Query 008186
Match_columns 574
No_of_seqs 343 out of 2827
Neff 8.0
Searched_HMMs 46136
Date Thu Mar 28 20:35:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008186.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008186hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02872 triacylglycerol lipas 100.0 3.8E-28 8.3E-33 257.0 24.2 327 80-572 44-391 (395)
2 PLN02679 hydrolase, alpha/beta 99.9 9.6E-26 2.1E-30 237.9 23.8 218 324-571 136-358 (360)
3 KOG2624 Triglyceride lipase-ch 99.9 1.1E-25 2.5E-30 235.1 20.4 328 80-571 48-399 (403)
4 PLN02824 hydrolase, alpha/beta 99.9 5.6E-25 1.2E-29 225.2 21.6 213 323-570 82-294 (294)
5 TIGR01836 PHA_synth_III_C poly 99.9 5.2E-24 1.1E-28 223.9 27.7 295 91-570 45-350 (350)
6 PLN02385 hydrolase; alpha/beta 99.9 3.8E-24 8.3E-29 224.8 23.1 201 325-572 138-347 (349)
7 TIGR02240 PHA_depoly_arom poly 99.9 4.6E-24 9.9E-29 216.6 21.9 197 324-572 72-268 (276)
8 PLN02298 hydrolase, alpha/beta 99.9 2.8E-23 6E-28 216.5 25.5 204 326-571 111-318 (330)
9 PRK00870 haloalkane dehalogena 99.9 3E-24 6.5E-29 220.9 17.0 68 494-570 233-301 (302)
10 PHA02857 monoglyceride lipase; 99.9 7.3E-23 1.6E-27 207.5 25.2 193 328-571 78-274 (276)
11 PLN02965 Probable pheophorbida 99.9 3.5E-23 7.6E-28 207.7 20.4 66 495-570 188-253 (255)
12 PRK03592 haloalkane dehalogena 99.9 9.6E-23 2.1E-27 208.8 20.5 214 324-571 74-290 (295)
13 COG2267 PldB Lysophospholipase 99.9 1.6E-22 3.5E-27 207.0 21.9 205 326-572 86-296 (298)
14 PLN03087 BODYGUARD 1 domain co 99.9 2.5E-22 5.5E-27 216.5 23.6 66 496-570 414-479 (481)
15 TIGR03343 biphenyl_bphD 2-hydr 99.9 3.8E-22 8.3E-27 202.3 23.4 193 332-568 89-281 (282)
16 KOG1455 Lysophospholipase [Lip 99.9 6.5E-23 1.4E-27 201.7 16.9 204 326-570 106-312 (313)
17 PLN02578 hydrolase 99.9 3.1E-22 6.7E-27 210.8 23.4 215 324-568 133-353 (354)
18 PRK10673 acyl-CoA esterase; Pr 99.9 5.3E-22 1.2E-26 198.1 23.2 66 495-570 190-255 (255)
19 PRK10749 lysophospholipase L2; 99.9 2.3E-22 5E-27 209.7 21.2 210 324-570 108-329 (330)
20 PLN02652 hydrolase; alpha/beta 99.9 6.7E-22 1.5E-26 210.1 24.6 200 326-572 187-389 (395)
21 TIGR01838 PHA_synth_I poly(R)- 99.9 8.7E-22 1.9E-26 214.2 25.3 277 91-548 171-459 (532)
22 PRK06489 hypothetical protein; 99.9 2.2E-21 4.7E-26 204.8 25.3 74 491-572 283-359 (360)
23 KOG4178 Soluble epoxide hydrol 99.9 2E-21 4.4E-26 194.1 22.4 217 323-571 93-321 (322)
24 TIGR02427 protocat_pcaD 3-oxoa 99.9 2.7E-21 5.8E-26 189.8 20.9 192 324-568 60-251 (251)
25 TIGR03611 RutD pyrimidine util 99.9 5.1E-21 1.1E-25 189.5 23.0 67 493-569 191-257 (257)
26 PRK10349 carboxylesterase BioH 99.9 5E-21 1.1E-25 191.8 20.5 69 491-569 187-255 (256)
27 PLN03084 alpha/beta hydrolase 99.9 9.3E-21 2E-25 200.3 23.4 202 323-569 177-383 (383)
28 TIGR03056 bchO_mg_che_rel puta 99.9 5.7E-21 1.2E-25 192.5 20.5 65 494-568 214-278 (278)
29 KOG4409 Predicted hydrolase/ac 99.9 1.4E-20 3E-25 188.5 21.5 215 332-570 144-364 (365)
30 PRK07868 acyl-CoA synthetase; 99.9 1.3E-20 2.9E-25 222.7 25.0 301 91-572 46-363 (994)
31 PRK07581 hypothetical protein; 99.9 3.2E-20 7E-25 194.2 25.0 71 491-571 266-337 (339)
32 PRK11126 2-succinyl-6-hydroxy- 99.9 7.7E-21 1.7E-25 188.3 19.3 190 327-569 50-241 (242)
33 TIGR01738 bioH putative pimelo 99.9 1.4E-20 2.9E-25 184.4 20.1 66 492-567 180-245 (245)
34 PRK08775 homoserine O-acetyltr 99.9 1.8E-20 3.9E-25 196.6 22.1 68 495-572 272-341 (343)
35 COG1647 Esterase/lipase [Gener 99.9 1.2E-20 2.6E-25 177.3 17.9 181 324-569 63-243 (243)
36 PF12697 Abhydrolase_6: Alpha/ 99.9 2.7E-21 5.9E-26 186.4 13.9 180 324-562 47-228 (228)
37 TIGR01250 pro_imino_pep_2 prol 99.9 6.1E-20 1.3E-24 184.5 22.4 66 492-568 223-288 (288)
38 PRK03204 haloalkane dehalogena 99.9 3.3E-20 7.2E-25 189.6 19.9 59 500-568 227-286 (286)
39 PRK13604 luxD acyl transferase 99.8 6.5E-20 1.4E-24 185.4 20.8 70 82-157 11-81 (307)
40 TIGR03695 menH_SHCHC 2-succiny 99.8 5.5E-20 1.2E-24 180.0 19.7 64 494-568 188-251 (251)
41 TIGR01839 PHA_synth_II poly(R) 99.8 1.3E-19 2.8E-24 195.2 23.5 266 91-536 198-476 (560)
42 KOG1454 Predicted hydrolase/ac 99.8 3.3E-20 7.3E-25 191.9 17.6 68 494-571 257-325 (326)
43 TIGR01607 PST-A Plasmodium sub 99.8 7.1E-20 1.5E-24 191.0 19.4 67 495-568 263-331 (332)
44 PLN02511 hydrolase 99.8 7.3E-20 1.6E-24 194.8 19.2 196 332-570 157-365 (388)
45 TIGR01392 homoserO_Ac_trn homo 99.8 1.1E-19 2.4E-24 191.2 19.9 69 492-568 280-351 (351)
46 PRK10985 putative hydrolase; P 99.8 1.8E-19 3.9E-24 187.4 20.9 199 332-572 115-322 (324)
47 PLN02211 methyl indole-3-aceta 99.8 1.7E-19 3.7E-24 183.1 18.8 63 496-569 206-269 (273)
48 PRK14875 acetoin dehydrogenase 99.8 4.7E-19 1E-23 187.1 21.9 187 332-570 185-371 (371)
49 TIGR01249 pro_imino_pep_1 prol 99.8 5.6E-19 1.2E-23 182.2 21.3 64 493-569 240-304 (306)
50 PLN02894 hydrolase, alpha/beta 99.8 2.1E-18 4.5E-23 184.5 26.2 71 491-571 316-386 (402)
51 PRK00175 metX homoserine O-ace 99.8 7.4E-19 1.6E-23 186.8 21.1 73 492-571 301-375 (379)
52 PLN02980 2-oxoglutarate decarb 99.8 4.6E-18 9.9E-23 208.3 24.0 206 324-572 1426-1641(1655)
53 PRK05077 frsA fermentation/res 99.8 9.8E-18 2.1E-22 179.6 22.8 62 497-571 352-413 (414)
54 TIGR03100 hydr1_PEP hydrolase, 99.8 5.8E-18 1.3E-22 172.0 19.9 51 332-390 83-134 (274)
55 PRK05855 short chain dehydroge 99.8 3.1E-18 6.8E-23 191.5 17.9 66 496-572 229-294 (582)
56 KOG2382 Predicted alpha/beta h 99.8 1E-17 2.3E-22 167.7 17.0 208 326-571 102-314 (315)
57 COG3243 PhaC Poly(3-hydroxyalk 99.7 7.7E-17 1.7E-21 165.2 19.5 288 94-569 93-398 (445)
58 PRK10566 esterase; Provisional 99.7 1.1E-16 2.3E-21 159.8 20.3 64 495-570 180-248 (249)
59 TIGR01849 PHB_depoly_PhaZ poly 99.7 1.7E-16 3.7E-21 166.7 21.5 231 323-570 149-406 (406)
60 COG0429 Predicted hydrolase of 99.7 7E-17 1.5E-21 161.3 15.0 199 331-572 131-342 (345)
61 KOG1838 Alpha/beta hydrolase [ 99.7 1.7E-15 3.7E-20 156.7 19.5 198 331-570 181-388 (409)
62 COG4757 Predicted alpha/beta h 99.7 7.3E-16 1.6E-20 145.6 12.8 200 323-567 80-280 (281)
63 PF12695 Abhydrolase_5: Alpha/ 99.7 1.2E-15 2.6E-20 138.5 13.5 41 111-156 1-41 (145)
64 PRK06765 homoserine O-acetyltr 99.7 1.9E-14 4.2E-19 152.6 24.1 220 324-569 141-387 (389)
65 PF00561 Abhydrolase_1: alpha/ 99.6 5.2E-16 1.1E-20 151.2 10.8 54 329-389 25-78 (230)
66 COG1506 DAP2 Dipeptidyl aminop 99.6 5.8E-14 1.3E-18 158.1 20.6 164 331-573 454-619 (620)
67 PRK11071 esterase YqiA; Provis 99.6 4.5E-14 9.7E-19 135.5 16.9 55 499-568 135-189 (190)
68 PF05448 AXE1: Acetyl xylan es 99.6 1.3E-13 2.9E-18 142.3 20.5 164 332-570 157-320 (320)
69 KOG1552 Predicted alpha/beta h 99.6 4.8E-14 1E-18 136.8 14.1 142 332-572 113-254 (258)
70 TIGR03101 hydr2_PEP hydrolase, 99.6 2.6E-14 5.7E-19 143.6 12.2 57 326-391 79-135 (266)
71 KOG4391 Predicted alpha/beta h 99.6 5.3E-14 1.2E-18 131.6 13.2 152 332-571 131-283 (300)
72 KOG2984 Predicted hydrolase [G 99.5 4.7E-14 1E-18 130.6 11.5 176 332-571 99-277 (277)
73 KOG2564 Predicted acetyltransf 99.5 7.5E-14 1.6E-18 135.5 11.6 71 80-158 48-119 (343)
74 PF00326 Peptidase_S9: Prolyl 99.5 6.3E-13 1.4E-17 129.6 17.5 163 331-572 45-211 (213)
75 TIGR01840 esterase_phb esteras 99.5 3.2E-13 7E-18 131.8 14.7 54 332-390 77-130 (212)
76 PRK11460 putative hydrolase; P 99.5 1.5E-12 3.3E-17 129.0 17.5 52 332-388 85-136 (232)
77 TIGR02821 fghA_ester_D S-formy 99.5 3.8E-12 8.3E-17 129.4 20.7 66 89-156 22-89 (275)
78 COG3458 Acetyl esterase (deace 99.5 7.6E-13 1.7E-17 128.2 13.7 159 332-571 158-318 (321)
79 COG0596 MhpC Predicted hydrola 99.4 1.3E-12 2.7E-17 127.3 14.6 67 493-568 214-280 (282)
80 PLN00021 chlorophyllase 99.4 2.5E-12 5.4E-17 132.6 17.4 53 94-153 39-91 (313)
81 TIGR00976 /NonD putative hydro 99.4 4.1E-12 8.8E-17 141.6 20.2 55 332-392 80-134 (550)
82 PLN02442 S-formylglutathione h 99.4 1.1E-11 2.4E-16 126.5 21.7 57 328-391 123-179 (283)
83 COG2021 MET2 Homoserine acetyl 99.4 1.6E-11 3.5E-16 125.1 22.1 220 331-569 129-367 (368)
84 KOG4667 Predicted esterase [Li 99.4 4.3E-12 9.4E-17 119.0 13.2 48 108-158 32-79 (269)
85 PF01738 DLH: Dienelactone hyd 99.4 1.3E-12 2.9E-17 128.0 10.4 194 262-570 16-217 (218)
86 COG0412 Dienelactone hydrolase 99.4 7.1E-12 1.5E-16 124.2 14.6 197 263-572 30-235 (236)
87 PF06500 DUF1100: Alpha/beta h 99.3 2.3E-11 5E-16 127.1 15.3 160 335-570 246-409 (411)
88 PRK10162 acetyl esterase; Prov 99.3 4.2E-10 9.2E-15 116.8 21.4 61 332-392 133-197 (318)
89 COG2945 Predicted hydrolase of 99.3 1.2E-10 2.6E-15 107.9 14.4 119 332-568 86-205 (210)
90 PF02273 Acyl_transf_2: Acyl t 99.2 8.5E-10 1.8E-14 105.8 16.9 70 83-158 5-75 (294)
91 COG3208 GrsT Predicted thioest 99.2 1E-09 2.3E-14 106.2 17.6 64 497-570 173-236 (244)
92 PF02230 Abhydrolase_2: Phosph 99.1 1.3E-09 2.9E-14 106.6 15.5 126 332-570 88-215 (216)
93 PF02129 Peptidase_S15: X-Pro 99.1 6.2E-10 1.3E-14 112.9 12.7 58 331-394 83-140 (272)
94 TIGR03230 lipo_lipase lipoprot 99.1 5E-10 1.1E-14 119.4 11.2 55 332-391 101-155 (442)
95 cd00707 Pancreat_lipase_like P 99.1 3.4E-10 7.3E-15 115.0 8.8 56 332-392 94-149 (275)
96 PRK10115 protease 2; Provision 99.0 6.4E-09 1.4E-13 118.4 19.0 56 332-392 506-561 (686)
97 PF08538 DUF1749: Protein of u 99.0 1E-09 2.2E-14 110.4 10.0 63 332-394 88-152 (303)
98 COG0400 Predicted esterase [Ge 99.0 1.3E-08 2.9E-13 98.2 16.7 123 332-570 81-205 (207)
99 PF06028 DUF915: Alpha/beta hy 99.0 5.8E-09 1.3E-13 104.0 13.7 59 332-392 87-145 (255)
100 PF06342 DUF1057: Alpha/beta h 99.0 4.4E-08 9.5E-13 96.8 19.2 45 110-159 36-80 (297)
101 PF03096 Ndr: Ndr family; Int 99.0 1.6E-07 3.5E-12 93.8 23.2 196 326-570 82-279 (283)
102 PRK05371 x-prolyl-dipeptidyl a 99.0 1.2E-08 2.6E-13 117.0 16.8 73 491-571 446-520 (767)
103 PF12146 Hydrolase_4: Putative 99.0 8.6E-10 1.9E-14 89.9 5.2 59 91-157 1-59 (79)
104 KOG3043 Predicted hydrolase re 98.9 5.4E-09 1.2E-13 99.3 10.7 170 275-571 55-241 (242)
105 PF11339 DUF3141: Protein of u 98.9 4.2E-07 9.2E-12 96.2 24.8 224 332-568 123-369 (581)
106 PF07859 Abhydrolase_3: alpha/ 98.9 5E-08 1.1E-12 94.7 15.1 60 332-392 50-112 (211)
107 PF10503 Esterase_phd: Esteras 98.9 7.1E-08 1.5E-12 94.1 16.0 53 332-389 79-131 (220)
108 PF00975 Thioesterase: Thioest 98.9 8.7E-08 1.9E-12 94.1 16.4 38 111-153 2-39 (229)
109 TIGR03502 lipase_Pla1_cef extr 98.8 9.6E-09 2.1E-13 116.1 10.2 44 110-158 450-493 (792)
110 PF12715 Abhydrolase_7: Abhydr 98.8 9.7E-09 2.1E-13 105.9 8.4 53 331-389 207-259 (390)
111 PF06821 Ser_hydrolase: Serine 98.7 1.2E-07 2.6E-12 89.3 12.5 42 498-547 112-153 (171)
112 PF10230 DUF2305: Uncharacteri 98.7 5.4E-07 1.2E-11 91.1 17.8 58 332-391 66-123 (266)
113 KOG2100 Dipeptidyl aminopeptid 98.7 1.5E-07 3.3E-12 107.7 15.0 154 332-570 590-747 (755)
114 KOG2931 Differentiation-relate 98.7 2.4E-06 5.2E-11 84.6 20.8 196 326-570 105-306 (326)
115 KOG1515 Arylacetamide deacetyl 98.7 1.2E-06 2.6E-11 90.7 19.5 61 332-392 144-209 (336)
116 PF12740 Chlorophyllase2: Chlo 98.7 5.4E-07 1.2E-11 89.3 15.9 43 349-391 90-132 (259)
117 PF05728 UPF0227: Uncharacteri 98.7 8.1E-07 1.8E-11 84.7 15.5 34 351-392 60-93 (187)
118 COG0657 Aes Esterase/lipase [L 98.6 2.2E-06 4.9E-11 88.6 18.0 61 332-393 131-194 (312)
119 PF03403 PAF-AH_p_II: Platelet 98.6 1.5E-06 3.3E-11 92.1 16.5 39 109-152 99-138 (379)
120 PF07819 PGAP1: PGAP1-like pro 98.6 2.5E-07 5.4E-12 91.1 9.6 58 332-391 64-124 (225)
121 PF09752 DUF2048: Uncharacteri 98.5 1E-05 2.2E-10 83.0 20.8 57 502-568 291-347 (348)
122 KOG4627 Kynurenine formamidase 98.5 1.3E-06 2.9E-11 81.9 12.6 149 332-567 119-268 (270)
123 PF06057 VirJ: Bacterial virul 98.5 8.9E-07 1.9E-11 83.3 11.3 56 331-389 51-106 (192)
124 COG2936 Predicted acyl esteras 98.5 2E-06 4.4E-11 93.4 15.4 55 332-392 107-161 (563)
125 PF08840 BAAT_C: BAAT / Acyl-C 98.5 4.3E-07 9.2E-12 88.8 9.4 55 332-392 4-58 (213)
126 KOG2565 Predicted hydrolases o 98.5 2.8E-06 6.2E-11 86.3 15.3 51 332-389 213-263 (469)
127 COG4814 Uncharacterized protei 98.5 1.7E-06 3.8E-11 83.8 13.0 61 328-391 117-177 (288)
128 PF01674 Lipase_2: Lipase (cla 98.4 7.5E-07 1.6E-11 86.9 7.7 36 332-370 60-95 (219)
129 KOG2281 Dipeptidyl aminopeptid 98.4 8.2E-06 1.8E-10 87.9 15.0 65 89-153 621-688 (867)
130 COG3571 Predicted hydrolase of 98.3 1E-05 2.2E-10 73.1 13.2 40 110-152 15-54 (213)
131 COG3545 Predicted esterase of 98.3 7.5E-06 1.6E-10 75.6 12.2 65 497-569 114-178 (181)
132 COG4188 Predicted dienelactone 98.3 3.8E-06 8.3E-11 86.4 11.0 57 90-151 48-108 (365)
133 KOG2551 Phospholipase/carboxyh 98.2 1.6E-05 3.6E-10 75.9 12.5 62 496-570 159-220 (230)
134 COG4099 Predicted peptidase [G 98.2 3.9E-05 8.4E-10 76.1 15.4 48 338-390 257-304 (387)
135 PF03959 FSH1: Serine hydrolas 98.2 3.8E-06 8.3E-11 82.0 8.5 40 496-536 157-196 (212)
136 PLN02733 phosphatidylcholine-s 98.2 4.8E-06 1E-10 89.6 8.7 58 332-392 146-203 (440)
137 PF03583 LIP: Secretory lipase 98.2 1.6E-05 3.5E-10 81.4 12.2 38 499-536 218-258 (290)
138 PRK10252 entF enterobactin syn 98.2 1.8E-05 3.9E-10 97.4 14.8 41 109-155 1068-1108(1296)
139 PF07224 Chlorophyllase: Chlor 98.1 1.9E-05 4.2E-10 77.1 11.0 94 275-392 58-159 (307)
140 PTZ00472 serine carboxypeptida 98.1 0.00038 8.2E-09 76.0 21.4 61 332-392 152-218 (462)
141 KOG3101 Esterase D [General fu 97.8 0.00012 2.6E-09 69.3 9.8 62 323-391 116-177 (283)
142 PF12048 DUF3530: Protein of u 97.8 0.0011 2.3E-08 68.6 17.8 67 79-151 61-127 (310)
143 KOG3975 Uncharacterized conser 97.8 0.0017 3.8E-08 63.1 17.5 55 332-390 93-147 (301)
144 PF00151 Lipase: Lipase; Inte 97.8 5.3E-05 1.1E-09 78.9 7.2 59 332-393 132-190 (331)
145 COG3509 LpqC Poly(3-hydroxybut 97.7 0.00023 5E-09 71.1 10.7 54 332-390 126-179 (312)
146 PF05990 DUF900: Alpha/beta hy 97.7 0.00016 3.4E-09 71.7 9.7 60 331-392 76-139 (233)
147 COG3319 Thioesterase domains o 97.7 0.00011 2.3E-09 73.5 8.1 53 335-391 52-104 (257)
148 PF00756 Esterase: Putative es 97.7 8.5E-05 1.8E-09 74.0 7.0 52 336-392 101-152 (251)
149 PRK04940 hypothetical protein; 97.7 0.0021 4.5E-08 60.5 15.3 34 351-392 61-94 (180)
150 PF05677 DUF818: Chlamydia CHL 97.6 0.0046 9.9E-08 63.3 18.0 40 332-371 196-236 (365)
151 KOG3847 Phospholipase A2 (plat 97.6 0.00043 9.4E-09 69.3 10.3 44 108-156 116-160 (399)
152 PRK10439 enterobactin/ferric e 97.6 0.0032 6.9E-08 67.7 17.4 49 337-390 273-323 (411)
153 COG4553 DepA Poly-beta-hydroxy 97.4 0.0019 4.1E-08 64.1 12.6 249 309-572 135-409 (415)
154 PF05577 Peptidase_S28: Serine 97.4 0.00051 1.1E-08 74.5 9.4 57 330-391 92-149 (434)
155 PLN02606 palmitoyl-protein thi 97.4 0.0024 5.2E-08 64.7 13.2 35 351-389 96-131 (306)
156 KOG4840 Predicted hydrolases o 97.4 0.0044 9.4E-08 59.4 13.8 55 332-391 91-145 (299)
157 PLN02633 palmitoyl protein thi 97.4 0.0026 5.6E-08 64.6 13.1 35 351-389 95-130 (314)
158 cd00312 Esterase_lipase Estera 97.4 0.0024 5.2E-08 70.4 14.0 58 331-391 154-214 (493)
159 PF05705 DUF829: Eukaryotic pr 97.4 0.0048 1E-07 61.3 14.7 64 497-567 175-240 (240)
160 PF04083 Abhydro_lipase: Parti 97.3 0.00024 5.2E-09 55.0 4.0 47 80-127 12-61 (63)
161 COG4782 Uncharacterized protei 97.0 0.0031 6.7E-08 64.9 9.4 62 329-392 172-236 (377)
162 PF02450 LCAT: Lecithin:choles 97.0 0.0015 3.2E-08 69.8 7.6 60 328-391 101-161 (389)
163 COG1075 LipA Predicted acetylt 97.0 0.0013 2.7E-08 68.9 6.9 55 332-391 111-165 (336)
164 PF05057 DUF676: Putative seri 97.0 0.001 2.2E-08 65.2 5.5 20 351-370 79-98 (217)
165 PF10142 PhoPQ_related: PhoPQ- 97.0 0.0076 1.6E-07 63.3 11.8 63 496-570 258-320 (367)
166 COG1073 Hydrolases of the alph 96.8 0.022 4.8E-07 57.2 13.7 73 494-571 225-298 (299)
167 COG1505 Serine proteases of th 96.7 0.013 2.8E-07 63.9 11.5 57 331-392 481-537 (648)
168 smart00824 PKS_TE Thioesterase 96.7 0.0046 1E-07 58.8 7.6 37 351-389 65-101 (212)
169 KOG1553 Predicted alpha/beta h 96.6 0.0075 1.6E-07 61.2 8.4 52 332-389 293-344 (517)
170 PLN02517 phosphatidylcholine-s 96.5 0.0051 1.1E-07 67.3 6.9 61 327-390 193-263 (642)
171 KOG2541 Palmitoyl protein thio 96.5 0.025 5.4E-07 55.9 10.6 35 351-389 93-127 (296)
172 PF11144 DUF2920: Protein of u 96.5 0.013 2.8E-07 61.7 9.2 58 326-388 158-217 (403)
173 PF08386 Abhydrolase_4: TAP-li 96.4 0.011 2.3E-07 50.8 7.2 62 499-570 33-94 (103)
174 KOG2237 Predicted serine prote 96.4 0.015 3.2E-07 63.7 9.2 57 332-393 531-587 (712)
175 cd00741 Lipase Lipase. Lipase 96.3 0.009 1.9E-07 54.9 6.2 56 332-390 12-67 (153)
176 COG1770 PtrB Protease II [Amin 96.0 0.21 4.7E-06 55.3 16.0 58 332-394 509-566 (682)
177 KOG1551 Uncharacterized conser 95.9 0.33 7.1E-06 48.0 15.1 60 503-572 309-368 (371)
178 KOG3724 Negative regulator of 95.9 0.016 3.4E-07 64.9 6.7 123 263-391 92-221 (973)
179 KOG2112 Lysophospholipase [Lip 95.9 0.051 1.1E-06 51.9 9.2 51 332-388 76-126 (206)
180 KOG3253 Predicted alpha/beta h 95.8 0.035 7.7E-07 60.4 8.8 41 495-536 299-339 (784)
181 KOG2182 Hydrolytic enzymes of 95.8 0.086 1.9E-06 56.5 11.4 57 330-391 151-208 (514)
182 KOG2369 Lecithin:cholesterol a 95.7 0.013 2.8E-07 62.3 5.2 61 327-390 162-225 (473)
183 COG2272 PnbA Carboxylesterase 95.7 0.18 3.9E-06 54.3 13.3 59 331-392 158-219 (491)
184 PF07082 DUF1350: Protein of u 95.6 0.036 7.9E-07 54.6 7.4 77 283-388 40-123 (250)
185 PF02089 Palm_thioest: Palmito 95.6 0.022 4.7E-07 57.4 6.0 35 351-389 81-115 (279)
186 COG3150 Predicted esterase [Ge 95.6 0.14 3.1E-06 47.2 10.4 48 334-391 45-92 (191)
187 COG0627 Predicted esterase [Ge 95.5 0.041 8.8E-07 56.9 7.8 65 323-393 126-190 (316)
188 PF11288 DUF3089: Protein of u 95.5 0.033 7.2E-07 53.7 6.7 41 330-371 76-116 (207)
189 PF01764 Lipase_3: Lipase (cla 95.4 0.044 9.6E-07 49.1 6.9 38 332-371 48-85 (140)
190 PF00135 COesterase: Carboxyle 95.3 0.051 1.1E-06 60.2 8.4 58 330-390 185-245 (535)
191 PF06850 PHB_depo_C: PHB de-po 95.2 0.019 4.1E-07 54.3 3.7 99 465-570 96-202 (202)
192 KOG2183 Prolylcarboxypeptidase 94.9 0.075 1.6E-06 55.6 7.2 56 330-390 147-202 (492)
193 PF10340 DUF2424: Protein of u 94.7 0.16 3.4E-06 53.4 9.4 60 332-393 179-238 (374)
194 cd00519 Lipase_3 Lipase (class 94.5 0.052 1.1E-06 53.4 5.1 38 332-371 112-149 (229)
195 PF11187 DUF2974: Protein of u 94.1 0.095 2.1E-06 51.5 5.8 55 332-390 69-123 (224)
196 COG2819 Predicted hydrolase of 93.7 0.1 2.2E-06 52.0 5.2 57 328-392 118-174 (264)
197 PF04301 DUF452: Protein of un 93.1 1.6 3.5E-05 42.5 12.2 33 351-390 58-90 (213)
198 PLN02408 phospholipase A1 92.7 0.18 3.9E-06 52.9 5.5 41 331-371 181-221 (365)
199 PLN02454 triacylglycerol lipas 92.6 0.2 4.3E-06 53.3 5.6 40 331-370 209-248 (414)
200 PF06259 Abhydrolase_8: Alpha/ 92.4 0.28 6.1E-06 46.3 5.9 54 331-390 91-144 (177)
201 PLN02571 triacylglycerol lipas 91.6 0.28 6E-06 52.3 5.4 39 332-370 208-246 (413)
202 COG3946 VirJ Type IV secretory 91.6 0.34 7.4E-06 50.8 5.8 38 331-370 309-346 (456)
203 PLN02162 triacylglycerol lipas 91.4 0.42 9.2E-06 51.4 6.4 35 333-369 263-297 (475)
204 PF01083 Cutinase: Cutinase; 90.8 0.64 1.4E-05 44.0 6.5 58 332-391 65-123 (179)
205 COG0412 Dienelactone hydrolase 90.4 0.41 8.8E-06 47.5 5.0 59 87-152 7-65 (236)
206 PLN02324 triacylglycerol lipas 90.4 0.42 9.2E-06 50.8 5.3 39 332-370 197-235 (415)
207 PLN02802 triacylglycerol lipas 89.7 0.5 1.1E-05 51.3 5.3 40 332-371 312-351 (509)
208 PLN00413 triacylglycerol lipas 89.1 0.63 1.4E-05 50.2 5.5 36 333-370 269-304 (479)
209 PLN02761 lipase class 3 family 88.8 0.65 1.4E-05 50.7 5.3 39 332-370 272-314 (527)
210 PF00450 Peptidase_S10: Serine 88.2 4.5 9.8E-05 43.2 11.6 61 500-568 330-414 (415)
211 PLN02934 triacylglycerol lipas 88.1 0.73 1.6E-05 50.1 5.2 37 332-370 305-341 (515)
212 PLN02753 triacylglycerol lipas 88.0 0.78 1.7E-05 50.1 5.3 39 332-370 291-332 (531)
213 PLN02310 triacylglycerol lipas 87.9 0.78 1.7E-05 48.8 5.2 39 332-370 189-229 (405)
214 KOG2521 Uncharacterized conser 87.8 8.2 0.00018 40.4 12.5 67 500-571 225-291 (350)
215 PLN02719 triacylglycerol lipas 87.3 0.89 1.9E-05 49.5 5.2 39 332-370 277-318 (518)
216 PLN03037 lipase class 3 family 85.8 1.2 2.6E-05 48.6 5.2 20 351-370 319-338 (525)
217 PLN02847 triacylglycerol lipas 85.6 1.2 2.7E-05 49.2 5.3 37 332-370 235-271 (633)
218 PF05277 DUF726: Protein of un 85.6 1.7 3.7E-05 45.4 6.2 45 348-392 218-262 (345)
219 KOG3967 Uncharacterized conser 85.2 7.7 0.00017 37.5 9.7 39 349-390 189-227 (297)
220 COG4287 PqaA PhoPQ-activated p 85.1 4.1 8.9E-05 42.4 8.4 63 496-570 325-387 (507)
221 PF01738 DLH: Dienelactone hyd 84.5 0.8 1.7E-05 44.4 3.0 51 96-153 3-53 (218)
222 KOG4540 Putative lipase essent 83.1 1.5 3.2E-05 43.9 4.1 42 327-371 256-297 (425)
223 COG5153 CVT17 Putative lipase 83.1 1.5 3.2E-05 43.9 4.1 42 327-371 256-297 (425)
224 KOG1516 Carboxylesterase and r 78.6 31 0.00067 38.5 13.4 56 331-389 173-231 (545)
225 PF08237 PE-PPE: PE-PPE domain 78.3 6.7 0.00014 38.6 7.0 67 324-391 23-90 (225)
226 COG2382 Fes Enterochelin ester 77.6 3.3 7.2E-05 42.1 4.6 55 334-393 159-215 (299)
227 PLN03016 sinapoylglucose-malat 74.2 24 0.00052 38.3 10.5 62 500-570 347-431 (433)
228 KOG4569 Predicted lipase [Lipi 74.0 4.5 9.8E-05 42.3 4.8 37 332-370 155-191 (336)
229 KOG2029 Uncharacterized conser 72.0 6.1 0.00013 43.7 5.2 61 305-370 486-546 (697)
230 TIGR03712 acc_sec_asp2 accesso 70.6 76 0.0016 34.7 12.9 44 327-371 335-378 (511)
231 KOG4372 Predicted alpha/beta h 67.0 3 6.5E-05 44.0 1.6 17 351-367 151-167 (405)
232 PF06441 EHN: Epoxide hydrolas 65.7 7.3 0.00016 33.8 3.5 32 90-124 76-107 (112)
233 COG2939 Carboxypeptidase C (ca 58.7 69 0.0015 35.1 10.0 61 332-394 177-240 (498)
234 PF07519 Tannase: Tannase and 57.2 12 0.00025 41.3 4.0 47 342-393 107-153 (474)
235 PLN02209 serine carboxypeptida 57.1 93 0.002 33.9 10.9 62 500-570 351-435 (437)
236 KOG2385 Uncharacterized conser 55.3 19 0.00042 39.2 5.1 46 349-394 446-491 (633)
237 PF00450 Peptidase_S10: Serine 54.6 22 0.00047 37.9 5.6 61 332-392 117-183 (415)
238 PF05576 Peptidase_S37: PS-10 46.2 30 0.00065 37.0 4.7 58 326-392 114-171 (448)
239 PLN02213 sinapoylglucose-malat 43.7 67 0.0014 33.3 7.0 62 500-570 233-317 (319)
240 KOG1202 Animal-type fatty acid 42.2 57 0.0012 39.5 6.4 52 335-391 2169-2220(2376)
241 PF07167 PhaC_N: Poly-beta-hyd 40.6 30 0.00065 32.4 3.4 45 92-137 128-172 (172)
242 PLN02209 serine carboxypeptida 39.3 80 0.0017 34.4 6.9 61 332-392 148-214 (437)
243 PLN03016 sinapoylglucose-malat 38.6 86 0.0019 34.1 7.1 60 332-391 146-211 (433)
244 PLN02213 sinapoylglucose-malat 36.1 1.1E+02 0.0023 31.7 7.1 60 332-391 32-97 (319)
245 PF07224 Chlorophyllase: Chlor 35.7 29 0.00063 34.8 2.6 37 110-151 46-83 (307)
246 KOG1282 Serine carboxypeptidas 34.8 1.7E+02 0.0036 32.1 8.4 63 500-570 363-448 (454)
247 KOG4388 Hormone-sensitive lipa 31.7 1E+02 0.0022 34.4 6.0 26 346-371 465-490 (880)
248 COG4947 Uncharacterized protei 30.7 46 0.00099 31.3 2.8 36 351-391 102-137 (227)
249 PF07519 Tannase: Tannase and 30.1 82 0.0018 34.7 5.3 66 500-571 353-428 (474)
250 KOG1209 1-Acyl dihydroxyaceton 28.5 52 0.0011 32.1 2.9 35 109-149 6-40 (289)
251 PRK11460 putative hydrolase; P 23.9 80 0.0017 30.9 3.5 45 108-154 147-191 (232)
252 COG2240 PdxK Pyridoxal/pyridox 22.4 1.3E+02 0.0029 30.5 4.6 74 133-243 20-101 (281)
253 PF00326 Peptidase_S9: Prolyl 22.3 48 0.001 31.6 1.5 45 108-154 143-187 (213)
254 COG1506 DAP2 Dipeptidyl aminop 21.8 49 0.0011 37.7 1.7 59 96-156 538-596 (620)
255 PHA02857 monoglyceride lipase; 20.9 1.4E+02 0.0029 29.5 4.5 26 276-304 41-66 (276)
256 KOG1282 Serine carboxypeptidas 20.8 2E+02 0.0043 31.5 5.9 41 81-122 45-86 (454)
257 PF05724 TPMT: Thiopurine S-me 20.6 89 0.0019 30.5 3.0 28 112-149 40-67 (218)
No 1
>PLN02872 triacylglycerol lipase
Probab=99.96 E-value=3.8e-28 Score=256.96 Aligned_cols=327 Identities=20% Similarity=0.260 Sum_probs=224.0
Q ss_pred cccceeeecCCCceEEEEEeCCCCC--CCCCCCcEEEecccccCceeeecC-CCCcHHHHhhhCCceEEEEeccCCcccC
Q 008186 80 DELHYVSVANCDWRLALWRYNPPPQ--APTRNHPLLLLSGVGTNAIGYDLS-PGSSFARYMAGQGFDTWILEVRGAGLSV 156 (574)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~~p~~~--~~~~~~p~~llhG~~~~~~~~~~~-~~~~~~~~l~~~g~~v~~~d~rg~G~S~ 156 (574)
-|.|+|.++ ||+.|.++|+.+... .+..++||+|+||++.++..|... +..+++..|+++||+||++|+||+|.|.
T Consensus 44 ~e~h~v~T~-DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~ 122 (395)
T PLN02872 44 CTEHTIQTK-DGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSY 122 (395)
T ss_pred ceEEEEECC-CCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccccc
Confidence 478999997 999999999964321 112356899999999999999764 5568999999999999999999999886
Q ss_pred CCCCchhhhhhcccchhHHHHhhccCCcCCCccccccccccccccchhhhhHHHHHHhhhhhhccccccccchhhhhhhH
Q 008186 157 RGSNLKEAQQSAHGVSEQMEAVANNSKISPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERLSGFLSENQSKIMSAKL 236 (574)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (574)
+.......
T Consensus 123 gh~~~~~~------------------------------------------------------------------------ 130 (395)
T PLN02872 123 GHVTLSEK------------------------------------------------------------------------ 130 (395)
T ss_pred CCCCCCcc------------------------------------------------------------------------
Confidence 54311000
Q ss_pred HHHHhhhhcccccchhhhHHhhhhhhhHhhhhhhhHHHHHHHhHHHHHHHHhcCcEEeccccchhhhhcccchhHHhhcc
Q 008186 237 FDQISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQL 316 (574)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~Gy~vi~pdl~~~~~~~~~~~~~~~~~~ 316 (574)
T Consensus 131 -------------------------------------------------------------------------------- 130 (395)
T PLN02872 131 -------------------------------------------------------------------------------- 130 (395)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeccCCCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCch
Q 008186 317 DLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSK 396 (574)
Q Consensus 317 ~~~~~~d~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~ 396 (574)
....|+|++++++..|+.++|+++....+ .++++|||||||.+++.++.+ + ...+.|+.+++++|........
T Consensus 131 -~~~fw~~s~~e~a~~Dl~a~id~i~~~~~---~~v~~VGhS~Gg~~~~~~~~~-p--~~~~~v~~~~~l~P~~~~~~~~ 203 (395)
T PLN02872 131 -DKEFWDWSWQELALYDLAEMIHYVYSITN---SKIFIVGHSQGTIMSLAALTQ-P--NVVEMVEAAALLCPISYLDHVT 203 (395)
T ss_pred -chhccCCcHHHHHHHHHHHHHHHHHhccC---CceEEEEECHHHHHHHHHhhC-h--HHHHHHHHHHHhcchhhhccCC
Confidence 00136788999988999999999976543 389999999999999966643 0 0124688999999987654433
Q ss_pred hHH-Hhhcc-ccC-hhhhcCCC-ccchHhHHHHhCCCCCCch-hHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHH
Q 008186 397 STL-KLLLP-LAD-PAQALNVP-VVPLGALLTAAYPLSSSPP-YVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLI 471 (574)
Q Consensus 397 ~~l-~~~~~-~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (574)
..+ ..+.. ... ....++.. ..+....+..+........ .....+..+.+.....+...+..+........+.+.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~ 283 (395)
T PLN02872 204 APLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVKNL 283 (395)
T ss_pred CHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHHHH
Confidence 332 11111 000 01112221 1122222221111111100 0112222222222335666666666666677889999
Q ss_pred HHHHHHHHcCCcccCCCcc-----cc------ccccCCC--CCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeC
Q 008186 472 LQLTTAFREGGLRDRGGKF-----FY------KDHIHKC--NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGE 538 (574)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~-----~~------~~~l~~I--~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~ 538 (574)
.+|.+.++.+.|..++-.. .| .-.+.+| ++|+++++|++|.+++++.++++.+.+++. .+++.+
T Consensus 284 ~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~-~~l~~l-- 360 (395)
T PLN02872 284 RHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSK-PELLYL-- 360 (395)
T ss_pred HHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCc-cEEEEc--
Confidence 9999999999998875321 11 1167778 579999999999999999999999999973 366665
Q ss_pred CCCCCCCcccccccccchhhHHHHHHHHHhhhcC
Q 008186 539 PSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 572 (574)
Q Consensus 539 ~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~~~ 572 (574)
++++|.+|+++.+++++|++.|++||+++..
T Consensus 361 ---~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 361 ---ENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred ---CCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 8899999999999999999999999997654
No 2
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=9.6e-26 Score=237.88 Aligned_cols=218 Identities=16% Similarity=0.157 Sum_probs=117.3
Q ss_pred CCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhc
Q 008186 324 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLL 403 (574)
Q Consensus 324 ~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~ 403 (574)
|++++++ +|+.++++.+... +++||||||||.+++.++..+ .|++|+++|++++...............
T Consensus 136 ~~~~~~a-~~l~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~----~P~rV~~LVLi~~~~~~~~~~~~~~~~~ 204 (360)
T PLN02679 136 YTMETWA-ELILDFLEEVVQK------PTVLIGNSVGSLACVIAASES----TRDLVRGLVLLNCAGGMNNKAVVDDWRI 204 (360)
T ss_pred ccHHHHH-HHHHHHHHHhcCC------CeEEEEECHHHHHHHHHHHhc----ChhhcCEEEEECCccccccccccchHHH
Confidence 4556666 8888888876433 899999999999999888742 1889999999998653321110000000
Q ss_pred cccChhhhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCc
Q 008186 404 PLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGL 483 (574)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (574)
....+..................+........+..++...+......+++....+.. ..... .....+...+. +.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~-~~- 279 (360)
T PLN02679 205 KLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRG-PADDE--GALDAFVSIVT-GP- 279 (360)
T ss_pred hhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHh-hccCC--ChHHHHHHHHh-cC-
Confidence 000000000000000000000111111111122222222222222233333332211 11111 11112222221 10
Q ss_pred ccCCCccccccccCCCCCcEEEEEeCCCCCCCHHH-----HHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhh
Q 008186 484 RDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEA-----VEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQ 558 (574)
Q Consensus 484 ~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~-----~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~ 558 (574)
...+....+.+|++|||+|+|++|.++|++. ...+.+.+|+. +++++ ++++|+.|.+ .|++
T Consensus 280 ----~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~--~l~~i--~~aGH~~~~E------~Pe~ 345 (360)
T PLN02679 280 ----PGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNV--TLYVL--EGVGHCPHDD------RPDL 345 (360)
T ss_pred ----CCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCce--EEEEc--CCCCCCcccc------CHHH
Confidence 0112235678999999999999999998863 34566678876 88888 7888888876 8999
Q ss_pred HHHHHHHHHhhhc
Q 008186 559 VYPCIVQFLGRYD 571 (574)
Q Consensus 559 v~~~Il~FL~~~~ 571 (574)
+++.|.+||++..
T Consensus 346 ~~~~I~~FL~~~~ 358 (360)
T PLN02679 346 VHEKLLPWLAQLP 358 (360)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999998754
No 3
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.94 E-value=1.1e-25 Score=235.09 Aligned_cols=328 Identities=23% Similarity=0.337 Sum_probs=231.4
Q ss_pred cccceeeecCCCceEEEEEeCCCCCCCCCCCcEEEecccccCceeeecC-CCCcHHHHhhhCCceEEEEeccCCcccCCC
Q 008186 80 DELHYVSVANCDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLS-PGSSFARYMAGQGFDTWILEVRGAGLSVRG 158 (574)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~-~~~~~~~~l~~~g~~v~~~d~rg~G~S~~~ 158 (574)
-|.|.|.+. ||+-|.++|+...+ ..++||+|.||+..++..|... |..++|..|+++|||||.-+.||.-.|.+.
T Consensus 48 ~E~h~V~T~-DgYiL~lhRIp~~~---~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h 123 (403)
T KOG2624|consen 48 VEEHEVTTE-DGYILTLHRIPRGK---KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKH 123 (403)
T ss_pred eEEEEEEcc-CCeEEEEeeecCCC---CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhh
Confidence 478999988 99999999986654 3568899999999999999987 788999999999999999999999999876
Q ss_pred CCchhhhhhcccchhHHHHhhccCCcCCCccccccccccccccchhhhhHHHHHHhhhhhhccccccccchhhhhhhHHH
Q 008186 159 SNLKEAQQSAHGVSEQMEAVANNSKISPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERLSGFLSENQSKIMSAKLFD 238 (574)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (574)
-...
T Consensus 124 ~~l~---------------------------------------------------------------------------- 127 (403)
T KOG2624|consen 124 KKLS---------------------------------------------------------------------------- 127 (403)
T ss_pred cccC----------------------------------------------------------------------------
Confidence 3110
Q ss_pred HHhhhhcccccchhhhHHhhhhhhhHhhhhhhhHHHHHHHhHHHHHHHHhcCcEEeccccchhhhhcccchhHHhhcccc
Q 008186 239 QISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDL 318 (574)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~Gy~vi~pdl~~~~~~~~~~~~~~~~~~~~ 318 (574)
|. ..
T Consensus 128 ---------------------------------------------------------~~-------------------~~ 131 (403)
T KOG2624|consen 128 ---------------------------------------------------------PS-------------------SD 131 (403)
T ss_pred ---------------------------------------------------------Cc-------------------CC
Confidence 00 00
Q ss_pred eeccCCCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhH
Q 008186 319 IVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKST 398 (574)
Q Consensus 319 ~~~~d~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~ 398 (574)
...|+|+|++++..|++++||++...++.. +++.||||+|+...+.+++..+.. ..+|+.+++++|.+.+......
T Consensus 132 ~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~--kl~yvGHSQGtt~~fv~lS~~p~~--~~kI~~~~aLAP~~~~k~~~~~ 207 (403)
T KOG2624|consen 132 KEFWDFSWHEMGTYDLPAMIDYILEKTGQE--KLHYVGHSQGTTTFFVMLSERPEY--NKKIKSFIALAPAAFPKHIKSL 207 (403)
T ss_pred cceeecchhhhhhcCHHHHHHHHHHhcccc--ceEEEEEEccchhheehhcccchh--hhhhheeeeecchhhhcccccH
Confidence 136899999999999999999999998876 999999999999999998873111 3479999999998865533333
Q ss_pred HHhhcc-cc---Chh-hhcCC-CccchHhHHHHhCCCCCCchhHH-----HHHhhhhccc-ccCCHHHHHHHHhhcccCC
Q 008186 399 LKLLLP-LA---DPA-QALNV-PVVPLGALLTAAYPLSSSPPYVF-----SWLNNLISAE-DMMHPELLKKLVLNNFCTI 466 (574)
Q Consensus 399 l~~~~~-~~---~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~ 466 (574)
...... +. ... ..++. ..++...+.+.+.........+. ..+....+.. ..++......++.......
T Consensus 208 ~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~pagt 287 (403)
T KOG2624|consen 208 LNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHLPAGT 287 (403)
T ss_pred HHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccCCCCc
Confidence 322111 10 001 11121 23333333333322222211111 1111111111 1122222223344445567
Q ss_pred cHHHHHHHHHHHHcCCcccCCCccc-----c------ccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEE
Q 008186 467 PAKLILQLTTAFREGGLRDRGGKFF-----Y------KDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKV 535 (574)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~------~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~i 535 (574)
+.+...+|.+.+..+.|..++-... | .-.+.+|++|+.+.+|++|.++.++.+..+...+++......+
T Consensus 288 Svk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~~~~~ 367 (403)
T KOG2624|consen 288 SVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVIKYIV 367 (403)
T ss_pred cHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcccccccccc
Confidence 8899999999999999988744331 1 1267788999999999999999999999998888876432222
Q ss_pred EeCCCCCCCCcccccccccchhhHHHHHHHHHhhhc
Q 008186 536 FGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 571 (574)
Q Consensus 536 i~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~~ 571 (574)
..+++.|+||+++.+++++|++.|++.++..+
T Consensus 368 ----~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 368 ----PIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred ----cCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 24899999999999999999999999998654
No 4
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=5.6e-25 Score=225.22 Aligned_cols=213 Identities=17% Similarity=0.193 Sum_probs=120.2
Q ss_pred CCCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhh
Q 008186 323 DWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLL 402 (574)
Q Consensus 323 d~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~ 402 (574)
.|++++++ +|+.++|+.+... ++++|||||||.+++.+|.++ |++|+++|++++..............
T Consensus 82 ~~~~~~~a-~~l~~~l~~l~~~------~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lili~~~~~~~~~~~~~~~~ 149 (294)
T PLN02824 82 FYTFETWG-EQLNDFCSDVVGD------PAFVICNSVGGVVGLQAAVDA-----PELVRGVMLINISLRGLHIKKQPWLG 149 (294)
T ss_pred cCCHHHHH-HHHHHHHHHhcCC------CeEEEEeCHHHHHHHHHHHhC-----hhheeEEEEECCCcccccccccchhh
Confidence 46778887 9999999877433 899999999999999999997 99999999999754221100000000
Q ss_pred ccccChhhhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCC
Q 008186 403 LPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGG 482 (574)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (574)
.++........... ......+........+...+...+......+++.+..+..... .......+...+.
T Consensus 150 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--- 219 (294)
T PLN02824 150 RPFIKAFQNLLRET----AVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGL---EPGAVDVFLDFIS--- 219 (294)
T ss_pred hHHHHHHHHHHhch----hHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccC---CchHHHHHHHHhc---
Confidence 00000000000000 0000000000011111112221111111223333332221111 1111111111111
Q ss_pred cccCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHH
Q 008186 483 LRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPC 562 (574)
Q Consensus 483 ~~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~ 562 (574)
+ .......+.+.+|++|+|+|+|++|.++|.+.++.+.+.+++. +++++ ++++|+.|.+ .|++|.+.
T Consensus 220 ~---~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~ 286 (294)
T PLN02824 220 Y---SGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVE--DFIVL--PGVGHCPQDE------APELVNPL 286 (294)
T ss_pred c---ccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCcc--ceEEe--CCCCCChhhh------CHHHHHHH
Confidence 0 0111123457899999999999999999999999888887766 77888 7788888876 89999999
Q ss_pred HHHHHhhh
Q 008186 563 IVQFLGRY 570 (574)
Q Consensus 563 Il~FL~~~ 570 (574)
|.+|++++
T Consensus 287 i~~fl~~~ 294 (294)
T PLN02824 287 IESFVARH 294 (294)
T ss_pred HHHHHhcC
Confidence 99999874
No 5
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.93 E-value=5.2e-24 Score=223.91 Aligned_cols=295 Identities=19% Similarity=0.298 Sum_probs=190.2
Q ss_pred CceEEEEEeCCCCCCCCCCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCcccCCCCCchhhhhhccc
Q 008186 91 DWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHG 170 (574)
Q Consensus 91 ~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G~S~~~~~~~~~~~~~~~ 170 (574)
...+.+++|.|.... ..+.|||++||+..+...+|+.++.+++++|.++||+||++|+||+|.|...
T Consensus 45 ~~~~~l~~~~~~~~~-~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~------------ 111 (350)
T TIGR01836 45 EDKVVLYRYTPVKDN-THKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY------------ 111 (350)
T ss_pred cCcEEEEEecCCCCc-CCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc------------
Confidence 445778888776432 2456899999998888888988999999999999999999999999976542
Q ss_pred chhHHHHhhccCCcCCCccccccccccccccchhhhhHHHHHHhhhhhhccccccccchhhhhhhHHHHHhhhhcccccc
Q 008186 171 VSEQMEAVANNSKISPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERLSGFLSENQSKIMSAKLFDQISKLLEDSQLS 250 (574)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (574)
T Consensus 112 -------------------------------------------------------------------------------- 111 (350)
T TIGR01836 112 -------------------------------------------------------------------------------- 111 (350)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHhhhhhhhHhhhhhhhHHHHHHHhHHHHHHHHhcCcEEeccccchhhhhcccchhHHhhcccceeccCCCccchh
Q 008186 251 EGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYL 330 (574)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~Gy~vi~pdl~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~a 330 (574)
+++++|.
T Consensus 112 -------------------------------------------------------------------------~~~~d~~ 118 (350)
T TIGR01836 112 -------------------------------------------------------------------------LTLDDYI 118 (350)
T ss_pred -------------------------------------------------------------------------CCHHHHH
Confidence 2344666
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhh
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQ 410 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~ 410 (574)
.+|+.++++++++..+.+ +++++||||||.+++.++..+ +++++++|+++++.++..................
T Consensus 119 ~~~~~~~v~~l~~~~~~~--~i~lvGhS~GG~i~~~~~~~~-----~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~ 191 (350)
T TIGR01836 119 NGYIDKCVDYICRTSKLD--QISLLGICQGGTFSLCYAALY-----PDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDL 191 (350)
T ss_pred HHHHHHHHHHHHHHhCCC--cccEEEECHHHHHHHHHHHhC-----chheeeEEEeccccccCCCCchhhhhccccCHHH
Confidence 567999999999887665 899999999999999999886 7789999999998876543322211111110000
Q ss_pred hcC-CCccchHhHHHHhCCCCCCch-hHHHHHhhhhcccccCCHHHHHHHHh-----hcccCCcHHHHHHHHHHH-HcCC
Q 008186 411 ALN-VPVVPLGALLTAAYPLSSSPP-YVFSWLNNLISAEDMMHPELLKKLVL-----NNFCTIPAKLILQLTTAF-REGG 482 (574)
Q Consensus 411 ~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~ 482 (574)
... ...++. .+....+....... .+..++.... ...+++.+..+.. ......+...+.++...+ ....
T Consensus 192 ~~~~~~~~p~-~~~~~~f~~l~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~ 267 (350)
T TIGR01836 192 AVDTMGNIPG-ELLNLTFLMLKPFSLGYQKYVNLVD---ILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNG 267 (350)
T ss_pred HHHhcCCCCH-HHHHHHHHhcCcchhhhHHHHHHHH---hcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCc
Confidence 000 000111 11111111111100 1111111000 0113333332211 112234445555554332 2222
Q ss_pred cccCCCccc---cccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhH
Q 008186 483 LRDRGGKFF---YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQV 559 (574)
Q Consensus 483 ~~~~~~~~~---~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v 559 (574)
+.. +.+. ....+.+|++|+++++|++|.++|++.++.+.+.+++..++++++ ..+|.+++.+.+.++++
T Consensus 268 l~~--g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~------~~gH~~~~~~~~~~~~v 339 (350)
T TIGR01836 268 LIN--GEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSF------PGGHIGIYVSGKAQKEV 339 (350)
T ss_pred ccC--CeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEc------CCCCEEEEECchhHhhh
Confidence 221 1211 123577899999999999999999999999999998766677765 36898888888889999
Q ss_pred HHHHHHHHhhh
Q 008186 560 YPCIVQFLGRY 570 (574)
Q Consensus 560 ~~~Il~FL~~~ 570 (574)
++.|.+||+++
T Consensus 340 ~~~i~~wl~~~ 350 (350)
T TIGR01836 340 PPAIGKWLQAR 350 (350)
T ss_pred hHHHHHHHHhC
Confidence 99999999864
No 6
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.92 E-value=3.8e-24 Score=224.80 Aligned_cols=201 Identities=14% Similarity=0.187 Sum_probs=112.8
Q ss_pred CccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhcc
Q 008186 325 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLP 404 (574)
Q Consensus 325 s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~ 404 (574)
++++++ +|+.++++.+......+..+++|+||||||++++.++.++ |+++.++|+++|................
T Consensus 138 ~~~~~~-~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~-----p~~v~glVLi~p~~~~~~~~~~~~~~~~ 211 (349)
T PLN02385 138 SFDDLV-DDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQ-----PNAWDGAILVAPMCKIADDVVPPPLVLQ 211 (349)
T ss_pred CHHHHH-HHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhC-----cchhhheeEecccccccccccCchHHHH
Confidence 355665 8899999888654322234799999999999999999986 8899999999986543211000000000
Q ss_pred ccChhhhcCCCccchHhHHHHhCCCCC--CchhHHHHHhhhhcccccCCHH--HHHHHHhhccc-CCcHHHHHHHHHHHH
Q 008186 405 LADPAQALNVPVVPLGALLTAAYPLSS--SPPYVFSWLNNLISAEDMMHPE--LLKKLVLNNFC-TIPAKLILQLTTAFR 479 (574)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~ 479 (574)
+. .......+... ....+.. ..+. +.. ........... .........+....
T Consensus 212 ~~--------------~~~~~~~p~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 268 (349)
T PLN02385 212 IL--------------ILLANLLPKAKLVPQKDLAE---LAFR-----DLKKRKMAEYNVIAYKDKPRLRTAVELLRTT- 268 (349)
T ss_pred HH--------------HHHHHHCCCceecCCCcccc---cccc-----CHHHHHHhhcCcceeCCCcchHHHHHHHHHH-
Confidence 00 00000000000 0000000 0000 000 00000000000 00111111111110
Q ss_pred cCCcccCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchh--
Q 008186 480 EGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVE-- 557 (574)
Q Consensus 480 ~~~~~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe-- 557 (574)
.+....+.+|++|+|+|+|++|.++|++.++.+++.++..+++++++ ++++|+.+.+ .|+
T Consensus 269 ----------~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i--~~~gH~l~~e------~p~~~ 330 (349)
T PLN02385 269 ----------QEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLY--EDAYHSILEG------EPDEM 330 (349)
T ss_pred ----------HHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEe--CCCeeecccC------CChhh
Confidence 02234578899999999999999999999999999886544588888 6666666654 444
Q ss_pred --hHHHHHHHHHhhhcC
Q 008186 558 --QVYPCIVQFLGRYDS 572 (574)
Q Consensus 558 --~v~~~Il~FL~~~~~ 572 (574)
.|++.|++||+++.+
T Consensus 331 ~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 331 IFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 489999999998764
No 7
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.92 E-value=4.6e-24 Score=216.59 Aligned_cols=197 Identities=19% Similarity=0.236 Sum_probs=113.9
Q ss_pred CCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhc
Q 008186 324 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLL 403 (574)
Q Consensus 324 ~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~ 403 (574)
|++++++ +|+.++++++... +++||||||||.+++.+|.++ |++|+++|+++++..............
T Consensus 72 ~~~~~~~-~~~~~~i~~l~~~------~~~LvG~S~GG~va~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~ 139 (276)
T TIGR02240 72 YRFPGLA-KLAARMLDYLDYG------QVNAIGVSWGGALAQQFAHDY-----PERCKKLILAATAAGAVMVPGKPKVLM 139 (276)
T ss_pred CcHHHHH-HHHHHHHHHhCcC------ceEEEEECHHHHHHHHHHHHC-----HHHhhheEEeccCCccccCCCchhHHH
Confidence 4456666 8888998887433 899999999999999999996 899999999998754221110000000
Q ss_pred cccChhhhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCc
Q 008186 404 PLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGL 483 (574)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (574)
.+..... +....+.. .....++.... ..+++....................+....
T Consensus 140 ~~~~~~~-----------~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 195 (276)
T TIGR02240 140 MMASPRR-----------YIQPSHGI----HIAPDIYGGAF----RRDPELAMAHASKVRSGGKLGYYWQLFAGL----- 195 (276)
T ss_pred HhcCchh-----------hhcccccc----chhhhhcccee----eccchhhhhhhhhcccCCCchHHHHHHHHc-----
Confidence 0000000 00000000 00000110000 001111111111000000111111111100
Q ss_pred ccCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHH
Q 008186 484 RDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCI 563 (574)
Q Consensus 484 ~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~I 563 (574)
.....+.+.+|+||+|+|+|++|.++|++.++++.+.+|++ +++++ + ++|..|.+ .|+++++.|
T Consensus 196 -----~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~--~~~~i--~-~gH~~~~e------~p~~~~~~i 259 (276)
T TIGR02240 196 -----GWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNA--ELHII--D-DGHLFLIT------RAEAVAPII 259 (276)
T ss_pred -----CCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCC--EEEEE--c-CCCchhhc------cHHHHHHHH
Confidence 01112457899999999999999999999999999999987 77887 3 36776665 899999999
Q ss_pred HHHHhhhcC
Q 008186 564 VQFLGRYDS 572 (574)
Q Consensus 564 l~FL~~~~~ 572 (574)
.+|+++...
T Consensus 260 ~~fl~~~~~ 268 (276)
T TIGR02240 260 MKFLAEERQ 268 (276)
T ss_pred HHHHHHhhh
Confidence 999998654
No 8
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.92 E-value=2.8e-23 Score=216.48 Aligned_cols=204 Identities=14% Similarity=0.182 Sum_probs=111.2
Q ss_pred ccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccc
Q 008186 326 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPL 405 (574)
Q Consensus 326 ~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~ 405 (574)
++.++ +|+.+++++++.....+..+++|+||||||.+++.++.++ |++|+++|+++|...............
T Consensus 111 ~~~~~-~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~-- 182 (330)
T PLN02298 111 VDLVV-EDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLAN-----PEGFDGAVLVAPMCKISDKIRPPWPIP-- 182 (330)
T ss_pred HHHHH-HHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcC-----cccceeEEEecccccCCcccCCchHHH--
Confidence 44555 9999999999875322334799999999999999999885 788999999998754322100000000
Q ss_pred cChhhhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHh-hc--cc-CCcHHHHHHHHHHHHcC
Q 008186 406 ADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVL-NN--FC-TIPAKLILQLTTAFREG 481 (574)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~--~~-~~~~~~~~~~~~~~~~~ 481 (574)
....+.....+.....+. ...+... ..... ...+.. +. .. ...............
T Consensus 183 ------------~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 241 (330)
T PLN02298 183 ------------QILTFVARFLPTLAIVPT-ADLLEKS-----VKVPA-KKIIAKRNPMRYNGKPRLGTVVELLRVTD-- 241 (330)
T ss_pred ------------HHHHHHHHHCCCCccccC-CCccccc-----ccCHH-HHHHHHhCccccCCCccHHHHHHHHHHHH--
Confidence 000001111111000000 0000000 00000 000000 00 00 001111111111100
Q ss_pred CcccCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHH
Q 008186 482 GLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYP 561 (574)
Q Consensus 482 ~~~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~ 561 (574)
.....+.+|++|+|||+|++|.++|++.++.+++.++..+++++++ ++++|..+.+ ......+++.+
T Consensus 242 ---------~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~--~~a~H~~~~e--~pd~~~~~~~~ 308 (330)
T PLN02298 242 ---------YLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIY--DGMMHSLLFG--EPDENIEIVRR 308 (330)
T ss_pred ---------HHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEc--CCcEeeeecC--CCHHHHHHHHH
Confidence 1134578899999999999999999999999998886444588888 5555555432 00112357889
Q ss_pred HHHHHHhhhc
Q 008186 562 CIVQFLGRYD 571 (574)
Q Consensus 562 ~Il~FL~~~~ 571 (574)
.|.+||+++.
T Consensus 309 ~i~~fl~~~~ 318 (330)
T PLN02298 309 DILSWLNERC 318 (330)
T ss_pred HHHHHHHHhc
Confidence 9999999875
No 9
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.92 E-value=3e-24 Score=220.85 Aligned_cols=68 Identities=16% Similarity=0.235 Sum_probs=56.7
Q ss_pred cccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCc-eEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 008186 494 DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDL-VTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 494 ~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~-~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~ 570 (574)
..+.+|++|+++|+|++|.++|... +++.+.+++.. ..++++ ++++|+.|.+ .|+++++.|.+||+++
T Consensus 233 ~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i--~~~gH~~~~e------~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 233 AVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTI--KGAGHFLQED------SGEELAEAVLEFIRAT 301 (302)
T ss_pred HhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeee--cCCCccchhh------ChHHHHHHHHHHHhcC
Confidence 3578899999999999999999876 88999999762 236677 6778888776 8999999999999875
No 10
>PHA02857 monoglyceride lipase; Provisional
Probab=99.91 E-value=7.3e-23 Score=207.48 Aligned_cols=193 Identities=18% Similarity=0.173 Sum_probs=110.4
Q ss_pred chhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccC
Q 008186 328 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLAD 407 (574)
Q Consensus 328 ~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~ 407 (574)
+++ +|+.+.++.++...+. .+++++||||||.+++.++.++ |+.++++|+++|........ ....+.
T Consensus 78 ~~~-~d~~~~l~~~~~~~~~--~~~~lvG~S~GG~ia~~~a~~~-----p~~i~~lil~~p~~~~~~~~-~~~~~~---- 144 (276)
T PHA02857 78 VYV-RDVVQHVVTIKSTYPG--VPVFLLGHSMGATISILAAYKN-----PNLFTAMILMSPLVNAEAVP-RLNLLA---- 144 (276)
T ss_pred HHH-HHHHHHHHHHHhhCCC--CCEEEEEcCchHHHHHHHHHhC-----ccccceEEEecccccccccc-HHHHHH----
Confidence 444 7788888877665443 3899999999999999999886 78899999999865421110 000000
Q ss_pred hhhhcCCCccchHhHHHH-hCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhccc---CCcHHHHHHHHHHHHcCCc
Q 008186 408 PAQALNVPVVPLGALLTA-AYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFC---TIPAKLILQLTTAFREGGL 483 (574)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 483 (574)
..... .++..........++.. +.........+... ..............
T Consensus 145 -------------~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 198 (276)
T PHA02857 145 -------------AKLMGIFYPNKIVGKLCPESVSR--------DMDEVYKYQYDPLVNHEKIKAGFASQVLKAT----- 198 (276)
T ss_pred -------------HHHHHHhCCCCccCCCCHhhccC--------CHHHHHHHhcCCCccCCCccHHHHHHHHHHH-----
Confidence 00000 00000000000000000 00011111111100 01111111111110
Q ss_pred ccCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHH
Q 008186 484 RDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCI 563 (574)
Q Consensus 484 ~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~I 563 (574)
.+..+.+.++++|+|+|+|++|.++|++.++++.+.++. +++++++ ++++|..|.| ..+..+++++.+
T Consensus 199 ------~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~-~~~~~~~--~~~gH~~~~e---~~~~~~~~~~~~ 266 (276)
T PHA02857 199 ------NKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANC-NREIKIY--EGAKHHLHKE---TDEVKKSVMKEI 266 (276)
T ss_pred ------HHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccC-CceEEEe--CCCcccccCC---chhHHHHHHHHH
Confidence 012346788999999999999999999999999998754 3488888 6777777755 223368899999
Q ss_pred HHHHhhhc
Q 008186 564 VQFLGRYD 571 (574)
Q Consensus 564 l~FL~~~~ 571 (574)
.+||+.+.
T Consensus 267 ~~~l~~~~ 274 (276)
T PHA02857 267 ETWIFNRV 274 (276)
T ss_pred HHHHHHhc
Confidence 99999874
No 11
>PLN02965 Probable pheophorbidase
Probab=99.91 E-value=3.5e-23 Score=207.70 Aligned_cols=66 Identities=15% Similarity=0.239 Sum_probs=58.7
Q ss_pred ccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 008186 495 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 495 ~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~ 570 (574)
.+.++++|+++|+|++|.++|++..+.+.+.+|++ +++++ ++++|+.|.+ .|++|++.|.+|++..
T Consensus 188 ~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a--~~~~i--~~~GH~~~~e------~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 188 NPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPA--QTYVL--EDSDHSAFFS------VPTTLFQYLLQAVSSL 253 (255)
T ss_pred hhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcc--eEEEe--cCCCCchhhc------CHHHHHHHHHHHHHHh
Confidence 45679999999999999999999999999999988 77877 6778888876 9999999999998764
No 12
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.90 E-value=9.6e-23 Score=208.82 Aligned_cols=214 Identities=16% Similarity=0.160 Sum_probs=111.8
Q ss_pred CCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhc
Q 008186 324 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLL 403 (574)
Q Consensus 324 ~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~ 403 (574)
|++++++ +|+.++++.+... +++++||||||.+++.++.++ |++|+++|++++...............
T Consensus 74 ~~~~~~a-~dl~~ll~~l~~~------~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lil~~~~~~~~~~~~~~~~~~ 141 (295)
T PRK03592 74 YTFADHA-RYLDAWFDALGLD------DVVLVGHDWGSALGFDWAARH-----PDRVRGIAFMEAIVRPMTWDDFPPAVR 141 (295)
T ss_pred CCHHHHH-HHHHHHHHHhCCC------CeEEEEECHHHHHHHHHHHhC-----hhheeEEEEECCCCCCcchhhcchhHH
Confidence 4455666 8899998887433 899999999999999999997 999999999998433211100000000
Q ss_pred cccChhhhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCc
Q 008186 404 PLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGL 483 (574)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (574)
... ..+........ . ......++..++...+. ....++.+..+...............+...+.....
T Consensus 142 ~~~---~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (295)
T PRK03592 142 ELF---QALRSPGEGEE-----M--VLEENVFIERVLPGSIL--RPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGE 209 (295)
T ss_pred HHH---HHHhCcccccc-----c--ccchhhHHhhcccCccc--ccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCc
Confidence 000 00000000000 0 00000001111110000 012233332222111100001111111111100000
Q ss_pred cc-CCC-ccccccccCCCCCcEEEEEeCCCCCCCHHHHHHH-HHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHH
Q 008186 484 RD-RGG-KFFYKDHIHKCNIPILAIAGDQDLICPPEAVEET-VKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVY 560 (574)
Q Consensus 484 ~~-~~~-~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l-~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~ 560 (574)
.. ... ..++...+.+|++|+|+|+|++|.++++....++ .+.+++. +++++ ++++|+.|.+ .|++++
T Consensus 210 ~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~v~ 279 (295)
T PRK03592 210 PADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQL--EITVF--GAGLHFAQED------SPEEIG 279 (295)
T ss_pred chhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhc--ceeec--cCcchhhhhc------CHHHHH
Confidence 00 000 0012345788999999999999999955545454 4566766 77887 6777777775 899999
Q ss_pred HHHHHHHhhhc
Q 008186 561 PCIVQFLGRYD 571 (574)
Q Consensus 561 ~~Il~FL~~~~ 571 (574)
+.|.+|+++..
T Consensus 280 ~~i~~fl~~~~ 290 (295)
T PRK03592 280 AAIAAWLRRLR 290 (295)
T ss_pred HHHHHHHHHhc
Confidence 99999998765
No 13
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.90 E-value=1.6e-22 Score=206.98 Aligned_cols=205 Identities=20% Similarity=0.273 Sum_probs=129.6
Q ss_pred ccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCC--chhHH-Hhh
Q 008186 326 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS--SKSTL-KLL 402 (574)
Q Consensus 326 ~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~--~~~~l-~~~ 402 (574)
|.+|. .|+.++++.+..... ..+++++||||||.|++.++.++ +..+.++|+.+|...... ..... ...
T Consensus 86 f~~~~-~dl~~~~~~~~~~~~--~~p~~l~gHSmGg~Ia~~~~~~~-----~~~i~~~vLssP~~~l~~~~~~~~~~~~~ 157 (298)
T COG2267 86 FADYV-DDLDAFVETIAEPDP--GLPVFLLGHSMGGLIALLYLARY-----PPRIDGLVLSSPALGLGGAILRLILARLA 157 (298)
T ss_pred HHHHH-HHHHHHHHHHhccCC--CCCeEEEEeCcHHHHHHHHHHhC-----CccccEEEEECccccCChhHHHHHHHHHh
Confidence 44665 999999999877532 33999999999999999999997 789999999999887653 11010 111
Q ss_pred ccccChhhhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCC
Q 008186 403 LPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGG 482 (574)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (574)
....... .+.+.... . . ...........++.....+..+..+.........+...+....
T Consensus 158 ~~~~~~~----~p~~~~~~-~--------------~-~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~ 217 (298)
T COG2267 158 LKLLGRI----RPKLPVDS-N--------------L-LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGR 217 (298)
T ss_pred ccccccc----ccccccCc-c--------------c-ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhc
Confidence 1000000 00000000 0 0 0000000111255566666555544433333333333332221
Q ss_pred cccCCCccccccccCCCCCcEEEEEeCCCCCCC-HHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccch--hhH
Q 008186 483 LRDRGGKFFYKDHIHKCNIPILAIAGDQDLICP-PEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAV--EQV 559 (574)
Q Consensus 483 ~~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp-~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~p--e~v 559 (574)
........++++|+|+++|++|.+++ .+...++.+.....+++++++ +++.|..|.| ... +++
T Consensus 218 -------~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~--~g~~He~~~E-----~~~~r~~~ 283 (298)
T COG2267 218 -------VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVI--PGAYHELLNE-----PDRAREEV 283 (298)
T ss_pred -------ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEec--CCcchhhhcC-----cchHHHHH
Confidence 11234567889999999999999999 788888888877666688888 7888888876 245 899
Q ss_pred HHHHHHHHhhhcC
Q 008186 560 YPCIVQFLGRYDS 572 (574)
Q Consensus 560 ~~~Il~FL~~~~~ 572 (574)
.+.+.+|++++..
T Consensus 284 ~~~~~~~l~~~~~ 296 (298)
T COG2267 284 LKDILAWLAEALP 296 (298)
T ss_pred HHHHHHHHHhhcc
Confidence 9999999998764
No 14
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.90 E-value=2.5e-22 Score=216.46 Aligned_cols=66 Identities=14% Similarity=0.106 Sum_probs=55.3
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 008186 496 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 496 l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~ 570 (574)
..+|++|+|+|+|++|.++|++.++.+.+.+|++ +++++ ++++|..+. . +.|+++++.|.+|+...
T Consensus 414 ~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a--~l~vI--~~aGH~~~v---~--e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 414 RDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRA--RVKVI--DDKDHITIV---V--GRQKEFARELEEIWRRS 479 (481)
T ss_pred HHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCC--EEEEe--CCCCCcchh---h--cCHHHHHHHHHHHhhcc
Confidence 3478999999999999999999999999999987 88888 556555553 1 27899999999998753
No 15
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.90 E-value=3.8e-22 Score=202.34 Aligned_cols=193 Identities=17% Similarity=0.229 Sum_probs=109.7
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhhh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQA 411 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~~ 411 (574)
+|+.++++.+..+ +++++||||||.+++.++.++ |++++++|++++........ ... +.
T Consensus 89 ~~l~~~l~~l~~~------~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~------~~~--~~-- 147 (282)
T TIGR03343 89 RAVKGLMDALDIE------KAHLVGNSMGGATALNFALEY-----PDRIGKLILMGPGGLGPSLF------APM--PM-- 147 (282)
T ss_pred HHHHHHHHHcCCC------CeeEEEECchHHHHHHHHHhC-----hHhhceEEEECCCCCCcccc------ccC--ch--
Confidence 7777777776433 899999999999999999987 89999999998753211000 000 00
Q ss_pred cCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCccc
Q 008186 412 LNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFF 491 (574)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (574)
.....+.... .. .....+..++..........+.+......... ...+. ....+........+ ...+
T Consensus 148 -----~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~----~~~~ 214 (282)
T TIGR03343 148 -----EGIKLLFKLY-AE-PSYETLKQMLNVFLFDQSLITEELLQGRWENI-QRQPE-HLKNFLISSQKAPL----STWD 214 (282)
T ss_pred -----HHHHHHHHHh-cC-CCHHHHHHHHhhCccCcccCcHHHHHhHHHHh-hcCHH-HHHHHHHhcccccc----ccch
Confidence 0000000000 00 00001111111111111111222211111100 01111 11111111100001 1223
Q ss_pred cccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 008186 492 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 568 (574)
Q Consensus 492 ~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~ 568 (574)
....+.+|++|+|+++|++|.++|++.++++.+.+|+. +++++ ++++|+.|.+ .|+.+.+.|.+||+
T Consensus 215 ~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~--~~~~i--~~agH~~~~e------~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 215 VTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDA--QLHVF--SRCGHWAQWE------HADAFNRLVIDFLR 281 (282)
T ss_pred HHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCC--EEEEe--CCCCcCCccc------CHHHHHHHHHHHhh
Confidence 34568899999999999999999999999999999987 88888 7777887776 89999999999996
No 16
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.90 E-value=6.5e-23 Score=201.72 Aligned_cols=204 Identities=19% Similarity=0.246 Sum_probs=130.8
Q ss_pred ccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccc
Q 008186 326 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPL 405 (574)
Q Consensus 326 ~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~ 405 (574)
|+..+ +|+....+.++.+...+..+.+|+||||||++++.++.+. |...+++|+++|..........-..+..
T Consensus 106 ~d~~v-~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~-----p~~w~G~ilvaPmc~i~~~~kp~p~v~~- 178 (313)
T KOG1455|consen 106 FDLVV-DDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKD-----PNFWDGAILVAPMCKISEDTKPHPPVIS- 178 (313)
T ss_pred HHHHH-HHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhC-----CcccccceeeecccccCCccCCCcHHHH-
Confidence 33444 9999999988776555556899999999999999999974 8899999999987655442211100000
Q ss_pred cChhhhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCC---cHHHHHHHHHHHHcCC
Q 008186 406 ADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTI---PAKLILQLTTAFREGG 482 (574)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 482 (574)
....+..+.+..+.-+ ..........+++.......+..+.. ..++..++.+.-.
T Consensus 179 -------------~l~~l~~liP~wk~vp------~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~--- 236 (313)
T KOG1455|consen 179 -------------ILTLLSKLIPTWKIVP------TKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTA--- 236 (313)
T ss_pred -------------HHHHHHHhCCceeecC------CccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHH---
Confidence 0011111111110000 00000111224444444444444332 2233333333221
Q ss_pred cccCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHH
Q 008186 483 LRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPC 562 (574)
Q Consensus 483 ~~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~ 562 (574)
+..+++.++++|.+|+||++|.+++++.++.+++..+..++++.++ |+.-|..|.+ ...++.+.|...
T Consensus 237 --------~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlY--pGm~H~Ll~g--E~~en~e~Vf~D 304 (313)
T KOG1455|consen 237 --------DLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLY--PGMWHSLLSG--EPDENVEIVFGD 304 (313)
T ss_pred --------HHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceecc--ccHHHHhhcC--CCchhHHHHHHH
Confidence 3356789999999999999999999999999999999999999998 6666666641 234677899999
Q ss_pred HHHHHhhh
Q 008186 563 IVQFLGRY 570 (574)
Q Consensus 563 Il~FL~~~ 570 (574)
|++||+++
T Consensus 305 I~~Wl~~r 312 (313)
T KOG1455|consen 305 IISWLDER 312 (313)
T ss_pred HHHHHHhc
Confidence 99999875
No 17
>PLN02578 hydrolase
Probab=99.90 E-value=3.1e-22 Score=210.77 Aligned_cols=215 Identities=16% Similarity=0.235 Sum_probs=118.7
Q ss_pred CCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhc
Q 008186 324 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLL 403 (574)
Q Consensus 324 ~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~ 403 (574)
|+.+.++ +|+.++++.+..+ +++++||||||.+++.+|.++ |++++++|++++...+...........
T Consensus 133 ~~~~~~a-~~l~~~i~~~~~~------~~~lvG~S~Gg~ia~~~A~~~-----p~~v~~lvLv~~~~~~~~~~~~~~~~~ 200 (354)
T PLN02578 133 YDAMVWR-DQVADFVKEVVKE------PAVLVGNSLGGFTALSTAVGY-----PELVAGVALLNSAGQFGSESREKEEAI 200 (354)
T ss_pred cCHHHHH-HHHHHHHHHhccC------CeEEEEECHHHHHHHHHHHhC-----hHhcceEEEECCCcccccccccccccc
Confidence 4455665 7888888877543 899999999999999999997 999999999987654322111000000
Q ss_pred c-ccChhhhcCCCccchHhHHHHh-----CCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHH
Q 008186 404 P-LADPAQALNVPVVPLGALLTAA-----YPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTA 477 (574)
Q Consensus 404 ~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (574)
. .......... .+........ +........+...+...+......+...................+......
T Consensus 201 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (354)
T PLN02578 201 VVEETVLTRFVV--KPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSR 278 (354)
T ss_pred ccccchhhHHHh--HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHH
Confidence 0 0000000000 0000000000 000011111112122222211112222222221111111111222222211
Q ss_pred HHcCCcccCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchh
Q 008186 478 FREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVE 557 (574)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe 557 (574)
+.. ....++..+.++++++|+++|+|++|.++|.+.++.+.+.+|+. +++++ +++|+.|.+ .|+
T Consensus 279 ~~~-----~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a--~l~~i---~~GH~~~~e------~p~ 342 (354)
T PLN02578 279 FLF-----NQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDT--TLVNL---QAGHCPHDE------VPE 342 (354)
T ss_pred Hhc-----CCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC--EEEEe---CCCCCcccc------CHH
Confidence 110 01123344568899999999999999999999999999999987 77777 478888876 999
Q ss_pred hHHHHHHHHHh
Q 008186 558 QVYPCIVQFLG 568 (574)
Q Consensus 558 ~v~~~Il~FL~ 568 (574)
++++.|.+|++
T Consensus 343 ~~~~~I~~fl~ 353 (354)
T PLN02578 343 QVNKALLEWLS 353 (354)
T ss_pred HHHHHHHHHHh
Confidence 99999999986
No 18
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.90 E-value=5.3e-22 Score=198.09 Aligned_cols=66 Identities=18% Similarity=0.299 Sum_probs=57.2
Q ss_pred ccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 008186 495 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 495 ~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~ 570 (574)
.+.++++|+|+|+|++|.+++.+..+.+.+.+|+. +++++ ++++|+.+.+ .|+++.+.|.+||+++
T Consensus 190 ~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 190 KIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQA--RAHVI--AGAGHWVHAE------KPDAVLRAIRRYLNDK 255 (255)
T ss_pred ccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCc--EEEEe--CCCCCeeecc------CHHHHHHHHHHHHhcC
Confidence 46778999999999999999999999999999987 77777 6677766665 8999999999999864
No 19
>PRK10749 lysophospholipase L2; Provisional
Probab=99.90 E-value=2.3e-22 Score=209.71 Aligned_cols=210 Identities=16% Similarity=0.161 Sum_probs=112.2
Q ss_pred CCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCch--hHHHh
Q 008186 324 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSK--STLKL 401 (574)
Q Consensus 324 ~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~--~~l~~ 401 (574)
+++++++ +|+.++++.+....+.. +++++||||||.+++.++.++ |+.++++|+++|........ .....
T Consensus 108 ~~~~~~~-~d~~~~~~~~~~~~~~~--~~~l~GhSmGG~ia~~~a~~~-----p~~v~~lvl~~p~~~~~~~~~~~~~~~ 179 (330)
T PRK10749 108 ERFNDYV-DDLAAFWQQEIQPGPYR--KRYALAHSMGGAILTLFLQRH-----PGVFDAIALCAPMFGIVLPLPSWMARR 179 (330)
T ss_pred ccHHHHH-HHHHHHHHHHHhcCCCC--CeEEEEEcHHHHHHHHHHHhC-----CCCcceEEEECchhccCCCCCcHHHHH
Confidence 3466776 89999999876554333 899999999999999999986 88899999998865432111 00000
Q ss_pred hccccChhhhcCC-CccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHH----HHHHhhcccCCcHHHHHHHHH
Q 008186 402 LLPLADPAQALNV-PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELL----KKLVLNNFCTIPAKLILQLTT 476 (574)
Q Consensus 402 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 476 (574)
+............ .......+ .+. +....++ . .+++.. +.+............+..+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~l----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (330)
T PRK10749 180 ILNWAEGHPRIRDGYAIGTGRW----RPL----PFAINVL----T----HSRERYRRNLRFYADDPELRVGGPTYHWVRE 243 (330)
T ss_pred HHHHHHHhcCCCCcCCCCCCCC----CCC----CcCCCCC----C----CCHHHHHHHHHHHHhCCCcccCCCcHHHHHH
Confidence 0000000000000 00000000 000 0000000 0 011111 111111100000001111111
Q ss_pred HHHcCCcccCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCC-----CceEEEEEeCCCCCCCCcccccc
Q 008186 477 AFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPE-----DLVTYKVFGEPSGPHYAHYDLVG 551 (574)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~-----a~~~l~ii~~~~~~h~gH~d~l~ 551 (574)
.+.. .......+.++++|+|+|+|++|.+++++.++.+++.+++ .+++++++ ++++|..+.|
T Consensus 244 ~~~~--------~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~--~gagH~~~~E--- 310 (330)
T PRK10749 244 SILA--------GEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVI--KGAYHEILFE--- 310 (330)
T ss_pred HHHH--------HHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEe--CCCcchhhhC---
Confidence 1110 0011245678999999999999999999999989887743 23478888 6666666654
Q ss_pred cccchhhHHHHHHHHHhhh
Q 008186 552 GRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 552 ~~~~pe~v~~~Il~FL~~~ 570 (574)
.....+.+.+.|.+||+++
T Consensus 311 ~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 311 KDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CcHHHHHHHHHHHHHHhhc
Confidence 2223688999999999876
No 20
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.90 E-value=6.7e-22 Score=210.08 Aligned_cols=200 Identities=17% Similarity=0.217 Sum_probs=112.8
Q ss_pred ccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccc
Q 008186 326 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPL 405 (574)
Q Consensus 326 ~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~ 405 (574)
++.+. +|+.++++++....+. .+++++||||||.+++.++.. +. .+++++++|+.+|.............+..
T Consensus 187 ~~~~~-~Dl~~~l~~l~~~~~~--~~i~lvGhSmGG~ial~~a~~-p~--~~~~v~glVL~sP~l~~~~~~~~~~~~~~- 259 (395)
T PLN02652 187 LDYVV-EDTEAFLEKIRSENPG--VPCFLFGHSTGGAVVLKAASY-PS--IEDKLEGIVLTSPALRVKPAHPIVGAVAP- 259 (395)
T ss_pred HHHHH-HHHHHHHHHHHHhCCC--CCEEEEEECHHHHHHHHHHhc-cC--cccccceEEEECcccccccchHHHHHHHH-
Confidence 44555 9999999999876432 289999999999999987653 10 12479999999887654322111111100
Q ss_pred cChhhhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhccc---CCcHHHHHHHHHHHHcCC
Q 008186 406 ADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFC---TIPAKLILQLTTAFREGG 482 (574)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 482 (574)
+.....+...... ... .......++......+.+... ...............
T Consensus 260 ----------------l~~~~~p~~~~~~-----~~~-~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~--- 314 (395)
T PLN02652 260 ----------------IFSLVAPRFQFKG-----ANK-RGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISS--- 314 (395)
T ss_pred ----------------HHHHhCCCCcccC-----ccc-ccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHH---
Confidence 0010111000000 000 000000011111111111110 011111111111100
Q ss_pred cccCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHH
Q 008186 483 LRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPC 562 (574)
Q Consensus 483 ~~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~ 562 (574)
.....+.+|++|+|+++|++|.++|++.++++++.+++.+++++++ +++.|..+.+ ..++++++.
T Consensus 315 --------~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~--~ga~H~l~~e-----~~~e~v~~~ 379 (395)
T PLN02652 315 --------YLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLY--DGFLHDLLFE-----PEREEVGRD 379 (395)
T ss_pred --------HHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEE--CCCeEEeccC-----CCHHHHHHH
Confidence 1134578899999999999999999999999999887655688888 5555554443 468999999
Q ss_pred HHHHHhhhcC
Q 008186 563 IVQFLGRYDS 572 (574)
Q Consensus 563 Il~FL~~~~~ 572 (574)
|.+||+.+..
T Consensus 380 I~~FL~~~~~ 389 (395)
T PLN02652 380 IIDWMEKRLD 389 (395)
T ss_pred HHHHHHHHhh
Confidence 9999997653
No 21
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.89 E-value=8.7e-22 Score=214.25 Aligned_cols=277 Identities=19% Similarity=0.292 Sum_probs=184.2
Q ss_pred CceEEEEEeCCCCCCCCCCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCcccCCCCCchhhhhhccc
Q 008186 91 DWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHG 170 (574)
Q Consensus 91 ~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G~S~~~~~~~~~~~~~~~ 170 (574)
.-.+.+++|.|..+. ....|||++||+......||+.|+.|++++|.++||+||++|+||+|.|.+.
T Consensus 171 ~~~~eLi~Y~P~t~~-~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~------------ 237 (532)
T TIGR01838 171 NELFQLIQYEPTTET-VHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQAD------------ 237 (532)
T ss_pred CCcEEEEEeCCCCCc-CCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCccccc------------
Confidence 345778899887532 2568999999999999999999999999999999999999999999987653
Q ss_pred chhHHHHhhccCCcCCCccccccccccccccchhhhhHHHHHHhhhhhhccccccccchhhhhhhHHHHHhhhhcccccc
Q 008186 171 VSEQMEAVANNSKISPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERLSGFLSENQSKIMSAKLFDQISKLLEDSQLS 250 (574)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (574)
T Consensus 238 -------------------------------------------------------------------------------- 237 (532)
T TIGR01838 238 -------------------------------------------------------------------------------- 237 (532)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHhhhhhhhHhhhhhhhHHHHHHHhHHHHHHHHhcCcEEeccccchhhhhcccchhHHhhcccceeccCCCccchh
Q 008186 251 EGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYL 330 (574)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~Gy~vi~pdl~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~a 330 (574)
+++++|+
T Consensus 238 -------------------------------------------------------------------------~~~ddY~ 244 (532)
T TIGR01838 238 -------------------------------------------------------------------------KTFDDYI 244 (532)
T ss_pred -------------------------------------------------------------------------CChhhhH
Confidence 2244666
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHH----HHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhcccc
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYA----MLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLA 406 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~----~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~ 406 (574)
.+++.++|+.++..+|.+ +++++||||||.++.. +++.+ .+++|+++|++++++++..... +..+....
T Consensus 245 ~~~i~~al~~v~~~~g~~--kv~lvG~cmGGtl~a~ala~~aa~~----~~~rv~slvll~t~~Df~~~G~-l~~f~~~~ 317 (532)
T TIGR01838 245 RDGVIAALEVVEAITGEK--QVNCVGYCIGGTLLSTALAYLAARG----DDKRIKSATFFTTLLDFSDPGE-LGVFVDEE 317 (532)
T ss_pred HHHHHHHHHHHHHhcCCC--CeEEEEECcCcHHHHHHHHHHHHhC----CCCccceEEEEecCcCCCCcch-hhhhcCch
Confidence 677999999998887765 8999999999998633 33331 1567999999999998875432 22221111
Q ss_pred Ch---hhhcCCCccchHhHHHHhCCCCCCchhH-HHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHH-HHHHcC
Q 008186 407 DP---AQALNVPVVPLGALLTAAYPLSSSPPYV-FSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLT-TAFREG 481 (574)
Q Consensus 407 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 481 (574)
.. ..........-+..+...|...+....+ ..++..++...... ... ..+......+++.+...++. ..+..+
T Consensus 318 ~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~-~fd-ll~Wn~D~t~lP~~~~~~~lr~ly~~N 395 (532)
T TIGR01838 318 IVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPV-PFD-LLFWNSDSTNLPGKMHNFYLRNLYLQN 395 (532)
T ss_pred hHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCcc-chh-HHHHhccCccchHHHHHHHHHHHHhcC
Confidence 00 0111111122223344444444443332 22333333222111 111 11222234467888888877 445555
Q ss_pred CcccCCCcccc---ccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCccc
Q 008186 482 GLRDRGGKFFY---KDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYD 548 (574)
Q Consensus 482 ~~~~~~~~~~~---~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d 548 (574)
.+.. +.+.. ...+.+|++|+|+|+|++|.++|++.++.+.+.+++. ...++ ++++|..|.+
T Consensus 396 ~L~~--G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~--~~~vL--~~sGHi~~ie 459 (532)
T TIGR01838 396 ALTT--GGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGP--KTFVL--GESGHIAGVV 459 (532)
T ss_pred CCcC--CeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCC--EEEEE--CCCCCchHhh
Confidence 5542 33332 3588999999999999999999999999999999975 55566 5666666643
No 22
>PRK06489 hypothetical protein; Provisional
Probab=99.89 E-value=2.2e-21 Score=204.84 Aligned_cols=74 Identities=20% Similarity=0.268 Sum_probs=59.2
Q ss_pred ccccccCCCCCcEEEEEeCCCCCCCHHHH--HHHHHhCCCCceEEEEEeCCCC-CCCCcccccccccchhhHHHHHHHHH
Q 008186 491 FYKDHIHKCNIPILAIAGDQDLICPPEAV--EETVKLLPEDLVTYKVFGEPSG-PHYAHYDLVGGRMAVEQVYPCIVQFL 567 (574)
Q Consensus 491 ~~~~~l~~I~vPvLII~Ge~D~vvp~e~~--~~l~~~lp~a~~~l~ii~~~~~-~h~gH~d~l~~~~~pe~v~~~Il~FL 567 (574)
+..+.+.+|++|||+|+|++|.++|++.+ +.+.+.+|++ +++++ +++ .+++|.-+ +.|+++++.|.+||
T Consensus 283 d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a--~l~~i--~~a~~~~GH~~~----e~P~~~~~~i~~FL 354 (360)
T PRK06489 283 NPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHG--RLVLI--PASPETRGHGTT----GSAKFWKAYLAEFL 354 (360)
T ss_pred ChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCC--eEEEE--CCCCCCCCcccc----cCHHHHHHHHHHHH
Confidence 34567899999999999999999999865 7899999988 88888 553 12344321 28999999999999
Q ss_pred hhhcC
Q 008186 568 GRYDS 572 (574)
Q Consensus 568 ~~~~~ 572 (574)
+++.+
T Consensus 355 ~~~~~ 359 (360)
T PRK06489 355 AQVPK 359 (360)
T ss_pred Hhccc
Confidence 98765
No 23
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.89 E-value=2e-21 Score=194.11 Aligned_cols=217 Identities=17% Similarity=0.206 Sum_probs=118.7
Q ss_pred CCCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhh
Q 008186 323 DWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLL 402 (574)
Q Consensus 323 d~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~ 402 (574)
+||++.++ .|+.++|+.+..+ +++++||+||+++++.+|..+ |++|.++|+++.+.. .+........
T Consensus 93 ~Yt~~~l~-~di~~lld~Lg~~------k~~lvgHDwGaivaw~la~~~-----Perv~~lv~~nv~~~-~p~~~~~~~~ 159 (322)
T KOG4178|consen 93 EYTIDELV-GDIVALLDHLGLK------KAFLVGHDWGAIVAWRLALFY-----PERVDGLVTLNVPFP-NPKLKPLDSS 159 (322)
T ss_pred eeeHHHHH-HHHHHHHHHhccc------eeEEEeccchhHHHHHHHHhC-----hhhcceEEEecCCCC-Ccccchhhhh
Confidence 57788886 9999999999744 999999999999999999997 999999999987654 1111111111
Q ss_pred cc-ccChhh--hcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHH
Q 008186 403 LP-LADPAQ--ALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFR 479 (574)
Q Consensus 403 ~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (574)
.. +...+. .+..+..... .++..........+...-.......+. .-..+.+-......+.+...+.
T Consensus 160 ~~~f~~~~y~~~fQ~~~~~E~-----~~s~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~w~t~edi~~~~~~f~ 229 (322)
T KOG4178|consen 160 KAIFGKSYYICLFQEPGKPET-----ELSKDDTEMLVKTFRTRKTPGPLIVPK-----QPNENPLWLTEEDIAFYVSKFQ 229 (322)
T ss_pred ccccCccceeEeccccCcchh-----hhccchhHHhHHhhhccccCCccccCC-----CCCCccchhhHHHHHHHHhccc
Confidence 11 110000 0000000000 000000000000000000000000000 0000000011122222222232
Q ss_pred cCCcccCCCccc--------cccccCCCCCcEEEEEeCCCCCCCHH-HHHHHHHhCCCCceEEEEEeCCCCCCCCccccc
Q 008186 480 EGGLRDRGGKFF--------YKDHIHKCNIPILAIAGDQDLICPPE-AVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLV 550 (574)
Q Consensus 480 ~~~~~~~~~~~~--------~~~~l~~I~vPvLII~Ge~D~vvp~e-~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l 550 (574)
.+++....+.++ ....+.+|++|+++|+|+.|.+.+.. ..+.+.+.+|... +.+++ +|++|+.+.|
T Consensus 230 ~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~-~~vv~--~~~gH~vqqe-- 304 (322)
T KOG4178|consen 230 IDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLT-ERVVI--EGIGHFVQQE-- 304 (322)
T ss_pred cccccccchhhHHHhhCchhccccccccccceEEEEecCcccccchhHHHHHHHhhcccc-ceEEe--cCCccccccc--
Confidence 233332211110 12256789999999999999998876 5666777888753 44555 6788888876
Q ss_pred ccccchhhHHHHHHHHHhhhc
Q 008186 551 GGRMAVEQVYPCIVQFLGRYD 571 (574)
Q Consensus 551 ~~~~~pe~v~~~Il~FL~~~~ 571 (574)
.|++|++.|++|+++.+
T Consensus 305 ----~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 305 ----KPQEVNQAILGFINSFS 321 (322)
T ss_pred ----CHHHHHHHHHHHHHhhc
Confidence 99999999999999764
No 24
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.88 E-value=2.7e-21 Score=189.82 Aligned_cols=192 Identities=23% Similarity=0.346 Sum_probs=108.3
Q ss_pred CCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhc
Q 008186 324 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLL 403 (574)
Q Consensus 324 ~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~ 403 (574)
+++++++ +|+.++++.+... +++++||||||.+++.+|.++ |++++++|++++...............
T Consensus 60 ~~~~~~~-~~~~~~i~~~~~~------~v~liG~S~Gg~~a~~~a~~~-----p~~v~~li~~~~~~~~~~~~~~~~~~~ 127 (251)
T TIGR02427 60 YSIEDLA-DDVLALLDHLGIE------RAVFCGLSLGGLIAQGLAARR-----PDRVRALVLSNTAAKIGTPESWNARIA 127 (251)
T ss_pred CCHHHHH-HHHHHHHHHhCCC------ceEEEEeCchHHHHHHHHHHC-----HHHhHHHhhccCccccCchhhHHHHHh
Confidence 3445555 7777777766322 899999999999999999985 889999999987643322111100000
Q ss_pred cccChhhhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCc
Q 008186 404 PLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGL 483 (574)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (574)
.+.. . ........ .+..++...+.. ........+. ......+...+......+.
T Consensus 128 ~~~~----~-----~~~~~~~~---------~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---- 181 (251)
T TIGR02427 128 AVRA----E-----GLAALADA---------VLERWFTPGFRE---AHPARLDLYR-NMLVRQPPDGYAGCCAAIR---- 181 (251)
T ss_pred hhhh----c-----cHHHHHHH---------HHHHHccccccc---CChHHHHHHH-HHHHhcCHHHHHHHHHHHh----
Confidence 0000 0 00000000 000111000000 0111111110 0000111111111111111
Q ss_pred ccCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHH
Q 008186 484 RDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCI 563 (574)
Q Consensus 484 ~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~I 563 (574)
..+..+.+.++++|+++++|++|.++|.+....+.+.+++. +++++ ++++|..+.+ .|+++.+.|
T Consensus 182 -----~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~p~~~~~~i 246 (251)
T TIGR02427 182 -----DADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGA--RFAEI--RGAGHIPCVE------QPEAFNAAL 246 (251)
T ss_pred -----cccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCc--eEEEE--CCCCCccccc------ChHHHHHHH
Confidence 11234567889999999999999999999999999999876 77887 5666766654 789999999
Q ss_pred HHHHh
Q 008186 564 VQFLG 568 (574)
Q Consensus 564 l~FL~ 568 (574)
.+|++
T Consensus 247 ~~fl~ 251 (251)
T TIGR02427 247 RDFLR 251 (251)
T ss_pred HHHhC
Confidence 99984
No 25
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.88 E-value=5.1e-21 Score=189.50 Aligned_cols=67 Identities=22% Similarity=0.413 Sum_probs=56.6
Q ss_pred ccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 008186 493 KDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 569 (574)
Q Consensus 493 ~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~ 569 (574)
...+.++++|+++++|++|.++|++.++++.+.+++. +++++ ++++|..+.+ .|+++.+.|.+||+.
T Consensus 191 ~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 191 SARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNA--QLKLL--PYGGHASNVT------DPETFNRALLDFLKT 257 (257)
T ss_pred HHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCc--eEEEE--CCCCCCcccc------CHHHHHHHHHHHhcC
Confidence 4567889999999999999999999999999999987 77777 5566665554 899999999999963
No 26
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.87 E-value=5e-21 Score=191.82 Aligned_cols=69 Identities=19% Similarity=0.294 Sum_probs=60.4
Q ss_pred ccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 008186 491 FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 569 (574)
Q Consensus 491 ~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~ 569 (574)
+..+.+.+|++|+|+|+|++|.++|.+.++.+.+.++++ +++++ ++++|+.+.+ .|++|++.|.+|-++
T Consensus 187 ~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~--~~~~i--~~~gH~~~~e------~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 187 DLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHS--ESYIF--AKAAHAPFIS------HPAEFCHLLVALKQR 255 (256)
T ss_pred ccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCC--eEEEe--CCCCCCcccc------CHHHHHHHHHHHhcc
Confidence 345678899999999999999999999999999999988 88888 7888888876 999999999998653
No 27
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.87 E-value=9.3e-21 Score=200.28 Aligned_cols=202 Identities=13% Similarity=0.118 Sum_probs=111.7
Q ss_pred CCCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCc--hhHHH
Q 008186 323 DWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSS--KSTLK 400 (574)
Q Consensus 323 d~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~--~~~l~ 400 (574)
+|++++++ +|+.++++.+... +++|||||+||.+++.++.++ |++|+++|+++++...... ...+.
T Consensus 177 ~ys~~~~a-~~l~~~i~~l~~~------~~~LvG~s~GG~ia~~~a~~~-----P~~v~~lILi~~~~~~~~~~~p~~l~ 244 (383)
T PLN03084 177 NYTLDEYV-SSLESLIDELKSD------KVSLVVQGYFSPPVVKYASAH-----PDKIKKLILLNPPLTKEHAKLPSTLS 244 (383)
T ss_pred cCCHHHHH-HHHHHHHHHhCCC------CceEEEECHHHHHHHHHHHhC-----hHhhcEEEEECCCCccccccchHHHH
Confidence 46677776 8999999887443 899999999999999999997 8999999999987532110 00000
Q ss_pred hhccccChhhhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcH-HHHHHHHHHHH
Q 008186 401 LLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPA-KLILQLTTAFR 479 (574)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 479 (574)
.+.. . .....+..... .....++.. ........+....+.......... .....+...+.
T Consensus 245 ~~~~---~-------------l~~~~~~~~~~-~~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~ 305 (383)
T PLN03084 245 EFSN---F-------------LLGEIFSQDPL-RASDKALTS--CGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMK 305 (383)
T ss_pred HHHH---H-------------HhhhhhhcchH-HHHhhhhcc--cCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhh
Confidence 0000 0 00000000000 000000000 000111222222211111100000 11111111111
Q ss_pred cCCcccCCCcccccc--ccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchh
Q 008186 480 EGGLRDRGGKFFYKD--HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVE 557 (574)
Q Consensus 480 ~~~~~~~~~~~~~~~--~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe 557 (574)
. .+.... ..... ...+|++|+|+|+|++|.+++.+.++.+.+. ++. +++++ ++++|+.|.| .|+
T Consensus 306 ~-~l~~~~--~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a--~l~vI--p~aGH~~~~E------~Pe 371 (383)
T PLN03084 306 K-ELKKYI--EEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQH--KLIEL--PMAGHHVQED------CGE 371 (383)
T ss_pred c-ccchhh--HHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCC--eEEEE--CCCCCCcchh------CHH
Confidence 1 000000 00111 1146899999999999999999988888887 455 77888 7888888876 899
Q ss_pred hHHHHHHHHHhh
Q 008186 558 QVYPCIVQFLGR 569 (574)
Q Consensus 558 ~v~~~Il~FL~~ 569 (574)
++++.|.+||.+
T Consensus 372 ~v~~~I~~Fl~~ 383 (383)
T PLN03084 372 ELGGIISGILSK 383 (383)
T ss_pred HHHHHHHHHhhC
Confidence 999999999863
No 28
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.87 E-value=5.7e-21 Score=192.47 Aligned_cols=65 Identities=28% Similarity=0.499 Sum_probs=56.3
Q ss_pred cccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 008186 494 DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 568 (574)
Q Consensus 494 ~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~ 568 (574)
..+++|++|+++|+|++|.++|++.++.+.+.+++. +++++ ++++|+.+.+ .|+++.+.|.+|++
T Consensus 214 ~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 214 RDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTA--TLHVV--PGGGHLVHEE------QADGVVGLILQAAE 278 (278)
T ss_pred hhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCC--eEEEE--CCCCCccccc------CHHHHHHHHHHHhC
Confidence 457889999999999999999999999999999987 77877 6666766665 89999999999985
No 29
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.87 E-value=1.4e-20 Score=188.53 Aligned_cols=215 Identities=18% Similarity=0.202 Sum_probs=116.6
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhhh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQA 411 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~~ 411 (574)
..+.+-|+..+...|.. |.+|+|||+||.++..||.+| |++|+++||++|...............+....+..
T Consensus 144 ~~fvesiE~WR~~~~L~--KmilvGHSfGGYLaa~YAlKy-----PerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~ 216 (365)
T KOG4409|consen 144 KEFVESIEQWRKKMGLE--KMILVGHSFGGYLAAKYALKY-----PERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKA 216 (365)
T ss_pred HHHHHHHHHHHHHcCCc--ceeEeeccchHHHHHHHHHhC-----hHhhceEEEecccccccCCCcchhhcCCChHHHhh
Confidence 45667788888888877 999999999999999999998 99999999999876544321111111111111100
Q ss_pred cC--CCccchHhHHHHhCCCCCCchhHHHHHhhhhcc-cccCCHHHHHHH-HhhcccCCcHHHHHHHHHHHHcCCcccCC
Q 008186 412 LN--VPVVPLGALLTAAYPLSSSPPYVFSWLNNLISA-EDMMHPELLKKL-VLNNFCTIPAKLILQLTTAFREGGLRDRG 487 (574)
Q Consensus 412 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (574)
.. ...+..-..++.+.++.. ..+.++....+.. ++....+.+.++ +..+..+-+. -..+...+..+++..
T Consensus 217 ~~~~~~~~nPl~~LR~~Gp~Gp--~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psg--E~~fk~l~~~~g~Ar-- 290 (365)
T KOG4409|consen 217 LFLVATNFNPLALLRLMGPLGP--KLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSG--ETAFKNLFEPGGWAR-- 290 (365)
T ss_pred hhhhhhcCCHHHHHHhccccch--HHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcH--HHHHHHHHhccchhh--
Confidence 00 000000001111111110 0111111111111 111222332222 2222111111 122222233333221
Q ss_pred CccccccccCCCC--CcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHH
Q 008186 488 GKFFYKDHIHKCN--IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQ 565 (574)
Q Consensus 488 ~~~~~~~~l~~I~--vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~ 565 (574)
....+++..++ ||+++|+|++|++ +.....++.+.++...++++++ ++++|....| +|+.|++.|++
T Consensus 291 --~Pm~~r~~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v--~~aGHhvylD------np~~Fn~~v~~ 359 (365)
T KOG4409|consen 291 --RPMIQRLRELKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIV--PGAGHHVYLD------NPEFFNQIVLE 359 (365)
T ss_pred --hhHHHHHHhhccCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEe--cCCCceeecC------CHHHHHHHHHH
Confidence 12233455555 9999999999987 5667777777655545688888 6676766666 99999999999
Q ss_pred HHhhh
Q 008186 566 FLGRY 570 (574)
Q Consensus 566 FL~~~ 570 (574)
+++..
T Consensus 360 ~~~~~ 364 (365)
T KOG4409|consen 360 ECDKV 364 (365)
T ss_pred HHhcc
Confidence 98753
No 30
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.87 E-value=1.3e-20 Score=222.70 Aligned_cols=301 Identities=19% Similarity=0.338 Sum_probs=187.0
Q ss_pred CceEEEEEeCCCCC---CCCCCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCcccCCCCCchhhhhh
Q 008186 91 DWRLALWRYNPPPQ---APTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSVRGSNLKEAQQS 167 (574)
Q Consensus 91 ~~~l~~~~~~p~~~---~~~~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G~S~~~~~~~~~~~~ 167 (574)
...+.+++|.|... ++..++||||+||++.+...||+.+..|+.++|.++||+||++|+ |.|+++..
T Consensus 46 ~~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~------- 115 (994)
T PRK07868 46 VPMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEG------- 115 (994)
T ss_pred cCcEEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHc-------
Confidence 44578889987753 123568999999999999999999999999999999999999994 66554310
Q ss_pred cccchhHHHHhhccCCcCCCccccccccccccccchhhhhHHHHHHhhhhhhccccccccchhhhhhhHHHHHhhhhccc
Q 008186 168 AHGVSEQMEAVANNSKISPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERLSGFLSENQSKIMSAKLFDQISKLLEDS 247 (574)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (574)
T Consensus 116 -------------------------------------------------------------------------------- 115 (994)
T PRK07868 116 -------------------------------------------------------------------------------- 115 (994)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhHHhhhhhhhHhhhhhhhHHHHHHHhHHHHHHHHhcCcEEeccccchhhhhcccchhHHhhcccceeccCCCcc
Q 008186 248 QLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFD 327 (574)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~Gy~vi~pdl~~~~~~~~~~~~~~~~~~~~~~~~d~s~~ 327 (574)
.+++++.
T Consensus 116 -------------------------------------------------------------------------~~~~~l~ 122 (994)
T PRK07868 116 -------------------------------------------------------------------------GMERNLA 122 (994)
T ss_pred -------------------------------------------------------------------------CccCCHH
Confidence 0124455
Q ss_pred chhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchh--HH-Hhhcc
Q 008186 328 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKS--TL-KLLLP 404 (574)
Q Consensus 328 ~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~--~l-~~~~~ 404 (574)
+++ .++.++++.++...+ + +++++||||||.+++.+++.+ .+++|+++|+++++.++..... .. .....
T Consensus 123 ~~i-~~l~~~l~~v~~~~~-~--~v~lvG~s~GG~~a~~~aa~~----~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~ 194 (994)
T PRK07868 123 DHV-VALSEAIDTVKDVTG-R--DVHLVGYSQGGMFCYQAAAYR----RSKDIASIVTFGSPVDTLAALPMGIPAGLAAA 194 (994)
T ss_pred HHH-HHHHHHHHHHHHhhC-C--ceEEEEEChhHHHHHHHHHhc----CCCccceEEEEecccccCCCCcccchhhhhhc
Confidence 665 567777777766543 2 899999999999999998753 1458999999999887643211 00 00000
Q ss_pred ccChh--hhcCCCccchHhHHHHhCCCCCCc---hhHHHHHhhhhcccccCCHHHHHHHHhhc-ccCCcHHHHHHHHHHH
Q 008186 405 LADPA--QALNVPVVPLGALLTAAYPLSSSP---PYVFSWLNNLISAEDMMHPELLKKLVLNN-FCTIPAKLILQLTTAF 478 (574)
Q Consensus 405 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 478 (574)
..... .......++ +.+....+...... .....++..+.......+.+.++.+.... +...+......+...+
T Consensus 195 ~~~~~~~~~~~~~~~p-~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~ 273 (994)
T PRK07868 195 AADFMADHVFNRLDIP-GWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQF 273 (994)
T ss_pred ccccchhhhhhcCCCC-HHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHH
Confidence 00000 000000000 00111111111110 11122222222222223334444443322 1122333444444443
Q ss_pred Hc-CCcccCCCccccc---cccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEE-EEEeCCCCCCCCcccccccc
Q 008186 479 RE-GGLRDRGGKFFYK---DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTY-KVFGEPSGPHYAHYDLVGGR 553 (574)
Q Consensus 479 ~~-~~~~~~~~~~~~~---~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l-~ii~~~~~~h~gH~d~l~~~ 553 (574)
.. +.+. .+.+... ..+++|++|+|+|+|++|.++|++.++.+.+.+++. ++ .++ .++||++++.+.
T Consensus 274 ~~~n~~~--~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a--~~~~~~-----~~~GH~g~~~g~ 344 (994)
T PRK07868 274 IAHNRMM--TGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNA--EVYESL-----IRAGHFGLVVGS 344 (994)
T ss_pred HHhCccc--CceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC--eEEEEe-----CCCCCEeeeech
Confidence 32 1211 1222222 358999999999999999999999999999999987 55 344 677888889999
Q ss_pred cchhhHHHHHHHHHhhhcC
Q 008186 554 MAVEQVYPCIVQFLGRYDS 572 (574)
Q Consensus 554 ~~pe~v~~~Il~FL~~~~~ 572 (574)
..++++++.|.+||.+++.
T Consensus 345 ~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 345 RAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred hhhhhhChHHHHHHHHhcc
Confidence 9999999999999998865
No 31
>PRK07581 hypothetical protein; Validated
Probab=99.86 E-value=3.2e-20 Score=194.19 Aligned_cols=71 Identities=18% Similarity=0.183 Sum_probs=59.9
Q ss_pred ccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCC-CCCCCcccccccccchhhHHHHHHHHHhh
Q 008186 491 FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPS-GPHYAHYDLVGGRMAVEQVYPCIVQFLGR 569 (574)
Q Consensus 491 ~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~-~~h~gH~d~l~~~~~pe~v~~~Il~FL~~ 569 (574)
+..+.+++|++|||+|+|++|.++|++.++.+.+.+|++ +++++ ++ ++|..+.+ .++++.+.|.+||++
T Consensus 266 d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a--~l~~i--~~~~GH~~~~~------~~~~~~~~~~~~~~~ 335 (339)
T PRK07581 266 DLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNA--ELRPI--ESIWGHLAGFG------QNPADIAFIDAALKE 335 (339)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC--eEEEe--CCCCCcccccc------CcHHHHHHHHHHHHH
Confidence 345678899999999999999999999999999999987 88888 54 55666554 889999999999987
Q ss_pred hc
Q 008186 570 YD 571 (574)
Q Consensus 570 ~~ 571 (574)
..
T Consensus 336 ~~ 337 (339)
T PRK07581 336 LL 337 (339)
T ss_pred HH
Confidence 53
No 32
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.86 E-value=7.7e-21 Score=188.31 Aligned_cols=190 Identities=11% Similarity=0.140 Sum_probs=99.8
Q ss_pred cchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchh-hcceeEEccCCCCCCchhHHHhhccc
Q 008186 327 DHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESR-LAAIVTLASSLDYTSSKSTLKLLLPL 405 (574)
Q Consensus 327 ~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~-v~~lVlLap~~~~~~~~~~l~~~~~~ 405 (574)
++++ +|+.++++.+.. + +++++||||||.+++.+|.++ ++. |+++|++++...............
T Consensus 50 ~~~~-~~l~~~l~~~~~----~--~~~lvG~S~Gg~va~~~a~~~-----~~~~v~~lvl~~~~~~~~~~~~~~~~~~-- 115 (242)
T PRK11126 50 ADVS-RLLSQTLQSYNI----L--PYWLVGYSLGGRIAMYYACQG-----LAGGLCGLIVEGGNPGLQNAEERQARWQ-- 115 (242)
T ss_pred HHHH-HHHHHHHHHcCC----C--CeEEEEECHHHHHHHHHHHhC-----CcccccEEEEeCCCCCCCCHHHHHHHHh--
Confidence 3444 788888876532 2 899999999999999999986 554 999999887654332111100000
Q ss_pred cChhhhcCCCccchHhHHHHhCCCCCCchhHHHHHhh-hhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcc
Q 008186 406 ADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNN-LISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLR 484 (574)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (574)
.. ..+...+ ........+..|+.. .+.. ........+..... .........+.... .+.
T Consensus 116 -~~-----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~ 175 (242)
T PRK11126 116 -ND-----------RQWAQRF-RQEPLEQVLADWYQQPVFAS---LNAEQRQQLVAKRS-NNNGAAVAAMLEAT---SLA 175 (242)
T ss_pred -hh-----------HHHHHHh-ccCcHHHHHHHHHhcchhhc---cCccHHHHHHHhcc-cCCHHHHHHHHHhc---Ccc
Confidence 00 0000000 000000111111110 0000 11111111111111 11111111111111 011
Q ss_pred cCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHH
Q 008186 485 DRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIV 564 (574)
Q Consensus 485 ~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il 564 (574)
...+..+.+.+++||+++|+|++|..+. .+.+. ++. +++++ ++++|+.|.+ .|+++.+.|.
T Consensus 176 ---~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~ 236 (242)
T PRK11126 176 ---KQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-LAL--PLHVI--PNAGHNAHRE------NPAAFAASLA 236 (242)
T ss_pred ---cCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-hcC--eEEEe--CCCCCchhhh------ChHHHHHHHH
Confidence 1123345788999999999999998652 23333 244 78888 7777777776 8999999999
Q ss_pred HHHhh
Q 008186 565 QFLGR 569 (574)
Q Consensus 565 ~FL~~ 569 (574)
+||+.
T Consensus 237 ~fl~~ 241 (242)
T PRK11126 237 QILRL 241 (242)
T ss_pred HHHhh
Confidence 99975
No 33
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.86 E-value=1.4e-20 Score=184.38 Aligned_cols=66 Identities=21% Similarity=0.372 Sum_probs=56.8
Q ss_pred cccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHH
Q 008186 492 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 567 (574)
Q Consensus 492 ~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL 567 (574)
....+.+|++|+++++|++|.++|++..+.+.+.+|+. +++++ ++++|+.+++ .|+++++.|.+|+
T Consensus 180 ~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~fi 245 (245)
T TIGR01738 180 LRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHS--ELYIF--AKAAHAPFLS------HAEAFCALLVAFK 245 (245)
T ss_pred HHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCC--eEEEe--CCCCCCcccc------CHHHHHHHHHhhC
Confidence 34567899999999999999999999999999999977 78888 6666776665 8999999999996
No 34
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.86 E-value=1.8e-20 Score=196.55 Aligned_cols=68 Identities=18% Similarity=0.252 Sum_probs=57.2
Q ss_pred ccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhC-CCCceEEEEEeCCC-CCCCCcccccccccchhhHHHHHHHHHhhhcC
Q 008186 495 HIHKCNIPILAIAGDQDLICPPEAVEETVKLL-PEDLVTYKVFGEPS-GPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 572 (574)
Q Consensus 495 ~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~l-p~a~~~l~ii~~~~-~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~~~ 572 (574)
.+.+|++|+|+|+|++|.++|++.++++.+.+ |++ +++++ ++ ++|..+++ +|++|++.|.+||++...
T Consensus 272 ~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a--~l~~i--~~~aGH~~~lE------~Pe~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 272 DPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRG--SLRVL--RSPYGHDAFLK------ETDRIDAILTTALRSTGE 341 (343)
T ss_pred ChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCC--eEEEE--eCCccHHHHhc------CHHHHHHHHHHHHHhccc
Confidence 46789999999999999999999999999988 666 77887 43 56666665 899999999999987654
No 35
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.86 E-value=1.2e-20 Score=177.26 Aligned_cols=181 Identities=19% Similarity=0.239 Sum_probs=124.2
Q ss_pred CCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhc
Q 008186 324 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLL 403 (574)
Q Consensus 324 ~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~ 403 (574)
.+.++|. +|+.+..+++... | .+.+.++|.||||.+++.+|..+ | ++++|.+|++.........+.-+.
T Consensus 63 t~~~DW~-~~v~d~Y~~L~~~-g--y~eI~v~GlSmGGv~alkla~~~-----p--~K~iv~m~a~~~~k~~~~iie~~l 131 (243)
T COG1647 63 TTPRDWW-EDVEDGYRDLKEA-G--YDEIAVVGLSMGGVFALKLAYHY-----P--PKKIVPMCAPVNVKSWRIIIEGLL 131 (243)
T ss_pred CCHHHHH-HHHHHHHHHHHHc-C--CCeEEEEeecchhHHHHHHHhhC-----C--ccceeeecCCcccccchhhhHHHH
Confidence 3455776 8888888888754 2 33899999999999999999986 3 899999999876444322221111
Q ss_pred cccChhhhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCc
Q 008186 404 PLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGL 483 (574)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (574)
.+.... ......+.+.+.+.+... ...+...+.++...+.
T Consensus 132 ----------------------------------~y~~~~-kk~e~k~~e~~~~e~~~~-~~~~~~~~~~~~~~i~---- 171 (243)
T COG1647 132 ----------------------------------EYFRNA-KKYEGKDQEQIDKEMKSY-KDTPMTTTAQLKKLIK---- 171 (243)
T ss_pred ----------------------------------HHHHHh-hhccCCCHHHHHHHHHHh-hcchHHHHHHHHHHHH----
Confidence 111111 111123555555443332 1224444445544443
Q ss_pred ccCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHH
Q 008186 484 RDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCI 563 (574)
Q Consensus 484 ~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~I 563 (574)
+....+..|..|+++++|++|+++|.+.+..+++.+...++++.++ .+.+|. +.....++++.+.|
T Consensus 172 -------~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~-----e~SgHV--It~D~Erd~v~e~V 237 (243)
T COG1647 172 -------DARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWL-----EGSGHV--ITLDKERDQVEEDV 237 (243)
T ss_pred -------HHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEE-----ccCCce--eecchhHHHHHHHH
Confidence 2345788999999999999999999999999999887778899998 555553 44446889999999
Q ss_pred HHHHhh
Q 008186 564 VQFLGR 569 (574)
Q Consensus 564 l~FL~~ 569 (574)
..||+.
T Consensus 238 ~~FL~~ 243 (243)
T COG1647 238 ITFLEK 243 (243)
T ss_pred HHHhhC
Confidence 999973
No 36
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.86 E-value=2.7e-21 Score=186.40 Aligned_cols=180 Identities=19% Similarity=0.350 Sum_probs=102.8
Q ss_pred CCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCch--hHHHh
Q 008186 324 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSK--STLKL 401 (574)
Q Consensus 324 ~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~--~~l~~ 401 (574)
+++++++ +|+.++++.+... +++++|||+||.+++.++.++ |++|+++|++++........ .....
T Consensus 47 ~~~~~~~-~~l~~~l~~~~~~------~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~~~~ 114 (228)
T PF12697_consen 47 YSIEDYA-EDLAELLDALGIK------KVILVGHSMGGMIALRLAARY-----PDRVKGLVLLSPPPPLPDSPSRSFGPS 114 (228)
T ss_dssp GSHHHHH-HHHHHHHHHTTTS------SEEEEEETHHHHHHHHHHHHS-----GGGEEEEEEESESSSHHHHHCHHHHHH
T ss_pred cchhhhh-hhhhhcccccccc------ccccccccccccccccccccc-----ccccccceeecccccccccccccccch
Confidence 3344555 7777777776443 899999999999999999986 88999999999986532211 00000
Q ss_pred hccccChhhhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcC
Q 008186 402 LLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREG 481 (574)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (574)
++....... ......+....+.. ............. ....+..+....
T Consensus 115 --------------------~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~--- 162 (228)
T PF12697_consen 115 --------------------FIRRLLAWR--SRSLRRLASRFFYR--WFDGDEPEDLIRS-----SRRALAEYLRSN--- 162 (228)
T ss_dssp --------------------HHHHHHHHH--HHHHHHHHHHHHHH--HHTHHHHHHHHHH-----HHHHHHHHHHHH---
T ss_pred --------------------hhhhhhhcc--cccccccccccccc--ccccccccccccc-----cccccccccccc---
Confidence 000000000 00000000000000 0011111111111 111111111100
Q ss_pred CcccCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHH
Q 008186 482 GLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYP 561 (574)
Q Consensus 482 ~~~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~ 561 (574)
....++...++++++|+++++|++|.+++.+..+.+.+.+++. +++++ ++++|+.+.+ +|++|++
T Consensus 163 -----~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~p~~~~~ 227 (228)
T PF12697_consen 163 -----LWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNA--ELVVI--PGAGHFLFLE------QPDEVAE 227 (228)
T ss_dssp -----HHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTE--EEEEE--TTSSSTHHHH------SHHHHHH
T ss_pred -----cccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCC--EEEEE--CCCCCccHHH------CHHHHhc
Confidence 0011234567888999999999999999999999999999876 88888 5666666654 7888876
Q ss_pred H
Q 008186 562 C 562 (574)
Q Consensus 562 ~ 562 (574)
+
T Consensus 228 a 228 (228)
T PF12697_consen 228 A 228 (228)
T ss_dssp H
T ss_pred C
Confidence 3
No 37
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.85 E-value=6.1e-20 Score=184.51 Aligned_cols=66 Identities=26% Similarity=0.511 Sum_probs=54.4
Q ss_pred cccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 008186 492 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 568 (574)
Q Consensus 492 ~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~ 568 (574)
..+.+.+++||+++++|++|.+ +++..+.+.+.+++. +++++ ++++|+.+.+ .|+++.+.|.+||+
T Consensus 223 ~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 223 ITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGS--RLVVF--PDGSHMTMIE------DPEVYFKLLSDFIR 288 (288)
T ss_pred HHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCC--eEEEe--CCCCCCcccC------CHHHHHHHHHHHhC
Confidence 3456788999999999999985 678888899988876 77777 5666666665 89999999999984
No 38
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.85 E-value=3.3e-20 Score=189.57 Aligned_cols=59 Identities=20% Similarity=0.426 Sum_probs=51.7
Q ss_pred CCcEEEEEeCCCCCCCHH-HHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 008186 500 NIPILAIAGDQDLICPPE-AVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 568 (574)
Q Consensus 500 ~vPvLII~Ge~D~vvp~e-~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~ 568 (574)
++|||+|+|++|.++++. ..+.+.+.+|+. +++++ ++++|+.|.+ +|+++++.|.+||.
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~--~~~~i--~~aGH~~~~e------~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFPDH--VLVEL--PNAKHFIQED------APDRIAAAIIERFG 286 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcCCC--eEEEc--CCCccccccc------CHHHHHHHHHHhcC
Confidence 799999999999988655 578899999987 88888 7788888876 89999999999973
No 39
>PRK13604 luxD acyl transferase; Provisional
Probab=99.85 E-value=6.5e-20 Score=185.35 Aligned_cols=70 Identities=21% Similarity=0.443 Sum_probs=55.7
Q ss_pred cceeeecCCCceEEEEEeCCCCCCCCCCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCC-cccCC
Q 008186 82 LHYVSVANCDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGA-GLSVR 157 (574)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~-G~S~~ 157 (574)
-|.+.+. +|.+|..|...|....+...+.||++||++.+...| ..+|++|+++||.|+++|.||+ |.|..
T Consensus 11 ~~~~~~~-dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~-----~~~A~~La~~G~~vLrfD~rg~~GeS~G 81 (307)
T PRK13604 11 DHVICLE-NGQSIRVWETLPKENSPKKNNTILIASGFARRMDHF-----AGLAEYLSSNGFHVIRYDSLHHVGLSSG 81 (307)
T ss_pred hheEEcC-CCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHH-----HHHHHHHHHCCCEEEEecCCCCCCCCCC
Confidence 4666776 899999997777533233455699999999986443 4799999999999999999998 99964
No 40
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.85 E-value=5.5e-20 Score=179.99 Aligned_cols=64 Identities=25% Similarity=0.414 Sum_probs=52.4
Q ss_pred cccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 008186 494 DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 568 (574)
Q Consensus 494 ~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~ 568 (574)
..+.++++|+++++|++|..++ +..+.+.+.+++. +++++ ++++|+.+.+ .|+++.+.|.+||+
T Consensus 188 ~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 188 PKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNL--TLVII--ANAGHNIHLE------NPEAFAKILLAFLE 251 (251)
T ss_pred HHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCC--cEEEE--cCCCCCcCcc------ChHHHHHHHHHHhC
Confidence 4577899999999999998774 5677788888876 77777 6677777765 78999999999984
No 41
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.85 E-value=1.3e-19 Score=195.17 Aligned_cols=266 Identities=20% Similarity=0.291 Sum_probs=185.0
Q ss_pred CceEEEEEeCCCCCCCCCCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCcccCCCCCchhhhhhccc
Q 008186 91 DWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHG 170 (574)
Q Consensus 91 ~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G~S~~~~~~~~~~~~~~~ 170 (574)
.-.+.+++|.|..+. ....|||+++.+......||++|+.||+++|.++||+|+++|+|+-|...+
T Consensus 198 n~l~eLiqY~P~te~-v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r------------- 263 (560)
T TIGR01839 198 NEVLELIQYKPITEQ-QHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR------------- 263 (560)
T ss_pred CCceEEEEeCCCCCC-cCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc-------------
Confidence 345678889876432 356899999999988899999999999999999999999999999775543
Q ss_pred chhHHHHhhccCCcCCCccccccccccccccchhhhhHHHHHHhhhhhhccccccccchhhhhhhHHHHHhhhhcccccc
Q 008186 171 VSEQMEAVANNSKISPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERLSGFLSENQSKIMSAKLFDQISKLLEDSQLS 250 (574)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (574)
T Consensus 264 -------------------------------------------------------------------------------- 263 (560)
T TIGR01839 264 -------------------------------------------------------------------------------- 263 (560)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHhhhhhhhHhhhhhhhHHHHHHHhHHHHHHHHhcCcEEeccccchhhhhcccchhHHhhcccceeccCCCccchh
Q 008186 251 EGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYL 330 (574)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~Gy~vi~pdl~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~a 330 (574)
++++++|+
T Consensus 264 ------------------------------------------------------------------------~~~ldDYv 271 (560)
T TIGR01839 264 ------------------------------------------------------------------------EWGLSTYV 271 (560)
T ss_pred ------------------------------------------------------------------------CCCHHHHH
Confidence 46788998
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHH----HHHhcCCCCCch-hhcceeEEccCCCCCCchhHHHhhccc
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYA----MLSRCGFEGRES-RLAAIVTLASSLDYTSSKSTLKLLLPL 405 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~----~A~~~~~~~~p~-~v~~lVlLap~~~~~~~~~~l~~~~~~ 405 (574)
+.+.++|+.++...|.+ +++++||||||.+++. +++++ ++ +|++++++.+++++...... ..+...
T Consensus 272 -~~i~~Ald~V~~~tG~~--~vnl~GyC~GGtl~a~~~a~~aA~~-----~~~~V~sltllatplDf~~~g~l-~~f~~e 342 (560)
T TIGR01839 272 -DALKEAVDAVRAITGSR--DLNLLGACAGGLTCAALVGHLQALG-----QLRKVNSLTYLVSLLDSTMESPA-ALFADE 342 (560)
T ss_pred -HHHHHHHHHHHHhcCCC--CeeEEEECcchHHHHHHHHHHHhcC-----CCCceeeEEeeecccccCCCCcc-hhccCh
Confidence 79999999999998876 9999999999999997 56654 54 79999999999998653211 111100
Q ss_pred cCh---hhhcCCCccchHhHHHHhCCCCCCchhHHHHH-h-hhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHc
Q 008186 406 ADP---AQALNVPVVPLGALLTAAYPLSSSPPYVFSWL-N-NLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFRE 480 (574)
Q Consensus 406 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (574)
... ..........-+..+...|...+....+..++ . ++.+.... ...+. .+.....+++.....++...+..
T Consensus 343 ~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~--~fdll-~Wn~D~t~lPg~~~~e~l~ly~~ 419 (560)
T TIGR01839 343 QTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPP--AFDIL-YWNNDTTRLPAAFHGDLLDMFKS 419 (560)
T ss_pred HHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcc--hhhHH-HHhCcCccchHHHHHHHHHHHhc
Confidence 000 00111122233444555555554444343333 2 22222111 11122 22333456788888888887777
Q ss_pred CCcccCCCcccc---ccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEE
Q 008186 481 GGLRDRGGKFFY---KDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVF 536 (574)
Q Consensus 481 ~~~~~~~~~~~~---~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii 536 (574)
+.+... +.+.+ .-++++|+||++++.|+.|.|+|++.+..+.+.+.+ +++++..
T Consensus 420 N~L~~p-G~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~ 476 (560)
T TIGR01839 420 NPLTRP-DALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLS 476 (560)
T ss_pred CCCCCC-CCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEec
Confidence 666531 23322 238899999999999999999999999999999886 5777764
No 42
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.84 E-value=3.3e-20 Score=191.94 Aligned_cols=68 Identities=34% Similarity=0.481 Sum_probs=61.2
Q ss_pred cccCCCC-CcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhhc
Q 008186 494 DHIHKCN-IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 571 (574)
Q Consensus 494 ~~l~~I~-vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~~ 571 (574)
..+.+|. ||+||+||++|.++|.+.++.+.+.+|+. ++++| ++++|..|.+ .|+++++.|..|+..+.
T Consensus 257 ~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~--~~~~I--~~~gH~~h~e------~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 257 SLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNA--ELVEI--PGAGHLPHLE------RPEEVAALLRSFIARLR 325 (326)
T ss_pred HhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCc--eEEEe--CCCCcccccC------CHHHHHHHHHHHHHHhc
Confidence 3567776 99999999999999999999999999887 89998 8899999987 89999999999998764
No 43
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.84 E-value=7.1e-20 Score=191.02 Aligned_cols=67 Identities=21% Similarity=0.278 Sum_probs=53.6
Q ss_pred ccCCC--CCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 008186 495 HIHKC--NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 568 (574)
Q Consensus 495 ~l~~I--~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~ 568 (574)
.+.++ ++|+|+++|++|.+++++.++.+++.+...+++++++ +++.|..+.+ ..++++.+.|.+||+
T Consensus 263 ~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~--~g~~H~i~~E-----~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 263 DIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTL--EDMDHVITIE-----PGNEEVLKKIIEWIS 331 (332)
T ss_pred hHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEE--CCCCCCCccC-----CCHHHHHHHHHHHhh
Confidence 34455 7999999999999999999999988776445588888 6666776665 247899999999986
No 44
>PLN02511 hydrolase
Probab=99.84 E-value=7.3e-20 Score=194.81 Aligned_cols=196 Identities=20% Similarity=0.242 Sum_probs=104.1
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchh--hcceeEEccCCCCCCchhHHHhhccccChh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESR--LAAIVTLASSLDYTSSKSTLKLLLPLADPA 409 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~--v~~lVlLap~~~~~~~~~~l~~~~~~~~~~ 409 (574)
+|+.+++++++.+++.. ++++|||||||.+++.++.++ +++ |.++|+++++.+.......+... +...+
T Consensus 157 ~Dl~~~i~~l~~~~~~~--~~~lvG~SlGg~i~~~yl~~~-----~~~~~v~~~v~is~p~~l~~~~~~~~~~--~~~~y 227 (388)
T PLN02511 157 GDLRQVVDHVAGRYPSA--NLYAAGWSLGANILVNYLGEE-----GENCPLSGAVSLCNPFDLVIADEDFHKG--FNNVY 227 (388)
T ss_pred HHHHHHHHHHHHHCCCC--CEEEEEechhHHHHHHHHHhc-----CCCCCceEEEEECCCcCHHHHHHHHhcc--HHHHH
Confidence 89999999999886543 899999999999999999986 444 88999988876531111000000 00000
Q ss_pred hhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcc-cccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCC
Q 008186 410 QALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISA-EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGG 488 (574)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (574)
...+...+.. .+.. ....+.. ....+...+. ....+..+...+... ...+..
T Consensus 228 ---------~~~~~~~l~~------~~~~-~~~~~~~~~~~~~~~~~~----------~~~~~~~fd~~~t~~-~~gf~~ 280 (388)
T PLN02511 228 ---------DKALAKALRK------IFAK-HALLFEGLGGEYNIPLVA----------NAKTVRDFDDGLTRV-SFGFKS 280 (388)
T ss_pred ---------HHHHHHHHHH------HHHH-HHHHHhhCCCccCHHHHH----------hCCCHHHHHHhhhhh-cCCCCC
Confidence 0000000000 0000 0000000 0000000000 001111222211111 111111
Q ss_pred ------ccccccccCCCCCcEEEEEeCCCCCCCHHHH-HHHHHhCCCCceEEEEEeCCCCCCCCcccccccccc---hhh
Q 008186 489 ------KFFYKDHIHKCNIPILAIAGDQDLICPPEAV-EETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMA---VEQ 558 (574)
Q Consensus 489 ------~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~-~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~---pe~ 558 (574)
..+....+++|++|+|+|+|++|+++|++.. ..+.+.+|+. +++++ ++.||+.|+...+. ..+
T Consensus 281 ~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~--~l~~~-----~~gGH~~~~E~p~~~~~~~w 353 (388)
T PLN02511 281 VDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNC--LLIVT-----PSGGHLGWVAGPEAPFGAPW 353 (388)
T ss_pred HHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCE--EEEEC-----CCcceeccccCCCCCCCCcc
Confidence 1112347889999999999999999998765 4566677876 78877 45555554433221 135
Q ss_pred HHHHHHHHHhhh
Q 008186 559 VYPCIVQFLGRY 570 (574)
Q Consensus 559 v~~~Il~FL~~~ 570 (574)
+.+.|.+||+..
T Consensus 354 ~~~~i~~Fl~~~ 365 (388)
T PLN02511 354 TDPVVMEFLEAL 365 (388)
T ss_pred HHHHHHHHHHHH
Confidence 799999999765
No 45
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.84 E-value=1.1e-19 Score=191.19 Aligned_cols=69 Identities=23% Similarity=0.299 Sum_probs=55.9
Q ss_pred cccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEE--E-EEeCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 008186 492 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTY--K-VFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 568 (574)
Q Consensus 492 ~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l--~-ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~ 568 (574)
+.+.+++|++|+|+|+|++|.++|++.++.+.+.+|+....+ + ++ ++++|..|.+ .|++|++.|.+||+
T Consensus 280 ~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~--~~~GH~~~le------~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 280 LTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIE--SPYGHDAFLV------ETDQVEELIRGFLR 351 (351)
T ss_pred HHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeC--CCCCcchhhc------CHHHHHHHHHHHhC
Confidence 456889999999999999999999999999999999873222 1 33 3556666654 89999999999985
No 46
>PRK10985 putative hydrolase; Provisional
Probab=99.83 E-value=1.8e-19 Score=187.44 Aligned_cols=199 Identities=18% Similarity=0.194 Sum_probs=107.8
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhh-ccccChhh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLL-LPLADPAQ 410 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~-~~~~~~~~ 410 (574)
+|+.+++++++++++.. +++++||||||.+++.++.+++. ...+.++|+++++.+.......+... ..+...
T Consensus 115 ~D~~~~i~~l~~~~~~~--~~~~vG~S~GG~i~~~~~~~~~~---~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~-- 187 (324)
T PRK10985 115 EDARFFLRWLQREFGHV--PTAAVGYSLGGNMLACLLAKEGD---DLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQR-- 187 (324)
T ss_pred HHHHHHHHHHHHhCCCC--CEEEEEecchHHHHHHHHHhhCC---CCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHH--
Confidence 88999999998876644 89999999999999988887511 12489999999887643322111100 000000
Q ss_pred hcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCcc
Q 008186 411 ALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKF 490 (574)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (574)
.+...+. ..+...+...... ...+.+.+.. .+.++.+...+.. .+..+....
T Consensus 188 ----------~l~~~l~------~~~~~~~~~~~~~-~~~~~~~~~~----------~~~~~~fd~~~~~-~~~g~~~~~ 239 (324)
T PRK10985 188 ----------YLLNLLK------ANAARKLAAYPGT-LPINLAQLKS----------VRRLREFDDLITA-RIHGFADAI 239 (324)
T ss_pred ----------HHHHHHH------HHHHHHHHhcccc-ccCCHHHHhc----------CCcHHHHhhhhee-ccCCCCCHH
Confidence 0000000 0000000000000 0011111110 0111112111111 111111111
Q ss_pred ------ccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccc--cchhhHHHH
Q 008186 491 ------FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGR--MAVEQVYPC 562 (574)
Q Consensus 491 ------~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~--~~pe~v~~~ 562 (574)
+..+.+++|++|+++|+|++|++++++....+.+..++. +++++ .+.||+.++.+. ....+..+.
T Consensus 240 ~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~GH~~~~~g~~~~~~~w~~~~ 312 (324)
T PRK10985 240 DYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNV--EYQLT-----EHGGHVGFVGGTLLKPQMWLEQR 312 (324)
T ss_pred HHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCe--EEEEC-----CCCCceeeCCCCCCCCCccHHHH
Confidence 123467899999999999999999998888777777765 77776 445555555442 233688999
Q ss_pred HHHHHhhhcC
Q 008186 563 IVQFLGRYDS 572 (574)
Q Consensus 563 Il~FL~~~~~ 572 (574)
+.+|++....
T Consensus 313 ~~~~~~~~~~ 322 (324)
T PRK10985 313 IPDWLTTYLE 322 (324)
T ss_pred HHHHHHHhhc
Confidence 9999976643
No 47
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.83 E-value=1.7e-19 Score=183.08 Aligned_cols=63 Identities=14% Similarity=0.227 Sum_probs=52.6
Q ss_pred cCCC-CCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 008186 496 IHKC-NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 569 (574)
Q Consensus 496 l~~I-~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~ 569 (574)
..++ ++|+++|+|++|.++|++..+.+.+.+++. +++.+ +++|..+++ .|+++.+.|.++...
T Consensus 206 ~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~--~~~~l---~~gH~p~ls------~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 206 TGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPS--QVYEL---ESDHSPFFS------TPFLLFGLLIKAAAS 269 (273)
T ss_pred ccccCccceEEEEeCCCCCCCHHHHHHHHHhCCcc--EEEEE---CCCCCcccc------CHHHHHHHHHHHHHH
Confidence 3455 789999999999999999999999999976 77787 356666665 899999999988654
No 48
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.83 E-value=4.7e-19 Score=187.08 Aligned_cols=187 Identities=19% Similarity=0.266 Sum_probs=101.0
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhhh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQA 411 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~~ 411 (574)
+++.++++.+ +.. +++++||||||.+++.+|..+ +.++.++|++++...........
T Consensus 185 ~~~~~~~~~~----~~~--~~~lvG~S~Gg~~a~~~a~~~-----~~~v~~lv~~~~~~~~~~~~~~~------------ 241 (371)
T PRK14875 185 AAVLAFLDAL----GIE--RAHLVGHSMGGAVALRLAARA-----PQRVASLTLIAPAGLGPEINGDY------------ 241 (371)
T ss_pred HHHHHHHHhc----CCc--cEEEEeechHHHHHHHHHHhC-----chheeEEEEECcCCcCcccchhH------------
Confidence 5555555543 333 899999999999999999885 88999999998764321110000
Q ss_pred cCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCccc
Q 008186 412 LNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFF 491 (574)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (574)
...+. .......+..++...+..........................+..+..... .......+
T Consensus 242 -----------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 305 (371)
T PRK14875 242 -----------IDGFV-AAESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALF----AGGRQRVD 305 (371)
T ss_pred -----------HHHhh-cccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhc----cCcccchh
Confidence 00000 000000111222222211111122222222111100001111111111111 11111233
Q ss_pred cccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 008186 492 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 492 ~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~ 570 (574)
+...+.+++||+|+++|++|.++|++..+.+. ++. ++.++ ++++|..+.+ .|+++.+.|.+||+++
T Consensus 306 ~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~---~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 306 LRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP---DGV--AVHVL--PGAGHMPQME------AAADVNRLLAEFLGKA 371 (371)
T ss_pred HHHHHhcCCCCEEEEEECCCCccCHHHHhhcc---CCC--eEEEe--CCCCCChhhh------CHHHHHHHHHHHhccC
Confidence 44567889999999999999999988655432 233 77777 6677777765 8999999999999763
No 49
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.82 E-value=5.6e-19 Score=182.21 Aligned_cols=64 Identities=31% Similarity=0.412 Sum_probs=48.6
Q ss_pred ccccCCC-CCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 008186 493 KDHIHKC-NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 569 (574)
Q Consensus 493 ~~~l~~I-~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~ 569 (574)
...+.++ ++|+|+|+|++|.++|.+.++.+++.+++. +++++ ++++|..+. +...+.|.+|+..
T Consensus 240 ~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~---------~~~~~~i~~~~~~ 304 (306)
T TIGR01249 240 LDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEA--ELKVT--NNAGHSAFD---------PNNLAALVHALET 304 (306)
T ss_pred HHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCC--EEEEE--CCCCCCCCC---------hHHHHHHHHHHHH
Confidence 3466777 599999999999999999999999999977 78887 455555543 3355666666554
No 50
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.82 E-value=2.1e-18 Score=184.46 Aligned_cols=71 Identities=17% Similarity=0.199 Sum_probs=54.8
Q ss_pred ccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 008186 491 FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 491 ~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~ 570 (574)
+....+.+|++|+++|+|++|.+++ .....+.+.++. ..+++++ ++++|+.|.| +|+.|++.|.+|++.+
T Consensus 316 ~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~-~~~~~~i--~~aGH~~~~E------~P~~f~~~l~~~~~~~ 385 (402)
T PLN02894 316 PLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKV-PCEIIRV--PQGGHFVFLD------NPSGFHSAVLYACRKY 385 (402)
T ss_pred hHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCC-CCcEEEe--CCCCCeeecc------CHHHHHHHHHHHHHHh
Confidence 3345688899999999999998875 556666666542 2377777 7777877776 8999999999999876
Q ss_pred c
Q 008186 571 D 571 (574)
Q Consensus 571 ~ 571 (574)
.
T Consensus 386 ~ 386 (402)
T PLN02894 386 L 386 (402)
T ss_pred c
Confidence 4
No 51
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.82 E-value=7.4e-19 Score=186.77 Aligned_cols=73 Identities=19% Similarity=0.196 Sum_probs=58.8
Q ss_pred cccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCc--eEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 008186 492 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDL--VTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 569 (574)
Q Consensus 492 ~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~--~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~ 569 (574)
+.+.+.+|++|+|+|+|++|.++|++.++.+.+.+++.. .+++++ .++++|..+++ +|+++++.|.+||++
T Consensus 301 ~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i-~~~~GH~~~le------~p~~~~~~L~~FL~~ 373 (379)
T PRK00175 301 LAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEI-DSPYGHDAFLL------DDPRYGRLVRAFLER 373 (379)
T ss_pred HHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEe-CCCCCchhHhc------CHHHHHHHHHHHHHh
Confidence 456789999999999999999999999999999998753 245554 02455555554 899999999999988
Q ss_pred hc
Q 008186 570 YD 571 (574)
Q Consensus 570 ~~ 571 (574)
..
T Consensus 374 ~~ 375 (379)
T PRK00175 374 AA 375 (379)
T ss_pred hh
Confidence 65
No 52
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.79 E-value=4.6e-18 Score=208.30 Aligned_cols=206 Identities=15% Similarity=0.255 Sum_probs=113.3
Q ss_pred CCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhc
Q 008186 324 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLL 403 (574)
Q Consensus 324 ~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~ 403 (574)
|+++.++ +|+.++++.+.. + +++++||||||.+++.++.+| |++|+++|++++......... ....
T Consensus 1426 ~si~~~a-~~l~~ll~~l~~----~--~v~LvGhSmGG~iAl~~A~~~-----P~~V~~lVlis~~p~~~~~~~--~~~~ 1491 (1655)
T PLN02980 1426 LSVELVA-DLLYKLIEHITP----G--KVTLVGYSMGARIALYMALRF-----SDKIEGAVIISGSPGLKDEVA--RKIR 1491 (1655)
T ss_pred CCHHHHH-HHHHHHHHHhCC----C--CEEEEEECHHHHHHHHHHHhC-----hHhhCEEEEECCCCccCchHH--HHHH
Confidence 4455555 777777776532 2 899999999999999999997 899999999987544322110 0000
Q ss_pred cccChhhhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCc
Q 008186 404 PLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGL 483 (574)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (574)
...... ....+.. .....++..|+...........+. +......................+...
T Consensus 1492 ~~~~~~------------~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 1555 (1655)
T PLN02980 1492 SAKDDS------------RARMLID-HGLEIFLENWYSGELWKSLRNHPH-FNKIVASRLLHKDVPSLAKLLSDLSIG-- 1555 (1655)
T ss_pred hhhhhH------------HHHHHHh-hhHHHHHHHhccHHHhhhhccCHH-HHHHHHHHHhcCCHHHHHHHHHHhhhc--
Confidence 000000 0000000 000001111111000000000111 111111111111111111111111100
Q ss_pred ccCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCC----------ceEEEEEeCCCCCCCCcccccccc
Q 008186 484 RDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED----------LVTYKVFGEPSGPHYAHYDLVGGR 553 (574)
Q Consensus 484 ~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a----------~~~l~ii~~~~~~h~gH~d~l~~~ 553 (574)
...+..+.+.+|++|+|+|+|++|.+++ +.+.++.+.+++. ..+++++ ++++|..|.+
T Consensus 1556 ----~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI--~~aGH~~~lE----- 1623 (1655)
T PLN02980 1556 ----RQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEI--PNCGHAVHLE----- 1623 (1655)
T ss_pred ----ccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEE--CCCCCchHHH-----
Confidence 1123346789999999999999999885 6677888888763 1477888 7888888876
Q ss_pred cchhhHHHHHHHHHhhhcC
Q 008186 554 MAVEQVYPCIVQFLGRYDS 572 (574)
Q Consensus 554 ~~pe~v~~~Il~FL~~~~~ 572 (574)
+|+++++.|.+||++..+
T Consensus 1624 -~Pe~f~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1624 -NPLPVIRALRKFLTRLHN 1641 (1655)
T ss_pred -CHHHHHHHHHHHHHhccc
Confidence 899999999999998654
No 53
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.79 E-value=9.8e-18 Score=179.58 Aligned_cols=62 Identities=16% Similarity=0.212 Sum_probs=52.3
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhhc
Q 008186 497 HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 571 (574)
Q Consensus 497 ~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~~ 571 (574)
.++++|+|+|+|++|.++|++.++.+.+.+++. +++++ ++ ..+.+ .++++.+.|.+||+++.
T Consensus 352 ~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~--~l~~i--~~---~~~~e------~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 352 RRCPTPMLSGYWKNDPFSPEEDSRLIASSSADG--KLLEI--PF---KPVYR------NFDKALQEISDWLEDRL 413 (414)
T ss_pred cCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCC--eEEEc--cC---CCccC------CHHHHHHHHHHHHHHHh
Confidence 579999999999999999999999999999887 77887 33 34433 77999999999998763
No 54
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.79 E-value=5.8e-18 Score=171.95 Aligned_cols=51 Identities=20% Similarity=0.294 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHhc-CCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCC
Q 008186 332 EDVPAAMEYIRAQS-KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 390 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~-g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~ 390 (574)
+|+.+++++++... +.+ +++++||||||.+++.++.. +++|+++|+++|..
T Consensus 83 ~d~~~~~~~l~~~~~g~~--~i~l~G~S~Gg~~a~~~a~~------~~~v~~lil~~p~~ 134 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHLR--RIVAWGLCDAASAALLYAPA------DLRVAGLVLLNPWV 134 (274)
T ss_pred HHHHHHHHHHHhhCCCCC--cEEEEEECHHHHHHHHHhhh------CCCccEEEEECCcc
Confidence 89999999998764 333 79999999999999999865 56899999999864
No 55
>PRK05855 short chain dehydrogenase; Validated
Probab=99.78 E-value=3.1e-18 Score=191.48 Aligned_cols=66 Identities=11% Similarity=0.223 Sum_probs=55.8
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhhcC
Q 008186 496 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 572 (574)
Q Consensus 496 l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~~~ 572 (574)
...+++|+|+|+|++|.++|++..+.+.+.+++. +++++ +++|+.|.+ .|+++.+.|.+|+++...
T Consensus 229 ~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~--~~~~~---~~gH~~~~e------~p~~~~~~i~~fl~~~~~ 294 (582)
T PRK05855 229 ERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRL--WRREI---KAGHWLPMS------HPQVLAAAVAEFVDAVEG 294 (582)
T ss_pred cCCccCceEEEEeCCCcccCHHHhccccccCCcc--eEEEc---cCCCcchhh------ChhHHHHHHHHHHHhccC
Confidence 5568999999999999999999999998888876 77776 457777765 899999999999987653
No 56
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.77 E-value=1e-17 Score=167.71 Aligned_cols=208 Identities=16% Similarity=0.206 Sum_probs=118.7
Q ss_pred ccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhH-HHHHHHHHhcCCCCCchhhcceeEEccCC-CCCCchh-HHHhh
Q 008186 326 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGG-ILLYAMLSRCGFEGRESRLAAIVTLASSL-DYTSSKS-TLKLL 402 (574)
Q Consensus 326 ~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG-~ial~~A~~~~~~~~p~~v~~lVlLap~~-~~~~~~~-~l~~~ 402 (574)
.++++ +|+..+|+..+..+... +++++|||||| .+++..+... |..+.++|++.-.. ....... ....+
T Consensus 102 ~~~ma-~dv~~Fi~~v~~~~~~~--~~~l~GHsmGG~~~~m~~t~~~-----p~~~~rliv~D~sP~~~~~~~~e~~e~i 173 (315)
T KOG2382|consen 102 YEAMA-EDVKLFIDGVGGSTRLD--PVVLLGHSMGGVKVAMAETLKK-----PDLIERLIVEDISPGGVGRSYGEYRELI 173 (315)
T ss_pred HHHHH-HHHHHHHHHcccccccC--CceecccCcchHHHHHHHHHhc-----CcccceeEEEecCCccCCcccchHHHHH
Confidence 33555 99999999987543333 89999999999 5666666654 78899998876333 2222211 11222
Q ss_pred ccccChhhhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCC
Q 008186 403 LPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGG 482 (574)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (574)
..+.......+. ..........+.. ...+..+..|+...+... ..+. ......+...+..+...+..
T Consensus 174 ~~m~~~d~~~~~-~~~rke~~~~l~~-~~~d~~~~~fi~~nl~~~-~~~~--------s~~w~~nl~~i~~~~~~~~~-- 240 (315)
T KOG2382|consen 174 KAMIQLDLSIGV-SRGRKEALKSLIE-VGFDNLVRQFILTNLKKS-PSDG--------SFLWRVNLDSIASLLDEYEI-- 240 (315)
T ss_pred HHHHhccccccc-cccHHHHHHHHHH-HhcchHHHHHHHHhcCcC-CCCC--------ceEEEeCHHHHHHHHHHHHh--
Confidence 222211111000 0001111111100 111112233333222210 0000 00012233333333332210
Q ss_pred cccCCCcccccccc--CCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHH
Q 008186 483 LRDRGGKFFYKDHI--HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVY 560 (574)
Q Consensus 483 ~~~~~~~~~~~~~l--~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~ 560 (574)
..+...+ .....|||++.|.++..++.+.-.++.+.+|+. +++++ ++++|+.|.| .|+++.
T Consensus 241 -------~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~--e~~~l--d~aGHwVh~E------~P~~~~ 303 (315)
T KOG2382|consen 241 -------LSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNV--EVHEL--DEAGHWVHLE------KPEEFI 303 (315)
T ss_pred -------hcccccccccccccceeEEecCCCCCcChhHHHHHHHhccch--heeec--ccCCceeecC------CHHHHH
Confidence 1112222 556789999999999999999999999999987 88888 7799999998 999999
Q ss_pred HHHHHHHhhhc
Q 008186 561 PCIVQFLGRYD 571 (574)
Q Consensus 561 ~~Il~FL~~~~ 571 (574)
+.|.+|+.+++
T Consensus 304 ~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 304 ESISEFLEEPE 314 (315)
T ss_pred HHHHHHhcccC
Confidence 99999998875
No 57
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.74 E-value=7.7e-17 Score=165.25 Aligned_cols=288 Identities=21% Similarity=0.306 Sum_probs=191.6
Q ss_pred EEEEEeCCCCCCCCCCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCcccCCCCCchhhhhhcccchh
Q 008186 94 LALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHGVSE 173 (574)
Q Consensus 94 l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G~S~~~~~~~~~~~~~~~~~~ 173 (574)
+.+.+|.|..+.. -+.|+|++|=+-.....+|++|..|++++|.++|++||.+++++=..+..
T Consensus 93 ~~liqy~p~~e~v-~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---------------- 155 (445)
T COG3243 93 LELIQYKPLTEKV-LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---------------- 155 (445)
T ss_pred hhhhccCCCCCcc-CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh----------------
Confidence 3456677775432 56789999999999999999999999999999999999999987664443
Q ss_pred HHHHhhccCCcCCCccccccccccccccchhhhhHHHHHHhhhhhhccccccccchhhhhhhHHHHHhhhhcccccchhh
Q 008186 174 QMEAVANNSKISPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERLSGFLSENQSKIMSAKLFDQISKLLEDSQLSEGF 253 (574)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (574)
T Consensus 156 -------------------------------------------------------------------------------- 155 (445)
T COG3243 156 -------------------------------------------------------------------------------- 155 (445)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhhHhhhhhhhHHHHHHHhHHHHHHHHhcCcEEeccccchhhhhcccchhHHhhcccceeccCCCccchhhhh
Q 008186 254 NEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEED 333 (574)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~Gy~vi~pdl~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~a~~D 333 (574)
.+++++|+.++
T Consensus 156 ---------------------------------------------------------------------~~~~edYi~e~ 166 (445)
T COG3243 156 ---------------------------------------------------------------------AKNLEDYILEG 166 (445)
T ss_pred ---------------------------------------------------------------------hccHHHHHHHH
Confidence 13466787899
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchh-hcceeEEccCCCCCCchhHHH-----hhccccC
Q 008186 334 VPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESR-LAAIVTLASSLDYTSSKSTLK-----LLLPLAD 407 (574)
Q Consensus 334 l~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~-v~~lVlLap~~~~~~~~~~l~-----~~~~~~~ 407 (574)
+.+.|+.+++.+|.+ ++.++|||+||+++..+++.+ +.+ |++++++.++.++.......- .+..+..
T Consensus 167 l~~aid~v~~itg~~--~InliGyCvGGtl~~~ala~~-----~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~ 239 (445)
T COG3243 167 LSEAIDTVKDITGQK--DINLIGYCVGGTLLAAALALM-----AAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDA 239 (445)
T ss_pred HHHHHHHHHHHhCcc--ccceeeEecchHHHHHHHHhh-----hhcccccceeeecchhhccccccccccCHHHHHHHHh
Confidence 999999999998876 899999999999999999886 444 999999999988766332210 0111111
Q ss_pred hhhhcCCCccchHhHHHHhCCCCCCchhHH-HHHhhhhcccccCCHHHHHHHHhh-cccCCcHHHHHHHHH-HHHcCCcc
Q 008186 408 PAQALNVPVVPLGALLTAAYPLSSSPPYVF-SWLNNLISAEDMMHPELLKKLVLN-NFCTIPAKLILQLTT-AFREGGLR 484 (574)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~ 484 (574)
.....+ ..-+..++..|..++....+. .|+..+........ .+-.+.+ ...+.+.....++.+ .+..+.+.
T Consensus 240 ~i~~~g---~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~---fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~ 313 (445)
T COG3243 240 DIVQKG---ILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLP---FDLLYWNADSTRLPGAAHSEYLRNFYLENRLI 313 (445)
T ss_pred hhhhcc---CCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCc---hhHHHhhCCCccCchHHHHHHHHHHHHhChhh
Confidence 111111 112223333344444433333 33333333332122 2222222 224577777777774 44444444
Q ss_pred cCCCccccc---cccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCccccccc--ccchhhH
Q 008186 485 DRGGKFFYK---DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGG--RMAVEQV 559 (574)
Q Consensus 485 ~~~~~~~~~---~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~--~~~pe~v 559 (574)
. +.+.+. -++.+|+||++++.|++|.++|++.+....+.+++ +++++. ...||...+.+ .+...+.
T Consensus 314 ~--g~~~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g-~~~f~l------~~sGHIa~vVN~p~~~k~~~ 384 (445)
T COG3243 314 R--GGLEVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGG-EVTFVL------SRSGHIAGVVNPPGNAKYQY 384 (445)
T ss_pred c--cceEECCEEechhhcccceEEEeecccccCCHHHHHHHHHhcCC-ceEEEE------ecCceEEEEeCCcchhhhhc
Confidence 3 333332 37899999999999999999999999999999988 556665 46777776666 2222333
Q ss_pred HH----HHHHHHhh
Q 008186 560 YP----CIVQFLGR 569 (574)
Q Consensus 560 ~~----~Il~FL~~ 569 (574)
+. .+..|+.+
T Consensus 385 w~n~~~~~~~Wl~~ 398 (445)
T COG3243 385 WTNLPADAEAWLSG 398 (445)
T ss_pred CCCCcchHHHHHHh
Confidence 33 55666654
No 58
>PRK10566 esterase; Provisional
Probab=99.74 E-value=1.1e-16 Score=159.75 Aligned_cols=64 Identities=19% Similarity=0.173 Sum_probs=48.2
Q ss_pred ccCCC-CCcEEEEEeCCCCCCCHHHHHHHHHhCCCCc----eEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 008186 495 HIHKC-NIPILAIAGDQDLICPPEAVEETVKLLPEDL----VTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 569 (574)
Q Consensus 495 ~l~~I-~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~----~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~ 569 (574)
.+.++ ++|+|+++|++|.++|++.++.+.+.++... +++..+ ++.+|.- . ....+.+.+||++
T Consensus 180 ~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~-----~~~~H~~------~-~~~~~~~~~fl~~ 247 (249)
T PRK10566 180 QLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWE-----PGVRHRI------T-PEALDAGVAFFRQ 247 (249)
T ss_pred hhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEec-----CCCCCcc------C-HHHHHHHHHHHHh
Confidence 45565 6999999999999999999999998886542 355555 5556641 2 3578999999987
Q ss_pred h
Q 008186 570 Y 570 (574)
Q Consensus 570 ~ 570 (574)
+
T Consensus 248 ~ 248 (249)
T PRK10566 248 H 248 (249)
T ss_pred h
Confidence 5
No 59
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.74 E-value=1.7e-16 Score=166.70 Aligned_cols=231 Identities=17% Similarity=0.280 Sum_probs=145.8
Q ss_pred CCCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhh
Q 008186 323 DWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLL 402 (574)
Q Consensus 323 d~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~ 402 (574)
.|++++|+ +-+.++|+++ |. +++++|+|+||.+++.+++.+...+.|..+++++++++++++......+..+
T Consensus 149 ~f~ldDYi-~~l~~~i~~~----G~---~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~ 220 (406)
T TIGR01849 149 KFDLEDYI-DYLIEFIRFL----GP---DIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNEL 220 (406)
T ss_pred CCCHHHHH-HHHHHHHHHh----CC---CCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHH
Confidence 36688887 6777777666 32 5999999999999998888765544456799999999999987754444322
Q ss_pred cccc--------------ChhhhcCCCccchHhHHHHhCCCC---CCchhHHHHHhhhhcccccCCHHHHHHHHh--hcc
Q 008186 403 LPLA--------------DPAQALNVPVVPLGALLTAAYPLS---SSPPYVFSWLNNLISAEDMMHPELLKKLVL--NNF 463 (574)
Q Consensus 403 ~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~ 463 (574)
.... ..+...+...++- .+....|... +......+++..+..... -..+....++. ...
T Consensus 221 a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG-~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~-~~~~~~~~f~~~y~d~ 298 (406)
T TIGR01849 221 AREKPIEWFQHNVIMRVPFPYPGAGRLVYPG-FLQLAGFISMNLDRHTKAHSDFFLHLVKGDG-QEADKHRIFYDEYLAV 298 (406)
T ss_pred hhcccHHHHHHHhhhccCccccCCCCcccCH-HHHHHHHHHcCcchHHHHHHHHHHHHhcCCc-chHHHHHHHHHHhhhc
Confidence 2110 0000011111221 1222222111 111122233333321111 12223333333 234
Q ss_pred cCCcHHHHHHHH-HHHHcCCcccCCCccccc---cccCCCC-CcEEEEEeCCCCCCCHHHHHHHHHh---CCCCceEEEE
Q 008186 464 CTIPAKLILQLT-TAFREGGLRDRGGKFFYK---DHIHKCN-IPILAIAGDQDLICPPEAVEETVKL---LPEDLVTYKV 535 (574)
Q Consensus 464 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~l~~I~-vPvLII~Ge~D~vvp~e~~~~l~~~---lp~a~~~l~i 535 (574)
...+.+.+.++. ..|.+..+.. |.+.+. -++++|+ +|+|.|.|+.|.|+|+..++.+.+. ++..+++..+
T Consensus 299 ~dlpge~y~~~v~~vf~~n~L~~--G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~ 376 (406)
T TIGR01849 299 MDMTAEFYLQTIDVVFQQFLLPQ--GKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHL 376 (406)
T ss_pred cCCcHHHHHHHHHHHHHhCCccC--CcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEee
Confidence 467888888887 4455554443 344333 3789999 9999999999999999988888886 4766655555
Q ss_pred EeCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 008186 536 FGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 536 i~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~ 570 (574)
. ...||++.+.+...++++++.|.+||.++
T Consensus 377 ~-----~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 377 Q-----PGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred c-----CCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 4 67889999999999999999999999864
No 60
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.72 E-value=7e-17 Score=161.29 Aligned_cols=199 Identities=21% Similarity=0.335 Sum_probs=111.0
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhh
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQ 410 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~ 410 (574)
.+|+..++++++...+. .|+..||+|+||.+...+..+.+ ....+.+.+.++.+.+.......++.-..
T Consensus 131 t~D~~~~l~~l~~~~~~--r~~~avG~SLGgnmLa~ylgeeg---~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s------ 199 (345)
T COG0429 131 TEDIRFFLDWLKARFPP--RPLYAVGFSLGGNMLANYLGEEG---DDLPLDAAVAVSAPFDLEACAYRLDSGFS------ 199 (345)
T ss_pred hhHHHHHHHHHHHhCCC--CceEEEEecccHHHHHHHHHhhc---cCcccceeeeeeCHHHHHHHHHHhcCchh------
Confidence 39999999999987554 49999999999977777766532 34567777887777665322211110000
Q ss_pred hcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhccc-----ccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCccc
Q 008186 411 ALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAE-----DMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRD 485 (574)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (574)
. .++++ .+...+......+ ........... ...+.++++...+. ..+.+
T Consensus 200 --------~-~ly~r---------~l~~~L~~~~~~kl~~l~~~~p~~~~~~i-------k~~~ti~eFD~~~T-ap~~G 253 (345)
T COG0429 200 --------L-RLYSR---------YLLRNLKRNAARKLKELEPSLPGTVLAAI-------KRCRTIREFDDLLT-APLHG 253 (345)
T ss_pred --------h-hhhHH---------HHHHHHHHHHHHHHHhcCcccCcHHHHHH-------HhhchHHhccceee-ecccC
Confidence 0 00000 0111111110000 00000000000 01122222222221 12222
Q ss_pred CCCccccc------cccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCccccccccc-chh-
Q 008186 486 RGGKFFYK------DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRM-AVE- 557 (574)
Q Consensus 486 ~~~~~~~~------~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~-~pe- 557 (574)
+.+..+|. ..+.+|++|+|||++.+|++++++...+.....+ ..+.+.+- .|.||.+|+.++. .+.
T Consensus 254 f~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~n-p~v~l~~t-----~~GGHvGfl~~~~~~~~~ 327 (345)
T COG0429 254 FADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLN-PNVLLQLT-----EHGGHVGFLGGKLLHPQM 327 (345)
T ss_pred CCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCC-CceEEEee-----cCCceEEeccCccccchh
Confidence 22333332 3678999999999999999999987766665322 24466664 7999999988644 333
Q ss_pred hHHHHHHHHHhhhcC
Q 008186 558 QVYPCIVQFLGRYDS 572 (574)
Q Consensus 558 ~v~~~Il~FL~~~~~ 572 (574)
+..+.+.+||+....
T Consensus 328 W~~~ri~~~l~~~~~ 342 (345)
T COG0429 328 WLEQRILDWLDPFLE 342 (345)
T ss_pred hHHHHHHHHHHHHHh
Confidence 889999999987643
No 61
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.68 E-value=1.7e-15 Score=156.70 Aligned_cols=198 Identities=22% Similarity=0.310 Sum_probs=107.4
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhh
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQ 410 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~ 410 (574)
.+|+.+++++++.+++.. |++.+|.||||++.+.|+.+.+. ...+.+.+.++.+.+.......+. .
T Consensus 181 t~Dl~~~v~~i~~~~P~a--~l~avG~S~Gg~iL~nYLGE~g~---~~~l~~a~~v~~Pwd~~~~~~~~~--~------- 246 (409)
T KOG1838|consen 181 TEDLREVVNHIKKRYPQA--PLFAVGFSMGGNILTNYLGEEGD---NTPLIAAVAVCNPWDLLAASRSIE--T------- 246 (409)
T ss_pred HHHHHHHHHHHHHhCCCC--ceEEEEecchHHHHHHHhhhccC---CCCceeEEEEeccchhhhhhhHHh--c-------
Confidence 499999999999998766 99999999999999999988532 335677777776655321100000 0
Q ss_pred hcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHH-HHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCc
Q 008186 411 ALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPE-LLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGK 489 (574)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (574)
.....++... +..-+...... +.. ....... .......++++++...+... +..+...
T Consensus 247 ------~~~~~~y~~~---------l~~~l~~~~~~----~r~~~~~~~vd-~d~~~~~~SvreFD~~~t~~-~~gf~~~ 305 (409)
T KOG1838|consen 247 ------PLYRRFYNRA---------LTLNLKRIVLR----HRHTLFEDPVD-FDVILKSRSVREFDEALTRP-MFGFKSV 305 (409)
T ss_pred ------ccchHHHHHH---------HHHhHHHHHhh----hhhhhhhccch-hhhhhhcCcHHHHHhhhhhh-hcCCCcH
Confidence 0000011110 00000000000 000 0000000 00001124455555544422 2222222
Q ss_pred ccc------ccccCCCCCcEEEEEeCCCCCCCHHHH-HHHHHhCCCCceEEEEEeCCCCCCCCcccccccc--cchhhHH
Q 008186 490 FFY------KDHIHKCNIPILAIAGDQDLICPPEAV-EETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGR--MAVEQVY 560 (574)
Q Consensus 490 ~~~------~~~l~~I~vPvLII~Ge~D~vvp~e~~-~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~--~~pe~v~ 560 (574)
.+| ...+.+|++|+|+|.+.+|+++|++.. ....+.-|+ +-+.+ ..|.||++|+.+. +...++.
T Consensus 306 deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~--v~l~~-----T~~GGHlgfleg~~p~~~~w~~ 378 (409)
T KOG1838|consen 306 DEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPN--VLLVI-----TSHGGHLGFLEGLWPSARTWMD 378 (409)
T ss_pred HHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCc--EEEEE-----eCCCceeeeeccCCCccchhHH
Confidence 222 237889999999999999999998642 222222242 24444 4788999988874 4445566
Q ss_pred HHHHHHHhhh
Q 008186 561 PCIVQFLGRY 570 (574)
Q Consensus 561 ~~Il~FL~~~ 570 (574)
+.+.+|+...
T Consensus 379 ~~l~ef~~~~ 388 (409)
T KOG1838|consen 379 KLLVEFLGNA 388 (409)
T ss_pred HHHHHHHHHH
Confidence 6588888653
No 62
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.66 E-value=7.3e-16 Score=145.62 Aligned_cols=200 Identities=16% Similarity=0.204 Sum_probs=125.0
Q ss_pred CCCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhh
Q 008186 323 DWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLL 402 (574)
Q Consensus 323 d~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~ 402 (574)
.|+|.+|+..|+.+.|+.+++..+ ..+.+.||||+||.+.-.+... + ++......+....+...+...+.+
T Consensus 80 ~~~~~DwA~~D~~aal~~~~~~~~--~~P~y~vgHS~GGqa~gL~~~~------~-k~~a~~vfG~gagwsg~m~~~~~l 150 (281)
T COG4757 80 QWRYLDWARLDFPAALAALKKALP--GHPLYFVGHSFGGQALGLLGQH------P-KYAAFAVFGSGAGWSGWMGLRERL 150 (281)
T ss_pred ccchhhhhhcchHHHHHHHHhhCC--CCceEEeeccccceeecccccC------c-ccceeeEeccccccccchhhhhcc
Confidence 466779999999999999998653 3489999999999987655543 3 555555555554544433221111
Q ss_pred ccccChhhhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCC
Q 008186 403 LPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGG 482 (574)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (574)
..+. .+.+.. +.+..|..+ +.. .+...-..+|...+++|.++.+...
T Consensus 151 ~~~~----l~~lv~-----------------p~lt~w~g~-------~p~-----~l~G~G~d~p~~v~RdW~RwcR~p~ 197 (281)
T COG4757 151 GAVL----LWNLVG-----------------PPLTFWKGY-------MPK-----DLLGLGSDLPGTVMRDWARWCRHPR 197 (281)
T ss_pred ccee----eccccc-----------------cchhhcccc-------CcH-----hhcCCCccCcchHHHHHHHHhcCcc
Confidence 1000 000000 001111111 011 1111122567888899999888654
Q ss_pred cccCCC-ccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHH
Q 008186 483 LRDRGG-KFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYP 561 (574)
Q Consensus 483 ~~~~~~-~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~ 561 (574)
+...+- ...+.+.++++++|+..+...+|+.+|+...+.+.+..+++..+...+.+ ..+..||++++... -|..++
T Consensus 198 y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~-~~~~lGH~gyfR~~--~Ealwk 274 (281)
T COG4757 198 YYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPR-AEGPLGHMGYFREP--FEALWK 274 (281)
T ss_pred ccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCc-ccCcccchhhhccc--hHHHHH
Confidence 332222 22356678899999999999999999999999999999998666665522 22367888766422 177888
Q ss_pred HHHHHH
Q 008186 562 CIVQFL 567 (574)
Q Consensus 562 ~Il~FL 567 (574)
.+++|+
T Consensus 275 ~~L~w~ 280 (281)
T COG4757 275 EMLGWF 280 (281)
T ss_pred HHHHhh
Confidence 888886
No 63
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.66 E-value=1.2e-15 Score=138.54 Aligned_cols=41 Identities=29% Similarity=0.437 Sum_probs=36.8
Q ss_pred cEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCcccC
Q 008186 111 PLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSV 156 (574)
Q Consensus 111 p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G~S~ 156 (574)
||||+||++.+...| ..+++.|+++||.|+.+|+||+|.+.
T Consensus 1 ~vv~~HG~~~~~~~~-----~~~~~~l~~~G~~v~~~~~~~~~~~~ 41 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDY-----QPLAEALAEQGYAVVAFDYPGHGDSD 41 (145)
T ss_dssp EEEEECTTTTTTHHH-----HHHHHHHHHTTEEEEEESCTTSTTSH
T ss_pred CEEEECCCCCCHHHH-----HHHHHHHHHCCCEEEEEecCCCCccc
Confidence 589999999988776 37899999999999999999999774
No 64
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.65 E-value=1.9e-14 Score=152.60 Aligned_cols=220 Identities=15% Similarity=0.119 Sum_probs=119.4
Q ss_pred CCccchhhhhHHHHHHHHHHhcCCCCCcEE-EEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCch-h-HHH
Q 008186 324 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLL-AIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSK-S-TLK 400 (574)
Q Consensus 324 ~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~-LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~-~-~l~ 400 (574)
+++++++ +++.++++.+ +.. +++ +|||||||++++.+|.+| |++|+++|++++........ . ...
T Consensus 141 ~t~~d~~-~~~~~ll~~l----gi~--~~~~vvG~SmGG~ial~~a~~~-----P~~v~~lv~ia~~~~~~~~~~~~~~~ 208 (389)
T PRK06765 141 VTILDFV-RVQKELIKSL----GIA--RLHAVMGPSMGGMQAQEWAVHY-----PHMVERMIGVIGNPQNDAWTSVNVLQ 208 (389)
T ss_pred CcHHHHH-HHHHHHHHHc----CCC--CceEEEEECHHHHHHHHHHHHC-----hHhhheEEEEecCCCCChhHHHHHHH
Confidence 5566665 6666666654 443 776 999999999999999997 99999999998765433221 1 111
Q ss_pred hhcc-c-cChhhhcCC---CccchHhH--HHHhC-CCCCCchhHHHHHhhhhccc--c-------cC---CH-HHHHHHH
Q 008186 401 LLLP-L-ADPAQALNV---PVVPLGAL--LTAAY-PLSSSPPYVFSWLNNLISAE--D-------MM---HP-ELLKKLV 459 (574)
Q Consensus 401 ~~~~-~-~~~~~~~~~---~~~~~~~~--~~~~~-~~~~~~~~~~~~l~~~~~~~--~-------~~---~~-~~~~~~~ 459 (574)
.... . ..+.-.-+. ...+...+ ...+. ...... .|+..-+... . .. .- ..+....
T Consensus 209 ~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~----~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~ 284 (389)
T PRK06765 209 NWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDE----HFYETTFPRNASIEVDPYEKVSTLTSFEKEINKAT 284 (389)
T ss_pred HHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCH----HHHHHHcCcCccccccccccccchhhHHHHHHHHH
Confidence 1100 0 110000000 00010000 00000 000000 1111111000 0 00 00 1111111
Q ss_pred hhcccCCcHHHHHHHHHHHHcCCcccCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCC--ceEEEEEe
Q 008186 460 LNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFG 537 (574)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a--~~~l~ii~ 537 (574)
...........+..+.+.+..-..... .-++.+.+.+|++|+|+|+|++|.++|++..+++.+.+++. +.+++++
T Consensus 285 ~~~~~~~Dan~~l~l~~a~~~~d~g~~--~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I- 361 (389)
T PRK06765 285 YRRAELVDANHWLYLAKAVQLFDAGHG--FSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEI- 361 (389)
T ss_pred HHhhhccChhhHHHHHHHHHhcCCccc--cCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEE-
Confidence 112223344455555554432211111 11346678899999999999999999999999999999741 3477877
Q ss_pred CCC-CCCCCcccccccccchhhHHHHHHHHHhh
Q 008186 538 EPS-GPHYAHYDLVGGRMAVEQVYPCIVQFLGR 569 (574)
Q Consensus 538 ~~~-~~h~gH~d~l~~~~~pe~v~~~Il~FL~~ 569 (574)
++ .+|..|.+ .|+++.+.|.+||++
T Consensus 362 -~s~~GH~~~le------~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 362 -ESINGHMAGVF------DIHLFEKKIYEFLNR 387 (389)
T ss_pred -CCCCCcchhhc------CHHHHHHHHHHHHcc
Confidence 42 45555554 899999999999976
No 65
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.65 E-value=5.2e-16 Score=151.24 Aligned_cols=54 Identities=30% Similarity=0.526 Sum_probs=47.4
Q ss_pred hhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccC
Q 008186 329 YLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 389 (574)
Q Consensus 329 ~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~ 389 (574)
+..+|+.+.++++++.++.+ +++++||||||.+++.+|..| |++|+++|+++++
T Consensus 25 ~~~~~~~~~~~~~~~~l~~~--~~~~vG~S~Gg~~~~~~a~~~-----p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 25 YTTDDLAADLEALREALGIK--KINLVGHSMGGMLALEYAAQY-----PERVKKLVLISPP 78 (230)
T ss_dssp HCHHHHHHHHHHHHHHHTTS--SEEEEEETHHHHHHHHHHHHS-----GGGEEEEEEESES
T ss_pred ccHHHHHHHHHHHHHHhCCC--CeEEEEECCChHHHHHHHHHC-----chhhcCcEEEeee
Confidence 34577788888888887776 899999999999999999997 9999999999986
No 66
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.59 E-value=5.8e-14 Score=158.12 Aligned_cols=164 Identities=21% Similarity=0.171 Sum_probs=104.6
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhh
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQ 410 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~ 410 (574)
.+|+.+.++++.+.-..+.+++.+.|||.||.+++..+.. .+.+++.|...+.++......
T Consensus 454 ~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~------~~~f~a~~~~~~~~~~~~~~~------------- 514 (620)
T COG1506 454 LEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATK------TPRFKAAVAVAGGVDWLLYFG------------- 514 (620)
T ss_pred HHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhc------CchhheEEeccCcchhhhhcc-------------
Confidence 3888899997666545566799999999999999999988 448888888777654311000
Q ss_pred hcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCcc
Q 008186 411 ALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKF 490 (574)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (574)
. ... .+. ..++..... .. . ....+. ..
T Consensus 515 ---~----------------~~~----~~~---------~~~~~~~~~---~~-~-~~~~~~----------------~~ 541 (620)
T COG1506 515 ---E----------------STE----GLR---------FDPEENGGG---PP-E-DREKYE----------------DR 541 (620)
T ss_pred ---c----------------cch----hhc---------CCHHHhCCC---cc-c-ChHHHH----------------hc
Confidence 0 000 000 000000000 00 0 000000 00
Q ss_pred ccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCC--CceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 008186 491 FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 568 (574)
Q Consensus 491 ~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~--a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~ 568 (574)
.......+|++|+|+|||++|..||.+.+.++.+.+.. ..++++++ ++.+|. +...++...+.+.+++|++
T Consensus 542 sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~-----p~e~H~--~~~~~~~~~~~~~~~~~~~ 614 (620)
T COG1506 542 SPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVF-----PDEGHG--FSRPENRVKVLKEILDWFK 614 (620)
T ss_pred ChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEe-----CCCCcC--CCCchhHHHHHHHHHHHHH
Confidence 11235788999999999999999999999999887763 45677777 566664 2234566789999999999
Q ss_pred hhcCC
Q 008186 569 RYDSV 573 (574)
Q Consensus 569 ~~~~~ 573 (574)
++...
T Consensus 615 ~~~~~ 619 (620)
T COG1506 615 RHLKQ 619 (620)
T ss_pred HHhcC
Confidence 88653
No 67
>PRK11071 esterase YqiA; Provisional
Probab=99.59 E-value=4.5e-14 Score=135.51 Aligned_cols=55 Identities=18% Similarity=0.078 Sum_probs=42.2
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 008186 499 CNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 568 (574)
Q Consensus 499 I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~ 568 (574)
..+|+++++|++|.++|++.+.++++.. .++++ ++..|.- ...+++.+.|.+|+.
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~-----~~~~~-----~ggdH~f-----~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAAC-----RQTVE-----EGGNHAF-----VGFERYFNQIVDFLG 189 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhc-----ceEEE-----CCCCcch-----hhHHHhHHHHHHHhc
Confidence 6688999999999999999999998853 34455 4555531 244889999999985
No 68
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.58 E-value=1.3e-13 Score=142.31 Aligned_cols=164 Identities=20% Similarity=0.227 Sum_probs=97.2
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhhh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQA 411 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~~ 411 (574)
.|...++++++.....+..++.+.|.|+||.+++.+|+. .++|++++...|...-...
T Consensus 157 ~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaL------d~rv~~~~~~vP~l~d~~~---------------- 214 (320)
T PF05448_consen 157 LDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL------DPRVKAAAADVPFLCDFRR---------------- 214 (320)
T ss_dssp HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH------SST-SEEEEESESSSSHHH----------------
T ss_pred HHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHh------CccccEEEecCCCccchhh----------------
Confidence 788889999988766666799999999999999999998 7789999998875421000
Q ss_pred cCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCccc
Q 008186 412 LNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFF 491 (574)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (574)
.+..... ......+..|+...-. ..+ ...+....+. .+|
T Consensus 215 ----------~~~~~~~-~~~y~~~~~~~~~~d~-----~~~----------------~~~~v~~~L~---------Y~D 253 (320)
T PF05448_consen 215 ----------ALELRAD-EGPYPEIRRYFRWRDP-----HHE----------------REPEVFETLS---------YFD 253 (320)
T ss_dssp ----------HHHHT---STTTHHHHHHHHHHSC-----THC----------------HHHHHHHHHH---------TT-
T ss_pred ----------hhhcCCc-cccHHHHHHHHhccCC-----Ccc----------------cHHHHHHHHh---------hhh
Confidence 0000000 0000011111110000 000 0011111111 223
Q ss_pred cccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 008186 492 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 492 ~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~ 570 (574)
...-.++|+||+++-.|-.|.+|||......++.++. .+++.++ +.++|.. .++.-.+..++||.+|
T Consensus 254 ~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~-~K~l~vy-----p~~~He~------~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 254 AVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG-PKELVVY-----PEYGHEY------GPEFQEDKQLNFLKEH 320 (320)
T ss_dssp HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S-SEEEEEE-----TT--SST------THHHHHHHHHHHHHH-
T ss_pred HHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC-CeeEEec-----cCcCCCc------hhhHHHHHHHHHHhcC
Confidence 3445788999999999999999999999999999986 5789888 7777753 2333388999999875
No 69
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.56 E-value=4.8e-14 Score=136.81 Aligned_cols=142 Identities=20% Similarity=0.242 Sum_probs=102.1
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhhh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQA 411 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~~ 411 (574)
+|+.++.+++++.+| +..+++|+|+|+|...++.+|+++ + ++++|+.+|....
T Consensus 113 ~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~-----~--~~alVL~SPf~S~------------------- 165 (258)
T KOG1552|consen 113 ADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRY-----P--LAAVVLHSPFTSG------------------- 165 (258)
T ss_pred hhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcC-----C--cceEEEeccchhh-------------------
Confidence 899999999999997 556999999999999999999984 4 9999999886421
Q ss_pred cCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCccc
Q 008186 412 LNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFF 491 (574)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (574)
.+.+++.... . .+.. .+.
T Consensus 166 -----------~rv~~~~~~~--------------------------------------~-~~~d------------~f~ 183 (258)
T KOG1552|consen 166 -----------MRVAFPDTKT--------------------------------------T-YCFD------------AFP 183 (258)
T ss_pred -----------hhhhccCcce--------------------------------------E-Eeec------------ccc
Confidence 0000000000 0 0000 111
Q ss_pred cccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhhc
Q 008186 492 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 571 (574)
Q Consensus 492 ~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~~ 571 (574)
..+.++.|+|||||+||++|.++|..+...+.+..++. ++-.++ .+.+|.+.. ...++.+.+..|+..-+
T Consensus 184 ~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~-~epl~v-----~g~gH~~~~----~~~~yi~~l~~f~~~~~ 253 (258)
T KOG1552|consen 184 NIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEK-VEPLWV-----KGAGHNDIE----LYPEYIEHLRRFISSVL 253 (258)
T ss_pred ccCcceeccCCEEEEecccCceecccccHHHHHhcccc-CCCcEE-----ecCCCcccc----cCHHHHHHHHHHHHHhc
Confidence 13457889999999999999999999999999999874 344444 466776642 44678888999887654
Q ss_pred C
Q 008186 572 S 572 (574)
Q Consensus 572 ~ 572 (574)
.
T Consensus 254 ~ 254 (258)
T KOG1552|consen 254 P 254 (258)
T ss_pred c
Confidence 3
No 70
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.55 E-value=2.6e-14 Score=143.60 Aligned_cols=57 Identities=19% Similarity=0.294 Sum_probs=47.0
Q ss_pred ccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 326 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 326 ~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
++.+. +|+.+++++++.. +.. +++++||||||.+++.++.++ ++.+.++|+++|...
T Consensus 79 ~~~~~-~Dv~~ai~~L~~~-~~~--~v~LvG~SmGG~vAl~~A~~~-----p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 79 WDVWK-EDVAAAYRWLIEQ-GHP--PVTLWGLRLGALLALDAANPL-----AAKCNRLVLWQPVVS 135 (266)
T ss_pred HHHHH-HHHHHHHHHHHhc-CCC--CEEEEEECHHHHHHHHHHHhC-----ccccceEEEeccccc
Confidence 33555 8999999998765 333 899999999999999999886 788999999998653
No 71
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.55 E-value=5.3e-14 Score=131.59 Aligned_cols=152 Identities=23% Similarity=0.428 Sum_probs=106.1
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhhh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQA 411 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~~ 411 (574)
-|..++|+++..+...+..|++|.|.|+||++++.+|++. .+++.++++-+.....+.. ..+..
T Consensus 131 lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~-----~~ri~~~ivENTF~SIp~~------~i~~v----- 194 (300)
T KOG4391|consen 131 LDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKN-----SDRISAIIVENTFLSIPHM------AIPLV----- 194 (300)
T ss_pred ccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccc-----hhheeeeeeechhccchhh------hhhee-----
Confidence 6788899999887666666999999999999999999984 7788888886654322110 00000
Q ss_pred cCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHH-HHHcCCcccCCCcc
Q 008186 412 LNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTT-AFREGGLRDRGGKF 490 (574)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 490 (574)
++. ..+.+.. + +.. .+.
T Consensus 195 ---------------~p~------~~k~i~~---------------l---------------c~kn~~~----------- 212 (300)
T KOG4391|consen 195 ---------------FPF------PMKYIPL---------------L---------------CYKNKWL----------- 212 (300)
T ss_pred ---------------ccc------hhhHHHH---------------H---------------HHHhhhc-----------
Confidence 000 0000000 0 000 000
Q ss_pred ccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 008186 491 FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 491 ~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~ 570 (574)
-...+.+.++|.|++.|.+|.+|||-..+.+++..|...+++.++ +.+.|.|.+ .-+-.++.|.+||.+.
T Consensus 213 -S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eF-----P~gtHNDT~----i~dGYfq~i~dFlaE~ 282 (300)
T KOG4391|consen 213 -SYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEF-----PDGTHNDTW----ICDGYFQAIEDFLAEV 282 (300)
T ss_pred -chhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeC-----CCCccCceE----EeccHHHHHHHHHHHh
Confidence 011245667899999999999999999999999999988888887 777887765 3366999999999876
Q ss_pred c
Q 008186 571 D 571 (574)
Q Consensus 571 ~ 571 (574)
.
T Consensus 283 ~ 283 (300)
T KOG4391|consen 283 V 283 (300)
T ss_pred c
Confidence 4
No 72
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.54 E-value=4.7e-14 Score=130.62 Aligned_cols=176 Identities=18% Similarity=0.252 Sum_probs=110.1
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHH-HhhccccChhh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTL-KLLLPLADPAQ 410 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l-~~~~~~~~~~~ 410 (574)
+|..++++..+.. +-.++.++|+|-||..++..|+++ ++.|.++|+.++........... +-+.
T Consensus 99 ~Da~~avdLM~aL---k~~~fsvlGWSdGgiTalivAak~-----~e~v~rmiiwga~ayvn~~~~ma~kgiR------- 163 (277)
T KOG2984|consen 99 KDAEYAVDLMEAL---KLEPFSVLGWSDGGITALIVAAKG-----KEKVNRMIIWGAAAYVNHLGAMAFKGIR------- 163 (277)
T ss_pred HhHHHHHHHHHHh---CCCCeeEeeecCCCeEEEEeeccC-----hhhhhhheeecccceecchhHHHHhchH-------
Confidence 5555555544432 112899999999999999999997 89999999998765433321110 1100
Q ss_pred hcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcc-cccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccC-CC
Q 008186 411 ALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISA-EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDR-GG 488 (574)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 488 (574)
.+..|....... .....++.+... ...|.+... .|..+ ++
T Consensus 164 ------------------------dv~kWs~r~R~P~e~~Yg~e~f~~~------------wa~wvD~v~--qf~~~~dG 205 (277)
T KOG2984|consen 164 ------------------------DVNKWSARGRQPYEDHYGPETFRTQ------------WAAWVDVVD--QFHSFCDG 205 (277)
T ss_pred ------------------------HHhhhhhhhcchHHHhcCHHHHHHH------------HHHHHHHHH--HHhhcCCC
Confidence 011111110000 000011111111 111111111 11111 12
Q ss_pred ccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 008186 489 KFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 568 (574)
Q Consensus 489 ~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~ 568 (574)
.+ .+..+.+|+||+||++|+.|++|+..++.-+....+.+ ++.+. ++++|..|+- -+++|+..+.+||+
T Consensus 206 ~f-Cr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a--~~~~~--peGkHn~hLr------ya~eFnklv~dFl~ 274 (277)
T KOG2984|consen 206 RF-CRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLA--KVEIH--PEGKHNFHLR------YAKEFNKLVLDFLK 274 (277)
T ss_pred ch-HhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccc--eEEEc--cCCCcceeee------chHHHHHHHHHHHh
Confidence 32 34578999999999999999999999999999998988 77887 8889999986 57999999999998
Q ss_pred hhc
Q 008186 569 RYD 571 (574)
Q Consensus 569 ~~~ 571 (574)
..+
T Consensus 275 ~~~ 277 (277)
T KOG2984|consen 275 STE 277 (277)
T ss_pred ccC
Confidence 753
No 73
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.52 E-value=7.5e-14 Score=135.51 Aligned_cols=71 Identities=28% Similarity=0.415 Sum_probs=48.8
Q ss_pred cccceeeecCCCceEEEEEeCCCCCCCCCCCcEEEecccccCceeeecCCCCcHHHHhhhC-CceEEEEeccCCcccCCC
Q 008186 80 DELHYVSVANCDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQ-GFDTWILEVRGAGLSVRG 158 (574)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~-g~~v~~~d~rg~G~S~~~ 158 (574)
||-.-|+++++...+..|.-.|+ .+.++.++|+||.|.++..|- .||..+... -.+|+++|+||||.+.-.
T Consensus 48 dekedv~i~~~~~t~n~Y~t~~~---~t~gpil~l~HG~G~S~LSfA-----~~a~el~s~~~~r~~a~DlRgHGeTk~~ 119 (343)
T KOG2564|consen 48 DEKEDVSIDGSDLTFNVYLTLPS---ATEGPILLLLHGGGSSALSFA-----IFASELKSKIRCRCLALDLRGHGETKVE 119 (343)
T ss_pred ccccccccCCCcceEEEEEecCC---CCCccEEEEeecCcccchhHH-----HHHHHHHhhcceeEEEeeccccCccccC
Confidence 44555666655555666655554 123455899999999998884 566665543 457889999999998854
No 74
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.51 E-value=6.3e-13 Score=129.62 Aligned_cols=163 Identities=25% Similarity=0.311 Sum_probs=105.7
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhh
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQ 410 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~ 410 (574)
.+|+.++++++.++...+.+++.++|||+||.+++.++..+ ++.++++|..++..++.........
T Consensus 45 ~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~-----~~~f~a~v~~~g~~d~~~~~~~~~~--------- 110 (213)
T PF00326_consen 45 VDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQH-----PDRFKAAVAGAGVSDLFSYYGTTDI--------- 110 (213)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHT-----CCGSSEEEEESE-SSTTCSBHHTCC---------
T ss_pred hhhHHHHHHHHhccccccceeEEEEcccccccccchhhccc-----ceeeeeeeccceecchhcccccccc---------
Confidence 49999999999888777777999999999999999999975 8899999999987765332110000
Q ss_pred hcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCcc
Q 008186 411 ALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKF 490 (574)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (574)
+ ...+...... . ...++.++ .+..
T Consensus 111 --------~----------------~~~~~~~~~~-~-~~~~~~~~----------------~~s~-------------- 134 (213)
T PF00326_consen 111 --------Y----------------TKAEYLEYGD-P-WDNPEFYR----------------ELSP-------------- 134 (213)
T ss_dssp --------H----------------HHGHHHHHSS-T-TTSHHHHH----------------HHHH--------------
T ss_pred --------c----------------ccccccccCc-c-chhhhhhh----------------hhcc--------------
Confidence 0 0000000000 0 00111111 1110
Q ss_pred ccccccCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhCCCC--ceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHH
Q 008186 491 FYKDHIHK--CNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQF 566 (574)
Q Consensus 491 ~~~~~l~~--I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a--~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~F 566 (574)
...+.+ +++|+||++|++|.+||++.+.++.+.+... ..++.++ ++.+|. +...+....+.+.+.+|
T Consensus 135 --~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~-----p~~gH~--~~~~~~~~~~~~~~~~f 205 (213)
T PF00326_consen 135 --ISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIF-----PGEGHG--FGNPENRRDWYERILDF 205 (213)
T ss_dssp --GGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEE-----TT-SSS--TTSHHHHHHHHHHHHHH
T ss_pred --ccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEc-----CcCCCC--CCCchhHHHHHHHHHHH
Confidence 122344 7899999999999999999998888876532 4577777 555551 22223556889999999
Q ss_pred HhhhcC
Q 008186 567 LGRYDS 572 (574)
Q Consensus 567 L~~~~~ 572 (574)
|+++.+
T Consensus 206 ~~~~l~ 211 (213)
T PF00326_consen 206 FDKYLK 211 (213)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 998764
No 75
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.50 E-value=3.2e-13 Score=131.81 Aligned_cols=54 Identities=15% Similarity=0.142 Sum_probs=47.2
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 390 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~ 390 (574)
.|+..+++++..+++.+.++++++||||||.+++.++..+ ++.+.+++.+++..
T Consensus 77 ~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~-----p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 77 ESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTY-----PDVFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhC-----chhheEEEeecCCc
Confidence 7788889998888777777999999999999999999986 88899998888754
No 76
>PRK11460 putative hydrolase; Provisional
Probab=99.47 E-value=1.5e-12 Score=128.95 Aligned_cols=52 Identities=15% Similarity=0.210 Sum_probs=39.0
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEcc
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLAS 388 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap 388 (574)
+.+.+.++++..+.+.+..+++++||||||.+++.++..+ +..+.++|.+++
T Consensus 85 ~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~-----~~~~~~vv~~sg 136 (232)
T PRK11460 85 PTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAE-----PGLAGRVIAFSG 136 (232)
T ss_pred HHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhC-----CCcceEEEEecc
Confidence 5566667777777676666899999999999999998874 555566666543
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.47 E-value=3.8e-12 Score=129.37 Aligned_cols=66 Identities=21% Similarity=0.371 Sum_probs=45.1
Q ss_pred CCCceEEEEEeCCCCCCCCCCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEec--cCCcccC
Q 008186 89 NCDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEV--RGAGLSV 156 (574)
Q Consensus 89 ~~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~--rg~G~S~ 156 (574)
..+..+.+..|.|+.......+.|+|+||++.+...|... ..+...+.+.||.|+++|. ||+|.+.
T Consensus 22 ~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~--~~~~~la~~~g~~Vv~Pd~~~~g~~~~~ 89 (275)
T TIGR02821 22 TCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIK--AGAQRFAAEHGLALVAPDTSPRGTGIAG 89 (275)
T ss_pred ccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhh--hHHHHHHhhcCcEEEEeCCCCCcCCCCC
Confidence 4567777888999753222345589999999988777432 1233445567999999998 6666544
No 78
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.46 E-value=7.6e-13 Score=128.19 Aligned_cols=159 Identities=21% Similarity=0.274 Sum_probs=103.5
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhhh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQA 411 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~~ 411 (574)
.|+..+++.+......+.+++.+.|.|+||.+++..++. .+++++++..-|...--.-
T Consensus 158 ~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal------~~rik~~~~~~Pfl~df~r---------------- 215 (321)
T COG3458 158 LDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAAL------DPRIKAVVADYPFLSDFPR---------------- 215 (321)
T ss_pred HHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhc------Chhhhcccccccccccchh----------------
Confidence 778888888877766777799999999999999999987 8899999988775431110
Q ss_pred cCCCccchHhHHHHhCCCCCCc--hhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCc
Q 008186 412 LNVPVVPLGALLTAAYPLSSSP--PYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGK 489 (574)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (574)
........ ..+..+++.. ++. ..+.+ .-.. .
T Consensus 216 --------------~i~~~~~~~ydei~~y~k~h-------~~~-------------e~~v~-~TL~------------y 248 (321)
T COG3458 216 --------------AIELATEGPYDEIQTYFKRH-------DPK-------------EAEVF-ETLS------------Y 248 (321)
T ss_pred --------------heeecccCcHHHHHHHHHhc-------Cch-------------HHHHH-HHHh------------h
Confidence 00000000 0111112111 110 00000 0000 1
Q ss_pred cccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 008186 490 FFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 569 (574)
Q Consensus 490 ~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~ 569 (574)
++......+|++|+|+..|-.|++|||...-..++.++. .+++.++ +..+|.+ -|.-..+.+..|++.
T Consensus 249 fD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~-~K~i~iy-----~~~aHe~------~p~~~~~~~~~~l~~ 316 (321)
T COG3458 249 FDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT-SKTIEIY-----PYFAHEG------GPGFQSRQQVHFLKI 316 (321)
T ss_pred hhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccC-CceEEEe-----ecccccc------CcchhHHHHHHHHHh
Confidence 223334678999999999999999999999999999986 5678887 6677865 455566667777765
Q ss_pred hc
Q 008186 570 YD 571 (574)
Q Consensus 570 ~~ 571 (574)
..
T Consensus 317 l~ 318 (321)
T COG3458 317 LF 318 (321)
T ss_pred hc
Confidence 43
No 79
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.45 E-value=1.3e-12 Score=127.26 Aligned_cols=67 Identities=25% Similarity=0.507 Sum_probs=52.2
Q ss_pred ccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 008186 493 KDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 568 (574)
Q Consensus 493 ~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~ 568 (574)
.....++++|+++++|++|.+.|......+.+.++. ..++.++ ++++|..|.+ .|+.+.+.+.+|+.
T Consensus 214 ~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~-~~~~~~~--~~~gH~~~~~------~p~~~~~~i~~~~~ 280 (282)
T COG0596 214 RAALARITVPTLIIHGEDDPVVPAELARRLAAALPN-DARLVVI--PGAGHFPHLE------APEAFAAALLAFLE 280 (282)
T ss_pred chhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCC-CceEEEe--CCCCCcchhh------cHHHHHHHHHHHHh
Confidence 345778889999999999977777666777778775 2377777 6777888876 78889988888554
No 80
>PLN00021 chlorophyllase
Probab=99.45 E-value=2.5e-12 Score=132.60 Aligned_cols=53 Identities=21% Similarity=0.170 Sum_probs=40.9
Q ss_pred EEEEEeCCCCCCCCCCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCc
Q 008186 94 LALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAG 153 (574)
Q Consensus 94 l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G 153 (574)
+.++.|.|.... ..++||++||++.+...| ..++++|+++||.|+++|++|++
T Consensus 39 ~p~~v~~P~~~g--~~PvVv~lHG~~~~~~~y-----~~l~~~Las~G~~VvapD~~g~~ 91 (313)
T PLN00021 39 KPLLVATPSEAG--TYPVLLFLHGYLLYNSFY-----SQLLQHIASHGFIVVAPQLYTLA 91 (313)
T ss_pred ceEEEEeCCCCC--CCCEEEEECCCCCCcccH-----HHHHHHHHhCCCEEEEecCCCcC
Confidence 456668786421 245589999999877655 36899999999999999999865
No 81
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.44 E-value=4.1e-12 Score=141.59 Aligned_cols=55 Identities=20% Similarity=0.126 Sum_probs=45.8
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
+|+.++|+++..+. ...+++.++|||+||.+++.+|..+ ++.++++|..++..+.
T Consensus 80 ~D~~~~i~~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~~-----~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 80 ADGYDLVDWIAKQP-WCDGNVGMLGVSYLAVTQLLAAVLQ-----PPALRAIAPQEGVWDL 134 (550)
T ss_pred hHHHHHHHHHHhCC-CCCCcEEEEEeChHHHHHHHHhccC-----CCceeEEeecCcccch
Confidence 89999999998763 2234899999999999999999885 7889999988876543
No 82
>PLN02442 S-formylglutathione hydrolase
Probab=99.44 E-value=1.1e-11 Score=126.53 Aligned_cols=57 Identities=18% Similarity=0.302 Sum_probs=43.7
Q ss_pred chhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 328 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 328 ~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
++..+++...++......+ ..+++++||||||..++.++.++ |+.+++++++++..+
T Consensus 123 ~~~~~~l~~~i~~~~~~~~--~~~~~i~G~S~GG~~a~~~a~~~-----p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 123 DYVVKELPKLLSDNFDQLD--TSRASIFGHSMGGHGALTIYLKN-----PDKYKSVSAFAPIAN 179 (283)
T ss_pred hhHHHHHHHHHHHHHHhcC--CCceEEEEEChhHHHHHHHHHhC-----chhEEEEEEECCccC
Confidence 4445666666666543333 34899999999999999999997 889999999988754
No 83
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.44 E-value=1.6e-11 Score=125.13 Aligned_cols=220 Identities=18% Similarity=0.189 Sum_probs=124.3
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEE-EEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccc---c
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLL-AIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPL---A 406 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~-LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~---~ 406 (574)
..|...+-..+...+|++ ++. +||-||||+.++.++..| |++|.++|.|++..........+....+- .
T Consensus 129 i~D~V~aq~~ll~~LGI~--~l~avvGgSmGGMqaleWa~~y-----Pd~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~ 201 (368)
T COG2021 129 IRDMVRAQRLLLDALGIK--KLAAVVGGSMGGMQALEWAIRY-----PDRVRRAIPIATAARLSAQNIAFNEVQRQAIEA 201 (368)
T ss_pred HHHHHHHHHHHHHhcCcc--eEeeeeccChHHHHHHHHHHhC-----hHHHhhhheecccccCCHHHHHHHHHHHHHHHh
Confidence 355555556666677776 776 999999999999999998 99999999999876554433333221111 1
Q ss_pred ChhhhcC-----C---CccchHhHHHHhCCCCCCchhHHHHHhhhh-ccccc--CCHHHHHHHHh----hcccCCcHHHH
Q 008186 407 DPAQALN-----V---PVVPLGALLTAAYPLSSSPPYVFSWLNNLI-SAEDM--MHPELLKKLVL----NNFCTIPAKLI 471 (574)
Q Consensus 407 ~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~--~~~~~~~~~~~----~~~~~~~~~~~ 471 (574)
++.-.-+ . ..+....++..+ .... ...+.+.+.... ..+.. .....++.+.. .......+..+
T Consensus 202 DP~~n~G~Y~~~~~P~~GL~~AR~l~~l-tYrS-~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsY 279 (368)
T COG2021 202 DPDWNGGDYYEGTQPERGLRLARMLAHL-TYRS-EEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSY 279 (368)
T ss_pred CCCccCCCccCCCCcchhHHHHHHHHHH-HccC-HHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchH
Confidence 1111001 0 011111111100 0000 111111111100 00000 01112222211 22234555666
Q ss_pred HHHHHHHHcCCcccCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccc
Q 008186 472 LQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVG 551 (574)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~ 551 (574)
..+.+.+........ .-+..+.+++|++|+|++.=+.|.+.|++..+++.+.++.+.. +++| . ..+||..|+.
T Consensus 280 L~lt~ald~~D~s~~--~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i---~-S~~GHDaFL~ 352 (368)
T COG2021 280 LYLTRALDYHDVSRG--RGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREI---D-SPYGHDAFLV 352 (368)
T ss_pred HHHHHHHHhcCCCCC--cCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEe---c-CCCCchhhhc
Confidence 666665543222211 1233456899999999999999999999999999999998753 6666 2 3448888775
Q ss_pred cccchhhHHHHHHHHHhh
Q 008186 552 GRMAVEQVYPCIVQFLGR 569 (574)
Q Consensus 552 ~~~~pe~v~~~Il~FL~~ 569 (574)
..+.+.+.|..||+.
T Consensus 353 ---e~~~~~~~i~~fL~~ 367 (368)
T COG2021 353 ---ESEAVGPLIRKFLAL 367 (368)
T ss_pred ---chhhhhHHHHHHhhc
Confidence 456688999999875
No 84
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.39 E-value=4.3e-12 Score=118.99 Aligned_cols=48 Identities=15% Similarity=0.234 Sum_probs=38.7
Q ss_pred CCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCcccCCC
Q 008186 108 RNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSVRG 158 (574)
Q Consensus 108 ~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G~S~~~ 158 (574)
.+..++|+||+-.+...-. ...+|..+.+.|+-++.+|.+|.|.|...
T Consensus 32 s~e~vvlcHGfrS~Kn~~~---~~~vA~~~e~~gis~fRfDF~GnGeS~gs 79 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAII---MKNVAKALEKEGISAFRFDFSGNGESEGS 79 (269)
T ss_pred CceEEEEeeccccccchHH---HHHHHHHHHhcCceEEEEEecCCCCcCCc
Confidence 3567999999988653322 24689999999999999999999999853
No 85
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.39 E-value=1.3e-12 Score=127.96 Aligned_cols=194 Identities=24% Similarity=0.339 Sum_probs=122.5
Q ss_pred hhHhhhhhhhHHHHHHHhHHHHHHHHhcCcEEeccccchhhh-hcc---cchhHHhhcccceeccCCCccchhhhhHHHH
Q 008186 262 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQE-RLF---STIDDFQKQLDLIVQYDWDFDHYLEEDVPAA 337 (574)
Q Consensus 262 ~~~~~~~~~~i~~~~~~~~~~l~~~~~~Gy~vi~pdl~~~~~-~~~---~~~~~~~~~~~~~~~~d~s~~~~a~~Dl~a~ 337 (574)
.+|-++.-.+++++++.++++| ++.||.|+.||+|+... ... .....+.... .+. .+.. ..|+.++
T Consensus 16 ~Vvv~~d~~G~~~~~~~~ad~l---A~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~-~~~~~aa 85 (218)
T PF01738_consen 16 AVVVIHDIFGLNPNIRDLADRL---AEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELF-----APR-PEQV-AADLQAA 85 (218)
T ss_dssp EEEEE-BTTBS-HHHHHHHHHH---HHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCH-----HHS-HHHH-HHHHHHH
T ss_pred EEEEEcCCCCCchHHHHHHHHH---HhcCCCEEecccccCCCCCccchhhHHHHHHHHH-----hhh-HHHH-HHHHHHH
Confidence 3444556788899999999999 99999999999999766 111 1111111100 011 2333 4889999
Q ss_pred HHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhhhcCCCcc
Q 008186 338 MEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVV 417 (574)
Q Consensus 338 Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 417 (574)
+++++.....+.+++.++|+||||.+++.++.. .+.+++.|..-|.....
T Consensus 86 ~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~------~~~~~a~v~~yg~~~~~------------------------ 135 (218)
T PF01738_consen 86 VDYLRAQPEVDPGKIGVVGFCWGGKLALLLAAR------DPRVDAAVSFYGGSPPP------------------------ 135 (218)
T ss_dssp HHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCC------TTTSSEEEEES-SSSGG------------------------
T ss_pred HHHHHhccccCCCcEEEEEEecchHHhhhhhhh------ccccceEEEEcCCCCCC------------------------
Confidence 999988754445699999999999999999876 46788888766511000
Q ss_pred chHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCccccccccC
Q 008186 418 PLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIH 497 (574)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 497 (574)
...+...
T Consensus 136 -------------------------------------------------------------------------~~~~~~~ 142 (218)
T PF01738_consen 136 -------------------------------------------------------------------------PPLEDAP 142 (218)
T ss_dssp -------------------------------------------------------------------------GHHHHGG
T ss_pred -------------------------------------------------------------------------cchhhhc
Confidence 0012356
Q ss_pred CCCCcEEEEEeCCCCCCCHHHHHHHHHhC--CCCceEEEEEeCCCCCCCCccccc--ccccchhhHHHHHHHHHhhh
Q 008186 498 KCNIPILAIAGDQDLICPPEAVEETVKLL--PEDLVTYKVFGEPSGPHYAHYDLV--GGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 498 ~I~vPvLII~Ge~D~vvp~e~~~~l~~~l--p~a~~~l~ii~~~~~~h~gH~d~l--~~~~~pe~v~~~Il~FL~~~ 570 (574)
++++|+++++|++|+.+|.+..+.+.+.+ .+...+++++ ++.+|.-...-- ....+.++.++.+++||+++
T Consensus 143 ~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y--~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 143 KIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVY--PGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp G--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEE--TT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred ccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEEC--CCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 68899999999999999999888888776 2335688888 444443322211 12235578899999999986
No 86
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.38 E-value=7.1e-12 Score=124.17 Aligned_cols=197 Identities=19% Similarity=0.256 Sum_probs=139.3
Q ss_pred hHhhhhhhhHHHHHHHhHHHHHHHHhcCcEEeccccchhhhhcccch--hHHhhcccceeccCCCccchhhhhHHHHHHH
Q 008186 263 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTI--DDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 340 (574)
Q Consensus 263 ~~~~~~~~~i~~~~~~~~~~l~~~~~~Gy~vi~pdl~~~~~~~~~~~--~~~~~~~~~~~~~d~s~~~~a~~Dl~a~Id~ 340 (574)
++-.+.-.++++++++++++| +.+||.|++||+|.++++..... ....... .....+..+. ..|+.+.+++
T Consensus 30 VIv~hei~Gl~~~i~~~a~rl---A~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~d~~a~~~~ 102 (236)
T COG0412 30 VIVLHEIFGLNPHIRDVARRL---AKAGYVVLAPDLYGRQGDPTDIEDEPAELETG---LVERVDPAEV-LADIDAALDY 102 (236)
T ss_pred EEEEecccCCchHHHHHHHHH---HhCCcEEEechhhccCCCCCcccccHHHHhhh---hhccCCHHHH-HHHHHHHHHH
Confidence 445567789999999999999 99999999999999888744222 2122211 1111223454 4999999999
Q ss_pred HHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhhhcCCCccchH
Q 008186 341 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLG 420 (574)
Q Consensus 341 l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 420 (574)
+..+...+..++.++|+||||.+++.++.. .+.+++.|..-+.....
T Consensus 103 L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~------~~~v~a~v~fyg~~~~~--------------------------- 149 (236)
T COG0412 103 LARQPQVDPKRIGVVGFCMGGGLALLAATR------APEVKAAVAFYGGLIAD--------------------------- 149 (236)
T ss_pred HHhCCCCCCceEEEEEEcccHHHHHHhhcc------cCCccEEEEecCCCCCC---------------------------
Confidence 988753455589999999999999999987 44788888755432100
Q ss_pred hHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCccccccccCCCC
Q 008186 421 ALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN 500 (574)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 500 (574)
......+++
T Consensus 150 -----------------------------------------------------------------------~~~~~~~~~ 158 (236)
T COG0412 150 -----------------------------------------------------------------------DTADAPKIK 158 (236)
T ss_pred -----------------------------------------------------------------------ccccccccc
Confidence 011246788
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhCCCC--ceEEEEEeCCCCCCCCccc-----ccccccchhhHHHHHHHHHhhhcC
Q 008186 501 IPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYD-----LVGGRMAVEQVYPCIVQFLGRYDS 572 (574)
Q Consensus 501 vPvLII~Ge~D~vvp~e~~~~l~~~lp~a--~~~l~ii~~~~~~h~gH~d-----~l~~~~~pe~v~~~Il~FL~~~~~ 572 (574)
+|+|++.|+.|..+|.+....+.+.+... .+++.++ ++..|.-..+ .-......+..++.+.+||+++..
T Consensus 159 ~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y--~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 159 VPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIY--PGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEe--CCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999888888877665 5677777 3333333311 122234567889999999998753
No 87
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.32 E-value=2.3e-11 Score=127.14 Aligned_cols=160 Identities=21% Similarity=0.319 Sum_probs=86.0
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhhhcCC
Q 008186 335 PAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 414 (574)
Q Consensus 335 ~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~~~~~ 414 (574)
.++++++...--.+..++.++|.|+||+++.++|..+ +++++++|.+++++...-+... ... ..
T Consensus 246 ~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le-----~~RlkavV~~Ga~vh~~ft~~~--~~~---------~~ 309 (411)
T PF06500_consen 246 QAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE-----DPRLKAVVALGAPVHHFFTDPE--WQQ---------RV 309 (411)
T ss_dssp HHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT-----TTT-SEEEEES---SCGGH-HH--HHT---------TS
T ss_pred HHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc-----ccceeeEeeeCchHhhhhccHH--HHh---------cC
Confidence 3567777665444555899999999999999999764 7899999999998643111000 000 00
Q ss_pred CccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCcccccc
Q 008186 415 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKD 494 (574)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (574)
+....+.+...++... .+.+.+.... . .+....
T Consensus 310 ------------------P~my~d~LA~rlG~~~-~~~~~l~~el-------------------~---------~~SLk~ 342 (411)
T PF06500_consen 310 ------------------PDMYLDVLASRLGMAA-VSDESLRGEL-------------------N---------KFSLKT 342 (411)
T ss_dssp -------------------HHHHHHHHHHCT-SC-E-HHHHHHHG-------------------G---------GGSTTT
T ss_pred ------------------CHHHHHHHHHHhCCcc-CCHHHHHHHH-------------------H---------hcCcch
Confidence 0001111222211110 1121111110 0 111111
Q ss_pred --cc--CCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 008186 495 --HI--HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 495 --~l--~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~ 570 (574)
-+ .+.++|+|.+.|++|+++|.+..+-+...-.+. +...+ + ..-.|.+| +.-...+.+||++.
T Consensus 343 qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~g--k~~~~--~--~~~~~~gy-------~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 343 QGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDG--KALRI--P--SKPLHMGY-------PQALDEIYKWLEDK 409 (411)
T ss_dssp TTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT---EEEEE-----SSSHHHHH-------HHHHHHHHHHHHHH
T ss_pred hccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCC--ceeec--C--CCccccch-------HHHHHHHHHHHHHh
Confidence 23 677899999999999999999988887765443 44555 1 23346653 56778888888764
No 88
>PRK10162 acetyl esterase; Provisional
Probab=99.27 E-value=4.2e-10 Score=116.82 Aligned_cols=61 Identities=15% Similarity=0.104 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHH---hcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCC-chhhcceeEEccCCCC
Q 008186 332 EDVPAAMEYIRA---QSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGR-ESRLAAIVTLASSLDY 392 (574)
Q Consensus 332 ~Dl~a~Id~l~~---~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~-p~~v~~lVlLap~~~~ 392 (574)
+|+.++++++.+ +++.+..+++++|+|+||.+++.++......+. +..+.++|++.|..+.
T Consensus 133 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 133 EEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 666677776654 456566689999999999999999875321111 3578899999887654
No 89
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.26 E-value=1.2e-10 Score=107.93 Aligned_cols=119 Identities=21% Similarity=0.335 Sum_probs=87.0
Q ss_pred hhHHHHHHHHHHhcCCCCCcE-EEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKL-LAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQ 410 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki-~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~ 410 (574)
+|..+++++++.+...- +. .+.|+|+||.+++.+|.+ .+.....+.+.|+....
T Consensus 86 ~Da~aaldW~~~~hp~s--~~~~l~GfSFGa~Ia~~la~r------~~e~~~~is~~p~~~~~----------------- 140 (210)
T COG2945 86 EDAAAALDWLQARHPDS--ASCWLAGFSFGAYIAMQLAMR------RPEILVFISILPPINAY----------------- 140 (210)
T ss_pred HHHHHHHHHHHhhCCCc--hhhhhcccchHHHHHHHHHHh------cccccceeeccCCCCch-----------------
Confidence 99999999999986533 43 689999999999999988 44455566655553200
Q ss_pred hcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCcc
Q 008186 411 ALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKF 490 (574)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (574)
+
T Consensus 141 ----------------------------------------d--------------------------------------- 141 (210)
T COG2945 141 ----------------------------------------D--------------------------------------- 141 (210)
T ss_pred ----------------------------------------h---------------------------------------
Confidence 0
Q ss_pred ccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 008186 491 FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 568 (574)
Q Consensus 491 ~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~ 568 (574)
...+....+|.++|+|+.|.+++++...++.+..+- +++++ ++..|+-|- .-..+.+.|.+||.
T Consensus 142 --fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~~---~~i~i--~~a~HFF~g-------Kl~~l~~~i~~~l~ 205 (210)
T COG2945 142 --FSFLAPCPSPGLVIQGDADDVVDLVAVLKWQESIKI---TVITI--PGADHFFHG-------KLIELRDTIADFLE 205 (210)
T ss_pred --hhhccCCCCCceeEecChhhhhcHHHHHHhhcCCCC---ceEEe--cCCCceecc-------cHHHHHHHHHHHhh
Confidence 011445568999999999999999988888877442 55555 566666663 44788999999995
No 90
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.19 E-value=8.5e-10 Score=105.82 Aligned_cols=70 Identities=21% Similarity=0.487 Sum_probs=42.8
Q ss_pred ceeeecCCCceEEEEEeCCCCCCCCCCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCC-cccCCC
Q 008186 83 HYVSVANCDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGA-GLSVRG 158 (574)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~-G~S~~~ 158 (574)
|.+.+. +|-.+++|.-.|...-+.+++.||+.+|++..-..| ..+|.||+..||+|+.+|.-.| |+|+..
T Consensus 5 hvi~~~-~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~-----agLA~YL~~NGFhViRyDsl~HvGlSsG~ 75 (294)
T PF02273_consen 5 HVIRLE-DGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHF-----AGLAEYLSANGFHVIRYDSLNHVGLSSGD 75 (294)
T ss_dssp EEEEET-TTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGG-----HHHHHHHHTTT--EEEE---B--------
T ss_pred ceeEcC-CCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHH-----HHHHHHHhhCCeEEEeccccccccCCCCC
Confidence 556665 889999999999988888889999999999987776 5899999999999999998765 777753
No 91
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.19 E-value=1e-09 Score=106.16 Aligned_cols=64 Identities=20% Similarity=0.187 Sum_probs=49.3
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 008186 497 HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 497 ~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~ 570 (574)
..++||+.++.|++|+.+..+.+..+.+...+ ..+++++ ..+|+= . .++.+++...|.+.+..+
T Consensus 173 ~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~-~f~l~~f------dGgHFf--l-~~~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 173 APLACPIHAFGGEKDHEVSRDELGAWREHTKG-DFTLRVF------DGGHFF--L-NQQREEVLARLEQHLAHH 236 (244)
T ss_pred CCcCcceEEeccCcchhccHHHHHHHHHhhcC-CceEEEe------cCccee--h-hhhHHHHHHHHHHHhhhh
Confidence 67899999999999999999999999998775 5588887 344431 1 136678888888888643
No 92
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.12 E-value=1.3e-09 Score=106.64 Aligned_cols=126 Identities=23% Similarity=0.283 Sum_probs=82.7
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhhh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQA 411 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~~ 411 (574)
+-+.++|+...+ .+.+..+++++|+|+||++++.++..+ +..+.++|++++.......
T Consensus 88 ~~l~~li~~~~~-~~i~~~ri~l~GFSQGa~~al~~~l~~-----p~~~~gvv~lsG~~~~~~~---------------- 145 (216)
T PF02230_consen 88 ERLDELIDEEVA-YGIDPSRIFLGGFSQGAAMALYLALRY-----PEPLAGVVALSGYLPPESE---------------- 145 (216)
T ss_dssp HHHHHHHHHHHH-TT--GGGEEEEEETHHHHHHHHHHHCT-----SSTSSEEEEES---TTGCC----------------
T ss_pred HHHHHHHHHHHH-cCCChhheehhhhhhHHHHHHHHHHHc-----CcCcCEEEEeecccccccc----------------
Confidence 444555555433 345566999999999999999999986 8899999999875422110
Q ss_pred cCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCccc
Q 008186 412 LNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFF 491 (574)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (574)
.. .
T Consensus 146 ---------------------------------------~~--------------------------------------~ 148 (216)
T PF02230_consen 146 ---------------------------------------LE--------------------------------------D 148 (216)
T ss_dssp ---------------------------------------CH--------------------------------------C
T ss_pred ---------------------------------------cc--------------------------------------c
Confidence 00 0
Q ss_pred cccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCC--ceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 008186 492 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 569 (574)
Q Consensus 492 ~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a--~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~ 569 (574)
...... ++|++++||++|+++|.+.++...+.+.+. +++++.+ ++.+|. ...+..+.+.+||++
T Consensus 149 ~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~-----~g~gH~-------i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 149 RPEALA--KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEY-----PGGGHE-------ISPEELRDLREFLEK 214 (216)
T ss_dssp CHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEE-----TT-SSS---------HHHHHHHHHHHHH
T ss_pred cccccC--CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEc-----CCCCCC-------CCHHHHHHHHHHHhh
Confidence 000111 689999999999999999888888777543 4678887 456663 346677889999987
Q ss_pred h
Q 008186 570 Y 570 (574)
Q Consensus 570 ~ 570 (574)
+
T Consensus 215 ~ 215 (216)
T PF02230_consen 215 H 215 (216)
T ss_dssp H
T ss_pred h
Confidence 5
No 93
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.11 E-value=6.2e-10 Score=112.95 Aligned_cols=58 Identities=31% Similarity=0.338 Sum_probs=47.2
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCC
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS 394 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~ 394 (574)
.+|..++|+++..+ +...+++.++|.|.+|...+.+|+.. ++.+++++...+..+...
T Consensus 83 ~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~-----~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 83 AQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARR-----PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp HHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT------TTEEEEEEESE-SBTCC
T ss_pred HHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcC-----CCCceEEEecccCCcccc
Confidence 38999999999887 55556999999999999999999863 889999999888766533
No 94
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.08 E-value=5e-10 Score=119.38 Aligned_cols=55 Identities=15% Similarity=0.140 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
+++.++|+.+....+.+.++++||||||||.++..++..+ +.+|.++++++|...
T Consensus 101 ~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~-----p~rV~rItgLDPAgP 155 (442)
T TIGR03230 101 KDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLT-----KHKVNRITGLDPAGP 155 (442)
T ss_pred HHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhC-----CcceeEEEEEcCCCC
Confidence 7888888888766555455999999999999999998875 778999999998654
No 95
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.07 E-value=3.4e-10 Score=115.01 Aligned_cols=56 Identities=16% Similarity=0.220 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
+++..+|+.+....+.+.+++++|||||||.++..++.++ +++|.++|++.|....
T Consensus 94 ~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~-----~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 94 AELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRL-----NGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHh-----cCccceeEEecCCccc
Confidence 7788888888776554445899999999999999999886 7789999999987543
No 96
>PRK10115 protease 2; Provisional
Probab=99.05 E-value=6.4e-09 Score=118.41 Aligned_cols=56 Identities=14% Similarity=0.201 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
+|+.++++++..+--.+..++.+.|.|.||.++..++.++ |+.++++|+..|..++
T Consensus 506 ~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~-----Pdlf~A~v~~vp~~D~ 561 (686)
T PRK10115 506 NDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQR-----PELFHGVIAQVPFVDV 561 (686)
T ss_pred HHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcC-----hhheeEEEecCCchhH
Confidence 8999999999776435567999999999999999999875 8999999998887664
No 97
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.02 E-value=1e-09 Score=110.44 Aligned_cols=63 Identities=21% Similarity=0.279 Sum_probs=44.3
Q ss_pred hhHHHHHHHHHHhcCC--CCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCC
Q 008186 332 EDVPAAMEYIRAQSKP--KDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS 394 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~--~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~ 394 (574)
+|+.++|++++...+. ...+++|+|||.|+.-++.|+.........+.|.+.|+-+|..+...
T Consensus 88 ~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 88 EEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp HHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTS
T ss_pred HHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhH
Confidence 9999999999988422 33499999999999999999998532112367999999999877544
No 98
>COG0400 Predicted esterase [General function prediction only]
Probab=99.01 E-value=1.3e-08 Score=98.16 Aligned_cols=123 Identities=15% Similarity=0.172 Sum_probs=91.1
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhhh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQA 411 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~~ 411 (574)
+.+.++++.+..+++.+..+++++|+|.|+++++.+...+ +..++++|++++.......
T Consensus 81 ~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~-----~~~~~~ail~~g~~~~~~~---------------- 139 (207)
T COG0400 81 EKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTL-----PGLFAGAILFSGMLPLEPE---------------- 139 (207)
T ss_pred HHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhC-----chhhccchhcCCcCCCCCc----------------
Confidence 5566777777788888777999999999999999999986 7889999998876432110
Q ss_pred cCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCccc
Q 008186 412 LNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFF 491 (574)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (574)
T Consensus 140 -------------------------------------------------------------------------------- 139 (207)
T COG0400 140 -------------------------------------------------------------------------------- 139 (207)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCC--CceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 008186 492 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 569 (574)
Q Consensus 492 ~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~--a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~ 569 (574)
..-..-..|+++++|+.|++||...+.++.+.+.. +++++..+ . .+|. -+.+..+.+.+|+..
T Consensus 140 --~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~-----~-~GH~-------i~~e~~~~~~~wl~~ 204 (207)
T COG0400 140 --LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWH-----E-GGHE-------IPPEELEAARSWLAN 204 (207)
T ss_pred --cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEe-----c-CCCc-------CCHHHHHHHHHHHHh
Confidence 00011236999999999999999988887776643 45566665 2 6774 456677888888875
Q ss_pred h
Q 008186 570 Y 570 (574)
Q Consensus 570 ~ 570 (574)
.
T Consensus 205 ~ 205 (207)
T COG0400 205 T 205 (207)
T ss_pred c
Confidence 3
No 99
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.99 E-value=5.8e-09 Score=103.98 Aligned_cols=59 Identities=25% Similarity=0.416 Sum_probs=47.8
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
..+..+|.+|+++++.. ++.+|||||||..++.|+..++....-+.+.++|.|+++...
T Consensus 87 ~wl~~vl~~L~~~Y~~~--~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 87 KWLKKVLKYLKKKYHFK--KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHHHHHCC--S--EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred HHHHHHHHHHHHhcCCC--EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 78899999999999987 999999999999999999998665545689999999987643
No 100
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.98 E-value=4.4e-08 Score=96.80 Aligned_cols=45 Identities=9% Similarity=0.098 Sum_probs=39.1
Q ss_pred CcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCcccCCCC
Q 008186 110 HPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSVRGS 159 (574)
Q Consensus 110 ~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G~S~~~~ 159 (574)
..||=+||-+++...| +.+...|.+.|.+++.+++||+|.+..+.
T Consensus 36 gTVv~~hGsPGSH~DF-----kYi~~~l~~~~iR~I~iN~PGf~~t~~~~ 80 (297)
T PF06342_consen 36 GTVVAFHGSPGSHNDF-----KYIRPPLDEAGIRFIGINYPGFGFTPGYP 80 (297)
T ss_pred eeEEEecCCCCCccch-----hhhhhHHHHcCeEEEEeCCCCCCCCCCCc
Confidence 4689999999998776 35788999999999999999999998764
No 101
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.97 E-value=1.6e-07 Score=93.80 Aligned_cols=196 Identities=12% Similarity=0.105 Sum_probs=114.3
Q ss_pred ccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccc
Q 008186 326 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPL 405 (574)
Q Consensus 326 ~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~ 405 (574)
+++++ +++..+++++..+ .++.+|--.|++|..++|..| |++|.++|++++.............
T Consensus 82 md~LA-e~l~~Vl~~f~lk------~vIg~GvGAGAnIL~rfAl~~-----p~~V~GLiLvn~~~~~~gw~Ew~~~---- 145 (283)
T PF03096_consen 82 MDQLA-EMLPEVLDHFGLK------SVIGFGVGAGANILARFALKH-----PERVLGLILVNPTCTAAGWMEWFYQ---- 145 (283)
T ss_dssp HHHHH-CTHHHHHHHHT---------EEEEEETHHHHHHHHHHHHS-----GGGEEEEEEES---S---HHHHHHH----
T ss_pred HHHHH-HHHHHHHHhCCcc------EEEEEeeccchhhhhhccccC-----ccceeEEEEEecCCCCccHHHHHHH----
Confidence 45665 8888888887665 899999999999999999997 9999999999987654433222110
Q ss_pred cChhhhcCCCccchHhHHHHhCCCCCCchhHHHHH-hhhhccccc-CCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCc
Q 008186 406 ADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWL-NNLISAEDM-MHPELLKKLVLNNFCTIPAKLILQLTTAFREGGL 483 (574)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (574)
.+...........+.+.+++ ...++.... .+.+.++.+........+...+..+.+.+..
T Consensus 146 ---------------K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~--- 207 (283)
T PF03096_consen 146 ---------------KLSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNS--- 207 (283)
T ss_dssp ---------------HHH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT---
T ss_pred ---------------HHhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhc---
Confidence 00000001111122233332 233333221 2444454444444345666777777776653
Q ss_pred ccCCCccccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHH
Q 008186 484 RDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCI 563 (574)
Q Consensus 484 ~~~~~~~~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~I 563 (574)
+.+.........||+|++.|+..+.. +.+.++...+.....++..+ ++++...-.| +|+.+.+.+
T Consensus 208 -----R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv--~dcGglV~eE------qP~klaea~ 272 (283)
T PF03096_consen 208 -----RTDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKV--ADCGGLVLEE------QPGKLAEAF 272 (283)
T ss_dssp ----------SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEE--TT-TT-HHHH-------HHHHHHHH
T ss_pred -----cccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEe--cccCCccccc------CcHHHHHHH
Confidence 22444556777799999999999874 66788888886666677777 6666666654 999999999
Q ss_pred HHHHhhh
Q 008186 564 VQFLGRY 570 (574)
Q Consensus 564 l~FL~~~ 570 (574)
.=||+..
T Consensus 273 ~lFlQG~ 279 (283)
T PF03096_consen 273 KLFLQGM 279 (283)
T ss_dssp HHHHHHT
T ss_pred HHHHccC
Confidence 9999753
No 102
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.96 E-value=1.2e-08 Score=117.01 Aligned_cols=73 Identities=15% Similarity=0.079 Sum_probs=50.0
Q ss_pred ccccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCC--CceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 008186 491 FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 568 (574)
Q Consensus 491 ~~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~--a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~ 568 (574)
++...+.+|++|+|+|+|..|..++++.+.++++.+.. ..+++.+ +.++|.... ...+.++.+.+.+|++
T Consensus 446 n~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l------~~g~H~~~~--~~~~~d~~e~~~~Wfd 517 (767)
T PRK05371 446 NYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFL------HQGGHVYPN--NWQSIDFRDTMNAWFT 517 (767)
T ss_pred CHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEE------eCCCccCCC--chhHHHHHHHHHHHHH
Confidence 44567889999999999999999999888888777753 2334443 234453211 1134567788888887
Q ss_pred hhc
Q 008186 569 RYD 571 (574)
Q Consensus 569 ~~~ 571 (574)
++.
T Consensus 518 ~~L 520 (767)
T PRK05371 518 HKL 520 (767)
T ss_pred hcc
Confidence 763
No 103
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.95 E-value=8.6e-10 Score=89.90 Aligned_cols=59 Identities=24% Similarity=0.474 Sum_probs=51.5
Q ss_pred CceEEEEEeCCCCCCCCCCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCcccCC
Q 008186 91 DWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSVR 157 (574)
Q Consensus 91 ~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G~S~~ 157 (574)
|.+|.+..|.|+.. .+..|+++||++.++..|. .+|..|+++||.|+++|+||||+|..
T Consensus 1 G~~L~~~~w~p~~~---~k~~v~i~HG~~eh~~ry~-----~~a~~L~~~G~~V~~~D~rGhG~S~g 59 (79)
T PF12146_consen 1 GTKLFYRRWKPENP---PKAVVVIVHGFGEHSGRYA-----HLAEFLAEQGYAVFAYDHRGHGRSEG 59 (79)
T ss_pred CcEEEEEEecCCCC---CCEEEEEeCCcHHHHHHHH-----HHHHHHHhCCCEEEEECCCcCCCCCC
Confidence 46789999998864 2567999999999988774 69999999999999999999999984
No 104
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.94 E-value=5.4e-09 Score=99.33 Aligned_cols=170 Identities=18% Similarity=0.315 Sum_probs=118.2
Q ss_pred HHHHhHHHHHHHHhcCcEEeccccchhhhhccc-----chhHHhhcccceeccCCCccchhhhhHHHHHHHHHHhcCCCC
Q 008186 275 QIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFS-----TIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKD 349 (574)
Q Consensus 275 ~~~~~~~~l~~~~~~Gy~vi~pdl~~~~~~~~~-----~~~~~~~~~~~~~~~d~s~~~~a~~Dl~a~Id~l~~~~g~~~ 349 (574)
++|..+.++ +..||.|+.||+|.. .++.. ..+.|-+. .+.+-. ..|+.+++++|+.+...
T Consensus 55 n~r~~Adk~---A~~Gy~v~vPD~~~G-dp~~~~~~~~~~~~w~~~--------~~~~~~-~~~i~~v~k~lk~~g~~-- 119 (242)
T KOG3043|consen 55 NTREGADKV---ALNGYTVLVPDFFRG-DPWSPSLQKSERPEWMKG--------HSPPKI-WKDITAVVKWLKNHGDS-- 119 (242)
T ss_pred HHHHHHHHH---hcCCcEEEcchhhcC-CCCCCCCChhhhHHHHhc--------CCcccc-hhHHHHHHHHHHHcCCc--
Confidence 477888888 899999999999974 43322 23444442 222232 38899999999865322
Q ss_pred CcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhhhcCCCccchHhHHHHhCCC
Q 008186 350 GKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPL 429 (574)
Q Consensus 350 ~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (574)
.++-++|+||||.++..+... .+.+.+.|..-|...
T Consensus 120 kkIGv~GfCwGak~vv~~~~~------~~~f~a~v~~hps~~-------------------------------------- 155 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAK------DPEFDAGVSFHPSFV-------------------------------------- 155 (242)
T ss_pred ceeeEEEEeecceEEEEeecc------chhheeeeEecCCcC--------------------------------------
Confidence 389999999999999988876 347777777555320
Q ss_pred CCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCccccccccCCCCCcEEEEEeC
Q 008186 430 SSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGD 509 (574)
Q Consensus 430 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLII~Ge 509 (574)
+ .+...++++|+|++.|+
T Consensus 156 ---------------------d-----------------------------------------~~D~~~vk~Pilfl~ae 173 (242)
T KOG3043|consen 156 ---------------------D-----------------------------------------SADIANVKAPILFLFAE 173 (242)
T ss_pred ---------------------C-----------------------------------------hhHHhcCCCCEEEEeec
Confidence 0 12356788999999999
Q ss_pred CCCCCCHHHHHHHHHhCCCCc---eEEEEEeCCCCCCCCcccccc---------cccchhhHHHHHHHHHhhhc
Q 008186 510 QDLICPPEAVEETVKLLPEDL---VTYKVFGEPSGPHYAHYDLVG---------GRMAVEQVYPCIVQFLGRYD 571 (574)
Q Consensus 510 ~D~vvp~e~~~~l~~~lp~a~---~~l~ii~~~~~~h~gH~d~l~---------~~~~pe~v~~~Il~FL~~~~ 571 (574)
.|.++|++....+.+.+.+.. .+++++ ++.+| +|+. .+.+.++.+..+++|++++.
T Consensus 174 ~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f-----~g~~H-Gf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 174 LDEDVPPKDVKAWEEKLKENPAVGSQVKTF-----SGVGH-GFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred ccccCCHHHHHHHHHHHhcCcccceeEEEc-----CCccc-hhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 999999998888888776532 256666 33333 2221 12345788999999998764
No 105
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.91 E-value=4.2e-07 Score=96.23 Aligned_cols=224 Identities=16% Similarity=0.161 Sum_probs=117.3
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCC---chhHHHhhccccCh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS---SKSTLKLLLPLADP 408 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~---~~~~l~~~~~~~~~ 408 (574)
.-..++++.+....+..+ |++|||.|+||+.++.+|+.+ |+.+.-+|+-+++++++. ....++....+...
T Consensus 123 ~ae~~Fv~~V~~~hp~~~-kp~liGnCQgGWa~~mlAA~~-----Pd~~gplvlaGaPlsywaG~~g~nPmRy~ggl~gg 196 (581)
T PF11339_consen 123 RAEAAFVEEVAERHPDAP-KPNLIGNCQGGWAAMMLAALR-----PDLVGPLVLAGAPLSYWAGERGDNPMRYMGGLLGG 196 (581)
T ss_pred HHHHHHHHHHHHhCCCCC-CceEEeccHHHHHHHHHHhcC-----cCccCceeecCCCcccccCCCCCCcHHHhcCCCcc
Confidence 444567777766654333 899999999999999999996 888999999998888877 33333332222211
Q ss_pred ------hhhcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCH--HHHHHHHhhcccCCcHHHHHHHHHH-HH
Q 008186 409 ------AQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHP--ELLKKLVLNNFCTIPAKLILQLTTA-FR 479 (574)
Q Consensus 409 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 479 (574)
...++-..+.-..+...+-.......++.+.+ .++...+.-.. ..++++ ...+..++...+.++... |.
T Consensus 197 sw~~~l~sDlG~G~fdGa~lv~nFe~lnPa~~~w~K~y-~Ly~~iD~e~~Rfl~FErW-wgg~~~l~~~ei~~Iv~nLFv 274 (581)
T PF11339_consen 197 SWLTALVSDLGNGRFDGAWLVQNFENLNPANTYWSKYY-DLYANIDTERERFLEFERW-WGGFYDLNGEEILWIVENLFV 274 (581)
T ss_pred hHHHHHHHHcCCCccCcHHHHhhhhccChhHHHHHHHH-HHHhccCCchhhhhHHHHH-hCCccCCCHHHHHHHHHHHhc
Confidence 11122222211122222211111111222222 12221110010 111111 123345666666666643 44
Q ss_pred cCCcccCCCccc----cccccCCCCCcEEEEEeCCCCCCCHHHHHHH-HHhCC------CCceEEEEEeCCCCCCCCccc
Q 008186 480 EGGLRDRGGKFF----YKDHIHKCNIPILAIAGDQDLICPPEAVEET-VKLLP------EDLVTYKVFGEPSGPHYAHYD 548 (574)
Q Consensus 480 ~~~~~~~~~~~~----~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l-~~~lp------~a~~~l~ii~~~~~~h~gH~d 548 (574)
.+.+..- .+. ..-++++|+||+.+++|..|.|+||+.+-.+ ....+ ..+.+++.+ -..+.||++
T Consensus 275 gNrL~~g--~~~~~~G~~~DLr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~---~h~~vGHLG 349 (581)
T PF11339_consen 275 GNRLAKG--EFRVSDGRRVDLRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYL---LHESVGHLG 349 (581)
T ss_pred cchhccC--ceeccCCcEeehhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEE---ecCCCCceE
Confidence 3333321 111 1348999999999999999999999876332 22222 122233332 246789998
Q ss_pred ccccccchhhHHHHHHHHHh
Q 008186 549 LVGGRMAVEQVYPCIVQFLG 568 (574)
Q Consensus 549 ~l~~~~~pe~v~~~Il~FL~ 568 (574)
.+.+......=...|..-|+
T Consensus 350 IFVS~~VarkEH~~i~~~ld 369 (581)
T PF11339_consen 350 IFVSGKVARKEHREIASNLD 369 (581)
T ss_pred EEeccHhhHHHHHHHHHHHH
Confidence 87764433333334443333
No 106
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.87 E-value=5e-08 Score=94.66 Aligned_cols=60 Identities=25% Similarity=0.347 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHHh---cCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 332 EDVPAAMEYIRAQ---SKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 332 ~Dl~a~Id~l~~~---~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
+|+.++++++.+. ++.+..+++++|+|-||.+++.++......+ ...++++++++|..++
T Consensus 50 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~-~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 50 EDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRG-LPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTT-TCHESEEEEESCHSST
T ss_pred cccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhc-ccchhhhhcccccccc
Confidence 8889999998876 4555569999999999999999998642211 2348899999997654
No 107
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.87 E-value=7.1e-08 Score=94.12 Aligned_cols=53 Identities=17% Similarity=0.319 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 389 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~ 389 (574)
..+.++|+++..+++++..++++.|+|.||.++..++..| |+.++++...++.
T Consensus 79 ~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~-----pd~faa~a~~sG~ 131 (220)
T PF10503_consen 79 AFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAY-----PDLFAAVAVVSGV 131 (220)
T ss_pred hhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhC-----CccceEEEeeccc
Confidence 5678889999999999999999999999999999999987 9999988877654
No 108
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.85 E-value=8.7e-08 Score=94.13 Aligned_cols=38 Identities=26% Similarity=0.473 Sum_probs=34.5
Q ss_pred cEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCc
Q 008186 111 PLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAG 153 (574)
Q Consensus 111 p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G 153 (574)
||+|+||.++++..| ..+++.|...++.||.++.+|.+
T Consensus 2 ~lf~~p~~gG~~~~y-----~~la~~l~~~~~~v~~i~~~~~~ 39 (229)
T PF00975_consen 2 PLFCFPPAGGSASSY-----RPLARALPDDVIGVYGIEYPGRG 39 (229)
T ss_dssp EEEEESSTTCSGGGG-----HHHHHHHTTTEEEEEEECSTTSC
T ss_pred eEEEEcCCccCHHHH-----HHHHHhCCCCeEEEEEEecCCCC
Confidence 799999999999888 47999998877999999999998
No 109
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.84 E-value=9.6e-09 Score=116.08 Aligned_cols=44 Identities=16% Similarity=0.124 Sum_probs=39.3
Q ss_pred CcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCcccCCC
Q 008186 110 HPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSVRG 158 (574)
Q Consensus 110 ~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G~S~~~ 158 (574)
++|+|+||++.+...|. .++++|+++||+|+++|+||||.|...
T Consensus 450 P~VVllHG~~g~~~~~~-----~lA~~La~~Gy~VIaiDlpGHG~S~~~ 493 (792)
T TIGR03502 450 PVVIYQHGITGAKENAL-----AFAGTLAAAGVATIAIDHPLHGARSFD 493 (792)
T ss_pred cEEEEeCCCCCCHHHHH-----HHHHHHHhCCcEEEEeCCCCCCccccc
Confidence 46999999999998884 689999999999999999999999654
No 110
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.82 E-value=9.7e-09 Score=105.93 Aligned_cols=53 Identities=19% Similarity=0.289 Sum_probs=40.5
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccC
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 389 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~ 389 (574)
..|...++|++.....++.++|.++|+||||..++.+++. .++|+..|..+..
T Consensus 207 ~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL------DdRIka~v~~~~l 259 (390)
T PF12715_consen 207 AWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL------DDRIKATVANGYL 259 (390)
T ss_dssp HHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-------TT--EEEEES-B
T ss_pred HHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc------chhhHhHhhhhhh
Confidence 3556668999988776777799999999999999999998 8899888876654
No 111
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.74 E-value=1.2e-07 Score=89.26 Aligned_cols=42 Identities=21% Similarity=0.297 Sum_probs=32.3
Q ss_pred CCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcc
Q 008186 498 KCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHY 547 (574)
Q Consensus 498 ~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~ 547 (574)
.+.+|.++|.+++|+++|.+.+.++.+.+. + +++++ ++.||+
T Consensus 112 ~l~~~~~viaS~nDp~vp~~~a~~~A~~l~-a--~~~~~-----~~~GHf 153 (171)
T PF06821_consen 112 PLPFPSIVIASDNDPYVPFERAQRLAQRLG-A--ELIIL-----GGGGHF 153 (171)
T ss_dssp HHHCCEEEEEETTBSSS-HHHHHHHHHHHT----EEEEE-----TS-TTS
T ss_pred ccCCCeEEEEcCCCCccCHHHHHHHHHHcC-C--CeEEC-----CCCCCc
Confidence 344677999999999999999999999985 4 77877 566665
No 112
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.73 E-value=5.4e-07 Score=91.10 Aligned_cols=58 Identities=22% Similarity=0.328 Sum_probs=41.1
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
+.-.++|+.+....+.+..+++++|||+|+.+++.++.++.. ...+|.+++++-|.+.
T Consensus 66 ~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~--~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 66 EHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPD--LKFRVKKVILLFPTIE 123 (266)
T ss_pred HHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccc--cCCceeEEEEeCCccc
Confidence 444455555544332133489999999999999999999620 1268999999998764
No 113
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.72 E-value=1.5e-07 Score=107.75 Aligned_cols=154 Identities=19% Similarity=0.207 Sum_probs=96.1
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcce-eEEccCCCCCCchhHHHhhccccChhh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAI-VTLASSLDYTSSKSTLKLLLPLADPAQ 410 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~l-VlLap~~~~~~~~~~l~~~~~~~~~~~ 410 (574)
+|...++.++.+..-++..++.++|+|.||.+++..+... +..+.+. |.++|..++.--...
T Consensus 590 ~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~-----~~~~fkcgvavaPVtd~~~yds~------------ 652 (755)
T KOG2100|consen 590 KDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESD-----PGDVFKCGVAVAPVTDWLYYDST------------ 652 (755)
T ss_pred HHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhC-----cCceEEEEEEecceeeeeeeccc------------
Confidence 6777777777666566777999999999999999999883 4466665 899988765210000
Q ss_pred hcCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCcc
Q 008186 411 ALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKF 490 (574)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (574)
+..+++ + .+......+. ..
T Consensus 653 ------------------------~terym----g--------------------~p~~~~~~y~-------------e~ 671 (755)
T KOG2100|consen 653 ------------------------YTERYM----G--------------------LPSENDKGYE-------------ES 671 (755)
T ss_pred ------------------------ccHhhc----C--------------------CCccccchhh-------------hc
Confidence 000000 0 0000000000 00
Q ss_pred ccccccCCCCCcE-EEEEeCCCCCCCHHHHHHHHHhCCCCce--EEEEEeCCCCCCCCcccccccccchhhHHHHHHHHH
Q 008186 491 FYKDHIHKCNIPI-LAIAGDQDLICPPEAVEETVKLLPEDLV--TYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 567 (574)
Q Consensus 491 ~~~~~l~~I~vPv-LII~Ge~D~vvp~e~~~~l~~~lp~a~~--~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL 567 (574)
.....+..++.|. |++||+.|.-|+.+...++.+.|...++ +..++ ++..|- +...+.-..++..+..|+
T Consensus 672 ~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vy-----pde~H~--is~~~~~~~~~~~~~~~~ 744 (755)
T KOG2100|consen 672 SVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVY-----PDENHG--ISYVEVISHLYEKLDRFL 744 (755)
T ss_pred cccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEe-----CCCCcc--cccccchHHHHHHHHHHH
Confidence 1123455666665 9999999999999999999887765444 44555 566664 222334467888999999
Q ss_pred hhh
Q 008186 568 GRY 570 (574)
Q Consensus 568 ~~~ 570 (574)
..+
T Consensus 745 ~~~ 747 (755)
T KOG2100|consen 745 RDC 747 (755)
T ss_pred HHH
Confidence 854
No 114
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.71 E-value=2.4e-06 Score=84.57 Aligned_cols=196 Identities=12% Similarity=0.112 Sum_probs=116.6
Q ss_pred ccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccc
Q 008186 326 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPL 405 (574)
Q Consensus 326 ~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~ 405 (574)
+|+++ +++..+++++..+ .++-+|--.|++|..++|..| |++|-++|+|++...-..+.. +..
T Consensus 105 md~LA-d~l~~VL~~f~lk------~vIg~GvGAGAyIL~rFAl~h-----p~rV~GLvLIn~~~~a~gwie---w~~-- 167 (326)
T KOG2931|consen 105 MDDLA-DMLPEVLDHFGLK------SVIGMGVGAGAYILARFALNH-----PERVLGLVLINCDPCAKGWIE---WAY-- 167 (326)
T ss_pred HHHHH-HHHHHHHHhcCcc------eEEEecccccHHHHHHHHhcC-----hhheeEEEEEecCCCCchHHH---HHH--
Confidence 34444 6666666665443 799999999999999999997 999999999998654333221 111
Q ss_pred cChhhhcCCCccchHhHHHHhCCCCCCchhHHHH-Hhhhhccccc-CCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCc
Q 008186 406 ADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSW-LNNLISAEDM-MHPELLKKLVLNNFCTIPAKLILQLTTAFREGGL 483 (574)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (574)
..+...+.........+.++ +...++.... .+.+.++++........+...+..+...+....
T Consensus 168 --------------~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~- 232 (326)
T KOG2931|consen 168 --------------NKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRR- 232 (326)
T ss_pred --------------HHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCC-
Confidence 00000000000001112222 2333333322 245555555444444555566666666554321
Q ss_pred ccCCCcccccc----ccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhH
Q 008186 484 RDRGGKFFYKD----HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQV 559 (574)
Q Consensus 484 ~~~~~~~~~~~----~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v 559 (574)
+... ....++||+|++.|+..+.+ +.+.++...+......+..+ .+++.....+ +|..+
T Consensus 233 -------DL~~~r~~~~~tlkc~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~--~d~g~l~~e~------qP~kl 295 (326)
T KOG2931|consen 233 -------DLSIERPKLGTTLKCPVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKM--ADCGGLVQEE------QPGKL 295 (326)
T ss_pred -------CccccCCCcCccccccEEEEecCCCchh--hhhhhhhcccCcccceEEEE--cccCCccccc------CchHH
Confidence 1111 11266799999999999875 56777777775544466666 5666666654 89999
Q ss_pred HHHHHHHHhhh
Q 008186 560 YPCIVQFLGRY 570 (574)
Q Consensus 560 ~~~Il~FL~~~ 570 (574)
.+.+.=|++..
T Consensus 296 ~ea~~~FlqG~ 306 (326)
T KOG2931|consen 296 AEAFKYFLQGM 306 (326)
T ss_pred HHHHHHHHccC
Confidence 99999998753
No 115
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.70 E-value=1.2e-06 Score=90.65 Aligned_cols=61 Identities=15% Similarity=0.216 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHH----hcCCCCCcEEEEEeChhHHHHHHHHHhcCCC-CCchhhcceeEEccCCCC
Q 008186 332 EDVPAAMEYIRA----QSKPKDGKLLAIGHSMGGILLYAMLSRCGFE-GRESRLAAIVTLASSLDY 392 (574)
Q Consensus 332 ~Dl~a~Id~l~~----~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~-~~p~~v~~lVlLap~~~~ 392 (574)
+|..+++.++.+ .++.+..+++|+|-|-||.++..++.+.... ..+.++++.|++-|....
T Consensus 144 ~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 144 DDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred hHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 555555555544 3567777999999999999999998875422 136789999999987643
No 116
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.69 E-value=5.4e-07 Score=89.34 Aligned_cols=43 Identities=28% Similarity=0.320 Sum_probs=33.3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 349 DGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 349 ~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
..++.+.|||-||-+++.++..+.....+.+++++|+|.|.-+
T Consensus 90 ~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 90 FSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred ccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 3489999999999999999987422212457999999998753
No 117
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.65 E-value=8.1e-07 Score=84.69 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=28.0
Q ss_pred cEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 351 KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 351 ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
.+.|||.||||..|..++.++ .+++ |+|+|.+.+
T Consensus 60 ~~~liGSSlGG~~A~~La~~~-------~~~a-vLiNPav~p 93 (187)
T PF05728_consen 60 NVVLIGSSLGGFYATYLAERY-------GLPA-VLINPAVRP 93 (187)
T ss_pred CeEEEEEChHHHHHHHHHHHh-------CCCE-EEEcCCCCH
Confidence 599999999999999999886 2333 899998754
No 118
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.59 E-value=2.2e-06 Score=88.62 Aligned_cols=61 Identities=30% Similarity=0.288 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHh---cCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCC
Q 008186 332 EDVPAAMEYIRAQ---SKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 393 (574)
Q Consensus 332 ~Dl~a~Id~l~~~---~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~ 393 (574)
+|+.+.+.+++.. ++.+..++.++|+|-||.+++.++..-... ..+.....+++.|..+..
T Consensus 131 ~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~-~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 131 EDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDR-GLPLPAAQVLISPLLDLT 194 (312)
T ss_pred HHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhc-CCCCceEEEEEecccCCc
Confidence 7777777777754 566677999999999999999998863111 013568888988877654
No 119
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.58 E-value=1.5e-06 Score=92.11 Aligned_cols=39 Identities=23% Similarity=0.483 Sum_probs=25.7
Q ss_pred CCc-EEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCC
Q 008186 109 NHP-LLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGA 152 (574)
Q Consensus 109 ~~p-~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~ 152 (574)
+-| |||-||++++...| ..++..|+++||-|+++|+|..
T Consensus 99 ~~PvvIFSHGlgg~R~~y-----S~~~~eLAS~GyVV~aieHrDg 138 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSY-----SAICGELASHGYVVAAIEHRDG 138 (379)
T ss_dssp -EEEEEEE--TT--TTTT-----HHHHHHHHHTT-EEEEE---SS
T ss_pred CCCEEEEeCCCCcchhhH-----HHHHHHHHhCCeEEEEeccCCC
Confidence 445 78999999998877 4789999999999999999964
No 120
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.57 E-value=2.5e-07 Score=91.10 Aligned_cols=58 Identities=28% Similarity=0.501 Sum_probs=39.4
Q ss_pred hhHHHHHHHHHHhc---CCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 332 EDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~---g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
+-+.+.++.+...+ ..+..++++|||||||.++-.++...... +..|+.+|.+++|..
T Consensus 64 ~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~--~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 64 EFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYD--PDSVKTIITLGTPHR 124 (225)
T ss_pred HHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccc--cccEEEEEEEcCCCC
Confidence 33444455544443 22345899999999999999888763211 457999999998753
No 121
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.54 E-value=1e-05 Score=83.04 Aligned_cols=57 Identities=16% Similarity=0.151 Sum_probs=43.9
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 008186 502 PILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 568 (574)
Q Consensus 502 PvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~ 568 (574)
.+.+|.+++|..||...+..+.+.+|++ ++..+ ..||..-+.. ..+.+-+.|.+=++
T Consensus 291 ~ii~V~A~~DaYVPr~~v~~Lq~~WPGs--EvR~l------~gGHVsA~L~--~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 291 AIIFVAAKNDAYVPRHGVLSLQEIWPGS--EVRYL------PGGHVSAYLL--HQEAFRQAIYDAFE 347 (348)
T ss_pred cEEEEEecCceEechhhcchHHHhCCCC--eEEEe------cCCcEEEeee--chHHHHHHHHHHhh
Confidence 5889999999999999999999999999 66666 2266654443 34777788877654
No 122
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.53 E-value=1.3e-06 Score=81.89 Aligned_cols=149 Identities=16% Similarity=0.191 Sum_probs=92.1
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCCchhHHHhhccccChhhh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQA 411 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~~~~~l~~~~~~~~~~~~ 411 (574)
.|+...++++.+.+.- ..++.+-|||.|+.+++.+..+- +.++|.+++++++..+...
T Consensus 119 ~~~~~gv~filk~~~n-~k~l~~gGHSaGAHLa~qav~R~----r~prI~gl~l~~GvY~l~E----------------- 176 (270)
T KOG4627|consen 119 TQFTHGVNFILKYTEN-TKVLTFGGHSAGAHLAAQAVMRQ----RSPRIWGLILLCGVYDLRE----------------- 176 (270)
T ss_pred HHHHHHHHHHHHhccc-ceeEEEcccchHHHHHHHHHHHh----cCchHHHHHHHhhHhhHHH-----------------
Confidence 6777788888776542 22678889999999999988773 4789999999887643210
Q ss_pred cCCCccchHhHHHHhCCCCCCchhHHHHHhhhhcccccCCHHHHHHHHhhcccCCcHHHHHHHHHHHHcCCcccCCCccc
Q 008186 412 LNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFF 491 (574)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (574)
+ .+.-.+..-..+.+..+.. -.
T Consensus 177 --------------L-------------~~te~g~dlgLt~~~ae~~-------------------------------Sc 198 (270)
T KOG4627|consen 177 --------------L-------------SNTESGNDLGLTERNAESV-------------------------------SC 198 (270)
T ss_pred --------------H-------------hCCccccccCcccchhhhc-------------------------------Cc
Confidence 0 0000000000000000000 00
Q ss_pred cccccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccc-cchhhHHHHHHHHH
Q 008186 492 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGR-MAVEQVYPCIVQFL 567 (574)
Q Consensus 492 ~~~~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~-~~pe~v~~~Il~FL 567 (574)
....+..+++|+|++.|++|.---.+.-+.+...+..+ ++..+ ++++|++.+... .....++..+.+|+
T Consensus 199 dl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a--~~~~f-----~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 199 DLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKA--SFTLF-----KNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred cHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhc--ceeec-----CCcchhhHHHHhccccchHHHHHHHHh
Confidence 12346778899999999999765567778888887777 77877 788888765431 12244555665554
No 123
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.52 E-value=8.9e-07 Score=83.29 Aligned_cols=56 Identities=27% Similarity=0.338 Sum_probs=43.1
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccC
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 389 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~ 389 (574)
..|+..+|++.+++.+.+ +++|||+|+|+-+.-....+.+.. ...+|..++++++.
T Consensus 51 a~Dl~~~i~~y~~~w~~~--~vvLiGYSFGADvlP~~~nrLp~~-~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 51 AADLARIIRHYRARWGRK--RVVLIGYSFGADVLPFIYNRLPAA-LRARVAQVVLLSPS 106 (192)
T ss_pred HHHHHHHHHHHHHHhCCc--eEEEEeecCCchhHHHHHhhCCHH-HHhheeEEEEeccC
Confidence 499999999999987665 999999999998877776664211 13457778888775
No 124
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.51 E-value=2e-06 Score=93.40 Aligned_cols=55 Identities=24% Similarity=0.218 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
+|-.++|++|.++ ....+++..+|.|++|...+.+|+.. |+.++.++...+..+.
T Consensus 107 ~Dg~D~I~Wia~Q-pWsNG~Vgm~G~SY~g~tq~~~Aa~~-----pPaLkai~p~~~~~D~ 161 (563)
T COG2936 107 EDGYDTIEWLAKQ-PWSNGNVGMLGLSYLGFTQLAAAALQ-----PPALKAIAPTEGLVDR 161 (563)
T ss_pred cchhHHHHHHHhC-CccCCeeeeecccHHHHHHHHHHhcC-----Cchheeeccccccccc
Confidence 7777888888774 33445999999999999999999984 8889998888877664
No 125
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.51 E-value=4.3e-07 Score=88.78 Aligned_cols=55 Identities=24% Similarity=0.359 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
+-+..++++++.+...+.+++.++|.|.||-+++.+|+.+ +.|+.+|.++|+...
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~------~~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRF------PQISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHS------SSEEEEEEES--SB-
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcC------CCccEEEEeCCceeE
Confidence 4567789999887666666999999999999999999995 489999999987544
No 126
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.51 E-value=2.8e-06 Score=86.27 Aligned_cols=51 Identities=12% Similarity=0.066 Sum_probs=42.4
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 389 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~ 389 (574)
...+.++..+..+.|.+ +.++-|-.||+.|+..+|..| |++|.++=+-.+.
T Consensus 213 ~a~ArvmrkLMlRLg~n--kffiqGgDwGSiI~snlasLy-----PenV~GlHlnm~~ 263 (469)
T KOG2565|consen 213 AATARVMRKLMLRLGYN--KFFIQGGDWGSIIGSNLASLY-----PENVLGLHLNMCF 263 (469)
T ss_pred HHHHHHHHHHHHHhCcc--eeEeecCchHHHHHHHHHhhc-----chhhhHhhhcccc
Confidence 44566788888888877 999999999999999999998 9999987664443
No 127
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.50 E-value=1.7e-06 Score=83.78 Aligned_cols=61 Identities=28% Similarity=0.383 Sum_probs=53.7
Q ss_pred chhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 328 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 328 ~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
++. ..+..++.+|+.+++.+ ++.+|||||||.-...|+..|+....-+.+.++|.|+++..
T Consensus 117 ~~s-~wlk~~msyL~~~Y~i~--k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 117 DQS-KWLKKAMSYLQKHYNIP--KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred hHH-HHHHHHHHHHHHhcCCc--eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 443 77889999999999988 99999999999999999999987766788999999998753
No 128
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.39 E-value=7.5e-07 Score=86.85 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=30.5
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 370 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~ 370 (574)
.++.++|+.++..+|. |+.+|||||||.++-.+...
T Consensus 60 ~~l~~fI~~Vl~~TGa---kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 60 KQLRAFIDAVLAYTGA---KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HHHHHHHHHHHHHHT-----EEEEEETCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCC---EEEEEEcCCcCHHHHHHHHH
Confidence 7888999999998875 89999999999999888764
No 129
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.35 E-value=8.2e-06 Score=87.92 Aligned_cols=65 Identities=18% Similarity=0.190 Sum_probs=44.4
Q ss_pred CCCceEEEEEeCCCCCCCCCCCc-EEEecccccCceeeecCCCC--cHHHHhhhCCceEEEEeccCCc
Q 008186 89 NCDWRLALWRYNPPPQAPTRNHP-LLLLSGVGTNAIGYDLSPGS--SFARYMAGQGFDTWILEVRGAG 153 (574)
Q Consensus 89 ~~~~~l~~~~~~p~~~~~~~~~p-~~llhG~~~~~~~~~~~~~~--~~~~~l~~~g~~v~~~d~rg~G 153 (574)
.+|..++...|.|..-.+-.+.| ++.+-|-..--..++.-.+. --...|+.+||-||.+|.||.-
T Consensus 621 ~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~ 688 (867)
T KOG2281|consen 621 KTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSA 688 (867)
T ss_pred CCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCcc
Confidence 37899999999998765545566 77888866533333221111 1134678899999999999854
No 130
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.35 E-value=1e-05 Score=73.12 Aligned_cols=40 Identities=20% Similarity=0.234 Sum_probs=30.6
Q ss_pred CcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCC
Q 008186 110 HPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGA 152 (574)
Q Consensus 110 ~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~ 152 (574)
..|||-||.+.+-..-.+ ...|..++.+|+.|..++++-.
T Consensus 15 ~tilLaHGAGasmdSt~m---~~~a~~la~~G~~vaRfefpYm 54 (213)
T COG3571 15 VTILLAHGAGASMDSTSM---TAVAAALARRGWLVARFEFPYM 54 (213)
T ss_pred EEEEEecCCCCCCCCHHH---HHHHHHHHhCceeEEEeecchh
Confidence 348999999886543322 3678899999999999998654
No 131
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.33 E-value=7.5e-06 Score=75.55 Aligned_cols=65 Identities=17% Similarity=0.161 Sum_probs=45.0
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 008186 497 HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 569 (574)
Q Consensus 497 ~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~ 569 (574)
.++.-|.+++..++|++++++.++.+.+.+++. ++.+ ++.||+--=.+.....+.+..+.+|+.+
T Consensus 114 ~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~---lv~~-----g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 114 EPLPFPSVVVASRNDPYVSYEHAEDLANAWGSA---LVDV-----GEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred ccCCCceeEEEecCCCCCCHHHHHHHHHhccHh---heec-----ccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 344569999999999999999999999999864 4444 5666642222223445566666666654
No 132
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.31 E-value=3.8e-06 Score=86.39 Aligned_cols=57 Identities=21% Similarity=0.204 Sum_probs=42.6
Q ss_pred CCceEEEEEeCCCCCCC---CCCCc-EEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccC
Q 008186 90 CDWRLALWRYNPPPQAP---TRNHP-LLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRG 151 (574)
Q Consensus 90 ~~~~l~~~~~~p~~~~~---~~~~p-~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg 151 (574)
.+-++.++.|.|..... ...-| |+|=||.|.+..+|+ .+|.+|++.||-|-++|++|
T Consensus 48 r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~f~-----~~A~~lAs~Gf~Va~~~hpg 108 (365)
T COG4188 48 RDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTGFA-----WLAEHLASYGFVVAAPDHPG 108 (365)
T ss_pred cCCccccceeccCCCccccccCcCCeEEecCCCCCCccchh-----hhHHHHhhCceEEEeccCCC
Confidence 35566677777764321 12345 678899999977775 57999999999999999998
No 133
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.23 E-value=1.6e-05 Score=75.91 Aligned_cols=62 Identities=23% Similarity=0.318 Sum_probs=47.6
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 008186 496 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 496 l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~ 570 (574)
...|++|.|-|.|+.|.++|.+.+..|++.++++ .+.. +.++|... +...+.+.|.+||+..
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a--~vl~---HpggH~VP--------~~~~~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA--TVLE---HPGGHIVP--------NKAKYKEKIADFIQSF 220 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHHHHHhcCCC--eEEe---cCCCccCC--------CchHHHHHHHHHHHHH
Confidence 4578899999999999999999999999999987 4333 23344443 4457778888888764
No 134
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.23 E-value=3.9e-05 Score=76.08 Aligned_cols=48 Identities=23% Similarity=0.327 Sum_probs=42.3
Q ss_pred HHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCC
Q 008186 338 MEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 390 (574)
Q Consensus 338 Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~ 390 (574)
.+.+..+++++..+++++|.|+||.-++.++.++ |+.+++.+++++..
T Consensus 257 ~~vlas~ynID~sRIYviGlSrG~~gt~al~~kf-----PdfFAaa~~iaG~~ 304 (387)
T COG4099 257 LEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKF-----PDFFAAAVPIAGGG 304 (387)
T ss_pred HHHHhhccCcccceEEEEeecCcchhhHHHHHhC-----chhhheeeeecCCC
Confidence 3367778888888999999999999999999997 99999999998763
No 135
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.23 E-value=3.8e-06 Score=82.02 Aligned_cols=40 Identities=28% Similarity=0.459 Sum_probs=27.5
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEE
Q 008186 496 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVF 536 (574)
Q Consensus 496 l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii 536 (574)
-.+|++|+|.|+|++|.+++++..+.+.+.+.+. .++...
T Consensus 157 ~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~-~~v~~h 196 (212)
T PF03959_consen 157 EPKISIPTLHVIGENDPVVPPERSEALAEMFDPD-ARVIEH 196 (212)
T ss_dssp -TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH-EEEEEE
T ss_pred cccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC-cEEEEE
Confidence 3567899999999999999999999999888762 355553
No 136
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.18 E-value=4.8e-06 Score=89.57 Aligned_cols=58 Identities=24% Similarity=0.319 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
+++.+.|+.+....+.. |++||||||||.++..++..++.. ....|+++|.|+++..-
T Consensus 146 ~~Lk~lIe~~~~~~g~~--kV~LVGHSMGGlva~~fl~~~p~~-~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 146 DGLKKKLETVYKASGGK--KVNIISHSMGGLLVKCFMSLHSDV-FEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HHHHHHHHHHHHHcCCC--CEEEEEECHhHHHHHHHHHHCCHh-HHhHhccEEEECCCCCC
Confidence 77888888887776654 999999999999999999875211 12458899999887543
No 137
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.17 E-value=1.6e-05 Score=81.36 Aligned_cols=38 Identities=24% Similarity=0.402 Sum_probs=29.8
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhCC--C-CceEEEEE
Q 008186 499 CNIPILAIAGDQDLICPPEAVEETVKLLP--E-DLVTYKVF 536 (574)
Q Consensus 499 I~vPvLII~Ge~D~vvp~e~~~~l~~~lp--~-a~~~l~ii 536 (574)
-++|++|.+|..|.++|+.....+.+.+- + ..++++.+
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~ 258 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRY 258 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEec
Confidence 36899999999999999998888876542 3 35677765
No 138
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.17 E-value=1.8e-05 Score=97.37 Aligned_cols=41 Identities=10% Similarity=0.174 Sum_probs=34.3
Q ss_pred CCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCccc
Q 008186 109 NHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLS 155 (574)
Q Consensus 109 ~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G~S 155 (574)
++|++|+||+++++..|. .++++|.. ++.|+.+|.+|+|.+
T Consensus 1068 ~~~l~~lh~~~g~~~~~~-----~l~~~l~~-~~~v~~~~~~g~~~~ 1108 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFS-----VLSRYLDP-QWSIYGIQSPRPDGP 1108 (1296)
T ss_pred CCCeEEecCCCCchHHHH-----HHHHhcCC-CCcEEEEECCCCCCC
Confidence 467999999999988874 57787754 599999999999855
No 139
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.13 E-value=1.9e-05 Score=77.12 Aligned_cols=94 Identities=20% Similarity=0.268 Sum_probs=65.2
Q ss_pred HHHHhHHHHHHHHhcCcEEeccccchhhhhcccchhHHhhcccceeccCCCccchhhhhHHHHHHHHHHhc--------C
Q 008186 275 QIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS--------K 346 (574)
Q Consensus 275 ~~~~~~~~l~~~~~~Gy~vi~pdl~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~a~~Dl~a~Id~l~~~~--------g 346 (574)
.-+.+.+-|--++..||.|++|+++....+.+ .++ + ++..++++++...+ .
T Consensus 58 ~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~-------------------~~E-i-~~aa~V~~WL~~gL~~~Lp~~V~ 116 (307)
T PF07224_consen 58 YNSFYSQLLAHIASHGFIVVAPQLYTLFPPDG-------------------QDE-I-KSAASVINWLPEGLQHVLPENVE 116 (307)
T ss_pred hhHHHHHHHHHHhhcCeEEEechhhcccCCCc-------------------hHH-H-HHHHHHHHHHHhhhhhhCCCCcc
Confidence 34445555555699999999999987422211 112 2 67778888876532 1
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 347 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 347 ~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
.+..++.++|||.||-.+.++|..|. . .-.+.++|.|.|..+.
T Consensus 117 ~nl~klal~GHSrGGktAFAlALg~a-~--~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 117 ANLSKLALSGHSRGGKTAFALALGYA-T--SLKFSALIGIDPVAGT 159 (307)
T ss_pred cccceEEEeecCCccHHHHHHHhccc-c--cCchhheecccccCCC
Confidence 23458999999999999999999864 1 3468889988887543
No 140
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.09 E-value=0.00038 Score=75.95 Aligned_cols=61 Identities=21% Similarity=0.235 Sum_probs=39.6
Q ss_pred hhHHHHHHHHHHhcCC-CCCcEEEEEeChhHHHHHHHHHhcCC-C----CCchhhcceeEEccCCCC
Q 008186 332 EDVPAAMEYIRAQSKP-KDGKLLAIGHSMGGILLYAMLSRCGF-E----GRESRLAAIVTLASSLDY 392 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~-~~~ki~LVGHSmGG~ial~~A~~~~~-~----~~p~~v~~lVlLap~~~~ 392 (574)
+|+.++++....+++. ...+++|+|||+||..+..+|.+--. . ...-.++++++-++..+.
T Consensus 152 ~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 152 EDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred HHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 7777788776554432 23489999999999999888775210 0 012246777776665543
No 141
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.82 E-value=0.00012 Score=69.25 Aligned_cols=62 Identities=18% Similarity=0.297 Sum_probs=44.5
Q ss_pred CCCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 323 DWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 323 d~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
.|.+-+|+.+++.+++..- ..+.+..++.+.||||||.=++..+.+. +.+.+++-..+|...
T Consensus 116 ~yrMYdYv~kELp~~l~~~--~~pld~~k~~IfGHSMGGhGAl~~~Lkn-----~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 116 HYRMYDYVVKELPQLLNSA--NVPLDPLKVGIFGHSMGGHGALTIYLKN-----PSKYKSVSAFAPICN 177 (283)
T ss_pred hhhHHHHHHHHHHHHhccc--cccccchhcceeccccCCCceEEEEEcC-----cccccceeccccccC
Confidence 4677788777777776642 2234555899999999999888877763 777777777776544
No 142
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.81 E-value=0.0011 Score=68.63 Aligned_cols=67 Identities=24% Similarity=0.405 Sum_probs=47.9
Q ss_pred ccccceeeecCCCceEEEEEeCCCCCCCCCCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccC
Q 008186 79 ADELHYVSVANCDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRG 151 (574)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg 151 (574)
.+|+.+..+. ++--+++|+ |...+. ..+.||+|||.+.++..-.. ...+.+.|.+.|+.++.+-++.
T Consensus 61 ~~e~~~L~~~-~~~flaL~~--~~~~~~-~~G~vIilp~~g~~~d~p~~--i~~LR~~L~~~GW~Tlsit~P~ 127 (310)
T PF12048_consen 61 ADEVQWLQAG-EERFLALWR--PANSAK-PQGAVIILPDWGEHPDWPGL--IAPLRRELPDHGWATLSITLPD 127 (310)
T ss_pred HhhcEEeecC-CEEEEEEEe--cccCCC-CceEEEEecCCCCCCCcHhH--HHHHHHHhhhcCceEEEecCCC
Confidence 4788888874 555567765 332222 35679999999998753222 1368889999999999999998
No 143
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.80 E-value=0.0017 Score=63.13 Aligned_cols=55 Identities=22% Similarity=0.384 Sum_probs=40.0
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 390 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~ 390 (574)
+.+..-++.+++..+. +.|++++|||.|+++.+.++..- ...-.|.+.+++-|.+
T Consensus 93 ~QV~HKlaFik~~~Pk-~~ki~iiGHSiGaYm~Lqil~~~---k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 93 DQVDHKLAFIKEYVPK-DRKIYIIGHSIGAYMVLQILPSI---KLVFSVQKAVLLFPTI 147 (301)
T ss_pred hHHHHHHHHHHHhCCC-CCEEEEEecchhHHHHHHHhhhc---ccccceEEEEEecchH
Confidence 5566677777766543 34899999999999999998631 1134688888887754
No 144
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.76 E-value=5.3e-05 Score=78.88 Aligned_cols=59 Identities=12% Similarity=0.083 Sum_probs=40.6
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 393 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~ 393 (574)
..+..+|..|....+.+.++++|||||+||.++-.++..... ..+|.+++.|.|+...-
T Consensus 132 ~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~---~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 132 RQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKG---GGKIGRITGLDPAGPLF 190 (331)
T ss_dssp HHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT------SSEEEEES-B-TTT
T ss_pred HHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccC---cceeeEEEecCcccccc
Confidence 556667777776566666799999999999999999887521 23799999999876543
No 145
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.73 E-value=0.00023 Score=71.08 Aligned_cols=54 Identities=19% Similarity=0.181 Sum_probs=49.3
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 390 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~ 390 (574)
.+|.++++.+..++++++.++++.|.|-||.++..++..+ |+.+.++..+++..
T Consensus 126 gflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~-----p~~faa~A~VAg~~ 179 (312)
T COG3509 126 GFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEY-----PDIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcC-----cccccceeeeeccc
Confidence 7789999999999999999999999999999999999997 88899988887654
No 146
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.73 E-value=0.00016 Score=71.70 Aligned_cols=60 Identities=20% Similarity=0.341 Sum_probs=43.9
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCC----chhhcceeEEccCCCC
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGR----ESRLAAIVTLASSLDY 392 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~----p~~v~~lVlLap~~~~ 392 (574)
..++..+|+.+....+.. ++++++||||+.+.+..+........ ...+..+|+++|-++.
T Consensus 76 ~~~l~~~L~~L~~~~~~~--~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 76 GPALARFLRDLARAPGIK--RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred HHHHHHHHHHHHhccCCc--eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 367778888887764444 99999999999999998765333221 2367889999887653
No 147
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.71 E-value=0.00011 Score=73.45 Aligned_cols=53 Identities=19% Similarity=0.303 Sum_probs=39.7
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 335 PAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 335 ~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
.+.++.|++.. +.++.+|+|||+||.+++.+|.+.... -..|..+++|.+...
T Consensus 52 ~~yv~~Ir~~Q--P~GPy~L~G~S~GG~vA~evA~qL~~~--G~~Va~L~llD~~~~ 104 (257)
T COG3319 52 AAYVAAIRRVQ--PEGPYVLLGWSLGGAVAFEVAAQLEAQ--GEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHhC--CCCCEEEEeeccccHHHHHHHHHHHhC--CCeEEEEEEeccCCC
Confidence 44555565553 344999999999999999999875444 346888999987765
No 148
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.68 E-value=8.5e-05 Score=74.03 Aligned_cols=52 Identities=25% Similarity=0.392 Sum_probs=41.1
Q ss_pred HHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 336 AAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 336 a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
+++.+|+.+++....+..++|+||||..++.++.+| |+.+.++++++|....
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~-----Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRH-----PDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHS-----TTTESEEEEESEESET
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhC-----ccccccccccCccccc
Confidence 455555566654433489999999999999999997 9999999999987543
No 149
>PRK04940 hypothetical protein; Provisional
Probab=97.65 E-value=0.0021 Score=60.54 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=29.1
Q ss_pred cEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 351 KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 351 ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
++.+||.|+||..|..++.+|+ -+.|+|+|.+.+
T Consensus 61 ~~~liGSSLGGyyA~~La~~~g--------~~aVLiNPAv~P 94 (180)
T PRK04940 61 RPLICGVGLGGYWAERIGFLCG--------IRQVIFNPNLFP 94 (180)
T ss_pred CcEEEEeChHHHHHHHHHHHHC--------CCEEEECCCCCh
Confidence 7899999999999999999872 367888998754
No 150
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.60 E-value=0.0046 Score=63.28 Aligned_cols=40 Identities=30% Similarity=0.556 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHh-cCCCCCcEEEEEeChhHHHHHHHHHhc
Q 008186 332 EDVPAAMEYIRAQ-SKPKDGKLLAIGHSMGGILLYAMLSRC 371 (574)
Q Consensus 332 ~Dl~a~Id~l~~~-~g~~~~ki~LVGHSmGG~ial~~A~~~ 371 (574)
.|..+++++++.+ .|.+...+++-|||+||.++..++.++
T Consensus 196 ~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 196 KDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 8888999999864 355556899999999999998876653
No 151
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.59 E-value=0.00043 Score=69.26 Aligned_cols=44 Identities=23% Similarity=0.383 Sum_probs=36.2
Q ss_pred CCCc-EEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCcccC
Q 008186 108 RNHP-LLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSV 156 (574)
Q Consensus 108 ~~~p-~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G~S~ 156 (574)
.+-| |||-||++++..-| ..++-.|+.+||-|-++++|.+-.+.
T Consensus 116 ~k~PvvvFSHGLggsRt~Y-----Sa~c~~LAShG~VVaavEHRD~SA~~ 160 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTLY-----SAYCTSLASHGFVVAAVEHRDRSACW 160 (399)
T ss_pred CCccEEEEecccccchhhH-----HHHhhhHhhCceEEEEeecccCccee
Confidence 3456 78999999988777 46888899999999999999876543
No 152
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.56 E-value=0.0032 Score=67.71 Aligned_cols=49 Identities=16% Similarity=0.277 Sum_probs=37.9
Q ss_pred HHHHHHHhcCC--CCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCC
Q 008186 337 AMEYIRAQSKP--KDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 390 (574)
Q Consensus 337 ~Id~l~~~~g~--~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~ 390 (574)
++-+|.++++. +.++.+++|+||||..++.++.+| |+.+.+++.+++..
T Consensus 273 LlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~-----Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 273 LLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHW-----PERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhC-----cccccEEEEeccce
Confidence 33444444332 334789999999999999999997 99999999999864
No 153
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.45 E-value=0.0019 Score=64.06 Aligned_cols=249 Identities=16% Similarity=0.253 Sum_probs=133.5
Q ss_pred hhHHhhc-ccceeccCCCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEc
Q 008186 309 IDDFQKQ-LDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLA 387 (574)
Q Consensus 309 ~~~~~~~-~~~~~~~d~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLa 387 (574)
+.+|... .-.+....|++++|+ +-+.++|+++ |. .+++++-|+-+.-++++.+.....+.|..-..+++++
T Consensus 135 itDW~dAr~Vp~~~G~FdldDYI-dyvie~~~~~----Gp---~~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmG 206 (415)
T COG4553 135 ITDWVDARMVPLEAGHFDLDDYI-DYVIEMINFL----GP---DAHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMG 206 (415)
T ss_pred EeeccccceeecccCCccHHHHH-HHHHHHHHHh----CC---CCcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeec
Confidence 4556552 233344457788886 7777777776 22 5899999998887777666544444455678899999
Q ss_pred cCCCCCCchhHHHhhcccc--------------ChhhhcCCCccchHhHHHHhCCCCCCch--hHHHHHhhhhcccccCC
Q 008186 388 SSLDYTSSKSTLKLLLPLA--------------DPAQALNVPVVPLGALLTAAYPLSSSPP--YVFSWLNNLISAEDMMH 451 (574)
Q Consensus 388 p~~~~~~~~~~l~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~ 451 (574)
++++........+.+.... .++..++....+---.+..+........ .-.+++..+...... +
T Consensus 207 gPIDaR~nPTavN~lA~~k~~~WF~~n~vm~vP~~ypg~gR~VYPGFlQlagFmsmNldrH~~aH~~~~~~Lv~~D~~-~ 285 (415)
T COG4553 207 GPIDARKNPTAVNELATEKSIEWFRDNVVMQVPPPYPGFGRRVYPGFLQLAGFMSMNLDRHIDAHKDFFLSLVKNDGD-S 285 (415)
T ss_pred CccccccCcHHHhHhhhccchHHHHhCeeeecCCCCCCccccccccHHHhhhHhhcChhhhHHHHHHHHHHHHcccch-h
Confidence 9988766554443322111 1111122111111111111111111111 112333333333221 1
Q ss_pred HHHHHHHHhhcc--cCCcHHHHHHHHHHHHcCCcccCCCccccc---cccCCCC-CcEEEEEeCCCCCCCH---HHHHHH
Q 008186 452 PELLKKLVLNNF--CTIPAKLILQLTTAFREGGLRDRGGKFFYK---DHIHKCN-IPILAIAGDQDLICPP---EAVEET 522 (574)
Q Consensus 452 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~I~-vPvLII~Ge~D~vvp~---e~~~~l 522 (574)
-+.-.+++.... ..++++.+.+-.+..... +.-..|.+... -....|+ |-.+-|-|+.|.+.-. +.+..+
T Consensus 286 Ae~h~~FYdEYlavmdl~aEfYLqTid~VFqq-~~LpkG~~vhrg~~vdp~~I~~~aL~tvEGEnDDIsgvGQTkAA~~L 364 (415)
T COG4553 286 AEKHREFYDEYLAVMDLTAEFYLQTIDEVFQQ-HALPKGEMVHRGKPVDPTAITNVALFTVEGENDDISGVGQTKAAHDL 364 (415)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHHHHH-hcccCCceeecCCcCChhheeceeEEEeecccccccccchhHHHHHH
Confidence 222223333222 234555554444322110 00011111111 1233443 6788899999998654 467777
Q ss_pred HHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhhcC
Q 008186 523 VKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 572 (574)
Q Consensus 523 ~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~~~ 572 (574)
...+|...+.... .++.||++.+.+..-++++++.|.+|+.+++.
T Consensus 365 C~nIpe~mk~hy~-----qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~ 409 (415)
T COG4553 365 CSNIPEDMKQHYM-----QPDVGHYGVFNGSRFREEIVPRIRDFIRRYDR 409 (415)
T ss_pred HhcChHHHHHHhc-----CCCCCccceeccchHHHHHHHHHHHHHHHhCc
Confidence 7788865444443 37788888888999999999999999998864
No 154
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.43 E-value=0.00051 Score=74.53 Aligned_cols=57 Identities=12% Similarity=0.209 Sum_probs=43.8
Q ss_pred hhhhHHHHHHHHHHhcC-CCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 330 LEEDVPAAMEYIRAQSK-PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 330 a~~Dl~a~Id~l~~~~g-~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
+..|++.++++++.++. .+..|++++|-|.||+++..+-.+| |+.+.+.|.-++++.
T Consensus 92 ALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~ky-----P~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 92 ALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKY-----PHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH------TTT-SEEEEET--CC
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhC-----CCeeEEEEeccceee
Confidence 35999999999997653 2345899999999999999999998 899999998887664
No 155
>PLN02606 palmitoyl-protein thioesterase
Probab=97.42 E-value=0.0024 Score=64.74 Aligned_cols=35 Identities=14% Similarity=0.327 Sum_probs=30.6
Q ss_pred cEEEEEeChhHHHHHHHHHhcCCCCCc-hhhcceeEEccC
Q 008186 351 KLLAIGHSMGGILLYAMLSRCGFEGRE-SRLAAIVTLASS 389 (574)
Q Consensus 351 ki~LVGHSmGG~ial~~A~~~~~~~~p-~~v~~lVlLap~ 389 (574)
-+++||+|+||.++-.++.+|. . +.|..+|.++++
T Consensus 96 G~naIGfSQGglflRa~ierc~----~~p~V~nlISlggp 131 (306)
T PLN02606 96 GYNIVAESQGNLVARGLIEFCD----NAPPVINYVSLGGP 131 (306)
T ss_pred ceEEEEEcchhHHHHHHHHHCC----CCCCcceEEEecCC
Confidence 5999999999999999999972 2 469999999875
No 156
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.40 E-value=0.0044 Score=59.36 Aligned_cols=55 Identities=22% Similarity=0.310 Sum_probs=42.2
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
+|+..++++|...-.. .+++|+|||.|+.-.+.|+..- ..+..+...|+.+|..+
T Consensus 91 edl~~l~~Hi~~~~fS--t~vVL~GhSTGcQdi~yYlTnt---~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 91 EDLKCLLEHIQLCGFS--TDVVLVGHSTGCQDIMYYLTNT---TKDRKIRAAILQAPVSD 145 (299)
T ss_pred HHHHHHHHHhhccCcc--cceEEEecCccchHHHHHHHhc---cchHHHHHHHHhCccch
Confidence 8999999988765222 2799999999999999888431 12667888888888765
No 157
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.39 E-value=0.0026 Score=64.56 Aligned_cols=35 Identities=17% Similarity=0.373 Sum_probs=30.5
Q ss_pred cEEEEEeChhHHHHHHHHHhcCCCCCc-hhhcceeEEccC
Q 008186 351 KLLAIGHSMGGILLYAMLSRCGFEGRE-SRLAAIVTLASS 389 (574)
Q Consensus 351 ki~LVGHSmGG~ial~~A~~~~~~~~p-~~v~~lVlLap~ 389 (574)
-+++||||+||.++-.++.+|. . +.|..+|.++++
T Consensus 95 G~naIGfSQGGlflRa~ierc~----~~p~V~nlISlggp 130 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLIEFCD----GGPPVYNYISLAGP 130 (314)
T ss_pred cEEEEEEccchHHHHHHHHHCC----CCCCcceEEEecCC
Confidence 5999999999999999999972 2 469999999875
No 158
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.37 E-value=0.0024 Score=70.41 Aligned_cols=58 Identities=14% Similarity=0.173 Sum_probs=43.6
Q ss_pred hhhHHHHHHHHHHh---cCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 331 EEDVPAAMEYIRAQ---SKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~---~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
..|..++++++++. +|.++.+++++|+|.||..+..++.... .+..+.++|++++...
T Consensus 154 ~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~---~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 154 LKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPD---SKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcc---hhHHHHHHhhhcCCcc
Confidence 36777777777663 4667779999999999999988877521 1456889998886543
No 159
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.36 E-value=0.0048 Score=61.28 Aligned_cols=64 Identities=22% Similarity=0.267 Sum_probs=50.3
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCC--CceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHH
Q 008186 497 HKCNIPILAIAGDQDLICPPEAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 567 (574)
Q Consensus 497 ~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~--a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL 567 (574)
....+|-|+++++.|.+++.+.++++.+.... ..++.+.+ ++.+|.+|+- ..|+++++.+.+|+
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f--~~S~HV~H~r-----~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKF--EDSPHVAHLR-----KHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecC--CCCchhhhcc-----cCHHHHHHHHHhhC
Confidence 34568999999999999999988887765543 33455555 7788888875 58999999999985
No 160
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.35 E-value=0.00024 Score=54.99 Aligned_cols=47 Identities=26% Similarity=0.327 Sum_probs=31.1
Q ss_pred cccceeeecCCCceEEEEEeCCCC---CCCCCCCcEEEecccccCceeeec
Q 008186 80 DELHYVSVANCDWRLALWRYNPPP---QAPTRNHPLLLLSGVGTNAIGYDL 127 (574)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~~p~~---~~~~~~~p~~llhG~~~~~~~~~~ 127 (574)
-|.|+|.+. ||+-|.++|..++. .....++||+|.||+..++..|-+
T Consensus 12 ~E~h~V~T~-DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv~ 61 (63)
T PF04083_consen 12 CEEHEVTTE-DGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWVL 61 (63)
T ss_dssp -EEEEEE-T-TSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGCS
T ss_pred cEEEEEEeC-CCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHHc
Confidence 378999998 99999999998776 123357889999999999998854
No 161
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.03 E-value=0.0031 Score=64.87 Aligned_cols=62 Identities=19% Similarity=0.400 Sum_probs=48.0
Q ss_pred hhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCC---CchhhcceeEEccCCCC
Q 008186 329 YLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEG---RESRLAAIVTLASSLDY 392 (574)
Q Consensus 329 ~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~---~p~~v~~lVlLap~~~~ 392 (574)
|...+++.+|.+|.+..+.+ ++++++||||..+++..+.+....+ .+.+++.+|+-+|-++.
T Consensus 172 ~Sr~aLe~~lr~La~~~~~~--~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 172 YSRPALERLLRYLATDKPVK--RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred hhHHHHHHHHHHHHhCCCCc--eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 34588999999999886655 8999999999999998876533322 25678888888887653
No 162
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.03 E-value=0.0015 Score=69.81 Aligned_cols=60 Identities=18% Similarity=0.371 Sum_probs=45.8
Q ss_pred chhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCC-CchhhcceeEEccCCC
Q 008186 328 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEG-RESRLAAIVTLASSLD 391 (574)
Q Consensus 328 ~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~-~p~~v~~lVlLap~~~ 391 (574)
++. ..+...|+.+....+ .|++||||||||.++..++....... ....|+++|.++++..
T Consensus 101 ~~~-~~lk~~ie~~~~~~~---~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 101 EYF-TKLKQLIEEAYKKNG---KKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHH-HHHHHHHHHHHHhcC---CcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 554 778888888766643 39999999999999999998753221 2457999999998754
No 163
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.03 E-value=0.0013 Score=68.93 Aligned_cols=55 Identities=35% Similarity=0.449 Sum_probs=40.6
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
+.+...|+.+....+.. ++.|+||||||..+..++..++ .+..|+.++.++++-.
T Consensus 111 ~ql~~~V~~~l~~~ga~--~v~LigHS~GG~~~ry~~~~~~---~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 111 EQLFAYVDEVLAKTGAK--KVNLIGHSMGGLDSRYYLGVLG---GANRVASVVTLGTPHH 165 (336)
T ss_pred HHHHHHHHHHHhhcCCC--ceEEEeecccchhhHHHHhhcC---ccceEEEEEEeccCCC
Confidence 44445555555565554 9999999999999998887751 1268999999998643
No 164
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.00 E-value=0.001 Score=65.21 Aligned_cols=20 Identities=40% Similarity=0.639 Sum_probs=17.4
Q ss_pred cEEEEEeChhHHHHHHHHHh
Q 008186 351 KLLAIGHSMGGILLYAMLSR 370 (574)
Q Consensus 351 ki~LVGHSmGG~ial~~A~~ 370 (574)
++.+|||||||.++-.++..
T Consensus 79 ~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYALGL 98 (217)
T ss_pred cceEEEecccHHHHHHHHHH
Confidence 89999999999999766654
No 165
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=96.96 E-value=0.0076 Score=63.28 Aligned_cols=63 Identities=17% Similarity=0.201 Sum_probs=51.1
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 008186 496 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 496 l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~ 570 (574)
..++++|-+||.|..|....++...-+...+|+ .+.+.++ ++.+|.. ....+...+..|+...
T Consensus 258 ~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K~lr~v-----PN~~H~~------~~~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 258 RDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EKYLRYV-----PNAGHSL------IGSDVVQSLRAFYNRI 320 (367)
T ss_pred HHhcCccEEEEecCCCceeccCchHHHHhhCCC-CeeEEeC-----CCCCccc------chHHHHHHHHHHHHHH
Confidence 466789999999999999999999999999998 5577776 7777754 2367888888888763
No 166
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=96.81 E-value=0.022 Score=57.18 Aligned_cols=73 Identities=27% Similarity=0.351 Sum_probs=50.7
Q ss_pred cccCCCC-CcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhhc
Q 008186 494 DHIHKCN-IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 571 (574)
Q Consensus 494 ~~l~~I~-vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~~ 571 (574)
..+.++. +|+|+++|++|.++|......+.+..........++ ....|.+........++..+.+.+|+.++.
T Consensus 225 ~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~-----~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 225 DDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFV-----PGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred hhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEe-----cCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 4455665 799999999999999999999988877632244444 344476543222222378899999998753
No 167
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=96.73 E-value=0.013 Score=63.90 Aligned_cols=57 Identities=28% Similarity=0.237 Sum_probs=44.2
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
.+|+.++.+.|.++--..++++-+.|-|-||.++-..+.++ |+.+.++|+-.|..+|
T Consensus 481 fdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQr-----PelfgA~v~evPllDM 537 (648)
T COG1505 481 FDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQR-----PELFGAAVCEVPLLDM 537 (648)
T ss_pred hHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccC-----hhhhCceeeccchhhh
Confidence 38888888888775222345899999999999998888774 8888888887776654
No 168
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=96.72 E-value=0.0046 Score=58.78 Aligned_cols=37 Identities=32% Similarity=0.424 Sum_probs=28.6
Q ss_pred cEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccC
Q 008186 351 KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 389 (574)
Q Consensus 351 ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~ 389 (574)
+++++|||+||.++..++...... ...+.+++++.+.
T Consensus 65 ~~~l~g~s~Gg~~a~~~a~~l~~~--~~~~~~l~~~~~~ 101 (212)
T smart00824 65 PFVLVGHSSGGLLAHAVAARLEAR--GIPPAAVVLLDTY 101 (212)
T ss_pred CeEEEEECHHHHHHHHHHHHHHhC--CCCCcEEEEEccC
Confidence 899999999999999988864222 3457888877653
No 169
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=96.64 E-value=0.0075 Score=61.25 Aligned_cols=52 Identities=17% Similarity=0.199 Sum_probs=39.8
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 389 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~ 389 (574)
..+.+++++....+|...+.+++.|+|.||.-++.+|..| +.|+++|+=++.
T Consensus 293 nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~Y------PdVkavvLDAtF 344 (517)
T KOG1553|consen 293 NAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNY------PDVKAVVLDATF 344 (517)
T ss_pred HHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcC------CCceEEEeecch
Confidence 3445566666666666666899999999999999999884 578998886653
No 170
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.52 E-value=0.0051 Score=67.34 Aligned_cols=61 Identities=20% Similarity=0.378 Sum_probs=43.7
Q ss_pred cchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCC-------C---CchhhcceeEEccCC
Q 008186 327 DHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFE-------G---RESRLAAIVTLASSL 390 (574)
Q Consensus 327 ~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~-------~---~p~~v~~lVlLap~~ 390 (574)
++|. ..+...|+.+....+.. |++||||||||.+++.++..-... + ....|+++|.|+++.
T Consensus 193 d~YF-~rLK~lIE~ay~~nggk--KVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 193 DQTL-SRLKSNIELMVATNGGK--KVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred hHHH-HHHHHHHHHHHHHcCCC--eEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 4554 67888888887665433 899999999999999987642100 0 134688999998764
No 171
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.47 E-value=0.025 Score=55.95 Aligned_cols=35 Identities=20% Similarity=0.454 Sum_probs=30.3
Q ss_pred cEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccC
Q 008186 351 KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 389 (574)
Q Consensus 351 ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~ 389 (574)
-.++||.|+||.++-+++..+. .+.|..+|.++++
T Consensus 93 Gynivg~SQGglv~Raliq~cd----~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 93 GYNIVGYSQGGLVARALIQFCD----NPPVKNFISLGGP 127 (296)
T ss_pred ceEEEEEccccHHHHHHHHhCC----CCCcceeEeccCC
Confidence 5899999999999999998872 4679999999865
No 172
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.46 E-value=0.013 Score=61.68 Aligned_cols=58 Identities=19% Similarity=0.183 Sum_probs=43.0
Q ss_pred ccchhhhhHHHHHHHHHHhcCCCCC--cEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEcc
Q 008186 326 FDHYLEEDVPAAMEYIRAQSKPKDG--KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLAS 388 (574)
Q Consensus 326 ~~~~a~~Dl~a~Id~l~~~~g~~~~--ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap 388 (574)
|.-|.+-|+..++.++.+..+...+ |++++|+|.||.++...|.-. |..+.+++=-++
T Consensus 158 ~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~a-----P~~~~~~iDns~ 217 (403)
T PF11144_consen 158 FGIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIA-----PWLFDGVIDNSS 217 (403)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhC-----ccceeEEEecCc
Confidence 3445567888888888887654444 999999999999999988773 666666665444
No 173
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.44 E-value=0.011 Score=50.77 Aligned_cols=62 Identities=19% Similarity=0.203 Sum_probs=47.3
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 008186 499 CNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 499 I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~ 570 (574)
-..|+|+|.++.|+++|.+.++.+.+.++++ +++.+ ++.+|..+.. ...-+.+.|.+||..-
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s--~lvt~--~g~gHg~~~~------~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPGS--RLVTV--DGAGHGVYAG------GSPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCCc--eEEEE--eccCcceecC------CChHHHHHHHHHHHcC
Confidence 3589999999999999999999999999987 77776 3334444321 2255778888888753
No 174
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.37 E-value=0.015 Score=63.74 Aligned_cols=57 Identities=25% Similarity=0.360 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 393 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~ 393 (574)
+|+.+..++|...--..+.++.+.|.|-||.++.+.+..+ |+.+..+|+=.|.+++.
T Consensus 531 ~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~r-----PdLF~avia~VpfmDvL 587 (712)
T KOG2237|consen 531 DDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQR-----PDLFGAVIAKVPFMDVL 587 (712)
T ss_pred HHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccC-----chHhhhhhhcCcceehh
Confidence 7888888888765322345899999999999999998874 88888888877776653
No 175
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.27 E-value=0.009 Score=54.88 Aligned_cols=56 Identities=25% Similarity=0.183 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 390 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~ 390 (574)
..+...++....+++.. +++++|||+||.++..++..+.... ...+..++.++++.
T Consensus 12 ~~i~~~~~~~~~~~p~~--~i~v~GHSlGg~lA~l~a~~~~~~~-~~~~~~~~~fg~p~ 67 (153)
T cd00741 12 NLVLPLLKSALAQYPDY--KIHVTGHSLGGALAGLAGLDLRGRG-LGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHCCCC--eEEEEEcCHHHHHHHHHHHHHHhcc-CCCceEEEEeCCCc
Confidence 56666666665544433 8999999999999999988752110 12566778877764
No 176
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.03 E-value=0.21 Score=55.33 Aligned_cols=58 Identities=24% Similarity=0.328 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS 394 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~ 394 (574)
.|+.++.++|.++--...+.++++|-|.||+++...+.. .|+.++++|+-.|.++...
T Consensus 509 ~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~-----~P~lf~~iiA~VPFVDvlt 566 (682)
T COG1770 509 TDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANM-----APDLFAGIIAQVPFVDVLT 566 (682)
T ss_pred HHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhh-----ChhhhhheeecCCccchhh
Confidence 778888888877533334589999999999999999988 3899999999888776543
No 177
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.92 E-value=0.33 Score=48.01 Aligned_cols=60 Identities=18% Similarity=0.201 Sum_probs=44.1
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhhcC
Q 008186 503 ILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 572 (574)
Q Consensus 503 vLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~~~ 572 (574)
+.++.+++|..+|...+..+.+.+|+. ++..+ . +||..-+.. ..+.+-+.|.+-|++.+.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~--eVr~~---e---gGHVsayl~--k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGC--EVRYL---E---GGHVSAYLF--KQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCC--EEEEe---e---cCceeeeeh--hchHHHHHHHHHHHhhhh
Confidence 678899999999998999999999998 55555 1 344322222 347788899988887653
No 178
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.91 E-value=0.016 Score=64.86 Aligned_cols=123 Identities=20% Similarity=0.189 Sum_probs=66.3
Q ss_pred hHhhhhhhhHHHHHHHhHHHHHHHHhcCcEEeccccchhhhhcccchhHHhhcccceeccCCCccchhhhhHHHHHHHHH
Q 008186 263 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 342 (574)
Q Consensus 263 ~~~~~~~~~i~~~~~~~~~~l~~~~~~Gy~vi~pdl~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~a~~Dl~a~Id~l~ 342 (574)
.|=++++++-..|+|.++..--|....|+---+-+...- ..+.--+-|+...+ ...+.-++.+.+ +-+.++|.+|.
T Consensus 92 VLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~-~~~DFFaVDFnEe~--tAm~G~~l~dQt-EYV~dAIk~IL 167 (973)
T KOG3724|consen 92 VLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNP-FSFDFFAVDFNEEF--TAMHGHILLDQT-EYVNDAIKYIL 167 (973)
T ss_pred EEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCc-cccceEEEcccchh--hhhccHhHHHHH-HHHHHHHHHHH
Confidence 455678999999999998877665555541111110000 00000000000000 001112334443 66677777776
Q ss_pred HhcCC-------CCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 343 AQSKP-------KDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 343 ~~~g~-------~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
..+.. .+..+++|||||||.+|.+.+..- . -.+..|.-++.+++|-.
T Consensus 168 slYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlk-n-~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 168 SLYRGEREYASPLPHSVILVGHSMGGIVARATLTLK-N-EVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHhhcccccCCCCCceEEEEeccchhHHHHHHHhhh-h-hccchhhhhhhhcCccc
Confidence 65533 123499999999999999887651 0 02556777777776543
No 179
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=95.87 E-value=0.051 Score=51.92 Aligned_cols=51 Identities=16% Similarity=0.195 Sum_probs=35.8
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEcc
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLAS 388 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap 388 (574)
+-+..++++.- ..|.+..++.+-|+||||.+++..+..| +..+.+++.+.+
T Consensus 76 ~~i~~Li~~e~-~~Gi~~~rI~igGfs~G~a~aL~~~~~~-----~~~l~G~~~~s~ 126 (206)
T KOG2112|consen 76 DNIANLIDNEP-ANGIPSNRIGIGGFSQGGALALYSALTY-----PKALGGIFALSG 126 (206)
T ss_pred HHHHHHHHHHH-HcCCCccceeEcccCchHHHHHHHHhcc-----ccccceeecccc
Confidence 44455555432 3456556899999999999999999886 556666666544
No 180
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.83 E-value=0.035 Score=60.37 Aligned_cols=41 Identities=24% Similarity=0.504 Sum_probs=35.1
Q ss_pred ccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEE
Q 008186 495 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVF 536 (574)
Q Consensus 495 ~l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii 536 (574)
.+-.++.|+|+|.|..|..|+++..+++.+.+.. ..+++++
T Consensus 299 ~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA-~~elhVI 339 (784)
T KOG3253|consen 299 ALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA-EVELHVI 339 (784)
T ss_pred hhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-cceEEEe
Confidence 4556778999999999999999999999998764 5578888
No 181
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.78 E-value=0.086 Score=56.55 Aligned_cols=57 Identities=16% Similarity=0.133 Sum_probs=49.0
Q ss_pred hhhhHHHHHHHHHHhcCCCCC-cEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 330 LEEDVPAAMEYIRAQSKPKDG-KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 330 a~~Dl~a~Id~l~~~~g~~~~-ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
+..|++++|+.+..+++.... |++.+|-|.-|.++..+=.+| |+.+.+.|.-++++.
T Consensus 151 ALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~y-----Pel~~GsvASSapv~ 208 (514)
T KOG2182|consen 151 ALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKY-----PELTVGSVASSAPVL 208 (514)
T ss_pred HHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhC-----chhheeeccccccee
Confidence 349999999999998876544 899999999999999998888 999999998776654
No 182
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.75 E-value=0.013 Score=62.31 Aligned_cols=61 Identities=25% Similarity=0.401 Sum_probs=44.9
Q ss_pred cchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCC---CCchhhcceeEEccCC
Q 008186 327 DHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFE---GRESRLAAIVTLASSL 390 (574)
Q Consensus 327 ~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~---~~p~~v~~lVlLap~~ 390 (574)
++|. ..+...|+..-+..|.+ |++||+|||||.+.+.++..+... =.+..++++|-++++.
T Consensus 162 d~yl-~kLK~~iE~~~~~~G~k--kVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 162 DQYL-SKLKKKIETMYKLNGGK--KVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HHHH-HHHHHHHHHHHHHcCCC--ceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchh
Confidence 4554 77788888777776644 999999999999999999886431 0134577888877654
No 183
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=95.66 E-value=0.18 Score=54.27 Aligned_cols=59 Identities=14% Similarity=0.181 Sum_probs=46.2
Q ss_pred hhhHHHHHHHHHH---hcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 331 EEDVPAAMEYIRA---QSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 331 ~~Dl~a~Id~l~~---~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
..|...+++++++ .+|.+++.|.|+|+|-||+.++.+++... ....+.++|+.++....
T Consensus 158 l~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~---AkGLF~rAi~~Sg~~~~ 219 (491)
T COG2272 158 LLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPS---AKGLFHRAIALSGAASR 219 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCcc---chHHHHHHHHhCCCCCc
Confidence 4777778888776 46778889999999999999998877521 14568899999987753
No 184
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.63 E-value=0.036 Score=54.57 Aligned_cols=77 Identities=17% Similarity=0.203 Sum_probs=47.7
Q ss_pred HHHHHhcCcEEeccccchhhhhcccchhHHhhcccceeccCCCccchhh-----hhHHHHHHHHHHhcCCC--CCcEEEE
Q 008186 283 LVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLE-----EDVPAAMEYIRAQSKPK--DGKLLAI 355 (574)
Q Consensus 283 l~~~~~~Gy~vi~pdl~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~a~-----~Dl~a~Id~l~~~~g~~--~~ki~LV 355 (574)
||.+++.||.||+.-. ..+||++.. +.+..+++.+....+.. .-|++-|
T Consensus 40 Le~La~~Gy~ViAtPy------------------------~~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~v 95 (250)
T PF07082_consen 40 LERLADRGYAVIATPY------------------------VVTFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGV 95 (250)
T ss_pred HHHHHhCCcEEEEEec------------------------CCCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeee
Confidence 3445999999987632 334444331 22334444444433222 2378899
Q ss_pred EeChhHHHHHHHHHhcCCCCCchhhcceeEEcc
Q 008186 356 GHSMGGILLYAMLSRCGFEGRESRLAAIVTLAS 388 (574)
Q Consensus 356 GHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap 388 (574)
|||||+.+-+.+.+.+ +..-++.|+++-
T Consensus 96 GHSlGcklhlLi~s~~-----~~~r~gniliSF 123 (250)
T PF07082_consen 96 GHSLGCKLHLLIGSLF-----DVERAGNILISF 123 (250)
T ss_pred ecccchHHHHHHhhhc-----cCcccceEEEec
Confidence 9999999999888775 333467777764
No 185
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=95.62 E-value=0.022 Score=57.39 Aligned_cols=35 Identities=31% Similarity=0.654 Sum_probs=27.6
Q ss_pred cEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccC
Q 008186 351 KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 389 (574)
Q Consensus 351 ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~ 389 (574)
-+++||+|+||.++-.++.+|. .+.|..+|.++++
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~----~~~V~nlISlggp 115 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCN----DPPVHNLISLGGP 115 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-T----SS-EEEEEEES--
T ss_pred ceeeeeeccccHHHHHHHHHCC----CCCceeEEEecCc
Confidence 5999999999999999999982 4579999999975
No 186
>COG3150 Predicted esterase [General function prediction only]
Probab=95.56 E-value=0.14 Score=47.17 Aligned_cols=48 Identities=21% Similarity=0.301 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 334 VPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 334 l~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
+.+.++.+..+.+.. .+.+||-|+||..+..++.+|+ +++ |+++|.+.
T Consensus 45 a~~ele~~i~~~~~~--~p~ivGssLGGY~At~l~~~~G-------ira-v~~NPav~ 92 (191)
T COG3150 45 ALKELEKAVQELGDE--SPLIVGSSLGGYYATWLGFLCG-------IRA-VVFNPAVR 92 (191)
T ss_pred HHHHHHHHHHHcCCC--CceEEeecchHHHHHHHHHHhC-------Chh-hhcCCCcC
Confidence 333444444443322 6899999999999999999873 333 44566653
No 187
>COG0627 Predicted esterase [General function prediction only]
Probab=95.54 E-value=0.041 Score=56.88 Aligned_cols=65 Identities=18% Similarity=0.322 Sum_probs=49.1
Q ss_pred CCCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCC
Q 008186 323 DWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 393 (574)
Q Consensus 323 d~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~ 393 (574)
.|.+++++..++++.++..-..... .++-.++||||||.=++.+|.+| |+++..+..+++.+...
T Consensus 126 ~~q~~tfl~~ELP~~~~~~f~~~~~-~~~~aI~G~SMGG~GAl~lA~~~-----pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 PYQWETFLTQELPALWEAAFPADGT-GDGRAIAGHSMGGYGALKLALKH-----PDRFKSASSFSGILSPS 190 (316)
T ss_pred ccchhHHHHhhhhHHHHHhcCcccc-cCCceeEEEeccchhhhhhhhhC-----cchhceecccccccccc
Confidence 3678888888888776654321110 02679999999999999999996 78999999998877654
No 188
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.54 E-value=0.033 Score=53.69 Aligned_cols=41 Identities=29% Similarity=0.400 Sum_probs=34.3
Q ss_pred hhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 008186 330 LEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 371 (574)
Q Consensus 330 a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~ 371 (574)
+..|+.++.++..+..+. +++++|+|||+|+.++..++.++
T Consensus 76 ay~DV~~AF~~yL~~~n~-GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNN-GRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hHHHHHHHHHHHHHhcCC-CCCEEEEEeChHHHHHHHHHHHH
Confidence 458999999988777654 35999999999999999998873
No 189
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=95.42 E-value=0.044 Score=49.11 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=29.4
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 371 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~ 371 (574)
+.+.+.++.+..+++. .++++.|||+||.+|..++...
T Consensus 48 ~~~~~~l~~~~~~~~~--~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 48 DQILDALKELVEKYPD--YSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHSTT--SEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccC--ccchhhccchHHHHHHHHHHhh
Confidence 5666666666666553 3899999999999999988864
No 190
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=95.32 E-value=0.051 Score=60.20 Aligned_cols=58 Identities=12% Similarity=0.086 Sum_probs=43.5
Q ss_pred hhhhHHHHHHHHHHh---cCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCC
Q 008186 330 LEEDVPAAMEYIRAQ---SKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 390 (574)
Q Consensus 330 a~~Dl~a~Id~l~~~---~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~ 390 (574)
...|...+++++++. +|.++++|.|+|||-||..+...+... . ....+.++|+.++..
T Consensus 185 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp-~--~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 185 GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSP-S--SKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGG-G--GTTSBSEEEEES--T
T ss_pred hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecc-c--ccccccccccccccc
Confidence 347888888888874 577778999999999999988877652 1 135689999998743
No 191
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.20 E-value=0.019 Score=54.31 Aligned_cols=99 Identities=26% Similarity=0.441 Sum_probs=67.1
Q ss_pred CCcHHHHHHHHHH-HHcCCcccCCCccccc---cccCCCC-CcEEEEEeCCCCCCCHH---HHHHHHHhCCCCceEEEEE
Q 008186 465 TIPAKLILQLTTA-FREGGLRDRGGKFFYK---DHIHKCN-IPILAIAGDQDLICPPE---AVEETVKLLPEDLVTYKVF 536 (574)
Q Consensus 465 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~l~~I~-vPvLII~Ge~D~vvp~e---~~~~l~~~lp~a~~~l~ii 536 (574)
.++++.+.+-.+. |.+..+. .+.+.+. -+.+.|+ ++.|-|-|+.|.|+.+. .+..|...+|...+..++.
T Consensus 96 Dl~AefyL~Ti~~VFq~~~L~--~G~~~~~Gr~Vdp~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~ 173 (202)
T PF06850_consen 96 DLPAEFYLDTIRRVFQEHLLP--RGTWTVRGRPVDPAAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQ 173 (202)
T ss_pred cCcHHHHHHHHHHHHHhCccc--CCceEECCEEcchHHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhccc
Confidence 4566666555443 3322111 1222222 2455665 68888999999999885 4566667777655555554
Q ss_pred eCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 008186 537 GEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 537 ~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~ 570 (574)
+++||++.+.+..=.++|++.|.+|+.+|
T Consensus 174 -----~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 174 -----PGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred -----CCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 78888888999888999999999999875
No 192
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.87 E-value=0.075 Score=55.64 Aligned_cols=56 Identities=13% Similarity=0.256 Sum_probs=47.1
Q ss_pred hhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCC
Q 008186 330 LEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 390 (574)
Q Consensus 330 a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~ 390 (574)
+..|.+.+|.+++..++....+++++|-|.||+++..+=.+| |.-+.+.+.-+.|+
T Consensus 147 ALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKY-----PHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 147 ALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKY-----PHIVLGALAASAPV 202 (492)
T ss_pred HHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcC-----hhhhhhhhhccCce
Confidence 458999999999998777777999999999999999998888 88887776655443
No 193
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=94.75 E-value=0.16 Score=53.44 Aligned_cols=60 Identities=15% Similarity=0.270 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 393 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~ 393 (574)
.++.+..+++.+..|.. .++|+|-|.||.+++.++...........-+++|+|+|-+...
T Consensus 179 ~qlv~~Y~~Lv~~~G~~--nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 179 RQLVATYDYLVESEGNK--NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHHHHHHhccCCC--eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 67777888887555554 8999999999999999877533212223457899999976554
No 194
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=94.51 E-value=0.052 Score=53.37 Aligned_cols=38 Identities=24% Similarity=0.292 Sum_probs=28.4
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 371 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~ 371 (574)
.++...+..++.+++. .++++.||||||.+|..++...
T Consensus 112 ~~~~~~~~~~~~~~p~--~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 112 NQVLPELKSALKQYPD--YKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHHHHHHHHHHhhCCC--ceEEEEccCHHHHHHHHHHHHH
Confidence 5556666666555432 3899999999999999988764
No 195
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=94.10 E-value=0.095 Score=51.53 Aligned_cols=55 Identities=24% Similarity=0.354 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 390 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~ 390 (574)
....+.++.+...++ +++.+.|||.||.+|..++..+... ..++|.+++...+|.
T Consensus 69 ~~A~~yl~~~~~~~~---~~i~v~GHSkGGnLA~yaa~~~~~~-~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 69 KSALAYLKKIAKKYP---GKIYVTGHSKGGNLAQYAAANCDDE-IQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHHhCC---CCEEEEEechhhHHHHHHHHHccHH-HhhheeEEEEeeCCC
Confidence 344445555544433 2799999999999999998874211 145788888887764
No 196
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=93.68 E-value=0.1 Score=51.97 Aligned_cols=57 Identities=21% Similarity=0.368 Sum_probs=42.3
Q ss_pred chhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 328 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 328 ~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
+++.+++.-+|+. .+..+.++..++|||+||.+++.....+ |+.+...++++|..-+
T Consensus 118 ~fL~~~lkP~Ie~---~y~~~~~~~~i~GhSlGGLfvl~aLL~~-----p~~F~~y~~~SPSlWw 174 (264)
T COG2819 118 EFLTEQLKPFIEA---RYRTNSERTAIIGHSLGGLFVLFALLTY-----PDCFGRYGLISPSLWW 174 (264)
T ss_pred HHHHHhhHHHHhc---ccccCcccceeeeecchhHHHHHHHhcC-----cchhceeeeecchhhh
Confidence 3444555555554 3444445799999999999999999885 8899999999987543
No 197
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=93.07 E-value=1.6 Score=42.46 Aligned_cols=33 Identities=12% Similarity=0.177 Sum_probs=25.5
Q ss_pred cEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCC
Q 008186 351 KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 390 (574)
Q Consensus 351 ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~ 390 (574)
.++|||+|||-.+|..+... ..+...|.|++..
T Consensus 58 ~i~lvAWSmGVw~A~~~l~~-------~~~~~aiAINGT~ 90 (213)
T PF04301_consen 58 EIYLVAWSMGVWAANRVLQG-------IPFKRAIAINGTP 90 (213)
T ss_pred eEEEEEEeHHHHHHHHHhcc-------CCcceeEEEECCC
Confidence 89999999999998887654 2467777777654
No 198
>PLN02408 phospholipase A1
Probab=92.73 E-value=0.18 Score=52.86 Aligned_cols=41 Identities=20% Similarity=0.152 Sum_probs=30.0
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 371 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~ 371 (574)
.+++.+.|..+.++++....++++.|||+||++|..+|...
T Consensus 181 r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 181 QEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 35566666666666554333699999999999999988764
No 199
>PLN02454 triacylglycerol lipase
Probab=92.58 E-value=0.2 Score=53.30 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=31.2
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHh
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 370 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~ 370 (574)
.+++...|..+.++++....++++.||||||++|+.+|..
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 4677777887777765432249999999999999999865
No 200
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=92.43 E-value=0.28 Score=46.29 Aligned_cols=54 Identities=20% Similarity=0.282 Sum_probs=43.5
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCC
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 390 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~ 390 (574)
..+|..+++.|+...+ +...+.++|||+|+.++-..+... ...+..+|+++++.
T Consensus 91 a~~L~~f~~gl~a~~~-~~~~~tv~GHSYGS~v~G~A~~~~-----~~~vddvv~~GSPG 144 (177)
T PF06259_consen 91 APRLARFLDGLRATHG-PDAHLTVVGHSYGSTVVGLAAQQG-----GLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHhhhhcC-CCCCEEEEEecchhHHHHHHhhhC-----CCCcccEEEECCCC
Confidence 4888899999988762 334899999999999999888763 55788899998765
No 201
>PLN02571 triacylglycerol lipase
Probab=91.63 E-value=0.28 Score=52.27 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=27.6
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 370 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~ 370 (574)
+++.+.|..+..+++....++++.||||||++|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 555555555555543322369999999999999998876
No 202
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=91.60 E-value=0.34 Score=50.77 Aligned_cols=38 Identities=24% Similarity=0.351 Sum_probs=32.3
Q ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHh
Q 008186 331 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 370 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~ 370 (574)
..|+..+|++.+.+.+.. ++.|||+|+|+=+.-..-.+
T Consensus 309 a~Dl~r~i~~y~~~w~~~--~~~liGySfGADvlP~~~n~ 346 (456)
T COG3946 309 AADLSRLIRFYARRWGAK--RVLLIGYSFGADVLPFAYNR 346 (456)
T ss_pred HHHHHHHHHHHHHhhCcc--eEEEEeecccchhhHHHHHh
Confidence 499999999999987766 99999999999887665554
No 203
>PLN02162 triacylglycerol lipase
Probab=91.37 E-value=0.42 Score=51.40 Aligned_cols=35 Identities=26% Similarity=0.356 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHH
Q 008186 333 DVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLS 369 (574)
Q Consensus 333 Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~ 369 (574)
.+.+.+..+..+++ ..++++.|||+||++|..++.
T Consensus 263 ~I~~~L~~lL~k~p--~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNK--NLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCC--CceEEEEecChHHHHHHHHHH
Confidence 34444444444433 238999999999999998765
No 204
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=90.76 E-value=0.64 Score=44.00 Aligned_cols=58 Identities=22% Similarity=0.310 Sum_probs=38.4
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCC-CCchhhcceeEEccCCC
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFE-GRESRLAAIVTLASSLD 391 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~-~~p~~v~~lVlLap~~~ 391 (574)
.++...|+....+-+ ..+++|+|+|+|+.++..++...+.. ...++|.++|+++.+..
T Consensus 65 ~~~~~~i~~~~~~CP--~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 65 ANLVRLIEEYAARCP--NTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHhCC--CCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 555555555555533 34899999999999999998761110 01467888888886643
No 205
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.40 E-value=0.41 Score=47.51 Aligned_cols=59 Identities=15% Similarity=0.143 Sum_probs=44.1
Q ss_pred ecCCCceEEEEEeCCCCCCCCCCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCC
Q 008186 87 VANCDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGA 152 (574)
Q Consensus 87 ~~~~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~ 152 (574)
++..+-.+..+...|....+ .+.||++|++.+-.... ..++++|+++||.|+++|+-+.
T Consensus 7 ~~~~~~~~~~~~a~P~~~~~--~P~VIv~hei~Gl~~~i-----~~~a~rlA~~Gy~v~~Pdl~~~ 65 (236)
T COG0412 7 IPAPDGELPAYLARPAGAGG--FPGVIVLHEIFGLNPHI-----RDVARRLAKAGYVVLAPDLYGR 65 (236)
T ss_pred eeCCCceEeEEEecCCcCCC--CCEEEEEecccCCchHH-----HHHHHHHHhCCcEEEechhhcc
Confidence 33345778888888886433 24599999977654433 5789999999999999999873
No 206
>PLN02324 triacylglycerol lipase
Probab=90.38 E-value=0.42 Score=50.83 Aligned_cols=39 Identities=18% Similarity=0.278 Sum_probs=28.8
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 370 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~ 370 (574)
+.+.+.|..+..+++....++++.|||+||++|+..|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 556666666666654332369999999999999998865
No 207
>PLN02802 triacylglycerol lipase
Probab=89.67 E-value=0.5 Score=51.34 Aligned_cols=40 Identities=20% Similarity=0.290 Sum_probs=28.2
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 371 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~ 371 (574)
+++.+-|..+..+++....++++.|||+||+++...|...
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 4555555555555543323799999999999999988763
No 208
>PLN00413 triacylglycerol lipase
Probab=89.12 E-value=0.63 Score=50.22 Aligned_cols=36 Identities=25% Similarity=0.372 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHh
Q 008186 333 DVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 370 (574)
Q Consensus 333 Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~ 370 (574)
.+...+..+..+++. .++++.|||+||++|..++..
T Consensus 269 ~i~~~Lk~ll~~~p~--~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 269 TILRHLKEIFDQNPT--SKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred HHHHHHHHHHHHCCC--CeEEEEecCHHHHHHHHHHHH
Confidence 445555555555443 389999999999999988753
No 209
>PLN02761 lipase class 3 family protein
Probab=88.81 E-value=0.65 Score=50.66 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=28.7
Q ss_pred hhHHHHHHHHHHhcC----CCCCcEEEEEeChhHHHHHHHHHh
Q 008186 332 EDVPAAMEYIRAQSK----PKDGKLLAIGHSMGGILLYAMLSR 370 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g----~~~~ki~LVGHSmGG~ial~~A~~ 370 (574)
+++.+.|..+...++ .+..++++.|||+||++|...|..
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 566666666666652 122379999999999999988864
No 210
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=88.23 E-value=4.5 Score=43.18 Aligned_cols=61 Identities=26% Similarity=0.318 Sum_probs=42.0
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHhCCCC------------------------ceEEEEEeCCCCCCCCcccccccccc
Q 008186 500 NIPILAIAGDQDLICPPEAVEETVKLLPED------------------------LVTYKVFGEPSGPHYAHYDLVGGRMA 555 (574)
Q Consensus 500 ~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a------------------------~~~l~ii~~~~~~h~gH~d~l~~~~~ 555 (574)
.++|||.+|+.|.+||.-..+.+.+.+.-. +.++..+ .+++|....| .
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V--~~AGHmvP~d------q 401 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTV--RGAGHMVPQD------Q 401 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEE--TT--SSHHHH------S
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEE--cCCcccChhh------C
Confidence 389999999999999999988888876311 1234444 4555555554 8
Q ss_pred hhhHHHHHHHHHh
Q 008186 556 VEQVYPCIVQFLG 568 (574)
Q Consensus 556 pe~v~~~Il~FL~ 568 (574)
|+.....+.+||+
T Consensus 402 P~~a~~m~~~fl~ 414 (415)
T PF00450_consen 402 PEAALQMFRRFLK 414 (415)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999986
No 211
>PLN02934 triacylglycerol lipase
Probab=88.14 E-value=0.73 Score=50.12 Aligned_cols=37 Identities=24% Similarity=0.389 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 370 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~ 370 (574)
..+...++.+.++++. .++++.|||+||++|..++..
T Consensus 305 ~~v~~~lk~ll~~~p~--~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 305 YAVRSKLKSLLKEHKN--AKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHHCCC--CeEEEeccccHHHHHHHHHHH
Confidence 4466666666666543 389999999999999998754
No 212
>PLN02753 triacylglycerol lipase
Probab=88.02 E-value=0.78 Score=50.09 Aligned_cols=39 Identities=21% Similarity=0.301 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHhcCC---CCCcEEEEEeChhHHHHHHHHHh
Q 008186 332 EDVPAAMEYIRAQSKP---KDGKLLAIGHSMGGILLYAMLSR 370 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~---~~~ki~LVGHSmGG~ial~~A~~ 370 (574)
+++.+.|..+..+++. +..++++.|||+||++|+..|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 5666666666665532 13489999999999999998865
No 213
>PLN02310 triacylglycerol lipase
Probab=87.91 E-value=0.78 Score=48.78 Aligned_cols=39 Identities=23% Similarity=0.284 Sum_probs=25.5
Q ss_pred hhHHHHHHHHHHhcC--CCCCcEEEEEeChhHHHHHHHHHh
Q 008186 332 EDVPAAMEYIRAQSK--PKDGKLLAIGHSMGGILLYAMLSR 370 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g--~~~~ki~LVGHSmGG~ial~~A~~ 370 (574)
+.+.+.|..+...++ .+..++++.|||+||++|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 334444444444332 112379999999999999988865
No 214
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.82 E-value=8.2 Score=40.42 Aligned_cols=67 Identities=21% Similarity=0.192 Sum_probs=50.4
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhhc
Q 008186 500 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 571 (574)
Q Consensus 500 ~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~~ 571 (574)
..+.+.+.+..|.++|.+..+++..........+..+...+..|..|+- ..|..+.+...+|+....
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r-----~~p~~y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFR-----SFPKTYLKKCSEFLRSVI 291 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeec-----cCcHHHHHHHHHHHHhcc
Confidence 4678888999999999999888866554433344444346777888865 478999999999998764
No 215
>PLN02719 triacylglycerol lipase
Probab=87.29 E-value=0.89 Score=49.50 Aligned_cols=39 Identities=21% Similarity=0.276 Sum_probs=28.9
Q ss_pred hhHHHHHHHHHHhcCC---CCCcEEEEEeChhHHHHHHHHHh
Q 008186 332 EDVPAAMEYIRAQSKP---KDGKLLAIGHSMGGILLYAMLSR 370 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~---~~~ki~LVGHSmGG~ial~~A~~ 370 (574)
+++.+.|..+..+++. +..++++.|||+||++|...|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 5566666666666542 22379999999999999998865
No 216
>PLN03037 lipase class 3 family protein; Provisional
Probab=85.76 E-value=1.2 Score=48.64 Aligned_cols=20 Identities=35% Similarity=0.469 Sum_probs=18.3
Q ss_pred cEEEEEeChhHHHHHHHHHh
Q 008186 351 KLLAIGHSMGGILLYAMLSR 370 (574)
Q Consensus 351 ki~LVGHSmGG~ial~~A~~ 370 (574)
++++.|||+||++|+..|..
T Consensus 319 SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 319 SLTITGHSLGGALALLNAYE 338 (525)
T ss_pred eEEEeccCHHHHHHHHHHHH
Confidence 79999999999999998865
No 217
>PLN02847 triacylglycerol lipase
Probab=85.63 E-value=1.2 Score=49.25 Aligned_cols=37 Identities=19% Similarity=0.130 Sum_probs=25.6
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 370 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~ 370 (574)
..+...|..+...++ .-+++++|||+||.+|..++..
T Consensus 235 ~~i~~~L~kal~~~P--dYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 235 KLSTPCLLKALDEYP--DFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHHCC--CCeEEEeccChHHHHHHHHHHH
Confidence 444444444444433 2389999999999999988765
No 218
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=85.56 E-value=1.7 Score=45.40 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=32.5
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 348 KDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 348 ~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
..+|+.|||||+|+.+.+..+...........|..+++++.+...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 344899999999999998877653222223447889999887654
No 219
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.23 E-value=7.7 Score=37.46 Aligned_cols=39 Identities=23% Similarity=0.367 Sum_probs=28.6
Q ss_pred CCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCC
Q 008186 349 DGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 390 (574)
Q Consensus 349 ~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~ 390 (574)
...+++|.||.||...+.+..+++. .++|.++.+-.+++
T Consensus 189 ~~sv~vvahsyGG~~t~~l~~~f~~---d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 189 AESVFVVAHSYGGSLTLDLVERFPD---DESVFAIALTDSAM 227 (297)
T ss_pred cceEEEEEeccCChhHHHHHHhcCC---ccceEEEEeecccc
Confidence 3489999999999999999999632 34555555555543
No 220
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=85.14 E-value=4.1 Score=42.41 Aligned_cols=63 Identities=16% Similarity=0.276 Sum_probs=48.3
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhCCCCceEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 008186 496 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 570 (574)
Q Consensus 496 l~~I~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a~~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~~ 570 (574)
..++.+|-.|+.|..|...+++.+.-++..+|+. +-+.++ ++..|.. .++.+-+.+..|+++.
T Consensus 325 ~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~-kaLrmv-----PN~~H~~------~n~~i~esl~~flnrf 387 (507)
T COG4287 325 QLRLALPKYIVNASGDDFFVPDSANLYYDDLPGE-KALRMV-----PNDPHNL------INQFIKESLEPFLNRF 387 (507)
T ss_pred hhhccccceeecccCCcccCCCccceeeccCCCc-eeeeeC-----CCCcchh------hHHHHHHHHHHHHHHH
Confidence 3577889999999999999999999999999984 455555 7777865 4455666666676654
No 221
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=84.49 E-value=0.8 Score=44.38 Aligned_cols=51 Identities=10% Similarity=0.113 Sum_probs=31.8
Q ss_pred EEEeCCCCCCCCCCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCc
Q 008186 96 LWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAG 153 (574)
Q Consensus 96 ~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G 153 (574)
.|.+.|... ...+.||++|++.+-... .+.+|..|+++||.|+++|+-+-.
T Consensus 3 ay~~~P~~~--~~~~~Vvv~~d~~G~~~~-----~~~~ad~lA~~Gy~v~~pD~f~~~ 53 (218)
T PF01738_consen 3 AYVARPEGG--GPRPAVVVIHDIFGLNPN-----IRDLADRLAEEGYVVLAPDLFGGR 53 (218)
T ss_dssp EEEEEETTS--SSEEEEEEE-BTTBS-HH-----HHHHHHHHHHTT-EEEEE-CCCCT
T ss_pred EEEEeCCCC--CCCCEEEEEcCCCCCchH-----HHHHHHHHHhcCCCEEecccccCC
Confidence 455566643 124459999997654322 135899999999999999986544
No 222
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=83.09 E-value=1.5 Score=43.93 Aligned_cols=42 Identities=21% Similarity=0.344 Sum_probs=32.7
Q ss_pred cchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 008186 327 DHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 371 (574)
Q Consensus 327 ~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~ 371 (574)
+.|. .+..+++..+++.++.. ++.|-|||+||++|..+..++
T Consensus 256 dryy-Sa~ldI~~~v~~~Ypda--~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 256 DRYY-SAALDILGAVRRIYPDA--RIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred cchh-HHHHHHHHHHHHhCCCc--eEEEeccccchHHHHHhcccc
Confidence 3443 56667777777776544 899999999999999888876
No 223
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=83.09 E-value=1.5 Score=43.93 Aligned_cols=42 Identities=21% Similarity=0.344 Sum_probs=32.7
Q ss_pred cchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 008186 327 DHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 371 (574)
Q Consensus 327 ~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~ 371 (574)
+.|. .+..+++..+++.++.. ++.|-|||+||++|..+..++
T Consensus 256 dryy-Sa~ldI~~~v~~~Ypda--~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 256 DRYY-SAALDILGAVRRIYPDA--RIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred cchh-HHHHHHHHHHHHhCCCc--eEEEeccccchHHHHHhcccc
Confidence 3443 56667777777776544 899999999999999888876
No 224
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=78.58 E-value=31 Score=38.50 Aligned_cols=56 Identities=11% Similarity=0.140 Sum_probs=38.5
Q ss_pred hhhHHHHHHHHHHh---cCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccC
Q 008186 331 EEDVPAAMEYIRAQ---SKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 389 (574)
Q Consensus 331 ~~Dl~a~Id~l~~~---~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~ 389 (574)
..|...++++++.. .|.++.++.++|||.||..+..+..-.. ....+.+.|.+++.
T Consensus 173 l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~---s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 173 LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPH---SRGLFHKAISMSGN 231 (545)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHh---hHHHHHHHHhhccc
Confidence 35777777777663 4667779999999999999987765310 02356666666654
No 225
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=78.29 E-value=6.7 Score=38.60 Aligned_cols=67 Identities=21% Similarity=0.278 Sum_probs=42.4
Q ss_pred CCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCc-hhhcceeEEccCCC
Q 008186 324 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRE-SRLAAIVTLASSLD 391 (574)
Q Consensus 324 ~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p-~~v~~lVlLap~~~ 391 (574)
.++++-..+-+..+.+.++.... .+++++++|+|+|+.++...+.+....+.+ ...-.+|+++-+..
T Consensus 23 ~t~~~Sv~~G~~~L~~ai~~~~~-~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP~r 90 (225)
T PF08237_consen 23 PTYDESVAEGVANLDAAIRAAIA-AGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNPRR 90 (225)
T ss_pred CccchHHHHHHHHHHHHHHhhcc-CCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCCCC
Confidence 45555554555666666665332 345899999999999999988775332211 13445778776543
No 226
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=77.57 E-value=3.3 Score=42.09 Aligned_cols=55 Identities=16% Similarity=0.292 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhcCC--CCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCC
Q 008186 334 VPAAMEYIRAQSKP--KDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 393 (574)
Q Consensus 334 l~a~Id~l~~~~g~--~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~ 393 (574)
..+++=+++..++. ..+.-+|+|.|+||.+++..+..| |+.+..++..+|.....
T Consensus 159 ~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~-----Pe~FG~V~s~Sps~~~~ 215 (299)
T COG2382 159 AQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRH-----PERFGHVLSQSGSFWWT 215 (299)
T ss_pred HHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcC-----chhhceeeccCCccccC
Confidence 34455566665542 233579999999999999999998 99999999888876544
No 227
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=74.20 E-value=24 Score=38.35 Aligned_cols=62 Identities=15% Similarity=0.209 Sum_probs=43.9
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHhCCCC-----------------------ceEEEEEeCCCCCCCCcccccccccch
Q 008186 500 NIPILAIAGDQDLICPPEAVEETVKLLPED-----------------------LVTYKVFGEPSGPHYAHYDLVGGRMAV 556 (574)
Q Consensus 500 ~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a-----------------------~~~l~ii~~~~~~h~gH~d~l~~~~~p 556 (574)
.++|||..|+.|.+||.-..+.+.+.+.-. ..+++.+ .+.||+- . .+|
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V-----~~AGHmV---p-~qP 417 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATI-----KAGGHTA---E-YRP 417 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEE-----cCCCCCC---C-CCH
Confidence 479999999999999998888888776310 0122333 3455532 1 379
Q ss_pred hhHHHHHHHHHhhh
Q 008186 557 EQVYPCIVQFLGRY 570 (574)
Q Consensus 557 e~v~~~Il~FL~~~ 570 (574)
+.....+..|+...
T Consensus 418 ~~al~m~~~Fi~~~ 431 (433)
T PLN03016 418 NETFIMFQRWISGQ 431 (433)
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999754
No 228
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=73.96 E-value=4.5 Score=42.34 Aligned_cols=37 Identities=19% Similarity=0.243 Sum_probs=26.4
Q ss_pred hhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHh
Q 008186 332 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 370 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~ 370 (574)
..+.+.++.+...++ .-++.+-|||+||++|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~--~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP--NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcC--CcEEEEecCChHHHHHHHHHHH
Confidence 344555555555443 2289999999999999988875
No 229
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=72.01 E-value=6.1 Score=43.67 Aligned_cols=61 Identities=23% Similarity=0.321 Sum_probs=35.9
Q ss_pred cccchhHHhhcccceeccCCCccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHh
Q 008186 305 LFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 370 (574)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~d~s~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~ 370 (574)
|..+..+|+.....-. .....+ .-...+++.++..--.++.+++.|||||||.++=.++..
T Consensus 486 Y~Tsit~w~~~~p~e~----~r~sl~-~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLld 546 (697)
T KOG2029|consen 486 YTTSITDWRARCPAEA----HRRSLA-ARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLD 546 (697)
T ss_pred cccchhhhcccCcccc----hhhHHH-HHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHH
Confidence 5666777776221110 111222 334466666655422235689999999999888777654
No 230
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=70.60 E-value=76 Score=34.72 Aligned_cols=44 Identities=18% Similarity=0.159 Sum_probs=36.9
Q ss_pred cchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 008186 327 DHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 371 (574)
Q Consensus 327 ~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~ 371 (574)
++| ++-+..+|+.....+|.+...++|-|-|||..-|+.|+++.
T Consensus 335 ~ey-E~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 335 DEY-EQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred HHH-HHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 455 47788888887788887777899999999999999999874
No 231
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=66.95 E-value=3 Score=44.04 Aligned_cols=17 Identities=35% Similarity=0.671 Sum_probs=14.5
Q ss_pred cEEEEEeChhHHHHHHH
Q 008186 351 KLLAIGHSMGGILLYAM 367 (574)
Q Consensus 351 ki~LVGHSmGG~ial~~ 367 (574)
++..||||+||.++-.+
T Consensus 151 kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 151 KISFVGHSLGGLVARYA 167 (405)
T ss_pred eeeeeeeecCCeeeeEE
Confidence 89999999999877544
No 232
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=65.66 E-value=7.3 Score=33.84 Aligned_cols=32 Identities=19% Similarity=0.210 Sum_probs=17.5
Q ss_pred CCceEEEEEeCCCCCCCCCCCcEEEecccccCcee
Q 008186 90 CDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIG 124 (574)
Q Consensus 90 ~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~ 124 (574)
+|..++..+..+.. +...||||+||+.++-.-
T Consensus 76 ~g~~iHFih~rs~~---~~aiPLll~HGWPgSf~E 107 (112)
T PF06441_consen 76 DGLDIHFIHVRSKR---PNAIPLLLLHGWPGSFLE 107 (112)
T ss_dssp TTEEEEEEEE--S----TT-EEEEEE--SS--GGG
T ss_pred eeEEEEEEEeeCCC---CCCeEEEEECCCCccHHh
Confidence 58888877776643 245789999999986543
No 233
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=58.65 E-value=69 Score=35.10 Aligned_cols=61 Identities=18% Similarity=0.085 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHHhc---CCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCC
Q 008186 332 EDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS 394 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~---g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~ 394 (574)
.|+..+.+.+...+ .....+.+|+|-|.||.-+..+|..-... ....+++|.+.+......
T Consensus 177 ~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~--~~~~~~~~nlssvligng 240 (498)
T COG2939 177 KDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLED--NIALNGNVNLSSVLIGNG 240 (498)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHh--ccccCCceEeeeeeecCC
Confidence 56666665554432 11123799999999999888887653100 123677787776555444
No 234
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=57.19 E-value=12 Score=41.27 Aligned_cols=47 Identities=19% Similarity=0.135 Sum_probs=40.6
Q ss_pred HHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCC
Q 008186 342 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 393 (574)
Q Consensus 342 ~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~ 393 (574)
+..|+.++..-+..|-|.||..++..|.+| |+.+.++|.-+|...+.
T Consensus 107 ~~~Yg~~p~~sY~~GcS~GGRqgl~~AQry-----P~dfDGIlAgaPA~~~~ 153 (474)
T PF07519_consen 107 EAFYGKAPKYSYFSGCSTGGRQGLMAAQRY-----PEDFDGILAGAPAINWT 153 (474)
T ss_pred HHHhCCCCCceEEEEeCCCcchHHHHHHhC-----hhhcCeEEeCCchHHHH
Confidence 345677777899999999999999999998 99999999999876653
No 235
>PLN02209 serine carboxypeptidase
Probab=57.12 E-value=93 Score=33.87 Aligned_cols=62 Identities=18% Similarity=0.196 Sum_probs=44.0
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHhCCCC----------------------c-eEEEEEeCCCCCCCCcccccccccch
Q 008186 500 NIPILAIAGDQDLICPPEAVEETVKLLPED----------------------L-VTYKVFGEPSGPHYAHYDLVGGRMAV 556 (574)
Q Consensus 500 ~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a----------------------~-~~l~ii~~~~~~h~gH~d~l~~~~~p 556 (574)
.++|||..|+.|.+|+.-..+.+.+.+.-. + .+++.+ .+.||+- . .+|
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V-----~~AGHmV---p-~qP 421 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATV-----KGGGHTA---E-YLP 421 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEE-----cCCCCCc---C-cCH
Confidence 479999999999999998888888776410 0 122222 4456632 1 389
Q ss_pred hhHHHHHHHHHhhh
Q 008186 557 EQVYPCIVQFLGRY 570 (574)
Q Consensus 557 e~v~~~Il~FL~~~ 570 (574)
+.....+.+|+...
T Consensus 422 ~~al~m~~~fi~~~ 435 (437)
T PLN02209 422 EESSIMFQRWISGQ 435 (437)
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999653
No 236
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=55.25 E-value=19 Score=39.19 Aligned_cols=46 Identities=9% Similarity=0.251 Sum_probs=32.9
Q ss_pred CCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCCCC
Q 008186 349 DGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS 394 (574)
Q Consensus 349 ~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~~~ 394 (574)
.+|+.|||+|+|+-+.+..+......+.-.-|..+++++.|+....
T Consensus 446 ~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~ 491 (633)
T KOG2385|consen 446 NRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKA 491 (633)
T ss_pred CCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCH
Confidence 3599999999999998866553222222456788999998876543
No 237
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=54.62 E-value=22 Score=37.87 Aligned_cols=61 Identities=20% Similarity=0.130 Sum_probs=38.2
Q ss_pred hhHHHHHHHHHHhcC-CCCCcEEEEEeChhHHHHHHHHHhcCC-CC----CchhhcceeEEccCCCC
Q 008186 332 EDVPAAMEYIRAQSK-PKDGKLLAIGHSMGGILLYAMLSRCGF-EG----RESRLAAIVTLASSLDY 392 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g-~~~~ki~LVGHSmGG~ial~~A~~~~~-~~----~p~~v~~lVlLap~~~~ 392 (574)
+|+..+|...-.+++ ....+++|.|-|.||..+-.+|..--. .. ..-.++++++.++.+++
T Consensus 117 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 117 EDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 777777776655443 223389999999999987766653100 00 02347888888777654
No 238
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=46.20 E-value=30 Score=36.95 Aligned_cols=58 Identities=14% Similarity=0.096 Sum_probs=47.4
Q ss_pred ccchhhhhHHHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCCC
Q 008186 326 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 392 (574)
Q Consensus 326 ~~~~a~~Dl~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~~ 392 (574)
+.+-+ .|...+++.++..++. +++--|-|-||+.++.+=.-| |..|.+.|.-..+.+.
T Consensus 114 i~QAA-~D~Hri~~A~K~iY~~---kWISTG~SKGGmTa~y~rrFy-----P~DVD~tVaYVAP~~~ 171 (448)
T PF05576_consen 114 IWQAA-SDQHRIVQAFKPIYPG---KWISTGGSKGGMTAVYYRRFY-----PDDVDGTVAYVAPNDV 171 (448)
T ss_pred HhHhh-HHHHHHHHHHHhhccC---CceecCcCCCceeEEEEeeeC-----CCCCCeeeeeeccccc
Confidence 33434 9999999999988754 899999999999998887666 8899999987766553
No 239
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=43.73 E-value=67 Score=33.28 Aligned_cols=62 Identities=15% Similarity=0.209 Sum_probs=43.6
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHhCCCC-----------------------ceEEEEEeCCCCCCCCcccccccccch
Q 008186 500 NIPILAIAGDQDLICPPEAVEETVKLLPED-----------------------LVTYKVFGEPSGPHYAHYDLVGGRMAV 556 (574)
Q Consensus 500 ~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a-----------------------~~~l~ii~~~~~~h~gH~d~l~~~~~p 556 (574)
.++|||..|+.|.+|+.-..+.+.+.+.-. ..++..+ .+.||+- . ..|
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V-----~~AGHmV---~-~qP 303 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATI-----KAGGHTA---E-YRP 303 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEE-----cCCCCCC---C-cCH
Confidence 479999999999999998888888776410 0122222 2455532 1 379
Q ss_pred hhHHHHHHHHHhhh
Q 008186 557 EQVYPCIVQFLGRY 570 (574)
Q Consensus 557 e~v~~~Il~FL~~~ 570 (574)
+.....+..||...
T Consensus 304 ~~al~m~~~fi~~~ 317 (319)
T PLN02213 304 NETFIMFQRWISGQ 317 (319)
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999753
No 240
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=42.20 E-value=57 Score=39.48 Aligned_cols=52 Identities=23% Similarity=0.254 Sum_probs=36.4
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 335 PAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 335 ~a~Id~l~~~~g~~~~ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
.-.|+.+++-. +.+|..++|+|+|+.++..+|..... ......+|++.+...
T Consensus 2169 ~~yirqirkvQ--P~GPYrl~GYSyG~~l~f~ma~~Lqe---~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2169 AYYIRQIRKVQ--PEGPYRLAGYSYGACLAFEMASQLQE---QQSPAPLILLDGSPT 2220 (2376)
T ss_pred HHHHHHHHhcC--CCCCeeeeccchhHHHHHHHHHHHHh---hcCCCcEEEecCchH
Confidence 34566676653 33499999999999999999886422 234556888876543
No 241
>PF07167 PhaC_N: Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus; InterPro: IPR010941 This entry represents the central domain of the bacterial poly-beta-hydroxybutyrate polymerase (PhaC). Polyhydroxyalkanoic acids (PHAs) are carbon and energy reserve polymers produced in some bacteria when carbon sources are plentiful and another nutrient, such as nitrogen, phosphate, oxygen, or sulphur, becomes limiting. PHAs composed of monomeric units ranging from 3 to 14 carbons exist in nature. When the carbon source is exhausted, PHA is utilised by the bacterium. PhaC links D-(-)-3-hydroxybutyrl-CoA to an existing PHA molecule by the formation of an ester bond [].; GO: 0016746 transferase activity, transferring acyl groups, 0042619 poly-hydroxybutyrate biosynthetic process
Probab=40.59 E-value=30 Score=32.39 Aligned_cols=45 Identities=29% Similarity=0.437 Sum_probs=36.2
Q ss_pred ceEEEEEeCCCCCCCCCCCcEEEecccccCceeeecCCCCcHHHHh
Q 008186 92 WRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYM 137 (574)
Q Consensus 92 ~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~~~~l 137 (574)
-.+.+.+|.|....- ...|||++.-+-.--...|++|..|+.+||
T Consensus 128 ~l~eLiqY~P~T~~v-~~~PlLIvPp~InKyYIlDL~p~~SlVr~l 172 (172)
T PF07167_consen 128 DLMELIQYAPTTEKV-HARPLLIVPPWINKYYILDLSPENSLVRYL 172 (172)
T ss_pred CceEEEeecCCCCCc-cceeEEeecchhchhheeecCCCcchhhcC
Confidence 357788999885432 567899999988877788999999999875
No 242
>PLN02209 serine carboxypeptidase
Probab=39.25 E-value=80 Score=34.37 Aligned_cols=61 Identities=10% Similarity=0.105 Sum_probs=34.8
Q ss_pred hhHHHHHHHHHHhcC-CCCCcEEEEEeChhHHHHHHHHHhcCC-C----CCchhhcceeEEccCCCC
Q 008186 332 EDVPAAMEYIRAQSK-PKDGKLLAIGHSMGGILLYAMLSRCGF-E----GRESRLAAIVTLASSLDY 392 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g-~~~~ki~LVGHSmGG~ial~~A~~~~~-~----~~p~~v~~lVlLap~~~~ 392 (574)
+|+.+++...-++.+ ....++++.|.|.||.-+-.+|..--. . ...-.++++++.++..+.
T Consensus 148 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 148 KKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred HHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 555555555444332 122389999999999877666653200 0 002246677777765543
No 243
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=38.56 E-value=86 Score=34.07 Aligned_cols=60 Identities=10% Similarity=0.101 Sum_probs=33.7
Q ss_pred hhHHHHHHHHHHhcCC-CCCcEEEEEeChhHHHHHHHHHhcCC-C----CCchhhcceeEEccCCC
Q 008186 332 EDVPAAMEYIRAQSKP-KDGKLLAIGHSMGGILLYAMLSRCGF-E----GRESRLAAIVTLASSLD 391 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g~-~~~ki~LVGHSmGG~ial~~A~~~~~-~----~~p~~v~~lVlLap~~~ 391 (574)
+|+..++...-++.+. ...++++.|.|.||..+-.+|..--. . ..+-.++++++-++..+
T Consensus 146 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~ 211 (433)
T PLN03016 146 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTY 211 (433)
T ss_pred HHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcC
Confidence 4455555544333221 23489999999999977766654200 0 01235677777666443
No 244
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=36.11 E-value=1.1e+02 Score=31.71 Aligned_cols=60 Identities=10% Similarity=0.084 Sum_probs=33.1
Q ss_pred hhHHHHHHHHHHhcC-CCCCcEEEEEeChhHHHHHHHHHhcCC-C----CCchhhcceeEEccCCC
Q 008186 332 EDVPAAMEYIRAQSK-PKDGKLLAIGHSMGGILLYAMLSRCGF-E----GRESRLAAIVTLASSLD 391 (574)
Q Consensus 332 ~Dl~a~Id~l~~~~g-~~~~ki~LVGHSmGG~ial~~A~~~~~-~----~~p~~v~~lVlLap~~~ 391 (574)
+|+..++...-.+++ ....++++.|-|.||..+-.+|..--. . ..+-.++++++-++..+
T Consensus 32 ~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~ 97 (319)
T PLN02213 32 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTY 97 (319)
T ss_pred HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCC
Confidence 455555544433332 123489999999999977777664200 0 00124566666555443
No 245
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=35.74 E-value=29 Score=34.85 Aligned_cols=37 Identities=22% Similarity=0.297 Sum_probs=29.9
Q ss_pred Cc-EEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccC
Q 008186 110 HP-LLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRG 151 (574)
Q Consensus 110 ~p-~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg 151 (574)
-| |+|+||+.-....|. .+-.|++..||-|+++++-.
T Consensus 46 yPVilF~HG~~l~ns~Ys-----~lL~HIASHGfIVVAPQl~~ 83 (307)
T PF07224_consen 46 YPVILFLHGFNLYNSFYS-----QLLAHIASHGFIVVAPQLYT 83 (307)
T ss_pred ccEEEEeechhhhhHHHH-----HHHHHHhhcCeEEEechhhc
Confidence 45 789999887655553 57899999999999999864
No 246
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=34.77 E-value=1.7e+02 Score=32.08 Aligned_cols=63 Identities=24% Similarity=0.334 Sum_probs=42.1
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHhCCCC-----------------------ceEEEEEeCCCCCCCCcccccccccch
Q 008186 500 NIPILAIAGDQDLICPPEAVEETVKLLPED-----------------------LVTYKVFGEPSGPHYAHYDLVGGRMAV 556 (574)
Q Consensus 500 ~vPvLII~Ge~D~vvp~e~~~~l~~~lp~a-----------------------~~~l~ii~~~~~~h~gH~d~l~~~~~p 556 (574)
..++||..|+.|.+||.-..+.+.+.+.-. +..+..+ .+++|..-.+ .|
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tV--rGaGH~VP~~------~p 434 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATV--RGAGHMVPYD------KP 434 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEE--eCCcccCCCC------Cc
Confidence 379999999999999998777765544210 0121222 3445544443 78
Q ss_pred hhHHHHHHHHHhhh
Q 008186 557 EQVYPCIVQFLGRY 570 (574)
Q Consensus 557 e~v~~~Il~FL~~~ 570 (574)
+.....+..||...
T Consensus 435 ~~al~m~~~fl~g~ 448 (454)
T KOG1282|consen 435 ESALIMFQRFLNGQ 448 (454)
T ss_pred HHHHHHHHHHHcCC
Confidence 88889999999764
No 247
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=31.68 E-value=1e+02 Score=34.44 Aligned_cols=26 Identities=23% Similarity=0.445 Sum_probs=21.1
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHHhc
Q 008186 346 KPKDGKLLAIGHSMGGILLYAMLSRC 371 (574)
Q Consensus 346 g~~~~ki~LVGHSmGG~ial~~A~~~ 371 (574)
|.-.++++++|-|.||.+++..+.++
T Consensus 465 G~TgEriv~aGDSAGgNL~~~VaLr~ 490 (880)
T KOG4388|consen 465 GSTGERIVLAGDSAGGNLCFTVALRA 490 (880)
T ss_pred CcccceEEEeccCCCcceeehhHHHH
Confidence 44456999999999999988887663
No 248
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.70 E-value=46 Score=31.26 Aligned_cols=36 Identities=19% Similarity=0.296 Sum_probs=32.4
Q ss_pred cEEEEEeChhHHHHHHHHHhcCCCCCchhhcceeEEccCCC
Q 008186 351 KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 391 (574)
Q Consensus 351 ki~LVGHSmGG~ial~~A~~~~~~~~p~~v~~lVlLap~~~ 391 (574)
...+-|-||||..+..+..+| |+.+.++|.+++..+
T Consensus 102 s~~~sgcsmGayhA~nfvfrh-----P~lftkvialSGvYd 137 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRH-----PHLFTKVIALSGVYD 137 (227)
T ss_pred CccccccchhhhhhhhhheeC-----hhHhhhheeecceee
Confidence 678899999999999999997 999999999988654
No 249
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=30.11 E-value=82 Score=34.69 Aligned_cols=66 Identities=12% Similarity=0.104 Sum_probs=42.3
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHhC----CCC----c--eEEEEEeCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 008186 500 NIPILAIAGDQDLICPPEAVEETVKLL----PED----L--VTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 569 (574)
Q Consensus 500 ~vPvLII~Ge~D~vvp~e~~~~l~~~l----p~a----~--~~l~ii~~~~~~h~gH~d~l~~~~~pe~v~~~Il~FL~~ 569 (574)
.-++++.||..|.+||+.....+++.+ ++. + .++..+ ++.+|+.--.+ ..+-.+...|.+|+++
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~v-----PGm~HC~gG~g-~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMV-----PGMGHCGGGPG-PDPFDALTALVDWVEN 426 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEec-----CCCcccCCCCC-CCCCCHHHHHHHHHhC
Confidence 468899999999999998766665543 321 1 244444 44555432211 2345688999999986
Q ss_pred hc
Q 008186 570 YD 571 (574)
Q Consensus 570 ~~ 571 (574)
-.
T Consensus 427 G~ 428 (474)
T PF07519_consen 427 GK 428 (474)
T ss_pred CC
Confidence 43
No 250
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=28.54 E-value=52 Score=32.07 Aligned_cols=35 Identities=23% Similarity=0.493 Sum_probs=29.8
Q ss_pred CCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEec
Q 008186 109 NHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEV 149 (574)
Q Consensus 109 ~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 149 (574)
.++.+||-|....+++| .+|+.|++.||.|++---
T Consensus 6 ~~k~VlItgcs~GGIG~------ala~ef~~~G~~V~AtaR 40 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGY------ALAKEFARNGYLVYATAR 40 (289)
T ss_pred CCCeEEEeecCCcchhH------HHHHHHHhCCeEEEEEcc
Confidence 45799999988888888 589999999999998643
No 251
>PRK11460 putative hydrolase; Provisional
Probab=23.86 E-value=80 Score=30.87 Aligned_cols=45 Identities=16% Similarity=0.099 Sum_probs=29.6
Q ss_pred CCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCcc
Q 008186 108 RNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGL 154 (574)
Q Consensus 108 ~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G~ 154 (574)
.+.||+++||-...-..+... ..++..|.+.|.+|-...++|.|-
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~--~~~~~~L~~~g~~~~~~~~~~~gH 191 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHA--VAAQEALISLGGDVTLDIVEDLGH 191 (232)
T ss_pred CCCcEEEEecCCCCccCHHHH--HHHHHHHHHCCCCeEEEEECCCCC
Confidence 467899999966655444332 456777888888766665565443
No 252
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=22.42 E-value=1.3e+02 Score=30.53 Aligned_cols=74 Identities=18% Similarity=0.210 Sum_probs=46.3
Q ss_pred HHHHhhhCCceEEEE------eccCCcccCCCCCchhhhhhcccchhHHHHhhccCCcCCCccccccccccccccchhhh
Q 008186 133 FARYMAGQGFDTWIL------EVRGAGLSVRGSNLKEAQQSAHGVSEQMEAVANNSKISPVKKEDDLTRLATVWDESKLV 206 (574)
Q Consensus 133 ~~~~l~~~g~~v~~~------d~rg~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (574)
-..-|...|++||++ +++|+|...+...+.+ + ...++
T Consensus 20 A~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v~~~e----------~---------------------------l~~~l 62 (281)
T COG2240 20 AIFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIVMPPE----------Q---------------------------LADLL 62 (281)
T ss_pred HHHHHHHcCCceeeeceEEecCCCCCCCCCCcCCCHH----------H---------------------------HHHHH
Confidence 345678889999987 6899998776543321 1 23344
Q ss_pred hHHHH--HHhhhhhhccccccccchhhhhhhHHHHHhhh
Q 008186 207 TKLTE--TFMSLSERLSGFLSENQSKIMSAKLFDQISKL 243 (574)
Q Consensus 207 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
+.|.+ .+....--+|||+-..+....-..++++|.+-
T Consensus 63 ~~l~~~~~~~~~davltGYlgs~~qv~~i~~~v~~vk~~ 101 (281)
T COG2240 63 NGLEAIDKLGECDAVLTGYLGSAEQVRAIAGIVKAVKEA 101 (281)
T ss_pred HHHHhcccccccCEEEEccCCCHHHHHHHHHHHHHHhcc
Confidence 44444 44445555788876666555555666666554
No 253
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=22.30 E-value=48 Score=31.56 Aligned_cols=45 Identities=16% Similarity=0.211 Sum_probs=31.3
Q ss_pred CCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCcc
Q 008186 108 RNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGL 154 (574)
Q Consensus 108 ~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G~ 154 (574)
.++|+|++||-......+. ....+++.|.+.|.++..+-++|.|-
T Consensus 143 ~~~P~li~hG~~D~~Vp~~--~s~~~~~~L~~~g~~~~~~~~p~~gH 187 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPS--QSLRLYNALRKAGKPVELLIFPGEGH 187 (213)
T ss_dssp GGSEEEEEEETTBSSSTTH--HHHHHHHHHHHTTSSEEEEEETT-SS
T ss_pred CCCCEEEEccCCCCccCHH--HHHHHHHHHHhcCCCEEEEEcCcCCC
Confidence 3578999999654433222 12468889999998888888887664
No 254
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=21.82 E-value=49 Score=37.71 Aligned_cols=59 Identities=15% Similarity=0.195 Sum_probs=40.0
Q ss_pred EEEeCCCCCCCCCCCcEEEecccccCceeeecCCCCcHHHHhhhCCceEEEEeccCCcccC
Q 008186 96 LWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSV 156 (574)
Q Consensus 96 ~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~G~S~ 156 (574)
++...|...+...+.|+|||||........+ ....|...|...|..|-.+-+++-|-+-
T Consensus 538 ~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~--q~~~~~~aL~~~g~~~~~~~~p~e~H~~ 596 (620)
T COG1506 538 YEDRSPIFYADNIKTPLLLIHGEEDDRVPIE--QAEQLVDALKRKGKPVELVVFPDEGHGF 596 (620)
T ss_pred HHhcChhhhhcccCCCEEEEeecCCccCChH--HHHHHHHHHHHcCceEEEEEeCCCCcCC
Confidence 4445555555556889999999665443333 2346888899999988888887655443
No 255
>PHA02857 monoglyceride lipase; Provisional
Probab=20.86 E-value=1.4e+02 Score=29.53 Aligned_cols=26 Identities=19% Similarity=0.229 Sum_probs=19.4
Q ss_pred HHHhHHHHHHHHhcCcEEeccccchhhhh
Q 008186 276 IRDLSQNLVNMIEEGQLSVSPQLFDLQER 304 (574)
Q Consensus 276 ~~~~~~~l~~~~~~Gy~vi~pdl~~~~~~ 304 (574)
.+.+++.| ...||+|+++|+.|+|.+
T Consensus 41 ~~~~~~~l---~~~g~~via~D~~G~G~S 66 (276)
T PHA02857 41 YEELAENI---SSLGILVFSHDHIGHGRS 66 (276)
T ss_pred HHHHHHHH---HhCCCEEEEccCCCCCCC
Confidence 33445554 778999999999998664
No 256
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=20.81 E-value=2e+02 Score=31.53 Aligned_cols=41 Identities=22% Similarity=0.347 Sum_probs=27.9
Q ss_pred ccceeeecC-CCceEEEEEeCCCCCCCCCCCcEEEecccccCc
Q 008186 81 ELHYVSVAN-CDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNA 122 (574)
Q Consensus 81 ~~~~~~~~~-~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~ 122 (574)
+..|+.|.. .+..|.+|-+... ..|...|.||.|.|-++++
T Consensus 45 ysGYv~v~~~~~~~LFYwf~eS~-~~P~~dPlvLWLnGGPGCS 86 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFYWFFESE-NNPETDPLVLWLNGGPGCS 86 (454)
T ss_pred ccceEECCCCCCceEEEEEEEcc-CCCCCCCEEEEeCCCCCcc
Confidence 457888863 5688888866554 3333344589999977754
No 257
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=20.59 E-value=89 Score=30.50 Aligned_cols=28 Identities=32% Similarity=0.604 Sum_probs=22.6
Q ss_pred EEEecccccCceeeecCCCCcHHHHhhhCCceEEEEec
Q 008186 112 LLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEV 149 (574)
Q Consensus 112 ~~llhG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 149 (574)
=+|+.|.|.+ +| +.+|+++||+|+.+|+
T Consensus 40 rvLvPgCG~g---~D-------~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 40 RVLVPGCGKG---YD-------MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp EEEETTTTTS---CH-------HHHHHHTTEEEEEEES
T ss_pred eEEEeCCCCh---HH-------HHHHHHCCCeEEEEec
Confidence 5788887653 44 6789999999999997
Done!