHhhccCChhHHHHHHHHHHHHHH
Q 008185 213 NLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGI-LGNLFGGYFLLKTPPTTMFLVFAVLLSLQL 291 (574)
Q Consensus 213 ~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~-igp~igg~l~~~~gwr~~f~i~ai~~~~~~ 291 (574)
..+++.++.+.+.............|..|+++||.++++.+....+|.. +||.++|++.+..||++.|+++++..++..
T Consensus 349 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~ 428 (452)
T PRK11273 349 VDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAV 428 (452)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 2223333322222111122234567899999999999998887777754 589999999999999999999888776665
Q ss_pred HHhh--hccccc
Q 008185 292 AISF--SAREES 301 (574)
Q Consensus 292 ~~~~--~lpEt~ 301 (574)
+... ..+|++
T Consensus 429 ~~~~~~~~~~~~ 440 (452)
T PRK11273 429 ILLIVVMIGEKR 440 (452)
T ss_pred HHHHHHhccccc
Confidence 5543 344543
No 132
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.04 E-value=1.8e-09 Score=117.32 Aligned_cols=218 Identities=14% Similarity=0.009 Sum_probs=120.0
Q ss_pred cccCccccccccccccccCCcCCCCCCcccccccccccccccchhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCCh
Q 008185 71 LVTTTESSSVSLKESKRLGSWAGGGGDEERRRDFGEVGINNFNKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHP 149 (574)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~v~w~~~~d~~np~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~ 149 (574)
.|+|+.|+.++++|++++.+-..+++.+.+...+.+. .+++...+.+.+.+++..+.. ....-+|.++++++|.+.
T Consensus 220 ~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~ 296 (465)
T TIGR00894 220 ADDPSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKA---IPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSG 296 (465)
T ss_pred cCCcccCCCCCHHHHHHHHhhcccccCCCCCCCCHHH---HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCh
Confidence 3778888888777766653321111111111122221 224444444556665555443 223334557888899999
Q ss_pred hHHHHHHHHhhhhhhh-hhhheeeccccccCCCccch-h--Hh--HHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHH
Q 008185 150 STLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIP-Y--IC--IGVFLQILSWGPLALFPVAAKALPNLMACVLLSNL 223 (574)
Q Consensus 150 ~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~-~--l~--i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~ 223 (574)
.+.++..++..+...+ .++.|+++||...++..++. . +. ++.....+..........+ ....+++..+.+.
T Consensus 297 ~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~ 373 (465)
T TIGR00894 297 KENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAA---FYLTIIILTLANA 373 (465)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCc---hHHHHHHHHHHHH
Confidence 9999988887776544 78899999986322211111 1 11 1111111111111111111 2222233333333
Q ss_pred HHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccC---ChhHHHHHHHHHHHHHHHHhh
Q 008185 224 GASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKT---PPTTMFLVFAVLLSLQLAISF 295 (574)
Q Consensus 224 g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~---gwr~~f~i~ai~~~~~~~~~~ 295 (574)
+.+...........|..+ +.+|.++++.+....+|+.++|.+.|++.+.. +|+..|++.++..++..++..
T Consensus 374 ~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 374 VSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred HhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 322222222233446655 47899999999999999999999999887643 388999998877766655543
No 133
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.03 E-value=7.7e-09 Score=108.37 Aligned_cols=153 Identities=14% Similarity=0.093 Sum_probs=106.2
Q ss_pred hHHHHHHhcCCChhHHHHHHHHhhhhhh-hhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHH
Q 008185 137 LNFHMAHNLSLHPSTLQLVQNSGNLPMV-AKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLM 215 (574)
Q Consensus 137 ~~~~l~~~~~~s~~~~~l~~s~~~l~~~-~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 215 (574)
.+.++.+++|.++.+.++..+...+... ..++.|+++||+ +||+.+.++.+...+........ ++ .+.++
T Consensus 222 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-----g~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~ 292 (375)
T TIGR00899 222 MPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-----GKRRLMLLAALAGVAFYTGLAAD-NS---LWALL 292 (375)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-----cchhHHHHHHHHHHHHHHHHHHH-HH---HHHHH
Confidence 4456777899999999987766554333 367889999985 45555554544444333333222 22 33344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHhh
Q 008185 216 ACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAISF 295 (574)
Q Consensus 216 ~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~~ 295 (574)
+.+++.+++.+...+.....+.|..|+ +++.++++++....+|..+||.++|.+.+..||+..|++.++..++..+..+
T Consensus 293 ~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 293 MLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 556666666555555555667787764 5678899998888899999999999999999999999999887777666666
Q ss_pred hccc
Q 008185 296 SARE 299 (574)
Q Consensus 296 ~lpE 299 (574)
++||
T Consensus 372 ~~~~ 375 (375)
T TIGR00899 372 LIKD 375 (375)
T ss_pred eecC
Confidence 6654
No 134
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.02 E-value=3.1e-09 Score=110.87 Aligned_cols=142 Identities=19% Similarity=0.182 Sum_probs=102.6
Q ss_pred HHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHH
Q 008185 142 AHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLL 220 (574)
Q Consensus 142 ~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 220 (574)
.+++|.+..+.++..++..+...+ .++.|+++||+ +||+.+.++..+..++..++...+... ...+++..++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 304 (377)
T TIGR00890 232 GQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-----GRQKTMSIVFGISAVGMAAMLFIPMLN--DVLFLATVAL 304 (377)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhhhhhHHHHHHHHHHHHHHHcccch--hHHHHHHHHH
Confidence 345889988888888887776655 77899999985 455556556666666655554443221 1112233444
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHH
Q 008185 221 SNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQ 290 (574)
Q Consensus 221 ~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~ 290 (574)
.+++.+.......+++.|..++++|+.++++.+....+|..+||.++|.+.+..||++.|++.+++.++.
T Consensus 305 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 305 VFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 4444444444456778899999999999999999999999999999999999999999999987766554
No 135
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.99 E-value=4.3e-09 Score=110.43 Aligned_cols=148 Identities=21% Similarity=0.122 Sum_probs=98.4
Q ss_pred hhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHh-hcccCccchH
Q 008185 134 WLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPL-ALFPVAAKAL 211 (574)
Q Consensus 134 ~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~-~~~~~~~~~~ 211 (574)
....+.++++++|.+..+.+...+...+...+ .++.|+++||+ | ||+.++..+.+....++... ...... ..
T Consensus 239 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~---g-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 312 (394)
T TIGR00883 239 TTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI---G-RRPVLIIFTVLAALLAVPLLMALLDSG--SF 312 (394)
T ss_pred HHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh---c-hHHHHHHHHHHHHHHHHHHHHHHhcCC--ch
Confidence 33455577777899999999888777776544 78899999985 2 44433322322222221211 121111 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHH-HHHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHH
Q 008185 212 PNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYA-FMAAASGGILGNLFGGYFLLKTP-PTTMFLVFAVLL 287 (574)
Q Consensus 212 ~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~-~~~~~~G~~igp~igg~l~~~~g-wr~~f~i~ai~~ 287 (574)
..+++..++.+++.+.......+++.|..|+++|+.++++. ..+..+|..++|.++|++.+..| |++.++..++..
T Consensus 313 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 313 TLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 33344455555665555666778899999999999998874 45566899999999999999888 998887776544
No 136
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.99 E-value=8.6e-09 Score=110.24 Aligned_cols=157 Identities=11% Similarity=0.066 Sum_probs=115.1
Q ss_pred hHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHH
Q 008185 137 LNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLM 215 (574)
Q Consensus 137 ~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 215 (574)
.+.+.++.+|.++.+.+++.+...++..+ .++.|+++|+. +++..+..+....++.+.++...++ ...+.
T Consensus 246 ~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~ 316 (417)
T PRK10489 246 YPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-----RPGLLMLLSTLGSFLAVGLFGLMPM----WILAV 316 (417)
T ss_pred hHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-----CcchHHHHHHHHHHHHHHHHHccch----HHHHH
Confidence 44577777899999999988888777655 66788999862 4444455555555555555444332 33344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHh-
Q 008185 216 ACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAIS- 294 (574)
Q Consensus 216 ~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~- 294 (574)
++.++.+++.+...+...+++.|..|++.||++++++.....+|..+||.++|++.+..|++..+++.++...+..++.
T Consensus 317 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 396 (417)
T PRK10489 317 LCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLL 396 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Confidence 5555666776666666667888999988999999999998999999999999999999999999998877766665554
Q ss_pred hhcccccc
Q 008185 295 FSAREESL 302 (574)
Q Consensus 295 ~~lpEt~~ 302 (574)
+.+||++.
T Consensus 397 ~~~~~~~~ 404 (417)
T PRK10489 397 LVLGELRR 404 (417)
T ss_pred Hhcccccc
Confidence 56677653
No 137
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.99 E-value=3.2e-07 Score=97.53 Aligned_cols=235 Identities=16% Similarity=0.102 Sum_probs=132.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHH-hhhcccccccc--c--ccchhcc--h-----
Q 008185 246 VGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAI-SFSAREESLGL--A--QVSYQNV--A----- 313 (574)
Q Consensus 246 g~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~-~~~lpEt~~~~--~--~~~~~~~--~----- 313 (574)
.++.+...-.-.+.-++||++.|.+....+.+...++.++..++...+ .+++...+... . ++++++. .
T Consensus 148 a~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~ 227 (432)
T PF06963_consen 148 ARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEES 227 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccc
Confidence 334444444456788999999999998889999988888888877766 33332211110 0 0000000 0
Q ss_pred ------hhhhhhhHHH----HHHHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHH
Q 008185 314 ------SKSIAQSIKK----QFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSM 383 (574)
Q Consensus 314 ------~~~~~~~~~~----~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig 383 (574)
.....+..++ ..+.++..+++|. +.+.+-+.+.|.....+...+.-|... .|+++..+|.+...+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~v-flas~alalLY~TVLsf~~lmt~yl~~-~G~s~~~igi~R~~gav~ 305 (432)
T PF06963_consen 228 SSESSSDPSILKRLWNPLRTIIRGWRTYFRQPV-FLASFALALLYFTVLSFGGLMTAYLKS-QGYSPSVIGIFRGLGAVF 305 (432)
T ss_pred cccccchhhHHHHHHHHHHHHhccHHHHHhCHH-HHHHHHHHHHHHHHhcCcHHHHHHHHH-CCCCHHHHHHHHHHHHHH
Confidence 0001111111 2222333455554 444443333366555555444445544 499999999999999999
Q ss_pred HHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhH----HHHHHHH
Q 008185 384 LLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKL----LPFSMLL 459 (574)
Q Consensus 384 ~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~p~~~l~ 459 (574)
.+.|++++.++.+|+|..+.-.++......+..+..... +. .+.+..............+.-+.+ +...-++
T Consensus 306 Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~--~~--~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~ 381 (432)
T PF06963_consen 306 GLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSF--WA--PGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIM 381 (432)
T ss_pred HHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHH--hc--CCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhh
Confidence 999999999999999988877766655544433322111 11 011101100000000111111111 2223457
Q ss_pred HhhcCCChhHHHHHHHHHHHHhHHHHH
Q 008185 460 ARLCPQGCEGSLTSFSASALCLSSIAS 486 (574)
Q Consensus 460 ~~~~p~~~~gt~~gl~~~~~~lg~~lg 486 (574)
+|..|+++||+..|.-++.+++.-.+.
T Consensus 382 Qe~V~~~~Rg~v~gvq~sl~~lf~ll~ 408 (432)
T PF06963_consen 382 QENVPESERGAVSGVQNSLQSLFELLS 408 (432)
T ss_pred cccCCHHHhhHHHHHHHHHHHHHHHHH
Confidence 888999999999999999998776544
No 138
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.98 E-value=4.1e-09 Score=108.59 Aligned_cols=175 Identities=18% Similarity=0.079 Sum_probs=127.2
Q ss_pred chhHHHHHHHHHHHhhh-cc--chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhhhh-hheeeccccccCCCccchhHh
Q 008185 113 NKQMLVLCGLGYWVQGF-RC--FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVAKP-LYGILSDALYIGGAHRIPYIC 188 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~-~~--~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~p-l~G~lsD~~~~~G~rRk~~l~ 188 (574)
++.+|. +++.++...+ .+ ..|.++ |+.|.-|.|...+.+..+++=++...++ ++|++||++ ++.||.|.-+
T Consensus 251 Nk~iW~-la~a~vfvYivR~gi~dW~p~--YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDkl--fkgrR~p~~~ 325 (448)
T COG2271 251 NKLIWL-LALANVFVYVVRYGINDWGPL--YLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKL--FKGRRGPMAL 325 (448)
T ss_pred ChHHHH-HHHHHHHHHHHHHHHhhhHHH--HHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHh--cccccchHHH
Confidence 444555 6666654444 44 566665 7888899999999999999988777766 689999986 4458888877
Q ss_pred HHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHH-HHHHHHHHH
Q 008185 189 IGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAAS-GGILGNLFG 267 (574)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~-G~~igp~ig 267 (574)
+..+...++.......++. +.....++.++.++-.-......+....|..|++-.|.+.|+......+ |.+++...-
T Consensus 326 i~~~~i~~~~~~~w~~~~~--~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~ 403 (448)
T COG2271 326 IFMLLITASLVLYWLAPNG--SYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPL 403 (448)
T ss_pred HHHHHHHHHHHHHHcCCCc--cHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcc
Confidence 7777777777767666643 2333344444444333333344556678999999999999988888887 888888888
Q ss_pred HHhhccCChhHHHHHHHHHHHHHHHHh
Q 008185 268 GYFLLKTPPTTMFLVFAVLLSLQLAIS 294 (574)
Q Consensus 268 g~l~~~~gwr~~f~i~ai~~~~~~~~~ 294 (574)
|++.+.+||...|.+..+.+++..++.
T Consensus 404 g~i~d~~gW~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 404 GYIADTWGWDGGFIVLSIAALLAILLL 430 (448)
T ss_pred eeeEecCCCcchHHHHHHHHHHHHHHH
Confidence 888888999999999877776665553
No 139
>PRK09952 shikimate transporter; Provisional
Probab=98.98 E-value=1.3e-08 Score=109.73 Aligned_cols=160 Identities=11% Similarity=0.072 Sum_probs=99.3
Q ss_pred hHHHHHHhcCCChhHHHHHHHHhhhh-hhhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHH
Q 008185 137 LNFHMAHNLSLHPSTLQLVQNSGNLP-MVAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLM 215 (574)
Q Consensus 137 ~~~~l~~~~~~s~~~~~l~~s~~~l~-~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 215 (574)
.+.++++++|.+......+..+..+. ....|++|+++||+ +||+.+..+.++..++...+............++
T Consensus 273 ~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-----grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (438)
T PRK09952 273 ALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-----GRRRVYITGALIGTLSAFPFFMALEAQSIFWIVF 347 (438)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHH
Confidence 34477777898887554433333332 23477899999985 4555555554443333322211110111122223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHH-HHHHHHHHHHHHHHHhhccC--ChhHHHHHHHHHHHHHHH
Q 008185 216 ACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFM-AAASGGILGNLFGGYFLLKT--PPTTMFLVFAVLLSLQLA 292 (574)
Q Consensus 216 ~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~-~~~~G~~igp~igg~l~~~~--gwr~~f~i~ai~~~~~~~ 292 (574)
+..++.+++.+.......++++|..|.+.|+...++.+. +..+|+.++|.+.|++.+.. +|+..+...++..++..+
T Consensus 348 ~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v 427 (438)
T PRK09952 348 FSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAM 427 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHH
Confidence 334444555555555567889999999999888887544 44589999999999998743 488888888777766666
Q ss_pred Hhhhccccc
Q 008185 293 ISFSAREES 301 (574)
Q Consensus 293 ~~~~lpEt~ 301 (574)
..+.+||+.
T Consensus 428 ~~~~~~~~~ 436 (438)
T PRK09952 428 TALLMKDNQ 436 (438)
T ss_pred HHHHccccc
Confidence 666677753
No 140
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.97 E-value=1e-08 Score=105.58 Aligned_cols=154 Identities=26% Similarity=0.262 Sum_probs=122.0
Q ss_pred hhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccch-hHhHHHHHHHHHHHHhhcccCccchH
Q 008185 134 WLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIP-YICIGVFLQILSWGPLALFPVAAKAL 211 (574)
Q Consensus 134 ~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~-~l~i~~~~~~~~~~~~~~~~~~~~~~ 211 (574)
....+.+.++.+|.+..+.++..+...++..+ .+++|+++||+ +||+ .+.++..+..++........+ .
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~----~ 265 (352)
T cd06174 195 LTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-----GRRRLLLLIGLLLAALGLLLLALAPS----L 265 (352)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhhhHHHHHHHHHHHHHHHHHHHhcc----H
Confidence 33445566776799999999998888877655 77899999985 4555 666677776777666655532 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHH
Q 008185 212 PNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQL 291 (574)
Q Consensus 212 ~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~ 291 (574)
..+.+..++.+++.+...+....++.|..|+++|++.+++.+....+|..++|.++|.+.+..+|++.|++.+++.++..
T Consensus 266 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~ 345 (352)
T cd06174 266 ALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAA 345 (352)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Confidence 44566677777887777777888999999999999999999999999999999999999998999999999988887776
Q ss_pred HHhhh
Q 008185 292 AISFS 296 (574)
Q Consensus 292 ~~~~~ 296 (574)
+..++
T Consensus 346 i~~~~ 350 (352)
T cd06174 346 LLLLL 350 (352)
T ss_pred HHhee
Confidence 65543
No 141
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.96 E-value=1.8e-08 Score=111.30 Aligned_cols=278 Identities=17% Similarity=0.135 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHH
Q 008185 116 MLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFL 193 (574)
Q Consensus 116 ~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~ 193 (574)
+++++++.++.+++.. .....+. .+.+.|+++..+.|++.+.+-++-.+ .-+.++..-| ++|..++-+|.++
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~It-tiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r-----~HrPr~Ig~G~~~ 171 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVIT-TIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSR-----GHRPRWIGIGLVL 171 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhh-hhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccc-----cCccceeeechhH
Confidence 4444777778888876 3333333 56777999999999988888776544 3334455444 3677788778887
Q ss_pred HHHHHHHhhcccC-----------------cc-----------------------------ch-HH-HHHHHHHHHHHHH
Q 008185 194 QILSWGPLALFPV-----------------AA-----------------------------KA-LP-NLMACVLLSNLGA 225 (574)
Q Consensus 194 ~~~~~~~~~~~~~-----------------~~-----------------------------~~-~~-~l~~~~~l~~~g~ 225 (574)
+++..++.++..- +. .+ .+ .+++.-++.|+|.
T Consensus 172 m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~ 251 (735)
T KOG3626|consen 172 MGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGA 251 (735)
T ss_pred HHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCC
Confidence 7777666655300 00 00 11 1233355668888
Q ss_pred HHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhcc-------------CChhH------HHHHHHHH
Q 008185 226 SITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLK-------------TPPTT------MFLVFAVL 286 (574)
Q Consensus 226 ~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~-------------~gwr~------~f~i~ai~ 286 (574)
+......-.++-|..++++-....|+.+....+||++|-++|+++... .+.|| =|.+.+++
T Consensus 252 Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~ 331 (735)
T KOG3626|consen 252 TPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGAL 331 (735)
T ss_pred CCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHH
Confidence 887777778888998888888888999999999999999999988642 12343 35555555
Q ss_pred HHHHHHHhhhcccccccccc-cchhc------c-----hhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccc
Q 008185 287 LSLQLAISFSAREESLGLAQ-VSYQN------V-----ASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVL 354 (574)
Q Consensus 287 ~~~~~~~~~~lpEt~~~~~~-~~~~~------~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~ 354 (574)
.++..+..|+.|.+.....+ .++++ . .+.+....+++..+.++++++||.+...++...+-......+
T Consensus 332 ~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~ 411 (735)
T KOG3626|consen 332 LLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGY 411 (735)
T ss_pred HHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhH
Confidence 55555555666655433211 00000 0 011223345667778888999998776655444322223334
Q ss_pred cccceeehccccCCCchhHHHHH-HHHHHHHHHHHHHHHHHHhcCC
Q 008185 355 SGSMFCYQTQCLNINPSVIGMSR-VIGQSMLLSLTVFYDRYWKKVP 399 (574)
Q Consensus 355 ~~~~~~~~~~~~g~s~~~~gl~~-i~~~ig~lig~~l~~~l~~r~~ 399 (574)
.+.+|=|....+|.++..+.++. .....+..+|.++.+++.||+.
T Consensus 412 ~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfk 457 (735)
T KOG3626|consen 412 ITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFK 457 (735)
T ss_pred HHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeec
Confidence 44456677788999988777653 3344445556666677777754
No 142
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.95 E-value=1.6e-08 Score=108.83 Aligned_cols=159 Identities=19% Similarity=0.106 Sum_probs=99.7
Q ss_pred hHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHH
Q 008185 137 LNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLM 215 (574)
Q Consensus 137 ~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 215 (574)
.+.++++++|.+..+.++..+++.++..+ .++.|+++||+. +.+|++......+...++...+...+... ...+.
T Consensus 266 ~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 341 (434)
T PRK11663 266 GNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLF--NGNRGPMNLIFAAGILLSVGSLWLMPFAS--YVMQA 341 (434)
T ss_pred HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhc--cCCccHHHHHHHHHHHHHHHHHHHccccc--HHHHH
Confidence 34577777899999999988888777665 667899999852 11233322221111111111111112111 12222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHhh
Q 008185 216 ACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAISF 295 (574)
Q Consensus 216 ~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~~ 295 (574)
+..+..+++...........+.|..++++|+..+++.+....+|.++||.+.|++.+..||+..|++.+++.++..+..+
T Consensus 342 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 342 ACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 22222222211111122344678888889999999999999999999999999999999999999999888777665543
Q ss_pred -hccc
Q 008185 296 -SARE 299 (574)
Q Consensus 296 -~lpE 299 (574)
+.++
T Consensus 422 ~~~~~ 426 (434)
T PRK11663 422 PFLNA 426 (434)
T ss_pred HHHhh
Confidence 3444
No 143
>PRK03545 putative arabinose transporter; Provisional
Probab=98.94 E-value=2.4e-08 Score=105.75 Aligned_cols=148 Identities=14% Similarity=-0.018 Sum_probs=101.7
Q ss_pred hHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHH
Q 008185 137 LNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLM 215 (574)
Q Consensus 137 ~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 215 (574)
.++++++++|.+..+.+++.++..++..+ .++.|+++||+ +||..+ .+..+..++...+....++ ...++
T Consensus 228 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----~~~~~~-~~~~~~~~~~~~l~~~~~~---~~~~~ 298 (390)
T PRK03545 228 IEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-----PSGFLL-IAIALLLVCLLLLLPAANS---EWHLS 298 (390)
T ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-----chhHHH-HHHHHHHHHHHHHHHHhch---HHHHH
Confidence 34466777899999999888877766555 67789999984 344443 3333333333322222222 33344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHh
Q 008185 216 ACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAIS 294 (574)
Q Consensus 216 ~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~ 294 (574)
++.++.+++.........+.+.|..+ ++|++++++++....+|..+||+++|.+.+..|++.+|++.+++.++..+..
T Consensus 299 ~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~ 376 (390)
T PRK03545 299 VLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWS 376 (390)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHH
Confidence 55555555554444444555666655 6789999998888899999999999999999999999999988887766654
No 144
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.91 E-value=2.3e-08 Score=106.20 Aligned_cols=134 Identities=16% Similarity=0.167 Sum_probs=96.4
Q ss_pred HHHHHHhhhhh-hhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHH
Q 008185 153 QLVQNSGNLPM-VAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVA 231 (574)
Q Consensus 153 ~l~~s~~~l~~-~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~ 231 (574)
+++.++..++. ...|++|+++||+ +||+.+..+.....+.........+ .+.+++.+++.+++.+...+.
T Consensus 261 g~~~~~~~l~~~~~~~~~g~l~dr~-----g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~ 331 (408)
T PRK09874 261 GMIASVPGVAALLSAPRLGKLGDRI-----GPEKILITALIFSVLLLIPMSFVQT----PLQLGILRFLLGAADGALLPA 331 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-----ccchhHHHHHHHHHHHHHHHHHhcc----HHHHHHHHHHHHhhhHhhHHH
Confidence 44444444444 3477899999985 4555555565555555544443322 334455666667776666666
Q ss_pred HHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHhh
Q 008185 232 KDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAISF 295 (574)
Q Consensus 232 ~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~~ 295 (574)
....+.+..+++++|+.+++.+....+|..+||.++|.+.+..||++.|++.+++.++..+..+
T Consensus 332 ~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 332 VQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 6677778888889999999999999999999999999999999999999999888777666554
No 145
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.90 E-value=1.7e-08 Score=108.85 Aligned_cols=160 Identities=11% Similarity=-0.042 Sum_probs=97.9
Q ss_pred hHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHH-HHHHHHHHhhcccCccchHHHH
Q 008185 137 LNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVF-LQILSWGPLALFPVAAKALPNL 214 (574)
Q Consensus 137 ~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~-~~~~~~~~~~~~~~~~~~~~~l 214 (574)
.+.+++++.|.++.+.++...++.+...+ .++.|+++||+ +.+|+........ ...++.......+.. .....
T Consensus 274 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 348 (438)
T TIGR00712 274 SPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV---FKGNRGATGVFFMTLVTIAVIVYWMNPAG--NPLVD 348 (438)
T ss_pred HHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh---ccCcccHHHHHHHHHHHHHHHHHHhcCCC--chHHH
Confidence 45577877899999999888877766554 77899999985 2233333211111 111111111111111 11112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHH-HHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHH
Q 008185 215 MACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASG-GILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAI 293 (574)
Q Consensus 215 ~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G-~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~ 293 (574)
.+..++.+++.............|..++++||.++++.+....+| .++||.++|.+.+..||.+.|++.++..++..+.
T Consensus 349 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 428 (438)
T TIGR00712 349 MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVIL 428 (438)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 222222222211111111234678888899999999988777766 5789999999999999999999988777666665
Q ss_pred h-hhccccc
Q 008185 294 S-FSAREES 301 (574)
Q Consensus 294 ~-~~lpEt~ 301 (574)
. +++||++
T Consensus 429 ~~~~~~~~~ 437 (438)
T TIGR00712 429 LIVVMIGEK 437 (438)
T ss_pred HHHHHhhcc
Confidence 4 5678764
No 146
>PRK10054 putative transporter; Provisional
Probab=98.90 E-value=1.9e-08 Score=107.06 Aligned_cols=130 Identities=17% Similarity=0.185 Sum_probs=90.2
Q ss_pred ceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEE
Q 008185 358 MFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFV 437 (574)
Q Consensus 358 ~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~ 437 (574)
++.|.++.+|+++.+.|+......++.+++....+++.||+++|+++..+.++..+..+. +.+.. +.+..
T Consensus 30 l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~-~~~~~---------~~~~~ 99 (395)
T PRK10054 30 MTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIA-IPLVN---------NVTLV 99 (395)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHH-HHHHh---------HHHHH
Confidence 344667789999999999988888888888899999999999999887776655444332 11211 11111
Q ss_pred eehhHHHHHHHHhhHHH-HHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 438 LCFAGLAETLAQFKLLP-FSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 438 l~~~~l~~~~~~~~~~p-~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
+....+.. .+.....| ...+..|..|++.|++++|+.+...++|.+++|.+++.+.+ .|+
T Consensus 100 ~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~ 160 (395)
T PRK10054 100 VLFFALIN-CAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSI 160 (395)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcc
Confidence 11111111 11111222 34667889999999999999999999999999999998875 443
No 147
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.90 E-value=3.3e-08 Score=104.89 Aligned_cols=150 Identities=15% Similarity=0.062 Sum_probs=104.7
Q ss_pred HHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHH
Q 008185 140 HMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACV 218 (574)
Q Consensus 140 ~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 218 (574)
++.+ .|.+ ..++..+.+.++..+ .++.|+++||+ +||+.+..+..+..+++.++...+ + ...+++..
T Consensus 242 ~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~ 309 (399)
T PRK05122 242 YYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-----GGLRVAIVSLLVEILGLLLLWLAP-S---PWMALIGA 309 (399)
T ss_pred HHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHhc-c---HHHHHHHH
Confidence 4444 4553 345555556565555 67889999985 345555556555566655555443 2 23345556
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHhhhcc
Q 008185 219 LLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAISFSAR 298 (574)
Q Consensus 219 ~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~~~lp 298 (574)
++.+++.+...+.....+.|..++++||+++++++....+|..++|.+.|++.+..||++.|++.+++.++..+..++++
T Consensus 310 ~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 310 ALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66677766655555566778888899999999999999999999999999999989999999998887777666655555
Q ss_pred ccc
Q 008185 299 EES 301 (574)
Q Consensus 299 Et~ 301 (574)
+++
T Consensus 390 ~~~ 392 (399)
T PRK05122 390 RRA 392 (399)
T ss_pred ccc
Confidence 443
No 148
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.90 E-value=1.6e-08 Score=105.49 Aligned_cols=140 Identities=19% Similarity=0.081 Sum_probs=89.5
Q ss_pred hhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHH-HHHHHHHHHhhcccCccchHHH
Q 008185 136 ALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGV-FLQILSWGPLALFPVAAKALPN 213 (574)
Q Consensus 136 ~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~-~~~~~~~~~~~~~~~~~~~~~~ 213 (574)
..+.++++++|.++.+.++..+...++..+ .++.|+++||. +.+|+..+.... ....++.......... ....
T Consensus 238 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 312 (379)
T TIGR00881 238 WSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKL---FNGRRGPLAVFFMALIIVSLLVYWLNPAA--NPLM 312 (379)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHH---cCCcchHHHHHHHHHHHHHHHHHhcCcch--hHHH
Confidence 345577788899999999988888776655 67889999974 123332222111 1222222222221111 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 008185 214 LMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMF 280 (574)
Q Consensus 214 l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f 280 (574)
.+++.++.++...........++.|..|+++|+.++++.+....+|..+||.+.|++.+..||++.|
T Consensus 313 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 313 DLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 2333333333222223333566789999999999999999999999999999999999999999865
No 149
>PRK03699 putative transporter; Provisional
Probab=98.89 E-value=4.2e-08 Score=104.20 Aligned_cols=154 Identities=6% Similarity=-0.030 Sum_probs=102.4
Q ss_pred hhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHH
Q 008185 135 LALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPN 213 (574)
Q Consensus 135 ~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 213 (574)
.-.+.++++++|.++.+.++..+.+.++..+ .++.|.++||+ +||..+.....+.++...++...+ + ...
T Consensus 226 ~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-----~~~~~l~~~~~~~~~~~~~~~~~~-~---~~~ 296 (394)
T PRK03699 226 SWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-----DLQRILTVLAGLALVLMYLFVNTD-D---PSH 296 (394)
T ss_pred HHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-----chhhHHHHHHHHHHHHHHHHHHcC-C---chH
Confidence 3345578888999999999998888777665 66789999985 344444444444444444333332 2 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHH
Q 008185 214 LMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAI 293 (574)
Q Consensus 214 l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~ 293 (574)
+.+..++.+++.+.......+...|..+ ++++...+.......+|..+||.++|++.+..||+..|++.+++.++..+.
T Consensus 297 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 297 LLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence 3334444444444333333445556554 445667777777788999999999999999999999999998887777665
Q ss_pred hhhcc
Q 008185 294 SFSAR 298 (574)
Q Consensus 294 ~~~lp 298 (574)
.+..+
T Consensus 376 ~~~~~ 380 (394)
T PRK03699 376 CILLG 380 (394)
T ss_pred HHHHH
Confidence 44433
No 150
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.89 E-value=5e-08 Score=103.18 Aligned_cols=151 Identities=13% Similarity=0.103 Sum_probs=112.9
Q ss_pred hhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHH
Q 008185 135 LALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPN 213 (574)
Q Consensus 135 ~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 213 (574)
...+.++++ +|.++.++|++.++..+...+ .++.|.+.||+ +.|..+.++.+...+.+.+.+..++ .+.
T Consensus 226 ~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-----g~~~~l~~~~~~~~~~~~~~~~~~~----~~~ 295 (382)
T TIGR00902 226 GFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-----SARDLLLISAIACVGRWAIIGAIEA----FPL 295 (382)
T ss_pred HHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-----CHHHHHHHHHHHHHHHHHHHHhHhh----HHH
Confidence 344557765 899999999988876666554 66788899984 4566677788888888877765532 455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHH-HHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHH
Q 008185 214 LMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAF-MAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLA 292 (574)
Q Consensus 214 l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~-~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~ 292 (574)
+++..++.++..+...+....++.+. |+++++..+++++ ....+|.++||.++|++.+..|+ ..|++.+++.++..+
T Consensus 296 ~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 296 IFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 66678888887777777777778877 7788899999876 45679999999999999999986 778887777765544
Q ss_pred Hhhhc
Q 008185 293 ISFSA 297 (574)
Q Consensus 293 ~~~~l 297 (574)
+.+..
T Consensus 374 ~~~~~ 378 (382)
T TIGR00902 374 LIPKK 378 (382)
T ss_pred HHHhc
Confidence 43333
No 151
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.86 E-value=5.8e-08 Score=102.57 Aligned_cols=147 Identities=13% Similarity=0.184 Sum_probs=99.0
Q ss_pred hHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHH
Q 008185 137 LNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLM 215 (574)
Q Consensus 137 ~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 215 (574)
++.++++ .|.++.+.++..++..+..++ +.+.|+++||+ +||+.+..+..+..++..... .. ....
T Consensus 223 lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----~~~~~l~~~~~~~~~~~~~~~--~~-----~~~~ 289 (381)
T PRK03633 223 MPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-----GRLLVLRVQVFVVILGSIAML--SQ-----AAMA 289 (381)
T ss_pred HHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-----CcHHHHHHHHHHHHHHHHHHh--hh-----HHHH
Confidence 4446655 699999999888877766555 66789999985 556666555555444443322 11 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHhh
Q 008185 216 ACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAISF 295 (574)
Q Consensus 216 ~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~~ 295 (574)
..+++.+++.....+...+.+.|..++++++...+..+....+|..+||.++|++.++.||++.|.+.+.+.++..+..+
T Consensus 290 ~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 290 PALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 33344344333334455666778887777776777777788899999999999999999999999998777765544333
Q ss_pred h
Q 008185 296 S 296 (574)
Q Consensus 296 ~ 296 (574)
.
T Consensus 370 ~ 370 (381)
T PRK03633 370 R 370 (381)
T ss_pred h
Confidence 3
No 152
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.86 E-value=2.3e-08 Score=108.45 Aligned_cols=151 Identities=9% Similarity=0.053 Sum_probs=105.6
Q ss_pred hhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHH
Q 008185 136 ALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNL 214 (574)
Q Consensus 136 ~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l 214 (574)
.++.+.++ +|.+..+.++..++..++..+ +|+.|.++||... +.+|+..+..+.++..++.+++.... + .+.+
T Consensus 263 ~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~~~~~~~l~~ll~~~~~-~---~~~~ 336 (455)
T TIGR00892 263 FLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWI-RPHVQYLFSFALLFNGLTHLLCALAG-D---YTGL 336 (455)
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-CHHHHHHHHHHHHHHHHHHHHHHHhc-h---HHHH
Confidence 34445554 799999999998888776544 8899999997311 11222222223333333333333332 2 3445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccC-ChhHHHHHHHHHHHHHHH
Q 008185 215 MACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKT-PPTTMFLVFAVLLSLQLA 292 (574)
Q Consensus 215 ~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~-gwr~~f~i~ai~~~~~~~ 292 (574)
++.+++.+++.+.......+++.|..++++++..+++++....+|.++||.++|++.+.. +|++.|++.+++.++..+
T Consensus 337 ~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 337 VIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 566777677776666666788899999899999999999999999999999999998877 599999998877655443
No 153
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.84 E-value=7.9e-08 Score=102.39 Aligned_cols=155 Identities=14% Similarity=0.071 Sum_probs=100.2
Q ss_pred hHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccC-ccchHHHH
Q 008185 137 LNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPV-AAKALPNL 214 (574)
Q Consensus 137 ~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~-~~~~~~~l 214 (574)
.|.++++ +|.+..+.++..+...++..+ .++.|+++||+ + ||++....+.+...++...+...+. ...+...+
T Consensus 245 ~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~---~-~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~ 319 (402)
T TIGR00897 245 LPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL---G-WMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVA 319 (402)
T ss_pred HHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh---c-chhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHH
Confidence 4456654 899999988888877776555 77899999985 2 4444432222222222222221110 00112333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHh
Q 008185 215 MACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAIS 294 (574)
Q Consensus 215 ~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~ 294 (574)
+++.++.+++.+... .....+.|. ++++||.++++.+....+|..+||.++|.+.+..||+.+|++.++..++..++.
T Consensus 320 ~~~~~~~G~~~~~~~-~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~ 397 (402)
T TIGR00897 320 LIIAIALGIFLAGYV-PLAAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLT 397 (402)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Confidence 344444444444332 233455565 456899999999999999999999999999999999999999998877766665
Q ss_pred hhcc
Q 008185 295 FSAR 298 (574)
Q Consensus 295 ~~lp 298 (574)
.|++
T Consensus 398 ~~~~ 401 (402)
T TIGR00897 398 AFIR 401 (402)
T ss_pred HHhc
Confidence 5543
No 154
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.83 E-value=8.8e-08 Score=101.75 Aligned_cols=156 Identities=13% Similarity=0.026 Sum_probs=104.1
Q ss_pred hHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHH
Q 008185 137 LNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLM 215 (574)
Q Consensus 137 ~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 215 (574)
.+.++++ +|.+..+.+...+++.++..+ .++.|+++||+ +||+.+.++..+..++..++...+.+. ..+.
T Consensus 228 lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~ 298 (393)
T PRK09705 228 LPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-----DRRKLLMLALVLQLVGFCGFIWLPLQL---PVLW 298 (393)
T ss_pred HHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-----cchHHHHHHHHHHHHHHHHHHHccchH---HHHH
Confidence 3446665 799999999999988887666 67889999985 455555555555555544443333221 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc-ccCccchHHHHHHHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHHHHHH
Q 008185 216 ACVLLSNLGASITEVAKDALVAEYGQ-KNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTP-PTTMFLVFAVLLSLQLAI 293 (574)
Q Consensus 216 ~~~~l~~~g~~~~~~~~~a~i~d~~~-~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~g-wr~~f~i~ai~~~~~~~~ 293 (574)
.++.+++.+...+.......|..+ ++++++.+++.+....++..+||.+.|++.+..| |+..|++.++..++..+.
T Consensus 299 --~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK09705 299 --AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMII 376 (393)
T ss_pred --HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 223344433333333445566664 4678999999889889999999999999999876 778888877766666555
Q ss_pred h-hhccccccc
Q 008185 294 S-FSAREESLG 303 (574)
Q Consensus 294 ~-~~lpEt~~~ 303 (574)
. ++.||++..
T Consensus 377 ~~~~~~~~~~~ 387 (393)
T PRK09705 377 TLRFAPARFPQ 387 (393)
T ss_pred HHHhccccccc
Confidence 4 567887643
No 155
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.82 E-value=5.2e-08 Score=106.57 Aligned_cols=147 Identities=17% Similarity=0.150 Sum_probs=100.0
Q ss_pred hhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHH
Q 008185 136 ALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNL 214 (574)
Q Consensus 136 ~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l 214 (574)
.++.++++++|.+..+.+++.+...++..+ .++.|+++||+ +||+.++++.++..+........... ....+
T Consensus 297 ~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-----g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 369 (496)
T PRK03893 297 LLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-----GTRKAYVCSLLISQLLIIPVFAIGGA--NVWVL 369 (496)
T ss_pred HHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHhhcccc--HHHHH
Confidence 355677778999999999999888877665 66789999985 34444444544444443333222221 12222
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHH
Q 008185 215 MACVLLS-NLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQ 290 (574)
Q Consensus 215 ~~~~~l~-~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~ 290 (574)
.+..++. ..+.+. .....+++.|..++++|+..+++.+....+|..+||+++|++.+..||++.+++.++...+.
T Consensus 370 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~ 445 (496)
T PRK03893 370 GLLLFFQQMLGQGI-SGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFV 445 (496)
T ss_pred HHHHHHHHHHhccc-chhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHH
Confidence 2333332 223222 23445678899998999999999988889999999999999999999999887766544443
No 156
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.82 E-value=4.2e-06 Score=85.53 Aligned_cols=233 Identities=13% Similarity=0.063 Sum_probs=129.8
Q ss_pred HhcCCChhHHHHHHHHhhhh-hhhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHH
Q 008185 143 HNLSLHPSTLQLVQNSGNLP-MVAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLS 221 (574)
Q Consensus 143 ~~~~~s~~~~~l~~s~~~l~-~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 221 (574)
++.|.+..+++.+....... .+++|+.|.++||+ | |||-.+ +.+++..++.+.- .. ..+..+++.|+++
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~---G-rk~~cl-~~cily~~scl~k-~~----~~~~~L~~GRvlg 131 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY---G-RKKACL-LFCILYSLSCLTK-HS----SNYPVLLLGRVLG 131 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C-chHHHH-HHHHHHHHHHHHH-hc----cccHHHHHHHHHH
Confidence 35899999999887777664 45699999999985 3 555444 3444444444422 11 1267789999999
Q ss_pred HHHHHHHHHHHHHHH-HhhhcccCccchHH-HHHHH----HHHHHHHHHHHHHHhhccC--ChhHHHHHHHHHHHHHHHH
Q 008185 222 NLGASITEVAKDALV-AEYGQKNGIVGLQS-YAFMA----AASGGILGNLFGGYFLLKT--PPTTMFLVFAVLLSLQLAI 293 (574)
Q Consensus 222 ~~g~~~~~~~~~a~i-~d~~~~~~rg~~~s-~~~~~----~~~G~~igp~igg~l~~~~--gwr~~f~i~ai~~~~~~~~ 293 (574)
+++.+.-...-.+.+ .|.-++.......+ .++.+ ..+-.+++.+++.++.+.. |...+|.....+.++..++
T Consensus 132 GiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~ 211 (354)
T PF05631_consen 132 GIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVL 211 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence 999888766555554 33322211111121 22212 2233444445555555544 4588888877666666665
Q ss_pred hh-hcccccccccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccc-eeehccccCCCch
Q 008185 294 SF-SAREESLGLAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSM-FCYQTQCLNINPS 371 (574)
Q Consensus 294 ~~-~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~g~s~~ 371 (574)
.. ..+|.+....+. .+..+..++.. ..+.+||+++...+...+-=..++.+.-.. |-...+. ...
T Consensus 212 I~~~W~ENyg~~~~~-------~~~~~~~~~a~---~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~---~~~ 278 (354)
T PF05631_consen 212 ILKTWPENYGDTSSS-------SSLSGSFREAW---RAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDD---EEL 278 (354)
T ss_pred HHhcccccCCCcccc-------cchHHHHHHHH---HHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCCC---CCC
Confidence 54 467766432211 11112222222 234568888776655444112222111000 1011111 123
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 008185 372 VIGMSRVIGQSMLLSLTVFYDRYWKKV 398 (574)
Q Consensus 372 ~~gl~~i~~~ig~lig~~l~~~l~~r~ 398 (574)
-.|+++...++.+++|..++.++..+.
T Consensus 279 P~GlIFssFM~a~MlGS~lf~~l~s~~ 305 (354)
T PF05631_consen 279 PLGLIFSSFMVAMMLGSSLFSRLLSKS 305 (354)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 478999999999999999997766543
No 157
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.82 E-value=3.3e-08 Score=106.48 Aligned_cols=156 Identities=17% Similarity=0.030 Sum_probs=103.3
Q ss_pred HHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhh---cccCcc----chH
Q 008185 140 HMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLA---LFPVAA----KAL 211 (574)
Q Consensus 140 ~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~---~~~~~~----~~~ 211 (574)
++.+++|.+..+.++......+...+ .++.|+++||+ +||+.+.++..+..++..++. ...... ...
T Consensus 309 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (481)
T TIGR00879 309 TIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-----GRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGN 383 (481)
T ss_pred HHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhH
Confidence 34455899888888777776665444 77889999985 345555555555555554444 111110 011
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHH
Q 008185 212 PNLMACVL-LSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQ 290 (574)
Q Consensus 212 ~~l~~~~~-l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~ 290 (574)
..+....+ ....+.+. ......++.|..|+++|+.++++.+....+|.+++|.+.+.+.+..+|++.|++.+++.++.
T Consensus 384 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 462 (481)
T TIGR00879 384 VAIVFILLFIAFFAMGW-GPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLG 462 (481)
T ss_pred HHHHHHHHHHHHHHccc-cCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHH
Confidence 11122222 22222222 12334566899998999999999999999999999999999998899999999998888777
Q ss_pred HHHh-hhccccc
Q 008185 291 LAIS-FSAREES 301 (574)
Q Consensus 291 ~~~~-~~lpEt~ 301 (574)
.++. ++.||++
T Consensus 463 ~i~~~~~~~~~~ 474 (481)
T TIGR00879 463 LIFVYFFLPETK 474 (481)
T ss_pred HHHHheecccCC
Confidence 7665 4677765
No 158
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.82 E-value=7.5e-08 Score=102.39 Aligned_cols=151 Identities=17% Similarity=0.060 Sum_probs=101.6
Q ss_pred hHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHH
Q 008185 137 LNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLM 215 (574)
Q Consensus 137 ~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 215 (574)
.+.++++ .|.++.+.++..+...++..+ .++.|+++||+ +||+.+.++.....++..++...+ + ...+.
T Consensus 243 ~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~ 312 (406)
T PRK11551 243 LPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-----RPRRVVLLIYAGILASLAALAAAP-S---FAGML 312 (406)
T ss_pred HHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHhcC-c---HHHHH
Confidence 3445555 799999999988888776655 67899999985 455555444444444444343332 2 22333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccC-ChhHHHHHHHHHHHHHHHHh
Q 008185 216 ACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKT-PPTTMFLVFAVLLSLQLAIS 294 (574)
Q Consensus 216 ~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~-gwr~~f~i~ai~~~~~~~~~ 294 (574)
+..++.+++.+.......+++.|..|+++|++.+++.+....+|..+||.++|++.+.. +|...+++.+...++..+..
T Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK11551 313 LAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAA 392 (406)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHH
Confidence 44444444444444555678899999999999999999999999999999999998764 46666766655554444444
Q ss_pred hhc
Q 008185 295 FSA 297 (574)
Q Consensus 295 ~~l 297 (574)
+++
T Consensus 393 ~~~ 395 (406)
T PRK11551 393 LLL 395 (406)
T ss_pred HHH
Confidence 443
No 159
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.82 E-value=4.3e-08 Score=103.02 Aligned_cols=127 Identities=13% Similarity=0.054 Sum_probs=92.8
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
..+.+|.++.+.|+......++..++.++.+++.||+++|+.+..+.++..+..+... .. ++.+. +...
T Consensus 31 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~-~~---------~~~~~-~~~~ 99 (385)
T TIGR00710 31 IAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLA-LS---------NNIET-LLVL 99 (385)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHH-HH---------ccHHH-HHHH
Confidence 3567999999999999999999999999999999999999998887766655443221 11 11111 1111
Q ss_pred HHHHHHH-HhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 442 GLAETLA-QFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 442 ~l~~~~~-~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
.+..+++ .....+...++.|.+|+++|++++|+.+....+|..+++.+++.+.+..++
T Consensus 100 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 158 (385)
T TIGR00710 100 RFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSW 158 (385)
T ss_pred HHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 1222222 233344467788999999999999999999999999999999998887664
No 160
>PRK12382 putative transporter; Provisional
Probab=98.81 E-value=9.9e-08 Score=101.07 Aligned_cols=145 Identities=13% Similarity=0.045 Sum_probs=102.4
Q ss_pred HHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHH
Q 008185 139 FHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMAC 217 (574)
Q Consensus 139 ~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 217 (574)
.++++ .+.+. .++..+.+.++..+ .++.|+++||+ +||+.+..+..+..+++.+....+ + ...++++
T Consensus 241 ~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-----g~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~ 308 (392)
T PRK12382 241 LYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-----GGVKVAIVSLLVETVGLLLLWLAP-T---AWVALAG 308 (392)
T ss_pred HHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCeehHHHHHHHHHHHHHHHHcc-c---HHHHHHH
Confidence 35544 45543 44445555555444 67899999985 344455556666566665554443 2 3334556
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHhh
Q 008185 218 VLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAISF 295 (574)
Q Consensus 218 ~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~~ 295 (574)
.++.+++.+...+...+.+.|..++++||.++++.+....+|..+||.++|++.+..||++.|++.+++.++..++.+
T Consensus 309 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 309 AALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 666667766665556677788888899999999999999999999999999999999999999999877766655543
No 161
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.78 E-value=4e-08 Score=101.59 Aligned_cols=128 Identities=22% Similarity=0.174 Sum_probs=96.0
Q ss_pred ehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeeh
Q 008185 361 YQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCF 440 (574)
Q Consensus 361 ~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~ 440 (574)
+..+.+|.++.+.|+......++..++.++.+++.||+++|+++..+.++.++..++.. +. ++.+ .+..
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~-~~---------~~~~-~~~~ 90 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA-FA---------SNFW-LLLI 90 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH-HH---------CCHH-HHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh-hh---------hhHH-HHhh
Confidence 45678999999999999999999999999999999999999988888777766633222 11 1222 2222
Q ss_pred hHHHHHHH-HhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 441 AGLAETLA-QFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 441 ~~l~~~~~-~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
..+..+++ +........++.|..|+++|++++|+.+...++|..+++.+++.+.+..++
T Consensus 91 ~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~ 150 (352)
T PF07690_consen 91 ARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGW 150 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHH
T ss_pred hccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccc
Confidence 22333333 333444467889999999999999999999999999999999998876664
No 162
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.78 E-value=1.3e-07 Score=99.84 Aligned_cols=155 Identities=10% Similarity=0.063 Sum_probs=105.8
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
..+.+|+++.+.|+......++..++.++.+.+.||+++|+.+..+.++.++..+... +. ++.+ .+...
T Consensus 38 l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~-~~---------~~~~-~l~~~ 106 (405)
T TIGR00891 38 VAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACG-FA---------PGYI-TMFIA 106 (405)
T ss_pred HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH-Hh---------ccHH-HHHHH
Confidence 4567999999999999999999999999999999999999998887766655443221 11 1111 11111
Q ss_pred HHHHHHHH-hhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHH
Q 008185 442 GLAETLAQ-FKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALL 520 (574)
Q Consensus 442 ~l~~~~~~-~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll 520 (574)
.+..+++. ........++.|.+|+++|+.++|+.+....+|..+++.+++.+.+..+. .....+.+.++..++
T Consensus 107 ~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~------~w~~~f~~~~~~~~~ 180 (405)
T TIGR00891 107 RLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD------GWRALFFISILPIIF 180 (405)
T ss_pred HHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc------cHHHHHHHHHHHHHH
Confidence 22222332 22333456788999999999999999999999999999999988876541 112233344444444
Q ss_pred HHHHHHhcCCCHH
Q 008185 521 PLIWIHNVPMSET 533 (574)
Q Consensus 521 ~l~~~~~vp~~~~ 533 (574)
.++....+||+++
T Consensus 181 ~~~~~~~~~~~~~ 193 (405)
T TIGR00891 181 ALWLRKNIPEAED 193 (405)
T ss_pred HHHHHHhCCCChh
Confidence 5555567788754
No 163
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.76 E-value=1.5e-07 Score=103.06 Aligned_cols=155 Identities=19% Similarity=0.150 Sum_probs=103.2
Q ss_pred HHHHHHhcCCChhHHHHHHH-Hhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHH---HHhhcccCccchHH
Q 008185 138 NFHMAHNLSLHPSTLQLVQN-SGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSW---GPLALFPVAAKALP 212 (574)
Q Consensus 138 ~~~l~~~~~~s~~~~~l~~s-~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~---~~~~~~~~~~~~~~ 212 (574)
++++.+++|.+.++.++... ...++..+ .++.|+++||+ +||+.+.++.++..+.. ..++...++ ..
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-----g~~~~l~i~~~l~~l~~l~~~~l~~~~~~---~~ 317 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-----SLFRALMIFGILQGVSNAGYWLLSITDKN---LY 317 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHHhcccc---HH
Confidence 34566678999999999874 44555555 67889999996 33344443433333322 222222221 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHH
Q 008185 213 NLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLA 292 (574)
Q Consensus 213 ~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~ 292 (574)
.+.+..++..++.+.......++..+..+++.++..+++.+...++|.++++.++|++.+..||+..|.+.+++.++..+
T Consensus 318 ~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~ 397 (491)
T PRK11010 318 SMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLL 397 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 23333444343334333444577788888888899999999988999998989999999999999999998888877666
Q ss_pred Hhhhcccc
Q 008185 293 ISFSAREE 300 (574)
Q Consensus 293 ~~~~lpEt 300 (574)
...+++++
T Consensus 398 ~~~~~~~~ 405 (491)
T PRK11010 398 LLLVCRQT 405 (491)
T ss_pred HHHHHHhc
Confidence 65555554
No 164
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.76 E-value=3.2e-07 Score=95.60 Aligned_cols=170 Identities=18% Similarity=0.082 Sum_probs=116.3
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHH
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIG 190 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~ 190 (574)
++.++. ....+++..... ..+..+.+++++..|++...+++++-++-++..+ ..+.|.++|| +.+..+...
T Consensus 210 ~p~v~~-~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr------~~~~~l~~~ 282 (394)
T COG2814 210 RPGVLL-GLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR------GPRRALIAA 282 (394)
T ss_pred CchHHH-HHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc------cchhHHHHH
Confidence 444444 333333322222 4455566788999999999999999999888777 6688999997 233344445
Q ss_pred HHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--ccCccchHHHHHHHHHHHHHHHHHHHH
Q 008185 191 VFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQ--KNGIVGLQSYAFMAAASGGILGNLFGG 268 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~--~~~rg~~~s~~~~~~~~G~~igp~igg 268 (574)
..+.+++...+.+.+++ ....++..++-++...... ..+..+..+ ++.++.++++.....++|..+|..+||
T Consensus 283 ~~l~a~~~l~l~~~~~~---~~~~~~~~~~wg~a~~~~~---~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG 356 (394)
T COG2814 283 LLLLALALLALTFTGAS---PALALALLFLWGFAFSPAL---QGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGG 356 (394)
T ss_pred HHHHHHHHHHHHHhcch---HHHHHHHHHHHHHHhhhhh---hHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666666666554 2223333444333333322 334444443 477888899999999999999999999
Q ss_pred HhhccCChhHHHHHHHHHHHHHHHHhh
Q 008185 269 YFLLKTPPTTMFLVFAVLLSLQLAISF 295 (574)
Q Consensus 269 ~l~~~~gwr~~f~i~ai~~~~~~~~~~ 295 (574)
.+.++.|+..+.|+.+++.++..++.+
T Consensus 357 ~v~~~~g~~~~~~~~a~l~~~a~~~~~ 383 (394)
T COG2814 357 LVLDALGYAATGWVGAALLLLALLLAL 383 (394)
T ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988887776654
No 165
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.76 E-value=1.9e-07 Score=106.04 Aligned_cols=160 Identities=14% Similarity=0.104 Sum_probs=109.5
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhH
Q 008185 363 TQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAG 442 (574)
Q Consensus 363 ~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~ 442 (574)
...+|+++.+.+++.....+|.+++.++.+++.+|+|+|+.++++.++.+++.++.. +.. +.+..++. -
T Consensus 194 ~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~a-fa~---------s~~~llv~-R 262 (742)
T TIGR01299 194 EKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSS-FVQ---------GYGFFLFC-R 262 (742)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH-HHh---------hHHHHHHH-H
Confidence 356889999999998889999999999999999999999998887766655443321 111 11111111 2
Q ss_pred HHHHHH-HhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccC-----CCCChhHHHHHHHH
Q 008185 443 LAETLA-QFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFG-----DYSSLPVGIVIQFL 516 (574)
Q Consensus 443 l~~~~~-~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~-----~~~~l~~~~li~~~ 516 (574)
+..+++ +.......+++.|.+|++.||..+++......+|..+++.++..+...+|+... ...+...+++++++
T Consensus 263 ~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~l 342 (742)
T TIGR01299 263 LLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAF 342 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHH
Confidence 222223 222333467889999999999999999999999999999988888776664311 11123344555555
Q ss_pred HHHHHHHHHHhcCCCHH
Q 008185 517 AALLPLIWIHNVPMSET 533 (574)
Q Consensus 517 ~~ll~l~~~~~vp~~~~ 533 (574)
..++.+++.+++||...
T Consensus 343 p~ll~ll~~~~lPESPr 359 (742)
T TIGR01299 343 PCVFAIGALTFMPESPR 359 (742)
T ss_pred HHHHHHHHHHHcCCCHH
Confidence 55555666778998854
No 166
>PRK10504 putative transporter; Provisional
Probab=98.75 E-value=2.3e-07 Score=100.89 Aligned_cols=136 Identities=13% Similarity=-0.021 Sum_probs=95.5
Q ss_pred hhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHH
Q 008185 135 LALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPN 213 (574)
Q Consensus 135 ~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 213 (574)
...+++++..+|.++.+.++......++... .++.|+++||+ +||+.+..+.++..+...++....... ....
T Consensus 282 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 355 (471)
T PRK10504 282 FMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-----GYRRVLVATTLGLALVSLLFMLVALLG-WYYL 355 (471)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CchHHHHHHHHHHHHHHHHHHhccccc-cHHH
Confidence 3345577767899999999888776665544 68899999985 455556556665555555444433221 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCCh
Q 008185 214 LMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPP 276 (574)
Q Consensus 214 l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gw 276 (574)
+.+..++.+++.+........++.+..++++++.++++.+....+|..+|+.++|.+.+..|+
T Consensus 356 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 356 LPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 333444555666666666677788888889999999999999999999999999988776554
No 167
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.74 E-value=1.4e-07 Score=98.49 Aligned_cols=132 Identities=13% Similarity=0.012 Sum_probs=94.7
Q ss_pred ccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcce
Q 008185 356 GSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEV 435 (574)
Q Consensus 356 ~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~ 435 (574)
...+.+.++.+|+++.+.|+......++.+++.++.+++.||+++|+.+..+.++.++..+... +... +.+
T Consensus 22 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~-~~~~--------~~~ 92 (366)
T TIGR00886 22 PLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAG-LAVQ--------SYS 92 (366)
T ss_pred HhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH-HHhh--------hHH
Confidence 3344456778999999999999999999999999999999999999998888776665543321 1110 111
Q ss_pred EEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Q 008185 436 FVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLT 497 (574)
Q Consensus 436 ~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~ 497 (574)
..+. ..+..+++.....+...++++.+|+++|+++.++.....++|..+++.+++.+...+
T Consensus 93 ~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 153 (366)
T TIGR00886 93 VLLL-LRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSL 153 (366)
T ss_pred HHHH-HHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 1111 122222333334455677889999999999999999999999999998888777643
No 168
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.73 E-value=3.8e-07 Score=96.54 Aligned_cols=163 Identities=11% Similarity=0.048 Sum_probs=104.3
Q ss_pred HHHHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHH
Q 008185 326 SDLIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVG 405 (574)
Q Consensus 326 ~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~ 405 (574)
....+++.++.+...+....+ .+....+...+.|+-.++++-.+...|.+.+....|.++.-++..++.++.|.-+++.
T Consensus 362 a~~~~~~~s~~~llff~~av~-mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~ 440 (618)
T KOG3762|consen 362 ADVGKVFASPHILLFFFVAVV-MGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMY 440 (618)
T ss_pred HHHHHHhcCCCEEehhHHHHH-HHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceee
Confidence 344455666655443222222 1112222223345556677777777888888888889888888899999999888877
Q ss_pred HHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHH-HhHHH
Q 008185 406 AVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASAL-CLSSI 484 (574)
Q Consensus 406 ~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~-~lg~~ 484 (574)
++..+.+.=.+ ... .+.+.|.++-.-.+-...-...+.....+++..+|++.++++.|++.... .+|..
T Consensus 441 lgLa~~~~Rf~----~~S------~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g 510 (618)
T KOG3762|consen 441 LGLACNVGRFL----YYS------YLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKG 510 (618)
T ss_pred ehhhHHHHHHH----HHH------HhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcc
Confidence 66444433221 111 12344555443333322223334444567888999999999999998876 68999
Q ss_pred HHHHHHHHHHHhhCc
Q 008185 485 ASGFLGVGLASLTGI 499 (574)
Q Consensus 485 lg~~i~g~l~~~~g~ 499 (574)
+|+++||.+.+.+|.
T Consensus 511 ~GslIGG~~v~~fg~ 525 (618)
T KOG3762|consen 511 LGSLIGGFVVERFGA 525 (618)
T ss_pred hhhhhhhhhheeehh
Confidence 999999999998774
No 169
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.69 E-value=2.5e-07 Score=98.99 Aligned_cols=140 Identities=13% Similarity=0.093 Sum_probs=88.8
Q ss_pred hhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHH
Q 008185 136 ALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNL 214 (574)
Q Consensus 136 ~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l 214 (574)
..+.++++ .|.++.+.+...++..++..+ .+++|+++||+ +||+.+..+.++..+............ ...+
T Consensus 253 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 324 (426)
T PRK12307 253 LLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-----GLKKTFSIGLLMSFLFIFPLFRIPQDN--YLLL 324 (426)
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHHcccc--HHHH
Confidence 34556665 689999888888777766554 78899999985 345555555555444443333322211 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHH
Q 008185 215 MACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVF 283 (574)
Q Consensus 215 ~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ 283 (574)
.++.+...++...........+.|..|++.||.++|+.+....+|..+||.++|++.+..|+....++.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~ 393 (426)
T PRK12307 325 GACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFI 393 (426)
T ss_pred HHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 111111111111112223466789999999999999998888999999999999999988877654444
No 170
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.69 E-value=1.2e-07 Score=100.97 Aligned_cols=128 Identities=12% Similarity=0.097 Sum_probs=92.2
Q ss_pred eehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEee
Q 008185 360 CYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLC 439 (574)
Q Consensus 360 ~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~ 439 (574)
.++.+++|+++.+.|+......++..+...+.+++.||+++|+++..+.++.++..+.. ... ++.+..+.
T Consensus 35 ~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~-~~~---------~~~~~l~~ 104 (400)
T PRK11646 35 IRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATM-AIA---------HEPWLLWL 104 (400)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHH-HHh---------ccHHHHHH
Confidence 35667899999999999888888887778888999999999999888777666544332 111 11111111
Q ss_pred hhHHHHHHHH-hhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 440 FAGLAETLAQ-FKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 440 ~~~l~~~~~~-~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
..+..+++. ....+..+++.+.+|++.+++++|+.+...++|..+||.+++.+. ..|+
T Consensus 105 -~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~ 163 (400)
T PRK11646 105 -SCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDF 163 (400)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhH
Confidence 122222332 223334677889999999999999999999999999999999987 4443
No 171
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.69 E-value=3.1e-07 Score=97.66 Aligned_cols=128 Identities=21% Similarity=0.139 Sum_probs=93.7
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
..+.+|+++.+.|+......++..++.++.+++.||+++|+++..+.++.++..+... +. ++.+..+. .
T Consensus 46 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~-~~---------~~~~~l~~-~ 114 (394)
T PRK10213 46 MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVS-FA---------NSFSLLLI-G 114 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHH-HH---------ChHHHHHH-H
Confidence 3467999999999998888889999999999999999999999888777765443321 11 11111111 1
Q ss_pred HHHHHHH-HhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcc
Q 008185 442 GLAETLA-QFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGIT 500 (574)
Q Consensus 442 ~l~~~~~-~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~ 500 (574)
-+..+++ +........++.|.+|+++++.+.++.....++|..++|.+++.+.+.+|++
T Consensus 115 r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~ 174 (394)
T PRK10213 115 RACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWR 174 (394)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHH
Confidence 1222222 2222333567889999999999999999999999999999999999877753
No 172
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.69 E-value=1.4e-07 Score=98.03 Aligned_cols=129 Identities=16% Similarity=0.122 Sum_probs=92.5
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHH
Q 008185 365 CLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLA 444 (574)
Q Consensus 365 ~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~ 444 (574)
..+.++.+.|+......++.+++.++.+++.||+++|+.+..+.++..+..+..... ... ...+.+..+.. .+.
T Consensus 28 ~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~-~~l 101 (365)
T TIGR00900 28 AGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV-ALL----GGLNIWQVYVL-AGI 101 (365)
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH-HHc----CCCcHHHHHHH-HHH
Confidence 478889999999999999999999999999999999999888776655544332211 100 00111111111 222
Q ss_pred HHHH-HhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 445 ETLA-QFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 445 ~~~~-~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
.+++ .....+..+++.|.+|+++|++++|+.+....+|..+|+.+++.+.+..|+
T Consensus 102 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~ 157 (365)
T TIGR00900 102 LAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGI 157 (365)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 2233 233334467889999999999999999999999999999999999887764
No 173
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.68 E-value=5.4e-07 Score=95.67 Aligned_cols=149 Identities=9% Similarity=-0.019 Sum_probs=98.7
Q ss_pred hHHHHHHhc---CCChhHHHHHHHHhhhhhh-hhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHH
Q 008185 137 LNFHMAHNL---SLHPSTLQLVQNSGNLPMV-AKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALP 212 (574)
Q Consensus 137 ~~~~l~~~~---~~s~~~~~l~~s~~~l~~~-~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~ 212 (574)
.+.++++.+ +.+....+...++..+... ..+..|++.||+ +||+.+.++..+..+.+.+..... + .+
T Consensus 238 ~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-----g~~~~l~~~~~l~~l~~~~~~~~~-~---~~ 308 (396)
T TIGR00882 238 FANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-----GAKNALLIAGTIMSVRIIGSSFAT-T---AL 308 (396)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccchhHHHHHHHHHHHHHHHHhcC-C---hH
Confidence 344666654 4556677777777666543 366789999985 455566666666666665544433 2 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHH-HHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHH
Q 008185 213 NLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSY-AFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQL 291 (574)
Q Consensus 213 ~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~-~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~ 291 (574)
.+++..++.+++.............+..+++.++...+. .+....+|.++||+++|++.+..||+.+|.+.+++.++..
T Consensus 309 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~ 388 (396)
T TIGR00882 309 EVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFT 388 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 445566666666544333333344555555666665555 5677789999999999999999999999999988887766
Q ss_pred HHh
Q 008185 292 AIS 294 (574)
Q Consensus 292 ~~~ 294 (574)
++.
T Consensus 389 ~~~ 391 (396)
T TIGR00882 389 LIS 391 (396)
T ss_pred HHH
Confidence 653
No 174
>TIGR00895 2A0115 benzoate transport.
Probab=98.67 E-value=1.1e-07 Score=99.95 Aligned_cols=127 Identities=15% Similarity=0.186 Sum_probs=92.1
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
..+.+|+++.+.|+......++.+++.++.+++.||+++|+.+..+.++..+..++.. .. ++.+. +...
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~-~~~~ 111 (398)
T TIGR00895 43 ISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCA-LA---------TNVTQ-LLIL 111 (398)
T ss_pred HhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHH-Hc---------cchHH-HHHH
Confidence 3456899999999999888899999999999999999999988877666555433211 11 11111 1111
Q ss_pred HHHHHHH-HhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 442 GLAETLA-QFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 442 ~l~~~~~-~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
.+..+++ +....+...++.|..|++.|++++|+.+....+|..+++.+++.+.+..|+
T Consensus 112 ~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~ 170 (398)
T TIGR00895 112 RFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW 170 (398)
T ss_pred HHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc
Confidence 1222222 233344467789999999999999999999999999999999998887664
No 175
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.67 E-value=4.6e-07 Score=96.91 Aligned_cols=124 Identities=10% Similarity=0.107 Sum_probs=91.3
Q ss_pred ehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeeh
Q 008185 361 YQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCF 440 (574)
Q Consensus 361 ~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~ 440 (574)
..++++|++..+.|+......++..++.+..+++.||+++|+++..+.++..+..+... +.. +.+ .+..
T Consensus 33 ~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~-~~~---------~~~-~l~~ 101 (412)
T TIGR02332 33 TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATM-FAT---------GPE-SLYL 101 (412)
T ss_pred hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHH-Hhc---------CHH-HHHH
Confidence 45678999999999999999999999999999999999999998887776665544321 111 111 1111
Q ss_pred hHHHHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 008185 441 AGLAETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLAS 495 (574)
Q Consensus 441 ~~l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~ 495 (574)
.-+..+++.....|. ..++.|.+|+++||++.|+++....+|..+++.+++.+.+
T Consensus 102 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 157 (412)
T TIGR02332 102 LRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILA 157 (412)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222333333333444 4568999999999999999999999999999999988765
No 176
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.63 E-value=3.3e-07 Score=96.25 Aligned_cols=126 Identities=10% Similarity=0.071 Sum_probs=92.0
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHH
Q 008185 364 QCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGL 443 (574)
Q Consensus 364 ~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l 443 (574)
+.+|+++.+.++......++..++..+.+++.||+++|+.+..+.++.++..+... .. ++.+..+....+
T Consensus 19 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~-~~---------~~~~~~~~~~~l 88 (377)
T PRK11102 19 ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACA-LA---------QTIDQLIYMRFL 88 (377)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHH-HH---------ccHHHHHHHHHH
Confidence 56899999999999999999999999999999999999988877766655544321 11 111111111122
Q ss_pred HHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 444 AETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 444 ~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
..........+...++.+..|+++|++++++.+....+|..+++.+++.+.+..++
T Consensus 89 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 144 (377)
T PRK11102 89 HGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSW 144 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCh
Confidence 22222233344567788999999999999999999999999999999999887664
No 177
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.63 E-value=4.2e-07 Score=96.06 Aligned_cols=127 Identities=9% Similarity=-0.004 Sum_probs=91.1
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
..+++|++..+.|+......++.+++.++.+++.||+++|+.+..+.++.++..+.. ... ++.+..+..
T Consensus 29 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~-~~~---------~~~~~l~~~- 97 (382)
T PRK10091 29 LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMF-TLS---------SSYLMLAIG- 97 (382)
T ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH-HHh---------CcHHHHHHH-
Confidence 456799999999999999999999999999999999999999888877766544322 111 111111111
Q ss_pred HHHHHHHH-hhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 442 GLAETLAQ-FKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 442 ~l~~~~~~-~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
.+..+++. .......+++.+.+|+++++.++++......+|..+++.+++.+.+..|+
T Consensus 98 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 156 (382)
T PRK10091 98 RLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSW 156 (382)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccH
Confidence 12222222 22222345678899999999999999998999999999999988876654
No 178
>PRK15075 citrate-proton symporter; Provisional
Probab=98.62 E-value=8.5e-07 Score=95.51 Aligned_cols=136 Identities=19% Similarity=0.101 Sum_probs=82.3
Q ss_pred hHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHH-HHhhcccCccchHHHH
Q 008185 137 LNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSW-GPLALFPVAAKALPNL 214 (574)
Q Consensus 137 ~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~-~~~~~~~~~~~~~~~l 214 (574)
.+.++++.+|.+..+.++...++.++..+ .+++|+++||+ | ||| .+..+....++.. .......... ....+
T Consensus 261 ~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~---g-~r~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 334 (434)
T PRK15075 261 TPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI---G-RRP-VLIAFTVLAILTAYPALSWLVAAP-SFARM 334 (434)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c-chH-HHHHHHHHHHHHHHHHHHHHHcCC-chHHH
Confidence 45577777899999888877776665544 77899999996 2 444 4443333322211 1111111111 12222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHH-HHHHHHHHHHHHHHHhhccCChhH
Q 008185 215 MACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFM-AAASGGILGNLFGGYFLLKTPPTT 278 (574)
Q Consensus 215 ~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~-~~~~G~~igp~igg~l~~~~gwr~ 278 (574)
.+..++.+++.+........++.|..|+++|+..+++.+. +..++..++|.+.|++.+..|+++
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~ 399 (434)
T PRK15075 335 LAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKA 399 (434)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCch
Confidence 2323333334444333344678899999999999987544 444567789999999999888654
No 179
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.62 E-value=1.1e-06 Score=94.60 Aligned_cols=156 Identities=14% Similarity=0.060 Sum_probs=86.7
Q ss_pred hHHHHHHhcCCChhHHHHHHHHhhhhh-hhhhhheeeccccccCCCccchhHhHHHHHHHHHHH-HhhcccCccchHHHH
Q 008185 137 LNFHMAHNLSLHPSTLQLVQNSGNLPM-VAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWG-PLALFPVAAKALPNL 214 (574)
Q Consensus 137 ~~~~l~~~~~~s~~~~~l~~s~~~l~~-~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~-~~~~~~~~~~~~~~l 214 (574)
.+.++.+++|.+..+.++..++..+.. ..+++.|+++||+ +||+.+.++..+..+... ......... .....
T Consensus 266 lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-----grr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 339 (432)
T PRK10406 266 MQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-----GRRTSMLCFGSLAALFTVPILSALQNVS-SPYAA 339 (432)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CchHHHHHHHHHHHHHHHHHHHHHHcCC-cHHHH
Confidence 445777778999988888777765544 4488899999985 344444433333222221 111111111 11111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHH-HHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHHHHH
Q 008185 215 MACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAA-SGGILGNLFGGYFLLKTP-PTTMFLVFAVLLSLQLA 292 (574)
Q Consensus 215 ~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~-~G~~igp~igg~l~~~~g-wr~~f~i~ai~~~~~~~ 292 (574)
+.+.++..++.+........++.|..|++.|+.++|+.+.... ++....|.+.+.+ +..| |...++..++..++..+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~ 418 (432)
T PRK10406 340 FGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFL 418 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHH
Confidence 1222222222222223345678999999999999998776544 3333488888865 4445 55556655555555444
Q ss_pred Hhhhccc
Q 008185 293 ISFSARE 299 (574)
Q Consensus 293 ~~~~lpE 299 (574)
..+++++
T Consensus 419 ~~~~l~~ 425 (432)
T PRK10406 419 VSLMLHR 425 (432)
T ss_pred HHHHhhh
Confidence 4455444
No 180
>PRK11043 putative transporter; Provisional
Probab=98.61 E-value=3.8e-07 Score=96.92 Aligned_cols=127 Identities=13% Similarity=0.060 Sum_probs=89.7
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
..+.+|.++.+.|+......++..++..+.+++.||+++|+.+..+.++..+..+.. ... ++.+. +...
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~---------~~~~~-l~~~ 100 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGM-LWV---------ESAAQ-LLVL 100 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHH-HHh---------cCHHH-HHHH
Confidence 346789999999999999999999999999999999999999887766655443321 111 11111 1111
Q ss_pred HHHHHHH-HhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 442 GLAETLA-QFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 442 ~l~~~~~-~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
.+..+++ .........+..|..|++.++..++..+....++..++|.+++.+.+..|+
T Consensus 101 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~ 159 (401)
T PRK11043 101 RFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGW 159 (401)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Confidence 1122222 122222346678889999999999999988999999999999999887664
No 181
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.60 E-value=5.2e-07 Score=95.58 Aligned_cols=126 Identities=10% Similarity=0.052 Sum_probs=89.6
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhH
Q 008185 363 TQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAG 442 (574)
Q Consensus 363 ~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~ 442 (574)
.+.+|.++.+.++......++..++.++.+++.||+++|+.+..+.++..+..+... .. ++.+..+.. .
T Consensus 30 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~-~~---------~~~~~~~~~-~ 98 (392)
T PRK10473 30 AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCS-LA---------ETSSLFLAG-R 98 (392)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHH-Hh---------CcHHHHHHH-H
Confidence 456899999999998888899999999999999999999998887766655443221 11 111111111 1
Q ss_pred HHHHHH-HhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 443 LAETLA-QFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 443 l~~~~~-~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
+..+++ .....+...++.|..|+++|+++.++.+...+++..++|.+++.+.+..|+
T Consensus 99 ~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~ 156 (392)
T PRK10473 99 FLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPW 156 (392)
T ss_pred HHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCh
Confidence 112222 222333456788999999999999999999999999999998887765553
No 182
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.58 E-value=9.9e-07 Score=93.76 Aligned_cols=147 Identities=14% Similarity=0.061 Sum_probs=101.9
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhH
Q 008185 363 TQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAG 442 (574)
Q Consensus 363 ~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~ 442 (574)
...++.++.+.++......++..+..++.+++.||+++|+++.++.++.++..+... +.. + . +. .-
T Consensus 30 ~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~-~~~--~-------~---~~-~r 95 (393)
T PRK11195 30 LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML-FGI--H-------P---LL-AY 95 (393)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH-HHH--H-------H---HH-HH
Confidence 345777888889988888889999999999999999999999988877665443221 111 1 0 11 11
Q ss_pred HHHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHH
Q 008185 443 LAETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLP 521 (574)
Q Consensus 443 l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~ 521 (574)
+..+++.....|. .+++.|++|+++++++.|+.+...++|..+||.++|.+.+.. ....+.+.++..++.
T Consensus 96 ~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~---------~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 96 GLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH---------AEAALAVCALIYLLA 166 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHH
Confidence 2233444344454 678999999999999999999999999999999999998853 122223333333334
Q ss_pred HHHHHhcCCCH
Q 008185 522 LIWIHNVPMSE 532 (574)
Q Consensus 522 l~~~~~vp~~~ 532 (574)
++....+||.+
T Consensus 167 ~~~~~~l~~~~ 177 (393)
T PRK11195 167 ALFNLFIPRLG 177 (393)
T ss_pred HHHHhcCCCCc
Confidence 44456677643
No 183
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.57 E-value=2.3e-06 Score=90.46 Aligned_cols=141 Identities=15% Similarity=0.183 Sum_probs=96.5
Q ss_pred HHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHH
Q 008185 138 NFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMA 216 (574)
Q Consensus 138 ~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 216 (574)
+.+++ +.|.+..+.+...++..+.... .++.|++.||+ ++|..+..+.+...+.+.+++..+ + .+.+++
T Consensus 229 ~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-----~~~~~l~~~~~~~~~~~~~~~~~~-~---~~~~~~ 298 (382)
T PRK11128 229 AIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-----SARDLLLLSAICGVVRWGLMGSTT-A---LPWLIV 298 (382)
T ss_pred HHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHhhh-h---HHHHHH
Confidence 44555 4899999999988877665444 67789999984 455566667666666666555443 2 444556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHH-HHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHH
Q 008185 217 CVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAF-MAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQ 290 (574)
Q Consensus 217 ~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~-~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~ 290 (574)
..++.+++.+...+....++.+. +++++++.++..+ ....+|..+||.++|.+.+..|+ ..|+..+++.++.
T Consensus 299 ~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 299 IQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 66776776666555555555554 4455677888775 44567889999999999999888 5677666665443
No 184
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.57 E-value=5e-07 Score=94.03 Aligned_cols=131 Identities=18% Similarity=0.185 Sum_probs=88.5
Q ss_pred HHHHHHhcCCChhHHHHHHHHh-hhhhhhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccc-------
Q 008185 138 NFHMAHNLSLHPSTLQLVQNSG-NLPMVAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAK------- 209 (574)
Q Consensus 138 ~~~l~~~~~~s~~~~~l~~s~~-~l~~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~------- 209 (574)
+++++. +|++....+.+.... ..|..++|+.|..|||-..+.+||||++..+.+...++..+..++++-..
T Consensus 56 tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~ 134 (498)
T KOG0637|consen 56 TPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNER 134 (498)
T ss_pred cHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcc
Confidence 346555 899888777665544 45778899999999998888779999999988888888777766554210
Q ss_pred h------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccc-hHHHHHHHHHHHHHHHHHHHHH
Q 008185 210 A------LPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVG-LQSYAFMAAASGGILGNLFGGY 269 (574)
Q Consensus 210 ~------~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~-~~s~~~~~~~~G~~igp~igg~ 269 (574)
. ....++...+.-+..-....+..++.+|...++++.+ +.+++....++|.++|..+|++
T Consensus 135 ~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 135 KPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred cccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccc
Confidence 0 0001111112223333344455788999986533333 7888888889999999888874
No 185
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.57 E-value=5.9e-07 Score=97.72 Aligned_cols=155 Identities=11% Similarity=-0.044 Sum_probs=96.5
Q ss_pred HHhcCCChhHHHHHHHHhhhhh-hhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhccc-CccchHHHHHHHHH
Q 008185 142 AHNLSLHPSTLQLVQNSGNLPM-VAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFP-VAAKALPNLMACVL 219 (574)
Q Consensus 142 ~~~~~~s~~~~~l~~s~~~l~~-~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~ 219 (574)
.+++|.+....++......+.. ...++.|+++||+ +||+.++.+.++.+++..+++... .+.... ....+.+
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-----g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~-~~~~~~~ 371 (479)
T PRK10077 298 FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-----GRKPLQIIGALGMAIGMFSLGTAFYTQAPGI-VALLSML 371 (479)
T ss_pred HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-----cChHHHHHhHHHHHHHHHHHHHHHhcCcccH-HHHHHHH
Confidence 3457887766665554444433 3367889999985 466666667766666655544332 111111 1122222
Q ss_pred HHHHHHHHH-HHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHH------HhhccCChhHHHHHHHHHHHHHHH
Q 008185 220 LSNLGASIT-EVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGG------YFLLKTPPTTMFLVFAVLLSLQLA 292 (574)
Q Consensus 220 l~~~g~~~~-~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg------~l~~~~gwr~~f~i~ai~~~~~~~ 292 (574)
+.+.+.+.. .+....++.|..|+++|+.++++......+|.++++.+.+ ++.+..+|++.|++.+++.++..+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (479)
T PRK10077 372 FYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAAL 451 (479)
T ss_pred HHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHH
Confidence 222222221 1234677899999899999999888877777777755544 444678999999998887777666
Q ss_pred Hh-hhcccccc
Q 008185 293 IS-FSAREESL 302 (574)
Q Consensus 293 ~~-~~lpEt~~ 302 (574)
+. ++.||++.
T Consensus 452 ~~~~~~~e~~~ 462 (479)
T PRK10077 452 FMWKFVPETKG 462 (479)
T ss_pred HHHhccccCCC
Confidence 65 46788764
No 186
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.55 E-value=1.5e-06 Score=92.14 Aligned_cols=150 Identities=14% Similarity=0.032 Sum_probs=95.3
Q ss_pred hHHHHHHhcCCChhHHHHHHHHhhh-hhhh-hhhheeeccccccCCCccchhHhHHHHHHHHH-HHHhhcccC-ccchHH
Q 008185 137 LNFHMAHNLSLHPSTLQLVQNSGNL-PMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILS-WGPLALFPV-AAKALP 212 (574)
Q Consensus 137 ~~~~l~~~~~~s~~~~~l~~s~~~l-~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~-~~~~~~~~~-~~~~~~ 212 (574)
.+.+++| .|.++++++++...... ...+ ..+.|++.||+ ++|+.+.++.....+. ......... ......
T Consensus 231 ~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-----g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (390)
T TIGR02718 231 SKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-----GLWRTFILGVGLAGSLALLWFAQAAFWLAPGIA 304 (390)
T ss_pred hhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHH
Confidence 3446666 79999999998877653 4445 45789999985 4555555444433121 111111100 000112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHH
Q 008185 213 NLMACVLLSNLGASITEVAKDALVAEYGQK-NGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQL 291 (574)
Q Consensus 213 ~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~-~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~ 291 (574)
.+.....+++++.+.......+.+.+..++ ++++..+++.+....+|..+||.++|++.+..|++..|++.+++.++..
T Consensus 305 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 305 VAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 222333344444444444445555566655 7889999999999999999999999999999999999998876665544
Q ss_pred H
Q 008185 292 A 292 (574)
Q Consensus 292 ~ 292 (574)
+
T Consensus 385 ~ 385 (390)
T TIGR02718 385 L 385 (390)
T ss_pred H
Confidence 3
No 187
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.54 E-value=2.3e-06 Score=93.83 Aligned_cols=151 Identities=19% Similarity=0.094 Sum_probs=116.1
Q ss_pred hhhHHHHHHhcCCChhHHHHHHHHhhhhhhhhh-hheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHH
Q 008185 135 LALNFHMAHNLSLHPSTLQLVQNSGNLPMVAKP-LYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPN 213 (574)
Q Consensus 135 ~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~p-l~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 213 (574)
.-+|.+.++++|.++...|++.+.+.++.+++- +.+.+.++. ++...+..+.+..+++...+++.++ .+.
T Consensus 239 aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-----~~~~lv~~~~~~~a~~~~~lal~~~----~~~ 309 (524)
T PF05977_consen 239 ALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-----SSRRLVLLASLLFALALLLLALSPS----FWL 309 (524)
T ss_pred HhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----CcchhhHHHHHHHHHHHHHHhcchH----HHH
Confidence 335667788899999999999999988887754 467777763 3444555677777777777766643 344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHH
Q 008185 214 LMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAI 293 (574)
Q Consensus 214 l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~ 293 (574)
.++..++.|++...........+-...|++.||+.++++.+....+..+|..+.|++.+..|.+..+.+.++..++..++
T Consensus 310 ~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 310 ALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 45566677777777777777778888899999999999999999999999999999999999999998877665555554
Q ss_pred h
Q 008185 294 S 294 (574)
Q Consensus 294 ~ 294 (574)
.
T Consensus 390 ~ 390 (524)
T PF05977_consen 390 A 390 (524)
T ss_pred H
Confidence 3
No 188
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.54 E-value=1.2e-06 Score=92.17 Aligned_cols=151 Identities=17% Similarity=0.069 Sum_probs=97.9
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhH
Q 008185 363 TQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAG 442 (574)
Q Consensus 363 ~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~ 442 (574)
.+++|+++.+.|+......++..++....+++.||+++|+++..+.+ ..+...... .. . ++ +..+...-
T Consensus 18 ~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~-~~~~~~~~~-~~-~-------~~-~~~l~~~R 86 (368)
T TIGR00903 18 AEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLA-TFAAAAGRL-LD-P-------FN-YEWLLACQ 86 (368)
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHH-HHHHHHHHH-HH-h-------cc-HHHHHHHH
Confidence 45689999999999888888888888889999999998876554433 222221111 10 0 11 11111112
Q ss_pred HHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHH-HHHHHHHH
Q 008185 443 LAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVI-QFLAALLP 521 (574)
Q Consensus 443 l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li-~~~~~ll~ 521 (574)
+..++++....+....++|..|+++|+++.++.+....+|..+++.+++.+.+..||+ ..+.+ ..+..+..
T Consensus 87 ~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr--------~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 87 LLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQ--------LLIIPIAAVAAAGI 158 (368)
T ss_pred HHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchH--------HHHHHHHHHHHHHH
Confidence 2223333233444556689999999999999999999999999999999998877653 22333 33323334
Q ss_pred HHHHHhcCCCH
Q 008185 522 LIWIHNVPMSE 532 (574)
Q Consensus 522 l~~~~~vp~~~ 532 (574)
+++.+++||.+
T Consensus 159 ~~~~~~lp~~p 169 (368)
T TIGR00903 159 ILVLAALPALP 169 (368)
T ss_pred HHHHHHcCCCC
Confidence 44556788753
No 189
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.53 E-value=9.4e-07 Score=94.87 Aligned_cols=128 Identities=16% Similarity=0.141 Sum_probs=87.0
Q ss_pred HHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHH
Q 008185 140 HMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACV 218 (574)
Q Consensus 140 ~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 218 (574)
+.+..++ ++.+.+++.++..++..+ .|++|+++||+ +||..+.++.++.+++...+.+.+++ ...++++.
T Consensus 248 ~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-----g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 318 (437)
T TIGR00792 248 YFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-----GRKILFAGGILLMVLGYLIFFFAGSN---LPLILVLI 318 (437)
T ss_pred eEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHHHHHHHHHHHHHHHHcchh---HHHHHHHH
Confidence 4444445 455666666666665544 78899999985 45555556666666665555444322 33344555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhc-------ccCccchHHHHHHHHHHHHHHHHHHHHHhhccCCh
Q 008185 219 LLSNLGASITEVAKDALVAEYGQ-------KNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPP 276 (574)
Q Consensus 219 ~l~~~g~~~~~~~~~a~i~d~~~-------~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gw 276 (574)
++.+++.+.......++++|..+ ++.+|..+++.+....+|..+|+.++|++.+..|+
T Consensus 319 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 319 ILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 66667776666666778887754 34568889999999999999999999999876665
No 190
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.51 E-value=5.3e-07 Score=98.12 Aligned_cols=128 Identities=11% Similarity=-0.039 Sum_probs=94.1
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
..+.+|.++.+.++......++.+++.++.+++.||+++|+.+..+.++..+..++.. .. ++... +...
T Consensus 28 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~-~~---------~~~~~-l~~~ 96 (485)
T TIGR00711 28 IAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCG-VA---------PNLEL-MIIF 96 (485)
T ss_pred HHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHh-Cc---------CCHHH-HHHH
Confidence 3456899999999999999999999999999999999999998888776665544321 11 11111 1112
Q ss_pred HHHHHHHH-hhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcc
Q 008185 442 GLAETLAQ-FKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGIT 500 (574)
Q Consensus 442 ~l~~~~~~-~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~ 500 (574)
.+..+++. ........++.|.+|++.|+++++++.....+|..+|+.+++.+.+..|+.
T Consensus 97 ~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~ 156 (485)
T TIGR00711 97 RVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWR 156 (485)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCce
Confidence 22223332 223334677889999999999999999999999999999999998876653
No 191
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.50 E-value=3.6e-06 Score=89.64 Aligned_cols=156 Identities=13% Similarity=0.007 Sum_probs=99.8
Q ss_pred HHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhccc-CccchHHHHH
Q 008185 138 NFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFP-VAAKALPNLM 215 (574)
Q Consensus 138 ~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~-~~~~~~~~l~ 215 (574)
+.++.+++|.++.+.++......++..+ .++.|+++||+ +||..+.++.++..++..++...+ ........++
T Consensus 239 p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 313 (406)
T PRK15402 239 PVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-----PLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLT 313 (406)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHH
Confidence 4466777899999988876655555555 67889999985 444555556555544444443322 0011133344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHh-
Q 008185 216 ACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAIS- 294 (574)
Q Consensus 216 ~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~- 294 (574)
+..++.++|.+........... ...++++|+..+..+....+|..+|+.+++.+.+..++....+..++...+..+..
T Consensus 314 ~~~~~~g~g~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK15402 314 AGLSLYAFGIGLANAGLYRLTL-FSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVR 392 (406)
T ss_pred HHHHHHHHHHHHHhhhHHHHHh-hhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHH
Confidence 4555556666554443333332 33447899999999999999999999999999888888887777655555554443
Q ss_pred hhccc
Q 008185 295 FSARE 299 (574)
Q Consensus 295 ~~lpE 299 (574)
++.+.
T Consensus 393 ~~~~~ 397 (406)
T PRK15402 393 IFLKD 397 (406)
T ss_pred HHhcc
Confidence 34444
No 192
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.45 E-value=1.1e-06 Score=90.92 Aligned_cols=152 Identities=20% Similarity=0.175 Sum_probs=100.4
Q ss_pred hhhhHHHHHHhcCCChhHHHHHHHHhhhhh-hhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCcc---c
Q 008185 134 WLALNFHMAHNLSLHPSTLQLVQNSGNLPM-VAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAA---K 209 (574)
Q Consensus 134 ~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~-~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~---~ 209 (574)
...++.+++++|+.++.+++...+.+.+.- .+.|+.|+||||+ | +||..+. ....++++..++....+.. .
T Consensus 238 s~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~---G-g~rv~~~-~f~~~~~~~~~l~~~~~~~~~~~ 312 (417)
T COG2223 238 SAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI---G-GRRVTLA-VFVGMALAAALLSLFLTGFGHGG 312 (417)
T ss_pred HHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc---c-chhHHHH-HHHHHHHHHHHHHccccccccCc
Confidence 344556889999999999998888887654 5699999999997 4 4544443 4444455555555543211 1
Q ss_pred hHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCC-hhHHHHHHH
Q 008185 210 ALPNLM----ACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTP-PTTMFLVFA 284 (574)
Q Consensus 210 ~~~~l~----~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~g-wr~~f~i~a 284 (574)
.....+ ...++.++|.+. .-.++..+.+ ++.|.+.++..+...+|+..-|..-|...+..| +...|++..
T Consensus 313 ~~~~~~~~~l~l~~~~G~GnGs----vfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~ 387 (417)
T COG2223 313 SFVVFVAVFLALFVFAGLGNGS----VFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLL 387 (417)
T ss_pred chHHHHHHHHHHHHHhccCcch----heeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHH
Confidence 111111 222233344332 2344555554 466778888888888888888888888888777 999999998
Q ss_pred HHHHHHHHHhh
Q 008185 285 VLLSLQLAISF 295 (574)
Q Consensus 285 i~~~~~~~~~~ 295 (574)
...+++.+..+
T Consensus 388 ~~~~~a~v~~~ 398 (417)
T COG2223 388 AFYLVALVLTW 398 (417)
T ss_pred HHHHHHHHHHH
Confidence 88887777643
No 193
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.45 E-value=8.1e-05 Score=78.18 Aligned_cols=168 Identities=16% Similarity=0.115 Sum_probs=102.4
Q ss_pred HHHHHHHhhhccchhhhhHHHHHHh-cCCChhHHHHHHHHhhh---hhh-hhhhheeeccccccCCCccchhHhHHHHHH
Q 008185 120 CGLGYWVQGFRCFPWLALNFHMAHN-LSLHPSTLQLVQNSGNL---PMV-AKPLYGILSDALYIGGAHRIPYICIGVFLQ 194 (574)
Q Consensus 120 ~~~~~f~~~~~~~~~~~~~~~l~~~-~~~s~~~~~l~~s~~~l---~~~-~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~ 194 (574)
+++..|...+.- ..+.+.+|+.+. .|++.+++.= -++-+ .+. +-.+...++|.+ |-||.++++.+..
T Consensus 10 lc~~gf~~~frP-sEPfl~~yL~~~~kn~T~~qv~~--~i~Pv~tYSyl~~l~~vflltd~l-----~Ykpviil~~~~~ 81 (412)
T PF01770_consen 10 LCLFGFFKEFRP-SEPFLTPYLTGPDKNFTEEQVNN--EIYPVWTYSYLAFLLPVFLLTDYL-----RYKPVIILQALSY 81 (412)
T ss_pred HHHHHHHHhcCC-CCccchHHHcCCccCCCHHHHHH--hhhhHHHHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHHH
Confidence 444456656653 112222355554 7888777642 11111 111 122456789974 7889999888877
Q ss_pred HHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhc--
Q 008185 195 ILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLL-- 272 (574)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~-- 272 (574)
.+.+.++.+..+ ...+-+.-++-+++.+ ++++..+++--..++++-.++.+...++..+|-.+|.++|-.++.
T Consensus 82 i~t~~lll~~~s----v~~mq~~q~~yg~~~a-~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~ 156 (412)
T PF01770_consen 82 IITWLLLLFGTS----VLAMQLMQFFYGLATA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFG 156 (412)
T ss_pred HHHHHHHHHHCc----HHHHHHHHHHHHHHHH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 777776655532 3444445444454443 466777777777777666667777778778888888888887765
Q ss_pred cCChhHHHHHHHHHHHHHHHHhhhcccc
Q 008185 273 KTPPTTMFLVFAVLLSLQLAISFSAREE 300 (574)
Q Consensus 273 ~~gwr~~f~i~ai~~~~~~~~~~~lpEt 300 (574)
..+.+..+++......+.++..+++|..
T Consensus 157 ~~sy~~L~~isl~~~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 157 GVSYFQLNYISLASVSLALLIALFLPMP 184 (412)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4456777777665555555556677654
No 194
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.45 E-value=4.4e-06 Score=88.96 Aligned_cols=151 Identities=17% Similarity=0.105 Sum_probs=86.9
Q ss_pred HHHHhcCCChhHHHHHHHHhh-hhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHH---HhhcccCccchHHHH
Q 008185 140 HMAHNLSLHPSTLQLVQNSGN-LPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWG---PLALFPVAAKALPNL 214 (574)
Q Consensus 140 ~l~~~~~~s~~~~~l~~s~~~-l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~---~~~~~~~~~~~~~~l 214 (574)
++.+++|.++++.+++.+... ++..+ .++.|+++||+ +||+.+.++.....+... .++..+++ .+.+
T Consensus 235 ~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-----g~~~~l~~~~~~~~l~~l~~~~~~~~~~~---~~~~ 306 (402)
T PRK11902 235 FLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-----GLYRSLMLFGVLQAVSNLGYWVLAVTPKH---LWTM 306 (402)
T ss_pred HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHHhcCCc---HHHH
Confidence 556678999999999876543 34444 67889999985 344444444443333322 22233222 2223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHh
Q 008185 215 MACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAIS 294 (574)
Q Consensus 215 ~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~ 294 (574)
++..++..+..+.......+......+++..+..++.......+|.++++.++|.+.+..||++.|.+.++++++..++.
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 307 ALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 33333322222222222223333333333334455665556667777677789999999999999999888777665554
Q ss_pred hhcc
Q 008185 295 FSAR 298 (574)
Q Consensus 295 ~~lp 298 (574)
...+
T Consensus 387 ~~~~ 390 (402)
T PRK11902 387 WLMR 390 (402)
T ss_pred HHHh
Confidence 4333
No 195
>TIGR00898 2A0119 cation transport protein.
Probab=98.44 E-value=2.4e-06 Score=93.67 Aligned_cols=147 Identities=16% Similarity=-0.007 Sum_probs=98.3
Q ss_pred cCCChhHHHHHHHHhhhhhhhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHH
Q 008185 145 LSLHPSTLQLVQNSGNLPMVAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLG 224 (574)
Q Consensus 145 ~~~s~~~~~l~~s~~~l~~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g 224 (574)
++.+......+.++..+ ....+.++++||+ +||..+.++.++..++.+++...++.. ....++..++..++
T Consensus 353 ~~~~~~~~~~~~~~~~i--~~~~~~~~l~dr~-----grr~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~ 423 (505)
T TIGR00898 353 LGGNIYLDLFISGLVEL--PAKLITLLLIDRL-----GRRYTMAASLLLAGVALLLLLFVPVDL--YFLRTALAVLGKFG 423 (505)
T ss_pred cCCChHHHHHHHHHHHH--HHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHHcCCCc--hHHHHHHHHHHHHH
Confidence 45554444333332221 2244678899985 566666666666666666665554321 12223334444555
Q ss_pred HHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHhhhcccccc
Q 008185 225 ASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAISFSAREESL 302 (574)
Q Consensus 225 ~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~ 302 (574)
.+........+.+|..|++.|+.++++.+....+|.+++|.+.+ + ...++...+++.++..++..++.+++|||..
T Consensus 424 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 499 (505)
T TIGR00898 424 ITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFLPETKG 499 (505)
T ss_pred HHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 55444555677899999999999999999999999999999998 4 3457788888888777777777778899864
No 196
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.43 E-value=3.3e-06 Score=90.41 Aligned_cols=152 Identities=11% Similarity=0.072 Sum_probs=99.9
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhH
Q 008185 363 TQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAG 442 (574)
Q Consensus 363 ~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~ 442 (574)
.+.+|.+..+.+.......++..++.+..+.+.||+++|+++..+.++.+++.+... .. ++.+. +...-
T Consensus 43 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~-~a---------~~~~~-l~~~r 111 (413)
T PRK15403 43 VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATL-FT---------TSMTQ-FLIAR 111 (413)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHH-Hc---------CCHHH-HHHHH
Confidence 456899988888888888888888889999999999999998888766655443221 11 11111 11112
Q ss_pred HHHHHHHhhHHH-HHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHH
Q 008185 443 LAETLAQFKLLP-FSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLP 521 (574)
Q Consensus 443 l~~~~~~~~~~p-~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~ 521 (574)
+..+++.....+ ......|..|++++++.+++.++...+|..+||.+++.+.+..|+. ..+.+.++..++.
T Consensus 112 ~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~--------~~f~~~~~~~~i~ 183 (413)
T PRK15403 112 FIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWK--------VLFAIIAVMGLIA 183 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--------HHHHHHHHHHHHH
Confidence 222333221122 2355778889999999999999999999999999999988876643 2233333333333
Q ss_pred HHH-HHhcCCCHH
Q 008185 522 LIW-IHNVPMSET 533 (574)
Q Consensus 522 l~~-~~~vp~~~~ 533 (574)
++. .+.+||+++
T Consensus 184 ~~~~~~~lp~~~~ 196 (413)
T PRK15403 184 FVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHhCCCCcc
Confidence 333 456787643
No 197
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.43 E-value=4e-06 Score=88.87 Aligned_cols=126 Identities=15% Similarity=0.072 Sum_probs=86.9
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhH
Q 008185 363 TQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAG 442 (574)
Q Consensus 363 ~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~ 442 (574)
.+.+|+++.+.++......++..++..+.+++.||+++|+.+..+.++..+..+... .. ++.+. +....
T Consensus 35 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~-~~---------~~~~~-l~~~~ 103 (394)
T PRK11652 35 ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVAL-FA---------HSLTV-LIAAS 103 (394)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHH-HH---------ccHHH-HHHHH
Confidence 467999999999999999999999999999999999999988877666554433211 11 11111 11111
Q ss_pred HHHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 443 LAETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 443 l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
+..+++.....+. ..+..+..+++.++.+.++.+....++..++|.+++.+.+..|+
T Consensus 104 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~ 161 (394)
T PRK11652 104 AIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGW 161 (394)
T ss_pred HHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 1122221111222 34566778888899999999888889999999999988876654
No 198
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.43 E-value=1.7e-06 Score=94.87 Aligned_cols=127 Identities=8% Similarity=-0.002 Sum_probs=90.9
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhH
Q 008185 363 TQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAG 442 (574)
Q Consensus 363 ~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~ 442 (574)
.+.+|.++.+.++......++..+..+..+++.||+++|+++..+.++.++..+... .. ++.+..+. .-
T Consensus 33 ~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~-~a---------~~~~~li~-~r 101 (495)
T PRK14995 33 SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAA-FS---------PTASWLIA-TR 101 (495)
T ss_pred HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH-Hc---------CCHHHHHH-HH
Confidence 456898988999988888888888888999999999999999888777766554321 11 11111111 12
Q ss_pred HHHHHHHhhHHHH-HHHHHhh-cCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcc
Q 008185 443 LAETLAQFKLLPF-SMLLARL-CPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGIT 500 (574)
Q Consensus 443 l~~~~~~~~~~p~-~~l~~~~-~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~ 500 (574)
+..+++.....|. ...+.+. .|+++|++++|++.....+|..+||.+++.+.+..||.
T Consensus 102 ~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr 161 (495)
T PRK14995 102 ALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWG 161 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChH
Confidence 2333343334443 3444454 47789999999999999999999999999999987754
No 199
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.43 E-value=2e-06 Score=93.85 Aligned_cols=131 Identities=11% Similarity=-0.001 Sum_probs=92.2
Q ss_pred ceeehccc--cCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcc
Q 008185 358 MFCYQTQC--LNINPSVIGMSRVIGQSMLLSLTVFYDRYWKK-VPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNE 434 (574)
Q Consensus 358 ~~~~~~~~--~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r-~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~ 434 (574)
++.|+++. +|+++.+.|.......++..++..+.+++.|| +++|+.+..+.++.++..+.. .+. ++.
T Consensus 33 L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~-~~~---------~~~ 102 (475)
T TIGR00924 33 LAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFML-AMS---------IYP 102 (475)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHH-Hhc---------ccH
Confidence 44566665 89999999999888888999999999999999 899999888877766554321 111 111
Q ss_pred eEEeehhHHHHHHHHhhH-HHHHHHHHhhcCCCh---hHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 435 VFVLCFAGLAETLAQFKL-LPFSMLLARLCPQGC---EGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 435 ~~~l~~~~l~~~~~~~~~-~p~~~l~~~~~p~~~---~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
+ .+....+..+++.... .....+.++.+|++. |++++++++...++|..+|+.+++.+.+..|+
T Consensus 103 ~-~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~ 170 (475)
T TIGR00924 103 D-LIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGY 170 (475)
T ss_pred h-HHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 1 1111112222332222 233567788887654 88899999999999999999999999887664
No 200
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.42 E-value=3.5e-06 Score=91.91 Aligned_cols=125 Identities=13% Similarity=0.012 Sum_probs=85.9
Q ss_pred ehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeeh
Q 008185 361 YQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCF 440 (574)
Q Consensus 361 ~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~ 440 (574)
...+.+|++..+.|+......++..++.++.+++.+|+++|+.+..+.++..+..++. .+.. +... +..
T Consensus 61 ~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~-~~~~---------s~~~-l~~ 129 (476)
T PLN00028 61 IIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCM-SLVS---------SATG-FIA 129 (476)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH-HHhc---------CHHH-HHH
Confidence 3456799999999998888888899999999999999999998877666555443321 1111 1111 111
Q ss_pred hHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Q 008185 441 AGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASL 496 (574)
Q Consensus 441 ~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~ 496 (574)
..+..+++.....+....+.+.+|++.||++.|+.++..++|..+++.+.+.+...
T Consensus 130 ~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~ 185 (476)
T PLN00028 130 VRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPL 185 (476)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222222222344445678999999999999999998899998888777666543
No 201
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.41 E-value=3.7e-06 Score=101.68 Aligned_cols=147 Identities=16% Similarity=0.147 Sum_probs=104.2
Q ss_pred hhhHHHHHHhcCCChh-HHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHH
Q 008185 135 LALNFHMAHNLSLHPS-TLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALP 212 (574)
Q Consensus 135 ~~~~~~l~~~~~~s~~-~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~ 212 (574)
...+.++++.+|.+.. +.+++.++..++.++ .+++|+++||+ +++..+.++.++.+++..++....+ ..
T Consensus 253 ~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 323 (1146)
T PRK08633 253 ANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-----IELGLVPLGALGLALSLFLLPTAPS----LA 323 (1146)
T ss_pred HhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----eEccchhHHHHHHHHHHHHHHHhhh----HH
Confidence 3445577888999998 899988888877665 67889999984 3444454555555555555544432 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhc-cCChhHHHHHHHHHHHHH
Q 008185 213 NLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLL-KTPPTTMFLVFAVLLSLQ 290 (574)
Q Consensus 213 ~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~-~~gwr~~f~i~ai~~~~~ 290 (574)
.++++.++.+++.+...+...+++.+..++++||.++++.+....+|.++++.+++.+.. ..++...|++.+.+.++.
T Consensus 324 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 402 (1146)
T PRK08633 324 SVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIG 402 (1146)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 445556666677776666677888899999999999999999888999889888877654 245666777665554433
No 202
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.40 E-value=3.4e-06 Score=90.19 Aligned_cols=127 Identities=12% Similarity=0.023 Sum_probs=91.1
Q ss_pred ehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeeh
Q 008185 361 YQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCF 440 (574)
Q Consensus 361 ~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~ 440 (574)
.+++.+|.++.+.|+......++.+++....+++.||+++|+.+..+.++.++..++...... .++.+ .+..
T Consensus 28 ~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~-------~~~~~-~~l~ 99 (410)
T TIGR00885 28 QFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAE-------IMNYT-LFLV 99 (410)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHh-------hccHH-HHHH
Confidence 446789999999999999999999999999999999999999998887776665433211100 01111 1111
Q ss_pred hHHHHHHH-HhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 008185 441 AGLAETLA-QFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLAS 495 (574)
Q Consensus 441 ~~l~~~~~-~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~ 495 (574)
..+..+++ +....+...++.+..|++.+++..++.+...++|..+|+.+++.+..
T Consensus 100 ~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~ 155 (410)
T TIGR00885 100 GLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLIL 155 (410)
T ss_pred HHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 12222222 23333345667788899999999999999999999999999988764
No 203
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.39 E-value=2.1e-06 Score=75.69 Aligned_cols=110 Identities=16% Similarity=0.098 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHH
Q 008185 379 IGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSML 458 (574)
Q Consensus 379 ~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l 458 (574)
...++.+++..+.+++.||+++|+.+..+.++..+..+.. ... ++.+.......+.....+........+
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~ 75 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMF-ALS---------SNITVLIIARFLQGFGAAFALVAGAAL 75 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHH-HHh---------ccHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 3456777788888899999999998877766555443321 111 111111111112211112222333567
Q ss_pred HHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Q 008185 459 LARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 459 ~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g 498 (574)
..|..|++++++++++.+...++|..+++.+.+.+.+..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 115 (141)
T TIGR00880 76 IADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLG 115 (141)
T ss_pred HHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc
Confidence 8899999999999999999999999999999998876554
No 204
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.39 E-value=1e-05 Score=87.81 Aligned_cols=172 Identities=17% Similarity=0.133 Sum_probs=115.1
Q ss_pred HhhhccchhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhc-
Q 008185 126 VQGFRCFPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLAL- 203 (574)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~- 203 (574)
..++..+...+. .+.++++|++..+...+.-+..+..++ ..++|++.||+ |.++|+.+.++..+..+......+
T Consensus 294 ~dg~~ti~~~~~-i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~---g~k~~~~l~~~l~~~~~i~~~g~~G 369 (477)
T PF11700_consen 294 SDGVNTIISFAG-IYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF---GPKTKRTLLISLILWIIIPLYGLFG 369 (477)
T ss_pred HHHHHHHHHHHH-HHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCchhHHHHHHHHHHHHHHHHHHHH
Confidence 444444333333 367878999999877666555554444 55789999986 545445555444433222222221
Q ss_pred -ccCc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCC-hhHH
Q 008185 204 -FPVA--AKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTP-PTTM 279 (574)
Q Consensus 204 -~~~~--~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~g-wr~~ 279 (574)
..+. ...-+.+.++-++.++..+.......++++++.|+++.+..+|++....-....+||++-|.+.+..| -|+.
T Consensus 370 ~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g 449 (477)
T PF11700_consen 370 FWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYG 449 (477)
T ss_pred hhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH
Confidence 1000 11123344555555666666666778999999999888999999999999999999999999998776 8898
Q ss_pred HHHHHHHHHHHHHHhhhccccc
Q 008185 280 FLVFAVLLSLQLAISFSAREES 301 (574)
Q Consensus 280 f~i~ai~~~~~~~~~~~lpEt~ 301 (574)
++...++.++.+++.+++++++
T Consensus 450 ~~~l~~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 450 FLFLLVLFLIGLILLFFVDVEK 471 (477)
T ss_pred HHHHHHHHHHHHHHHhhccchh
Confidence 8888777777776667777654
No 205
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.38 E-value=6.5e-06 Score=88.54 Aligned_cols=126 Identities=10% Similarity=-0.040 Sum_probs=82.5
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhH
Q 008185 363 TQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAG 442 (574)
Q Consensus 363 ~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~ 442 (574)
...+|+|+.+.+++.....++..+.....+++.||+|.|+++.++.++..+..+.....+... .++ +..+....
T Consensus 62 ~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~-----~~s-~~~lli~r 135 (462)
T PRK15034 62 KIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNP-----NTP-FGIFIVIA 135 (462)
T ss_pred hhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccc-----CCC-HHHHHHHH
Confidence 346999999999887766666666666779999999999998888776654443221111000 011 11111112
Q ss_pred HHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 008185 443 LAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLA 494 (574)
Q Consensus 443 l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~ 494 (574)
+..++++..+.+....+++.+|++++|++.|+.....++|..+++.+...+.
T Consensus 136 ~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i 187 (462)
T PRK15034 136 LLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVI 187 (462)
T ss_pred HHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 2222334455566677899999999999999998888888887766665433
No 206
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.37 E-value=8.7e-06 Score=86.63 Aligned_cols=156 Identities=14% Similarity=0.109 Sum_probs=107.3
Q ss_pred ehccccCCCchh-HHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEee
Q 008185 361 YQTQCLNINPSV-IGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLC 439 (574)
Q Consensus 361 ~~~~~~g~s~~~-~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~ 439 (574)
++.+.+|+++.+ .|.++.....+-.+.....+.+.||++.|+++.++.+...+..++..+ .. .+..+.
T Consensus 51 ~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~f-a~----------Sl~~L~ 119 (511)
T TIGR00806 51 YLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLL-GT----------SVWHMQ 119 (511)
T ss_pred HHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-HH----------HHHHHH
Confidence 445689999999 999988888888888888899999999999998887777665543321 11 111111
Q ss_pred hhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHH
Q 008185 440 FAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAAL 519 (574)
Q Consensus 440 ~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~l 519 (574)
..-+..++++....+...++...+|+++|+++.|+.++...+|.++++.+++. ...+|+. .|. .+..+......
T Consensus 120 i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr--~y~---~Ln~Isl~s~~ 193 (511)
T TIGR00806 120 LMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWI--SYS---TLNIISLVFMT 193 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCch--hHH---HHHHHHHHHHH
Confidence 11122233332222667788999999999999999999999999999999988 4445643 333 33334444444
Q ss_pred HHHHHHHhcCCCHH
Q 008185 520 LPLIWIHNVPMSET 533 (574)
Q Consensus 520 l~l~~~~~vp~~~~ 533 (574)
+++++.+++|..++
T Consensus 194 ~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 194 FSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHhCCCCch
Confidence 55666677775444
No 207
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.36 E-value=4.7e-06 Score=91.18 Aligned_cols=131 Identities=10% Similarity=-0.004 Sum_probs=89.6
Q ss_pred eeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEE
Q 008185 359 FCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKK-VPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFV 437 (574)
Q Consensus 359 ~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r-~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~ 437 (574)
..|.++.+|++..+.+...........+...+.+++.|| +|+|+.+.++.+++++..++.. +.. + ....
T Consensus 38 ~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~-~~~--~-----~~~l-- 107 (489)
T PRK10207 38 AVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTG-MSL--L-----KPDL-- 107 (489)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-Hhc--c-----chhH--
Confidence 345667799998888776655555555556678999999 9999999999888776654322 111 0 0011
Q ss_pred eehhHHHHHHHHhhHHH-HHHHHHhhcCCC--hhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 438 LCFAGLAETLAQFKLLP-FSMLLARLCPQG--CEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 438 l~~~~l~~~~~~~~~~p-~~~l~~~~~p~~--~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
+.......+++.....| ..+++.|.+|++ .|+.+++++....++|..+||.+++.+.+.+|+
T Consensus 108 l~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw 172 (489)
T PRK10207 108 IFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGY 172 (489)
T ss_pred HHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhCh
Confidence 11122223344333333 357788999877 457889999999999999999999999998764
No 208
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.35 E-value=5.9e-06 Score=89.72 Aligned_cols=133 Identities=15% Similarity=-0.067 Sum_probs=91.6
Q ss_pred cceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC-CchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcce
Q 008185 357 SMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKV-PLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEV 435 (574)
Q Consensus 357 ~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~-~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~ 435 (574)
.++.|+++.+|+++.+.+.......+...++..+.+++.||+ |+|+.+.++.++.++..++. ... .. ....
T Consensus 31 ~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll-~~~-~~------~~~~ 102 (493)
T PRK15462 31 LLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVL-GAS-EI------HPSF 102 (493)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHH-HHh-hc------chhH
Confidence 344566677999999999888887788888888899999999 99998888877766554321 110 00 0011
Q ss_pred EEeehhHHHHHHHHhhHHH-HHHHHHhhcCCC--hhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 436 FVLCFAGLAETLAQFKLLP-FSMLLARLCPQG--CEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 436 ~~l~~~~l~~~~~~~~~~p-~~~l~~~~~p~~--~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
..+ ......++.....| ..+++.|.+|++ .|+++++++....++|..++|.+.+.+.+..|+
T Consensus 103 ~~l--~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw 167 (493)
T PRK15462 103 LYL--SLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSW 167 (493)
T ss_pred HHH--HHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhCh
Confidence 111 11111122222223 356789999875 699999999999999999999999999887764
No 209
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.34 E-value=9.9e-06 Score=88.56 Aligned_cols=159 Identities=11% Similarity=0.141 Sum_probs=112.0
Q ss_pred chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccch
Q 008185 132 FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKA 210 (574)
Q Consensus 132 ~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~ 210 (574)
++..-++.+.+ ..+.+..++..+.++..+.-.+ .+++|+++|+.+ .+++.+..++.+...++...+....+
T Consensus 316 ~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~---~~~~~~~~~~ll~~gl~~~~~p~~~~---- 387 (509)
T KOG2504|consen 316 VPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPG---IRALVLFLLTLLIAGLARLFLPFATT---- 387 (509)
T ss_pred HHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccc---cchHHHHHHHHHHHHHHHHHHHHhcc----
Confidence 45555555655 5899999999999888776555 889999999852 13333444455555555544444432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHH
Q 008185 211 LPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTP-PTTMFLVFAVLLSL 289 (574)
Q Consensus 211 ~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~g-wr~~f~i~ai~~~~ 289 (574)
+..++..-.+.+++.+.......-.+.|+...++-..+.|+......++.++||.++|.+.+..| |...|+.+++..++
T Consensus 388 ~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~ 467 (509)
T KOG2504|consen 388 YVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLL 467 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHH
Confidence 44444444444444444443334567888888888899999999999999999999999888777 99999999888877
Q ss_pred HHHHhhhcc
Q 008185 290 QLAISFSAR 298 (574)
Q Consensus 290 ~~~~~~~lp 298 (574)
..+..+..+
T Consensus 468 s~~~~~~~~ 476 (509)
T KOG2504|consen 468 SAVLLLILR 476 (509)
T ss_pred HHHHHHHhH
Confidence 776665555
No 210
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.34 E-value=8.5e-06 Score=79.79 Aligned_cols=149 Identities=13% Similarity=0.133 Sum_probs=95.9
Q ss_pred HHHHhcCCChhHHHHHHHHh-hhhhhhhhhheeeccccccCCCccchhHh-HHHHHHHHHHHHhhcccCccchHHHHHHH
Q 008185 140 HMAHNLSLHPSTLQLVQNSG-NLPMVAKPLYGILSDALYIGGAHRIPYIC-IGVFLQILSWGPLALFPVAAKALPNLMAC 217 (574)
Q Consensus 140 ~l~~~~~~s~~~~~l~~s~~-~l~~~~~pl~G~lsD~~~~~G~rRk~~l~-i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 217 (574)
+.++.||+|+..++-+.+.. .+.....|++|.++|++ +|+.+.+ .+.+...++=..+.+..-++ ...
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-----G~n~~wv~~a~~~tl~~H~~l~Ft~lsP------y~~ 358 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-----GFNLWWVASACILTLLGHSGLFFTFLSP------YTS 358 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-----cceehhHHHHHHHHHHHhhhHHhhhccH------HHH
Confidence 45677999999988777654 45566799999999984 5555443 33333333333333322111 233
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCC---hhHHHHHHHHHHHHHHHHh
Q 008185 218 VLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTP---PTTMFLVFAVLLSLQLAIS 294 (574)
Q Consensus 218 ~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~g---wr~~f~i~ai~~~~~~~~~ 294 (574)
..+.++..+........+++-+.|+++-|.+.+..+...++|-.+-|+++|++.+.-| |--.|.+......+..+..
T Consensus 359 m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgi 438 (459)
T KOG4686|consen 359 MTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGI 438 (459)
T ss_pred HHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 4444444444443345667778888899999999999999999999999999987654 5556666544444444433
Q ss_pred -hhccc
Q 008185 295 -FSARE 299 (574)
Q Consensus 295 -~~lpE 299 (574)
+.+..
T Consensus 439 l~~~N~ 444 (459)
T KOG4686|consen 439 LFYLNK 444 (459)
T ss_pred Hhheec
Confidence 44433
No 211
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.33 E-value=3.2e-06 Score=91.43 Aligned_cols=171 Identities=11% Similarity=0.058 Sum_probs=105.8
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh----cCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccC--c--Ccc
Q 008185 363 TQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWK----KVPLRKLVGAVQILYASSLLLDLILVRQINLQFG--V--PNE 434 (574)
Q Consensus 363 ~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~----r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~--~--~~~ 434 (574)
.+.+|.++...++......+..++..++.+++.| |+|+|+.++.+..+..+..+..+..........+ . ...
T Consensus 31 l~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~ 110 (477)
T TIGR01301 31 VQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTK 110 (477)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccch
Confidence 4569999999999999999999999999999998 5999999876544433333322222111000000 0 000
Q ss_pred ----eEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChh--HHHHHHHHHHHHhHHHHHHHHHHHH--HHhhCcccCC---
Q 008185 435 ----VFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCE--GSLTSFSASALCLSSIASGFLGVGL--ASLTGITFGD--- 503 (574)
Q Consensus 435 ----~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~--gt~~gl~~~~~~lg~~lg~~i~g~l--~~~~g~~~~~--- 503 (574)
++.+....+..+..+....|..++++|.+|+++| +.+++..+...++|+.+|+.+++.. .+.++....+
T Consensus 111 ~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~ 190 (477)
T TIGR01301 111 PRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACG 190 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccc
Confidence 1111111122233345556778899999998865 6789999999999999999999976 3334432111
Q ss_pred --CCChhHHHHHHHHHHHHHHHH-HHhcCCCHH
Q 008185 504 --YSSLPVGIVIQFLAALLPLIW-IHNVPMSET 533 (574)
Q Consensus 504 --~~~l~~~~li~~~~~ll~l~~-~~~vp~~~~ 533 (574)
..++...+.+.+++.+++..+ ++.+||...
T Consensus 191 ~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 191 VSCANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 123445556666555554444 467777654
No 212
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.33 E-value=8.2e-06 Score=98.70 Aligned_cols=151 Identities=13% Similarity=0.017 Sum_probs=103.2
Q ss_pred hhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhccc-C----c--
Q 008185 136 ALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFP-V----A-- 207 (574)
Q Consensus 136 ~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~-~----~-- 207 (574)
..+.++++.+|.++.+.+++.+.+.++.++ +++.|.++|+. .+++ .+..+.++..++.+.+++.. . .
T Consensus 247 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~----~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 321 (1140)
T PRK06814 247 QLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR----ITLL-YVPIGALLMGLFGLDLAFASSSVPAEPAQ 321 (1140)
T ss_pred HhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc----eeee-eehHHHHHHHHHHHHHHhccccccccccc
Confidence 355678888999999999999999888776 66789999863 1233 23323333333222222210 0 0
Q ss_pred ---------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhc-cCChh
Q 008185 208 ---------AKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLL-KTPPT 277 (574)
Q Consensus 208 ---------~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~-~~gwr 277 (574)
....+.+++..++.+++.+...+...+++.+..++++||+++|+.++...+|..+|++++|.+.. ..++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~ 401 (1140)
T PRK06814 322 LKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIP 401 (1140)
T ss_pred ccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHH
Confidence 01123345555666777777777778899999999999999999999999999999999998863 45778
Q ss_pred HHHHHHHHHHHHHH
Q 008185 278 TMFLVFAVLLSLQL 291 (574)
Q Consensus 278 ~~f~i~ai~~~~~~ 291 (574)
+.|++.+++.++..
T Consensus 402 ~~~~~~~~~~~~~~ 415 (1140)
T PRK06814 402 WIILFIALANLIVA 415 (1140)
T ss_pred HHHHHHHHHHHHHH
Confidence 87776665544433
No 213
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.33 E-value=0.00014 Score=76.45 Aligned_cols=309 Identities=16% Similarity=0.107 Sum_probs=152.9
Q ss_pred hhhhhh-hhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008185 159 GNLPMV-AKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVA 237 (574)
Q Consensus 159 ~~l~~~-~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~ 237 (574)
-.+|.. .+.++-+..+|+| |+.|.+. ...+..+++++.++.++ .+.-+++-.+.+++.+..++...++..
T Consensus 68 di~P~l~~Kl~aP~fi~~v~---y~~Ri~~--~~~l~~~g~l~va~~~~----v~~~l~Gv~las~ssg~GE~tfL~lt~ 138 (402)
T PF02487_consen 68 DILPSLLVKLIAPFFIHRVP---YWIRILI--CVALSAAGMLLVAFSPS----VWVRLLGVVLASLSSGLGEVTFLSLTH 138 (402)
T ss_pred HHHHHHHHHHHhHhhhhhcc---chHHHHH--HHHHHHHHHhheeeccc----hhHHHHHHHHHhhhhhhhHHHHHHHHH
Confidence 344543 3555555677763 5555444 44566677776666532 333455566677777777776666544
Q ss_pred hhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhc-cCChhHHHHHHHHHHHHHHHHhh-hcccccc--cccccchhcc-
Q 008185 238 EYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLL-KTPPTTMFLVFAVLLSLQLAISF-SAREESL--GLAQVSYQNV- 312 (574)
Q Consensus 238 d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~-~~gwr~~f~i~ai~~~~~~~~~~-~lpEt~~--~~~~~~~~~~- 312 (574)
..++ ...+.+..+...++++|+..--.+.. ..+.|..+.+...++++..+..+ .+|.++. +..+.+.++.
T Consensus 139 -~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~~ 213 (402)
T PF02487_consen 139 -FYGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDEA 213 (402)
T ss_pred -hcCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCcc
Confidence 3222 23455666666788888877655555 24457788887777766655544 3443221 1111000000
Q ss_pred -----hhh--------hhhhhHHHHHHHHHHHHcchhhHHHHHHHHh-HhhhcccccccceeehccccCCCchhHHHHHH
Q 008185 313 -----ASK--------SIAQSIKKQFSDLIATIGEESISYPLTWLVA-SVAMVPVLSGSMFCYQTQCLNINPSVIGMSRV 378 (574)
Q Consensus 313 -----~~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l-~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i 378 (574)
+.+ ......++.++..+.++. ...++....+ -|.+.+...... .+.....-...++-+..+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~---ymiPL~lVY~aEY~InqGv~~tl--~fp~~~~~~r~~Y~~Y~~ 288 (402)
T PF02487_consen 214 EDDLLESETSESKPDSSSKLSFKEKLKRLKPLLW---YMIPLFLVYFAEYFINQGVAPTL--LFPNSFFSPRDQYRWYQL 288 (402)
T ss_pred cccccccccccccccccchhhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhchHHHh--cCCccCCCHHHHHHHHHH
Confidence 000 001112222222222221 2222221111 233333332222 122222222456667777
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHH
Q 008185 379 IGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSML 458 (574)
Q Consensus 379 ~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l 458 (574)
...+|.+++--... + +..|++.+.+ ++..+-.++ +.+ ..+. ..+++.|.++......+.+++...+-....
T Consensus 289 ~YQ~GVFISRSS~~-~---~rir~lwils-~LQ~~nl~~-~~l-~s~~--~fipsi~ivf~lif~eGLlGGa~YVNtF~~ 359 (402)
T PF02487_consen 289 LYQLGVFISRSSLP-F---FRIRRLWILS-LLQVINLVF-LLL-QSWY--RFIPSIWIVFVLIFYEGLLGGASYVNTFYR 359 (402)
T ss_pred HHHHHHhhhhccee-e---eehhhHHHHH-HHHHHHHHH-HHH-HHHH--HHhhHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 78888777633221 1 1224443333 222221111 111 1111 013444433333333444555666655666
Q ss_pred HHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 008185 459 LARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLAS 495 (574)
Q Consensus 459 ~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~ 495 (574)
+.+..|+++|.-.+|.......+|..++..++-.+-.
T Consensus 360 I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 360 ISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 7778889999999999888888888887777655443
No 214
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.33 E-value=6.5e-06 Score=85.90 Aligned_cols=129 Identities=18% Similarity=0.101 Sum_probs=86.4
Q ss_pred hHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHH
Q 008185 137 LNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLM 215 (574)
Q Consensus 137 ~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 215 (574)
.+.++++ .|.+..+.+...++..++..+ .++.|+++||+ + +||..+.++..+..++...+.+..+.. . .
T Consensus 220 lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~ 289 (355)
T TIGR00896 220 LPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRV---K-DQRGIVAVLAVLQLVGLCGLLFAPMHG--L---W 289 (355)
T ss_pred HHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhh---c-cchHHHHHHHHHHHHHHHHHHHhhhhH--H---H
Confidence 4446665 799999999999888877665 78899999985 2 455555556555566655555443321 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc-ccCccchHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008185 216 ACVLLSNLGASITEVAKDALVAEYGQ-KNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTP 275 (574)
Q Consensus 216 ~~~~l~~~g~~~~~~~~~a~i~d~~~-~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~g 275 (574)
....+.+++.+...+...+.+.+..+ +++++..+++.+....+|..+||.++|++.+..|
T Consensus 290 ~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 290 AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22334455555544444455555544 4566888888888888899999999999988765
No 215
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.32 E-value=1.6e-05 Score=87.28 Aligned_cols=162 Identities=12% Similarity=0.088 Sum_probs=103.1
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCc-ceEEeehhHHHH
Q 008185 367 NINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPN-EVFVLCFAGLAE 445 (574)
Q Consensus 367 g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~-~~~~l~~~~l~~ 445 (574)
..+..+.++......++.+++.++.+++.||+|+|+.+.++.++..+..++.. +... . .+. .+..+...-+..
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~-~~~~----~-~~~~~~~~~~~~r~l~ 125 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASG-LSPG----S-SPKSVMATLCFWRFWL 125 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH-HccC----c-ccchHHHHHHHHHHHH
Confidence 34556778888888999999999999999999999998877766665543221 1110 0 000 011111112222
Q ss_pred HHH-HhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcc----c----------CCC-CChhH
Q 008185 446 TLA-QFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGIT----F----------GDY-SSLPV 509 (574)
Q Consensus 446 ~~~-~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~----~----------~~~-~~l~~ 509 (574)
+++ +....+..++++|.+|++.||++.++.+....+|..+++.++..+...+... . ... .+...
T Consensus 126 G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~ 205 (502)
T TIGR00887 126 GVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRI 205 (502)
T ss_pred HHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHH
Confidence 233 2333445688999999999999999999999999999998887766533210 0 000 12334
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCHHH
Q 008185 510 GIVIQFLAALLPLIWIHNVPMSETI 534 (574)
Q Consensus 510 ~~li~~~~~ll~l~~~~~vp~~~~~ 534 (574)
.+.+.++..++.+++.+++||...-
T Consensus 206 ~~~~~~ip~~i~~~~~~~lpESpr~ 230 (502)
T TIGR00887 206 LIGFGAVPALLALYFRLTIPETPRY 230 (502)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHH
Confidence 4455555555566666789998653
No 216
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.29 E-value=1e-05 Score=88.80 Aligned_cols=158 Identities=11% Similarity=-0.025 Sum_probs=93.5
Q ss_pred Hcchh-hHHHHHHHHhHhhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHHH
Q 008185 332 IGEES-ISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKK-VPLRKLVGAVQI 409 (574)
Q Consensus 332 ~~~~~-v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r-~~~r~ll~~~~l 409 (574)
+++|+ ++..+...+......+......+.|.++.+|+++.+.+...............+.+++.|| +++|+.+..+.+
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~ 96 (500)
T PRK09584 17 FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAI 96 (500)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 34553 4333333333222223333344557778899998887776555444444444678899999 599999888877
Q ss_pred HHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHH-HHHHHHhhcCCCh--hHHHHHHHHHHHHhHHHHH
Q 008185 410 LYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLP-FSMLLARLCPQGC--EGSLTSFSASALCLSSIAS 486 (574)
Q Consensus 410 l~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p-~~~l~~~~~p~~~--~gt~~gl~~~~~~lg~~lg 486 (574)
+.++..++. .+.. +....+....+..+++.....| ...++.+.+|++. ++.++++++...++|..+|
T Consensus 97 ~~~ig~~l~-~~~~---------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~g 166 (500)
T PRK09584 97 VLAIGYALV-AWSG---------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFS 166 (500)
T ss_pred HHHHHHHHH-HHhc---------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHH
Confidence 666543322 1110 0110011111222233222223 3467888887643 4567899999999999999
Q ss_pred HHHHHHHHHhhCc
Q 008185 487 GFLGVGLASLTGI 499 (574)
Q Consensus 487 ~~i~g~l~~~~g~ 499 (574)
|.++|.+.+..|+
T Consensus 167 p~i~g~l~~~~g~ 179 (500)
T PRK09584 167 MLATPWLAAKYGW 179 (500)
T ss_pred HHHHHHHHHhhCH
Confidence 9999999987764
No 217
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.28 E-value=1.7e-06 Score=97.55 Aligned_cols=170 Identities=14% Similarity=0.073 Sum_probs=110.5
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhccc------------
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQF------------ 429 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~------------ 429 (574)
..+.++++..+.|++.....++.+++..+.+++.+|.++++.+.++.+++++..++.. +.......+
T Consensus 59 iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~a-lphf~~~~y~~~~~~~~~~~~ 137 (633)
T TIGR00805 59 IERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLS-LPHFLSGRYSYSTTVSSTGNL 137 (633)
T ss_pred hhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHh-ChHHhcCCccccccccccccc
Confidence 3456999999999998899999999999999999999999998888877776655432 211000000
Q ss_pred ----------C----------------cC--c-ceEEeehhHHHHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHH
Q 008185 430 ----------G----------------VP--N-EVFVLCFAGLAETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASAL 479 (574)
Q Consensus 430 ----------~----------------~~--~-~~~~l~~~~l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~ 479 (574)
. .. . .+..+...-+..+++.....+. .+++.|..|++.++.+.|+++...
T Consensus 138 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~ 217 (633)
T TIGR00805 138 SSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIA 217 (633)
T ss_pred cccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHH
Confidence 0 00 0 1111222223333333333333 578899999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHhh-Cc----------ccCCCC---ChhHHHHHHHHHHHHHHHHHHhcCCCH
Q 008185 480 CLSSIASGFLGVGLASLT-GI----------TFGDYS---SLPVGIVIQFLAALLPLIWIHNVPMSE 532 (574)
Q Consensus 480 ~lg~~lg~~i~g~l~~~~-g~----------~~~~~~---~l~~~~li~~~~~ll~l~~~~~vp~~~ 532 (574)
.+|.++|+.+++.+.+.+ ++ +..|.. ..|..+++.+++.++..+.++++|++.
T Consensus 218 ~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~l 284 (633)
T TIGR00805 218 VFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKAL 284 (633)
T ss_pred HhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 999999999999988754 22 112222 134446666665555444456666543
No 218
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.28 E-value=0.0006 Score=73.60 Aligned_cols=260 Identities=9% Similarity=0.026 Sum_probs=127.5
Q ss_pred HHHhcCC-----ChhHHHHHHHHhhhhhhh--hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcc--cCccc--
Q 008185 141 MAHNLSL-----HPSTLQLVQNSGNLPMVA--KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALF--PVAAK-- 209 (574)
Q Consensus 141 l~~~~~~-----s~~~~~l~~s~~~l~~~~--~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~--~~~~~-- 209 (574)
++|.+.+ +.+++.++-+...+|.++ .|+++.+++|+ .|+|.+ -+......+.+.+.++. +....
T Consensus 29 lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~----~~~~lf-~~~~~~F~~~f~lF~~vl~p~~~~~~ 103 (472)
T TIGR00769 29 TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL----SKEALF-YTVISPFLGFFALFAFVIYPLSDLLH 103 (472)
T ss_pred hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC----CHHHhH-HHHHHHHHHHHHHHHHHHhcchhhcC
Confidence 5666655 447888888888887644 68999999986 234333 22222222222222222 11100
Q ss_pred --------------h---------HHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHH
Q 008185 210 --------------A---------LPNLMACVLLS-NLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNL 265 (574)
Q Consensus 210 --------------~---------~~~l~~~~~l~-~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~ 265 (574)
. .+...++.+.. -+|.-.......+++.|.++.+|..+..++...+.++|.++|+.
T Consensus 104 p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~ 183 (472)
T TIGR00769 104 PTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGR 183 (472)
T ss_pred CcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 01111222222 23333333355788999999999999999999999999999998
Q ss_pred HHHHhhc--------cCChh----HHHHHHHHHHHHHHHHhhhc-cccccccc-ccchhcchhhhhhhhHHHHHHHHHHH
Q 008185 266 FGGYFLL--------KTPPT----TMFLVFAVLLSLQLAISFSA-REESLGLA-QVSYQNVASKSIAQSIKKQFSDLIAT 331 (574)
Q Consensus 266 igg~l~~--------~~gwr----~~f~i~ai~~~~~~~~~~~l-pEt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (574)
+..++.+ .-.|. +.+.+.++...+...+...+ ++....+. ...+++.+++..+....+ .++.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~k~k~~~~e---s~k~i 260 (472)
T TIGR00769 184 TIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYNPALKEKKVKPKMSTME---SLKFL 260 (472)
T ss_pred HHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhccccCCCCCCHHH---HHHHH
Confidence 8888762 12342 23333332222222222222 22111110 000000000111112222 33445
Q ss_pred HcchhhHHHHHHHHhHhhhcccccccce-eehccccCCCch----hHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHH
Q 008185 332 IGEESISYPLTWLVASVAMVPVLSGSMF-CYQTQCLNINPS----VIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGA 406 (574)
Q Consensus 332 ~~~~~v~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~g~s~~----~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~ 406 (574)
++.|.++...+++.+ |.+...+.+... -...+.+ -++. ..|-.....++.+++...+.+++.+|+|.+....+
T Consensus 261 ~~S~yL~~ia~~vi~-y~~~~nlve~~~k~~v~~~~-p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i 338 (472)
T TIGR00769 261 VSSPYILDLALLVIA-YGISINLVEVTWKSKLKAQY-PSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALI 338 (472)
T ss_pred HhCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 777877766665554 433322221110 0001112 1222 23444444455554445555899999998866554
Q ss_pred HHHH
Q 008185 407 VQIL 410 (574)
Q Consensus 407 ~~ll 410 (574)
.-++
T Consensus 339 ~Pii 342 (472)
T TIGR00769 339 TPLV 342 (472)
T ss_pred HHHH
Confidence 4443
No 219
>PRK09848 glucuronide transporter; Provisional
Probab=98.27 E-value=6.3e-06 Score=89.11 Aligned_cols=133 Identities=17% Similarity=0.078 Sum_probs=88.8
Q ss_pred hHHHHHHhcCCChhHHHHHHHHhhhhhh-hhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHH
Q 008185 137 LNFHMAHNLSLHPSTLQLVQNSGNLPMV-AKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLM 215 (574)
Q Consensus 137 ~~~~l~~~~~~s~~~~~l~~s~~~l~~~-~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 215 (574)
.+++.++.+|.++...++......++.. ..|++++++||+ ++|+.+.++..+.+++...+.+.+.+ ..+.++
T Consensus 251 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-----g~~~~~~~g~~~~~i~~~~~~~~~~~--~~~~~~ 323 (448)
T PRK09848 251 SLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-----GKKNTFLIGALLGTCGYLLFFWVSVW--SLPVAL 323 (448)
T ss_pred heeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHHHHHHHHHHHHHHHHcCch--hHHHHH
Confidence 3446677778766655554443344444 478899999985 45555556766666655555444322 233444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccc-------CccchHHHHHHHHHHHHHHHHHHHHHhhccCCh
Q 008185 216 ACVLLSNLGASITEVAKDALVAEYGQKN-------GIVGLQSYAFMAAASGGILGNLFGGYFLLKTPP 276 (574)
Q Consensus 216 ~~~~l~~~g~~~~~~~~~a~i~d~~~~~-------~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gw 276 (574)
+..++.++|.+.......++.+|..+.+ ++|..+++.+....+|..+|+.+.|.+.+..|+
T Consensus 324 ~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 324 VALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5566677787777777788888887642 348888888888899999999999988765554
No 220
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.25 E-value=2.7e-05 Score=80.02 Aligned_cols=137 Identities=15% Similarity=0.003 Sum_probs=88.9
Q ss_pred HHHHH--hcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHH
Q 008185 139 FHMAH--NLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLM 215 (574)
Q Consensus 139 ~~l~~--~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 215 (574)
.|+++ .+|+++.+.++..+.+..++.+ ..+.++++||+ | +++++.++..+..+...+....+ . .. ..
T Consensus 165 ~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~---g--~~~~l~~~~~l~~~~~~l~~~~~-~---~~-~~ 234 (310)
T TIGR01272 165 NFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI---S--QGRYLAFNAFLAVLLSIGAALTH-G---YV-AM 234 (310)
T ss_pred HHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---C--HHHHHHHHHHHHHHHHHHHHHcC-C---HH-HH
Confidence 36664 3799999999999998888877 55789999996 3 33345555555555444333332 2 11 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHH
Q 008185 216 ACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLL 287 (574)
Q Consensus 216 ~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~ 287 (574)
...++.+++.+...+...+...+..++ +.+.+.++. ....+|..++|.+.|.+.+..|.+..|++..+..
T Consensus 235 ~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~~ 304 (310)
T TIGR01272 235 WFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPCY 304 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 333345666666665555555555443 234455554 4566899999999999999899999998654433
No 221
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.25 E-value=2.8e-05 Score=82.73 Aligned_cols=161 Identities=17% Similarity=0.207 Sum_probs=103.0
Q ss_pred chhhhhHHHHHHhcC-CChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccc
Q 008185 132 FPWLALNFHMAHNLS-LHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAK 209 (574)
Q Consensus 132 ~~~~~~~~~l~~~~~-~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~ 209 (574)
..+.....|+++ .| .+....+...++..+.=+. -.+.+++..|+ +-+..+.++.+..++=+.+.+...++.
T Consensus 225 ~~~~f~~~yl~~-~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-----g~~~ll~~a~~~~~vR~~l~a~~~~~~- 297 (400)
T PF03825_consen 225 AYYTFFSIYLQE-LGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-----GIKWLLLLALVAYAVRWLLYAYFSDPW- 297 (400)
T ss_pred HHHHHHHHHHHH-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CHHHHHHHHHHHHHHHHHHHHHhcCCc-
Confidence 444445557776 56 6777777766665543222 12335555553 455667777777777788777774432
Q ss_pred hHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHH-HHHHHHHHHHHHHhhccCChhH------
Q 008185 210 ALPNLMAC----VLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAA-ASGGILGNLFGGYFLLKTPPTT------ 278 (574)
Q Consensus 210 ~~~~l~~~----~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~-~~G~~igp~igg~l~~~~gwr~------ 278 (574)
+...+. -++.++..+........++.+..|++.|+++|+++.+.. .+|.++|..++|++.+.+|-+.
T Consensus 298 --~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~ 375 (400)
T PF03825_consen 298 --PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSA 375 (400)
T ss_pred --HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHH
Confidence 222222 234677777766677778888899999999999887754 5999999999999999877554
Q ss_pred HHHHHHHHHHHHHHH-hhhccccc
Q 008185 279 MFLVFAVLLSLQLAI-SFSAREES 301 (574)
Q Consensus 279 ~f~i~ai~~~~~~~~-~~~lpEt~ 301 (574)
.+.+.+.+.++..++ .++.||++
T Consensus 376 ~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 376 VFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCC
Confidence 344444444444433 24566653
No 222
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.19 E-value=3e-06 Score=86.41 Aligned_cols=116 Identities=15% Similarity=0.069 Sum_probs=84.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHH
Q 008185 369 NPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLA 448 (574)
Q Consensus 369 s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~ 448 (574)
+....|.+....+++-++..+.++.+.|++|||..+.+|++..++.+++ +.+. +.+..++..=+..++.
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll-~~~S----------~~F~afv~aR~l~Gi~ 134 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLL-WALS----------RNFAAFVLARFLGGIF 134 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHH-HHHH----------HHHHHHHHHHHhhhhc
Confidence 3445677777778888899999999999999999988887666554432 2221 1110111111122222
Q ss_pred HhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 008185 449 QFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLAS 495 (574)
Q Consensus 449 ~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~ 495 (574)
.....+..++++|+.+++.|+.+++..+....+|..+||.+||.+..
T Consensus 135 kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 135 KGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred cCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 34556677899999999999999999999999999999999999988
No 223
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.15 E-value=3.2e-05 Score=80.67 Aligned_cols=126 Identities=16% Similarity=0.096 Sum_probs=78.0
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC-----CchhHH-HHHHHHHHHHHhHHHHhhhhhhcccCcCcceEE
Q 008185 364 QCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKV-----PLRKLV-GAVQILYASSLLLDLILVRQINLQFGVPNEVFV 437 (574)
Q Consensus 364 ~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~-----~~r~ll-~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~ 437 (574)
+..|+|..+.|+..... +...+ .++.+.+.||+ |+||.+ ..+.++.+++.+.. .+... ....++.
T Consensus 16 ~~~g~s~~~~g~~~~~~-~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l-~~~~~------~~~l~~l 86 (356)
T TIGR00901 16 RSKNVSLKTIGFFSLVG-LPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLIL-SFLVP------STDLPLL 86 (356)
T ss_pred HHcCCCHHHHHHHHHHH-HHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHH-HcCCc------chhHHHH
Confidence 45799999999985442 22222 45666666665 787764 44444444332221 11110 0111111
Q ss_pred eehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Q 008185 438 LCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 438 l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g 498 (574)
.....+..........+..+++.|..|+++|+.+.|+.....++|..+++.+++.+.+..|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g 147 (356)
T TIGR00901 87 AGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEF 147 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 1111222222334445567788999999999999999999999999999999999888776
No 224
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.14 E-value=9.4e-05 Score=73.02 Aligned_cols=156 Identities=15% Similarity=0.112 Sum_probs=101.3
Q ss_pred HHHHHHhcCCChhHHHHHHHHhhhhhhhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCcc---chHHHH
Q 008185 138 NFHMAHNLSLHPSTLQLVQNSGNLPMVAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAA---KALPNL 214 (574)
Q Consensus 138 ~~~l~~~~~~s~~~~~l~~s~~~l~~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~---~~~~~l 214 (574)
.+.+++.+|.|.++...+.....++..++.+.|.+.|++ +-+..+.+|.+..++.+.......+.. ...+.+
T Consensus 25 S~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~-----gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~ 99 (250)
T PF06813_consen 25 SPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRF-----GPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLM 99 (250)
T ss_pred hHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhc-----chHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHH
Confidence 346788999999999999888888877899999999984 566677788888888877776654332 124555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHH-
Q 008185 215 MACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAI- 293 (574)
Q Consensus 215 ~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~- 293 (574)
.+..++++.|.+..+...-......+| ++||.+.++.-....+++.+-..+-..+.+. +-...+.+.++...++.++
T Consensus 100 ~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fll~la~~~~~v~l~~ 177 (250)
T PF06813_consen 100 CLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFLLFLAVLPAVVCLVA 177 (250)
T ss_pred HHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHHHHHH
Confidence 555666666666655544333445565 6899999987776666555444444333333 3333444445555444443
Q ss_pred hhhcccc
Q 008185 294 SFSAREE 300 (574)
Q Consensus 294 ~~~lpEt 300 (574)
.+++++.
T Consensus 178 ~~~vr~~ 184 (250)
T PF06813_consen 178 MFFVRPV 184 (250)
T ss_pred hhheecc
Confidence 4555543
No 225
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.13 E-value=6e-06 Score=88.66 Aligned_cols=149 Identities=15% Similarity=0.101 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHH
Q 008185 376 SRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPF 455 (574)
Q Consensus 376 ~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~ 455 (574)
......+|.++|.++.+.+++|+|||..+.++.++..+..++...... . +..-..+..-.+.+...++.....
T Consensus 65 ~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~-~------~~~e~li~GR~i~Gl~~gl~~~~~ 137 (485)
T KOG0569|consen 65 IVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKS-A------PSFEMLILGRLIVGLACGLSTGLV 137 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH-h------hhHHHHHHHHHHHHHHhHHHHHHH
Confidence 445567788888888899999999998887777666555443322111 0 001111111222221223333334
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHHHHHHhcCCCHHHH
Q 008185 456 SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLPLIWIHNVPMSETII 535 (574)
Q Consensus 456 ~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l~~~~~vp~~~~~~ 535 (574)
.++++|+.|.+.||..-.+......+|..++..++. -+.+|-. ......+.+..+.+++.++.+.++||..+.-
T Consensus 138 pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l--~~ilGt~----~~W~~l~~~~~i~~~~~l~~l~~~PESPk~L 211 (485)
T KOG0569|consen 138 PMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGL--PSLLGTE----DLWPYLLAFPLIPALLQLALLPFLPESPKYL 211 (485)
T ss_pred HHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHcc--HHhcCCC----cchHHHHHHHHHHHHHHHHHHhcCCCCcchH
Confidence 477899999999999888777777777776655542 2345522 2223445556666677777889999987755
Q ss_pred HH
Q 008185 536 EK 537 (574)
Q Consensus 536 ~~ 537 (574)
..
T Consensus 212 l~ 213 (485)
T KOG0569|consen 212 LI 213 (485)
T ss_pred HH
Confidence 43
No 226
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.12 E-value=0.00069 Score=72.36 Aligned_cols=303 Identities=13% Similarity=0.020 Sum_probs=148.4
Q ss_pred hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCc
Q 008185 166 KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGI 245 (574)
Q Consensus 166 ~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~r 245 (574)
..+.+++.|.+ +-|..+++++.. ..++.+..+..+ -+.+++.-.+.|+|.++-....+.++.+..+++..
T Consensus 67 ~l~~psiv~~i-----~~K~~lv~ga~~-y~~f~~gfl~~N----~y~~yfssallG~Gaallw~GqG~ylt~~st~~ti 136 (461)
T KOG3098|consen 67 CLFAPSIVNFL-----GPKWALVIGATC-YAAFPLGFLFPN----SYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETI 136 (461)
T ss_pred HHhhHHHHHHh-----hHHHHHHHHhHH-HHHHHHHHHhcc----hHHHHHHHHHhhhhHHheecccceehhhcCChhhH
Confidence 44556777864 456666666554 334443333333 13345666677888887777778888898888888
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhcc--------CChh-H----------HHHHHHHHHHHHHHH---hhhccccccc
Q 008185 246 VGLQSYAFMAAASGGILGNLFGGYFLLK--------TPPT-T----------MFLVFAVLLSLQLAI---SFSAREESLG 303 (574)
Q Consensus 246 g~~~s~~~~~~~~G~~igp~igg~l~~~--------~gwr-~----------~f~i~ai~~~~~~~~---~~~lpEt~~~ 303 (574)
.+..++.|+....+.++|.++-..+... .+-+ + +..+.+++.....+. ..+.|.+...
T Consensus 137 e~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~~~ 216 (461)
T KOG3098|consen 137 ERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKDVV 216 (461)
T ss_pred HHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccchh
Confidence 8888998888888888776665443321 1111 1 111111111111111 1123332211
Q ss_pred ccccchhcchhhhhhhhHHHHHHHHHHHHcchhhHHHHHHHHhHhhhcccccccce--eehccccCCCc-hhHHHHHHHH
Q 008185 304 LAQVSYQNVASKSIAQSIKKQFSDLIATIGEESISYPLTWLVASVAMVPVLSGSMF--CYQTQCLNINP-SVIGMSRVIG 380 (574)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~--~~~~~~~g~s~-~~~gl~~i~~ 380 (574)
... + .+ .+...+.++...+++++|+.+......+......-.+...+| +.++...+.+. ...++..+..
T Consensus 217 ~~~-~------~~-~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~ 288 (461)
T KOG3098|consen 217 NCK-S------SS-ETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGI 288 (461)
T ss_pred hhh-h------hc-cccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHH
Confidence 110 0 11 134556666666777888776655444332111111111121 12232344333 3345556777
Q ss_pred HHHHHHHHHHHHHHHh---cCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCc--------ceEEeehhHHHHHHHH
Q 008185 381 QSMLLSLTVFYDRYWK---KVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPN--------EVFVLCFAGLAETLAQ 449 (574)
Q Consensus 381 ~ig~lig~~l~~~l~~---r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~--------~~~~l~~~~l~~~~~~ 449 (574)
++|.++++.....+.| ++++++++.++.++..+..++ ..+.......+...+ .........+..+++.
T Consensus 289 g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~l-i~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D 367 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLL-IHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGD 367 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHH-HhccccccCCCCCCcccccccccchhHHHHHHHHHhhHH
Confidence 7888887776666554 466777766665554443332 112111100010000 1111111112222222
Q ss_pred -hhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHH
Q 008185 450 -FKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGF 488 (574)
Q Consensus 450 -~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~ 488 (574)
..-.-..+.++... ++.+..+++++-.-+.++.+++-+
T Consensus 368 ~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f 406 (461)
T KOG3098|consen 368 ACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFF 406 (461)
T ss_pred HHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhh
Confidence 11122234566666 567777777777766666655433
No 227
>PRK10133 L-fucose transporter; Provisional
Probab=98.10 E-value=2.8e-05 Score=83.88 Aligned_cols=125 Identities=11% Similarity=0.020 Sum_probs=87.6
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
.++.+|.++.+.|+......++..++....+++.+|+++|+++..+.+++++..++...... .++ +..+...
T Consensus 52 i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~-------a~~-~~~ll~~ 123 (438)
T PRK10133 52 FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE-------IMN-YTLFLVG 123 (438)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh-------cCC-HHHHHHH
Confidence 46789999999999999999999999999999999999999999888777766543211110 011 1112222
Q ss_pred HHHHHHH-HhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 008185 442 GLAETLA-QFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLA 494 (574)
Q Consensus 442 ~l~~~~~-~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~ 494 (574)
.+..+++ +........++.+..|++.++...++.+....+|..+++.+++.+.
T Consensus 124 r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 124 LFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223333 2333334556667666666666799999999999999999987665
No 228
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.08 E-value=9.2e-06 Score=83.37 Aligned_cols=158 Identities=15% Similarity=0.119 Sum_probs=104.1
Q ss_pred chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccch
Q 008185 132 FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKA 210 (574)
Q Consensus 132 ~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~ 210 (574)
+..+.++.++.|.+..+..+.|+..--..+++++ .+++|.++||+ +-.|......+.+....+....-+. + .
T Consensus 288 fLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~---~~~~wl~~~~gl~~~G~~~~~iP~~-~---~ 360 (464)
T KOG3764|consen 288 FLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY---PHLRWLLSLGGLATVGVSSGPIPFA-T---S 360 (464)
T ss_pred HhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc---CchhHHHHHHHHHHHHHHhchhHhh-h---h
Confidence 5666666688888886666888877667778888 78999999985 2234322222222222111111111 1 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHhhhccc---CccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHH
Q 008185 211 LPNLMACVLLSNLGASITEVAK---DALVAEYGQKN---GIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFA 284 (574)
Q Consensus 211 ~~~l~~~~~l~~~g~~~~~~~~---~a~i~d~~~~~---~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~a 284 (574)
+.++++-++..+++.+..|... -++..|.-..+ --|...++...+..+|..+||.+||.+.+..|.+|.-.+.+
T Consensus 361 ~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig 440 (464)
T KOG3764|consen 361 IAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIG 440 (464)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHH
Confidence 4555665555555655555433 34445543333 56788888899999999999999999999999999999988
Q ss_pred HHHHHHHHHhhh
Q 008185 285 VLLSLQLAISFS 296 (574)
Q Consensus 285 i~~~~~~~~~~~ 296 (574)
+..++-..+.+.
T Consensus 441 ~~n~iyapvl~l 452 (464)
T KOG3764|consen 441 ILNLIYAPVLLL 452 (464)
T ss_pred HHHHHHHHHHHH
Confidence 888776655433
No 229
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.06 E-value=8.5e-07 Score=92.60 Aligned_cols=125 Identities=13% Similarity=0.150 Sum_probs=94.1
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhH
Q 008185 363 TQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAG 442 (574)
Q Consensus 363 ~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~ 442 (574)
++.+|.++...|++.....+..++..++++++.+|++++.++.++..+..++.+..- +. +.++.+...=
T Consensus 60 ~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~-fs----------~~Fwq~~l~R 128 (493)
T KOG1330|consen 60 QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASG-FS----------NHFWQVLLCR 128 (493)
T ss_pred HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHH-HH----------HHHHHHHHHH
Confidence 345899999999998888899999999999999999999999988888776554321 11 1111111122
Q ss_pred HHHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Q 008185 443 LAETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 443 l~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g 498 (574)
.+.++|+....|. ..++++.+|.+.|++++++++.....|..+|-.++..+.+..+
T Consensus 129 ~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~ 185 (493)
T KOG1330|consen 129 GFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF 185 (493)
T ss_pred HHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc
Confidence 2334455555555 6789999999999999999999999999888888777766555
No 230
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.01 E-value=4.9e-05 Score=81.71 Aligned_cols=147 Identities=17% Similarity=0.096 Sum_probs=99.9
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhh-hhhhhheeeccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPM-VAKPLYGILSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~-~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
+.+.++...+.. +......++.++.+|.+ ...+....+..++. ...|++++++||+ +||+.+..+..+.+++
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-----gk~~~~~~~~~~~~~~ 303 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-----GKKKVYIIGLLLAALG 303 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-----cceeehhhhHHHHHHH
Confidence 444445444444 44445566777777766 45566666666654 4478999999996 4555666677777777
Q ss_pred HHHhhccc-CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-------cCccchHHHHHHHHHHHHHHHHHHHHH
Q 008185 198 WGPLALFP-VAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQK-------NGIVGLQSYAFMAAASGGILGNLFGGY 269 (574)
Q Consensus 198 ~~~~~~~~-~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~-------~~rg~~~s~~~~~~~~G~~igp~igg~ 269 (574)
..++.+.+ ++ .+.+++..++.+++.+.......++++|..+. ++.|..+|......-+|..+++.+.|.
T Consensus 304 ~~~~~~~~~~~---~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~ 380 (428)
T PF13347_consen 304 FLLLFFLGPGS---PWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGL 380 (428)
T ss_pred HHHHHHHHhhh---HHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 77776665 22 45556667777888777777777888888753 334777788888888999999999988
Q ss_pred hhccCC
Q 008185 270 FLLKTP 275 (574)
Q Consensus 270 l~~~~g 275 (574)
+.+..|
T Consensus 381 ~l~~~G 386 (428)
T PF13347_consen 381 LLALVG 386 (428)
T ss_pred HHHHhC
Confidence 876443
No 231
>PTZ00207 hypothetical protein; Provisional
Probab=97.99 E-value=0.00014 Score=80.59 Aligned_cols=125 Identities=12% Similarity=0.057 Sum_probs=75.3
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
..+.+|++..+.+.....+.... ......+++.+|+|+|+++.++.++..+..+........ . . .++.+ .++..
T Consensus 53 L~~~lgls~~~l~~i~svg~~~g-~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~-~--i-~~s~~-~l~l~ 126 (591)
T PTZ00207 53 MQARYNLTQRDLSTITTVGIAVG-YFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQE-V--I-EGSVV-RLSVY 126 (591)
T ss_pred HHHHhCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcc-c--c-cCcHH-HHHHH
Confidence 45679999999888754432222 234457899999999999999988877766543221110 0 0 01111 11111
Q ss_pred HHHHHHHH-hhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHH-HHHHHHHH
Q 008185 442 GLAETLAQ-FKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIA-SGFLGVGL 493 (574)
Q Consensus 442 ~l~~~~~~-~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~l-g~~i~g~l 493 (574)
.+..+.++ .........+.+.+| +.||.+.|+..+...+|.++ +++..+++
T Consensus 127 r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 127 NGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12222332 223334456778886 67899999999999999975 44444444
No 232
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.98 E-value=0.00013 Score=74.30 Aligned_cols=170 Identities=16% Similarity=0.137 Sum_probs=111.5
Q ss_pred chhHHHHHHHHHHHhhhccchhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHH
Q 008185 113 NKQMLVLCGLGYWVQGFRCFPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGV 191 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~ 191 (574)
-|.++..+.+..+..+.. +.|.+. ++.| -|+|+.+.|++.++..+.-.. +.+.-.+.+|. ..+|+..+...
T Consensus 210 aW~vtLfmGlqS~~~Y~~-~~WLP~--ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~----~n~r~~~~~~~ 281 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIV-IGWLPA--ILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRS----KNQRPLVVLAL 281 (395)
T ss_pred hHHHHHHHHhhHHHHHHH-HHHHHH--HHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHh----cccchHHHHHH
Confidence 566666555444433221 455553 4555 699999999988887664322 22222345542 25667776677
Q ss_pred HHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 192 FLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQK-NGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~-~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
..+.+.+..+++.+.+. .+...++.++|.+.+.+....++.+.+++ ++.++..++.+....+=..+||.+.|++
T Consensus 282 ~~~l~G~~G~~~~P~~~-----~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~l 356 (395)
T COG2807 282 LLMLVGLVGLLLAPGQL-----PILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFL 356 (395)
T ss_pred HHHHHHHHHHHHhhhhH-----HHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHH
Confidence 77777887777777542 12224666777666666677788888765 5667777777777777778899999999
Q ss_pred hccC-ChhHHHHHHHHHHHHHHHHhh
Q 008185 271 LLKT-PPTTMFLVFAVLLSLQLAISF 295 (574)
Q Consensus 271 ~~~~-gwr~~f~i~ai~~~~~~~~~~ 295 (574)
-+.. +|+...+..+...++..+.-+
T Consensus 357 hDa~gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 357 HDATGSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred HHhcCChHHHHHHHHHHHHHHHHHHh
Confidence 8754 699998888766666555433
No 233
>PRK09669 putative symporter YagG; Provisional
Probab=97.95 E-value=0.00012 Score=79.21 Aligned_cols=120 Identities=13% Similarity=0.046 Sum_probs=73.3
Q ss_pred hHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHH
Q 008185 150 STLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASIT 228 (574)
Q Consensus 150 ~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~ 228 (574)
...+.+.....++.++ .|++++++||+ +||..+.++....+++.....+.+.+ ....+++..++.+++.+..
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~-----gk~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~g~~~~~~ 336 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKF-----DRVRAFKWTIVAFVILSALIFFIPPS--NVWLIFALNILFNFIQNLT 336 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ChHHHHHHHHHHHHHHHHHHHHhCcc--hHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444 67889999985 34444444444433333222222221 1333455556677777777
Q ss_pred HHHHHHHHHhhhcc-------cCccchHHHHHHHHHHHHHHHHHHHHHhhccCCh
Q 008185 229 EVAKDALVAEYGQK-------NGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPP 276 (574)
Q Consensus 229 ~~~~~a~i~d~~~~-------~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gw 276 (574)
.+...++++|..+. +..|...+.......+|..+|+.++|++.+..|+
T Consensus 337 ~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 337 TPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77778889888752 2235556777777889999999999998876555
No 234
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.95 E-value=0.00082 Score=75.75 Aligned_cols=151 Identities=13% Similarity=0.080 Sum_probs=103.6
Q ss_pred HHHHhcCCChhHHHHHHHHhhh-hhhhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCcc----chHHHH
Q 008185 140 HMAHNLSLHPSTLQLVQNSGNL-PMVAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAA----KALPNL 214 (574)
Q Consensus 140 ~l~~~~~~s~~~~~l~~s~~~l-~~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~----~~~~~l 214 (574)
|+.+.+|.+.+.+..+...+.. .+.+..+.|.++|++ .+|+..+.++.++..+...+++..+... ......
T Consensus 13 Yl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~----lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 13 YFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGW----LGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 6667789988888777766644 445555789999985 5677777777777666666655532110 001113
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccc---CccchHHHHHHHHHHHHHHHHHHHHHhhcc-------CChhHHHHHHH
Q 008185 215 MACVLLSNLGASITEVAKDALVAEYGQKN---GIVGLQSYAFMAAASGGILGNLFGGYFLLK-------TPPTTMFLVFA 284 (574)
Q Consensus 215 ~~~~~l~~~g~~~~~~~~~a~i~d~~~~~---~rg~~~s~~~~~~~~G~~igp~igg~l~~~-------~gwr~~f~i~a 284 (574)
+++..+..+|.+..-+...+..+|..+++ +|-....+++.+.++|..+++++.+++.+. .+|...|.+.+
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~ 168 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPA 168 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHH
Confidence 34455556666666666678888887653 355667778888899999999999888643 36999999998
Q ss_pred HHHHHHHHHh
Q 008185 285 VLLSLQLAIS 294 (574)
Q Consensus 285 i~~~~~~~~~ 294 (574)
+..++.+++.
T Consensus 169 i~m~ia~lvf 178 (654)
T TIGR00926 169 ILMILALIVF 178 (654)
T ss_pred HHHHHHHHHH
Confidence 8877766653
No 235
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.86 E-value=0.00067 Score=67.12 Aligned_cols=142 Identities=28% Similarity=0.213 Sum_probs=96.0
Q ss_pred HHhcCCCh--hHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHH
Q 008185 142 AHNLSLHP--STLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACV 218 (574)
Q Consensus 142 ~~~~~~s~--~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 218 (574)
..+++.+. ...++..+.+.++..+ .+++|.++|+. +||+.+..+.....+.....++... .....+++.|
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 101 (338)
T COG0477 29 LSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-----GRRKVLIIGLLLFLLGTLLLALAPN--VGLALLLILR 101 (338)
T ss_pred HHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-----cchHHHHHHHHHHHHHHHHHHhCcc--chHHHHHHHH
Confidence 33455555 4778888888887766 57899999985 3444444444332333333333333 2256677788
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc-cCccchHHHHHH-HHHHHHHHHHHHHHHhhcc--CChhHHHHHHHHHHHHH
Q 008185 219 LLSNLGASITEVAKDALVAEYGQK-NGIVGLQSYAFM-AAASGGILGNLFGGYFLLK--TPPTTMFLVFAVLLSLQ 290 (574)
Q Consensus 219 ~l~~~g~~~~~~~~~a~i~d~~~~-~~rg~~~s~~~~-~~~~G~~igp~igg~l~~~--~gwr~~f~i~ai~~~~~ 290 (574)
+..+++.+...+...+++.|..++ ++|+...+.... ...+|.+++|.+++.+... .+||+.|++........
T Consensus 102 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 102 LLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL 177 (338)
T ss_pred HHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 887788777777788899999886 567877777777 4678889999888877653 68999777766555433
No 236
>PRK11462 putative transporter; Provisional
Probab=97.74 E-value=0.00011 Score=79.72 Aligned_cols=135 Identities=12% Similarity=0.069 Sum_probs=88.7
Q ss_pred eeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc----CCchhHHH-HHHHHHHHHHhHHHHhhhhhhcccCcCc
Q 008185 359 FCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKK----VPLRKLVG-AVQILYASSLLLDLILVRQINLQFGVPN 433 (574)
Q Consensus 359 ~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r----~~~r~ll~-~~~ll~~~~~l~~l~l~~~~~~~~~~~~ 433 (574)
.+|+++++|+++...|.+.+..-+.-.+.-++.+++.|| +|+||..+ ++.+..++...+ ++... .++...
T Consensus 33 ~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~l-lf~~p----~~s~~~ 107 (460)
T PRK11462 33 MFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVL-AYSTP----DLSMNG 107 (460)
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHH-HHhCC----CCCcch
Confidence 457789999999999999888877777777777777664 67776654 444444444322 11111 111111
Q ss_pred -ceEEeehhHHHHHHHHhhHHHHHHHHHhhcC-CChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Q 008185 434 -EVFVLCFAGLAETLAQFKLLPFSMLLARLCP-QGCEGSLTSFSASALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 434 -~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p-~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g 498 (574)
..+..+...++........+|..++..|+.+ +++|++..+......++|..+++.+...+...+|
T Consensus 108 ~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g 174 (460)
T PRK11462 108 KMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIG 174 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 1122222333334445666788889999887 6889999999998888988888888777666665
No 237
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.73 E-value=0.00022 Score=73.81 Aligned_cols=141 Identities=10% Similarity=-0.018 Sum_probs=96.2
Q ss_pred hhhcccccccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhc
Q 008185 348 VAMVPVLSGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINL 427 (574)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~ 427 (574)
|+......+.+.-.+++.++.+..+.++.......|-.++....+++.||++.|+-++.+..++++...+..-...
T Consensus 25 ~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~---- 100 (422)
T COG0738 25 WGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAAS---- 100 (422)
T ss_pred HHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhh----
Confidence 5555556666655677889999999999988888888888888899999999999998888887766543211110
Q ss_pred ccCcCcceEEeehhHHHHHHH-HhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Q 008185 428 QFGVPNEVFVLCFAGLAETLA-QFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASL 496 (574)
Q Consensus 428 ~~~~~~~~~~l~~~~l~~~~~-~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~ 496 (574)
...+-..+..++..+.| +..=.....++..+-+++....-..+...+..+|..++|.+++.+...
T Consensus 101 ----~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils 166 (422)
T COG0738 101 ----SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILS 166 (422)
T ss_pred ----hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 01111111111111111 111111234567777888888889999999999999999999988773
No 238
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.72 E-value=9.7e-05 Score=80.54 Aligned_cols=135 Identities=13% Similarity=0.067 Sum_probs=83.4
Q ss_pred eeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh----cCCchhHH-HHHHHHHHHHHhHHHHhhhhhhcccCcC-
Q 008185 359 FCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWK----KVPLRKLV-GAVQILYASSLLLDLILVRQINLQFGVP- 432 (574)
Q Consensus 359 ~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~----r~~~r~ll-~~~~ll~~~~~l~~l~l~~~~~~~~~~~- 432 (574)
++|+++++|+++...|.+....-+...+.-++.+.+.| |+|+||.. .++.+..++...+. +.. . ..+..
T Consensus 30 ~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ll--f~~-p--~~~~~~ 104 (473)
T PRK10429 30 MYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLL--FSA-H--LFEGTA 104 (473)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHH--HcC-C--CCCccH
Confidence 45678899999999999988888888888888888888 56885554 44555444432221 111 0 01000
Q ss_pred cceEEeehhHHHHHHHHhhHHHHHHHHHhhc-CCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Q 008185 433 NEVFVLCFAGLAETLAQFKLLPFSMLLARLC-PQGCEGSLTSFSASALCLSSIASGFLGVGLASLTG 498 (574)
Q Consensus 433 ~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~-p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g 498 (574)
..++.+....+......+..+|..++..|+. ++++|.+.++.-....++|..+.+.+...+...+|
T Consensus 105 ~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g 171 (473)
T PRK10429 105 QYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVG 171 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 0111222222333333455678888889998 57888988888677777776666665555545455
No 239
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.71 E-value=0.00063 Score=70.90 Aligned_cols=172 Identities=16% Similarity=0.161 Sum_probs=107.9
Q ss_pred HHHHHHHHHhhhccchhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHH-H
Q 008185 118 VLCGLGYWVQGFRCFPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQ-I 195 (574)
Q Consensus 118 ~~~~~~~f~~~~~~~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~-~ 195 (574)
++++-..+..|...+...+.. +-+.++|++..+..++.-...+..+. ..++|.|.||+ | -|+.+.++.++. +
T Consensus 257 FLiA~~~~~DGv~til~~~~~-fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf---g--~k~vl~~~lvi~~~ 330 (438)
T COG2270 257 FLIARFFYIDGVNTILAMGGV-FGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF---G--SKPVLMIGLVILSI 330 (438)
T ss_pred HHHHHHHHHhhHHHHHHHHHH-HHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---C--CceeehHHHHHHHH
Confidence 334444456666654444433 55667999999988776655554443 66789999986 4 334444444433 3
Q ss_pred HHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008185 196 LSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTP 275 (574)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~g 275 (574)
++..++..-. . .. +.++-++.+...+.......++.+++.|+++-+..+|+++...-.+..+||.+-+.+.+..|
T Consensus 331 ~~~~~~~~~~--~--~~-f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg 405 (438)
T COG2270 331 AALYLIFLEG--E--LD-FWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITG 405 (438)
T ss_pred HHHHHHHccc--c--HH-HHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhc
Confidence 3333222222 1 11 12332333333444444567889999999999999999999999999999999999887543
Q ss_pred -hhHHHHHHHHHHHHHHHHhhhcccc
Q 008185 276 -PTTMFLVFAVLLSLQLAISFSAREE 300 (574)
Q Consensus 276 -wr~~f~i~ai~~~~~~~~~~~lpEt 300 (574)
-|.-+....++.++.+++.+++|+.
T Consensus 406 ~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 406 SSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred chhhHHHHHHHHHHhhHhhEEeecCC
Confidence 6666666555555555555667764
No 240
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.70 E-value=0.00069 Score=71.56 Aligned_cols=156 Identities=12% Similarity=0.022 Sum_probs=105.4
Q ss_pred hHHHHHHhcC---CChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHH
Q 008185 137 LNFHMAHNLS---LHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALP 212 (574)
Q Consensus 137 ~~~~l~~~~~---~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~ 212 (574)
.+-|.+..++ .+....|.+.++..+.=+. -.+..++.+|+ +-|..++++..+.++=+.+.++.++ .+
T Consensus 243 f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-----g~k~~Lllag~i~~iRi~~~~~~~~----~~ 313 (412)
T PF01306_consen 243 FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-----GAKNLLLLAGVIMAIRIIGSGFATN----PW 313 (412)
T ss_dssp HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHT--S----HH
T ss_pred HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-----ChHhHHHHHHHHHHHHHHHHhhhcc----hH
Confidence 3445555333 2334566666665543221 11234566765 4556677777888888888777754 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHH-HHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHH
Q 008185 213 NLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYA-FMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQL 291 (574)
Q Consensus 213 ~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~-~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~ 291 (574)
.+.+...+.++-..+.-+..--++.+..+++..++++.+. +.+..+|.++.+.++|.+.++.|.+.+|++++.+.+...
T Consensus 314 ~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~ 393 (412)
T PF01306_consen 314 VISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFT 393 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHH
Confidence 5677888988888888777778889998877766666654 466679999999999999999999999999998877777
Q ss_pred HHh-hhccccc
Q 008185 292 AIS-FSAREES 301 (574)
Q Consensus 292 ~~~-~~lpEt~ 301 (574)
++. +.++.++
T Consensus 394 li~~f~l~~~~ 404 (412)
T PF01306_consen 394 LISAFTLKKDK 404 (412)
T ss_dssp HHHHHHS--SS
T ss_pred HHheeeecCCC
Confidence 765 5566544
No 241
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.64 E-value=0.00032 Score=76.30 Aligned_cols=158 Identities=15% Similarity=0.085 Sum_probs=99.1
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhH
Q 008185 363 TQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAG 442 (574)
Q Consensus 363 ~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~ 442 (574)
.++.+....+++.......++-+++.+..+.+.+|++..+.+....++..+..++..... +.+. +...-
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~----------s~~~-~ialr 141 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVH----------SFPG-LIALR 141 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHh----------hhHH-HHHHH
Confidence 355677777888887778888888888888899999977776666555554443322211 1111 11112
Q ss_pred HHHHHHHhhHHH-HHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHH-HHH
Q 008185 443 LAETLAQFKLLP-FSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLA-ALL 520 (574)
Q Consensus 443 l~~~~~~~~~~p-~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~-~ll 520 (574)
+..++.+....| ...++...+.++++|.-+|++....++|+++|+++...+.+.-|.. ..+. ...++++.+++ ...
T Consensus 142 ~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~-~~~g-W~~~FiI~G~i~~~~ 219 (495)
T KOG2533|consen 142 FLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG-GLAG-WRWLFIIEGVITLVL 219 (495)
T ss_pred HHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC-CcCC-ceeehhHHHHHHHHH
Confidence 222333433444 4566888999999999999999999999999999888776532221 1112 22334444444 444
Q ss_pred HHHHHHhcCCCHH
Q 008185 521 PLIWIHNVPMSET 533 (574)
Q Consensus 521 ~l~~~~~vp~~~~ 533 (574)
+++.++++|+...
T Consensus 220 gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 220 GIVVFFFLPDNPS 232 (495)
T ss_pred HheEEEEecCChh
Confidence 5555677886655
No 242
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.54 E-value=0.0016 Score=67.86 Aligned_cols=156 Identities=17% Similarity=0.069 Sum_probs=111.4
Q ss_pred hhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhhhh-hheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchH
Q 008185 133 PWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVAKP-LYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKAL 211 (574)
Q Consensus 133 ~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~p-l~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~ 211 (574)
-..-+++|=.+.||++..+.+.+.+....+..++. +.|.+..+ +.+++....+++..+++++.+..++.... ..
T Consensus 227 QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~----~~~~~~~a~~G~~~~~~~f~lii~a~~~~-~~ 301 (403)
T PF03209_consen 227 QDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSR----RLGKKRTAALGCLLGALAFALIILAGPLG-SP 301 (403)
T ss_pred hHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCchHHHHHHHHHHHHHHHHHHHHHhcc-cc
Confidence 44456667788899999999988888877766655 35666553 23444555567777777776655543221 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhcc----------CChhHHHH
Q 008185 212 PNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLK----------TPPTTMFL 281 (574)
Q Consensus 212 ~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~----------~gwr~~f~ 281 (574)
+.+-...++.++|.++..+..-+.+-|+..+++.|..++.+.+...+..-+|-++||.+.+. .++..+|.
T Consensus 302 ~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~ 381 (403)
T PF03209_consen 302 WLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFA 381 (403)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHH
Confidence 44556677788999988888888899999888899999999999999888999999877641 34666777
Q ss_pred HHHHHHHHHHHH
Q 008185 282 VFAVLLSLQLAI 293 (574)
Q Consensus 282 i~ai~~~~~~~~ 293 (574)
+-++..++..++
T Consensus 382 lEa~ll~~a~~l 393 (403)
T PF03209_consen 382 LEAVLLLAALVL 393 (403)
T ss_pred HHHHHHHHHHHH
Confidence 766555544443
No 243
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.50 E-value=0.00091 Score=73.81 Aligned_cols=121 Identities=10% Similarity=0.055 Sum_probs=82.7
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHH
Q 008185 364 QCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGL 443 (574)
Q Consensus 364 ~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l 443 (574)
+.++.+.....+......+|.++|..+.+.+.+|+|||+++.++.++.+++.+.. .+. ++.......-.+
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~-a~a---------~~~~~~~~~Rfl 180 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILT-AFA---------PNYWMFLIFRFL 180 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHH-HHh---------CcHHHHHHHHHH
Confidence 4466667777788888899999999999999999999999999988877766432 221 121111111112
Q ss_pred HHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 008185 444 AETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLAS 495 (574)
Q Consensus 444 ~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~ 495 (574)
.++..........++++|+.+++.|+.+..+ ......+..+++..++.+..
T Consensus 181 ~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255|consen 181 SGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred HHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 2222222233335678899999999999999 66677777777777777666
No 244
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.49 E-value=0.0003 Score=75.10 Aligned_cols=165 Identities=13% Similarity=0.089 Sum_probs=118.1
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
+++..++.|... ++...+-.+++| .+-.+...|....+-..+-++ -++.+.+.+++ ++..++.++....++=
T Consensus 376 ff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-----GHv~v~~lgLa~~~~R 449 (618)
T KOG3762|consen 376 FFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-----GHVNVMYLGLACNVGR 449 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHh-----cccceeeehhhHHHHH
Confidence 334444555544 555656556665 676666667544444444333 45667888874 4555555566666666
Q ss_pred HHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHH-HHHHHHHHHHHHHhhccCCh
Q 008185 198 WGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAA-ASGGILGNLFGGYFLLKTPP 276 (574)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~-~~G~~igp~igg~l~~~~gw 276 (574)
++......+ .|+.+-.-+++++..+.......+++.+..||+.|..++++..... .+|--+|.++||.+.+.+|=
T Consensus 450 f~~~S~L~n----~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~ 525 (618)
T KOG3762|consen 450 FLYYSYLQN----PWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGA 525 (618)
T ss_pred HHHHHHhcC----chheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehh
Confidence 666666643 4555667788888888888888899999999999999999887765 48999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHh
Q 008185 277 TTMFLVFAVLLSLQLAIS 294 (574)
Q Consensus 277 r~~f~i~ai~~~~~~~~~ 294 (574)
|..|++.++..++.++..
T Consensus 526 ~ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 526 RTTFRIFGIACLVTLALF 543 (618)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999988887776653
No 245
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.44 E-value=0.15 Score=54.51 Aligned_cols=149 Identities=13% Similarity=0.142 Sum_probs=82.6
Q ss_pred chhHHHHHHHHHHHhhhcc-chhhhhHHHHHHhcCC---ChhHHHHHHHHhhhhhh--hhhhheeeccccccCCCccch-
Q 008185 113 NKQMLVLCGLGYWVQGFRC-FPWLALNFHMAHNLSL---HPSTLQLVQNSGNLPMV--AKPLYGILSDALYIGGAHRIP- 185 (574)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~---s~~~~~l~~s~~~l~~~--~~pl~G~lsD~~~~~G~rRk~- 185 (574)
.|.-+..+++..++.++.+ +. --++|.+.+ +++.+.++-....+|.. +.++.+.++++. . +++.
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~l-----R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l---t-~~~vF 95 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLL-----RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL---T-REKVF 95 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc---C-HHHHH
Confidence 3444444555555555543 21 134665544 56778888888888753 377889999975 1 3332
Q ss_pred hHhHHHHHHHHHHHHhhcc--cC------c-----------c-c--------hHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 008185 186 YICIGVFLQILSWGPLALF--PV------A-----------A-K--------ALPNLMACVLLS-NLGASITEVAKDALV 236 (574)
Q Consensus 186 ~l~i~~~~~~~~~~~~~~~--~~------~-----------~-~--------~~~~l~~~~~l~-~~g~~~~~~~~~a~i 236 (574)
+++.+.+ ..++.+++++ +. + + . +-|...+...++ ..|.-.....-.+..
T Consensus 96 ~~~~~~F--~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~fa 173 (509)
T COG3202 96 YIILGFF--LGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFA 173 (509)
T ss_pred HHHHHHH--HHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333322 2222222221 10 0 0 0 002222223332 233333333445677
Q ss_pred HhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhc
Q 008185 237 AEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLL 272 (574)
Q Consensus 237 ~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~ 272 (574)
.|+++.+|..+..++++.+.+++..++..+..++..
T Consensus 174 Neitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 174 NEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 888888888999999999999888888888877765
No 246
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.37 E-value=0.0018 Score=71.43 Aligned_cols=105 Identities=10% Similarity=0.047 Sum_probs=73.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhh
Q 008185 372 VIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFK 451 (574)
Q Consensus 372 ~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 451 (574)
+.+++.....+|+.++..+.+++.|++|+|+.++++.+++.+..++.... . +....+..-.+.+...+..
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a-~---------~~~~l~~GR~l~G~g~G~~ 159 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA-P---------SWYQLIVGRILTGLGVGGA 159 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-h---------hHHHHHHHHHHhccchhhh
Confidence 45788888889999999999999999999999998888777665543211 1 1111111122222222233
Q ss_pred HHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHH
Q 008185 452 LLPFSMLLARLCPQGCEGSLTSFSASALCLSSIAS 486 (574)
Q Consensus 452 ~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg 486 (574)
......+.+|++|++.||...++.+....+|..++
T Consensus 160 ~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~ 194 (513)
T KOG0254|consen 160 SVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG 194 (513)
T ss_pred hhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH
Confidence 34445789999999999999999888888777777
No 247
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.37 E-value=0.00044 Score=72.53 Aligned_cols=129 Identities=14% Similarity=0.070 Sum_probs=93.0
Q ss_pred hheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccch----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 008185 168 LYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKA----LPNLMACVLLSNLGASITEVAKDALVAEYGQKN 243 (574)
Q Consensus 168 l~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~ 243 (574)
+...++|++ +||+..+-+.+++.+.+++++...+.... .....+..+++++|-.... ....+|.+|.+
T Consensus 367 ~tv~~id~i-----GRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~tt---fivpaE~FPar 438 (538)
T KOG0252|consen 367 FTVYFIDII-----GRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATT---FIVPAEIFPAR 438 (538)
T ss_pred EEEEEeehh-----hhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCcee---EEeehhhchHH
Confidence 457899974 68888887888888888777776541111 1112233445555533222 22247888889
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHhhc-----cCChhHHHHHHHHHHHHHHHHhhhcccccccc
Q 008185 244 GIVGLQSYAFMAAASGGILGNLFGGYFLL-----KTPPTTMFLVFAVLLSLQLAISFSAREESLGL 304 (574)
Q Consensus 244 ~rg~~~s~~~~~~~~G~~igp~igg~l~~-----~~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~ 304 (574)
-|+..-++..+..-+|+++|...-+++.+ ..|.|++|++.+....+..+..+++|||....
T Consensus 439 vR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~ 504 (538)
T KOG0252|consen 439 VRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKS 504 (538)
T ss_pred HhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccC
Confidence 99999898777777999999998888888 78999999999988887777778899987543
No 248
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.34 E-value=0.055 Score=58.90 Aligned_cols=42 Identities=14% Similarity=0.045 Sum_probs=34.1
Q ss_pred HHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhc
Q 008185 231 AKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLL 272 (574)
Q Consensus 231 ~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~ 272 (574)
.-.++..|.++.+|..+..++...+.++|.+++..+..++.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346677888888888888999988888888888888877766
No 249
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.34 E-value=0.0013 Score=71.74 Aligned_cols=129 Identities=12% Similarity=0.018 Sum_probs=88.8
Q ss_pred HHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccC--c----cchHHHH
Q 008185 142 AHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPV--A----AKALPNL 214 (574)
Q Consensus 142 ~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~--~----~~~~~~l 214 (574)
.+.+|.++.+.|++.+...++..+ ..+.+.+.+|+ +.|..+.++.++.+++......... + ......+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-----~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~ 354 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-----PYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFV 354 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-----CHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeee
Confidence 346899999999988887766554 55667776653 3455566666665555433221110 0 0001112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008185 215 MACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTP 275 (574)
Q Consensus 215 ~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~g 275 (574)
+..-++.+++.++...+...++.+..|++++|..+++.....++|..+|+.+||++.+..|
T Consensus 355 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 355 LGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred eehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3334556667777777778889999999999999999999999999999999999988766
No 250
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.33 E-value=0.017 Score=56.73 Aligned_cols=307 Identities=15% Similarity=0.109 Sum_probs=145.6
Q ss_pred hcCCChhHHHHHHHHhhh-hhhhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHH
Q 008185 144 NLSLHPSTLQLVQNSGNL-PMVAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSN 222 (574)
Q Consensus 144 ~~~~s~~~~~l~~s~~~l-~~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~ 222 (574)
.++....+++-+.-.... .+.++-+.|-+.|+. +||.--+..+ +...+.+..-+++ .+..+++.|.+++
T Consensus 66 tYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-----GRKracvtyc----itYiLsCiTKhSp-qYkVLmVGR~LGG 135 (454)
T KOG4332|consen 66 TYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-----GRKRACVTYC----ITYILSCITKHSP-QYKVLMVGRVLGG 135 (454)
T ss_pred hcCccCCccceeeecccchHHHHHHHHHHHHhhh-----ccccceeeeh----HHHHHHHHhhcCC-ceEEEeehhhhhh
Confidence 356666666643322222 235578889999974 3443222222 2333333333332 2455789999998
Q ss_pred HHHHHHHHHHHHH-HHhhhcccCccchHHHHH--------HHHHHHHHHHHHHHHHhhcc--CChhHHHHHHHHHHHHHH
Q 008185 223 LGASITEVAKDAL-VAEYGQKNGIVGLQSYAF--------MAAASGGILGNLFGGYFLLK--TPPTTMFLVFAVLLSLQL 291 (574)
Q Consensus 223 ~g~~~~~~~~~a~-i~d~~~~~~rg~~~s~~~--------~~~~~G~~igp~igg~l~~~--~gwr~~f~i~ai~~~~~~ 291 (574)
+..+....+..+. ++|-- ++|+.-+-+.. .+..+-.+++.+.|..+++. +|.-..|-..+.+..+..
T Consensus 136 iaTsLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigm 213 (454)
T KOG4332|consen 136 IATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGM 213 (454)
T ss_pred HHHHHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHH
Confidence 8887765444433 34432 33443332111 12224445555555555553 466677765544444444
Q ss_pred HHhh-hcccccccccccchhcchhhhhhhhHHHHHHH-HHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCC
Q 008185 292 AISF-SAREESLGLAQVSYQNVASKSIAQSIKKQFSD-LIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNIN 369 (574)
Q Consensus 292 ~~~~-~lpEt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s 369 (574)
.+.+ -..|.+..+.+ .+....+.+. ...+..|.++.+.-.+..+.-..++ .+.+..+-.+.-+
T Consensus 214 Avil~~W~ENygdps~-----------~kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smy----tFVFLWTPaLspn 278 (454)
T KOG4332|consen 214 AVILSSWSENYGDPSE-----------NKDLLTQFKGAARAIASDEKIALLGAIQSLFEGSMY----TFVFLWTPALSPN 278 (454)
T ss_pred HHHHhhhhhccCChhh-----------hHHHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhh----eeeeeecccCCCC
Confidence 3333 34555543221 1111222221 2223456665544433333111111 1111112222211
Q ss_pred ch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHH
Q 008185 370 PS--VIGMSRVIGQSMLLSLTVFYDRYWKKVPLR--KLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAE 445 (574)
Q Consensus 370 ~~--~~gl~~i~~~ig~lig~~l~~~l~~r~~~r--~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~ 445 (574)
+. -.|.++.-..+++++|.-++.|+..|...+ ....+..++..+..++.. +.......-+.+. ..+...++++
T Consensus 279 ~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpi-lt~~vsP~kes~~--~s~i~F~~~E 355 (454)
T KOG4332|consen 279 DEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPI-LTSSVSPSKESPS--ESLIGFCLFE 355 (454)
T ss_pred cccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHH-HHhccCCCcCCch--HHHHHHHHHH
Confidence 22 247778888889999999998888765443 233333333333322222 1111111111111 1123334444
Q ss_pred HHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHH
Q 008185 446 TLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALC 480 (574)
Q Consensus 446 ~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~ 480 (574)
.+.+..+..++-+-.+..|++.|++.+-++..-.+
T Consensus 356 ~cvGlfwPSimkmRsqyIPEearstimNfFRvPLn 390 (454)
T KOG4332|consen 356 ACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLN 390 (454)
T ss_pred HHHhhcchHHHHHHHhhCCHHHHhhhhhheechhh
Confidence 44444444445566788999999887766554333
No 251
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.26 E-value=0.002 Score=69.02 Aligned_cols=136 Identities=14% Similarity=0.105 Sum_probs=89.3
Q ss_pred chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccch
Q 008185 132 FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKA 210 (574)
Q Consensus 132 ~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~ 210 (574)
+......+|.+..+|-+..+..+.......+..+ .+++.++++++ ++|..+.++.++.+++..++.+.+.+ +
T Consensus 254 i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-----gkk~~~~~~~~~~~i~~~~~~f~~~~--~ 326 (467)
T COG2211 254 IRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-----GKKKLFLIGLLLLAVGYLLLYFTPAG--S 326 (467)
T ss_pred HHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-----chHHHHHHHHHHHHHHHHHHHhhcCc--c
Confidence 3444444555555666666665555555555555 56788899985 45555666777777777777777633 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-------cCccchHHHHHHHHHHHHHHHHHHHHHhhccC
Q 008185 211 LPNLMACVLLSNLGASITEVAKDALVAEYGQK-------NGIVGLQSYAFMAAASGGILGNLFGGYFLLKT 274 (574)
Q Consensus 211 ~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~-------~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~ 274 (574)
...++++.++.++|.+.......++++|..+- +.-|...+......=+|..+|..+.|++....
T Consensus 327 ~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 327 VVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred hHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 44556667888899998888888888887642 22255555555555588888888888776543
No 252
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.19 E-value=6e-06 Score=89.14 Aligned_cols=150 Identities=11% Similarity=0.041 Sum_probs=88.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHH-H
Q 008185 371 SVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLA-Q 449 (574)
Q Consensus 371 ~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~-~ 449 (574)
...++......+|.++|..+.+.+.||+|||+.+.++.++..+..++.. +.... .+.+.....-.+ .+++ +
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~-~~~~~------~~~~~~~~~R~~-~G~~~g 117 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIA-FAPSY------NNFWMLLIGRFL-IGFGIG 117 (451)
T ss_pred HHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc-ccccc------cccccccccccc-cccccc
Confidence 4567778888899999999999999999999998888776655443221 11100 011111111111 2222 2
Q ss_pred hhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHHHHHHhcC
Q 008185 450 FKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLPLIWIHNVP 529 (574)
Q Consensus 450 ~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l~~~~~vp 529 (574)
.......+++.|.+|++.||...++.+....+|..++..++-.+....+ .........+.++..++.++...++|
T Consensus 118 ~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-----~~~Wr~~~~~~~~~~l~~~~~~~~~p 192 (451)
T PF00083_consen 118 GAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSD-----NWGWRILLIFGAIPSLLVLLLRFFLP 192 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccccccccccccccccccccc
Confidence 3333445778999999999999888888777777766655433311111 00112223344444444444557788
Q ss_pred CCHH
Q 008185 530 MSET 533 (574)
Q Consensus 530 ~~~~ 533 (574)
|...
T Consensus 193 ESP~ 196 (451)
T PF00083_consen 193 ESPR 196 (451)
T ss_pred cccc
Confidence 7744
No 253
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.94 E-value=0.0053 Score=60.69 Aligned_cols=121 Identities=12% Similarity=0.048 Sum_probs=76.7
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcC-cceEEeeh
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVP-NEVFVLCF 440 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~-~~~~~l~~ 440 (574)
.++.+|+|..+...+.....+|..+| +..+.+.|+++.+..+.++.+...+.+........+. ++ ...+.++.
T Consensus 28 Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~-----i~~~~~~~~~~ 101 (250)
T PF06813_consen 28 LKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGR-----IPSLPVWLMCL 101 (250)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCc-----cCccchHHHHH
Confidence 35679999999999988888888775 6678889999999888888887777766543332211 11 11111221
Q ss_pred hHHHHHHHH-hhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHH
Q 008185 441 AGLAETLAQ-FKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFL 489 (574)
Q Consensus 441 ~~l~~~~~~-~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i 489 (574)
.....+.+. ...........+.+| +.||++.|+.-+...+++++-..+
T Consensus 102 ~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i 150 (250)
T PF06813_consen 102 FLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQI 150 (250)
T ss_pred HHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHH
Confidence 111111111 111222334557787 479999999998888887654443
No 254
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=96.92 E-value=0.012 Score=59.81 Aligned_cols=165 Identities=13% Similarity=0.132 Sum_probs=87.7
Q ss_pred eccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHH
Q 008185 172 LSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSY 251 (574)
Q Consensus 172 lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~ 251 (574)
+.|.. |-||.+++-.+..+.+|.++-+..+ .+.+=+.=+.-|. .+.++++..+++-...+|+++.++.+.
T Consensus 65 LTD~l-----rYKPvivlq~ls~v~~w~~lv~g~s----V~~mQvlE~FyG~-~tAaEIAYysYIYs~Vd~~~Yqrvt~y 134 (433)
T KOG3810|consen 65 LTDYL-----RYKPVVVLQALSGVPVWIMLVFGPS----VKAMQVLEFFYGP-ATAAEIAYYSYIYSKVDPEMYKRVTGY 134 (433)
T ss_pred Hhhhh-----hcceeeeeeccchhHHHHHHHhcCC----chheeeehhhcCh-HHHHHHhhhheeeeecCHHHHHHHHHH
Confidence 67853 7788887766666667766555432 1222222222222 234566777777777788888788887
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc--CChhHHHHHHHHHHHHHHHHhhhcccccccccc---cch---hcchh----hhhh-
Q 008185 252 AFMAAASGGILGNLFGGYFLLK--TPPTTMFLVFAVLLSLQLAISFSAREESLGLAQ---VSY---QNVAS----KSIA- 318 (574)
Q Consensus 252 ~~~~~~~G~~igp~igg~l~~~--~gwr~~f~i~ai~~~~~~~~~~~lpEt~~~~~~---~~~---~~~~~----~~~~- 318 (574)
..++...|-..|..++-.++.. .+....=.+......+..++.+++|..++..-. .++ ++++. .+..
T Consensus 135 ~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~~~e~~~~~~~~~~ 214 (433)
T KOG3810|consen 135 CRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKISVGDLEEMNPQASYMS 214 (433)
T ss_pred hHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccceeccchhcCccchhhH
Confidence 7777777888887777766642 233333333322222333335566654422110 000 11110 0000
Q ss_pred ---hhHHHHHHHHHHHHcchhhHHHHHHHHh
Q 008185 319 ---QSIKKQFSDLIATIGEESISYPLTWLVA 346 (574)
Q Consensus 319 ---~~~~~~~~~~~~~~~~~~v~~~~l~~~l 346 (574)
....+-.+++....++|.++.-.++-.+
T Consensus 215 ~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl 245 (433)
T KOG3810|consen 215 YLRGAFVLLWRDLQECYSNPRLLKWSLWWAL 245 (433)
T ss_pred HHHHHHHHHHHHHHHHhcCchhhhhHHHHHH
Confidence 1122223455566788888777776655
No 255
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.84 E-value=0.036 Score=57.14 Aligned_cols=125 Identities=19% Similarity=0.162 Sum_probs=75.3
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhH
Q 008185 363 TQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAG 442 (574)
Q Consensus 363 ~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~ 442 (574)
-+.+|+++.+++.+++.+.+.+++.+.+.+.+.||+|+|+.-+..++++.++++.. . .++ +.++..+=
T Consensus 61 Y~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k----~-------~~~-~~~L~~GR 128 (354)
T PF05631_consen 61 YESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK----H-------SSN-YPVLLLGR 128 (354)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH----h-------ccc-cHHHHHHH
Confidence 35699999999999999999999999999999999999988777777776665421 0 122 22222222
Q ss_pred HHHHHHH-hhHHHH-HHHHHhh----cCCChhHHHHHHHHHHHH-hHHHHHHHHHHHHHHhhCc
Q 008185 443 LAETLAQ-FKLLPF-SMLLARL----CPQGCEGSLTSFSASALC-LSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 443 l~~~~~~-~~~~p~-~~l~~~~----~p~~~~gt~~gl~~~~~~-lg~~lg~~i~g~l~~~~g~ 499 (574)
+..+++. +.+... .-++.|. .|++..+..++......| +-.+++..++-.+.+..|.
T Consensus 129 vlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~ 192 (354)
T PF05631_consen 129 VLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGF 192 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCC
Confidence 2223332 222222 1234444 455656677776654333 3334444555555565553
No 256
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.75 E-value=0.013 Score=63.14 Aligned_cols=132 Identities=12% Similarity=0.089 Sum_probs=86.2
Q ss_pred ceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCc-ce
Q 008185 358 MFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPL-RKLVGAVQILYASSLLLDLILVRQINLQFGVPN-EV 435 (574)
Q Consensus 358 ~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~-r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~-~~ 435 (574)
.+|...-+.+-+.+..|+......+|.+++.++++.+..|.+. |+.++.+.++..++.++-+.+.. .++ .-
T Consensus 58 wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~-------~~~~~~ 130 (488)
T KOG2325|consen 58 WPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAY-------VPNGVK 130 (488)
T ss_pred chhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHh-------cccchH
Confidence 3444444578888899999888999999999999999887764 66677777777666654322221 222 22
Q ss_pred EEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Q 008185 436 FVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASL 496 (574)
Q Consensus 436 ~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~ 496 (574)
+++...=+..+++..+....-.+++...-.++|-++++..+..+-+|..+||.+...+...
T Consensus 131 y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~L 191 (488)
T KOG2325|consen 131 YLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPL 191 (488)
T ss_pred HHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhh
Confidence 2222222223333334444456777766667788888888887788888888877666553
No 257
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=96.58 E-value=0.028 Score=57.85 Aligned_cols=149 Identities=13% Similarity=0.057 Sum_probs=93.5
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHH
Q 008185 364 QCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGL 443 (574)
Q Consensus 364 ~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l 443 (574)
..-|.+..+..++......|++++.+.++...+++++|+.+....+...+..++. . ..|+.....++-.+
T Consensus 106 ~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is-----~-----~spnf~~L~~f~~l 175 (528)
T KOG0253|consen 106 EVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVIS-----G-----ASPNFASLCVFRAL 175 (528)
T ss_pred hhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhh-----c-----CCCCeehhhHHHHH
Confidence 3455667777888888888999999999999999999999887766655443321 1 12332222221111
Q ss_pred HHHHHHhhHHHH-HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHH
Q 008185 444 AETLAQFKLLPF-SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLPL 522 (574)
Q Consensus 444 ~~~~~~~~~~p~-~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l 522 (574)
. .++ +.-.|. .++..|..|...|+.-.-+. ....+|.++...+.=....++|+. |..+... +-..+.+
T Consensus 176 ~-~~g-~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr-------~~l~~~~-~pl~~~a 244 (528)
T KOG0253|consen 176 W-GFG-VGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWR-------YLLFTSS-TPLMFAA 244 (528)
T ss_pred H-hcc-CCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHH-------HHHHHHH-hHHHHHH
Confidence 1 111 111443 45677888888887766555 667788888888777777787764 3333333 3333445
Q ss_pred HHHHhcCCCHH
Q 008185 523 IWIHNVPMSET 533 (574)
Q Consensus 523 ~~~~~vp~~~~ 533 (574)
.+.+++||..+
T Consensus 245 ~f~~w~~ESpR 255 (528)
T KOG0253|consen 245 RFLVWVYESPR 255 (528)
T ss_pred HHHhhcccCcc
Confidence 56778887655
No 258
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.51 E-value=0.018 Score=63.93 Aligned_cols=116 Identities=10% Similarity=-0.036 Sum_probs=66.0
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHH
Q 008185 364 QCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGL 443 (574)
Q Consensus 364 ~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l 443 (574)
.+.|-+ ....++.....++..+...+.+++.|.+|||..++.+.++..+...+. ....+ .--.+....+
T Consensus 72 ~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~---atA~~-------~~~~iag~~l 140 (599)
T PF06609_consen 72 ADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVC---ATAQN-------MNTFIAGMVL 140 (599)
T ss_pred HhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHh---hcCCc-------HHHHHHHHHH
Confidence 446654 345566666777788888899999999999999988887776554432 11111 1011112222
Q ss_pred HHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHH
Q 008185 444 AETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGV 491 (574)
Q Consensus 444 ~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g 491 (574)
.+...+...+ ....++|+.|.+.|+..+++.....-....+|+.++.
T Consensus 141 ~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~ 187 (599)
T PF06609_consen 141 YGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQ 187 (599)
T ss_pred HHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHH
Confidence 2221222222 2334789999999987776655433333333444443
No 259
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.48 E-value=0.0089 Score=63.83 Aligned_cols=144 Identities=16% Similarity=0.036 Sum_probs=85.7
Q ss_pred cCCCchhHHHHH----HHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehh
Q 008185 366 LNINPSVIGMSR----VIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFA 441 (574)
Q Consensus 366 ~g~s~~~~gl~~----i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~ 441 (574)
+|+++.+..-.+ ....+..++|+++.||+ .|.|+.+.++.+++++..+... ... . .....+...
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~---LG~~~tI~lGail~~iGh~~L~-~~~-------~-~~~~gl~i~ 123 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRV---LGTRRTIVLGAILMAIGHLVLA-ISS-------V-SGPGGLYIG 123 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHHh-ccc-------c-ccccHHHHH
Confidence 668876543332 23334455555555554 5788888888888777655321 110 0 011111122
Q ss_pred HHHHHHHHhhHHHH-HHHHHhhcCCC--hhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHH
Q 008185 442 GLAETLAQFKLLPF-SMLLARLCPQG--CEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAA 518 (574)
Q Consensus 442 ~l~~~~~~~~~~p~-~~l~~~~~p~~--~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ 518 (574)
+....++...+=|. ..++.|..|++ .|-..++++....|+|+.++|.+.+.+.+..|+ ...+..+++..
T Consensus 124 L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~--------~~gF~~aavGm 195 (498)
T COG3104 124 LALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGW--------HVGFGLAAVGM 195 (498)
T ss_pred HHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCH--------HHHHHHHHHHH
Confidence 33333443333232 46677887654 356678888888899999999999999998874 34566666666
Q ss_pred HHHHHHHHhcC
Q 008185 519 LLPLIWIHNVP 529 (574)
Q Consensus 519 ll~l~~~~~vp 529 (574)
.++++.+...+
T Consensus 196 ~~gl~~f~~~~ 206 (498)
T COG3104 196 IIGLVIFLLGR 206 (498)
T ss_pred HHHHHHHHHcc
Confidence 66666655444
No 260
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.40 E-value=0.15 Score=53.49 Aligned_cols=30 Identities=10% Similarity=-0.062 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 008185 380 GQSMLLSLTVFYDRYWKKVPLRKLVGAVQILY 411 (574)
Q Consensus 380 ~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~ 411 (574)
..+..++|..++.++ ++..+|.+.+..++-
T Consensus 292 fN~~d~vG~~~a~~~--~~~~~r~l~i~v~lR 321 (406)
T KOG1479|consen 292 FNVFDLIGSILAALL--TWPDPRKLTIPVLLR 321 (406)
T ss_pred hHHHHHhhhhhhhcc--cCCCCceehHHHHHH
Confidence 567777885555443 233334444444444
No 261
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.21 E-value=0.43 Score=51.40 Aligned_cols=38 Identities=11% Similarity=-0.030 Sum_probs=24.5
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHH
Q 008185 456 SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGL 493 (574)
Q Consensus 456 ~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l 493 (574)
+++..+..+++++..+-.+.+....+|..+|+.++-.+
T Consensus 394 m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 394 MCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666667776666676667777777777665433
No 262
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=96.13 E-value=0.29 Score=54.52 Aligned_cols=152 Identities=20% Similarity=0.138 Sum_probs=88.1
Q ss_pred HHHHHHhcCCChhHHHHHHHHhhhhhhhhh-hheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccC----------
Q 008185 138 NFHMAHNLSLHPSTLQLVQNSGNLPMVAKP-LYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPV---------- 206 (574)
Q Consensus 138 ~~~l~~~~~~s~~~~~l~~s~~~l~~~~~p-l~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~---------- 206 (574)
..|+.+++|.+...+.-..+.+.......| +.+.++|.+ .+|-+.+.++.++..+...++.+...
T Consensus 61 v~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f----~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~ 136 (571)
T KOG1237|consen 61 VTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSF----LGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCK 136 (571)
T ss_pred HHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHH----hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Confidence 347788899888666666666655445555 579999976 35666666666554444332222110
Q ss_pred --------ccchHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhc---c-c--CccchHHHHHHHHHHHHHHHHHHHHH
Q 008185 207 --------AAKALP---NLMACVLLSNLGASITEVAKDALVAEYGQ---K-N--GIVGLQSYAFMAAASGGILGNLFGGY 269 (574)
Q Consensus 207 --------~~~~~~---~l~~~~~l~~~g~~~~~~~~~a~i~d~~~---~-~--~rg~~~s~~~~~~~~G~~igp~igg~ 269 (574)
+...-. .+....-+..+|.+..-+...+.-+|-.+ + + ....-+.+++...++|..++-.+..+
T Consensus 137 ~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vy 216 (571)
T KOG1237|consen 137 FKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVY 216 (571)
T ss_pred CCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHh
Confidence 100111 11111222233333322223344466655 2 2 22355667777788999998888888
Q ss_pred hhccCChhHHHHHHHHHHHHHHHH
Q 008185 270 FLLKTPPTTMFLVFAVLLSLQLAI 293 (574)
Q Consensus 270 l~~~~gwr~~f~i~ai~~~~~~~~ 293 (574)
+-++.||.+-|.+..+..++..++
T Consensus 217 iq~~~~w~lgf~i~~~~~~lai~i 240 (571)
T KOG1237|consen 217 IQDNVGWKLGFGIPTVLNALAILI 240 (571)
T ss_pred hhhcccceeeccHHHHHHHHHHHH
Confidence 767899999999887776655544
No 263
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.11 E-value=0.034 Score=58.68 Aligned_cols=129 Identities=16% Similarity=-0.002 Sum_probs=79.0
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceE-Eee-
Q 008185 362 QTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVF-VLC- 439 (574)
Q Consensus 362 ~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~-~l~- 439 (574)
....|| +....-+..++.++..+.-++..-++.|++|.|..+.+++.+..+...+-+..... .+++.+. .++
T Consensus 71 ~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p-----~v~~~f~~~l~~ 144 (480)
T KOG2563|consen 71 VNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLP-----FVPPLFRRPLTH 144 (480)
T ss_pred HHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCc-----cccccchhhhhH
Confidence 344577 55555566677777777777777889999999999988888877766554333211 1222221 111
Q ss_pred hhHHHHHHHHhhHHHHH-HHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Q 008185 440 FAGLAETLAQFKLLPFS-MLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASL 496 (574)
Q Consensus 440 ~~~l~~~~~~~~~~p~~-~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~ 496 (574)
.+......++..++-+. -+..-.+|+++|+++..+-.+...+|.++|.++..++...
T Consensus 145 ~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~ 202 (480)
T KOG2563|consen 145 TGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPS 202 (480)
T ss_pred HhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCC
Confidence 11122222332222111 2234468999999998887777788888887777666554
No 264
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.05 E-value=0.19 Score=54.43 Aligned_cols=124 Identities=12% Similarity=0.023 Sum_probs=74.9
Q ss_pred hhHHHHHHHHHHHHHHH-HHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhccc------------CcC-----
Q 008185 371 SVIGMSRVIGQSMLLSL-TVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQF------------GVP----- 432 (574)
Q Consensus 371 ~~~gl~~i~~~ig~lig-~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~------------~~~----- 432 (574)
+.+..+.....+.+.+. ..++.++.+|+++++++.+.........++ +.++...+... ..+
T Consensus 43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~l-F~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~ 121 (472)
T TIGR00769 43 EIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFAL-FAFVIYPLSDLLHPTALADKLLSLLPPGFMG 121 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHH-HHHHHhcchhhcCCcHHHHHHHhhcchhhHH
Confidence 45666666665555555 788999999999999876654443332222 11211101000 000
Q ss_pred -----cceEEeehhHHHHHHHHhhHH-HHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 008185 433 -----NEVFVLCFAGLAETLAQFKLL-PFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLAS 495 (574)
Q Consensus 433 -----~~~~~l~~~~l~~~~~~~~~~-p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~ 495 (574)
..|....+....+..+.+... -.+.+++|++..++..+.++++....++|..+|+.+...+.+
T Consensus 122 ~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 122 FIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011111222233333433332 456789999999999999999999999999998887777664
No 265
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.99 E-value=0.0012 Score=72.89 Aligned_cols=173 Identities=12% Similarity=0.022 Sum_probs=1.1
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhh--hhh----cc--------
Q 008185 363 TQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVR--QIN----LQ-------- 428 (574)
Q Consensus 363 ~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~--~~~----~~-------- 428 (574)
...++++..+.|++....-++.++...+..++..|.++.+.+.++.+++++..++..+-.. +.. ..
T Consensus 30 ErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~ 109 (539)
T PF03137_consen 30 ERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSI 109 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccc
Confidence 4568999999999999999999999988889998888778888887777766553221100 000 00
Q ss_pred ---cC-------------------cCcceEEeehhHHHHHHHHhhHHHH----HHHHHhhcCCChhHHHHHHHHHHHHhH
Q 008185 429 ---FG-------------------VPNEVFVLCFAGLAETLAQFKLLPF----SMLLARLCPQGCEGSLTSFSASALCLS 482 (574)
Q Consensus 429 ---~~-------------------~~~~~~~l~~~~l~~~~~~~~~~p~----~~l~~~~~p~~~~gt~~gl~~~~~~lg 482 (574)
.- ............+.+.+.++...|. .+++-|.++++..+.+.|++.++..+|
T Consensus 110 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lG 189 (539)
T PF03137_consen 110 SSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILG 189 (539)
T ss_dssp ------------------------------------------SSS-----------------------------------
T ss_pred ccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhcc
Confidence 00 0000001111122223333333443 367888999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh-Cc----------ccCC--C-CChhHHHHHHHHHHHHHHHHHHhcCCCHHHH
Q 008185 483 SIASGFLGVGLASLT-GI----------TFGD--Y-SSLPVGIVIQFLAALLPLIWIHNVPMSETII 535 (574)
Q Consensus 483 ~~lg~~i~g~l~~~~-g~----------~~~~--~-~~l~~~~li~~~~~ll~l~~~~~vp~~~~~~ 535 (574)
-++|=++++.+...+ ++ +..| + ...|+.+++++.+.++..+-+++.|++-+..
T Consensus 190 Pa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~ 256 (539)
T PF03137_consen 190 PALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGT 256 (539)
T ss_dssp -------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCc
Confidence 888888888776543 21 1111 1 2456667777777666555566666555544
No 266
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=95.85 E-value=0.026 Score=56.47 Aligned_cols=133 Identities=17% Similarity=0.140 Sum_probs=75.7
Q ss_pred HHHHHHhhhhh-hhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHH
Q 008185 153 QLVQNSGNLPM-VAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVA 231 (574)
Q Consensus 153 ~l~~s~~~l~~-~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~ 231 (574)
|.++-.-.+|. +++...-...||+| ++.|..+ ..++.+.++.+.++..+ .++-+.+..++.++.+..++.
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfp---f~~Ri~~--~v~~sa~s~~lVafs~s----~~~sL~GV~~aSissGlGEiT 135 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFP---FGFRIAL--VVLLSALSFFLVAFSNS----VPMSLLGVVFASISSGLGEIT 135 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcc---cchHHHH--HHHHHhcceEEEEeccc----hhHHHhhhhhhhhcCCcceee
Confidence 33333334554 33555556778874 4455433 45566777776666543 344455666677777777665
Q ss_pred HHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhc--cCChhHHHHHHHHHHHHHHHHhh-hccc
Q 008185 232 KDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLL--KTPPTTMFLVFAVLLSLQLAISF-SARE 299 (574)
Q Consensus 232 ~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~--~~gwr~~f~i~ai~~~~~~~~~~-~lpE 299 (574)
..++-+.. + + ...+-+..+...++++|..--.++.+ .++.|.+..+...++++.....| .+++
T Consensus 136 FL~lss~Y-~---~-~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 136 FLALSSRY-P---S-IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred hhhhhccC-C---C-ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 54443332 1 1 22233444444566666665556655 46788888888888877666644 3443
No 267
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.64 E-value=0.14 Score=55.34 Aligned_cols=138 Identities=14% Similarity=0.089 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHH
Q 008185 379 IGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSML 458 (574)
Q Consensus 379 ~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l 458 (574)
..++..++.+.+.+-+.||+|+|..+.+..+...+..+.. .+.. .|+.+ ...+..+.. ..+.-..++
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~-~~~~----------~~~~~-~~~l~g~~~-~~~s~~~a~ 136 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCL-LFQG----------YWFFL-LLGLSGGFS-AIFSVGFAY 136 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHH-HHHH----------HHHhh-hcccccchh-hhhhhhhhh
Confidence 4466777788888999999999887766544433222211 1111 11111 000100011 111122456
Q ss_pred HHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHHHH-HHhcCCCHHHHHH
Q 008185 459 LARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLPLIW-IHNVPMSETIIEK 537 (574)
Q Consensus 459 ~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l~~-~~~vp~~~~~~~~ 537 (574)
.++.+..+.|...+|+.+.....+..++|.+++.+....|+ ...+.++.+..++.+.+ ...+||+..+.++
T Consensus 137 vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~--------a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 137 VADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGI--------ALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred eeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCc--------hHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 78888999999999999999999999999999999998663 34455566555555555 4677776554443
No 268
>PF12832 MFS_1_like: MFS_1 like family
Probab=95.61 E-value=0.021 Score=45.56 Aligned_cols=47 Identities=28% Similarity=0.468 Sum_probs=35.2
Q ss_pred hHHHHHHhcCCChhHHHHHHHHhhhhhh-hhhhheeeccccccCCCccchhHh
Q 008185 137 LNFHMAHNLSLHPSTLQLVQNSGNLPMV-AKPLYGILSDALYIGGAHRIPYIC 188 (574)
Q Consensus 137 ~~~~l~~~~~~s~~~~~l~~s~~~l~~~-~~pl~G~lsD~~~~~G~rRk~~l~ 188 (574)
.+.++++ .|+|+.++|++.++..+.-. ..|++|.++||+ .++|..+.
T Consensus 23 l~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~----~~~~~~l~ 70 (77)
T PF12832_consen 23 LPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF----GKRKVILL 70 (77)
T ss_pred hhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CccHHHHH
Confidence 3346665 89999999999998877554 488999999996 25554443
No 269
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.52 E-value=0.051 Score=57.21 Aligned_cols=82 Identities=11% Similarity=0.043 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccc---CccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHH
Q 008185 213 NLMACVLLSNLGASITEVAKDALVAEYGQKN---GIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSL 289 (574)
Q Consensus 213 ~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~---~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~ 289 (574)
.+.+...+.++|.+..-+....+.+|..+++ +|.....+++.+.++|..+++.+.+++-++.||.+.|++.++..++
T Consensus 35 ~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~ 114 (372)
T PF00854_consen 35 LFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLL 114 (372)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHH
Confidence 3556666677888877777788899998764 3455667788899999999999999998899999999998877666
Q ss_pred HHHHh
Q 008185 290 QLAIS 294 (574)
Q Consensus 290 ~~~~~ 294 (574)
..+..
T Consensus 115 ~~~~f 119 (372)
T PF00854_consen 115 ALIVF 119 (372)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 270
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=95.44 E-value=1.2 Score=46.13 Aligned_cols=170 Identities=17% Similarity=0.161 Sum_probs=82.0
Q ss_pred HHHHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhh--hhhhhhhhheeeccccccCCCccchhHhHHHH--
Q 008185 118 VLCGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGN--LPMVAKPLYGILSDALYIGGAHRIPYICIGVF-- 192 (574)
Q Consensus 118 ~~~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~--l~~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~-- 192 (574)
+.+.++|+...+.. +-......++.+ ++-+.-....+-.+.- ....++|+.|-..|.. -|++.+-...+
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~-L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~-----sr~Kvi~~~L~lq 103 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMIL-LGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGM-----SRVKVIQTWLLLQ 103 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHH-HcCceehhHHHHHHHHHhHHHhhHHHHHHHhcch-----hHHHHHHHHHhhc
Confidence 33667777777765 322233335444 4432222111111111 1245689999999964 44444322111
Q ss_pred ----HHHHHHHHhhcccCc--cchHHHHHHHHHHHHHHHHHHHHHHHHH--H--Hhhh----cccCccchH---HHHHHH
Q 008185 193 ----LQILSWGPLALFPVA--AKALPNLMACVLLSNLGASITEVAKDAL--V--AEYG----QKNGIVGLQ---SYAFMA 255 (574)
Q Consensus 193 ----~~~~~~~~~~~~~~~--~~~~~~l~~~~~l~~~g~~~~~~~~~a~--i--~d~~----~~~~rg~~~---s~~~~~ 255 (574)
..+...+...+..+. ..+.+.+..+..+...-+++......+- . .|+. ..+.+..+. +.....
T Consensus 104 NlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~i 183 (503)
T KOG2601|consen 104 NLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGI 183 (503)
T ss_pred cHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhh
Confidence 122223333333331 0123445566666554444433222111 0 1110 112232222 333344
Q ss_pred HHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHH
Q 008185 256 AASGGILGNLFGGYFLLKTPPTTMFLVFAVLLSLQLAI 293 (574)
Q Consensus 256 ~~~G~~igp~igg~l~~~~gwr~~f~i~ai~~~~~~~~ 293 (574)
-..--++.|++.|.++...+-|..-...++...+....
T Consensus 184 Dq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~vsm~~ 221 (503)
T KOG2601|consen 184 DQSTNLLAPVITGLIITFVSLRASAGTFAAWALVSMWV 221 (503)
T ss_pred hhhhhchhhhhhcccceeechhhhhhhhHHHHHHHHHH
Confidence 45677889999999998888888777777777664443
No 271
>PRK03612 spermidine synthase; Provisional
Probab=94.40 E-value=1.2 Score=49.15 Aligned_cols=166 Identities=15% Similarity=-0.013 Sum_probs=79.9
Q ss_pred HHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhhhh-hheeeccccccCCCccchhHhHH---HHHHH
Q 008185 121 GLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVAKP-LYGILSDALYIGGAHRIPYICIG---VFLQI 195 (574)
Q Consensus 121 ~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~p-l~G~lsD~~~~~G~rRk~~l~i~---~~~~~ 195 (574)
.+..|..++.+ .......-.+.-.+|-+....++++++++++++++- +.|.+.++. .| .+..+- .++..
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-----~~-~~~~~e~~i~l~~~ 93 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-----AA-GFVAVELLLALLGG 93 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-----HH-HHHHHHHHHHHHHH
Confidence 33344555554 333333334555678889999999999999888754 455554321 11 121111 11111
Q ss_pred HHHHHhhcccCccchHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhc-c
Q 008185 196 LSWGPLALFPVAAKALPNL-MACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLL-K 273 (574)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~l-~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~-~ 273 (574)
++..++............+ ....++.++..+...+....+..+. ..++-|...|-.+....+|.++|.++.+++.- .
T Consensus 94 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~ 172 (521)
T PRK03612 94 LSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLLPR 172 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHh
Confidence 1111111110000001111 1111122222222222221222221 11223556677788888999999999998764 6
Q ss_pred CChhHHHHHHHHHHHHHHHH
Q 008185 274 TPPTTMFLVFAVLLSLQLAI 293 (574)
Q Consensus 274 ~gwr~~f~i~ai~~~~~~~~ 293 (574)
+|-..+.++.+.+.+++.++
T Consensus 173 lG~~~t~~~~a~l~~~~a~~ 192 (521)
T PRK03612 173 LGLIRTAALTGSLNLLAALV 192 (521)
T ss_pred cchHHHHHHHHHHHHHHHHH
Confidence 78666666666665554443
No 272
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=94.06 E-value=0.81 Score=49.13 Aligned_cols=126 Identities=15% Similarity=0.141 Sum_probs=73.3
Q ss_pred CchhHHHHHHHHHH-HHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhh-------hcc------cCcCcc
Q 008185 369 NPSVIGMSRVIGQS-MLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQI-------NLQ------FGVPNE 434 (574)
Q Consensus 369 s~~~~gl~~i~~~i-g~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~-------~~~------~~~~~~ 434 (574)
.++.+..+-....+ ++++...++.++.++..+.+++.+.......+.+ .+.++... +.. -..|..
T Consensus 59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~-LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~ 137 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFA-LFAFVIYPYKDILHPDPEFSRDLFADLPMF 137 (509)
T ss_pred cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH-HHHHHHhccccccCCCHHHHHHHHhhCCcc
Confidence 35556666555555 7778888999999999998887654433322222 22222110 100 011212
Q ss_pred --eEEee--------hhHHHHHHHHhhH-HHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 008185 435 --VFVLC--------FAGLAETLAQFKL-LPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLAS 495 (574)
Q Consensus 435 --~~~l~--------~~~l~~~~~~~~~-~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~ 495 (574)
++++. ...+.+..+.+.. .-.+.++.|++..++..+.+++++...|++..+++.+...+.+
T Consensus 138 l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 138 LKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred ceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33321 1122222232221 1235678999999999999999999999988887777666655
No 273
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=93.78 E-value=0.99 Score=41.23 Aligned_cols=93 Identities=17% Similarity=0.164 Sum_probs=65.3
Q ss_pred heeeccccccCCCccchhHhHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccch
Q 008185 169 YGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGL 248 (574)
Q Consensus 169 ~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~ 248 (574)
...+.+++ +.|..++++.+... .+.+..+.++ .+.++..-.+.++|.+........++.+..+++++++-
T Consensus 57 ~P~iv~~l-----g~K~sm~lg~~~y~-~y~~~~~~~~----~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~ 126 (156)
T PF05978_consen 57 APSIVNKL-----GPKWSMILGSLGYA-IYIASFFYPN----SYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRN 126 (156)
T ss_pred HHHHHHHH-----hhHHHHHHHHHHHH-HHHHHHHhhh----HHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhH
Confidence 33455654 46666776766533 2322222222 34456677788899999998888999999988889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 008185 249 QSYAFMAAASGGILGNLFGGYFL 271 (574)
Q Consensus 249 ~s~~~~~~~~G~~igp~igg~l~ 271 (574)
.++.+.....+.++|.++.-++.
T Consensus 127 ~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 127 TGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888888887765553
No 274
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=93.75 E-value=1.3 Score=43.66 Aligned_cols=50 Identities=14% Similarity=0.187 Sum_probs=27.8
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHhhc-------cCChhHHHHHHHHHHHHHHHHhh
Q 008185 244 GIVGLQSYAFMAAASGGILGNLFGGYFLL-------KTPPTTMFLVFAVLLSLQLAISF 295 (574)
Q Consensus 244 ~rg~~~s~~~~~~~~G~~igp~igg~l~~-------~~gwr~~f~i~ai~~~~~~~~~~ 295 (574)
+|+..+.....+.++|.++.-+. ++.. ...|++++-+.+++..+.+++.+
T Consensus 3 ~K~~~s~~n~~gf~iG~ii~~ip--F~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ 59 (267)
T PF07672_consen 3 KKSILSQFNPWGFNIGTIIVNIP--FLISSSVVIALTNNWQWILSIFILLIFIPLILYI 59 (267)
T ss_pred ccceeeeeccccchhhHHHHHhh--HHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444443334445565554332 2221 23599999998877766666543
No 275
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.70 E-value=0.073 Score=59.90 Aligned_cols=174 Identities=15% Similarity=0.065 Sum_probs=113.7
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhh--hh------hc--ccCcC
Q 008185 363 TQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVR--QI------NL--QFGVP 432 (574)
Q Consensus 363 ~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~--~~------~~--~~~~~ 432 (574)
.+.++++..+.|++....-+|.++....+.++..|..+.+++.++.+++++..++..+-.. .. .. ....+
T Consensus 124 ErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~ 203 (735)
T KOG3626|consen 124 ERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENP 203 (735)
T ss_pred hhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCC
Confidence 3458888888999888888888888888889988888888888888777766654322110 00 00 00000
Q ss_pred ---------------------c-------ceEEeehhHHHHHHHHhhHHHH----HHHHHhhcCCChhHHHHHHHHHHHH
Q 008185 433 ---------------------N-------EVFVLCFAGLAETLAQFKLLPF----SMLLARLCPQGCEGSLTSFSASALC 480 (574)
Q Consensus 433 ---------------------~-------~~~~l~~~~l~~~~~~~~~~p~----~~l~~~~~p~~~~gt~~gl~~~~~~ 480 (574)
+ .....+...+.+.+.++.-.|. ..++-|.+.++....+.|+..++..
T Consensus 204 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~ 283 (735)
T KOG3626|consen 204 SSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAI 283 (735)
T ss_pred ccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHH
Confidence 0 0011111222233333333333 3567788888888999999999999
Q ss_pred hHHHHHHHHHHHHHHhh-Cc-------ccCC--C-CChhHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Q 008185 481 LSSIASGFLGVGLASLT-GI-------TFGD--Y-SSLPVGIVIQFLAALLPLIWIHNVPMSETIIE 536 (574)
Q Consensus 481 lg~~lg~~i~g~l~~~~-g~-------~~~~--~-~~l~~~~li~~~~~ll~l~~~~~vp~~~~~~~ 536 (574)
+|=++|=++|+++...+ .. +..| + ...|..+++++.+.+++.+.+++.|++.++++
T Consensus 284 lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~ 350 (735)
T KOG3626|consen 284 LGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQ 350 (735)
T ss_pred hhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCcccc
Confidence 99888888888877643 22 1122 2 34567789999998888888899998777654
No 276
>PF12832 MFS_1_like: MFS_1 like family
Probab=93.65 E-value=0.24 Score=39.46 Aligned_cols=46 Identities=20% Similarity=0.225 Sum_probs=40.4
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHH
Q 008185 364 QCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQI 409 (574)
Q Consensus 364 ~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~l 409 (574)
+..|+++.++|++....-+..+++.++++.++||.++++.......
T Consensus 28 ~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 28 KQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 3599999999999999999999999999999999999888765543
No 277
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=93.49 E-value=0.89 Score=48.11 Aligned_cols=59 Identities=12% Similarity=-0.024 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 008185 212 PNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYF 270 (574)
Q Consensus 212 ~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l 270 (574)
+.+++..+.-|+.++...+-.-..+.|..++++|..+++....+-++|.+++.+++-.+
T Consensus 336 ~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 336 WIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 33334444445544555544455677777889999999999998899999888877544
No 278
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=93.48 E-value=0.5 Score=50.94 Aligned_cols=132 Identities=18% Similarity=0.187 Sum_probs=66.7
Q ss_pred eeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCC----chhHH-HHHHHHHHHHHhHHHHhhhhhhcccCcCc
Q 008185 359 FCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVP----LRKLV-GAVQILYASSLLLDLILVRQINLQFGVPN 433 (574)
Q Consensus 359 ~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~----~r~ll-~~~~ll~~~~~l~~l~l~~~~~~~~~~~~ 433 (574)
.+|+.+.+|+++.+.........+.-.+ -++++.+.|-++ +||.+ +++.++..+. ...+.+.... ..
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~-~~~~~~~~~~------~~ 84 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVS-ALVLALLPAS------ES 84 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHH-HHHHHhcccc------cc
Confidence 3467888999998877665444433332 234455555442 34443 3444443222 2222221110 00
Q ss_pred ceEEeehhHHHHHHH-HhhHHHHHHHHHhhc---CCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCc
Q 008185 434 EVFVLCFAGLAETLA-QFKLLPFSMLLARLC---PQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGI 499 (574)
Q Consensus 434 ~~~~l~~~~l~~~~~-~~~~~p~~~l~~~~~---p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~ 499 (574)
..-......+...++ .+.-+..=++..|.. |++ +|...+.......+|+.++..++|.+.+..+.
T Consensus 85 s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~ 153 (433)
T PF03092_consen 85 SAAIAVVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGP 153 (433)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCC
Confidence 110011111111111 111122223344443 444 78888888889999999999999998887654
No 279
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=93.29 E-value=0.97 Score=41.30 Aligned_cols=105 Identities=12% Similarity=-0.078 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHH
Q 008185 376 SRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPF 455 (574)
Q Consensus 376 ~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~ 455 (574)
.+....+..++ .+.+.++.+.|..++++.+++.+... ... .++.+..+....+.++.+...+..-
T Consensus 46 ~Y~~~~~s~l~----~P~iv~~lg~K~sm~lg~~~y~~y~~-~~~----------~~~~~~l~~~s~l~G~~~a~lW~aq 110 (156)
T PF05978_consen 46 LYGSFAISCLF----APSIVNKLGPKWSMILGSLGYAIYIA-SFF----------YPNSYTLYPASALLGFGAALLWTAQ 110 (156)
T ss_pred HHHHHHHHHHh----HHHHHHHHhhHHHHHHHHHHHHHHHH-HHH----------hhhHHHHHHHHHHHhhhhHHhhHhh
Confidence 34444444444 44455667888888888776654322 111 1222222222333333333444444
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 008185 456 SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLAS 495 (574)
Q Consensus 456 ~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~ 495 (574)
-.++.+...++.+++..|++-.+.+.+..+|.++.-.+..
T Consensus 111 g~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 111 GTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred hHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678888899999999999999999988888777655543
No 280
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.95 E-value=0.01 Score=57.74 Aligned_cols=72 Identities=25% Similarity=0.460 Sum_probs=41.5
Q ss_pred HHHHHHHhhhccchh-hhhHHHHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccc------cccCCCccchhHhHHH
Q 008185 120 CGLGYWVQGFRCFPW-LALNFHMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDA------LYIGGAHRIPYICIGV 191 (574)
Q Consensus 120 ~~~~~f~~~~~~~~~-~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~------~~~~G~rRk~~l~i~~ 191 (574)
...+++..-+....| ..+..++++ .|+++.....++-+..+..++ .|+.|..+|. +...| ||+.|-.++.
T Consensus 22 yGvGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G-~~~~wh~~gt 99 (412)
T KOG4830|consen 22 YGVGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIG-RRMSWHLIGT 99 (412)
T ss_pred echhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhc-ceeeeeeccc
Confidence 455555544432111 112225555 688887777766666666666 7888877774 12234 7787776665
Q ss_pred HH
Q 008185 192 FL 193 (574)
Q Consensus 192 ~~ 193 (574)
++
T Consensus 100 ~l 101 (412)
T KOG4830|consen 100 VL 101 (412)
T ss_pred EE
Confidence 54
No 281
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=92.62 E-value=0.26 Score=39.96 Aligned_cols=69 Identities=20% Similarity=0.201 Sum_probs=50.4
Q ss_pred chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhhhh-hheeeccccccCCCccchhHhHHHHHHHHHHHHhhccc
Q 008185 132 FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVAKP-LYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFP 205 (574)
Q Consensus 132 ~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~p-l~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~ 205 (574)
+.+.++.+.+.++.++|.++.+++.+...++|.++- ..+.+.++ .+++..+..+.+...++...+++..
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRH-----SRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344555568888899999999999999999999855 45666664 2445556667777777777666654
No 282
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=92.45 E-value=1.7 Score=49.43 Aligned_cols=158 Identities=16% Similarity=0.039 Sum_probs=75.5
Q ss_pred eehccccCCCchhHHHHHHH----HHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcce
Q 008185 360 CYQTQCLNINPSVIGMSRVI----GQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEV 435 (574)
Q Consensus 360 ~~~~~~~g~s~~~~gl~~i~----~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~ 435 (574)
.|+++.+|++.......+.. ..+..++|+.+.+ +++|+++.+.++.+++.+...+.. +. ....... +...
T Consensus 12 lYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD---~~lG~~~tIl~~~ii~~lG~~lla-i~-a~~~~~~-~~~~ 85 (654)
T TIGR00926 12 LYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIAD---GWLGKFKTILYLSIVYVVGHALLS-FG-AIPSSGH-PLHD 85 (654)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhhHHHHHHHHHHHHHHHHHHH-hc-cCccccc-chHH
Confidence 35556688876655443222 2223333444443 345777777777666655443221 11 0000000 0000
Q ss_pred EEeehhHHHHHHHHhhHHHH-HHHHHhhcCCC---hhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHH
Q 008185 436 FVLCFAGLAETLAQFKLLPF-SMLLARLCPQG---CEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGI 511 (574)
Q Consensus 436 ~~l~~~~l~~~~~~~~~~p~-~~l~~~~~p~~---~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~ 511 (574)
......+....+|....-|. .++..+-.+++ .+-+.|.++....|+|+.+++.+.+.+.+..+-- +.+...+..+
T Consensus 86 ~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~f-g~~~~~~~aF 164 (654)
T TIGR00926 86 LLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCF-GCQDCYPLAF 164 (654)
T ss_pred HHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-ccCcchHHHH
Confidence 10111122222332223332 34555555543 3567788888888888888888887776543210 1122345556
Q ss_pred HHHHHHHHHHHHH
Q 008185 512 VIQFLAALLPLIW 524 (574)
Q Consensus 512 li~~~~~ll~l~~ 524 (574)
.+++++.+++++.
T Consensus 165 ~i~~i~m~ia~lv 177 (654)
T TIGR00926 165 GVPAILMILALIV 177 (654)
T ss_pred HHHHHHHHHHHHH
Confidence 6666655554433
No 283
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=92.09 E-value=3 Score=45.59 Aligned_cols=126 Identities=19% Similarity=0.178 Sum_probs=71.2
Q ss_pred CchhHHHHHHHH-HHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcc-------------
Q 008185 369 NPSVIGMSRVIG-QSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNE------------- 434 (574)
Q Consensus 369 s~~~~gl~~i~~-~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~------------- 434 (574)
+++.+-.+-+.. .-++++-..++.++.+++++.+++.+..........+ +.++.-.+...-.++.
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~-f~~vlyP~~~~lhp~~~~~~~~~~~~~~~ 134 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFAL-FAFVLYPNRDILHPDAFADKLLAILPPGF 134 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH-HHHHHhhchhhcCCCHHHHHhhhhccchH
Confidence 455555553322 2355556778999999999999876554333222221 1111101100000110
Q ss_pred ---------eEEeehhHHHHHHHHhhH-HHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 008185 435 ---------VFVLCFAGLAETLAQFKL-LPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLAS 495 (574)
Q Consensus 435 ---------~~~l~~~~l~~~~~~~~~-~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~ 495 (574)
|-..++..+.+..+.+.. .-.+.+++|++..++..+.|+++....|+|..+++.+...+.+
T Consensus 135 ~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 135 KGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011122233333222 2246789999999999999999999999999888877777766
No 284
>PRK03612 spermidine synthase; Provisional
Probab=90.40 E-value=4.3 Score=44.81 Aligned_cols=49 Identities=16% Similarity=0.110 Sum_probs=29.6
Q ss_pred HHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHH-HHhhCcc
Q 008185 452 LLPFSMLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGL-ASLTGIT 500 (574)
Q Consensus 452 ~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l-~~~~g~~ 500 (574)
..|+.+-+......+..|...|-......+|+.+|+++.+++ ...+|..
T Consensus 127 ~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~ 176 (521)
T PRK03612 127 EIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLI 176 (521)
T ss_pred HHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchH
Confidence 356543333222222345666777777888999998877664 4577753
No 285
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=90.30 E-value=4.4 Score=40.30 Aligned_cols=134 Identities=16% Similarity=0.115 Sum_probs=74.6
Q ss_pred cccceeehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcc
Q 008185 355 SGSMFCYQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNE 434 (574)
Q Consensus 355 ~~~~~~~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~ 434 (574)
.+.+.||....|||..+++|.+++.+.-.+++-+.+.+-+.++-|+|+.-..-++.+.++++ +. ...+
T Consensus 56 QgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi------TK------hSpq 123 (454)
T KOG4332|consen 56 QGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI------TK------HSPQ 123 (454)
T ss_pred cCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH------hh------cCCc
Confidence 34556677778999999999998888777777777788899998888753322333333322 11 2345
Q ss_pred eEEeehhHHHHHHHH-hhHHHH-HHHHHhhcCC-----ChhHHHHHHHHHHHH-hHHHHHHHHHHHHHHhhCcc
Q 008185 435 VFVLCFAGLAETLAQ-FKLLPF-SMLLARLCPQ-----GCEGSLTSFSASALC-LSSIASGFLGVGLASLTGIT 500 (574)
Q Consensus 435 ~~~l~~~~l~~~~~~-~~~~p~-~~l~~~~~p~-----~~~gt~~gl~~~~~~-lg~~lg~~i~g~l~~~~g~~ 500 (574)
+.++..+-..+++.. ..+..+ .-++.|...+ +-....++-...+.| +-..++...+-.+.++++..
T Consensus 124 YkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slG 197 (454)
T KOG4332|consen 124 YKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLG 197 (454)
T ss_pred eEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccC
Confidence 555544433333332 222222 2346665522 222333333333333 33344555666677777654
No 286
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=89.83 E-value=13 Score=39.63 Aligned_cols=71 Identities=21% Similarity=0.242 Sum_probs=42.2
Q ss_pred HHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHHHHHHhcCCCHH
Q 008185 457 MLLARLCPQGCEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLPLIWIHNVPMSET 533 (574)
Q Consensus 457 ~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l~~~~~vp~~~~ 533 (574)
.++-...|++..-++.+-..+..-+|..+|..+|=.+...-+ .+|.. +..+......+++++.+++|..+.
T Consensus 116 sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~---~sy~~---L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 116 SYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGG---VSYFQ---LNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCHHH---HHHHHHHHHHHHHHHHHHcCCCCc
Confidence 444455678877788888888788888888777766655322 22322 223333333445555566776544
No 287
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=86.96 E-value=2.4 Score=34.40 Aligned_cols=54 Identities=17% Similarity=0.015 Sum_probs=43.7
Q ss_pred ehccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Q 008185 361 YQTQCLNINPSVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASS 414 (574)
Q Consensus 361 ~~~~~~g~s~~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~ 414 (574)
...++.++|..+.|++...+.+|-++|.....++.++...++++..+.++.++.
T Consensus 17 ~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~ 70 (85)
T PF06779_consen 17 LMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLS 70 (85)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 456779999999999999999999999999998888777777777665554443
No 288
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=85.57 E-value=9.3 Score=37.03 Aligned_cols=117 Identities=20% Similarity=0.093 Sum_probs=67.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHh
Q 008185 371 SVIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQF 450 (574)
Q Consensus 371 ~~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~ 450 (574)
...++......++..++..+.+++.||+++|+.+..+........+. ..+... ...+. +.......+++..
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~-~~~~~~~~g~~~~ 109 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLL-LALAPN-------VGLAL-LLILRLLQGLGGG 109 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHH-HHhCcc-------chHHH-HHHHHHHHHhhhH
Confidence 35667777777777777788889999888886666555432222111 111100 00111 1111111222222
Q ss_pred hHHH-HHHHHHhhcCC-ChhHHHHHHHHH-HHHhHHHHHHHHHHHHHHh
Q 008185 451 KLLP-FSMLLARLCPQ-GCEGSLTSFSAS-ALCLSSIASGFLGVGLASL 496 (574)
Q Consensus 451 ~~~p-~~~l~~~~~p~-~~~gt~~gl~~~-~~~lg~~lg~~i~g~l~~~ 496 (574)
...| ...++.+..|+ +.++...+.... ...+|..+++.+++.+...
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 110 GLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333 35678888887 678888888888 5777888888777777665
No 289
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=81.92 E-value=14 Score=36.70 Aligned_cols=106 Identities=15% Similarity=0.068 Sum_probs=50.1
Q ss_pred Hhhhhhhhhhh-heeeccccccCCCccchhHh----HHHHHHHHHHHHhhccc-CccchHHHHHHHHHHH-HHHHHHHHH
Q 008185 158 SGNLPMVAKPL-YGILSDALYIGGAHRIPYIC----IGVFLQILSWGPLALFP-VAAKALPNLMACVLLS-NLGASITEV 230 (574)
Q Consensus 158 ~~~l~~~~~pl-~G~lsD~~~~~G~rRk~~l~----i~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~l~-~~g~~~~~~ 230 (574)
++..++.++|+ .|+.+-. .++||+++. .+.++.+++.+..+... ++......+.++-|+. .++-++..+
T Consensus 149 ~fv~g~~~G~~~ig~~nkt----~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~V 224 (267)
T PF07672_consen 149 LFVAGYFLGPFTIGLWNKT----NYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGV 224 (267)
T ss_pred HHHHHHhhhceeeccchhh----hhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 34445666774 5877764 468888865 33444444444432222 2221223333333332 223333332
Q ss_pred HHHHHHHhh--hcccCccchHHHHHHHHHHHHHHHHHHHH
Q 008185 231 AKDALVAEY--GQKNGIVGLQSYAFMAAASGGILGNLFGG 268 (574)
Q Consensus 231 ~~~a~i~d~--~~~~~rg~~~s~~~~~~~~G~~igp~igg 268 (574)
... +--|. .+|++-|...|+.+..+.+.-.+.-++..
T Consensus 225 iL~-lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S 263 (267)
T PF07672_consen 225 ILN-LPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILS 263 (267)
T ss_pred Hhc-ChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHH
Confidence 211 11121 12355677777777666665555554443
No 290
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=81.64 E-value=0.66 Score=49.33 Aligned_cols=127 Identities=18% Similarity=0.084 Sum_probs=70.9
Q ss_pred cccCCCchhHHHHHHHHHHHHHHH----HHHHHHHHhcCCchhHHHHHHHHHHHHHhHHHHhhhhhhcccCcCcc-e---
Q 008185 364 QCLNINPSVIGMSRVIGQSMLLSL----TVFYDRYWKKVPLRKLVGAVQILYASSLLLDLILVRQINLQFGVPNE-V--- 435 (574)
Q Consensus 364 ~~~g~s~~~~gl~~i~~~ig~lig----~~l~~~l~~r~~~r~ll~~~~ll~~~~~l~~l~l~~~~~~~~~~~~~-~--- 435 (574)
..+|.+....++....+-+..++- +...+++-.|+||||.++.+..+.+.+.++.+.........++ ++. .
T Consensus 60 ~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lg-d~~~~~~~ 138 (498)
T KOG0637|consen 60 QSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLG-DNERKPVK 138 (498)
T ss_pred HHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhc-CCcccccc
Confidence 347777777777655443333322 2345666678999998877665555555543322222111111 111 1
Q ss_pred -EE----eehhHHHHHHHHhhHHHHHHHHHhhcCCChhHH-HHHHHHHHHHhHHHHHHHHHH
Q 008185 436 -FV----LCFAGLAETLAQFKLLPFSMLLARLCPQGCEGS-LTSFSASALCLSSIASGFLGV 491 (574)
Q Consensus 436 -~~----l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt-~~gl~~~~~~lg~~lg~~i~g 491 (574)
.. +....+..+..+....|.-+++.+++..+.+.+ +.+.+..+..+|+.+|-.+++
T Consensus 139 ~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 139 PRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred hHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 11 111222333344555677788899987777766 777777777777777655554
No 291
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=81.56 E-value=37 Score=34.37 Aligned_cols=54 Identities=19% Similarity=0.281 Sum_probs=33.7
Q ss_pred HHHHhcCCChhHHHHHHHHhhhhhhhhhhheeeccccccCCCccchhHhHHHHHHHHHHHH
Q 008185 140 HMAHNLSLHPSTLQLVQNSGNLPMVAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGP 200 (574)
Q Consensus 140 ~l~~~~~~s~~~~~l~~s~~~l~~~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~ 200 (574)
.++|..|+-....++++++....++-+| -.++ .++||+|--.+ +++..++..++
T Consensus 50 LLADa~Hml~D~~al~lal~A~~~a~r~----~~~~-~TfGy~R~eiL--aa~~nav~Li~ 103 (296)
T COG1230 50 LLADALHMLSDALALLLALIAIKLARRP----ATKR-FTFGYKRLEIL--AAFLNALLLIV 103 (296)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhcCC----CCCC-CCccHhHHHHH--HHHHHHHHHHH
Confidence 6788888888888888887776666555 2333 35677665443 44444444333
No 292
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=76.81 E-value=32 Score=37.51 Aligned_cols=57 Identities=16% Similarity=0.011 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccC
Q 008185 218 VLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKT 274 (574)
Q Consensus 218 ~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~ 274 (574)
-.+..+......+...|+-+.+++|.-.|.-|.+.+...++|+---..+.-++++.+
T Consensus 412 ~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 412 HVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 445566677777888899999999999999999999888877654443333333333
No 293
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=76.43 E-value=39 Score=36.39 Aligned_cols=124 Identities=12% Similarity=0.052 Sum_probs=70.2
Q ss_pred HHHHhcCCChhHHHHHHHHhhhhhhh-hhhheeeccccccCCCccchhH-hHHHHHHHHHHHHhhcccCcc---chHHHH
Q 008185 140 HMAHNLSLHPSTLQLVQNSGNLPMVA-KPLYGILSDALYIGGAHRIPYI-CIGVFLQILSWGPLALFPVAA---KALPNL 214 (574)
Q Consensus 140 ~l~~~~~~s~~~~~l~~s~~~l~~~~-~pl~G~lsD~~~~~G~rRk~~l-~i~~~~~~~~~~~~~~~~~~~---~~~~~l 214 (574)
|++.. |+++..+|..-++..+.-.. ..++.++.+|+ |..|--.. +.....+........+.+.++ .....+
T Consensus 284 yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri---Glvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l 359 (432)
T PF06963_consen 284 YLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI---GLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLL 359 (432)
T ss_pred HHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHH
Confidence 55664 99999999888877664333 34455666665 43332211 111111111111111222211 122223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHH
Q 008185 215 MACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFG 267 (574)
Q Consensus 215 ~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~ig 267 (574)
+.+..+.-+|.=..|....-++-|..|+++||...+.-....++--++--+++
T Consensus 360 ~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 360 LGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred HHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 33444556676677888777788888889999998887777776666655444
No 294
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=73.09 E-value=16 Score=38.41 Aligned_cols=136 Identities=13% Similarity=0.055 Sum_probs=73.8
Q ss_pred hcCCChhHHHHHHHHhhhhhhh-hh-hheeeccc-cccC-CCccchhHhHH-HHHHHHHHHHhhcccCc---cchHHHHH
Q 008185 144 NLSLHPSTLQLVQNSGNLPMVA-KP-LYGILSDA-LYIG-GAHRIPYICIG-VFLQILSWGPLALFPVA---AKALPNLM 215 (574)
Q Consensus 144 ~~~~s~~~~~l~~s~~~l~~~~-~p-l~G~lsD~-~~~~-G~rRk~~l~i~-~~~~~~~~~~~~~~~~~---~~~~~~l~ 215 (574)
|.|++.++.+++. +..+|.-+ .| ..|.++.. -|.- ..|+.+|=+.+ ..-.++.+..--+.... +..+..+.
T Consensus 294 e~Gv~ke~Lal~~-v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~ 372 (510)
T KOG3574|consen 294 EHGVPKEELALIA-VPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILL 372 (510)
T ss_pred HcCCChhHheeee-eehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHH
Confidence 4799999988765 66666533 45 35666552 1110 11333332222 22233333322222201 11111111
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 008185 216 AC-VLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLLKTPPTTMF 280 (574)
Q Consensus 216 ~~-~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~~~gwr~~f 280 (574)
++ ..+.+.......+...+..+.+++|.-.|.-|++.+...++|+.--..+..++++.++|.-++
T Consensus 373 i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~C~ 438 (510)
T KOG3574|consen 373 ITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQCV 438 (510)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceeecc
Confidence 11 223333334445566778888899888899999999988888776666666677666666544
No 295
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=72.33 E-value=1.1e+02 Score=33.19 Aligned_cols=99 Identities=15% Similarity=0.155 Sum_probs=54.5
Q ss_pred hhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcccC-ccc-------------hHHHHHHHHHHHHHHHHHHHHH
Q 008185 166 KPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALFPV-AAK-------------ALPNLMACVLLSNLGASITEVA 231 (574)
Q Consensus 166 ~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~~~-~~~-------------~~~~l~~~~~l~~~g~~~~~~~ 231 (574)
+-+++.+++|.. +.+|++.+.++..+..+.+.+.-...+ ..+ .....++.-++.|++=+.....
T Consensus 296 g~~~~~l~~rir--~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~ 373 (461)
T KOG3098|consen 296 GLDFSILSKRIR--GFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQ 373 (461)
T ss_pred HHHHHHHhhhhh--hcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHH
Confidence 567888999864 556888877776654444443333211 110 1112233344455555554445
Q ss_pred HHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHH
Q 008185 232 KDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFG 267 (574)
Q Consensus 232 ~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~ig 267 (574)
....+++.. +++|..+.++...-..++..++-+..
T Consensus 374 ~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~ 408 (461)
T KOG3098|consen 374 RYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFS 408 (461)
T ss_pred HHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhh
Confidence 556667776 46666667766655556655544443
No 296
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=70.48 E-value=24 Score=36.82 Aligned_cols=71 Identities=20% Similarity=0.097 Sum_probs=46.0
Q ss_pred HHHHhhHHHH-HHHHHhhcCCC---hhHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHH
Q 008185 446 TLAQFKLLPF-SMLLARLCPQG---CEGSLTSFSASALCLSSIASGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLP 521 (574)
Q Consensus 446 ~~~~~~~~p~-~~l~~~~~p~~---~~gt~~gl~~~~~~lg~~lg~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~ 521 (574)
.+|...+=|. ..+.++-++++ .+.++|..+....|+|..++..+.+.+.+..|+ ...+.++++..+++
T Consensus 44 a~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~--------~~~f~i~~~~~~~~ 115 (372)
T PF00854_consen 44 AVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGW--------FLGFGIPAIGMLLA 115 (372)
T ss_dssp HHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-H--------HHHHHHHHHHHHHH
T ss_pred HhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccch--------hhhhhHHHHHHHHH
Confidence 3444334343 45566666544 567888899999999999988888887766553 34556666655555
Q ss_pred HHH
Q 008185 522 LIW 524 (574)
Q Consensus 522 l~~ 524 (574)
++.
T Consensus 116 ~~~ 118 (372)
T PF00854_consen 116 LIV 118 (372)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 297
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=67.56 E-value=2.1 Score=43.75 Aligned_cols=35 Identities=11% Similarity=0.012 Sum_probs=0.4
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHHHhHHHHHHHHH
Q 008185 456 SMLLARLCPQGCEGSLTSFSASALCLSSIASGFLG 490 (574)
Q Consensus 456 ~~l~~~~~p~~~~gt~~gl~~~~~~lg~~lg~~i~ 490 (574)
+.+..+..+++++..+-.+.+....+|..+|..++
T Consensus 270 m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 270 MMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp H----------------------------------
T ss_pred eeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666666555555555666666665554
No 298
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=60.06 E-value=1.3e+02 Score=32.57 Aligned_cols=28 Identities=11% Similarity=0.012 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCch
Q 008185 374 GMSRVIGQSMLLSLTVFYDRYWKKVPLR 401 (574)
Q Consensus 374 gl~~i~~~ig~lig~~l~~~l~~r~~~r 401 (574)
.+..+...+..++......++.+|++.+
T Consensus 48 ~~~~~~~~v~~l~~~~~~~~~~~~i~~~ 75 (437)
T TIGR00939 48 TYYTLASQLPSLLFNSLNLFLIFRIPVT 75 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 4455566666666666666777777753
No 299
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=51.25 E-value=2.5e+02 Score=29.87 Aligned_cols=25 Identities=12% Similarity=0.099 Sum_probs=15.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCC
Q 008185 507 LPVGIVIQFLAALLPLIWIHNVPMS 531 (574)
Q Consensus 507 l~~~~li~~~~~ll~l~~~~~vp~~ 531 (574)
....+.++.+..++|++.+...|+.
T Consensus 182 A~~yF~~s~~~~llC~i~y~~l~~l 206 (406)
T KOG1479|consen 182 ALIYFITSTVILLLCFVLYLVLPKL 206 (406)
T ss_pred eehhHHHHHHHHHHHHHHHHHhhcc
Confidence 3455666666666777766655544
No 300
>PHA03237 envelope glycoprotein M; Provisional
Probab=40.58 E-value=4.4e+02 Score=28.19 Aligned_cols=6 Identities=0% Similarity=0.175 Sum_probs=3.8
Q ss_pred chhHHH
Q 008185 113 NKQMLV 118 (574)
Q Consensus 113 ~~~~~~ 118 (574)
.|..|.
T Consensus 21 ~~r~W~ 26 (424)
T PHA03237 21 HWRLWL 26 (424)
T ss_pred hHHHHH
Confidence 666665
No 301
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=36.80 E-value=64 Score=22.98 Aligned_cols=33 Identities=21% Similarity=0.329 Sum_probs=18.3
Q ss_pred HHHHHHHHHhhccC----ChhHHHHHHHHHHHHHHHH
Q 008185 261 ILGNLFGGYFLLKT----PPTTMFLVFAVLLSLQLAI 293 (574)
Q Consensus 261 ~igp~igg~l~~~~----gwr~~f~i~ai~~~~~~~~ 293 (574)
++|.++|+++...+ ++.+.-++.+++.++.++.
T Consensus 5 iiGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~ 41 (48)
T PF04226_consen 5 IIGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLF 41 (48)
T ss_pred hHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHH
Confidence 34555555554433 3466666666666665554
No 302
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=30.56 E-value=1.9e+02 Score=20.53 Aligned_cols=16 Identities=44% Similarity=0.576 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHhhCc
Q 008185 484 IASGFLGVGLASLTGI 499 (574)
Q Consensus 484 ~lg~~i~g~l~~~~g~ 499 (574)
.+|+++++++.+.++.
T Consensus 5 iiGa~vGg~l~~~lg~ 20 (48)
T PF04226_consen 5 IIGAFVGGWLFGLLGI 20 (48)
T ss_pred hHHHHHHHHHHHHhcc
Confidence 5677888888888876
No 303
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=29.99 E-value=5.9e+02 Score=26.86 Aligned_cols=8 Identities=13% Similarity=-0.164 Sum_probs=3.4
Q ss_pred hHHHHHHH
Q 008185 468 EGSLTSFS 475 (574)
Q Consensus 468 ~gt~~gl~ 475 (574)
-|-..|.+
T Consensus 272 ~G~~~G~l 279 (374)
T PF01528_consen 272 FGPHLGTL 279 (374)
T ss_pred ccchHHHH
Confidence 34444443
No 304
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=29.53 E-value=2.5e+02 Score=23.50 Aligned_cols=18 Identities=22% Similarity=0.259 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHhhccCC
Q 008185 258 SGGILGNLFGGYFLLKTP 275 (574)
Q Consensus 258 ~G~~igp~igg~l~~~~g 275 (574)
+..++|..+|-++-+.++
T Consensus 54 ~pil~G~~lG~WLD~~~~ 71 (100)
T TIGR02230 54 IPTLLGVAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHHHHHHHhhcC
Confidence 344444455555555554
No 305
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=28.17 E-value=2.9e+02 Score=31.85 Aligned_cols=40 Identities=13% Similarity=-0.150 Sum_probs=19.1
Q ss_pred hhhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcc
Q 008185 164 VAKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALF 204 (574)
Q Consensus 164 ~~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~ 204 (574)
.++-+.+-++|.=..+.+|.|..+ ++.++++++.+...+.
T Consensus 38 ~lG~ia~~l~D~~~~~~~R~~~l~-it~~~f~i~sl~v~ll 77 (701)
T TIGR01667 38 CLGIIAAGLDDLDDRLTGRLKNLI-ITLSCFSIASFLVQLL 77 (701)
T ss_pred HHhhHhhccCCCCccHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 345566667775322222444444 4444444444444444
No 306
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=27.29 E-value=5.3e+02 Score=25.71 Aligned_cols=22 Identities=5% Similarity=-0.028 Sum_probs=12.9
Q ss_pred HHHHHHHHcchhhHHHHHHHHh
Q 008185 325 FSDLIATIGEESISYPLTWLVA 346 (574)
Q Consensus 325 ~~~~~~~~~~~~v~~~~l~~~l 346 (574)
.++....+..|.++......|+
T Consensus 197 ~r~~~t~ffspifikaFsltF~ 218 (294)
T KOG2881|consen 197 FRRKLTLFFSPIFIKAFSLTFL 218 (294)
T ss_pred hhHHHHHhccHHHHHHHHHHHH
Confidence 4455555666777666555554
No 307
>COG1288 Predicted membrane protein [Function unknown]
Probab=27.09 E-value=7.1e+02 Score=26.87 Aligned_cols=24 Identities=17% Similarity=0.054 Sum_probs=17.1
Q ss_pred hccCChhHHHHHHHHHHHHHHHHh
Q 008185 271 LLKTPPTTMFLVFAVLLSLQLAIS 294 (574)
Q Consensus 271 ~~~~gwr~~f~i~ai~~~~~~~~~ 294 (574)
.+-.+||.+.|+......+..+..
T Consensus 213 ~sG~~~Riv~~v~~~~~~i~y~~~ 236 (481)
T COG1288 213 LSGMGLRIVVWVVFTLISIIYVYW 236 (481)
T ss_pred cccchHHHHHHHHHHHHHHHHHHH
Confidence 345789999999876666555543
No 308
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=26.70 E-value=3.3e+02 Score=28.63 Aligned_cols=21 Identities=5% Similarity=-0.224 Sum_probs=14.3
Q ss_pred ccchhHHHHHHHHHHHhhhcc
Q 008185 111 NFNKQMLVLCGLGYWVQGFRC 131 (574)
Q Consensus 111 ~~~~~~~~~~~~~~f~~~~~~ 131 (574)
+++|++|+.+..+.+.|-..+
T Consensus 236 ll~WSlWwAl~scg~~QV~nY 256 (433)
T KOG3810|consen 236 LLKWSLWWALASCGYYQVTNY 256 (433)
T ss_pred hhhhHHHHHHhhchhHHHHHH
Confidence 448999987777666554443
No 309
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=26.37 E-value=1.4e+02 Score=29.96 Aligned_cols=117 Identities=18% Similarity=0.182 Sum_probs=54.7
Q ss_pred HHHHHHHhhhcc-chhhhhHHHHHHhcCCChhHHHHHHHHhhhhhhhhhhhee-eccccccCCCccchhHhHHHHHHHHH
Q 008185 120 CGLGYWVQGFRC-FPWLALNFHMAHNLSLHPSTLQLVQNSGNLPMVAKPLYGI-LSDALYIGGAHRIPYICIGVFLQILS 197 (574)
Q Consensus 120 ~~~~~f~~~~~~-~~~~~~~~~l~~~~~~s~~~~~l~~s~~~l~~~~~pl~G~-lsD~~~~~G~rRk~~l~i~~~~~~~~ 197 (574)
+.+.|+..-... +.-..+++++.++++.+.....++=.+..+ ....... .+| .|--|.|.|.|...|......|
T Consensus 206 iAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl---~SF~VS~v~~e-ipwngkrlKayYsaGgiiwifc 281 (412)
T KOG4830|consen 206 IALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYL---SSFSVSMVNSE-IPWNGKRLKAYYSAGGIIWIFC 281 (412)
T ss_pred HHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHH---hhhhHHhhccc-CCcCcceeeeeeecccHHHHHh
Confidence 444454433322 333334456666666665554443333222 2221111 222 3333446666766666665666
Q ss_pred HHHhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 008185 198 WGPLALFPVAAKALPNLMACVLLSNLGASITEVAKDALVAEYGQK 242 (574)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~ 242 (574)
.....+.+..... .++ +.-.+.|+..+...+....+.++...+
T Consensus 282 ga~ilLlpr~i~s-ymy-AisvfIGIAnAimlvtslsitavli~~ 324 (412)
T KOG4830|consen 282 GAVILLLPRGIKS-YMY-AISVFIGIANAIMLVTSLSITAVLINK 324 (412)
T ss_pred hhheeecccchHH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 5555555543322 222 223334566666655555556666544
No 310
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=24.99 E-value=5.6e+02 Score=28.75 Aligned_cols=63 Identities=11% Similarity=0.075 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHhhc
Q 008185 210 ALPNLMACVLLSNLGASITEVAKDALVAEYGQKNGIVGLQSYAFMAAASGGILGNLFGGYFLL 272 (574)
Q Consensus 210 ~~~~l~~~~~l~~~g~~~~~~~~~a~i~d~~~~~~rg~~~s~~~~~~~~G~~igp~igg~l~~ 272 (574)
+..|++-=.++.+++=.+..+...-+.-+-.|++.|..+++++....++|..+..++...+..
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~ 519 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQF 519 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444445555666666655555555666788899999999988888999988888865543
No 311
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=24.18 E-value=7.3e+02 Score=24.82 Aligned_cols=16 Identities=25% Similarity=0.011 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHHhhh
Q 008185 225 ASITEVAKDALVAEYG 240 (574)
Q Consensus 225 ~~~~~~~~~a~i~d~~ 240 (574)
+++..+...-++.|..
T Consensus 275 G~~lyv~~~ell~~~~ 290 (317)
T PF02535_consen 275 GTFLYVAFVELLPEEF 290 (317)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333334433
No 312
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=23.25 E-value=3.2e+02 Score=31.52 Aligned_cols=39 Identities=10% Similarity=-0.113 Sum_probs=17.7
Q ss_pred hhhhheeeccccccCCCccchhHhHHHHHHHHHHHHhhcc
Q 008185 165 AKPLYGILSDALYIGGAHRIPYICIGVFLQILSWGPLALF 204 (574)
Q Consensus 165 ~~pl~G~lsD~~~~~G~rRk~~l~i~~~~~~~~~~~~~~~ 204 (574)
++-+.+-++|.=..+.+|.|..+ ++.+.++++.+...+.
T Consensus 39 LG~ia~al~D~d~~~~~R~~~l~-~t~~~f~i~sl~v~ll 77 (704)
T TIGR01666 39 LGIIAAALVDLDDRLTGRLKNVI-FTLICFSIASFSVELL 77 (704)
T ss_pred HHHHhhccCCCCCcHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 34455667774322222344444 4444444444444443
No 313
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=23.13 E-value=4.3e+02 Score=22.17 Aligned_cols=23 Identities=9% Similarity=-0.328 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHhcCCchhHHH
Q 008185 383 MLLSLTVFYDRYWKKVPLRKLVG 405 (574)
Q Consensus 383 g~lig~~l~~~l~~r~~~r~ll~ 405 (574)
..++|.++-.++.++++....+.
T Consensus 55 pil~G~~lG~WLD~~~~t~~~~t 77 (100)
T TIGR02230 55 PTLLGVAVGIWLDRHYPSPFSWT 77 (100)
T ss_pred HHHHHHHHHHHHHhhcCCCcHHH
Confidence 34444444445556666655433
No 314
>PRK10263 DNA translocase FtsK; Provisional
Probab=21.39 E-value=3.1e+02 Score=33.78 Aligned_cols=205 Identities=13% Similarity=0.022 Sum_probs=0.0
Q ss_pred HHHHHcchhhHHHHHHHHhHhhhcccccccceeehccccCCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHH
Q 008185 328 LIATIGEESISYPLTWLVASVAMVPVLSGSMFCYQTQCLNINPS--VIGMSRVIGQSMLLSLTVFYDRYWKKVPLRKLVG 405 (574)
Q Consensus 328 ~~~~~~~~~v~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~s~~--~~gl~~i~~~ig~lig~~l~~~l~~r~~~r~ll~ 405 (574)
.++....+.+......+++ .+...+..++..|....-+|+.. ....-..++.+|..++-.++..+ |.-..++
T Consensus 13 ~~~~~~~rrL~E~~gIlLl--llAlfL~lALiSYsPsDPSwS~sa~~~~V~Nl~GiVGA~LAD~L~~LF----Gl~AYLL 86 (1355)
T PRK10263 13 LTKLSSGRRLLEALLILIV--LFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIF----GVMAYTI 86 (1355)
T ss_pred ccccchhHHHHHHHHHHHH--HHHHHHHHHHHhCCccCCcccccCcccccccccchHHHHHHHHHHHHH----hHHHHHH
Q ss_pred HHHHHHHHHHhHHHHhhhhhhcccCcCcceEEeehhHHHHHHHHhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHhHHHH
Q 008185 406 AVQILYASSLLLDLILVRQINLQFGVPNEVFVLCFAGLAETLAQFKLLPFSMLLARLCPQGCEGSLTSFSASALCLSSIA 485 (574)
Q Consensus 406 ~~~ll~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~p~~~l~~~~~p~~~~gt~~gl~~~~~~lg~~l 485 (574)
...++.....++ ..-...............++.+.++.....+........... ..|+.+
T Consensus 87 P~LL~~~a~~l~-----------R~r~~~~~l~~~~l~lRliGlLLLLLas~gLaa~~~~d~~~~---------~gGGII 146 (1355)
T PRK10263 87 PVIIVGGCWFAW-----------RHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYF---------ASGGVI 146 (1355)
T ss_pred HHHHHHHHHHHH-----------hccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccccccc---------cccchH
Q ss_pred HHHHHHHHHHhhCcccCCCCChhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhcCCCccCcccccceeEEEEEEEEec
Q 008185 486 SGFLGVGLASLTGITFGDYSSLPVGIVIQFLAALLPLIWIHNVPMSETIIEKGRKRGLSRRTRKNRRVGRVVIGSIFIYR 565 (574)
Q Consensus 486 g~~i~g~l~~~~g~~~~~~~~l~~~~li~~~~~ll~l~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 565 (574)
|..++..+...+|.... .+.+++++.+.+.++.-+-+..+.+.-+............+.+|.-+ |.
T Consensus 147 G~lLs~lL~~LfG~vGa---~LILLlllLIGLiLlTglSwlsIleriG~~v~~~~t~l~~~~r~~~~-----------~~ 212 (1355)
T PRK10263 147 GSLLSTTLQPLLHSSGG---TIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDT-----------WV 212 (1355)
T ss_pred HHHHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-----------cc
Q ss_pred cchhhhh
Q 008185 566 RERESEA 572 (574)
Q Consensus 566 ~~~~~~~ 572 (574)
||+|+|.
T Consensus 213 ~~~~~~~ 219 (1355)
T PRK10263 213 DEDEYED 219 (1355)
T ss_pred ccccccc
No 315
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=20.82 E-value=63 Score=29.66 Aligned_cols=10 Identities=20% Similarity=0.401 Sum_probs=7.1
Q ss_pred cceeEEEEEE
Q 008185 552 RVGRVVIGSI 561 (574)
Q Consensus 552 ~~g~~~~~~~ 561 (574)
+...++..++
T Consensus 135 ~~~~~Em~pL 144 (163)
T PF06679_consen 135 RAENVEMAPL 144 (163)
T ss_pred Ccccceeccc
Confidence 3467788877
Done!