Query 008189
Match_columns 574
No_of_seqs 219 out of 1622
Neff 7.3
Searched_HMMs 46136
Date Thu Mar 28 20:37:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008189.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008189hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0228 Beta-fructofuranosidas 100.0 3E-108 6E-113 850.3 37.7 550 16-569 17-570 (571)
2 COG1621 SacC Beta-fructosidase 100.0 7.9E-94 1.7E-98 764.6 46.2 454 34-568 15-486 (486)
3 TIGR01322 scrB_fam sucrose-6-p 100.0 3.9E-86 8.5E-91 718.3 46.8 414 41-537 7-445 (445)
4 smart00640 Glyco_32 Glycosyl h 100.0 7.5E-82 1.6E-86 683.0 47.9 416 52-526 1-437 (437)
5 PF00251 Glyco_hydro_32N: Glyc 100.0 2.1E-71 4.6E-76 576.1 29.8 296 52-366 1-308 (308)
6 cd08996 GH32_B_Fructosidase Gl 100.0 8.5E-63 1.8E-67 509.2 32.9 283 58-369 1-298 (298)
7 cd08995 GH32_Aec43_like Glycos 100.0 4.8E-54 1E-58 440.2 30.2 264 62-360 4-279 (280)
8 cd08979 GH_J Glycosyl hydrolas 100.0 1.2E-37 2.5E-42 316.7 27.5 243 59-332 6-264 (276)
9 cd08772 GH43_62_32_68 Glycosyl 100.0 7.1E-34 1.5E-38 289.4 27.2 265 62-353 4-285 (286)
10 cd08997 GH68 Glycosyl hydrolas 99.9 6E-25 1.3E-29 228.6 29.3 263 64-357 15-343 (349)
11 cd08994 GH43_like_2 Glycosyl h 99.9 1.2E-21 2.6E-26 201.7 21.3 187 51-245 4-282 (291)
12 cd08993 GH43_DUF377 Glycosyl h 99.8 7.8E-19 1.7E-23 178.9 18.7 146 61-225 2-156 (268)
13 cd08984 GH43_5 Glycosyl hydrol 99.8 1.7E-18 3.7E-23 178.8 20.3 158 62-245 83-246 (294)
14 cd09004 GH43_bXyl Glycosyl hyd 99.8 1.8E-17 3.8E-22 169.5 20.1 188 58-280 6-197 (275)
15 cd08999 GH43_ABN_2 Glycosyl hy 99.7 2.5E-16 5.5E-21 161.6 21.6 189 62-280 12-211 (287)
16 cd08990 GH43_AXH_like Glycosyl 99.7 1.9E-15 4.2E-20 154.4 20.6 193 63-281 5-207 (274)
17 cd08978 GH_F Glycosyl hydrolas 99.6 3.5E-14 7.6E-19 143.7 20.4 189 62-281 4-202 (271)
18 cd08991 GH43_bXyl_2 Glycosyl h 99.6 1.3E-13 2.7E-18 142.3 20.8 177 63-271 5-204 (294)
19 cd08992 GH43_like_1 Glycosyl h 99.6 1.4E-13 3.1E-18 143.6 18.7 167 49-223 25-241 (349)
20 cd08998 GH43_ABN_1 Glycosyl hy 99.5 6.9E-13 1.5E-17 136.6 20.6 174 62-270 5-192 (288)
21 cd08984 GH43_5 Glycosyl hydrol 99.5 1.5E-12 3.2E-17 134.6 20.1 165 62-245 15-193 (294)
22 PF04041 DUF377: Domain of unk 99.5 6E-13 1.3E-17 138.3 14.7 166 56-238 29-201 (312)
23 cd08985 GH43_6 Glycosyl hydrol 99.5 6.5E-12 1.4E-16 127.9 21.5 187 62-281 7-203 (265)
24 cd09000 GH43_XYL_1 Glycosyl hy 99.3 6.2E-11 1.3E-15 122.1 19.7 172 62-270 12-196 (288)
25 cd09003 GH43_AXH_1 Glycosyl hy 99.3 5.3E-11 1.2E-15 124.0 19.2 180 62-270 13-215 (311)
26 PF08244 Glyco_hydro_32C: Glyc 99.3 1E-11 2.3E-16 104.4 9.4 75 443-526 9-86 (86)
27 PF04616 Glyco_hydro_43: Glyco 99.3 1.7E-10 3.7E-15 118.1 20.2 177 62-271 14-200 (286)
28 cd08983 GH43_4 Glycosyl hydrol 99.3 6.9E-10 1.5E-14 113.8 22.2 175 62-269 22-206 (276)
29 cd08988 GH43_ABN Glycosyl hydr 99.2 1.2E-09 2.5E-14 112.2 20.2 176 63-270 5-193 (279)
30 cd08979 GH_J Glycosyl hydrolas 99.2 5.1E-10 1.1E-14 113.6 17.2 131 62-202 70-209 (276)
31 cd08992 GH43_like_1 Glycosyl h 99.1 2.1E-09 4.5E-14 112.5 18.7 166 62-245 116-310 (349)
32 cd08981 GH43_2 Glycosyl hydrol 99.1 4.8E-09 1E-13 108.3 19.5 129 62-201 10-142 (291)
33 cd08989 GH43_XYL Glycosyl hydr 99.0 1.3E-08 2.8E-13 103.9 19.1 168 62-271 12-190 (269)
34 cd08993 GH43_DUF377 Glycosyl h 99.0 3.7E-09 8E-14 107.8 14.9 97 120-225 3-103 (268)
35 cd09001 GH43_XYL_2 Glycosyl hy 99.0 1.1E-08 2.4E-13 104.5 17.3 164 62-271 15-192 (269)
36 COG2152 Predicted glycosylase 99.0 2.1E-08 4.5E-13 101.0 15.9 154 59-228 31-193 (314)
37 cd09002 GH43_XYL_3 Glycosyl hy 98.9 4.2E-08 9.2E-13 100.8 17.8 163 62-271 19-191 (280)
38 cd08980 GH43_1 Glycosyl hydrol 98.9 6E-08 1.3E-12 99.9 18.2 185 63-281 5-205 (288)
39 PF02435 Glyco_hydro_68: Levan 98.9 9.2E-08 2E-12 101.5 19.6 219 27-269 29-318 (428)
40 cd08986 GH43_7 Glycosyl hydrol 98.9 9.6E-08 2.1E-12 97.6 18.1 172 63-270 7-202 (269)
41 cd08987 GH62 Glycosyl hydrolas 98.8 3.6E-07 7.7E-12 92.4 18.5 192 53-284 14-220 (303)
42 cd08982 GH43_3 Glycosyl hydrol 98.7 7.6E-07 1.6E-11 92.2 18.4 167 62-281 7-191 (295)
43 cd08995 GH32_Aec43_like Glycos 98.6 9E-07 1.9E-11 90.7 16.9 129 62-203 66-201 (280)
44 cd08990 GH43_AXH_like Glycosyl 98.6 4.2E-06 9E-11 85.6 18.9 146 62-227 68-220 (274)
45 cd08994 GH43_like_2 Glycosyl h 98.5 6.1E-07 1.3E-11 92.5 12.3 105 62-170 84-198 (291)
46 cd08999 GH43_ABN_2 Glycosyl hy 98.5 2.2E-06 4.7E-11 88.0 15.9 151 62-225 66-227 (287)
47 cd08991 GH43_bXyl_2 Glycosyl h 98.5 1E-05 2.2E-10 83.4 19.8 154 62-228 59-233 (294)
48 PF04041 DUF377: Domain of unk 98.4 2.6E-06 5.6E-11 88.9 14.0 103 114-225 29-134 (312)
49 cd08983 GH43_4 Glycosyl hydrol 98.4 4.1E-06 8.9E-11 85.9 14.2 89 166-270 5-99 (276)
50 cd08978 GH_F Glycosyl hydrolas 98.4 8E-06 1.7E-10 82.5 16.2 149 62-223 63-215 (271)
51 cd08986 GH43_7 Glycosyl hydrol 98.3 5E-06 1.1E-10 85.0 12.8 121 181-326 2-147 (269)
52 cd08772 GH43_62_32_68 Glycosyl 98.3 1.2E-05 2.7E-10 81.5 15.5 151 62-223 64-224 (286)
53 cd08996 GH32_B_Fructosidase Gl 98.2 1.8E-05 3.8E-10 81.9 13.2 131 62-203 67-202 (298)
54 cd08981 GH43_2 Glycosyl hydrol 98.1 3.2E-05 6.9E-10 80.0 13.7 124 179-326 4-139 (291)
55 cd08989 GH43_XYL Glycosyl hydr 98.1 3.3E-05 7.1E-10 79.0 13.3 78 167-270 1-87 (269)
56 cd08998 GH43_ABN_1 Glycosyl hy 98.1 8.4E-05 1.8E-09 76.5 16.3 147 62-221 62-217 (288)
57 cd08985 GH43_6 Glycosyl hydrol 98.1 0.00022 4.8E-09 72.7 19.0 142 62-226 69-215 (265)
58 cd09002 GH43_XYL_3 Glycosyl hy 98.1 4.6E-05 9.9E-10 78.4 14.0 78 166-270 7-84 (280)
59 cd09004 GH43_bXyl Glycosyl hyd 98.1 0.00023 4.9E-09 72.8 18.3 138 62-226 70-214 (275)
60 PF04616 Glyco_hydro_43: Glyco 98.0 0.00013 2.7E-09 74.7 13.9 151 59-223 68-222 (286)
61 cd08997 GH68 Glycosyl hydrolas 97.9 0.0003 6.6E-09 74.1 15.4 152 62-222 75-284 (349)
62 TIGR01322 scrB_fam sucrose-6-p 97.9 0.00016 3.5E-09 79.3 13.6 131 62-202 90-225 (445)
63 cd09001 GH43_XYL_2 Glycosyl hy 97.7 0.0018 3.8E-08 66.2 17.9 130 62-223 80-213 (269)
64 COG3507 XynB Beta-xylosidase [ 97.7 0.00069 1.5E-08 73.9 14.3 153 88-271 55-226 (549)
65 cd08988 GH43_ABN Glycosyl hydr 97.7 0.0015 3.2E-08 67.1 16.1 141 62-218 61-214 (279)
66 cd09003 GH43_AXH_1 Glycosyl hy 97.7 0.003 6.6E-08 65.9 18.4 146 62-227 82-248 (311)
67 cd08980 GH43_1 Glycosyl hydrol 97.6 0.0026 5.7E-08 65.5 17.6 151 62-228 59-228 (288)
68 smart00640 Glyco_32 Glycosyl h 97.6 0.00051 1.1E-08 75.2 12.1 132 62-202 73-215 (437)
69 COG2152 Predicted glycosylase 97.6 0.00064 1.4E-08 69.1 11.4 103 116-227 30-139 (314)
70 PF13088 BNR_2: BNR repeat-lik 97.3 0.017 3.6E-07 58.6 18.9 167 57-245 46-217 (275)
71 cd09000 GH43_XYL_1 Glycosyl hy 97.3 0.012 2.6E-07 60.5 16.8 139 62-223 72-219 (288)
72 cd00260 Sialidase Sialidases o 97.1 0.041 9E-07 58.0 19.8 164 45-224 58-239 (351)
73 PF03664 Glyco_hydro_62: Glyco 97.1 0.054 1.2E-06 53.6 17.8 184 53-272 16-209 (271)
74 PF13088 BNR_2: BNR repeat-lik 97.0 0.24 5.2E-06 50.1 23.1 161 68-245 1-168 (275)
75 cd08987 GH62 Glycosyl hydrolas 96.8 0.046 9.9E-07 56.0 15.5 140 62-223 82-230 (303)
76 PF00251 Glyco_hydro_32N: Glyc 96.2 0.11 2.3E-06 54.2 14.7 127 120-269 12-148 (308)
77 cd00260 Sialidase Sialidases o 94.9 6 0.00013 41.5 22.3 168 63-245 21-207 (351)
78 cd08982 GH43_3 Glycosyl hydrol 94.8 0.3 6.6E-06 50.6 11.8 79 116-200 159-238 (295)
79 COG3507 XynB Beta-xylosidase [ 92.7 1.5 3.3E-05 48.5 12.6 141 62-218 95-243 (549)
80 PF13859 BNR_3: BNR repeat-lik 92.0 0.93 2E-05 47.4 9.7 140 63-224 65-213 (310)
81 COG3940 Predicted beta-xylosid 85.4 5.8 0.00013 38.8 9.1 104 63-171 137-247 (324)
82 PF02435 Glyco_hydro_68: Levan 83.4 33 0.00071 37.4 14.8 128 67-203 143-320 (428)
83 KOG0228 Beta-fructofuranosidas 82.2 14 0.00029 40.8 11.2 113 96-224 45-167 (571)
84 COG1621 SacC Beta-fructosidase 81.4 19 0.0004 40.0 12.3 96 126-230 50-154 (486)
85 PTZ00334 trans-sialidase; Prov 77.8 17 0.00038 42.5 11.1 87 120-224 263-350 (780)
86 PF13810 DUF4185: Domain of un 73.5 87 0.0019 32.9 14.1 150 62-223 99-272 (316)
87 PF13810 DUF4185: Domain of un 63.7 32 0.0007 36.0 8.5 91 126-224 103-210 (316)
88 PF03664 Glyco_hydro_62: Glyco 55.7 2.4E+02 0.0051 28.6 15.7 137 63-223 81-229 (271)
89 PF06905 FAIM1: Fas apoptotic 55.3 37 0.0008 32.5 6.5 32 507-539 107-138 (177)
90 PF06439 DUF1080: Domain of Un 31.4 1.5E+02 0.0032 27.6 6.8 55 505-563 127-184 (185)
91 smart00276 GLECT Galectin. Gal 22.5 4E+02 0.0087 23.6 7.5 26 505-531 76-101 (128)
92 PF02012 BNR: BNR/Asp-box repe 21.2 59 0.0013 17.1 1.0 11 149-163 2-12 (12)
93 PF12113 SVM_signal: SVM prote 20.4 78 0.0017 21.7 1.7 22 6-27 10-32 (33)
94 PF00337 Gal-bind_lectin: Gala 20.3 6E+02 0.013 22.4 13.6 51 505-562 82-132 (133)
No 1
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-108 Score=850.33 Aligned_cols=550 Identities=61% Similarity=1.031 Sum_probs=501.7
Q ss_pred hheeecCCcccccccCCCccccc-hhhhccCcccccceeecCCCceeeeEEECCEEEEEEeeCCCCCCCCccEEEEeecC
Q 008189 16 LWVISNNNGVEASHKIYPEFQSL-AAVKVKQLHRTAFHFQPPKHWINGPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSK 94 (574)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~RP~~H~~p~~gw~Ng~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~ 94 (574)
+.+--+.-++++.|..+-.|++- ++...+.++||.|||+|+.|||||++|++|.|||||||||++..||+.+||||+|+
T Consensus 17 ~~~~~~vk~~da~~~~~~~l~~~s~~~~~n~~~Rp~~HFqP~k~wMN~P~~ykG~yHLFyQyNP~gavwg~ivWGHavSk 96 (571)
T KOG0228|consen 17 LNLTNYVKGLDAFHQNYAGLQSESPSNTVNQPDRPGFHFQPPKGWMNDPMYYKGKYHLFYQYNPKGAVWGNIVWGHAVSK 96 (571)
T ss_pred HhhhhhhhhhhhhhhhhhhhcccCccccccccCCceeecCCCcccccCccccCcEEEEEEecCCCCceeeeeEeeeecch
Confidence 33333344788999998888776 45557789999999999999999999999999999999999999999999999999
Q ss_pred CcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecC-
Q 008189 95 DLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPG- 173 (574)
Q Consensus 95 Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~- 173 (574)
||+||+.+|+||.|++++|..|||||||+++.+|++.++|||.+...+|+|.+|+..|.+|++|+.|.|.+++|++.++
T Consensus 97 DLinW~~lp~Ai~Ps~~~ding~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~ 176 (571)
T KOG0228|consen 97 DLINWEALPPAIAPSEWFDINGCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDK 176 (571)
T ss_pred hhccccccCcccCCCCccccCccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeecccc
Confidence 9999999999999999999999999999999999999999999988889999999999999999999999999999877
Q ss_pred -CCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEeccCCCCcc
Q 008189 174 -PDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGL 252 (574)
Q Consensus 174 -~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~ 252 (574)
.+.....||||+++|++++|+|+|++|...+.+|.+.+|+|+|+++|+....|++....++||||||||++..+|++|+
T Consensus 177 V~~in~s~FRDPttaW~~~dgkWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~~g~ 256 (571)
T KOG0228|consen 177 VLGINSSQFRDPTTAWFGQDGKWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGTDGL 256 (571)
T ss_pred ccCCChhhccCCceeeecCCCcEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCCCCc
Confidence 6777899999999999999999999999887889999999999999999988998888899999999999999999998
Q ss_pred ccccCCCCceEEEEEeecCCceeEEEEEEEeCCCCccccCCCCCCCCcceecccCCCccceeeeeCCCCcEEEEEeccCC
Q 008189 253 DTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANES 332 (574)
Q Consensus 253 ~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~fYA~~t~~~~~~gr~i~~gW~~~~ 332 (574)
.++..+...|||+..|...++..+|+||++|+.+.+|+|+..+.+.....+.|||.|||.|||.|..++|||+|||++++
T Consensus 257 d~s~~~~~nkhvlkasl~gt~~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa~es 336 (571)
T KOG0228|consen 257 DWSLFGSINKHVLKASLGGTSNDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWASES 336 (571)
T ss_pred eEEEeccccccccccccCCceeEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEecccC
Confidence 87766555699999998888899999999999888999998766543445789999999999999889999999999999
Q ss_pred CCCCCCCCCCccccccccEEEEEec-CCCeEEEcchHHHHhhhcCceeeccceecCcceEEEcccccceeEEEEEEEecC
Q 008189 333 DSTFDDMAKGWAGVQTIPREVWLDG-SGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPS 411 (574)
Q Consensus 333 ~~~~~~~~~gW~g~lslPReL~l~~-~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 411 (574)
++..+..+.||+|.|++||+++|+. .|+.|.|.|+.|++.||...+...+..++++...+..++++.+.++|++|++..
T Consensus 337 ~~~~dd~~kgw~g~qtipRki~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~~~~ 416 (571)
T KOG0228|consen 337 DYTNDDPTKGWRGLQTIPRKIWLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFEVED 416 (571)
T ss_pred cccccchhcccccccccceEEEeeccCCCcccccchheeecccccccCccccccCCceeEEecccccccccceEEEEecc
Confidence 9998889999999999999999997 688999999999999999988766666777888888999999999999999988
Q ss_pred CCcccccCCCcccccccccccccCcccccCccceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCCCCCcccCCcc
Q 008189 412 LDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLY 491 (574)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~~~~~ 491 (574)
++++..++.++. +++..|...+.++.++.++||+..+++.|.+|+|.+.|.+.+......+++|.|..+|++. .+.+
T Consensus 417 Leka~~~~~~~t--~~~~~c~~~~~~v~~~~gpfgl~~la~~dl~eyt~v~f~i~k~~~~~~v~~csd~~~sSl~-~d~~ 493 (571)
T KOG0228|consen 417 LEKAIVIEPSWT--DPQFLCLTGGSSVREGLGPFGLMVLASSDLEEYTPVGFRIFKAKKKYVVLMCSDQSRSSLA-EDNY 493 (571)
T ss_pred cccccccCcccc--ccceeeecCCcccccCCCcceEEEEeecCcccceeeeEEEeecCCcceeEEeccCCCcccc-cccc
Confidence 888888888884 6788898888888999999999999999999999999999986666688899999999987 6778
Q ss_pred ccccceEEEEecCCCeEEEEEEEeCCeEEEEcCCCceEEEEeeecCCCcCCCceEEEEeCCceeEEEeEEeeecCCCC
Q 008189 492 KPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKP 569 (574)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~LrIfvD~S~vEvFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~~~~i~~l~~w~m~~~ 569 (574)
++.+++.+.+.+ .++++||++||+|+||.|+|+|+.++|+|+||..+...+..+++|++|.-.+.|.++.+|+|+.+
T Consensus 494 k~~~~afvdv~~-~~~islr~LiDhsivEsyg~~G~t~iTsrvyp~~ai~~~~~lf~fn~g~~~v~v~sl~aw~m~~~ 570 (571)
T KOG0228|consen 494 KPSIGAFVDVYP-HQKISLRSLIDHSIVESYGNGGKTVITSRVYPTLAIGEGAHLFVFNNGSQLVNVTSLNAWSMKNA 570 (571)
T ss_pred ccceeeEEEecC-CCccchhhhhhhhhHHHhccCCcEEEEeeeeeeecccccceEEEecccccceEEEEeehhhcccC
Confidence 899999998877 89999999999999999999999999999999998777889999998888899999999999976
No 2
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.9e-94 Score=764.58 Aligned_cols=454 Identities=31% Similarity=0.561 Sum_probs=356.3
Q ss_pred ccccchhhhccCcccccceeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCC
Q 008189 34 EFQSLAAVKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSK 110 (574)
Q Consensus 34 ~~~~~~~~~~~~~~RP~~H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~ 110 (574)
++..++.....++|||.|||+||.|||| |++|++|+|||||||+|+++.||++|||||+|+|||||+++|+||.|+.
T Consensus 15 ~~~~~~~~~~~~~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~ 94 (486)
T COG1621 15 ELEKISESVAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDD 94 (486)
T ss_pred hHhhhhhhccCCCCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCC
Confidence 4556667777799999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CccCCCeEeeeEEEcCCCeeEEEEeeecC----CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCee
Q 008189 111 PFDINGCWSGSATVLPGNKPIILYTGVDH----KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTT 186 (574)
Q Consensus 111 ~~D~~gv~SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~V 186 (574)
.+|.+||||||||++ +|...+||||+.+ .+.+.||+|+|+|+ .+|+|+.++||+..|+++ +.+||||||
T Consensus 95 ~~d~~g~ySGSAV~~-~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv 167 (486)
T COG1621 95 DYDSHGCYSGSAVVD-DGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKV 167 (486)
T ss_pred ccccCCceeeeEEEe-CCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCcc
Confidence 999999999999985 8999999999865 36789999999995 688887678899888876 899999999
Q ss_pred EEecCCCeEEEEEeeec-CCeeEEEEEEeCCCCCCEEccccccc-CCCCCccccceeEEeccCCCCccccccCCCCceEE
Q 008189 187 AWWSNDGHWRMLVGSRR-KHRGMAYLYRSRDFMKWTKAKHPIHS-LANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFV 264 (574)
Q Consensus 187 vw~~~~g~~~M~~g~~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~-~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~v 264 (574)
+|+ ++++|+|++||+. +..|+|+||+|+||++|++.|++... ...++||||||||+|+.+ +. ..+|+
T Consensus 168 ~w~-~~~~~~~mlgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~~~--~~--------~~~~p 236 (486)
T COG1621 168 VWD-EGGKWWMMLGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGE--DV--------LLFWP 236 (486)
T ss_pred ccc-CCCcEEEEEEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEecCc--Cc--------eEEcc
Confidence 898 7889999999987 56789999999999999999976555 345679999999999943 22 23677
Q ss_pred EEEeecC-----CceeEEEEEEEeCCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCC--C
Q 008189 265 LKVSLDL-----TRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDST--F 336 (574)
Q Consensus 265 l~~s~~~-----~~~~~Y~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~--~ 336 (574)
+.++.++ ...++|++|+||++ +|.+..+ .+++||+|+ |||||||.++ +||||++|||++|++. .
T Consensus 237 qg~~~~~~~~~n~~~~~Y~vG~~dg~--~f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~ 308 (486)
T COG1621 237 QGLSINGGEYDNIYQSGYFVGDFDGK--EFKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNY 308 (486)
T ss_pred eeeecCCCcCCCcceeEEEEEeeccc--eeEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCC
Confidence 7777643 35689999999986 6665543 367999999 9999999984 8999999999999987 5
Q ss_pred CCCCCCccccccccEEEEEecCCCeEEEcchHHHHhhhcCceeeccceecCcceEEEcccccceeEEEEEEEecCCCccc
Q 008189 337 DDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAE 416 (574)
Q Consensus 337 ~~~~~gW~g~lslPReL~l~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 416 (574)
++..++|+|||||||||+|+ +| +|+|+|++||++||..+....+..++.. ..+....+.++++++.+..
T Consensus 309 PT~~~~w~~~mTlpRel~l~-~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~--~~l~~~~~~~~~l~~~~~~------- 377 (486)
T COG1621 309 PTIDEGWRGAMTLPRELTLE-DG-KLYQTPVRELESLRKPEEAAHNTTLSGN--SKLELPSGDAYELDLDLIW------- 377 (486)
T ss_pred CccccCcCccceeeEEEEEc-CC-eEEecchHHHHhhhcccccccccccccc--eeeeccCCccEEEEEEeec-------
Confidence 66667999999999999996 56 6999999999999998665555555443 2233334444444332211
Q ss_pred ccCCCcccccccccccccCcccccCccceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCCCCCcccCCccccccc
Q 008189 417 KFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFA 496 (574)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~~~~~~~~~~ 496 (574)
.....+|+.++.+.. .+.++.. +. .+++||++|... ....+
T Consensus 378 -----------------------~~~~~~~~~l~~~~~-----~~~~~~~---~~---~l~ldR~~s~~f-----~~~~~ 418 (486)
T COG1621 378 -----------------------TDATSFGLELRMGLN-----LVGYDVE---NE---TLTLDRSDSPLF-----TVQDG 418 (486)
T ss_pred -----------------------cccceEEEEeecCcc-----eeccccc---cc---eEEEeccccccc-----cccCC
Confidence 011357788776543 3444332 12 256788887111 11222
Q ss_pred eEEEEecC-CCeEEEEEEEeCCeEEEEcCCCceEEEEeeecCCCcCCCceEEEEeCCceeEEEeEEeeecCCC
Q 008189 497 GFVNVDLS-DKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKK 568 (574)
Q Consensus 497 ~~~~~~~~-~~~~~LrIfvD~S~vEvFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~~~~i~~l~~w~m~~ 568 (574)
..+.+.+. ..+++||||||+|+||||+|||+.|+|+|+||.... ++++|.+ .. +.+.+.. ++|.+++
T Consensus 419 ~~r~~~~~~~~~v~l~if~D~ssvEiF~NdGe~v~T~rifp~~~~-~~i~l~~--~~-g~~~~~~-~~~~l~~ 486 (486)
T COG1621 419 ETRECFIENGAKVHLRIFVDNSSVEIFINDGEKVFTSRIFPTPDA-NGISLYS--DQ-GVAVVQN-TIWPLKS 486 (486)
T ss_pred ceeeeccCCCceEEEEEEEeCCeEEEEEcCCceEEEEEecCCCcc-cceEEEc--cC-ceEEEEe-eeeccCC
Confidence 23444333 344899999999999999999999999999998873 3555543 32 2344433 8898874
No 3
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=100.00 E-value=3.9e-86 Score=718.33 Aligned_cols=414 Identities=32% Similarity=0.557 Sum_probs=326.4
Q ss_pred hhccCcccccceeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCe
Q 008189 41 VKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGC 117 (574)
Q Consensus 41 ~~~~~~~RP~~H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv 117 (574)
...+++|||+|||+|+.|||| |++|++|+||||||++|.++.||++|||||+|+|||||+++|+||.|++.+|..||
T Consensus 7 ~~~~~~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~ 86 (445)
T TIGR01322 7 RALQSEWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGC 86 (445)
T ss_pred hhccCCcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCce
Confidence 345689999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeEEEcCCCeeEEEEeeecC----CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCC
Q 008189 118 WSGSATVLPGNKPIILYTGVDH----KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDG 193 (574)
Q Consensus 118 ~SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g 193 (574)
|||||++ .+|+++|||||+.. .+.+.|++|+|.|+ .+|+|+. +|||.+++.....+||||+| |+ .+|
T Consensus 87 ~sGsav~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g 157 (445)
T TIGR01322 87 YSGSAVD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNG 157 (445)
T ss_pred EECeEEe-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECC
Confidence 9999987 58999999999753 24578999999885 6999974 59997644434578999996 55 478
Q ss_pred eEEEEEeeec-CCeeEEEEEEeCCCCCCEEcccccccC-----CCCCccccceeEEeccCCCCccccccCCCCceEEEEE
Q 008189 194 HWRMLVGSRR-KHRGMAYLYRSRDFMKWTKAKHPIHSL-----ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKV 267 (574)
Q Consensus 194 ~~~M~~g~~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~-----~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~ 267 (574)
+|||++|++. +..|++.+|+|+||++|++.+.+.... +.+.|||||+||+|+ | ||||++
T Consensus 158 ~~~M~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~--~-------------k~vL~~ 222 (445)
T TIGR01322 158 HWYMVIGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLD--G-------------QDVLLF 222 (445)
T ss_pred EEEEEEEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEEC--C-------------cEEEEE
Confidence 9999999886 456899999999999999998654332 245699999999997 5 899999
Q ss_pred eecCC----------ceeEEEEEEEeCCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCCC
Q 008189 268 SLDLT----------RYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDSTF 336 (574)
Q Consensus 268 s~~~~----------~~~~Y~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~~ 336 (574)
|..+. ..++|++|+||..+.+|++++. ++++|+|+ |||+|+|.++ +|||||||||++|+...
T Consensus 223 s~~g~~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~ 295 (445)
T TIGR01322 223 SPQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDY 295 (445)
T ss_pred eccccCcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCC
Confidence 86531 2368999999977789987643 46899999 9999999975 79999999999998766
Q ss_pred CCCCCCccccccccEEEEEecCCCeEEEcchHHHHhhhcCceeeccceecCcceEEEcccccceeEEEEEEEecCCCccc
Q 008189 337 DDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAE 416 (574)
Q Consensus 337 ~~~~~gW~g~lslPReL~l~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 416 (574)
++.+.+|+|+|||||+|+|+ +| +|+|+|++||++||..... . .. ......+.+.. .+++|+++++.
T Consensus 296 ~~~~~~W~g~lslpR~l~l~-~g-~L~~~Pv~el~~lr~~~~~--~-~~-~~~~~~~~~~~-~~~~l~~~~~~------- 361 (445)
T TIGR01322 296 PTDRDGWAHCMTLPRELTLK-DG-KLVQTPLRELKALRTEEHI--N-VF-GDQEHTLPGLN-GEFELILDLEK------- 361 (445)
T ss_pred CCccCCcccccccCEEEEEe-CC-eEEEEEhHHHHHHhcCccc--c-cc-ccccccccCCC-ceEEEEEEecC-------
Confidence 66678999999999999997 57 7999999999999986542 0 11 11111122222 23444433311
Q ss_pred ccCCCcccccccccccccCcccccCccceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCCCCCcccCCccccccc
Q 008189 417 KFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFA 496 (574)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~~~~~~~~~~ 496 (574)
+....+||.+ .+ .++.+.|.|+..+ +. +++||++++.. ...+
T Consensus 362 -----------------------~~~~~~~l~~-~~--~~~~~~i~~~~~~---~~---l~~dr~~~~~~------~~~~ 403 (445)
T TIGR01322 362 -----------------------DSAFELGLAL-TN--KGEETLLTIDADE---GK---VTLDRRSSGNL------EDYG 403 (445)
T ss_pred -----------------------CCccEEEEEE-eC--CCCeEEEEEECcC---CE---EEEEccCCCCc------CCcc
Confidence 0113688887 44 2457999998653 32 45699887632 1111
Q ss_pred eEEEEec-CCCeEEEEEEEeCCeEEEEcCCCceEEEEeeecC
Q 008189 497 GFVNVDL-SDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPT 537 (574)
Q Consensus 497 ~~~~~~~-~~~~~~LrIfvD~S~vEvFvNdG~~~lT~Riyp~ 537 (574)
..+.+.+ .+++++||||||+|+||||||||+.|||+|+||+
T Consensus 404 ~~~~~~~~~~~~~~l~i~vD~s~vEvFvn~G~~~~t~riyp~ 445 (445)
T TIGR01322 404 GTRSCPLPNTKKVSLHIFIDKSSVEIFINDGEEVMTSRIFPD 445 (445)
T ss_pred ceEEEEcCCCCeEEEEEEEECCEEEEEECCCEEEEEEeccCC
Confidence 1222222 3478999999999999999999999999999985
No 4
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=100.00 E-value=7.5e-82 Score=682.98 Aligned_cols=416 Identities=47% Similarity=0.831 Sum_probs=318.1
Q ss_pred eeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCC
Q 008189 52 HFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGN 128 (574)
Q Consensus 52 H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg 128 (574)
||+|+.|||| |++|++|+||||||++|.++.||+++||||+|+||+||+++|+||.|+..+|..|||||||+++ +|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~~-~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVID-PG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEEC-CC
Confidence 9999999999 9999999999999999999999999999999999999999999999999999999999999985 77
Q ss_pred eeEEEEeeecCC------CcceE-EEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEee
Q 008189 129 KPIILYTGVDHK------ERQVQ-NYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGS 201 (574)
Q Consensus 129 ~~~l~YTg~~~~------~~~~q-~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~ 201 (574)
++++||||+... ..+.| +.|.++| +++|+|++++|||.+++++...+||||+|+|+ ++++|||++|+
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d-----~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g~ 153 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDL-----GGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIGA 153 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCC-----CCeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEEE
Confidence 899999997421 12333 4444444 38999997899998766666789999998777 44799999998
Q ss_pred ec-CCeeEEEEEEeCCCCCCEEccccccc--CCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEEE
Q 008189 202 RR-KHRGMAYLYRSRDFMKWTKAKHPIHS--LANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYT 278 (574)
Q Consensus 202 ~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~--~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~ 278 (574)
+. +..|+|.+|+|+||++|++.+.++.. ...+.|||||+||+|+++| .+.||||++|.++...+.|+
T Consensus 154 ~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y~ 223 (437)
T smart00640 154 SDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYYF 223 (437)
T ss_pred EecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEEE
Confidence 76 45799999999999999999865443 2345899999999998544 23599999999876778999
Q ss_pred EEEEeCCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCC-CCCCCCCCccccccccEEEEEe
Q 008189 279 IGTYNRDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDS-TFDDMAKGWAGVQTIPREVWLD 356 (574)
Q Consensus 279 vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~-~~~~~~~gW~g~lslPReL~l~ 356 (574)
+|++++. .+|+|+.... ....+++|+|+ |||||+|.+++++|+||||||++++. ....+..+|+|+|||||||+|+
T Consensus 224 ~G~~~g~-~~f~~~~~~~-~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l~ 301 (437)
T smart00640 224 VGYFDGS-DQFTPDDPED-VGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTLD 301 (437)
T ss_pred EEEEcCc-eeEeECCccc-cCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEEE
Confidence 9999863 4798876421 12345899998 99999999865569999999999974 2233348999999999999995
Q ss_pred -cCCCeEEEcchHHHHhhhcCceeeccceecCcceEEEc--ccccceeEEEEEEEecCCCcccccCCCcccccccccccc
Q 008189 357 -GSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVK--GVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGK 433 (574)
Q Consensus 357 -~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (574)
.+| +|+|+|++||++||... ......+..+....+. ...+.+++|+++++...
T Consensus 302 ~~~g-~L~~~Pv~el~~lr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~---------------------- 357 (437)
T smart00640 302 KTGG-KLLQWPVEELESLRNVK-ELSNLTLKPGSVNELLGLTASGDAYEIELSFEVDS---------------------- 357 (437)
T ss_pred ecCC-EEEEeecHHHHhhhCcc-cccceeecCCceeeeecccCCccEEEEEEEEEeCC----------------------
Confidence 566 79999999999999542 2222223222211111 12344566666654420
Q ss_pred cCcccccCccceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCCCCCcccCCccccccceEEE--Eec-CCCeEEE
Q 008189 434 IGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFAGFVN--VDL-SDKKLSL 510 (574)
Q Consensus 434 ~~~~~~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~~~~~~~~~~~~~~--~~~-~~~~~~L 510 (574)
..+..+||.+++++++++.+.|.|+... +. +++||++++.. ......+.+. +.+ .+++++|
T Consensus 358 ------~~~~~~~l~~~~~~~~~~~~~i~~~~~~---~~---l~vdR~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l 421 (437)
T smart00640 358 ------GGAGPFGLLVLASEDLSEQTAVYFDVSK---GT---LCLDRRSSGTS----NDEVFKGVRGATVPVDPGETLSL 421 (437)
T ss_pred ------CcceeEEEEEEeCCCCCceEEEEEEcCC---eE---EEEecCCCCCC----cccccccceeeeeecCCCCeEEE
Confidence 0013689999998888889999998653 32 56799766521 1111111121 122 2468999
Q ss_pred EEEEeCCeEEEEcCCC
Q 008189 511 RSLIDHSVVESFGAGG 526 (574)
Q Consensus 511 rIfvD~S~vEvFvNdG 526 (574)
|||||+||||||+|||
T Consensus 422 ri~vD~ssvEvf~ndG 437 (437)
T smart00640 422 RILVDHSSVEIFANGG 437 (437)
T ss_pred EEEEeceEEEEEeCCC
Confidence 9999999999999987
No 5
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=100.00 E-value=2.1e-71 Score=576.08 Aligned_cols=296 Identities=43% Similarity=0.840 Sum_probs=245.1
Q ss_pred eeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCC
Q 008189 52 HFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGN 128 (574)
Q Consensus 52 H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg 128 (574)
||+|+.|||| |++|++|+||||||++|+++.||+++||||+|+|||||+++|+||.|++.+|++|||||||+++ ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 9999999999 9999999999999999999999999999999999999999999999999999999999999986 66
Q ss_pred eeEEEEeeecCCCcceEEEEEecCCCCcccceeeccC-CCceEec-CCCCCCcCccCCeeEEecCCCeEEEEEeeecCCe
Q 008189 129 KPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPD-NNPVVFP-GPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHR 206 (574)
Q Consensus 129 ~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~-~~Pvi~~-~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~ 206 (574)
+++|||||+.+...+.|++|+|.|.+ ++|+|++ ++|||.. |++ ...+||||+|+|. ++++|+|++|++.+..
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~-~~~~~~m~~g~~~~~~ 153 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWR-EDGRWYMLLGAGRDGR 153 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEE-CTTEEEEEEEEEETTE
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEe-cCCEEEEEEeccccCc
Confidence 89999999987668999999996653 8999998 4999975 444 6799999998898 4699999999998888
Q ss_pred eEEEEEEeCCCCCCEEcccccccCC-CCCccccceeEEeccCCCCccccccCCCCceEEEEEee----cCCceeEEEEEE
Q 008189 207 GMAYLYRSRDFMKWTKAKHPIHSLA-NTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSL----DLTRYDYYTIGT 281 (574)
Q Consensus 207 G~i~ly~S~Dl~~W~~~~~~l~~~~-~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~----~~~~~~~Y~vG~ 281 (574)
|+|++|+|+||++|++.+.+..... .+.|||||+||+|+..+.. ....+|||++|. .....+.|++|+
T Consensus 154 g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~~-------~~~~~~vl~~s~~g~~~~~~~~~Y~vG~ 226 (308)
T PF00251_consen 154 GCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGDG-------TGKWVWVLIFSPQGIEDNGHGTYYMVGD 226 (308)
T ss_dssp EEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTSS-------SEEEEEEEEEEEESTTTTTTEEEEEEEE
T ss_pred ceEEEEEcCCcccCceeCcccccccccccccccceEEEECCcccc-------cceEEEEEEecccccccccccceEEeEE
Confidence 9999999999999999986554433 4789999999999954210 012357999998 345789999999
Q ss_pred EeCCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCC-CCCCCCCccccccccEEEEEecCC
Q 008189 282 YNRDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDST-FDDMAKGWAGVQTIPREVWLDGSG 359 (574)
Q Consensus 282 ~d~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~-~~~~~~gW~g~lslPReL~l~~~g 359 (574)
||..+++|+++.. ..+++|+|+ |||+|+|.++.++||||||||+++++. ....+.+|+|+|||||||+|++++
T Consensus 227 ~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~~~ 301 (308)
T PF00251_consen 227 FDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKDEG 301 (308)
T ss_dssp EETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEETTS
T ss_pred ecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEECC
Confidence 9877789987621 268999999 999999999755599999999999874 223368999999999999997644
Q ss_pred CeEEEcc
Q 008189 360 KQLLQWP 366 (574)
Q Consensus 360 ~~L~q~P 366 (574)
.+|+|+|
T Consensus 302 ~~L~q~P 308 (308)
T PF00251_consen 302 GRLYQKP 308 (308)
T ss_dssp SSEEEEE
T ss_pred CeEEEcC
Confidence 5799998
No 6
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=100.00 E-value=8.5e-63 Score=509.18 Aligned_cols=283 Identities=41% Similarity=0.793 Sum_probs=242.6
Q ss_pred Ccee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEE
Q 008189 58 HWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILY 134 (574)
Q Consensus 58 gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~Y 134 (574)
|||| |++|++|+||||||++|.++.|++++||||+|+||+||+++++||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 7999 9999999999999999999999999999999999999999999999988889999999999986449999999
Q ss_pred eeecC---CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEE
Q 008189 135 TGVDH---KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHRGMAY 210 (574)
Q Consensus 135 Tg~~~---~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~G~i~ 210 (574)
||+.. .+.+.|++|+|+|. +++|+|...+|++.+ +.....+||||+|++. +|+|+|+++++. +..|+|.
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~-~~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i~ 153 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPP-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRIL 153 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcC-CCCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEEE
Confidence 99864 46789999999853 389999988888863 3335679999997665 499999999986 3568999
Q ss_pred EEEeCCCCCCEEccccc-ccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCC------ceeEEEEEEEe
Q 008189 211 LYRSRDFMKWTKAKHPI-HSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLT------RYDYYTIGTYN 283 (574)
Q Consensus 211 ly~S~Dl~~W~~~~~~l-~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~------~~~~Y~vG~~d 283 (574)
+|+|+||.+|++.+.+. .....+.|||||+||+++++ .||||++|.+.. ..+.|++|+++
T Consensus 154 ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~-------------~k~vL~~s~~~~~~~~~~~~~~y~~G~~~ 220 (298)
T cd08996 154 LYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVE-------------GKWVLIFSPQGLEPEGNGSGTGYLVGDFD 220 (298)
T ss_pred EEECCCCCCCEEcceecccCCCccceEeCCcEEEECCC-------------CeEEEEECCCCCCCCCCccceEEEEEEEE
Confidence 99999999999987542 23345679999999999842 299999998643 45799999999
Q ss_pred CCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEEEecCCCeE
Q 008189 284 RDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQL 362 (574)
Q Consensus 284 ~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~g~~L 362 (574)
+. .|+++.. ..+++|+|+ |||+|+|.++ ++|+||||||++++...+..+.+|+|+|||||||+|++++ +|
T Consensus 221 ~~--~~~~~~~-----~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~~~-~l 291 (298)
T cd08996 221 GT--TFTFDHT-----EFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKDGG-RL 291 (298)
T ss_pred CC--CCeEecC-----CceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEccCC-EE
Confidence 75 6765421 257899998 9999999986 7999999999999987777889999999999999999765 79
Q ss_pred EEcchHH
Q 008189 363 LQWPIEE 369 (574)
Q Consensus 363 ~q~Pv~e 369 (574)
.|+|++|
T Consensus 292 ~~~P~~e 298 (298)
T cd08996 292 YQRPVRE 298 (298)
T ss_pred EEEeCCC
Confidence 9999975
No 7
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=100.00 E-value=4.8e-54 Score=440.17 Aligned_cols=264 Identities=26% Similarity=0.426 Sum_probs=220.6
Q ss_pred eeEEECCEEEEEEeeCCCCCCC--CccEEEEeecCCcCCceecccccCC-CCCccCCCeEeeeEEEcCCCeeEEEEeeec
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVW--GNIVWAHSVSKDLINWEALEPALYP-SKPFDINGCWSGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~--g~~~Wgha~S~Dlv~W~~~~~al~P-~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 138 (574)
.++|++|+||||||++|.++.| ++++||||+|+||+||+++++||.| +..+|..|||||||++ .+|+++|||||+.
T Consensus 4 ~~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~YTg~~ 82 (280)
T cd08995 4 MPFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAFYTGHN 82 (280)
T ss_pred cceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEEEEEEC
Confidence 4789999999999999999888 8999999999999999999999988 4567789999999987 4899999999986
Q ss_pred CC--CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CCeeEEEE
Q 008189 139 HK--ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-----KHRGMAYL 211 (574)
Q Consensus 139 ~~--~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-----~~~G~i~l 211 (574)
.. ..+.|++|+|+|+ ++|+|...+||+.++.++...+||||+|++.+.+|+|||+++++. +..|+|.+
T Consensus 83 ~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g~i~~ 157 (280)
T cd08995 83 LDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIAL 157 (280)
T ss_pred CCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCeEEEE
Confidence 42 4678999999885 799998778988755555667899999776645799999999875 35689999
Q ss_pred EEeCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC-CceeEEEEEEEeCCCCccc
Q 008189 212 YRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL-TRYDYYTIGTYNRDKDRYV 290 (574)
Q Consensus 212 y~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~-~~~~~Y~vG~~d~~~~~F~ 290 (574)
|+|+||++|++.+ ++.....+.|||||++|+++ | +|||++|.+. .....|++|+.. .+.|.
T Consensus 158 ~~S~Dl~~W~~~~-~~~~~~~~~~~E~P~l~~~~--g-------------~~~L~~s~~~~~~~~~Y~~~~~~--~g~~~ 219 (280)
T cd08995 158 FTSKDLKNWEYEE-PFYAPGLYFMPECPDLFKMG--D-------------WWYLVYSEFSENRKTHYRVSKSP--FGPWR 219 (280)
T ss_pred EEeCCcCcceecC-ceecCCCcceeecceEEEEC--C-------------EEEEEEEeccCCCcEEEEEeCCC--CCCeE
Confidence 9999999999986 45444456799999999997 5 9999999763 356789999622 24564
Q ss_pred cCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEEEecCCC
Q 008189 291 PDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGK 360 (574)
Q Consensus 291 ~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~g~ 360 (574)
... ...+| |+ |||||+|.++ |||||||||++++...++.+.+|+|||| ||||.+.+||.
T Consensus 220 ~~~-------~~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~~g~ 279 (280)
T cd08995 220 APD-------DDTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNEDGT 279 (280)
T ss_pred cCC-------cCccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECCCCc
Confidence 322 23589 99 9999999985 9999999999998877777899999998 78888887773
No 8
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=100.00 E-value=1.2e-37 Score=316.72 Aligned_cols=243 Identities=27% Similarity=0.362 Sum_probs=192.2
Q ss_pred cee-eeEEECCEEEEEEeeCCCCCCCC-ccEEEEeecCCcCCceeccccc--CCCCCccCCCeEeeeEEEcCCCeeEEEE
Q 008189 59 WIN-GPMYYKGIYHLFYQYNPKGAVWG-NIVWAHSVSKDLINWEALEPAL--YPSKPFDINGCWSGSATVLPGNKPIILY 134 (574)
Q Consensus 59 w~N-g~~~~~G~yHlfyq~~P~~~~~g-~~~Wgha~S~Dlv~W~~~~~al--~P~~~~D~~gv~SGsav~~~dg~~~l~Y 134 (574)
..| +.+. |+||||||++|.+..++ ..+|+||+|+||+||++.+.+| .|...+|..+||+|+++...+|+++|||
T Consensus 6 ~~~~~~~~--g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Y 83 (276)
T cd08979 6 VFNPAVVV--GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFY 83 (276)
T ss_pred ccCCceEe--eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEE
Confidence 345 4444 99999999999987643 5568999999999999999887 5667788899999999986449999999
Q ss_pred eeecC--CCcceEEEEEecCCCCcccceeeccCCCceE-----ecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCe
Q 008189 135 TGVDH--KERQVQNYAVPANPSDPYLRKWIKPDNNPVV-----FPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHR 206 (574)
Q Consensus 135 Tg~~~--~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi-----~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~ 206 (574)
|+... ...+.+++|+|+|+ ++|+|...+|++ ..+.......+|||+|++.+.+|+|+|++++.. +..
T Consensus 84 t~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~ 158 (276)
T cd08979 84 TGYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADER 158 (276)
T ss_pred ecccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCC
Confidence 99863 45688999999985 799998666653 222333457899999776633499999999875 345
Q ss_pred eEEEEEEeCCCCCCEEccccc--ccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC-CceeEEEEEEEe
Q 008189 207 GMAYLYRSRDFMKWTKAKHPI--HSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL-TRYDYYTIGTYN 283 (574)
Q Consensus 207 G~i~ly~S~Dl~~W~~~~~~l--~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~-~~~~~Y~vG~~d 283 (574)
++|.+|+|+||.+|++.+.+. .......++|||++|+++ | +|||+++... ...+.|.+|.++
T Consensus 159 ~~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~--g-------------~~~l~~~~~~~~~~~~y~vg~~~ 223 (276)
T cd08979 159 GAIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID--G-------------RWYLLYSGRNEDAKTGYRVGTAL 223 (276)
T ss_pred cEEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC--C-------------EEEEEEEecCccCCccEEEEecc
Confidence 789999999999999987531 222345799999999997 5 8999999764 456899999977
Q ss_pred CCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCC
Q 008189 284 RDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANES 332 (574)
Q Consensus 284 ~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~ 332 (574)
.. .|.|.. ...+|.|+ |||+|++.+..++|++++|||+++
T Consensus 224 ~~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 224 FG--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred cC--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 53 565532 35689999 999999987546999999999987
No 9
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=100.00 E-value=7.1e-34 Score=289.40 Aligned_cols=265 Identities=28% Similarity=0.400 Sum_probs=201.9
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccC----CCCCccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALY----PSKPFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~----P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
.+++++|+||||||++|.+ +.++|+|++|+||+||++++.++. |...++..++|+|+++...+|+++||||+.
T Consensus 4 ~i~~~~g~yyl~~~~~~~~---~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~yt~~ 80 (286)
T cd08772 4 NLIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLYYTDV 80 (286)
T ss_pred eEEEECCEEEEEEEccCCC---CCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEEEEee
Confidence 3678999999999999875 678999999999999999998884 667777889999999986449999999998
Q ss_pred cC-CCcceEEEEEecCCCCcccceeeccCCCceEec-CCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEEEEEe
Q 008189 138 DH-KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFP-GPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHRGMAYLYRS 214 (574)
Q Consensus 138 ~~-~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~-~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~G~i~ly~S 214 (574)
.. ...+.+++|+|+|.. ..|++...+||+.. +.......+|||+|++. ++|+|||++++.. +..+.|.+++|
T Consensus 81 ~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d-~dG~~y~~~~~~~~~~~~~i~~~~s 155 (286)
T cd08772 81 SFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVFED-DDGKWYLVFGSGDHHNFGGIFLYES 155 (286)
T ss_pred cCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEEEc-CCCCEEEEEccccCCCCCeEEEEEc
Confidence 53 356789999998864 45666545566542 22234568999996544 5699999999764 23567999999
Q ss_pred CCCCCCEEcccc-c-ccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC------CceeEEEEEEEeCCC
Q 008189 215 RDFMKWTKAKHP-I-HSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL------TRYDYYTIGTYNRDK 286 (574)
Q Consensus 215 ~Dl~~W~~~~~~-l-~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~------~~~~~Y~vG~~d~~~ 286 (574)
+|+.+|...+.+ + .......++|||++|+++ | +|+|++|... .....|++++.+ .
T Consensus 156 ~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~--g-------------~~yL~~s~~~~~~~~~~y~~~~~~~~~~--~ 218 (286)
T cd08772 156 DDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN--G-------------KYYLFYSINGTGRVDSTYSIGYARSESD--T 218 (286)
T ss_pred CCCCCcccccceeeEeeccCCCceeccEEEEEC--C-------------EEEEEEEcCCCcCCCCCcceEEEEccCC--C
Confidence 999999876643 1 223346799999999997 5 8999999754 345678888743 3
Q ss_pred CccccCCCCCC-CCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEE
Q 008189 287 DRYVPDKDSVD-GWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREV 353 (574)
Q Consensus 287 ~~F~~~~~~~d-~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPReL 353 (574)
++|.+.....- .......|.+. +||+++|.++ +||++|++|+.+++.... ...+|+++|+|||+|
T Consensus 219 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~ 285 (286)
T cd08772 219 GPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLL 285 (286)
T ss_pred CCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCcccccccccc
Confidence 56765432100 00123456777 9999999986 799999999999876433 567999999999987
No 10
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.94 E-value=6e-25 Score=228.62 Aligned_cols=263 Identities=17% Similarity=0.207 Sum_probs=168.1
Q ss_pred EEECCEEEEEEeeCCCC----CCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 64 MYYKGIYHLFYQYNPKG----AVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 64 ~~~~G~yHlfyq~~P~~----~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
+-++|..-+|++..|.. +.|+.+||||++|+||+||++.+ ++.|+..+|.+|||||||++..+|+++|||||+.+
T Consensus 15 ~~~~G~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~-~l~p~~~~d~~g~wSGsa~~~~dg~~~lfYTg~~~ 93 (349)
T cd08997 15 ASYNGYEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGG-KVFPDGLSPGSREWSGSATLDDDGTVQLFYTAVGR 93 (349)
T ss_pred EEECCEEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCC-ccCCCCcccCCCeEcceEEEeCCCeEEEEEecccc
Confidence 44677433999887764 46899999999999999999955 46688889999999999998667999999999853
Q ss_pred ----CCcceEEEEEecCCCC-cccceeeccCCCceEecC--------------CCCCCcCccCCeeEEecCCCeEEEEEe
Q 008189 140 ----KERQVQNYAVPANPSD-PYLRKWIKPDNNPVVFPG--------------PDVNASAFRDPTTAWWSNDGHWRMLVG 200 (574)
Q Consensus 140 ----~~~~~q~lA~s~D~~d-~~l~~w~k~~~~Pvi~~~--------------~~~~~~~fRDP~Vvw~~~~g~~~M~~g 200 (574)
.+...|++|.+++... --+..|.+. .+++.++ +.....+||||+|+..+++|+|||+++
T Consensus 94 ~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~--~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G~~ymvfe 171 (349)
T cd08997 94 KGEPQPTFTQRLALARGTLSVVNLSGFEDH--HELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETGKTYLLFE 171 (349)
T ss_pred CCCCCCCceEEEEEEECCCcceEecccCcc--ceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCCcEEEEEE
Confidence 2457788887765420 001233322 2444321 112357899999755434799999999
Q ss_pred eecC-C---------------------------eeEEEEE--EeCCCCCCEEcccccccCC-CCCccccceeEEeccCCC
Q 008189 201 SRRK-H---------------------------RGMAYLY--RSRDFMKWTKAKHPIHSLA-NTGMWECPDFYPVSISGK 249 (574)
Q Consensus 201 ~~~~-~---------------------------~G~i~ly--~S~Dl~~W~~~~~~l~~~~-~~~~wEcPdlf~l~~~g~ 249 (574)
+... . .|+|.++ +|+||.+|++.+ ||.... -...||||++|+++ |
T Consensus 172 ant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~-PL~~a~~v~d~~E~P~v~~~~--g- 247 (349)
T cd08997 172 GNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLP-PLLEANGVNDELERPHVVFHN--G- 247 (349)
T ss_pred eccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcC-ccccCCCcCCceEcceEEEEC--C-
Confidence 8752 2 3666666 677999999986 555432 24579999999997 6
Q ss_pred CccccccCCCCceEEEEEeecCC---------ceeEEEEEE-EeCCCCccccCCCCCCCCcceeccc--CCCccceeeee
Q 008189 250 NGLDTSFAGGNEKFVLKVSLDLT---------RYDYYTIGT-YNRDKDRYVPDKDSVDGWRGLRYDY--GNFYASKTFFD 317 (574)
Q Consensus 250 ~~~~~~~~~~~~k~vl~~s~~~~---------~~~~Y~vG~-~d~~~~~F~~~~~~~d~~~~~~lD~--G~fYA~~t~~~ 317 (574)
||+|++|.... ...++++++ +. +.|.|-+.. ...+-- -.-|.+++..-
T Consensus 248 ------------k~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~---GP~~~~n~s-----glvl~~p~~~~~~~ys~~~ 307 (349)
T cd08997 248 ------------KYYLFTISHRSTFAPGLSGPDGLYGFVSDSLR---GPYKPLNGS-----GLVLGNPTDAPFQTYSWYV 307 (349)
T ss_pred ------------EEEEEEeCCcCccccccCCCCcEEEEEeCCCC---CCCccCCCC-----cceeCCCCCCccccceEEE
Confidence 99999885332 134555664 33 466654321 011100 01233444433
Q ss_pred CCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEEEec
Q 008189 318 SRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDG 357 (574)
Q Consensus 318 ~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~ 357 (574)
.+ .-++...|.+..... ......|.++-.=.|.|+.
T Consensus 308 ~p--~~lv~Sfid~~~~~~--~~~~~~gT~aPt~~l~~~g 343 (349)
T cd08997 308 MP--NGLVTSFIDNVGFAD--GGSRFGGTLAPTLKLNLKG 343 (349)
T ss_pred EC--CCEEEEEecccCCcc--cccccCCeeCCeEEEEEcC
Confidence 33 335556677765322 1234566666444555543
No 11
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.88 E-value=1.2e-21 Score=201.74 Aligned_cols=187 Identities=20% Similarity=0.301 Sum_probs=137.2
Q ss_pred ceeecCCCcee--eeEEE-CCEEEEEEeeCCCCCC---C-CccEEEEeecCCcC-CceecccccCCC--CCccCCCeEee
Q 008189 51 FHFQPPKHWIN--GPMYY-KGIYHLFYQYNPKGAV---W-GNIVWAHSVSKDLI-NWEALEPALYPS--KPFDINGCWSG 120 (574)
Q Consensus 51 ~H~~p~~gw~N--g~~~~-~G~yHlfyq~~P~~~~---~-g~~~Wgha~S~Dlv-~W~~~~~al~P~--~~~D~~gv~SG 120 (574)
.+|..+..++. .++.. +|+||||||..|.+.. | ....||||+|+|+. +|+..+++|.|+ ..||..+++++
T Consensus 4 ~~~~~~~~~~w~~~vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~P 83 (291)
T cd08994 4 SGLEDEDYSVWGGSIIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHNP 83 (291)
T ss_pred ceeeeCCeEEEecceEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccCC
Confidence 45677777777 55554 4799999999887643 2 23569999999987 899999999887 46888999999
Q ss_pred eEEEcCCCeeEEEEeeecC-------CCcceEEEEEecCCCCcccceeeccCCCceEec-C-----------------C-
Q 008189 121 SATVLPGNKPIILYTGVDH-------KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFP-G-----------------P- 174 (574)
Q Consensus 121 sav~~~dg~~~l~YTg~~~-------~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~-~-----------------~- 174 (574)
+++.. +|+++||||+... ...+.+++|+|++.. .+|++. .+||+.+ + .
T Consensus 84 ~vi~~-~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~----g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~g 157 (291)
T cd08994 84 TIKRF-DGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLD----GPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPDG 157 (291)
T ss_pred eEEEE-CCEEEEEEEcccCCcccccCCCCceEEEEEeCCCC----CCcEEC-CCceecCCCCccccccccCCCeEEeCCC
Confidence 99874 8999999999753 234667788887632 356664 3455421 0 0
Q ss_pred ------------------------------------------CCCCcCccCCeeEEecCCCeEEEEEeeecC----CeeE
Q 008189 175 ------------------------------------------DVNASAFRDPTTAWWSNDGHWRMLVGSRRK----HRGM 208 (574)
Q Consensus 175 ------------------------------------------~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~----~~G~ 208 (574)
......+|||+| |+ .+|+|||+++++.+ ..++
T Consensus 158 ~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~V-~~-~~g~yym~~~~~~~~~~~~~~~ 235 (291)
T cd08994 158 SYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPFV-WY-DKGQFHMIVKDMLGYVTGEKGG 235 (291)
T ss_pred CEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCceE-EE-eCCEEEEEEeecccCcCCCCce
Confidence 001245789995 66 46999999998753 4678
Q ss_pred EEEEEeCCCCCCEEcccccc----c--C---CCCCccccceeE-Eec
Q 008189 209 AYLYRSRDFMKWTKAKHPIH----S--L---ANTGMWECPDFY-PVS 245 (574)
Q Consensus 209 i~ly~S~Dl~~W~~~~~~l~----~--~---~~~~~wEcPdlf-~l~ 245 (574)
+.+|+|+|+.+|++.+.++. . . ....+||||+++ +.+
T Consensus 236 i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 236 GAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred EEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 99999999999999875532 1 1 135799999999 776
No 12
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.81 E-value=7.8e-19 Score=178.89 Aligned_cols=146 Identities=18% Similarity=0.249 Sum_probs=114.4
Q ss_pred e-eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecc-cccCC--CCCccCCCeEeeeEEEcCCCeeEEEEee
Q 008189 61 N-GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALE-PALYP--SKPFDINGCWSGSATVLPGNKPIILYTG 136 (574)
Q Consensus 61 N-g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~-~al~P--~~~~D~~gv~SGsav~~~dg~~~l~YTg 136 (574)
| ++++++|+||||||.++.. +.++||||+|+|++||++.+ +.|.| +..++..+|++++++. .+|+++|+||+
T Consensus 2 nP~v~~~~G~y~l~y~~~~~~---~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Yta 77 (268)
T cd08993 2 NPAVVYDNGEFYLLYRAAGND---GVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITYAA 77 (268)
T ss_pred cCeEEEECCEEEEEEEEECCC---CceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEEEc
Confidence 6 7899999999999987643 57899999999999999875 34556 5677889999999987 59999999999
Q ss_pred ecC-CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEec-CCCeEEEEEeeec---CCeeEEEE
Q 008189 137 VDH-KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWS-NDGHWRMLVGSRR---KHRGMAYL 211 (574)
Q Consensus 137 ~~~-~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~-~~g~~~M~~g~~~---~~~G~i~l 211 (574)
... ...+++++|.|+|+ ++|+|.. . ++. ...||+++ |.+ .+|+|+|++.... +..+.|.+
T Consensus 78 ~~~~~~~~~i~lA~S~D~-----~~W~~~~-~-~~~-------~~~~d~~~-~p~~~~g~y~m~~r~~~~~~~~~~~I~l 142 (268)
T cd08993 78 RPNAPNGTRIGLATTKDF-----ITFERLG-T-SLV-------PNNRDGIL-FPEKINGKYVMLHRPFEYGGTSPPDMWL 142 (268)
T ss_pred cCCCCCCcEEEEEEeCCc-----ceEEEec-c-cCC-------CCCCCEEE-eeEEECCEEEEEEccccCCCCCCCcEEE
Confidence 763 34578999999885 8999973 2 111 12478884 432 4899999996442 24568999
Q ss_pred EEeCCCCCCEEccc
Q 008189 212 YRSRDFMKWTKAKH 225 (574)
Q Consensus 212 y~S~Dl~~W~~~~~ 225 (574)
++|+||.+|+..+.
T Consensus 143 A~S~Dl~~W~~~~~ 156 (268)
T cd08993 143 SFSPDLVHWGNHRF 156 (268)
T ss_pred EECCCcCccCCCeE
Confidence 99999999987653
No 13
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.80 E-value=1.7e-18 Score=178.82 Aligned_cols=158 Identities=17% Similarity=0.278 Sum_probs=121.7
Q ss_pred eeEEECCEEEEEEeeCCCCC--CCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPKGA--VWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~--~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
-+++++|+||||||++|..+ .++.++|+||+|+||++|++.++++.+ ..++++++++.+.+|+++||||+..
T Consensus 83 ~v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~~~-----~~~~iD~~vf~~~dg~~yl~y~~~~- 156 (294)
T cd08984 83 EVVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVDLD-----SDRVIDACVFKLPDGRWRMWYKDER- 156 (294)
T ss_pred eEEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCccccC-----CCCcEEeEEEEeCCCEEEEEEECCC-
Confidence 57889999999999998753 346789999999999999998876322 3578999999866799999999853
Q ss_pred CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCC
Q 008189 140 KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMK 219 (574)
Q Consensus 140 ~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~ 219 (574)
....+++|.|+|. .+|++. .+++.. ...++|+| |+ .+|+|||+++. ..| +.+|+|+|+.+
T Consensus 157 -~~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v-~k-~~g~yym~~~~---~~g-~~~~~S~D~~~ 216 (294)
T cd08984 157 -RGSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV-FR-WKGYYWMIIDE---WKG-LGVYRSKDAEN 216 (294)
T ss_pred -CCeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe-eE-ECCEEEEEEcC---Cce-EEEEECCChhh
Confidence 2345688998885 799985 466642 23489996 45 47999999854 234 67999999999
Q ss_pred CEEcccccccC----CCCCccccceeEEec
Q 008189 220 WTKAKHPIHSL----ANTGMWECPDFYPVS 245 (574)
Q Consensus 220 W~~~~~~l~~~----~~~~~wEcPdlf~l~ 245 (574)
|++.+.++... ....+++||++++.+
T Consensus 217 W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 217 WERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred cEECCeeeccCCCCccccccccCCcEEEeC
Confidence 99988665432 124467999999876
No 14
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.77 E-value=1.8e-17 Score=169.49 Aligned_cols=188 Identities=16% Similarity=0.230 Sum_probs=136.2
Q ss_pred Ccee--eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCC-CCccCCCeEeeeEEEcCCCeeEEEE
Q 008189 58 HWIN--GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPS-KPFDINGCWSGSATVLPGNKPIILY 134 (574)
Q Consensus 58 gw~N--g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~-~~~D~~gv~SGsav~~~dg~~~l~Y 134 (574)
||+. .+++++|+||||++..+.+. ...+|.+++|+||+||+.++.+|.+. ..++..++|+++++.. +|+++|||
T Consensus 6 g~~~DP~i~~~~g~yY~~~t~~~~~~--~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~~-~g~yy~yy 82 (275)
T cd09004 6 GWYADPEIRIFGGTYYIYPTSDGAGG--EQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIER-NGKYYFYF 82 (275)
T ss_pred CCCCCCCeEEECCEEEEEEeccCCCC--CeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEEE-CCEEEEEE
Confidence 4555 67889999999998765432 25679999999999999999998764 4566789999999874 89999999
Q ss_pred eeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEE-EE
Q 008189 135 TGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYL-YR 213 (574)
Q Consensus 135 Tg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~l-y~ 213 (574)
|+. +.+++|+|++.. -.|++..++|++.... .....+||.|+ .+.+|+|||++++. +.+.+ -.
T Consensus 83 s~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~----~~~~i~~l 146 (275)
T cd09004 83 SAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDVF-IDDDGQAYLYWGGW----GHCNVAKL 146 (275)
T ss_pred EcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCeE-ECCCCCEEEEEcCc----CCEEEEEE
Confidence 986 367899998864 4688744678875432 12568999965 44689999999864 12333 34
Q ss_pred eCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEEEEE
Q 008189 214 SRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIG 280 (574)
Q Consensus 214 S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG 280 (574)
|+|+.+|......+ ......+.|||.+|+.+ | +++|++|........|.+|
T Consensus 147 ~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~--G-------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 147 NEDMISFDGERDGS-EITPKNYFEGPFMFKRN--G-------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred CCCcccccCcceee-eccCCCceecceEEEEC--C-------------EEEEEEECCCCCCCCceEE
Confidence 78898886443221 12234589999999987 5 8999998754332344444
No 15
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.73 E-value=2.5e-16 Score=161.55 Aligned_cols=189 Identities=19% Similarity=0.200 Sum_probs=131.9
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCC-ccCCCeEeeeEEEcCCCeeEEEEeeecCC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKP-FDINGCWSGSATVLPGNKPIILYTGVDHK 140 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~-~D~~gv~SGsav~~~dg~~~l~YTg~~~~ 140 (574)
.+++++|+|+||+..... .+|++++|+||+||+.++.+|.+... ++..++|.++++. .+|+++|+|++....
T Consensus 12 ~i~~~~g~yy~~~t~~~~------~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~~y~~~~~~ 84 (287)
T cd08999 12 SVIRVDGTYYAYATNGNG------PNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVLYYSARDKG 84 (287)
T ss_pred eEEEECCEEEEEEeCCCC------CcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEEEEEeecCC
Confidence 577889999999986532 57999999999999999988877655 4457789998877 489999999998652
Q ss_pred -CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCee---EEEEE-EeC
Q 008189 141 -ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRG---MAYLY-RSR 215 (574)
Q Consensus 141 -~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G---~i~ly-~S~ 215 (574)
..+.+++|+|+|.. ..|++.. .+++..+. .....+||.|+ .+++|+|||++++.....+ .+.+. .|+
T Consensus 85 ~~~~~i~~a~s~~p~----g~~~~~~-~~~~~~~~--~~~~~~Dp~v~-~d~dG~~Yl~~~~~~~~~~~~~~i~~~~ls~ 156 (287)
T cd08999 85 SGGQCIGVATADSPL----GPFTDHG-KPPLCCPE--GEGGAIDPSFF-TDTDGKRYLVWKSDGNSIGKPTPIYLQELSA 156 (287)
T ss_pred CCCEEEEEEECCCCC----CCCccCC-cceEecCC--CCCCccCCCeE-ECCCCCEEEEEeccCCCCCCCceEEEEEeCC
Confidence 45567789987753 4688763 34443222 12567999965 4468999999987542211 24443 378
Q ss_pred CCCCCEEcccccccC---CCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCce--eEEEEE
Q 008189 216 DFMKWTKAKHPIHSL---ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRY--DYYTIG 280 (574)
Q Consensus 216 Dl~~W~~~~~~l~~~---~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~--~~Y~vG 280 (574)
|+.+|......+... ....++|||.+|+.+ | +|+|++|...... ..|.+|
T Consensus 157 d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~~S~~~~~~~~~~y~i~ 211 (287)
T cd08999 157 DGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG--G-------------YYYLFYSAGGCCSGASTYAVG 211 (287)
T ss_pred CCccccCCcEeeecccccccCCceEeeEEEEEC--C-------------EEEEEEEcCCccCCCCCEEEE
Confidence 988886433222211 134589999999986 5 8999998753211 145555
No 16
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=99.69 E-value=1.9e-15 Score=154.41 Aligned_cols=193 Identities=15% Similarity=0.167 Sum_probs=137.8
Q ss_pred eEEECCEEEEEEeeCCCCCC---CCccEEEEeecCCcCCceecccccCCCC--CccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 63 PMYYKGIYHLFYQYNPKGAV---WGNIVWAHSVSKDLINWEALEPALYPSK--PFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 63 ~~~~~G~yHlfyq~~P~~~~---~g~~~Wgha~S~Dlv~W~~~~~al~P~~--~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
+++++|+||||.......+. .....|..++|+||+||+.++.+|.+.. .++..++|.++++. .+|+++|||++.
T Consensus 5 ~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~yy~~~ 83 (274)
T cd08990 5 AHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYLYFPAR 83 (274)
T ss_pred cEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEEEEEee
Confidence 57789999999987655432 2344699999999999999999987543 36778999999987 589999999997
Q ss_pred cCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCC
Q 008189 138 DHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDF 217 (574)
Q Consensus 138 ~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl 217 (574)
.....+.+++|+|+|.. -.|++....|++.... ......||.++ .+.+|++||+++.. .+......|+|+
T Consensus 84 ~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~~~~l~~d~ 153 (274)
T cd08990 84 DKDGGFAIGVAVSDSPA----GPFKDAGGPILITTPS--GGWYSIDPAVF-IDDDGQAYLYWGGG---LGLRVAKLKPDM 153 (274)
T ss_pred cCCCceEEEEEEeCCCC----CCCCCCCCccccccCC--CCCCccCCcEE-ECCCCCEEEEECCc---CCEEEEEeCccc
Confidence 54345677899998753 4688764445554211 23567899965 44689999999865 222333457899
Q ss_pred CCCEEccccccc-----CCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEEEEEE
Q 008189 218 MKWTKAKHPIHS-----LANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGT 281 (574)
Q Consensus 218 ~~W~~~~~~l~~-----~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 281 (574)
.+|+.....+.. .......|+|.+++.+ | +++|++|.+......|.+.+
T Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYl~yS~~~~~~~~~a~s~ 207 (274)
T cd08990 154 LSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN--G-------------TYYLSYSTGDPEEIAYATSD 207 (274)
T ss_pred cccCCCcEEEEeccccCCCCCCcccceeEEEEC--C-------------EEEEEEECCCCcEEEEEEcC
Confidence 999754332321 1224568999999987 6 89999998655556666553
No 17
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=99.61 E-value=3.5e-14 Score=143.72 Aligned_cols=189 Identities=22% Similarity=0.227 Sum_probs=129.3
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccC----CCCCccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALY----PSKPFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~----P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
.+++++|+||||+..... ....+..++|+||++|+.++.++. +....+..++|.++++.. +|+++|+|++.
T Consensus 4 ~v~~~~~~yyl~~t~~~~----~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~~-~g~yyl~y~~~ 78 (271)
T cd08978 4 YILRYNGKYYLYGSTDDA----AGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIYY-EGKYYLYYSVS 78 (271)
T ss_pred cEEEECCEEEEEEecCCc----CCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEEE-CCEEEEEEEcc
Confidence 367889999999987643 234689999999999999998875 344455678999999874 79999999997
Q ss_pred cC-CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC--CeeEEEEEEe
Q 008189 138 DH-KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK--HRGMAYLYRS 214 (574)
Q Consensus 138 ~~-~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~--~~G~i~ly~S 214 (574)
.. ...+.+++|+|+|. ..|.+....+. .. ......+||.|+.. ++|++||+++.... ..+.|.++++
T Consensus 79 ~~~~~~~~i~~a~s~d~-----~g~~~~~~~~~---~~-~~~~~~iDp~vf~d-~dg~~yl~~~~~~~~~~~~~i~~~~l 148 (271)
T cd08978 79 DFDYNGSGIGVATSEDP-----TGPFEDKVIRP---PT-SNNGNSIDPTVFKD-DDGKYYLYYGSGDPGAGFGGIYISEL 148 (271)
T ss_pred cCCCCcccEEEEECCCC-----CCCccccccCc---Cc-cCCCCccCcceEEc-CCCCEEEEEecccCCCCCCcEEEEEE
Confidence 53 23467889999886 45554321111 11 12356789996544 67999999987642 2456888888
Q ss_pred CCCCCCEEccccc---ccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEEEEEE
Q 008189 215 RDFMKWTKAKHPI---HSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGT 281 (574)
Q Consensus 215 ~Dl~~W~~~~~~l---~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 281 (574)
++...|.. +.+. .......+.|+|.+|+.+ | +|+|++|........|.++-
T Consensus 149 ~~~~~~~~-~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~~~~~~y~~~~ 202 (271)
T cd08978 149 TDDLTKPT-GPPVLSASSGNNNAVTEGPTIFKKN--G-------------YYYLTYSANGTGDYGYNIGY 202 (271)
T ss_pred Cccccccc-CCceeeeeeccCCCceEccEEEEEC--C-------------EEEEEEEeCCCCCCCceEEE
Confidence 77555432 2221 112234589999999987 5 89999987543233455553
No 18
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.58 E-value=1.3e-13 Score=142.30 Aligned_cols=177 Identities=16% Similarity=0.177 Sum_probs=123.5
Q ss_pred eEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCC-CccCCCeEeeeEEEcCCCeeEEEEeeecCC-
Q 008189 63 PMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSK-PFDINGCWSGSATVLPGNKPIILYTGVDHK- 140 (574)
Q Consensus 63 ~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~-~~D~~gv~SGsav~~~dg~~~l~YTg~~~~- 140 (574)
+++++|+|+||+..... ...+.+++|+||++|+.++.++.+.. .++..++|.++++. .+|+++|||++....
T Consensus 5 v~~~~g~yyl~~t~~~~-----~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~~~~~~ 78 (294)
T cd08991 5 VLRYNGKYYAYGTGGAD-----GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSANDRDE 78 (294)
T ss_pred EEEECCEEEEEEeCCCC-----CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEeccCCC
Confidence 57789999999876543 23588999999999999998887654 37778999999987 489999999997543
Q ss_pred CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC---eeEEEEEEeCCC
Q 008189 141 ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKH---RGMAYLYRSRDF 217 (574)
Q Consensus 141 ~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~---~G~i~ly~S~Dl 217 (574)
..+.+++|+|+|.. -.|++... +.+.. .....||.++.. .+|+|||+++..... .+....--|.|+
T Consensus 79 ~~~~i~~a~s~~p~----gp~~~~~~-~~~~~-----~~~~iD~~vf~d-~dG~~yl~~~~~~~~~~~~~i~~~~l~~d~ 147 (294)
T cd08991 79 KTEHIGVAVSDSPL----GPFRDIKK-PPIDF-----EPKSIDAHPFID-DDGKPYLYYSRNNYGNRVSDIYGTELVDDK 147 (294)
T ss_pred CcceEEEEEeCCCC----CCCCcCCC-CcccC-----CCcccCCceEEC-CCCCEEEEEEecCCCCcccceEEEEEccce
Confidence 45678899998753 46776432 22221 134679996544 679999999865321 233344457888
Q ss_pred CCCEEccc----ccccC--------------CCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 218 MKWTKAKH----PIHSL--------------ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 218 ~~W~~~~~----~l~~~--------------~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
.+|..... ++..+ ....+.|+|.+++.+ | +|+|++|...
T Consensus 148 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~ 204 (294)
T cd08991 148 LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN--G-------------RYYLTYSANH 204 (294)
T ss_pred eeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC--C-------------EEEEEEECCC
Confidence 77752110 11110 123478999999997 5 8999998643
No 19
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.56 E-value=1.4e-13 Score=143.57 Aligned_cols=167 Identities=16% Similarity=0.248 Sum_probs=119.2
Q ss_pred ccceeecCCCcee----eeEEECCEEEEEEeeCCC-----------CC--CCCccEEEEeecCCcCCceecccccCCC--
Q 008189 49 TAFHFQPPKHWIN----GPMYYKGIYHLFYQYNPK-----------GA--VWGNIVWAHSVSKDLINWEALEPALYPS-- 109 (574)
Q Consensus 49 P~~H~~p~~gw~N----g~~~~~G~yHlfyq~~P~-----------~~--~~g~~~Wgha~S~Dlv~W~~~~~al~P~-- 109 (574)
|..-+.+..+... .+++.+|+|||||++... .+ .|....++||+|+||+||++++.+|.+.
T Consensus 25 p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~~ 104 (349)
T cd08992 25 PKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGEK 104 (349)
T ss_pred cccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCCC
Confidence 3444444444443 266789999999996532 11 2456789999999999999999888754
Q ss_pred CCccCCCeEeeeEEEcCCCeeEEEEeeecCC----CcceEEEEEecCCCCcccceeeccCCCceEecCC-----------
Q 008189 110 KPFDINGCWSGSATVLPGNKPIILYTGVDHK----ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGP----------- 174 (574)
Q Consensus 110 ~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~----------- 174 (574)
..||..++|.++++. .+|+++|||++.... ..+.+++|+|++.. ..|++. .+||+.+..
T Consensus 105 g~Wd~~~vwaP~Vi~-~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~~ 178 (349)
T cd08992 105 GAYDDRSVFTPEVLE-HEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDNR 178 (349)
T ss_pred CCccccceECcEEEE-ECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCce
Confidence 358999999999986 599999999986431 23567899998763 359886 689985421
Q ss_pred -------CCCCcCccCCeeEEecCCCeEEEEEeeecC--------CeeEEEEEEeCCCC-CCEEc
Q 008189 175 -------DVNASAFRDPTTAWWSNDGHWRMLVGSRRK--------HRGMAYLYRSRDFM-KWTKA 223 (574)
Q Consensus 175 -------~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~--------~~G~i~ly~S~Dl~-~W~~~ 223 (574)
.++...+.||.|+ + .+|+|||++.+... ..-++.++.|++.. -|+..
T Consensus 179 ~~~~~~g~wD~~~v~~P~v~-~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~ 241 (349)
T cd08992 179 FLVKKKGSFDSHKVHDPCLF-P-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKS 241 (349)
T ss_pred eEeccCCCcccCceECCEEE-E-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeC
Confidence 1455667899965 4 48999999966431 12368899998875 57654
No 20
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.53 E-value=6.9e-13 Score=136.55 Aligned_cols=174 Identities=22% Similarity=0.243 Sum_probs=119.8
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCC-------ccCCCeEeeeEEEcCCCeeEEEE
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKP-------FDINGCWSGSATVLPGNKPIILY 134 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~-------~D~~gv~SGsav~~~dg~~~l~Y 134 (574)
.+++++|+||||+... ++++++|+||+||++++.++.+... .+..++|.++++.. +|+++|||
T Consensus 5 ~v~~~~~~yyl~~t~~---------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~~-~g~yyl~y 74 (288)
T cd08998 5 SIIKEGDTYYLFSTGN---------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIYL-NGKYYLYY 74 (288)
T ss_pred eEEEECCEEEEEEcCC---------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEEE-CCEEEEEE
Confidence 4678999999999864 5999999999999999988865432 34578999999874 99999999
Q ss_pred eeecCC-CcceEEEEEecCC-CCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEE
Q 008189 135 TGVDHK-ERQVQNYAVPANP-SDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLY 212 (574)
Q Consensus 135 Tg~~~~-~~~~q~lA~s~D~-~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly 212 (574)
++.... ....+++|+|++. . ..|++. +||+....+......+||.++.. ++|++||++++... | +.+.
T Consensus 75 s~~~~~~~~~~i~va~s~~~~~----gpw~~~--~~v~~~~~~~~~~~~iDp~vf~d-~dG~~Yl~~~~~~~--~-i~~~ 144 (288)
T cd08998 75 SVSTFGSNRSAIGLATSDTLPD----GPWTDH--GIVIESGPGRDDPNAIDPNVFYD-EDGKLWLSFGSFWG--G-IFLV 144 (288)
T ss_pred EEEeCCCCceEEEEEEeCCCCC----CCCEEc--ceeeecCCCCCCcccccCCEEEc-CCCCEEEEeeeccC--C-EEEE
Confidence 987543 3456788999875 2 479874 58886443222346789996544 68999999986431 2 3333
Q ss_pred E-eCC---CCCCEEcccccccCC-CCCccccceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 213 R-SRD---FMKWTKAKHPIHSLA-NTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 213 ~-S~D---l~~W~~~~~~l~~~~-~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
+ +.| ...|......+.... .....|-|.+|+-+ | +++|++|..
T Consensus 145 ~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~--g-------------~YYl~~S~~ 192 (288)
T cd08998 145 ELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG--G-------------YYYLFVSYG 192 (288)
T ss_pred EeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC--C-------------EEEEEEEcc
Confidence 3 222 123321111121111 23468999999987 5 899988864
No 21
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.49 E-value=1.5e-12 Score=134.64 Aligned_cols=165 Identities=18% Similarity=0.217 Sum_probs=115.5
Q ss_pred eeEEE--CCEEEEEEee-CCCC----CCCC-ccEEEEeecCC-cCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEE
Q 008189 62 GPMYY--KGIYHLFYQY-NPKG----AVWG-NIVWAHSVSKD-LINWEALEPALYPSKPFDINGCWSGSATVLPGNKPII 132 (574)
Q Consensus 62 g~~~~--~G~yHlfyq~-~P~~----~~~g-~~~Wgha~S~D-lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l 132 (574)
.+++. +|+|||||-. .... ..|. ...+++|+|+| |+||++++.++.++..+....+|.+.++.. +|+++|
T Consensus 15 ~i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~~-~G~y~m 93 (294)
T cd08984 15 TIIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVWH-GGVYHM 93 (294)
T ss_pred EEEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEEE-CCEEEE
Confidence 56776 7899999942 1111 1232 35799999999 999999987766644555677999999874 899999
Q ss_pred EEeeecC-----CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCee
Q 008189 133 LYTGVDH-----KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRG 207 (574)
Q Consensus 133 ~YTg~~~-----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G 207 (574)
||++... ......++|+|+|. .+|++. .++... .....||.|+ ...+|+|+|++..... ..
T Consensus 94 yys~~~~~~~~~~~~~~i~~a~S~Dl-----~~w~~~--~~~~~~-----~~~~iD~~vf-~~~dg~~yl~y~~~~~-~~ 159 (294)
T cd08984 94 YVTYIPGVPPDWGGPRRIVHYTSPNL-----WDWTFV--GRVDLD-----SDRVIDACVF-KLPDGRWRMWYKDERR-GS 159 (294)
T ss_pred EEEecCCCCcccCCCcEEEEEECCCc-----CcceEC--CccccC-----CCCcEEeEEE-EeCCCEEEEEEECCCC-Ce
Confidence 9997632 12346778998874 789875 344211 1345799965 4357999999965322 23
Q ss_pred EEEEEEeCCCCCCEEcccccccCCCCCccccceeEEec
Q 008189 208 MAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 208 ~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~ 245 (574)
.+.+..|+|+.+|+..+. ... ....|.|.+|+.+
T Consensus 160 ~~~~a~s~D~~~w~~~~~-~i~---~~~~EgP~v~k~~ 193 (294)
T cd08984 160 TTYAADSEDLYHWTVEGP-VLG---DRPHEGPNVFRWK 193 (294)
T ss_pred EEEEEECCCCCEEEeCCc-ccc---CCCCCCCCeeEEC
Confidence 467889999999997653 322 2235999999986
No 22
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=99.47 E-value=6e-13 Score=138.31 Aligned_cols=166 Identities=21% Similarity=0.319 Sum_probs=116.3
Q ss_pred CCCcee-eeEEECCE--EEEEEeeCCCCCCCCccEEEEeecCCcCCceecc-cccCCCCCccCCCeEeeeEEEcCCCeeE
Q 008189 56 PKHWIN-GPMYYKGI--YHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALE-PALYPSKPFDINGCWSGSATVLPGNKPI 131 (574)
Q Consensus 56 ~~gw~N-g~~~~~G~--yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~-~al~P~~~~D~~gv~SGsav~~~dg~~~ 131 (574)
+..-+| |++.++|. |||+|...-.. .+..+.|+|.|+|++||+..+ +.|.|+..++..||..++++.. +|+++
T Consensus 29 ~~~vfNpgai~~~~~~R~~l~yr~~~~~--~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~i-~d~yy 105 (312)
T PF04041_consen 29 PNAVFNPGAIVFDGGLRVYLLYRAYGSD--IGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTKI-DDTYY 105 (312)
T ss_dssp SSEEEEEEEEEETTE--EEEEEEEEESS--SSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEEE-TTEEE
T ss_pred cceEEcCcEEEECCeeEEEEEEEeECCC--CceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEEE-CCEEE
Confidence 345678 88878776 89999865322 233489999999999999874 6899999999999999999985 89999
Q ss_pred EEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCC---CCCCcCccCCeeEEecCCCeEEEEEeeecCCeeE
Q 008189 132 ILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGP---DVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGM 208 (574)
Q Consensus 132 l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~---~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~ 208 (574)
|+||+.+. ....+++|+|+|. .+|+|+. +++.... ......-+|-..|-...+|+|+|+.+ .+.
T Consensus 106 mtYta~~~-~~~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r-----~~~ 172 (312)
T PF04041_consen 106 MTYTAYSG-KGPRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR-----DPS 172 (312)
T ss_dssp EEEEEEES-SSEEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE-----SSS
T ss_pred EEEEEecC-CCcccceEEccch-----HhhEEec--cccCcccccccccccccCceEEEEEEECCEEEEEEC-----CCC
Confidence 99999975 3467899999985 8999973 3322111 00011225544322225899999998 346
Q ss_pred EEEEEeCCCCCCEEcccccccCCCCCcccc
Q 008189 209 AYLYRSRDFMKWTKAKHPIHSLANTGMWEC 238 (574)
Q Consensus 209 i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEc 238 (574)
|.+.+|+||++|+....++... ..+.||+
T Consensus 173 i~la~S~Dl~~W~~~~~~~~~~-~~~~~d~ 201 (312)
T PF04041_consen 173 IWLAYSPDLIHWGNHREPLLSP-RPGWWDS 201 (312)
T ss_dssp BEEEEESSSSSEEEEBETSB---STTSSCS
T ss_pred EEEEecCCcccccccccccccC-CCCcChh
Confidence 8999999999998765544432 3456777
No 23
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.46 E-value=6.5e-12 Score=127.94 Aligned_cols=187 Identities=18% Similarity=0.118 Sum_probs=129.1
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCC----CccCCCeEeeeEEEcC-CCeeEEEEee
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSK----PFDINGCWSGSATVLP-GNKPIILYTG 136 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~----~~D~~gv~SGsav~~~-dg~~~l~YTg 136 (574)
++++++|+|++|--....+.. ....|-..+|+||+||+.++.+|.+.. .+...++|.++++..+ +|+++|+|++
T Consensus 7 ~i~~~~~~yY~ygs~~~~~~~-~~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m~~~~ 85 (265)
T cd08985 7 GILKVGGTYYWYGENKGGGDT-AFGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVMWMHI 85 (265)
T ss_pred ceEEECCEEEEEEEecCCCCc-ccccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEEEEEe
Confidence 578899999999877643211 134588999999999999999998764 3445679999998743 5899999998
Q ss_pred ecCC-CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEE-e
Q 008189 137 VDHK-ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYR-S 214 (574)
Q Consensus 137 ~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~-S 214 (574)
.+.. ....+++|+|++.. -.|+... .+. +.+ ...|||.|+++ ++|++||++++..+ ..+.+++ +
T Consensus 86 ~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~~---~~~~Dp~vf~D-dDG~~Yl~~~~~~~--~~i~i~~L~ 151 (265)
T cd08985 86 DSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PLG---YQSRDFGLFVD-DDGTAYLLYSDRDN--SDLYIYRLT 151 (265)
T ss_pred CCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CCC---CCccCCceEEc-CCCCEEEEEecCCC--CceEEEEeC
Confidence 6532 34578899997764 3466431 221 112 45799996554 78999999987532 2355555 4
Q ss_pred CCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC---CceeEEEEEE
Q 008189 215 RDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL---TRYDYYTIGT 281 (574)
Q Consensus 215 ~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~---~~~~~Y~vG~ 281 (574)
+|+..+.. .+.. .......|||.+|+.+ | +|+|++|... .....|++.+
T Consensus 152 ~d~~~~~~--~~~~-~~~~~~~EaP~i~K~~--g-------------~YYL~~S~~t~~~~~~~~y~~s~ 203 (265)
T cd08985 152 DDYLSVTG--EVTT-VFVGAGREAPAIFKRN--G-------------KYYLLTSGLTGWNPNDARYATAT 203 (265)
T ss_pred CCcccccc--eEEE-ccCCCccccceEEEEC--C-------------EEEEEEccCCCccCCceEEEEec
Confidence 67777743 2211 1234578999999997 5 8999998642 2346777775
No 24
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.34 E-value=6.2e-11 Score=122.10 Aligned_cols=172 Identities=21% Similarity=0.225 Sum_probs=114.7
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCC--c----cCCCeEeeeEEEcCCCeeEEEEe
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKP--F----DINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~--~----D~~gv~SGsav~~~dg~~~l~YT 135 (574)
.+++++|+|+||...... ...+..++|+||+||++++.+|.+... + ...++|.+.++.. +|+++|||+
T Consensus 12 ~i~~~~~~yy~~~t~~~~-----~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~g~yy~yy~ 85 (288)
T cd09000 12 SICRVGDDYYLVTSSFEY-----FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRYH-DGTFYLITT 85 (288)
T ss_pred CEEEECCEEEEEECCccc-----CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEEE-CCEEEEEEE
Confidence 578899999998532211 235889999999999999988854321 1 3457999999874 999999999
Q ss_pred eecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC-----CeeEEE
Q 008189 136 GVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK-----HRGMAY 210 (574)
Q Consensus 136 g~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~-----~~G~i~ 210 (574)
+........+++|+|++.. -.|+. |++.. ....||.|++. ++|++||+++.... ..+.|.
T Consensus 86 ~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf~d-~dG~~Y~~~~~~~~~~~~~~~~~i~ 150 (288)
T cd09000 86 NVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLFFD-DDGKVYLVGNGWDERRGYNGHGGIW 150 (288)
T ss_pred ecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCceeEc-CCCCEEEEecccCCccccCCCCcEE
Confidence 8753333467788887763 34652 33321 15689996554 68999999886432 123455
Q ss_pred EEEeCCCCCCEEcccc--cccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 211 LYRSRDFMKWTKAKHP--IHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 211 ly~S~Dl~~W~~~~~~--l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
+.+. |...|+..+.+ +.........|+|.+|+.+ | +++|++|..
T Consensus 151 ~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~YYl~ys~~ 196 (288)
T cd09000 151 LQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD--G-------------WYYLLIAEG 196 (288)
T ss_pred EEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC--C-------------EEEEEEecC
Confidence 5554 23345444432 2222233578999999986 5 899998864
No 25
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=99.34 E-value=5.3e-11 Score=124.02 Aligned_cols=180 Identities=14% Similarity=0.255 Sum_probs=120.8
Q ss_pred eeEEECCEEEEEEeeCCCCC---------CCCccEEEEeecCCcCCceecccccCCC--CCccCCCeEeeeEEEcCC---
Q 008189 62 GPMYYKGIYHLFYQYNPKGA---------VWGNIVWAHSVSKDLINWEALEPALYPS--KPFDINGCWSGSATVLPG--- 127 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~---------~~g~~~Wgha~S~Dlv~W~~~~~al~P~--~~~D~~gv~SGsav~~~d--- 127 (574)
.++.++|+|+||........ .+....+-..+|+||++|+.++.++.|. ..|. .++|.+.++.. +
T Consensus 13 ~~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w~-~~~WAP~v~~~-~~~~ 90 (311)
T cd09003 13 TAVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKWA-GNSWAPSIAVK-KING 90 (311)
T ss_pred CeEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCcc-cccCCCceEEe-ccCC
Confidence 46788999999987653321 1223468889999999999999988742 3443 47899999874 6
Q ss_pred -CeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecC-CCCCCcC-ccCCeeEEecCCCeEEEEEeeecC
Q 008189 128 -NKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPG-PDVNASA-FRDPTTAWWSNDGHWRMLVGSRRK 204 (574)
Q Consensus 128 -g~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~-~~~~~~~-fRDP~Vvw~~~~g~~~M~~g~~~~ 204 (574)
|++||||+.. ...+++|+|++.. -.|+...+.|++... ++..... -.||.++++ ++|++||++++...
T Consensus 91 ~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~D-dDG~~Yl~~g~~~~ 161 (311)
T cd09003 91 KGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVD-DDGQGYLYFGGGVP 161 (311)
T ss_pred CCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeEEC-CCCCEEEEECCccC
Confidence 9999999863 2357899988764 468875456777432 2221122 369996554 78999999985321
Q ss_pred -----CeeEEEEEE-eCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 205 -----HRGMAYLYR-SRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 205 -----~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
..+.+.+.+ ++|+..- .+++..- .....+|.|.+++.+ | +++|++|..
T Consensus 162 ~~~~~~~~~i~i~~l~~D~~~~--~g~~~~i-~~~~~~Egp~~~K~~--G-------------~YYL~ys~~ 215 (311)
T cd09003 162 GGRWANPNTARVIKLGDDMISV--DGSAVTI-DAPYFFEASGLHKIN--G-------------TYYYSYCTN 215 (311)
T ss_pred CCccccCCCEEEEEeCCCceec--cCCceEc-cCCCceEeeeEEEEC--C-------------EEEEEEeCC
Confidence 123455665 4566443 2322111 123578999999987 6 899998864
No 26
>PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32. It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B ....
Probab=99.30 E-value=1e-11 Score=104.42 Aligned_cols=75 Identities=31% Similarity=0.392 Sum_probs=55.5
Q ss_pred cceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCCCCCcccCCccccccceE-EEEecC--CCeEEEEEEEeCCeE
Q 008189 443 GPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFAGF-VNVDLS--DKKLSLRSLIDHSVV 519 (574)
Q Consensus 443 ~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~~~~~~~~~~~~-~~~~~~--~~~~~LrIfvD~S~v 519 (574)
..+||.|+++++.+++|.|.||... +. +++||++|+.. ...+.++.. ...... ++.++||||||+|+|
T Consensus 9 ~~~g~~l~~s~~~~e~~~i~~d~~~---~~---l~vDR~~s~~~---~~~~~~~~~~~~~~~~~~~~~l~L~i~vD~Ssv 79 (86)
T PF08244_consen 9 DSFGLRLRASNDGGEETSIGYDPAN---GT---LTVDRTNSGIN---DFSEEFGTFVRSAPLDLGDKILKLRIFVDRSSV 79 (86)
T ss_dssp CEEEEEEEEETTSSSEEEEEEETTT---TE---EEEEETTSSTT---SCCCEEEEEEEEEETTTTESEEEEEEEEETTEE
T ss_pred CCeEEEEEECCCccEEEEEEEECCC---CE---EEEeCCCCccc---ccccccCcceEEeeccCCCCcEEEEEEEeCCEE
Confidence 4799999999999999999998643 32 67899998733 233444442 222222 366899999999999
Q ss_pred EEEcCCC
Q 008189 520 ESFGAGG 526 (574)
Q Consensus 520 EvFvNdG 526 (574)
|||+|||
T Consensus 80 EiFvNdG 86 (86)
T PF08244_consen 80 EIFVNDG 86 (86)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 9999987
No 27
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=99.30 E-value=1.7e-10 Score=118.09 Aligned_cols=177 Identities=23% Similarity=0.316 Sum_probs=122.7
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCcc--CCCe-EeeeEEEcCCCeeEEEEeeec
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFD--INGC-WSGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D--~~gv-~SGsav~~~dg~~~l~YTg~~ 138 (574)
.+++++|.|+||+...+.. ..+..++|+||+||+..+.++.+....+ ..+. |.+.++. .+|+++|||+...
T Consensus 14 ~i~~~~~~yY~~~t~~~~~-----~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yy~y~~~~~ 87 (286)
T PF04616_consen 14 SIVRFGDGYYLYGTTDPEG-----PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIHY-INGKYYMYYSDSG 87 (286)
T ss_dssp EEEEETTEEEEEEEEBTCE-----SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEEE-ETTEEEEEEEEES
T ss_pred EEEEECCEEEEEEEcCCCC-----CeEEEEECCCCcccccceeeecccccccccccccccCCeEEE-cCCeEEEEEEccC
Confidence 5778899999999876543 3588999999999999998876664333 2233 9999986 5999999999333
Q ss_pred CCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC--eeEEEEEE-eC
Q 008189 139 HKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKH--RGMAYLYR-SR 215 (574)
Q Consensus 139 ~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~--~G~i~ly~-S~ 215 (574)
......+++|+|++.. ..|+.. ..+... .....||.|+.. ++|++||+++..... .+.|.+.+ ++
T Consensus 88 ~~~~~~~~va~a~~~~----Gp~~~~--~~~~~~-----~~~~iD~~vf~d-~dG~~Yl~~~~~~~~~~~~~i~~~~l~~ 155 (286)
T PF04616_consen 88 GDAGSGIGVATADSPD----GPWTDP--GKIPIP-----GGNSIDPSVFVD-DDGKYYLYYGSWDNGDPGGGIYIAELDP 155 (286)
T ss_dssp TSTTEEEEEEEESSTT----S-EEEE--EEEEEE-----SSSSSSEEEEEE-TTSEEEEEEEESTTTSSEEEEEEEEEET
T ss_pred CCCCcceeEEEeCCcc----cccccc--cceeec-----cccccCceEEEe-cCCCcEEeCcccCCCccceeEEeecccC
Confidence 2345568899998763 478764 222211 245689996554 679999999986532 34566666 56
Q ss_pred CCCCCEEcc-cccccC---CCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 216 DFMKWTKAK-HPIHSL---ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 216 Dl~~W~~~~-~~l~~~---~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
|...+.... ..+... ......|+|.+|+.+ | +++|++|...
T Consensus 156 d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~yYl~~s~~~ 200 (286)
T PF04616_consen 156 DGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG--G-------------KYYLFYSAGG 200 (286)
T ss_dssp TTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET--T-------------EEEEEEEESG
T ss_pred ccccccCcccccccccccccCCccccceEEEEcC--C-------------CEEEEEeccC
Confidence 666665433 122222 235689999999987 5 8999999643
No 28
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.27 E-value=6.9e-10 Score=113.77 Aligned_cols=175 Identities=13% Similarity=0.073 Sum_probs=117.2
Q ss_pred eeEEE--CCEEEEEEeeCCCCCCC-CccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcC-CCeeEEEEeee
Q 008189 62 GPMYY--KGIYHLFYQYNPKGAVW-GNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLP-GNKPIILYTGV 137 (574)
Q Consensus 62 g~~~~--~G~yHlfyq~~P~~~~~-g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~-dg~~~l~YTg~ 137 (574)
.+++. +|+||||+-..-....+ +...+.+++|+||+||+..+.++.... ...++|.+.++.++ +|+++|+|++.
T Consensus 22 ~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~y~~~~s~~ 99 (276)
T cd08983 22 FILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQYVVYWSSR 99 (276)
T ss_pred eEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCeEEEEEecc
Confidence 56666 89999999865322111 346799999999999999887642211 23578999998754 68999999987
Q ss_pred cCC---CcceEEE--EEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEE
Q 008189 138 DHK---ERQVQNY--AVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLY 212 (574)
Q Consensus 138 ~~~---~~~~q~l--A~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly 212 (574)
... ....+++ +.+.| +.+|+. ..|++.+ + ....|+.++ + .+|+|||++....+ ..|.+.
T Consensus 100 ~~~~~~~~~~~~i~~~tt~D-----f~tft~--p~~~~~~--~---~~~ID~~v~-~-~~g~~Yl~~k~~~~--~~i~~~ 163 (276)
T cd08983 100 LYDNTGGFYNYRLYATTTSD-----FVTFTE--PKVWIDL--G---ANVIDTTVV-K-VGGTYYRFYKNEGS--KDIELA 163 (276)
T ss_pred cCCCCCCCccEEEEEEecCc-----ccccCC--CeEeecC--C---CCeEeeEEE-E-eCCEEEEEEecCCC--CcEEEE
Confidence 542 1222333 33334 378986 2566652 2 456899964 4 35999999876432 458888
Q ss_pred EeCCCC-CCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEee
Q 008189 213 RSRDFM-KWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSL 269 (574)
Q Consensus 213 ~S~Dl~-~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 269 (574)
+|++|. .|+...... .......|-|.+|+.+.. .+|+|+++.
T Consensus 164 ~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~-------------~~y~L~~d~ 206 (276)
T cd08983 164 RSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNG-------------GGWYLYGDN 206 (276)
T ss_pred EeCCCCCCceEecccc--cCCCCceeCCeEEEECCC-------------CEEEEEEEE
Confidence 999986 687654321 122347899999999732 288888764
No 29
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=99.20 E-value=1.2e-09 Score=112.21 Aligned_cols=176 Identities=19% Similarity=0.179 Sum_probs=113.8
Q ss_pred eEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCc-------cCCCeEeeeEEEcCCCeeEEEEe
Q 008189 63 PMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPF-------DINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 63 ~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~-------D~~gv~SGsav~~~dg~~~l~YT 135 (574)
++.++|+|+||.-.. .+..++|+||+||+.++.+|.+...+ ...++|.+.++. .+|+++|||+
T Consensus 5 vi~~~~~YY~~~T~~---------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~yylyys 74 (279)
T cd08988 5 IIKEGDTWYVFGTGP---------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGKFYLYYS 74 (279)
T ss_pred EEEECCEEEEEEecC---------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCEEEEEEE
Confidence 577899999997531 37789999999999999888644332 235799999987 4899999999
Q ss_pred eecCC-CcceEEEEEecCCCCccc-ceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEE
Q 008189 136 GVDHK-ERQVQNYAVPANPSDPYL-RKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYR 213 (574)
Q Consensus 136 g~~~~-~~~~q~lA~s~D~~d~~l-~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~ 213 (574)
+.... ....+++|+|++..++.- ..|++ ..|++..... ......||.++++ ++|++||++++.. .| |.+.+
T Consensus 75 ~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~D-dDG~~Yl~~g~~~--~g-i~~~e 147 (279)
T cd08988 75 VSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIFD-QHGQPWLSFGSFW--GG-IKLFE 147 (279)
T ss_pred eccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEEc-CCCCEEEEecccC--CC-EEEEE
Confidence 86432 345678999987654311 12443 2566653221 1134579996555 7899999998642 12 44444
Q ss_pred -eCCCCCCEEcccc--cccC-CCCCccccceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 214 -SRDFMKWTKAKHP--IHSL-ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 214 -S~Dl~~W~~~~~~--l~~~-~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
++|+..-...+.. +... ......|-|.+++-+ | +++|++|..
T Consensus 148 L~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~S~g 193 (279)
T cd08988 148 LDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG--D-------------YYYLFVSFG 193 (279)
T ss_pred ECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC--C-------------eEEEEEEcC
Confidence 4554432111111 2111 123467999999986 5 888988864
No 30
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.20 E-value=5.1e-10 Score=113.63 Aligned_cols=131 Identities=20% Similarity=0.267 Sum_probs=94.0
Q ss_pred eeEEEC-CEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccC-------CCCCccCCCeEeeeEEEcCC-CeeEE
Q 008189 62 GPMYYK-GIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALY-------PSKPFDINGCWSGSATVLPG-NKPII 132 (574)
Q Consensus 62 g~~~~~-G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~-------P~~~~D~~gv~SGsav~~~d-g~~~l 132 (574)
.+++.+ |+|||||...... ......+++|+|+|+++|+..+..+. +...++...+.++.++.+++ |+++|
T Consensus 70 ~v~~~~dg~~~~~Yt~~~~~-~~~~~~i~~A~S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m 148 (276)
T cd08979 70 SVVRDPDGTYRMFYTGYDRP-KGAVQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRM 148 (276)
T ss_pred eEEEcCCCeEEEEEecccCC-CCCcceEEEEECCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEE
Confidence 556677 9999999976532 23457899999999999999876542 22334446788999887643 89999
Q ss_pred EEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 008189 133 LYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSR 202 (574)
Q Consensus 133 ~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~ 202 (574)
+|++........+.+|.|.|. ++|++....+.. ..+.....+++|.++ + .+|+|+|++.+.
T Consensus 149 ~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~~~--~~~~~~~~~e~P~~~-~-~~g~~~l~~~~~ 209 (276)
T cd08979 149 YYGARDADERGAIGLATSPDL-----IHWTPVPPPPGP--RTGYDDGQLEVPQVV-K-IDGRWYLLYSGR 209 (276)
T ss_pred EEEeEccCCCcEEEEEECCCC-----CcceECCCCCCC--CCcccCCcCccceEE-E-ECCEEEEEEEec
Confidence 999876444567889999885 899986432212 122234678999964 4 479999999876
No 31
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.14 E-value=2.1e-09 Score=112.55 Aligned_cols=166 Identities=19% Similarity=0.247 Sum_probs=112.6
Q ss_pred eeEEECCEEEEEEeeCCCCC-CCCccEEEEeecCCcC-Cceecc-cccCCC------------------CCccCCCeEee
Q 008189 62 GPMYYKGIYHLFYQYNPKGA-VWGNIVWAHSVSKDLI-NWEALE-PALYPS------------------KPFDINGCWSG 120 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~-~~g~~~Wgha~S~Dlv-~W~~~~-~al~P~------------------~~~D~~gv~SG 120 (574)
.+++++|+|||||+..-... .-...+.|+|+|++.. .|+++. +.|.|. +.||..++..+
T Consensus 116 ~Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~~dg~w~~d~~~~~~~~~~g~wD~~~v~~P 195 (349)
T cd08992 116 EVLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPSNDGIWKGDEDNRFLVKKKGSFDSHKVHDP 195 (349)
T ss_pred EEEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCCcCCceeeccCceeEeccCCCcccCceECC
Confidence 67789999999999542111 1123467888887765 698764 456564 23677788888
Q ss_pred eEEEcCCCeeEEEEeeecC-------CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCC
Q 008189 121 SATVLPGNKPIILYTGVDH-------KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDG 193 (574)
Q Consensus 121 sav~~~dg~~~l~YTg~~~-------~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g 193 (574)
+++. .+|+++|||+|+.. ...+.+++|+|++.. -.|+|.+.+||+... + ..+ ||+ ..+
T Consensus 196 ~v~~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----GPf~r~~~nPi~~~~------~--~~~-~~~-~~~ 260 (349)
T cd08992 196 CLFP-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----GPYVKSPYNPITNSG------H--ETC-VWQ-YKG 260 (349)
T ss_pred EEEE-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCC----CCCEeCCCCcccCCC------C--ceE-EEe-cCC
Confidence 8776 59999999999752 134678999998875 468998889998521 1 236 688 456
Q ss_pred eE-EEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEec
Q 008189 194 HW-RMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 194 ~~-~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~ 245 (574)
.+ .|+..-+ ...|. +..|+|+++|+-...+-..+...+...|||-+.-+
T Consensus 261 ~~~~~~~~d~-~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (349)
T cd08992 261 GIAAMLTTDG-PEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADEDP 310 (349)
T ss_pred ceEEEEeccC-CCCce--EEeCCCCccEEEeeeccCCCccccCccCcccccCC
Confidence 66 5554432 22344 78899999999765433233445667788776654
No 32
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.11 E-value=4.8e-09 Score=108.34 Aligned_cols=129 Identities=20% Similarity=0.201 Sum_probs=88.3
Q ss_pred eeEEE--CCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCC-CccCCCeEeeeEEEcCCCeeEEEEeeec
Q 008189 62 GPMYY--KGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSK-PFDINGCWSGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~--~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~-~~D~~gv~SGsav~~~dg~~~l~YTg~~ 138 (574)
.++++ +|+||||.-............+.+.+|+||+||+.++.++.+.. .+...++|.+.++. .+|+++|||+...
T Consensus 10 ~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~-~~G~yyly~s~~~ 88 (291)
T cd08981 10 FILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHE-YKGRYYMFATFHN 88 (291)
T ss_pred EEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeee-eCCEEEEEEEecc
Confidence 46677 99999998765322111123589999999999999998886543 34456799999876 5999999998764
Q ss_pred CC-CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEee
Q 008189 139 HK-ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGS 201 (574)
Q Consensus 139 ~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~ 201 (574)
.. ....+++|+|++.. -.|+.....|+... + ....||.++ .+.+|++||+++.
T Consensus 89 ~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~--~---~~~iDp~~f-~DdDG~~Yl~~~~ 142 (291)
T cd08981 89 PGGERRGTAILVSDSPE----GPFVPHSDGPVTPE--D---WMCLDGTLY-VDEDGKPWMVFCH 142 (291)
T ss_pred CCCceeeEEEEECCCCC----CCCEeCCCCccCCC--C---CceEcCceE-EcCCCCEEEEEEe
Confidence 32 22346788887754 35766433344321 1 235799854 5478999999864
No 33
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=99.04 E-value=1.3e-08 Score=103.94 Aligned_cols=168 Identities=18% Similarity=0.188 Sum_probs=109.1
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCc------cCCCeEeeeEEEcCCCeeEEEEe
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPF------DINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~------D~~gv~SGsav~~~dg~~~l~YT 135 (574)
.+++++|+|+||+..... ...+...+|+||+||+..+.++...... ...++|.+.++. .+|+++|+|+
T Consensus 12 ~ii~~~~~yY~~~t~~~~-----~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~yy~yy~ 85 (269)
T cd08989 12 SIIRAGDDYYMASSTFEW-----FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLSY-YDGKFWLIYT 85 (269)
T ss_pred cEEEECCeEEEEECcccc-----CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEEE-ECCEEEEEEe
Confidence 578899999999854221 1236778999999999998877543211 235799999877 5999999999
Q ss_pred eecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEE-e
Q 008189 136 GVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYR-S 214 (574)
Q Consensus 136 g~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~-S 214 (574)
+........+++|++++..+ .|+. |+... ....||.++.+ ++|+.||+.+.. +.|.+.+ +
T Consensus 86 ~~~~~~~~~i~va~sd~~~G----pw~~----~~~~~------~~~IDp~~f~D-~dG~~Yl~~~~~----~~i~l~~l~ 146 (269)
T cd08989 86 AVKVWKDCHNYLFTAEDITG----PWSR----PIFLN------YGGFDPSLFHD-DDGKKYLINMGW----SGIRLQEYS 146 (269)
T ss_pred ccccCCCceEEEEEECCCCC----CCcC----CEECC------CCcccCceEEc-CCCCEEEEecCC----CcEEEEEEC
Confidence 86433345678899877542 4653 44321 23479996544 799999998753 2244444 3
Q ss_pred CCCCCCEEcccc----cccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 215 RDFMKWTKAKHP----IHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 215 ~Dl~~W~~~~~~----l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
.|+..= .+.+ +.........|-|.+++.+ | +++|++|...
T Consensus 147 ~~~~~~--~~~~~~~~~~~~~~~~~~Egp~~~k~~--G-------------~YYl~~S~~~ 190 (269)
T cd08989 147 PAEKKL--IGKPLNKVIIKGTDDGLTEGPHLYKIN--G-------------KYYLTTAEGG 190 (269)
T ss_pred hhhCCC--CCCceeEEEecCCCCCccccceEEEEC--C-------------EEEEEEeeCC
Confidence 332211 1111 1111223468999999976 5 8999998644
No 34
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.04 E-value=3.7e-09 Score=107.79 Aligned_cols=97 Identities=13% Similarity=0.200 Sum_probs=75.6
Q ss_pred eeEEEcCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEec--CCCCCCcCccCCeeEEecCCCeEEE
Q 008189 120 GSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFP--GPDVNASAFRDPTTAWWSNDGHWRM 197 (574)
Q Consensus 120 Gsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~--~~~~~~~~fRDP~Vvw~~~~g~~~M 197 (574)
+.++. .+|+++|||++........+++|+|+|+ ++|++.+ +|+|.+ ...++...++||.|+ + .+|+|+|
T Consensus 3 P~v~~-~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~m 73 (268)
T cd08993 3 PAVVY-DNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYYI 73 (268)
T ss_pred CeEEE-ECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEEE
Confidence 45665 5999999999876555678999999995 8999974 565533 334556788999965 4 4889999
Q ss_pred EEeeec--CCeeEEEEEEeCCCCCCEEccc
Q 008189 198 LVGSRR--KHRGMAYLYRSRDFMKWTKAKH 225 (574)
Q Consensus 198 ~~g~~~--~~~G~i~ly~S~Dl~~W~~~~~ 225 (574)
++++.. ....+|.+++|+|+.+|++.+.
T Consensus 74 ~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~ 103 (268)
T cd08993 74 TYAARPNAPNGTRIGLATTKDFITFERLGT 103 (268)
T ss_pred EEEccCCCCCCcEEEEEEeCCcceEEEecc
Confidence 998865 3455799999999999999864
No 35
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.01 E-value=1.1e-08 Score=104.48 Aligned_cols=164 Identities=16% Similarity=0.123 Sum_probs=108.7
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCC-----------ccCCCeEeeeEEEcCCCee
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKP-----------FDINGCWSGSATVLPGNKP 130 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~-----------~D~~gv~SGsav~~~dg~~ 130 (574)
.+++++|+|+||.-..-. ...+...+|+||+||+.++.++.+... .-..++|.+.++.. +|++
T Consensus 15 ~v~~~~~~yY~~~t~~~~-----~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~gky 88 (269)
T cd09001 15 DVIRVGDDYYMVSTTMHY-----SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLRYH-NGTF 88 (269)
T ss_pred eEEEECCEEEEEECCccc-----CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceEEE-CCEE
Confidence 578889999999854211 123678899999999999877643211 11257999999874 9999
Q ss_pred EEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEE
Q 008189 131 IILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAY 210 (574)
Q Consensus 131 ~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ 210 (574)
+|+|+... ..+.+|++++.. -.|+.. +++ ....||.++++ .+|+.||+++.. .+.
T Consensus 89 y~yys~~~----~~~~v~~a~~p~----Gpw~~~--~~~---------~~~iDp~~f~D-~dG~~Yl~~~~~-----~i~ 143 (269)
T cd09001 89 YVFFCTNT----GGTYIYTADDPE----GPWTKT--ALD---------GGYHDPSLLFD-DDGTAYLVYGGG-----TIR 143 (269)
T ss_pred EEEEEecC----CCeEEEEcCCCC----CCCcCC--CcC---------CCcccCceEEc-CCCCEEEEeCCC-----cEE
Confidence 99999852 356788887653 346542 222 13579996554 789999998753 244
Q ss_pred EEE-eCCCCCCEEcccccccCC--CCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 211 LYR-SRDFMKWTKAKHPIHSLA--NTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 211 ly~-S~Dl~~W~~~~~~l~~~~--~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
+.+ +.|+....-....+.... .....|-|.+++-+ | +++|++|...
T Consensus 144 ~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--G-------------~YYl~~S~~~ 192 (269)
T cd09001 144 LVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN--G-------------YYYIFNIAWG 192 (269)
T ss_pred EEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC--C-------------EEEEEEecCC
Confidence 454 667666521111122221 13578999999875 5 8999998753
No 36
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=98.95 E-value=2.1e-08 Score=100.99 Aligned_cols=154 Identities=19% Similarity=0.255 Sum_probs=113.9
Q ss_pred cee-eeEEECCEEEEEEeeCC--CCCCCCccEEEEeecCCcCC-ceec-ccccCC-CCCccCCCeEeeeEEEcCCCeeEE
Q 008189 59 WIN-GPMYYKGIYHLFYQYNP--KGAVWGNIVWAHSVSKDLIN-WEAL-EPALYP-SKPFDINGCWSGSATVLPGNKPII 132 (574)
Q Consensus 59 w~N-g~~~~~G~yHlfyq~~P--~~~~~g~~~Wgha~S~Dlv~-W~~~-~~al~P-~~~~D~~gv~SGsav~~~dg~~~l 132 (574)
-.| ++++.++++||+|+--- +...-...|.+.|.|+|+++ |+-. .+.+.| ..++|.-||..+.++.. +++++|
T Consensus 31 vFNpav~~~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~I-~~~y~m 109 (314)
T COG2152 31 VFNPAVVLVGGELLLLYRVVEGYYEDHSSISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTKI-GGRYYM 109 (314)
T ss_pred EecceeEEECCEEEEEEEEeccccccCccceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEEE-CCEEEE
Confidence 557 89999999999999711 01111457899999999999 9866 467888 55677789999999885 899999
Q ss_pred EEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC---CeeEE
Q 008189 133 LYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK---HRGMA 209 (574)
Q Consensus 133 ~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~---~~G~i 209 (574)
.|||.+ +..+..++|+++|. .+|+|. ++++.+ ++||-..+=...+|+|+|+---... ..+-|
T Consensus 110 tYTa~s-~~g~~~~la~t~~f-----~n~~ri--g~i~~p-------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~ni 174 (314)
T COG2152 110 TYTAYS-DKGPRLALAVTKDF-----LNWERI--GAIFPP-------DNKDAALFPKKINGKYALLHRPVLGEYGMKGNI 174 (314)
T ss_pred EEEecC-CCCcccchhhhhhh-----hhhhhc--ccccCC-------CCCCceEeeEEecCcEEEEEeecccccCccCce
Confidence 999986 45678889999885 789995 345432 3466553222257899998654332 24579
Q ss_pred EEEEeCCCCCCEEcccccc
Q 008189 210 YLYRSRDFMKWTKAKHPIH 228 (574)
Q Consensus 210 ~ly~S~Dl~~W~~~~~~l~ 228 (574)
.+..|+||.+|.....++.
T Consensus 175 wia~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 175 WIAFSPDLEHWGIHRKLLG 193 (314)
T ss_pred EEEEcCCccCCCccceeec
Confidence 9999999999987654443
No 37
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=98.93 E-value=4.2e-08 Score=100.79 Aligned_cols=163 Identities=15% Similarity=0.156 Sum_probs=104.6
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCCC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKE 141 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~ 141 (574)
.+++.+|+|+|+..... ....+...+|+||+||+.++.++.+. ..++|.+.++. .+|+++|||+......
T Consensus 19 ~i~~~~~~yY~~~t~~~-----~~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~~-~~gkyy~yys~~~~~~ 88 (280)
T cd09002 19 SILRDGEDYYMTHSSFK-----YTPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLCK-YDGRYYIYFPAIPEGG 88 (280)
T ss_pred EEEEECCEEEEEEcchh-----cCCCEEEEECCCcCCceEccccccCC----CCCEEcCeeEE-ECCEEEEEEEeecCCC
Confidence 57788999999764211 11247788999999999998877543 35799999876 6999999999876444
Q ss_pred cceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCE
Q 008189 142 RQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWT 221 (574)
Q Consensus 142 ~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~ 221 (574)
...+++|++.+.. -.|++ |+.... ...-||.|+++ .+|++||+++... .+.| +.|+..-
T Consensus 89 ~~~~~va~ad~p~----Gpw~~----~~~~~~-----~~~IDp~vf~D-ddG~~Yl~~~~~~----~~~l--~~d~~~~- 147 (280)
T cd09002 89 NWTNMVIWADSPE----GPWSK----PIDLKI-----GGCIDPGHVVD-EDGNRYLFLSGGD----RVRL--TADGLST- 147 (280)
T ss_pred CceEEEEEECCCC----CCCcC----CEecCC-----CCccCCceEEc-CCCCEEEEECCee----EEEE--CccccEe-
Confidence 5567889887653 34654 331111 12369996655 7899999986431 1111 2332211
Q ss_pred Eccc--ccccC--------CCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 222 KAKH--PIHSL--------ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 222 ~~~~--~l~~~--------~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
.+. .+..+ ..+...|-|.+++.+ | +++|++|...
T Consensus 148 -~g~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~YYl~yS~g~ 191 (280)
T cd09002 148 -DGKLEHVYDGWRYPEDWVVEGFALEGPKLKKRN--G-------------YYYLTTAVGG 191 (280)
T ss_pred -cCcCEEEecCcccccccccCCcccccceEEEEC--C-------------EEEEEEccCC
Confidence 111 11111 012347999999886 5 8999998643
No 38
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.91 E-value=6e-08 Score=99.87 Aligned_cols=185 Identities=16% Similarity=0.102 Sum_probs=116.1
Q ss_pred eEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceeccccc--CCCC-CccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 63 PMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPAL--YPSK-PFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 63 ~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al--~P~~-~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
++.++++|+||+--.. .....++|+||+||+.....+ .+.. .+...++|.+.++. .+|+++|||+....
T Consensus 5 v~~~~d~yY~~~T~~~-------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yylyys~~~~ 76 (288)
T cd08980 5 VIRHDGYYYFTATTGE-------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHY-IDGKWYIYFAAGDG 76 (288)
T ss_pred EEEECCEEEEEEEeCC-------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEE-ECCEEEEEEEccCC
Confidence 5677889999986431 358899999999999875332 2322 13346899999976 58999999998753
Q ss_pred --CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC---CeeEEEEEEe
Q 008189 140 --KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK---HRGMAYLYRS 214 (574)
Q Consensus 140 --~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~---~~G~i~ly~S 214 (574)
...+.+++|.+++..++ +..|+.. .+++.... ..--||.++ .+ +|++||+++.... ....|.+.+.
T Consensus 77 ~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~~----~~~iDp~~~-~d-dG~~Yl~~~~~~~~~~~~~~i~~~~l 147 (288)
T cd08980 77 GGNANHRMYVLENAGADPP-TGPWTFK--GRLADPTD----RWAIDGTVF-EH-NGQLYFVWSGWEGRTNGNQNLYIAKM 147 (288)
T ss_pred CCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCCC----CeeeeeEEE-EE-CCEEEEEEEccCCCCCCCccEEEEEC
Confidence 23456678887652112 3578863 34442111 233699964 43 5999999875431 1234666665
Q ss_pred CCCCCCEEcccc--cccCCC------CCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEEEEEE
Q 008189 215 RDFMKWTKAKHP--IHSLAN------TGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGT 281 (574)
Q Consensus 215 ~Dl~~W~~~~~~--l~~~~~------~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 281 (574)
.+...+. +.+ +..+.. ....|-|.+++.+ | +++|++|........|.+|-
T Consensus 148 ~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~--G-------------~yYl~yS~~~~~~~~Y~v~~ 205 (288)
T cd08980 148 SNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN--G-------------KVFLTYSASGSWTPDYCLGL 205 (288)
T ss_pred CCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC--C-------------EEEEEEECCCCCCCCCEEEE
Confidence 5543442 322 222211 1357999999997 5 89999997544345666654
No 39
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=98.90 E-value=9.2e-08 Score=101.45 Aligned_cols=219 Identities=17% Similarity=0.186 Sum_probs=127.7
Q ss_pred ccccCCCccccchhhhccCcccccceeecCCCcee--eeEE--------ECCEEEEEEeeCCCC----CCCCccEEEEee
Q 008189 27 ASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWIN--GPMY--------YKGIYHLFYQYNPKG----AVWGNIVWAHSV 92 (574)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~RP~~H~~p~~gw~N--g~~~--------~~G~yHlfyq~~P~~----~~~g~~~Wgha~ 92 (574)
+..-++|+=.|.++-..+ +-...+.=|+. .++. ++|.--+|-+-.|.. ..|+..|+++.-
T Consensus 29 ~~~~p~~~~~tipnI~~~------~~~~~~dldVWDsWPLqd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY 102 (428)
T PF02435_consen 29 SYQVPYFNASTIPNIPAA------FPVMADDLDVWDSWPLQDADGNVVNYNGYQVVFALTADRHEDPDDRHDDARIYLFY 102 (428)
T ss_dssp TTB--SBGGGG----GCG------EEECTTE-EEEEEEEEE-TTSSBEEBTTEEEEEEEEE-TT--GGGCSCGEEEEEEE
T ss_pred cccccCCccccCCccCcc------ccccccceeeeccceeecccccEEEECCEEEEEEEecCCccCCccccCCcEEEEEE
Confidence 334444555555544332 22333455666 4443 588555566665543 357889999999
Q ss_pred cCCcC----CceecccccCCCCCc-cCCCeEeeeEEEcC-CCeeEEEEeeecC--CC--cceE-----EEEEecCCCCcc
Q 008189 93 SKDLI----NWEALEPALYPSKPF-DINGCWSGSATVLP-GNKPIILYTGVDH--KE--RQVQ-----NYAVPANPSDPY 157 (574)
Q Consensus 93 S~Dlv----~W~~~~~al~P~~~~-D~~gv~SGsav~~~-dg~~~l~YTg~~~--~~--~~~q-----~lA~s~D~~d~~ 157 (574)
|++.. +|+..+.++...... ....-|||||+... ||+..||||+... .. .|+. +++...+. +-.
T Consensus 103 ~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~~dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~-~v~ 181 (428)
T PF02435_consen 103 SKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNNDDGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDD-GVW 181 (428)
T ss_dssp EETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEESTTTSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECST-EEE
T ss_pred ecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcCCCCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCC-cee
Confidence 99998 999999877655431 22446999999987 7999999999653 11 2222 12232331 223
Q ss_pred cceeeccCCCceEecCCC-CC------CcCccCCeeEEecCCCeEEEEEeeec---C-----------------------
Q 008189 158 LRKWIKPDNNPVVFPGPD-VN------ASAFRDPTTAWWSNDGHWRMLVGSRR---K----------------------- 204 (574)
Q Consensus 158 l~~w~k~~~~Pvi~~~~~-~~------~~~fRDP~Vvw~~~~g~~~M~~g~~~---~----------------------- 204 (574)
+..|+++ ..|+.++.. |. ...||||++|-...+|+-||++-+.. +
T Consensus 182 i~g~~~~--~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~ 259 (428)
T PF02435_consen 182 ITGFSNH--HELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENND 259 (428)
T ss_dssp EEEEEEE--EEEES--SSSB--HHHHHH---EEEEEEEETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSC
T ss_pred Eccccce--eEeeccchhhhhChhhcCCccccCCeeEECCCCCcEEEEEecccCCCCCccccCccccccccccccccccc
Confidence 4456554 355554322 11 26899999654436899898875432 1
Q ss_pred -------CeeEEEEEEeCC--CCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEee
Q 008189 205 -------HRGMAYLYRSRD--FMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSL 269 (574)
Q Consensus 205 -------~~G~i~ly~S~D--l~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 269 (574)
..|+|.|.+..| +..|+...+++.+..-....|.|+++.++ | ||+|+.+.
T Consensus 260 ~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~de~ERP~iv~~~--g-------------kyYLFt~s 318 (428)
T PF02435_consen 260 NKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVNDELERPHIVFMN--G-------------KYYLFTIS 318 (428)
T ss_dssp CHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTBS-EEEEEEEEET--T-------------EEEEEEEE
T ss_pred cccccceecceeeeEEecCCCCCccEEeCcceecccccccccCCcEEEEC--C-------------EEEEEEEe
Confidence 156899998755 45799886444344445689999999998 6 99997654
No 40
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.87 E-value=9.6e-08 Score=97.58 Aligned_cols=172 Identities=16% Similarity=0.071 Sum_probs=106.0
Q ss_pred eEEE-CCEEEEEEeeCCCCCC-----CCccEEEEeecCCcCCceecccccCCCCC------------ccCCCeEeeeEEE
Q 008189 63 PMYY-KGIYHLFYQYNPKGAV-----WGNIVWAHSVSKDLINWEALEPALYPSKP------------FDINGCWSGSATV 124 (574)
Q Consensus 63 ~~~~-~G~yHlfyq~~P~~~~-----~g~~~Wgha~S~Dlv~W~~~~~al~P~~~------------~D~~gv~SGsav~ 124 (574)
++.. +|+|+|+.-....+.. ......-.++|+||+||+.++.++..... +...++|.+.+..
T Consensus 7 v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~~ 86 (269)
T cd08986 7 VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVWAPELHY 86 (269)
T ss_pred EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcCCceEEE
Confidence 4445 6799999875432210 01235778999999999999888754321 2346799999987
Q ss_pred cCCCeeEEEEeeecCC-CcceEEEEEecCCCCcccceeeccCCC-ceEecCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 008189 125 LPGNKPIILYTGVDHK-ERQVQNYAVPANPSDPYLRKWIKPDNN-PVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSR 202 (574)
Q Consensus 125 ~~dg~~~l~YTg~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~-Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~ 202 (574)
.+|+++|+|+..... ....+++|++++.. -.|+..... |+ ..-.||.++ .+.+|++||+++..
T Consensus 87 -~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~f-~D~DG~~Yl~~~~~ 151 (269)
T cd08986 87 -IKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSLF-EDDDGKVYLVWHNT 151 (269)
T ss_pred -ECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCceE-EcCCCCEEEEeeCC
Confidence 489999999976432 23456677776653 346653221 11 234799954 55789999998753
Q ss_pred cCCeeEEEEEEeCCCCCCEEcccccccCC----CCCccccceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 203 RKHRGMAYLYRSRDFMKWTKAKHPIHSLA----NTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 203 ~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~----~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
. + .--+.|+....-....+.... .....|-|.+++.+ | +++|++|..
T Consensus 152 ~-----i-~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYL~yS~~ 202 (269)
T cd08986 152 L-----I-ARLKDDLSGLAGDPVRIDPSPTFYKDEIGHEGAFVFKYG--G-------------KYYLFGTAW 202 (269)
T ss_pred c-----e-EeccCccccccCCcEEEecccccccCCccccccEEEEEC--C-------------EEEEEEeec
Confidence 1 1 122556554321111111111 12357999999976 5 899999864
No 41
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=98.79 E-value=3.6e-07 Score=92.40 Aligned_cols=192 Identities=18% Similarity=0.329 Sum_probs=121.2
Q ss_pred eecCCCc-ee----eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccC----CCCCccCCCeEeeeEE
Q 008189 53 FQPPKHW-IN----GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALY----PSKPFDINGCWSGSAT 123 (574)
Q Consensus 53 ~~p~~gw-~N----g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~----P~~~~D~~gv~SGsav 123 (574)
+.|..|| +. -.++++|+||||--.... ..|+-+-+. |++|+.++.|+. +.. ...+.|.+.++
T Consensus 14 ~~pk~~~~~~lkDPtiv~~nGkYyvYgT~~~~------~~~~s~~~S-f~~Ws~~g~A~q~~l~~~~--~~~~fwAPqVf 84 (303)
T cd08987 14 ISPKSDWIVAIKDPTVVYYNGRYHVYATTADA------GNYGSMYFN-FTDWSQAASATQYYLQNGN--MTGYRVAPQVF 84 (303)
T ss_pred ccCCCCCeeeecCCeEEEECCEEEEEEccCCC------CCceeeeec-ccCHhHhccchhhcccCCC--CCcccccCEEe
Confidence 3466788 55 667789999999765421 234333333 999999987763 221 23468889887
Q ss_pred E-cCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 008189 124 V-LPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSR 202 (574)
Q Consensus 124 ~-~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~ 202 (574)
. ..++++||+|+.. ..++|+|.|..++ -.|.. ..|++...........-|++|+ . .++..||+.+..
T Consensus 85 yf~pk~kwYL~Yq~~------~~~yaTs~dp~~P--~~ws~--~qpl~~~~~~~~~~~~ID~~vI-~-Dd~~~YLff~~d 152 (303)
T cd08987 85 YFAPQNKWYLIYQWW------PAAYSTNSDISNP--NGWSA--PQPLFSGTPNGSPGGWIDFWVI-C-DDTNCYLFFSDD 152 (303)
T ss_pred eeccCCEEEEEEecC------ceEEEeCCCCCCC--CccCC--CcccccCcccCCCCCccceeEE-e-CCCCEEEEEecC
Confidence 2 2589999999952 2568999998877 46776 3688743211123456899974 3 588888887542
Q ss_pred cCCeeEEEEEEe-CCCCCCEEc-ccc--ccc-CCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEE
Q 008189 203 RKHRGMAYLYRS-RDFMKWTKA-KHP--IHS-LANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYY 277 (574)
Q Consensus 203 ~~~~G~i~ly~S-~Dl~~W~~~-~~~--l~~-~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y 277 (574)
.| .||+| ..+.+.... +.. +.. .......|-|+++++. | +.+++|++++.+..+..|
T Consensus 153 ---nG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~--G-----------~~~YlmiveA~g~~~~rY 214 (303)
T cd08987 153 ---NG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVK--G-----------QNQYLLIVEAIGSDGGRY 214 (303)
T ss_pred ---CC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEEC--C-----------CeEEEEEEEecCCCCCCe
Confidence 34 46775 222222110 111 111 1234689999999997 5 238999999876544568
Q ss_pred EEEEEeC
Q 008189 278 TIGTYNR 284 (574)
Q Consensus 278 ~vG~~d~ 284 (574)
+++ +..
T Consensus 215 frs-~Ts 220 (303)
T cd08987 215 FRS-WTA 220 (303)
T ss_pred EEE-EEc
Confidence 887 543
No 42
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.70 E-value=7.6e-07 Score=92.21 Aligned_cols=167 Identities=18% Similarity=0.218 Sum_probs=99.7
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCCC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKE 141 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~ 141 (574)
.+++++|+|+|+--.. + ++.+|+||++|+.++.++. ..++|.++++. .+|++|++|+..
T Consensus 7 ~i~~~~g~YY~~~T~~------~----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~-~~g~~Y~~~~~~---- 65 (295)
T cd08982 7 VVILFKGEYYLFASMS------G----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFV-YDGTLYYTASTY---- 65 (295)
T ss_pred eEEEECCEEEEEEeCC------C----CeEECCCcCCceECCcccC------CCCcCcCEEEE-ECCEEEEEEeCC----
Confidence 3677899999886542 1 3678999999999987764 36799999987 588876655532
Q ss_pred cceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEE--------
Q 008189 142 RQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYR-------- 213 (574)
Q Consensus 142 ~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~-------- 213 (574)
.+.+|+|.|..++ .|... .+. ......||.|+++ .+|++||++|.... .+ |.+.+
T Consensus 66 --~~~v~~s~~p~gp---~w~~~--~~~-------~~~~~IDp~vf~D-dDGk~Yl~~g~~~~-~~-i~~~eL~~d~~~~ 128 (295)
T cd08982 66 --NSRIYKTADPLSG---PWEEV--DKS-------FPPGLADPALFID-DDGRLYLYYGCSNN-YP-LRGVEVDPDTFRP 128 (295)
T ss_pred --CceEEEeCCCCCC---Ccccc--ccc-------cCCCccCCceEEC-CCCCEEEEEecCCC-CC-eEEEEECcccCCc
Confidence 2357888765321 25432 010 1134579996544 68999999875321 11 22222
Q ss_pred ----------eCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEEEEEE
Q 008189 214 ----------SRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGT 281 (574)
Q Consensus 214 ----------S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 281 (574)
+..-..|+..+.-..........|-|.+++-+ | +++|++|........|.+|-
T Consensus 129 ~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EGP~i~k~~--G-------------~YYL~yS~~~~~~~~Y~v~~ 191 (295)
T cd08982 129 IGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEGAWMTKHN--G-------------KYYLQYAAPGTEFNTYADGV 191 (295)
T ss_pred cCcceEEEeCCCCCcCeEecCcccccccCCccccccEEEEEC--C-------------EEEEEEeCCCcccCcEeEEE
Confidence 22223455433211000123357889998865 5 89999987543334455543
No 43
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=98.65 E-value=9e-07 Score=90.70 Aligned_cols=129 Identities=17% Similarity=0.177 Sum_probs=87.1
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecc--cccCCCCCccCCCeEeeeEEEcC-CCeeEEEEeeec
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALE--PALYPSKPFDINGCWSGSATVLP-GNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~--~al~P~~~~D~~gv~SGsav~~~-dg~~~l~YTg~~ 138 (574)
.+++.+|+|||||..+... .......++|+|+|+++|+..+ +.+.+...++...+-.+.++.++ +|+++|+|.+..
T Consensus 66 s~~~~~g~~~l~YTg~~~~-~~~~~~i~~A~S~D~~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~ 144 (280)
T cd08995 66 SVIKGEGTYHAFYTGHNLD-GKPKQVVMHATSDDLITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRL 144 (280)
T ss_pred EEEeeCCEEEEEEEEECCC-CCCcEEEEEEECCCCCccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEecc
Confidence 5667899999999876432 1234679999999999999875 33432223343445567777653 589999998754
Q ss_pred C----CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec
Q 008189 139 H----KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR 203 (574)
Q Consensus 139 ~----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~ 203 (574)
. .....+.++.|+| |++|+.. ++++.+..+ ..+.-|.+ ++ .+|+|+|+++.+.
T Consensus 145 ~~~~~~~~g~i~~~~S~D-----l~~W~~~--~~~~~~~~~---~~~E~P~l-~~-~~g~~~L~~s~~~ 201 (280)
T cd08995 145 LDGPYNRRGCIALFTSKD-----LKNWEYE--EPFYAPGLY---FMPECPDL-FK-MGDWWYLVYSEFS 201 (280)
T ss_pred CCCCCCCCeEEEEEEeCC-----cCcceec--CceecCCCc---ceeecceE-EE-ECCEEEEEEEecc
Confidence 2 2234566777877 4899875 466543222 34678885 45 5899999998764
No 44
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=98.56 E-value=4.2e-06 Score=85.59 Aligned_cols=146 Identities=12% Similarity=0.053 Sum_probs=94.0
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcC-Cceecccc-cCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEALEPA-LYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~~~a-l~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
.+++++|+|||||..... .+....++|+|+|.. .|++.... +.+ ...+...+..++++++.||+++|+|.+.
T Consensus 68 ~i~~~~g~yy~yy~~~~~---~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~yl~~~~~-- 141 (274)
T cd08990 68 DVVEKNGKYYLYFPARDK---DGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAYLYWGGG-- 141 (274)
T ss_pred eEEEECCEEEEEEEeecC---CCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEEEEECCc--
Confidence 678899999999997643 245679999999976 89987543 322 2222345667888887789999999864
Q ss_pred CCcceEEEE-EecCCCCcccceeeccCCCceEecC---CCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeC
Q 008189 140 KERQVQNYA-VPANPSDPYLRKWIKPDNNPVVFPG---PDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSR 215 (574)
Q Consensus 140 ~~~~~q~lA-~s~D~~d~~l~~w~k~~~~Pvi~~~---~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~ 215 (574)
+...++ .+.| +.+|+.. ..+|..+ .......+.-|.+ ++ .+|+|||++++.. ...+.+.+|+
T Consensus 142 ---~~~~~~~l~~d-----~~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~~~~~~a~s~ 207 (274)
T cd08990 142 ---LGLRVAKLKPD-----MLSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--PEEIAYATSD 207 (274)
T ss_pred ---CCEEEEEeCcc-----ccccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--CcEEEEEEcC
Confidence 233444 3334 3677642 2233211 1111223457885 45 5899999998753 3467778888
Q ss_pred CCC-CCEEccccc
Q 008189 216 DFM-KWTKAKHPI 227 (574)
Q Consensus 216 Dl~-~W~~~~~~l 227 (574)
++. -|+..+.++
T Consensus 208 ~p~GP~~~~g~~~ 220 (274)
T cd08990 208 SPLGPFTYRGVIL 220 (274)
T ss_pred CCCCCcccCcEEe
Confidence 875 577655443
No 45
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=98.54 E-value=6.1e-07 Score=92.45 Aligned_cols=105 Identities=21% Similarity=0.295 Sum_probs=79.9
Q ss_pred eeEEECCEEEEEEeeCCCC----CCCCccEEEEeecCCc-CCceec-ccccCCCC-CccCCCeEeeeEEEcCCCeeEEEE
Q 008189 62 GPMYYKGIYHLFYQYNPKG----AVWGNIVWAHSVSKDL-INWEAL-EPALYPSK-PFDINGCWSGSATVLPGNKPIILY 134 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~----~~~g~~~Wgha~S~Dl-v~W~~~-~~al~P~~-~~D~~gv~SGsav~~~dg~~~l~Y 134 (574)
.+++++|+|||||...... .......+|+|+|+|+ -+|+++ .++|.|.. .||..+++.++++...+|+++|+|
T Consensus 84 ~vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~~m~y 163 (291)
T cd08994 84 TIKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSYLLVY 163 (291)
T ss_pred eEEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCEEEEE
Confidence 6778899999999976531 1224568999999994 699984 56677754 367788999999875589999999
Q ss_pred eeecCC---CcceEEEEEecCCCCcccceeeccCCCceE
Q 008189 135 TGVDHK---ERQVQNYAVPANPSDPYLRKWIKPDNNPVV 170 (574)
Q Consensus 135 Tg~~~~---~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi 170 (574)
+|.... ..+.+++|+|+|.. .+|+|....||+
T Consensus 164 ~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 164 KGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred eccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 998642 35778999998863 479987656654
No 46
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.53 E-value=2.2e-06 Score=87.98 Aligned_cols=151 Identities=13% Similarity=0.142 Sum_probs=97.0
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcC-Cceeccccc-C-CCCCccCCCeEeeeEEEcCCCeeEEEEeeec
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEALEPAL-Y-PSKPFDINGCWSGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~~~al-~-P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 138 (574)
.+++++|+|||||..+..+ .....+++|+|+|.. .|++.+..+ . +.. ..+...+++++++||++||+|.+..
T Consensus 66 ~v~~~~g~y~~~y~~~~~~--~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~~---~~~~~Dp~v~~d~dG~~Yl~~~~~~ 140 (287)
T cd08999 66 DVSYVNGKYVLYYSARDKG--SGGQCIGVATADSPLGPFTDHGKPPLCCPEG---EGGAIDPSFFTDTDGKRYLVWKSDG 140 (287)
T ss_pred eEEEECCEEEEEEEeecCC--CCCEEEEEEECCCCCCCCccCCcceEecCCC---CCCccCCCeEECCCCCEEEEEeccC
Confidence 5678999999999876543 245679999999964 999875332 2 221 2446778888876899999997643
Q ss_pred CC--CcceEEEE-EecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec--CC--eeEEEE
Q 008189 139 HK--ERQVQNYA-VPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR--KH--RGMAYL 211 (574)
Q Consensus 139 ~~--~~~~q~lA-~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~--~~--~G~i~l 211 (574)
.. +.+.+.++ .+.|+ .+|... ...++.+........+.-|.+ ++ .+|+|||++++.. .. .=++.+
T Consensus 141 ~~~~~~~~i~~~~ls~d~-----~~~~~~-~~~i~~~~~~~~~~~~EgP~i-~k-~~g~yyl~~S~~~~~~~~~~y~i~~ 212 (287)
T cd08999 141 NSIGKPTPIYLQELSADG-----LTLTGE-PVRLLRNDEDWEGPLVEAPYL-VK-RGGYYYLFYSAGGCCSGASTYAVGV 212 (287)
T ss_pred CCCCCCceEEEEEeCCCC-----ccccCC-cEeeecccccccCCceEeeEE-EE-ECCEEEEEEEcCCccCCCCCEEEEE
Confidence 21 11224444 44443 667542 123333322233345678985 45 5899999998753 11 225788
Q ss_pred EEeCCCC-CCEEccc
Q 008189 212 YRSRDFM-KWTKAKH 225 (574)
Q Consensus 212 y~S~Dl~-~W~~~~~ 225 (574)
++|+++. .|+....
T Consensus 213 ~~s~~~~Gpw~~~~~ 227 (287)
T cd08999 213 ARSKSLLGPYVKAPG 227 (287)
T ss_pred EEeCCCcCCcCCCCC
Confidence 9999987 8887543
No 47
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.49 E-value=1e-05 Score=83.42 Aligned_cols=154 Identities=14% Similarity=0.174 Sum_probs=93.0
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcC-CceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHK 140 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~ 140 (574)
.+++.+|+|||||...... ......++|+|+|.. .|+..+..+.+.. .....++++.+.||+++|+|+.....
T Consensus 59 ~v~~~~g~yyl~ys~~~~~--~~~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl~~~~~~~~ 132 (294)
T cd08991 59 EVYYYNGKFYMYYSANDRD--EKTEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYLYYSRNNYG 132 (294)
T ss_pred EEEEECCEEEEEEEeccCC--CCcceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEEEEEecCCC
Confidence 6788999999999876433 235678999999976 7887654433321 34567889887779999999875432
Q ss_pred C--cceEEEEEecCCCCcccceeeccCCC---ceEec-------C-C---CCCCcCccCCeeEEecCCCeEEEEEeeec-
Q 008189 141 E--RQVQNYAVPANPSDPYLRKWIKPDNN---PVVFP-------G-P---DVNASAFRDPTTAWWSNDGHWRMLVGSRR- 203 (574)
Q Consensus 141 ~--~~~q~lA~s~D~~d~~l~~w~k~~~~---Pvi~~-------~-~---~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~- 203 (574)
. ......+.+.|. .+|...... |+..+ + . ..+.....-|.++ + .+|+|||++.+..
T Consensus 133 ~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~-k-~~g~yyl~ys~~~~ 205 (294)
T cd08991 133 NRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVL-K-HNGRYYLTYSANHY 205 (294)
T ss_pred CcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEEE-E-ECCEEEEEEECCCC
Confidence 1 123344565553 455421111 11111 0 0 0111234568754 5 5899999987643
Q ss_pred C-CeeEEEEEEeCCC-CCCEEc-ccccc
Q 008189 204 K-HRGMAYLYRSRDF-MKWTKA-KHPIH 228 (574)
Q Consensus 204 ~-~~G~i~ly~S~Dl-~~W~~~-~~~l~ 228 (574)
. ..-.+.+++|+++ -.|+.. +.++.
T Consensus 206 ~~~~y~~~~a~s~~~~gp~~~~~~~pl~ 233 (294)
T cd08991 206 ENEDYGVGYATADSPLGPWTKYSNNPIL 233 (294)
T ss_pred CCCCceEEEEEcCCCCCCcEecCCCceE
Confidence 1 1114778888874 689875 23444
No 48
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=98.45 E-value=2.6e-06 Score=88.88 Aligned_cols=103 Identities=17% Similarity=0.272 Sum_probs=79.8
Q ss_pred CCCeEeeeEEEcCCCe--eEEEEeeecCCCcc-eEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEec
Q 008189 114 INGCWSGSATVLPGNK--PIILYTGVDHKERQ-VQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWS 190 (574)
Q Consensus 114 ~~gv~SGsav~~~dg~--~~l~YTg~~~~~~~-~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~ 190 (574)
...+|-+.|++. +|. ++|+|.+....... .+++|.|.|+ ++|++. .+||+.+...++.....||-|+..
T Consensus 29 ~~~vfNpgai~~-~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~i- 100 (312)
T PF04041_consen 29 PNAVFNPGAIVF-DGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTKI- 100 (312)
T ss_dssp SSEEEEEEEEEE-TTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEEE-
T ss_pred cceEEcCcEEEE-CCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEEE-
Confidence 356999988864 555 89998887655444 8899999997 799886 579997766667778899998755
Q ss_pred CCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEccc
Q 008189 191 NDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKH 225 (574)
Q Consensus 191 ~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~ 225 (574)
++.|||++.+......++.+.+|+|+.+|+..+.
T Consensus 101 -~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~ 134 (312)
T PF04041_consen 101 -DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGK 134 (312)
T ss_dssp -TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEEC
T ss_pred -CCEEEEEEEEecCCCcccceEEccchHhhEEecc
Confidence 6899999988765566889999999999999874
No 49
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.41 E-value=4.1e-06 Score=85.94 Aligned_cols=89 Identities=19% Similarity=0.350 Sum_probs=63.8
Q ss_pred CCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CCeeEEEEEEeCCCCCCEEcccccccC-CCCCccccc
Q 008189 166 NNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-----KHRGMAYLYRSRDFMKWTKAKHPIHSL-ANTGMWECP 239 (574)
Q Consensus 166 ~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-----~~~G~i~ly~S~Dl~~W~~~~~~l~~~-~~~~~wEcP 239 (574)
++|||.+..+ ...+|||+|++..++|+|||+..... .....|.+|+|+||.+|+..+..+... ..+.+| +|
T Consensus 5 ~~pvl~~~~g--~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-AP 81 (276)
T cd08983 5 GNPVLTSTAG--TKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-AP 81 (276)
T ss_pred CceEEeCCcC--CCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-Cc
Confidence 6899976433 47899999876546889999876532 122358999999999999876533222 234567 99
Q ss_pred eeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 240 DFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 240 dlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
++|.....| +|+|.+|..
T Consensus 82 ev~~d~~~g-------------~y~~~~s~~ 99 (276)
T cd08983 82 EAFWDAERG-------------QYVVYWSSR 99 (276)
T ss_pred cceEcCCCC-------------eEEEEEecc
Confidence 999986333 899988864
No 50
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=98.41 E-value=8e-06 Score=82.50 Aligned_cols=149 Identities=13% Similarity=0.081 Sum_probs=94.2
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCC-
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHK- 140 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~- 140 (574)
-+++++|+|||||.....+ ......+.|+|+|+.+|....... +... ...++..++++.+++|+++|+|.+....
T Consensus 63 ~v~~~~g~yyl~y~~~~~~--~~~~~i~~a~s~d~~g~~~~~~~~-~~~~-~~~~~iDp~vf~d~dg~~yl~~~~~~~~~ 138 (271)
T cd08978 63 EVIYYEGKYYLYYSVSDFD--YNGSGIGVATSEDPTGPFEDKVIR-PPTS-NNGNSIDPTVFKDDDGKYYLYYGSGDPGA 138 (271)
T ss_pred eEEEECCEEEEEEEcccCC--CCcccEEEEECCCCCCCccccccC-cCcc-CCCCccCcceEEcCCCCEEEEEecccCCC
Confidence 6788999999999987542 234579999999999997653211 1111 2246788999987669999999876421
Q ss_pred CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC--CeeEEEEEEeCCCC
Q 008189 141 ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK--HRGMAYLYRSRDFM 218 (574)
Q Consensus 141 ~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~--~~G~i~ly~S~Dl~ 218 (574)
....+.++.+.+. ..|.. ..+++..........+..|.+ ++ .+|+|||++.+... ..-.+.+++|++..
T Consensus 139 ~~~~i~~~~l~~~-----~~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~~~~~s~~~~ 209 (271)
T cd08978 139 GFGGIYISELTDD-----LTKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNIGYATSDSID 209 (271)
T ss_pred CCCcEEEEEECcc-----ccccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceEEEEECCCCC
Confidence 1234566666553 22222 234321111112235678995 45 57999999877542 23367888898874
Q ss_pred -CCEEc
Q 008189 219 -KWTKA 223 (574)
Q Consensus 219 -~W~~~ 223 (574)
-|+..
T Consensus 210 Gp~~~~ 215 (271)
T cd08978 210 GPYVKK 215 (271)
T ss_pred CCcCcC
Confidence 46654
No 51
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.34 E-value=5e-06 Score=84.96 Aligned_cols=121 Identities=15% Similarity=0.118 Sum_probs=72.3
Q ss_pred ccCCeeEEecCCCeEEEEEeeecC---------CeeEEEEEEeCCCCCCEEcccccccCC--------------CCCccc
Q 008189 181 FRDPTTAWWSNDGHWRMLVGSRRK---------HRGMAYLYRSRDFMKWTKAKHPIHSLA--------------NTGMWE 237 (574)
Q Consensus 181 fRDP~Vvw~~~~g~~~M~~g~~~~---------~~G~i~ly~S~Dl~~W~~~~~~l~~~~--------------~~~~wE 237 (574)
+|||+|++. .+|.|||+..+... ..+.|.+|+|+||.+|+..+..+.... .....+
T Consensus 2 ~rDP~v~~~-~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVTLG-PDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEEec-CCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 799997544 57889988665421 124588999999999998775442111 123456
Q ss_pred cceeEEeccCCCCccccccCCCCceEEEEEeecCC--ceeEEEEEEEeCCCCccccCCCCCCCCcceecccCCCccceee
Q 008189 238 CPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLT--RYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTF 315 (574)
Q Consensus 238 cPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~--~~~~Y~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~fYA~~t~ 315 (574)
+|+++.++ | +|+|.+|.... ......+..-+...++|+..... ..+. .-.-+..|
T Consensus 81 AP~v~~~~--g-------------~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~------~~~~--~~iD~~~f 137 (269)
T cd08986 81 APELHYIK--G-------------RWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN------KPLF--PGIDPSLF 137 (269)
T ss_pred CceEEEEC--C-------------EEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC------CCCC--CccCCceE
Confidence 99999987 6 89998886431 12233333323223456432110 0011 12446778
Q ss_pred eeCCCCcEEEE
Q 008189 316 FDSRKNRRILW 326 (574)
Q Consensus 316 ~~~~~gr~i~~ 326 (574)
.|. +|+..|+
T Consensus 138 ~D~-DG~~Yl~ 147 (269)
T cd08986 138 EDD-DGKVYLV 147 (269)
T ss_pred EcC-CCCEEEE
Confidence 874 6777776
No 52
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=98.33 E-value=1.2e-05 Score=81.52 Aligned_cols=151 Identities=12% Similarity=0.132 Sum_probs=97.0
Q ss_pred eeEEEC-CEEEEEEeeCCCCCCCCccEEEEeecCCcCC-ceecc-cccCCC--CCccCCCeEeeeEEEcCCCeeEEEEee
Q 008189 62 GPMYYK-GIYHLFYQYNPKGAVWGNIVWAHSVSKDLIN-WEALE-PALYPS--KPFDINGCWSGSATVLPGNKPIILYTG 136 (574)
Q Consensus 62 g~~~~~-G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~-W~~~~-~al~P~--~~~D~~gv~SGsav~~~dg~~~l~YTg 136 (574)
.+++.+ |+|+|||..... ..+....+.|+|+|+.. |++.. ..+.+. ...+...+..++++.+++|+++|+|.+
T Consensus 64 ~v~~~~~g~~~l~yt~~~~--~~~~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~~y~~~~~ 141 (286)
T cd08772 64 SIVYIENGKFYLYYTDVSF--TKNQQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGKWYLVFGS 141 (286)
T ss_pred eEEEcCCCCEEEEEEeecC--CCCceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCCEEEEEcc
Confidence 567777 999999987643 22456799999999974 56542 112222 122334578899988766999999987
Q ss_pred ecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC----CeeEEEEE
Q 008189 137 VDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK----HRGMAYLY 212 (574)
Q Consensus 137 ~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~----~~G~i~ly 212 (574)
........+.+|.|+|. .+|++....+++.... ....+.-|.++ + .+|+|||++++... ..-.+.++
T Consensus 142 ~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~-~-~~g~~yL~~s~~~~~~~~~~y~~~~~ 212 (286)
T cd08772 142 GDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL-K-KNGKYYLFYSINGTGRVDSTYSIGYA 212 (286)
T ss_pred ccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE-E-ECCEEEEEEEcCCCcCCCCCcceEEE
Confidence 64333456788998875 6887753222232221 23467889954 5 57999999987541 12356777
Q ss_pred EeCC-CCCCEEc
Q 008189 213 RSRD-FMKWTKA 223 (574)
Q Consensus 213 ~S~D-l~~W~~~ 223 (574)
+|++ +-.|+..
T Consensus 213 ~~~~~~g~~~~~ 224 (286)
T cd08772 213 RSESDTGPYVPK 224 (286)
T ss_pred EccCCCCCcccC
Confidence 7766 3456543
No 53
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=98.20 E-value=1.8e-05 Score=81.86 Aligned_cols=131 Identities=12% Similarity=0.040 Sum_probs=88.4
Q ss_pred eeEEEC-CEEEEEEeeCCCCCCCCccEEEEeecC-CcCCceecccc-cCCCCCccCCCeEeeeEEEcCCCeeEEEEeeec
Q 008189 62 GPMYYK-GIYHLFYQYNPKGAVWGNIVWAHSVSK-DLINWEALEPA-LYPSKPFDINGCWSGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~~-G~yHlfyq~~P~~~~~g~~~Wgha~S~-Dlv~W~~~~~a-l~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 138 (574)
.++..+ |+|+|||..+......+....++|+|+ |+++|+..+.. +.+....+..+.-.+.++.+ +|+++|+|++..
T Consensus 67 sav~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~~~~~~~~~~~~RDP~V~~~-~g~~~m~~g~~~ 145 (298)
T cd08996 67 SAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNPVIPPPDGYTTHFRDPKVFWH-DGKWYMVLGAGT 145 (298)
T ss_pred eEEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCceEcCCCCCCCcccCCeEEeE-CCEEEEEEEEEe
Confidence 445567 999999987643212245678999999 89999987532 22112223345678888875 699999999876
Q ss_pred CCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCC--CeEEEEEeeec
Q 008189 139 HKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSND--GHWRMLVGSRR 203 (574)
Q Consensus 139 ~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~--g~~~M~~g~~~ 203 (574)
........++.|+|. ++|+.. .++..... .....+.-|.+ ++ .+ ++|+|+++.+.
T Consensus 146 ~~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~~-~~~~~~EcP~l-~~-l~~~~k~vL~~s~~~ 202 (298)
T cd08996 146 EDGTGRILLYRSDDL-----KNWEYL--GELLTSLG-DFGYMWECPDL-FP-LDVEGKWVLIFSPQG 202 (298)
T ss_pred cCCCcEEEEEECCCC-----CCCEEc--ceecccCC-CccceEeCCcE-EE-ECCCCeEEEEECCCC
Confidence 544457778888884 899975 45532111 12246788985 44 46 99999998764
No 54
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.14 E-value=3.2e-05 Score=80.00 Aligned_cols=124 Identities=11% Similarity=0.163 Sum_probs=75.0
Q ss_pred cCccCCeeEEecCCCeEEEEEeeecCC----eeEEEEEEeCCCCCCEEcccccccCC---CCCccccceeEEeccCCCCc
Q 008189 179 SAFRDPTTAWWSNDGHWRMLVGSRRKH----RGMAYLYRSRDFMKWTKAKHPIHSLA---NTGMWECPDFYPVSISGKNG 251 (574)
Q Consensus 179 ~~fRDP~Vvw~~~~g~~~M~~g~~~~~----~G~i~ly~S~Dl~~W~~~~~~l~~~~---~~~~wEcPdlf~l~~~g~~~ 251 (574)
..+|||+|++.+.+|.|||+..+.... ...+.+|+|+||.+|+..+..+.... ......+|+++..+ |
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~--G--- 78 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK--G--- 78 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC--C---
Confidence 458999987765689999997654211 12378999999999998875443221 12356789999886 5
Q ss_pred cccccCCCCceEEEEEeecCCc----eeEEEEEEEeCCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEE
Q 008189 252 LDTSFAGGNEKFVLKVSLDLTR----YDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILW 326 (574)
Q Consensus 252 ~~~~~~~~~~k~vl~~s~~~~~----~~~Y~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~ 326 (574)
+|+|.++..... ...+.+.+ ...++|+..... .....+. ..-+..|.|. +|+..|+
T Consensus 79 ----------~yyly~s~~~~~~~~~~~~va~s~--~p~GP~~~~~~~------~~~~~~~~~iDp~~f~Dd-DG~~Yl~ 139 (291)
T cd08981 79 ----------RYYMFATFHNPGGERRGTAILVSD--SPEGPFVPHSDG------PVTPEDWMCLDGTLYVDE-DGKPWMV 139 (291)
T ss_pred ----------EEEEEEEeccCCCceeeEEEEECC--CCCCCCEeCCCC------ccCCCCCceEcCceEEcC-CCCEEEE
Confidence 899988764322 22333332 223455421100 0111122 3456678874 6888775
No 55
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=98.13 E-value=3.3e-05 Score=78.96 Aligned_cols=78 Identities=23% Similarity=0.389 Sum_probs=55.9
Q ss_pred CceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccC---------CCCCccc
Q 008189 167 NPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSL---------ANTGMWE 237 (574)
Q Consensus 167 ~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~---------~~~~~wE 237 (574)
||||. ..+.||.|+. .++.|||+.+..... ..+.+|+|+||.+|+..+..+... ..+++|
T Consensus 1 NPvi~-------~~~~DP~ii~--~~~~yY~~~t~~~~~-~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSIIR--AGDDYYMASSTFEWF-PGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEEE--ECCeEEEEECccccC-CCcEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 57763 3578999764 478999997653322 237899999999999987544221 123467
Q ss_pred cceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 238 CPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 238 cPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
+|+++.++ | ||+|.++..
T Consensus 70 AP~v~~~~--G-------------~yy~yy~~~ 87 (269)
T cd08989 70 APCLSYYD--G-------------KFWLIYTAV 87 (269)
T ss_pred cceEEEEC--C-------------EEEEEEecc
Confidence 99999986 6 899988864
No 56
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.12 E-value=8.4e-05 Score=76.53 Aligned_cols=147 Identities=12% Similarity=0.072 Sum_probs=89.6
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCc--CCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDL--INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dl--v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
.+.+.+|+|||||..+..+. .....++|+|+|+ -.|+..++++.+........+..++++.++||++||+|.+...
T Consensus 62 ~v~~~~g~yyl~ys~~~~~~--~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Yl~~~~~~~ 139 (288)
T cd08998 62 DVIYLNGKYYLYYSVSTFGS--NRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLWLSFGSFWG 139 (288)
T ss_pred eEEEECCEEEEEEEEEeCCC--CceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEEEEeeeccC
Confidence 56788999999998764332 3456899999998 7999987666554322234567888988778999999976421
Q ss_pred CCcceEEEEEe-cCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-C---Cee-EEEEEE
Q 008189 140 KERQVQNYAVP-ANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-K---HRG-MAYLYR 213 (574)
Q Consensus 140 ~~~~~q~lA~s-~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~---~~G-~i~ly~ 213 (574)
.+.++.. .|.+.+ ..+... ...++..+. .......|++ ++ .+|+|||++++.. . ..+ ++.+++
T Consensus 140 ----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~--~~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~~~y~v~~~~ 208 (288)
T cd08998 140 ----GIFLVELDPKTGKP--LYPGGY-GYNIAGRPR--GHGAIEAPYI-IY-RGGYYYLFVSYGGCCAGEDSTYNIRVGR 208 (288)
T ss_pred ----CEEEEEeCcccCCc--cCCCCc-ceEEeccCC--CCCceeeeEE-EE-eCCEEEEEEEcchhcCCCCCceEEEEEE
Confidence 2333332 332211 122110 011222221 1134578995 45 5899999987532 1 112 578999
Q ss_pred eCCCC-CCE
Q 008189 214 SRDFM-KWT 221 (574)
Q Consensus 214 S~Dl~-~W~ 221 (574)
|+++. -|+
T Consensus 209 s~~~~GP~~ 217 (288)
T cd08998 209 SKSITGPYV 217 (288)
T ss_pred cCCCCCCcC
Confidence 98864 355
No 57
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.11 E-value=0.00022 Score=72.68 Aligned_cols=142 Identities=12% Similarity=0.135 Sum_probs=89.0
Q ss_pred eeEEE--CCEEEEEEeeCCCCCCCCccEEEEeecCCcC-CceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeec
Q 008189 62 GPMYY--KGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~--~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 138 (574)
-++|. +|+|||||...... .+....|+|+|++.. -|+.++..+ |. ......+++++++||+.||+|.+..
T Consensus 69 ~v~y~~~~g~Y~m~~~~~~~~--~~~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Yl~~~~~~ 141 (265)
T cd08985 69 KVIYNAKTGKYVMWMHIDSSD--YSDARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAYLLYSDRD 141 (265)
T ss_pred eEEEeCCCCEEEEEEEeCCCC--CcceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEEEEEecCC
Confidence 45554 59999999987532 246689999999874 688776443 21 1345678898888899999998652
Q ss_pred CCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC-eeEEEEEEeCCC
Q 008189 139 HKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKH-RGMAYLYRSRDF 217 (574)
Q Consensus 139 ~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~-~G~i~ly~S~Dl 217 (574)
.....++.-++. +..+. +.+.... .......|. +++ .+|.|||+.+..... ...+..++|+++
T Consensus 142 ---~~~i~i~~L~~d----~~~~~---~~~~~~~----~~~~~EaP~-i~K-~~g~YYL~~S~~t~~~~~~~~y~~s~s~ 205 (265)
T cd08985 142 ---NSDLYIYRLTDD----YLSVT---GEVTTVF----VGAGREAPA-IFK-RNGKYYLLTSGLTGWNPNDARYATATSI 205 (265)
T ss_pred ---CCceEEEEeCCC----ccccc---ceEEEcc----CCCccccce-EEE-ECCEEEEEEccCCCccCCceEEEEecCC
Confidence 123445543321 23332 2333211 113567898 456 689999998765321 224677888886
Q ss_pred C-CCEEcccc
Q 008189 218 M-KWTKAKHP 226 (574)
Q Consensus 218 ~-~W~~~~~~ 226 (574)
. -|+..+.+
T Consensus 206 ~GP~~~~~~~ 215 (265)
T cd08985 206 LGPWTDLGNP 215 (265)
T ss_pred CCCccccCcC
Confidence 4 67766543
No 58
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=98.11 E-value=4.6e-05 Score=78.37 Aligned_cols=78 Identities=21% Similarity=0.434 Sum_probs=56.7
Q ss_pred CCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEec
Q 008189 166 NNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 166 ~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~ 245 (574)
.||||. ..+.||.|++ .++.|||+..+. +..+.+.+|+|+||.+|+..+..+ ....+.+| +|+++..+
T Consensus 7 ~nPv~~-------~~~~DP~i~~--~~~~yY~~~t~~-~~~~gi~i~~S~DL~~W~~~g~~~-~~~~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSILR--DGEDYYMTHSSF-KYTPGLVIWHSRDLVNWTPVGPAL-PEYEGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEEE--ECCEEEEEEcch-hcCCCEEEEECCCcCCceEccccc-cCCCCCEE-cCeeEEEC
Confidence 478885 2467999764 378999976542 222358899999999999987533 23345688 79999986
Q ss_pred cCCCCccccccCCCCceEEEEEeec
Q 008189 246 ISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 246 ~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
| ||+|.++..
T Consensus 75 --g-------------kyy~yys~~ 84 (280)
T cd09002 75 --G-------------RYYIYFPAI 84 (280)
T ss_pred --C-------------EEEEEEEee
Confidence 5 899988864
No 59
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.07 E-value=0.00023 Score=72.77 Aligned_cols=138 Identities=9% Similarity=0.055 Sum_probs=86.3
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcC-Ccee-cc-cccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeec
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEA-LE-PALYPSKPFDINGCWSGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~-~~-~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 138 (574)
.+++++|+|+|||..+ ...++|+|+|.. .|++ .+ +.+.+.. ......+++++.+.||+++|+|.+..
T Consensus 70 ~v~~~~g~yy~yys~~--------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~~~~~~ 139 (275)
T cd09004 70 SVIERNGKYYFYFSAN--------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLYWGGWG 139 (275)
T ss_pred eEEEECCEEEEEEEcC--------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEEEcCcC
Confidence 6788999999999865 358999999975 7887 33 3333321 12345678888877899999997531
Q ss_pred CCCcceEEE-EEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-C-CeeEEEEEEeC
Q 008189 139 HKERQVQNY-AVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-K-HRGMAYLYRSR 215 (574)
Q Consensus 139 ~~~~~~q~l-A~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~-~~G~i~ly~S~ 215 (574)
...+ ..+.|. .+|+.. ..++.... ...+.-|.+ ++ .+|+|||++++.. . ..-++.+++|+
T Consensus 140 -----~~~i~~l~~d~-----~~~~~~--~~~~~~~~---~~~~EgP~i-~k-~~G~yyl~ys~~~~~~~~Y~~~ya~s~ 202 (275)
T cd09004 140 -----HCNVAKLNEDM-----ISFDGE--RDGSEITP---KNYFEGPFM-FK-RNGIYYLMWSEGGWTDPDYHVAYAMAD 202 (275)
T ss_pred -----CEEEEEECCCc-----ccccCc--ceeeeccC---CCceecceE-EE-ECCEEEEEEECCCCCCCCceEEEEEcC
Confidence 1223 344443 556532 11221111 124578985 45 5899999988753 1 12257778888
Q ss_pred CCC-CCEEcccc
Q 008189 216 DFM-KWTKAKHP 226 (574)
Q Consensus 216 Dl~-~W~~~~~~ 226 (574)
++. -|+....+
T Consensus 203 ~~~GP~~~~~~~ 214 (275)
T cd09004 203 SPLGPFERPGNI 214 (275)
T ss_pred CCCCCcccCCcE
Confidence 864 48775533
No 60
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=97.96 E-value=0.00013 Score=74.68 Aligned_cols=151 Identities=12% Similarity=0.093 Sum_probs=92.6
Q ss_pred ceeeeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcC-CceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 59 WINGPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 59 w~Ng~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
|.-.+++.+|+|||||...... .....+.|+|++.. .|+..+....+ ...+..+++++++||+.||+|.+.
T Consensus 68 WAP~i~~~~g~yy~y~~~~~~~---~~~~~~va~a~~~~Gp~~~~~~~~~~-----~~~~iD~~vf~d~dG~~Yl~~~~~ 139 (286)
T PF04616_consen 68 WAPEIHYINGKYYMYYSDSGGD---AGSGIGVATADSPDGPWTDPGKIPIP-----GGNSIDPSVFVDDDGKYYLYYGSW 139 (286)
T ss_dssp EEEEEEEETTEEEEEEEEESTS---TTEEEEEEEESSTTS-EEEEEEEEEE-----SSSSSSEEEEEETTSEEEEEEEES
T ss_pred cCCeEEEcCCeEEEEEEccCCC---CCcceeEEEeCCcccccccccceeec-----cccccCceEEEecCCCcEEeCccc
Confidence 4445778899999999922111 23458889998885 99987654433 244677899988779999999986
Q ss_pred cCC-CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEEEEEeC
Q 008189 138 DHK-ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHRGMAYLYRSR 215 (574)
Q Consensus 138 ~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~G~i~ly~S~ 215 (574)
... ..+.+.++...+.. .++.......+.............-|++ ++ .+|+|||++++.. ...-++.+++|+
T Consensus 140 ~~~~~~~~i~~~~l~~d~----~~~~~~~~~~~~~~~~~~~~~~~Egp~~-~k-~~g~yYl~~s~~~~~~~y~v~~~~s~ 213 (286)
T PF04616_consen 140 DNGDPGGGIYIAELDPDG----TSLTGEPVVVIFPGDEGWDGGVVEGPFV-FK-HGGKYYLFYSAGGTGSPYQVGYARSD 213 (286)
T ss_dssp TTTSSEEEEEEEEEETTT----SSEEEEECEEEEEESGSSTTTBEEEEEE-EE-ETTEEEEEEEESGSSTTTEEEEEEES
T ss_pred CCCccceeEEeecccCcc----ccccCcccccccccccccCCccccceEE-EE-cCCCEEEEEeccCCCCCceEEEeecc
Confidence 532 23344555443321 3344321122223221222344567885 45 5899999998654 222357789999
Q ss_pred CCCC-CEEc
Q 008189 216 DFMK-WTKA 223 (574)
Q Consensus 216 Dl~~-W~~~ 223 (574)
++.. |+..
T Consensus 214 ~~~gp~~~~ 222 (286)
T PF04616_consen 214 SPLGPWEWK 222 (286)
T ss_dssp STTSGGEET
T ss_pred CCCCceeec
Confidence 9875 4543
No 61
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=97.89 E-value=0.0003 Score=74.10 Aligned_cols=152 Identities=16% Similarity=0.196 Sum_probs=95.0
Q ss_pred eeEEE-CCEEEEEEeeCCCCC---CCCccEEEEeecCCcC----CceecccccCCCCC-cc-------------CCCeEe
Q 008189 62 GPMYY-KGIYHLFYQYNPKGA---VWGNIVWAHSVSKDLI----NWEALEPALYPSKP-FD-------------INGCWS 119 (574)
Q Consensus 62 g~~~~-~G~yHlfyq~~P~~~---~~g~~~Wgha~S~Dlv----~W~~~~~al~P~~~-~D-------------~~gv~S 119 (574)
..++. +|+|||||-.+-... ..-....++++++|+. .|+.+...+.+++. |+ ....-.
T Consensus 75 sa~~~~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRD 154 (349)
T cd08997 75 SATLDDDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRD 154 (349)
T ss_pred eEEEeCCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCcccC
Confidence 33444 599999999874311 1235669999999984 45444445556542 21 122345
Q ss_pred eeEEEcC-CCeeEEEEeeecCCC---------------------------cceEEEEEecCCCCcccceeeccCCCceEe
Q 008189 120 GSATVLP-GNKPIILYTGVDHKE---------------------------RQVQNYAVPANPSDPYLRKWIKPDNNPVVF 171 (574)
Q Consensus 120 Gsav~~~-dg~~~l~YTg~~~~~---------------------------~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~ 171 (574)
+.++.++ +|+.||+++++.... .-.+++|++++. .+.+|+-+ .|++.
T Consensus 155 P~vf~d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~---dl~~W~~~--~PL~~ 229 (349)
T cd08997 155 PFVFEDPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKND---DLTEWKLL--PPLLE 229 (349)
T ss_pred CEEEecCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCC---CCCCcEEc--Ccccc
Confidence 6777764 588999999875421 124567777642 25789875 58886
Q ss_pred cCCCCCCcCccCCeeEEecCCCeEEEEEeeecC-------CeeEEEEEEeCCCC-CCEE
Q 008189 172 PGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK-------HRGMAYLYRSRDFM-KWTK 222 (574)
Q Consensus 172 ~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~-------~~G~i~ly~S~Dl~-~W~~ 222 (574)
+... ...+.+|.+ ++ .+|+|||+..++.. +...+..|.|++|. -|+.
T Consensus 230 a~~v--~d~~E~P~v-~~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~~ 284 (349)
T cd08997 230 ANGV--NDELERPHV-VF-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYKP 284 (349)
T ss_pred CCCc--CCceEcceE-EE-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCcc
Confidence 4321 245889995 45 59999999875542 11135667888874 4554
No 62
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=97.87 E-value=0.00016 Score=79.26 Aligned_cols=131 Identities=12% Similarity=0.104 Sum_probs=83.3
Q ss_pred eeEEECCEEEEEEeeCCCCCCC-CccEEEEeecCCcCCceecc-cccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVW-GNIVWAHSVSKDLINWEALE-PALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~-g~~~Wgha~S~Dlv~W~~~~-~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
..+..+|++||||..+.....+ ....-++|+|+|+.+|+..+ ++|.+.......+.-.+.++. .+|+++|++.+...
T Consensus 90 sav~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~~~~~fRDP~V~~-~~g~~~M~~g~~~~ 168 (445)
T TIGR01322 90 SAVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAGYTAHFRDPKVWK-HNGHWYMVIGAQTE 168 (445)
T ss_pred eEEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCCCcCcCCCCcEEe-ECCEEEEEEEEecC
Confidence 5556899999999986532222 22345689999999999876 455543221112344667765 48999999987643
Q ss_pred CCcceEEEEEecCCCCcccceeeccCCCceEecCC---CCCCcCccCCeeEEecCCCeEEEEEeee
Q 008189 140 KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGP---DVNASAFRDPTTAWWSNDGHWRMLVGSR 202 (574)
Q Consensus 140 ~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~---~~~~~~fRDP~Vvw~~~~g~~~M~~g~~ 202 (574)
.......+..|+| |++|+.. +++..+.. +.....|.-|-+ +. -+++|+|+++..
T Consensus 169 ~~~g~i~ly~S~D-----l~~W~~~--g~~~~~~~~~~~~~g~~~ECPdl-f~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 169 TEKGSILLYRSKD-----LKNWTFV--GEILGDGQNGLDDRGYMWECPDL-FS-LDGQDVLLFSPQ 225 (445)
T ss_pred CCceEEEEEECCC-----cccCeEe--cccccccccccCCccceEECCeE-EE-ECCcEEEEEecc
Confidence 3333446677766 4899985 45653320 111135778874 44 578999998754
No 63
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.74 E-value=0.0018 Score=66.24 Aligned_cols=130 Identities=11% Similarity=0.086 Sum_probs=79.9
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCc-CCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDL-INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHK 140 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dl-v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~ 140 (574)
.+++.+|+|||||-.+. .+.+.|+|++. =.|++++... ....++++.+.||+.||+|.+.
T Consensus 80 ~v~~~~gkyy~yys~~~-------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~~~--- 140 (269)
T cd09001 80 SLRYHNGTFYVFFCTNT-------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYGGG--- 140 (269)
T ss_pred ceEEECCEEEEEEEecC-------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeCCC---
Confidence 67888999999998751 13556777775 3787765322 2456788888889999999653
Q ss_pred CcceEEEE-EecCCCCcccceeeccCCCc-eEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCC
Q 008189 141 ERQVQNYA-VPANPSDPYLRKWIKPDNNP-VVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFM 218 (574)
Q Consensus 141 ~~~~q~lA-~s~D~~d~~l~~w~k~~~~P-vi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~ 218 (574)
.+.++ .+.|. ..... ..+ ++..+.. ......-|++ ++ .+|.|||++++.......+.+++|+++.
T Consensus 141 ---~i~~~~l~~d~-----~~~~~--~~~~~~~~~~~-~~~~~Egp~i-~k-~~G~YYl~~S~~~~~~~~~~~~~s~~~~ 207 (269)
T cd09001 141 ---TIRLVELSPDL-----TGVGG--KDQVIIDAGEE-IGLGAEGSHL-YK-INGYYYIFNIAWGGGGRTQTCLRSKSLT 207 (269)
T ss_pred ---cEEEEEECccc-----CCcCC--CceEEEeCCCc-cccccccCeE-EE-ECCEEEEEEecCCCCCceEEEEEeCCCC
Confidence 23444 33332 22211 223 3333221 1234578885 46 6899999988753222356788998865
Q ss_pred -CCEEc
Q 008189 219 -KWTKA 223 (574)
Q Consensus 219 -~W~~~ 223 (574)
-|+..
T Consensus 208 GP~~~~ 213 (269)
T cd09001 208 GPYESK 213 (269)
T ss_pred CCcCCc
Confidence 36543
No 64
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=97.68 E-value=0.00069 Score=73.94 Aligned_cols=153 Identities=25% Similarity=0.383 Sum_probs=88.1
Q ss_pred EEEeecCCcCCceecccccCCCC------C-ccCCCeEeeeEEEcCCCeeEEEEeeecCCC---cceEEEEEecCCCCcc
Q 008189 88 WAHSVSKDLINWEALEPALYPSK------P-FDINGCWSGSATVLPGNKPIILYTGVDHKE---RQVQNYAVPANPSDPY 157 (574)
Q Consensus 88 Wgha~S~Dlv~W~~~~~al~P~~------~-~D~~gv~SGsav~~~dg~~~l~YTg~~~~~---~~~q~lA~s~D~~d~~ 157 (574)
-.-+.|+||+||+.+...|.+.. . -+..|||.+++. ..||+++|+||...... .......++....+
T Consensus 55 l~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~-- 131 (549)
T COG3507 55 LAIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESID-- 131 (549)
T ss_pred eeeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCCC--
Confidence 34567999999999877666543 2 245789999987 58999999998765422 11112222222111
Q ss_pred cceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC------eeEEEEEEeC---CCCCCEEcccccc
Q 008189 158 LRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKH------RGMAYLYRSR---DFMKWTKAKHPIH 228 (574)
Q Consensus 158 l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~------~G~i~ly~S~---Dl~~W~~~~~~l~ 228 (574)
-.|.. |+.-+.. .--||.+++ +++|+-+|+.+..... .+.++-+.++ .|..+.+ + .+.
T Consensus 132 -G~WsD----pi~l~~~-----~~iDPslf~-D~dGr~wlv~~~w~~~~~~~~~~~i~l~~~~~~~~~l~g~~~-~-~~~ 198 (549)
T COG3507 132 -GPWSD----PIKLNGS-----NAIDPSLFF-DKDGRKWLVNGSWDGGIFMHSFAGIILQEYDKTTQKLVGQGY-K-IIF 198 (549)
T ss_pred -CCccc----ceecCCc-----CccCCceee-cCCCCEEEEecccCCCcccccccceeeeeccccccccCCccc-e-eEe
Confidence 35653 4442221 135999654 4789888898876421 1222222221 1223321 1 123
Q ss_pred cCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 229 SLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 229 ~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
.+......|-|-+++.+ | .++|+.+...
T Consensus 199 ~G~~~~~~EGPhl~k~~--g-------------YYYL~~a~gG 226 (549)
T COG3507 199 DGGNGGLTEGPHLYKKT--G-------------YYYLYVAEGG 226 (549)
T ss_pred ccCCCccccCceeeccC--C-------------EEEEEEEcCC
Confidence 33344578999888876 4 7777766544
No 65
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=97.66 E-value=0.0015 Score=67.12 Aligned_cols=141 Identities=11% Similarity=0.142 Sum_probs=82.6
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcC-C-----ceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEe
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-N-----WEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~-----W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YT 135 (574)
.+.+++|+|||||.....+. ....+|.|+|++.. - |+..++.+.+... +......+++++++||++||+|.
T Consensus 61 ~v~~~~G~yylyys~~~~~~--~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~~Yl~~g 137 (279)
T cd08988 61 DIYQHNGKFYLYYSVSAFGS--NTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQPWLSFG 137 (279)
T ss_pred eEEEECCEEEEEEEeccCCC--CCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCCEEEEec
Confidence 67889999999998765432 34578999999863 3 5543344433322 12345688999988899999996
Q ss_pred eecCCCcceEEEEEecCCCCcccceeeccCCC--ceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CCeeE
Q 008189 136 GVDHKERQVQNYAVPANPSDPYLRKWIKPDNN--PVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-----KHRGM 208 (574)
Q Consensus 136 g~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~--Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-----~~~G~ 208 (574)
.... + ....-.+.|.. .... .+. .++..+. +.....-|++ ++ .+|+|||++++.. +..-+
T Consensus 138 ~~~~-g--i~~~eL~~d~~-----~~~~-~~~~~~i~~~~~--~~~~~Egp~i-~k-~~g~YYl~~S~g~~~~~~~~~y~ 204 (279)
T cd08988 138 SFWG-G--IKLFELDKDTM-----KPAE-PGELHSIAGRER--SSAAIEAPFI-LY-RGDYYYLFVSFGLCCRGGDSTYK 204 (279)
T ss_pred ccCC-C--EEEEEECcccC-----CccC-CCcceEEeccCC--CCCceEeeEE-EE-cCCeEEEEEEcCcccCCCCCCeE
Confidence 5321 1 22223333321 1100 111 1222211 1134567884 56 5899999887542 12236
Q ss_pred EEEEEeCCCC
Q 008189 209 AYLYRSRDFM 218 (574)
Q Consensus 209 i~ly~S~Dl~ 218 (574)
+.+++|+++.
T Consensus 205 v~~arS~~~~ 214 (279)
T cd08988 205 IAVGRSKNIT 214 (279)
T ss_pred EEEEEeCCCC
Confidence 8899998874
No 66
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=97.65 E-value=0.003 Score=65.95 Aligned_cols=146 Identities=12% Similarity=0.083 Sum_probs=86.4
Q ss_pred eeEEEC----CEEEEEEeeCCCCCCCCccEEEEeecCCcC-Cceec-cccc-CCCC-Ccc-CCCeEeeeEEEcCCCeeEE
Q 008189 62 GPMYYK----GIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEAL-EPAL-YPSK-PFD-INGCWSGSATVLPGNKPII 132 (574)
Q Consensus 62 g~~~~~----G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~-~~al-~P~~-~~D-~~gv~SGsav~~~dg~~~l 132 (574)
.+++++ |+|+|||... ....+.|+|++.. .|+++ +..| .+.. ..+ ......+++++++||+.||
T Consensus 82 ~v~~~~~~~~gkyylyy~~~-------~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdDG~~Yl 154 (311)
T cd09003 82 SIAVKKINGKGKFYLYFANG-------GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDDGQGYL 154 (311)
T ss_pred ceEEeccCCCCEEEEEEecC-------CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCCCCEEE
Confidence 678888 9999999632 2358999999964 89975 3222 2211 111 1224678888888999999
Q ss_pred EEeeecC----CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----
Q 008189 133 LYTGVDH----KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR----- 203 (574)
Q Consensus 133 ~YTg~~~----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~----- 203 (574)
+|.+... ...+...+|..++. +.+. .+.++....+ ..+.-|++ ++ .+|.|||++++..
T Consensus 155 ~~g~~~~~~~~~~~~~i~i~~l~~D----~~~~---~g~~~~i~~~----~~~Egp~~-~K-~~G~YYL~ys~~~~~~~~ 221 (311)
T cd09003 155 YFGGGVPGGRWANPNTARVIKLGDD----MISV---DGSAVTIDAP----YFFEASGL-HK-INGTYYYSYCTNFGGRDP 221 (311)
T ss_pred EECCccCCCccccCCCEEEEEeCCC----ceec---cCCceEccCC----CceEeeeE-EE-ECCEEEEEEeCCCCccCC
Confidence 9975321 11133445544321 1222 2233332111 34678884 55 6999999987542
Q ss_pred --CCeeEEEEEEeCCCC-CCEEccccc
Q 008189 204 --KHRGMAYLYRSRDFM-KWTKAKHPI 227 (574)
Q Consensus 204 --~~~G~i~ly~S~Dl~-~W~~~~~~l 227 (574)
....++.+++|++.. -|+..+.++
T Consensus 222 ~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 222 GKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred CCCCceeEEEEEcCCCCCCcccCCEec
Confidence 223467777887754 587755433
No 67
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.64 E-value=0.0026 Score=65.45 Aligned_cols=151 Identities=15% Similarity=0.157 Sum_probs=83.1
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCC----cCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKD----LINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~D----lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
.+.+++|+|||||...-.+ .......+.++|++ +-.|++.+..+.+.. .....++++.+ +|++||+|.+.
T Consensus 59 ~i~~~~g~yylyys~~~~~-~~~~~~~~v~~a~~~~~~~Gpw~~~~~~~~~~~----~~~iDp~~~~d-dG~~Yl~~~~~ 132 (288)
T cd08980 59 ELHYIDGKWYIYFAAGDGG-GNANHRMYVLENAGADPPTGPWTFKGRLADPTD----RWAIDGTVFEH-NGQLYFVWSGW 132 (288)
T ss_pred eEEEECCEEEEEEEccCCC-CCcceeEEEEEeCCCCCCCCCceEeeEeccCCC----CeeeeeEEEEE-CCEEEEEEEcc
Confidence 5678899999999865432 11233455666653 568998765442221 34577888875 79999999875
Q ss_pred cC--CCcceEEEEEecCCCCcccceeeccCCCceE-ecC-CCCCC---cCccCCeeEEecCCCeEEEEEeeecC-Cee-E
Q 008189 138 DH--KERQVQNYAVPANPSDPYLRKWIKPDNNPVV-FPG-PDVNA---SAFRDPTTAWWSNDGHWRMLVGSRRK-HRG-M 208 (574)
Q Consensus 138 ~~--~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi-~~~-~~~~~---~~fRDP~Vvw~~~~g~~~M~~g~~~~-~~G-~ 208 (574)
.. .......++...+. .++. +.++. ..+ ..++. ....-|+++ + .+|.|||++++..- ... +
T Consensus 133 ~~~~~~~~~i~~~~l~~~-----~~~~---g~~~~i~~p~~~we~~~~~~~EgP~~~-k-~~G~yYl~yS~~~~~~~~Y~ 202 (288)
T cd08980 133 EGRTNGNQNLYIAKMSNP-----WTLT---GPRVLISRPEYDWERQGPGVNEGPAAL-K-RNGKVFLTYSASGSWTPDYC 202 (288)
T ss_pred CCCCCCCccEEEEECCCC-----CccC---CcceEecCCCCCceecCceeeECcEEE-E-ECCEEEEEEECCCCCCCCCE
Confidence 42 12233444544332 2332 23333 222 22221 124578854 4 47999999987542 111 4
Q ss_pred EEEEEeC---C-C--CCCEEcccccc
Q 008189 209 AYLYRSR---D-F--MKWTKAKHPIH 228 (574)
Q Consensus 209 i~ly~S~---D-l--~~W~~~~~~l~ 228 (574)
+.+++|+ + + ..|+..+.++.
T Consensus 203 v~~a~~~~~~~~~~~~~~~~~~~pil 228 (288)
T cd08980 203 LGLLTADGGADLLDPASWTKSPTPVF 228 (288)
T ss_pred EEEEEEcCCCCCCChhhCcCCCCCce
Confidence 5555554 2 2 23765444443
No 68
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=97.59 E-value=0.00051 Score=75.20 Aligned_cols=132 Identities=13% Similarity=0.151 Sum_probs=82.7
Q ss_pred eeEEECCEEEEEEeeCC-CCC--CCCcc-EEEEeecCCcCCceec--ccccCCCCCccCCCeEeeeEEEcCCCeeEEEEe
Q 008189 62 GPMYYKGIYHLFYQYNP-KGA--VWGNI-VWAHSVSKDLINWEAL--EPALYPSKPFDINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P-~~~--~~g~~-~Wgha~S~Dlv~W~~~--~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YT 135 (574)
.++..+|+|||||..+- ... ..... .-.+|+|+|+.+|+.. .++|.+...+.....-.+.++..++|+++|++.
T Consensus 73 sav~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g 152 (437)
T smart00640 73 SAVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIG 152 (437)
T ss_pred EEEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEE
Confidence 45567889999998763 211 12222 2367899999999997 356655432222334456666543469999998
Q ss_pred eecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCC-----eEEEEEeee
Q 008189 136 GVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDG-----HWRMLVGSR 202 (574)
Q Consensus 136 g~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g-----~~~M~~g~~ 202 (574)
+........+.+..|+| |++|+.. +++.....+.....|..|-. +. -++ +|+|+++.+
T Consensus 153 ~~~~~~~G~i~ly~S~D-----l~~W~~~--~~~~~~~~~~~g~~wECPdl-f~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 153 ASDEDKTGIALLYRSTD-----LKNWTLL--GELLHSGVGDTGGMWECPDL-FP-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred EEecCCCeEEEEEECCC-----cccCeEC--CcccccCCCCccceEECCcE-EE-eCCCCCceeEEEEECcC
Confidence 76544445677888877 4899875 45554311111146778874 33 344 899998876
No 69
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=97.57 E-value=0.00064 Score=69.08 Aligned_cols=103 Identities=16% Similarity=0.273 Sum_probs=79.5
Q ss_pred CeEeeeEEEcCCCeeEEEEeeec-----CCCcceEEEEEecCCCCcccce-eeccCCCceEec-CCCCCCcCccCCeeEE
Q 008189 116 GCWSGSATVLPGNKPIILYTGVD-----HKERQVQNYAVPANPSDPYLRK-WIKPDNNPVVFP-GPDVNASAFRDPTTAW 188 (574)
Q Consensus 116 gv~SGsav~~~dg~~~l~YTg~~-----~~~~~~q~lA~s~D~~d~~l~~-w~k~~~~Pvi~~-~~~~~~~~fRDP~Vvw 188 (574)
++|-++++. .++++.|+|-... ........+|.|+|+ .+ |++. .+|++.+ ...++.....||-|+
T Consensus 30 ~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e-~ep~~~P~~~~~e~~G~EDPRvt- 101 (314)
T COG2152 30 SVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIE-PEPTLWPANYPYEIYGIEDPRVT- 101 (314)
T ss_pred EEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecC-CcceEecCCCchhhhcccCceEE-
Confidence 689998887 4899999888732 234567789999987 55 9987 4798876 334566788999965
Q ss_pred ecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEccccc
Q 008189 189 WSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPI 227 (574)
Q Consensus 189 ~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l 227 (574)
+ .+++|+|.+.+..+.+.+..+..+.|+.+|++.+..+
T Consensus 102 ~-I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~ 139 (314)
T COG2152 102 K-IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIF 139 (314)
T ss_pred E-ECCEEEEEEEecCCCCcccchhhhhhhhhhhhccccc
Confidence 4 5899999999986555577899999999999987543
No 70
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=97.35 E-value=0.017 Score=58.60 Aligned_cols=167 Identities=19% Similarity=0.250 Sum_probs=95.0
Q ss_pred CCcee-eeEEE-CCEEEEEEeeCCCCCCCCccEEEEeecCC-cCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEE
Q 008189 57 KHWIN-GPMYY-KGIYHLFYQYNPKGAVWGNIVWAHSVSKD-LINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIIL 133 (574)
Q Consensus 57 ~gw~N-g~~~~-~G~yHlfyq~~P~~~~~g~~~Wgha~S~D-lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~ 133 (574)
..+.| -+++. +|+.||||........|......+.+|+| +.+|+... .|.++......+...+.++...+|++++-
T Consensus 46 ~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~~~~~~i~~~~G~l~~~ 124 (275)
T PF13088_consen 46 RRYGNPSLVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGPGRGPPIQLPDGRLIAP 124 (275)
T ss_dssp CEEEEEEEEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEECSEEEEEEECTTEEEEE
T ss_pred CcccCcEEEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccceeccceeeeeEecCCCEEEE
Confidence 34555 44543 99999999666555444444555589999 79999764 23222111223344554455568887764
Q ss_pred -EeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEE
Q 008189 134 -YTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLY 212 (574)
Q Consensus 134 -YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly 212 (574)
|.. . .......+.+|.|++ ++|+... ++. .....--|.++.. .+|..+|++... . .+.+.++
T Consensus 125 ~~~~-~-~~~~~~~~~~S~D~G----~tW~~~~--~~~------~~~~~~e~~~~~~-~dG~l~~~~R~~-~-~~~~~~~ 187 (275)
T PF13088_consen 125 YYHE-S-GGSFSAFVYYSDDGG----KTWSSGS--PIP------DGQGECEPSIVEL-PDGRLLAVFRTE-G-NDDIYIS 187 (275)
T ss_dssp EEEE-S-SCEEEEEEEEESSTT----SSEEEEE--ECE------CSEEEEEEEEEEE-TTSEEEEEEEEC-S-STEEEEE
T ss_pred Eeec-c-ccCcceEEEEeCCCC----ceeeccc--ccc------ccCCcceeEEEEC-CCCcEEEEEEcc-C-CCcEEEE
Confidence 433 1 233566778999986 8998742 221 0112334554333 688888887654 2 1267788
Q ss_pred EeCC-CCCCEEcccccccCCCCCccccceeEEec
Q 008189 213 RSRD-FMKWTKAKHPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 213 ~S~D-l~~W~~~~~~l~~~~~~~~wEcPdlf~l~ 245 (574)
.|.| +.+|+... +... ...-.++.++++.
T Consensus 188 ~S~D~G~TWs~~~-~~~~---~~~~~~~~~~~~~ 217 (275)
T PF13088_consen 188 RSTDGGRTWSPPQ-PTNL---PNPNSSISLVRLS 217 (275)
T ss_dssp EESSTTSS-EEEE-EEEC---SSCCEEEEEEECT
T ss_pred EECCCCCcCCCce-eccc---CcccCCceEEEcC
Confidence 8877 78998642 1111 1112456666765
No 71
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.26 E-value=0.012 Score=60.53 Aligned_cols=139 Identities=14% Similarity=0.030 Sum_probs=83.8
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCc-CCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDL-INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHK 140 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dl-v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~ 140 (574)
.+++++|+|||||...... +....+.++|+|. --|++.. +.+. .+..++++.++||+.||+|......
T Consensus 72 ~v~~~~g~yy~yy~~~~~~---~~~~~~v~~s~~p~gpw~~~~--~~~~------~~iDp~vf~d~dG~~Y~~~~~~~~~ 140 (288)
T cd09000 72 TIRYHDGTFYLITTNVDGM---KDGGNFIVTADDPAGPWSDPV--WLDS------GGIDPSLFFDDDGKVYLVGNGWDER 140 (288)
T ss_pred eEEEECCEEEEEEEecCCC---CCCceEEEEeCCCCCCCcCCE--ecCC------CccCCceeEcCCCCEEEEecccCCc
Confidence 6788899999999876532 2335667888887 4787422 2221 4567888887789999988654321
Q ss_pred ----CcceEEEEEecCCCCcccceeeccCCCc--eEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEEEEE
Q 008189 141 ----ERQVQNYAVPANPSDPYLRKWIKPDNNP--VVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHRGMAYLYR 213 (574)
Q Consensus 141 ----~~~~q~lA~s~D~~d~~l~~w~k~~~~P--vi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~G~i~ly~ 213 (574)
+...+.++..+. ..++-. +.| +..... .....-|.| ++ .+|+|||++.... ...-++.+++
T Consensus 141 ~~~~~~~~i~~~~l~~------~~~~~~-~~~~~~~~~~~---~~~~Egp~v-~k-~~g~YYl~ys~~~~~~~~~v~~~~ 208 (288)
T cd09000 141 RGYNGHGGIWLQEIDL------ETGKLL-GEPKVIWNGTG---GRWPEGPHL-YK-RDGWYYLLIAEGGTGYGHSVTVAR 208 (288)
T ss_pred cccCCCCcEEEEEEcc------ccCCCC-CCcEEEEeCCC---CCCcccCeE-EE-ECCEEEEEEecCCCCCCeEEEEEE
Confidence 123445554322 122221 223 222111 134467885 56 6899999986543 2223678999
Q ss_pred eCCCC-CCEEc
Q 008189 214 SRDFM-KWTKA 223 (574)
Q Consensus 214 S~Dl~-~W~~~ 223 (574)
|+++. -|+..
T Consensus 209 s~~~~Gp~~~~ 219 (288)
T cd09000 209 SRSITGPYEPA 219 (288)
T ss_pred eCCCCCCCccC
Confidence 99986 67653
No 72
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=97.14 E-value=0.041 Score=58.04 Aligned_cols=164 Identities=18% Similarity=0.200 Sum_probs=97.9
Q ss_pred CcccccceeecC----CCcee-eeEEEC-CEEEEEEeeCCCCC-------CCCccEEEEeecCCc-CCceecccccCCCC
Q 008189 45 QLHRTAFHFQPP----KHWIN-GPMYYK-GIYHLFYQYNPKGA-------VWGNIVWAHSVSKDL-INWEALEPALYPSK 110 (574)
Q Consensus 45 ~~~RP~~H~~p~----~gw~N-g~~~~~-G~yHlfyq~~P~~~-------~~g~~~Wgha~S~Dl-v~W~~~~~al~P~~ 110 (574)
..|.+.--+... ...+| .++... |+.+|||...+... .+...+..+..|+|. .+|.. |..|.+..
T Consensus 58 ~tW~~~~~i~~~~~~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~-p~~l~~~~ 136 (351)
T cd00260 58 KTWSPSTVISDGDGKSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSS-PRDLTPSV 136 (351)
T ss_pred CcccccEEehhcCCCCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecC-CccCCccc
Confidence 466665333333 34566 667776 99999998887642 123556778888886 89985 33343332
Q ss_pred C-ccCCCeE--eeeEEEcCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeE
Q 008189 111 P-FDINGCW--SGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTA 187 (574)
Q Consensus 111 ~-~D~~gv~--SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vv 187 (574)
. .+....+ .|+.++..+|++++.+.+....+.....+.+|+|.| ++|+... +. . + ......|.++
T Consensus 137 ~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~-~-~----~~~~~e~~i~ 204 (351)
T cd00260 137 KGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV-N-D----AGGCSECSVV 204 (351)
T ss_pred cCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC-C-C----CCCCcCCEEE
Confidence 1 0111222 233455567888775544433334566778898875 8997632 11 1 1 1234567765
Q ss_pred EecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEcc
Q 008189 188 WWSNDGHWRMLVGSRRKHRGMAYLYRSRD-FMKWTKAK 224 (574)
Q Consensus 188 w~~~~g~~~M~~g~~~~~~G~i~ly~S~D-l~~W~~~~ 224 (574)
-. .+|..+|+..... .+.+.+|.|.| +..|+...
T Consensus 205 el-~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~~ 239 (351)
T cd00260 205 EL-SDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEAL 239 (351)
T ss_pred Ee-cCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccCc
Confidence 33 5888888776543 35567888877 58998643
No 73
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=97.06 E-value=0.054 Score=53.58 Aligned_cols=184 Identities=17% Similarity=0.289 Sum_probs=100.3
Q ss_pred eecCCCcee----eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEE-cCC
Q 008189 53 FQPPKHWIN----GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATV-LPG 127 (574)
Q Consensus 53 ~~p~~gw~N----g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~-~~d 127 (574)
..|..||.. -.+++||+||+|....-.+.. ||...=.-+-+|.+...|-.- .-+ .+.-.+.++. .+.
T Consensus 16 ~~Pk~g~~slKD~T~V~ynGk~~VyAtt~d~~~~-----y~sm~f~~Ftdws~~~sA~q~--~m~-~~~vAP~vFYFaPk 87 (271)
T PF03664_consen 16 AQPKSGWVSLKDFTIVPYNGKHHVYATTADTGGG-----YGSMNFGPFTDWSQMASASQN--YMD-QSAVAPQVFYFAPK 87 (271)
T ss_pred ccCCCCceeccCceEEeECCEEEEEEEeccCCCc-----cceEeeeccCCHHHhhccccc--cCC-cccccceEEEecCC
Confidence 346678988 778899999999987754444 443333345578776543221 112 1222233322 256
Q ss_pred CeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCee
Q 008189 128 NKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRG 207 (574)
Q Consensus 128 g~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G 207 (574)
+.+||.|--.. ..-...++.|.+++ ..|... .|++...-.......-|..|+-+ +..-||+.+.. .|
T Consensus 88 ~~W~L~yQwg~----~~fsY~Ts~Dptnp--ngWSap--q~lf~g~i~~~~~g~iD~~vI~D--~~n~yLFfa~D---nG 154 (271)
T PF03664_consen 88 NIWYLAYQWGP----AAFSYSTSSDPTNP--NGWSAP--QPLFSGSISGSGTGPIDQWVICD--DTNMYLFFAGD---NG 154 (271)
T ss_pred cEEEEEEecCC----CcceeecCCCCCCC--ccCCCC--cccccccccCCCCCceeeEEEec--CCceEEEEcCC---CC
Confidence 77888886321 11123456777666 468763 56653211111244578887643 33445554432 25
Q ss_pred EEEEEEeCC-CCCCEE----cccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCC
Q 008189 208 MAYLYRSRD-FMKWTK----AKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLT 272 (574)
Q Consensus 208 ~i~ly~S~D-l~~W~~----~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~ 272 (574)
+ ||+|.- +.+.-. ....+.+......+|.++++++. | ..++.|++-..+.
T Consensus 155 k--iYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~--G-----------~~~YLmiVEaiGs 209 (271)
T PF03664_consen 155 K--IYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVK--G-----------QNQYLMIVEAIGS 209 (271)
T ss_pred c--EEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEc--C-----------CceEEEEEEEecC
Confidence 4 788743 222210 00112222334589999999997 5 2378888776443
No 74
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=96.98 E-value=0.24 Score=50.08 Aligned_cols=161 Identities=15% Similarity=0.095 Sum_probs=86.4
Q ss_pred CEEEEEEeeCCCCCCCCccEEEEeec--CCc-CCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCC---C
Q 008189 68 GIYHLFYQYNPKGAVWGNIVWAHSVS--KDL-INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHK---E 141 (574)
Q Consensus 68 G~yHlfyq~~P~~~~~g~~~Wgha~S--~Dl-v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~---~ 141 (574)
|+...++.. +...+.....-..| +|. .+|.....+..+. . ....+..++++.+.+|+++|||+..... .
T Consensus 1 G~l~a~~~~---~~~~~~~d~~i~~S~s~D~G~tWs~~~~v~~~~-~-~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~ 75 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEGAIDIVIRRSRSTDGGKTWSEPRIVADGP-K-PGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWS 75 (275)
T ss_dssp SEEEEEEEE---SSCSCCEEEEEEEECCCCCTTEEEEEEEEETST-B-TTCEEEEEEEEEETTSEEEEEEEEEETTESCC
T ss_pred CeEEEEEEC---CcccCCCCEEEEEEEeeCCCCeeCCCEEEeecc-c-cCCcccCcEEEEeCCCCEEEEEEEccCCCCCC
Confidence 556666665 33334445555555 987 8999864444333 1 1245677777776799999999554332 1
Q ss_pred cceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEe-CCCCCC
Q 008189 142 RQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRS-RDFMKW 220 (574)
Q Consensus 142 ~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S-~Dl~~W 220 (574)
.......+|.|+| ++|.... .|...+........+.+- +-. .+|.+++..-........+.++.| +.++.|
T Consensus 76 ~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~-i~~-~~G~l~~~~~~~~~~~~~~~~~~S~D~G~tW 147 (275)
T PF13088_consen 76 GSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPP-IQL-PDGRLIAPYYHESGGSFSAFVYYSDDGGKTW 147 (275)
T ss_dssp TCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEE-EEE-CTTEEEEEEEEESSCEEEEEEEEESSTTSSE
T ss_pred ceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeee-eEe-cCCCEEEEEeeccccCcceEEEEeCCCCcee
Confidence 1222248999976 8999742 232221111122234433 223 478777663222222344555555 557899
Q ss_pred EEcccccccCCCCCccccceeEEec
Q 008189 221 TKAKHPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 221 ~~~~~~l~~~~~~~~wEcPdlf~l~ 245 (574)
+.... .. .....-.|.++++.
T Consensus 148 ~~~~~-~~---~~~~~~e~~~~~~~ 168 (275)
T PF13088_consen 148 SSGSP-IP---DGQGECEPSIVELP 168 (275)
T ss_dssp EEEEE-CE---CSEEEEEEEEEEET
T ss_pred ecccc-cc---ccCCcceeEEEECC
Confidence 87643 21 11122236677776
No 75
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=96.80 E-value=0.046 Score=55.95 Aligned_cols=140 Identities=13% Similarity=0.205 Sum_probs=79.2
Q ss_pred eeEEE--CCEEEEEEeeCCCCCCCCccEEEEeecCCc---CCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEee
Q 008189 62 GPMYY--KGIYHLFYQYNPKGAVWGNIVWAHSVSKDL---INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTG 136 (574)
Q Consensus 62 g~~~~--~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dl---v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg 136 (574)
-++|+ +++|+|+||+. +...+||+|. ..|....+.+.........+...-.+ +.+|+++|||+.+
T Consensus 82 qVfyf~pk~kwYL~Yq~~---------~~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YLff~~ 151 (303)
T cd08987 82 QVFYFAPQNKWYLIYQWW---------PAAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYLFFSD 151 (303)
T ss_pred EEeeeccCCEEEEEEecC---------ceEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEEEEec
Confidence 46655 59999999973 2568999996 47876544433222112234455555 5568999999987
Q ss_pred ecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCC--eEEEEEeeecCCeeE-EEEEE
Q 008189 137 VDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDG--HWRMLVGSRRKHRGM-AYLYR 213 (574)
Q Consensus 137 ~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g--~~~M~~g~~~~~~G~-i~ly~ 213 (574)
-+. .+..|....+ .|-....+++.....+-...-|.-|.| ++ .+| +|+|++-+.....++ ..-++
T Consensus 152 dnG----~iyra~~~~~------nFp~~~~~~~~~~~~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~rYfrs~T 219 (303)
T cd08987 152 DNG----KLYRSSTTLG------NFPNGGTETVIIMSDSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGGRYFRSWT 219 (303)
T ss_pred CCC----eEEEEecchh------hCCCCCCccEEEecCCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCCCeEEEEE
Confidence 542 4444543321 122211233332111111255778885 55 455 999999876521121 12366
Q ss_pred eCCCC-CCEEc
Q 008189 214 SRDFM-KWTKA 223 (574)
Q Consensus 214 S~Dl~-~W~~~ 223 (574)
|+.|. .|+..
T Consensus 220 s~Sl~GpWt~~ 230 (303)
T cd08987 220 ATSLDGPWTPL 230 (303)
T ss_pred cCCCCCCceec
Confidence 77764 78865
No 76
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=96.23 E-value=0.11 Score=54.19 Aligned_cols=127 Identities=15% Similarity=0.178 Sum_probs=76.6
Q ss_pred eeEEEcCCCeeEEEEeeecCC---CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEE
Q 008189 120 GSATVLPGNKPIILYTGVDHK---ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWR 196 (574)
Q Consensus 120 Gsav~~~dg~~~l~YTg~~~~---~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~ 196 (574)
++.++-.+|+++|||--+... +...-+.|+|+| |++|+.. .++|.+...++....--..++.. ++.++
T Consensus 12 PnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~--~~aL~P~~~~d~~g~~SGs~~~~--~~~~~ 82 (308)
T PF00251_consen 12 PNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKD-----LVHWEHL--PVALPPDEEYDADGCFSGSAVVD--DDNLV 82 (308)
T ss_dssp EEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESS-----SSSEEEE--EEEE-SSSGGGTTEEEEEEEEEE--TTCEE
T ss_pred CccCeEeCCEEEEEeccCCCCcccceeEEEEEECCC-----CCCceeC--CceEcccccCCcCccCcceEEEE--CCEEE
Confidence 333344699999999766431 345668999999 4899986 36665543322222223333333 44788
Q ss_pred EEEeeecC-CeeEEEEEEe-CCCCCCEEcc--cccccC---CCCCccccceeEEeccCCCCccccccCCCCceEEEEEee
Q 008189 197 MLVGSRRK-HRGMAYLYRS-RDFMKWTKAK--HPIHSL---ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSL 269 (574)
Q Consensus 197 M~~g~~~~-~~G~i~ly~S-~Dl~~W~~~~--~~l~~~---~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 269 (574)
|++.+... ......++.| +|+.+|+... .++... .....|-=|.+|...+ + +|+|++..
T Consensus 83 ~~YTg~~~~~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~~-~-------------~~~m~~g~ 148 (308)
T PF00251_consen 83 LFYTGNNRDGKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWRED-G-------------RWYMLLGA 148 (308)
T ss_dssp EEEEEEETTTEEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEECT-T-------------EEEEEEEE
T ss_pred EEEeccCCCCCeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEecC-C-------------EEEEEEec
Confidence 88776543 2445667777 8899999854 455432 2234577788865542 3 88887764
No 77
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=94.87 E-value=6 Score=41.54 Aligned_cols=168 Identities=14% Similarity=0.119 Sum_probs=92.9
Q ss_pred eEEECCEEEEEEeeCCCC-CCCC-ccEEEEeecCCc-CCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 63 PMYYKGIYHLFYQYNPKG-AVWG-NIVWAHSVSKDL-INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 63 ~~~~~G~yHlfyq~~P~~-~~~g-~~~Wgha~S~Dl-v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
++...+..-.|+-....+ ...+ .+....+.|+|. .+|.... ++..... ....++.++.+.+.+|+++|||.....
T Consensus 21 l~~~~~~lla~~e~r~~~~~D~~~~~~iv~~~S~D~G~tW~~~~-~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~ 98 (351)
T cd00260 21 LVCTPGTLLAFADARYGGCSDRSNAIDIVARRSTDGGKTWSPST-VISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPN 98 (351)
T ss_pred EEEECCEEEEEEEEEEcCCCCCCcccceeEEEeccCCCcccccE-EehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCC
Confidence 444445555555433222 2334 567888888885 8999853 3333322 234577888887644899999977643
Q ss_pred C----------CcceEEEEEecCCCCcccceeeccCCCceEecC--CCCCCcCccCC--eeEEecCCCeEEEEEeeecCC
Q 008189 140 K----------ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPG--PDVNASAFRDP--TTAWWSNDGHWRMLVGSRRKH 205 (574)
Q Consensus 140 ~----------~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~--~~~~~~~fRDP--~Vvw~~~~g~~~M~~g~~~~~ 205 (574)
. ......+..|.|.| ++|.+. ..+.... ..+ ...++-| -+. . .+|.++|.+-.....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~S~D~G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~-l-~~Grlv~p~~~~~~~ 169 (351)
T cd00260 99 GEGEDNDYAGPSNAYLVLVYSDDDG----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQ-M-KDGRLVFPVYGGNAG 169 (351)
T ss_pred cccccccccCCCceEEEEEEEEcCC----ceecCC--ccCCccccCcce-eEEEecCcCeEE-e-cCCcEEEEEEEEcCC
Confidence 1 23456788998875 899863 2222211 111 1122333 222 2 468877665444322
Q ss_pred --eeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEec
Q 008189 206 --RGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 206 --~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~ 245 (574)
.-...+|..+++++|+.. .... ....+.| |.++++.
T Consensus 170 ~~~~~~~~~S~D~G~tW~~~-~~~~--~~~~~~e-~~i~el~ 207 (351)
T cd00260 170 GRVSSAIIYSDDSGKTWKLG-EGVN--DAGGCSE-CSVVELS 207 (351)
T ss_pred CCEEEEEEEECCCCCCcEEC-CCCC--CCCCCcC-CEEEEec
Confidence 223445555667999864 3221 1133455 7799996
No 78
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=94.80 E-value=0.3 Score=50.61 Aligned_cols=79 Identities=11% Similarity=0.135 Sum_probs=46.6
Q ss_pred CeEeeeEEEcCCCeeEEEEeeecCC-CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCe
Q 008189 116 GCWSGSATVLPGNKPIILYTGVDHK-ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGH 194 (574)
Q Consensus 116 gv~SGsav~~~dg~~~l~YTg~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~ 194 (574)
++.-|..+...+|++||+|++.... ..-.+.+|+|++.- -.|++...+||+..+.+. ...--...+ +...+|.
T Consensus 159 ~~~EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p~----GP~~~~~~~pil~~~~~~-~~g~GH~s~-v~~~~G~ 232 (295)
T cd08982 159 PWMEGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSPL----GPFTYQPHNPFSYKPGGF-ITGAGHGST-FQDKYGN 232 (295)
T ss_pred ccccccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCCC----CCCCcCCCCccccCCCCe-EecCCcccE-EECCCCC
Confidence 3556666666799999999864322 22246788887764 456665568887543220 011122233 3446788
Q ss_pred EEEEEe
Q 008189 195 WRMLVG 200 (574)
Q Consensus 195 ~~M~~g 200 (574)
|++++=
T Consensus 233 ~~~~yh 238 (295)
T cd08982 233 YWHVGT 238 (295)
T ss_pred EEEEEE
Confidence 887753
No 79
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=92.66 E-value=1.5 Score=48.52 Aligned_cols=141 Identities=13% Similarity=0.123 Sum_probs=74.5
Q ss_pred eeEEECCEEEEEEeeCCCCC-CCCccEEEEeecCC-cCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPKGA-VWGNIVWAHSVSKD-LINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~-~~g~~~Wgha~S~D-lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
.++|+||+|+|+|---+... .+.+++--..+.++ .=.|.+. +-+. . ...+.+|...|+||+.+|+|-+++.
T Consensus 95 dl~y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~G~WsDp-i~l~-~-----~~~iDPslf~D~dGr~wlv~~~w~~ 167 (549)
T COG3507 95 DLSYHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESIDGPWSDP-IKLN-G-----SNAIDPSLFFDKDGRKWLVNGSWDG 167 (549)
T ss_pred ceecCCCcEEEEEecccccCCcccccccEEEEecCCCCCcccc-eecC-C-----cCccCCceeecCCCCEEEEecccCC
Confidence 67889999999995443322 23344433344333 2367652 2221 1 1256788988999999999998874
Q ss_pred CC--cceEEEEEecCCCCcccceeeccCCC--ceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCee-EEEEEE
Q 008189 140 KE--RQVQNYAVPANPSDPYLRKWIKPDNN--PVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHRG-MAYLYR 213 (574)
Q Consensus 140 ~~--~~~q~lA~s~D~~d~~l~~w~k~~~~--Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~G-~i~ly~ 213 (574)
.. ...-.+-.+... .+=.|..+. .++-. +.+...-.-|. +++ ++|.|||+++.+. ...| .+.++|
T Consensus 168 ~~~~~~~~~i~l~~~~-----~~~~~l~g~~~~~~~~--G~~~~~~EGPh-l~k-~~gYYYL~~a~gG~t~~gh~~~vaR 238 (549)
T COG3507 168 GIFMHSFAGIILQEYD-----KTTQKLVGQGYKIIFD--GGNGGLTEGPH-LYK-KTGYYYLYVAEGGLTTYGHAIRVAR 238 (549)
T ss_pred Ccccccccceeeeecc-----ccccccCCccceeEec--cCCCccccCce-eec-cCCEEEEEEEcCCCCccceeEEEEe
Confidence 21 111111121111 011122111 11211 11112334675 555 7888998877543 3233 578999
Q ss_pred eCCCC
Q 008189 214 SRDFM 218 (574)
Q Consensus 214 S~Dl~ 218 (574)
|+.+.
T Consensus 239 SKsid 243 (549)
T COG3507 239 SKSID 243 (549)
T ss_pred ccCCC
Confidence 98764
No 80
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=92.00 E-value=0.93 Score=47.38 Aligned_cols=140 Identities=19% Similarity=0.353 Sum_probs=69.6
Q ss_pred eEEECCEEEEEE-eeCCCCCCCCccEEE--EeecCCc-CCceecccccCCC-CCccCCCeE--eeeEEEcCCCeeEEEEe
Q 008189 63 PMYYKGIYHLFY-QYNPKGAVWGNIVWA--HSVSKDL-INWEALEPALYPS-KPFDINGCW--SGSATVLPGNKPIILYT 135 (574)
Q Consensus 63 ~~~~~G~yHlfy-q~~P~~~~~g~~~Wg--ha~S~Dl-v~W~~~~~al~P~-~~~D~~gv~--SGsav~~~dg~~~l~YT 135 (574)
.+..++..+|+- .|+... +...|+ ++.|+|- +.|.+........ +... ..+ -||-|+.+||++++=-.
T Consensus 65 tvvkgn~IymLvG~y~~~~---~~~~~~llLvks~~~g~~W~~~~~l~~~~~~~~~--~figgGGSGV~m~dGTLVFPv~ 139 (310)
T PF13859_consen 65 TVVKGNKIYMLVGSYSRSA---GADDWGLLLVKSTDGGIKWGDTKSLPSTSFQSWK--QFIGGGGSGVVMEDGTLVFPVQ 139 (310)
T ss_dssp EEEETTEEEEEEEEESS-----SSTTEEEEEEEEESSSSEE---EE-GGGS-EEEE--EEEE-SEE-EE-TTS-EEEEEE
T ss_pred eeecceeEEEEEEEEeccc---cccccceeeeeccCCcceeeecccCCchhccccc--eeecCCCCceEEcCCCEEEEEe
Confidence 344567777776 344221 222343 5566664 6898753221111 1111 111 14445557999877666
Q ss_pred eecCCCc-ceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEe
Q 008189 136 GVDHKER-QVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRS 214 (574)
Q Consensus 136 g~~~~~~-~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S 214 (574)
+...... ....|.+|+|.+ .+|+-..+ ......+||.|+-. ++|+-.|+..... |+-.+|+|
T Consensus 140 a~~~~~~~~~SlIiYS~d~g----~~W~lskg---------~s~~gC~~psv~EW-e~gkLlM~~~c~~---g~rrVYeS 202 (310)
T PF13859_consen 140 ATKKNGDGTVSLIIYSTDDG----KTWKLSKG---------MSPAGCSDPSVVEW-EDGKLLMMTACDD---GRRRVYES 202 (310)
T ss_dssp EEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE--TTEEEEEEE-TT---S---EEEE
T ss_pred eeccCccceEEEEEEECCCc----cceEeccc---------cCCCCcceEEEEec-cCCeeEEEEeccc---ceEEEEEE
Confidence 6655544 367789999865 78975321 11246789998744 5789888866532 45578999
Q ss_pred CCC-CCCEEcc
Q 008189 215 RDF-MKWTKAK 224 (574)
Q Consensus 215 ~Dl-~~W~~~~ 224 (574)
.|. ..|+..-
T Consensus 203 ~DmG~tWtea~ 213 (310)
T PF13859_consen 203 GDMGTTWTEAL 213 (310)
T ss_dssp SSTTSS-EE-T
T ss_pred cccceehhhcc
Confidence 885 7899743
No 81
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=85.43 E-value=5.8 Score=38.76 Aligned_cols=104 Identities=21% Similarity=0.330 Sum_probs=62.3
Q ss_pred eEEECC-EEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccC-CCCCccCCCeE--eeeEEEcCCCeeEEEEeeec
Q 008189 63 PMYYKG-IYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALY-PSKPFDINGCW--SGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 63 ~~~~~G-~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~-P~~~~D~~gv~--SGsav~~~dg~~~l~YTg~~ 138 (574)
.++++| .|+++-|..|.-. |+..+..|.-.+-.+-+-.|+-|. |.-+|+..|.| -|-||+.++|+..+-|++..
T Consensus 137 tfeh~gk~yyvwaqkdp~i~--gnsniyiaemenpwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ysasa 214 (324)
T COG3940 137 TFEHNGKLYYVWAQKDPNIK--GNSNIYIAEMENPWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYSASA 214 (324)
T ss_pred eeeeCCEEEEEEeccCCCcc--CCcceEEEeccCCceecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEeccc
Confidence 345666 6888888887644 555666666555433333344443 44466667765 58888878999999998754
Q ss_pred CCCcceEEEEEe---cCCCCcccceeeccCCCceEe
Q 008189 139 HKERQVQNYAVP---ANPSDPYLRKWIKPDNNPVVF 171 (574)
Q Consensus 139 ~~~~~~q~lA~s---~D~~d~~l~~w~k~~~~Pvi~ 171 (574)
.+-.-..++-+. .|.-|+ .+|+|. ..||+.
T Consensus 215 td~nycmgllwanen~dlldp--aswtks-ptpvf~ 247 (324)
T COG3940 215 TDVNYCMGLLWANENSDLLDP--ASWTKS-PTPVFK 247 (324)
T ss_pred cccceeeeeeeecccCCcCCc--hhcccC-CCccee
Confidence 321112233222 233344 589997 478884
No 82
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=83.45 E-value=33 Score=37.38 Aligned_cols=128 Identities=11% Similarity=0.094 Sum_probs=81.3
Q ss_pred CCEEEEEEeeCCCCC-CC-----CccEEEEeecCC----cCCceecccccCCCCCccC-------CCeEeeeEEEc-CCC
Q 008189 67 KGIYHLFYQYNPKGA-VW-----GNIVWAHSVSKD----LINWEALEPALYPSKPFDI-------NGCWSGSATVL-PGN 128 (574)
Q Consensus 67 ~G~yHlfyq~~P~~~-~~-----g~~~Wgha~S~D----lv~W~~~~~al~P~~~~D~-------~gv~SGsav~~-~dg 128 (574)
+|+..|||-....+. .. -...-|++.+.| +-.|+.+-+.+.||+.+-+ ...-.+.++++ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 699999999743211 11 123456777777 5578877788888875322 24557888887 589
Q ss_pred eeEEEEeeecCC--------------------------------CcceEEEEEecCCCCcccceeeccCCCceEecCCCC
Q 008189 129 KPIILYTGVDHK--------------------------------ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDV 176 (574)
Q Consensus 129 ~~~l~YTg~~~~--------------------------------~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~ 176 (574)
+-||+|.|+... ....++||...+.. +..|+-+ .|+|....
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~--~PL~~a~~-- 295 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELL--PPLLSANG-- 295 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEE--EEEEEETT--
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEe--Ccceeccc--
Confidence 999999987531 02246788887642 3578876 59996532
Q ss_pred CCcCccCCeeEEecCCCeEEEEEeeec
Q 008189 177 NASAFRDPTTAWWSNDGHWRMLVGSRR 203 (574)
Q Consensus 177 ~~~~fRDP~Vvw~~~~g~~~M~~g~~~ 203 (574)
-.....=|.||.. +|+||++..++.
T Consensus 296 v~de~ERP~iv~~--~gkyYLFt~s~~ 320 (428)
T PF02435_consen 296 VNDELERPHIVFM--NGKYYLFTISHL 320 (428)
T ss_dssp TBS-EEEEEEEEE--TTEEEEEEEEEG
T ss_pred ccccccCCcEEEE--CCEEEEEEEecc
Confidence 1234456887654 899999998875
No 83
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=82.15 E-value=14 Score=40.83 Aligned_cols=113 Identities=15% Similarity=0.149 Sum_probs=65.8
Q ss_pred cCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCC---CcceEEEEEecCCCCcccceeeccCCCceEec
Q 008189 96 LINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHK---ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFP 172 (574)
Q Consensus 96 lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~ 172 (574)
.-++.+....+.|...|=. |- +. .+|.|+|||.-+... +...=+.|+|+| |++|+.++ |-|.|
T Consensus 45 ~n~~~Rp~~HFqP~k~wMN-----~P-~~-ykG~yHLFyQyNP~gavwg~ivWGHavSkD-----LinW~~lp--~Ai~P 110 (571)
T KOG0228|consen 45 VNQPDRPGFHFQPPKGWMN-----DP-MY-YKGKYHLFYQYNPKGAVWGNIVWGHAVSKD-----LINWEALP--PAIAP 110 (571)
T ss_pred ccccCCceeecCCCccccc-----Cc-cc-cCcEEEEEEecCCCCceeeeeEeeeecchh-----hccccccC--cccCC
Confidence 3455555555666543321 22 33 589999999866442 334456899988 59999863 56644
Q ss_pred CCCCC-CcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEe-CC-----CCCCEEcc
Q 008189 173 GPDVN-ASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRS-RD-----FMKWTKAK 224 (574)
Q Consensus 173 ~~~~~-~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S-~D-----l~~W~~~~ 224 (574)
....+ ...|---.++ . .+|.=.|+..+......+|..|.- .| |+.|...+
T Consensus 111 s~~~ding~wSGSati-~-~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~ 167 (571)
T KOG0228|consen 111 SEWFDINGCWSGSATI-D-PNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDG 167 (571)
T ss_pred CCccccCccccceEEE-c-cCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCC
Confidence 33111 2344444433 3 577777777665544457777762 22 56787654
No 84
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=81.40 E-value=19 Score=40.03 Aligned_cols=96 Identities=17% Similarity=0.168 Sum_probs=58.1
Q ss_pred CCCeeEEEEeeecC---CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCC-cCccCCeeEEecCCCeEEEEEee
Q 008189 126 PGNKPIILYTGVDH---KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNA-SAFRDPTTAWWSNDGHWRMLVGS 201 (574)
Q Consensus 126 ~dg~~~l~YTg~~~---~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~-~~fRDP~Vvw~~~~g~~~M~~g~ 201 (574)
-+|+|++||-=+.. .+...=+.|+|+| |++|+.. .+++.|...++. ..|---.|+ + .++.+.|+-|.
T Consensus 50 ~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~--piaL~Pd~~~d~~g~ySGSAV~-~-~~~l~lfytg~ 120 (486)
T COG1621 50 FDGKYHLFYQYNPFGAAHGPKHWGHAVSKD-----LVHWEHL--PIALAPDDDYDSHGCYSGSAVV-D-DGNLSLFYTGN 120 (486)
T ss_pred ECCEEEEEEecCCCCCCCCCceeeeeccCC-----cccceEC--CceecCCCccccCCceeeeEEE-e-CCcEEEEEccc
Confidence 48899999975542 1333446799987 5999974 245554443332 333444444 3 46778887776
Q ss_pred ecC---Cee-EEEEEEeCCCCCCEE-cccccccC
Q 008189 202 RRK---HRG-MAYLYRSRDFMKWTK-AKHPIHSL 230 (574)
Q Consensus 202 ~~~---~~G-~i~ly~S~Dl~~W~~-~~~~l~~~ 230 (574)
..+ .+. .=.++.|+|..++++ .+.++...
T Consensus 121 v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~~ 154 (486)
T COG1621 121 VRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIIDQ 154 (486)
T ss_pred eeccCCcceeEEEEEEEcCCCceEeccCCceecC
Confidence 542 222 335788888888887 36565543
No 85
>PTZ00334 trans-sialidase; Provisional
Probab=77.81 E-value=17 Score=42.46 Aligned_cols=87 Identities=20% Similarity=0.328 Sum_probs=55.5
Q ss_pred eeEEEcCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEE
Q 008189 120 GSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLV 199 (574)
Q Consensus 120 Gsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~ 199 (574)
||.|..+||++++=-.+.+..+.....|.+|+|.+ +|+-..+ ......+||.|+-. ++|+..|+.
T Consensus 263 GSGI~medGTLVFPv~a~~~~g~~vslIiYS~d~g-----~W~ls~g---------~s~~gC~~P~I~EW-e~gkLlM~t 327 (780)
T PTZ00334 263 GSGVQMKDGTLVFPVEGTKKDGKAVSLIIYSSATE-----SGNLSKG---------MSADGCSDPSVVEW-KEGKLMMMT 327 (780)
T ss_pred cCeEEecCCeEEEEEEEEcCCCCEEEEEEEecCCC-----CeEEcCC---------CCCCCCCCCEEEEE-cCCeEEEEE
Confidence 34445578987765555544455566788998863 4853211 12246799997744 468888877
Q ss_pred eeecCCeeEEEEEEeCCC-CCCEEcc
Q 008189 200 GSRRKHRGMAYLYRSRDF-MKWTKAK 224 (574)
Q Consensus 200 g~~~~~~G~i~ly~S~Dl-~~W~~~~ 224 (574)
.... |+-.+|+|.|. ..|+..-
T Consensus 328 ~C~d---G~RrVYES~DmG~tWtEAl 350 (780)
T PTZ00334 328 ACDD---GRRRVYESGDKGDSWTEAL 350 (780)
T ss_pred EeCC---CCEEEEEECCCCCChhhCC
Confidence 6542 44468999885 7898653
No 86
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=73.46 E-value=87 Score=32.87 Aligned_cols=150 Identities=17% Similarity=0.177 Sum_probs=83.3
Q ss_pred eeEEECCEEEEEEeeCCC-CC---CCCccEEEEeecCC-cCCceecccccCCCCCccCCCe------EeeeEEEcCCCee
Q 008189 62 GPMYYKGIYHLFYQYNPK-GA---VWGNIVWAHSVSKD-LINWEALEPALYPSKPFDINGC------WSGSATVLPGNKP 130 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~-~~---~~g~~~Wgha~S~D-lv~W~~~~~al~P~~~~D~~gv------~SGsav~~~dg~~ 130 (574)
+.|-.+|+-+|.|+..-. ++ .|..-.=+.+.|+| ..+|+..+..+.+....- .|+ |.-.+....||-.
T Consensus 99 ~~I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~-~g~~~~~~~fq~~a~~~~dgyV 177 (316)
T PF13810_consen 99 DGISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIRPNSPFH-PGFNQGNWNFQMAAFVKDDGYV 177 (316)
T ss_pred ceEEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCccccccccc-CCccccccccccccccCCCCEE
Confidence 777889999999986522 11 23333446889999 689999986665543111 111 2222333356767
Q ss_pred EEEEeeecCCCcceEEEEEecC--CCCcc------cce--eeccCC--CceEecCCCCCCcCccCCeeEEecCCCeEEEE
Q 008189 131 IILYTGVDHKERQVQNYAVPAN--PSDPY------LRK--WIKPDN--NPVVFPGPDVNASAFRDPTTAWWSNDGHWRML 198 (574)
Q Consensus 131 ~l~YTg~~~~~~~~q~lA~s~D--~~d~~------l~~--w~k~~~--~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~ 198 (574)
|+|=|...+ .....||...- -.|+. ... |.+... .||+..+ +.-..|.|.+..|+|+|+
T Consensus 178 Yv~gt~~~R--~g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~-------vgElSv~~~~~~gk~Vl~ 248 (316)
T PF13810_consen 178 YVYGTPFGR--NGGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGP-------VGELSVRYNEYLGKWVLS 248 (316)
T ss_pred EEEeCCCCC--CCcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCC-------ccceEEEEeCCCCEEEEE
Confidence 777665443 22334443321 11100 012 544211 3555322 223346677678999999
Q ss_pred EeeecCCeeEEEEEEeCCCC-CCEEc
Q 008189 199 VGSRRKHRGMAYLYRSRDFM-KWTKA 223 (574)
Q Consensus 199 ~g~~~~~~G~i~ly~S~Dl~-~W~~~ 223 (574)
.... ..+.|.+.++++.. .|...
T Consensus 249 ~~~~--~~~~I~~RtA~~P~GpWs~~ 272 (316)
T PF13810_consen 249 YFDA--GTGGIVLRTAPSPTGPWSEP 272 (316)
T ss_pred Eecc--cCCcEEEEecCCCCCCCCCC
Confidence 7643 23568889988876 58643
No 87
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=63.69 E-value=32 Score=36.04 Aligned_cols=91 Identities=15% Similarity=0.186 Sum_probs=51.8
Q ss_pred CCCeeEEEEeeecCCCc-------ceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCcc---CCeeE--EecCCC
Q 008189 126 PGNKPIILYTGVDHKER-------QVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFR---DPTTA--WWSNDG 193 (574)
Q Consensus 126 ~dg~~~l~YTg~~~~~~-------~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fR---DP~Vv--w~~~~g 193 (574)
.+|+.||.|..+..-+. ....||+|.|.+ .+|++.+ ..+-.+.+.. ..+. .++.. +. .++
T Consensus 103 v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G----~tW~~~~-~~~~~~~~~~--~g~~~~~~~fq~~a~~-~~d 174 (316)
T PF13810_consen 103 VGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNG----ETWTVVP-GTIRPNSPFH--PGFNQGNWNFQMAAFV-KDD 174 (316)
T ss_pred ECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCC----CCceeCC-Cccccccccc--CCcccccccccccccc-CCC
Confidence 48899999998754221 256799999976 8999863 2232222100 1111 12211 22 245
Q ss_pred eEEEEEeeecCCeeEEEEEEe-----CCCCCCEEcc
Q 008189 194 HWRMLVGSRRKHRGMAYLYRS-----RDFMKWTKAK 224 (574)
Q Consensus 194 ~~~M~~g~~~~~~G~i~ly~S-----~Dl~~W~~~~ 224 (574)
.|+-++|......|.+.|+|- .|+..|++-.
T Consensus 175 gyVYv~gt~~~R~g~~~LaRV~~~~i~d~~ayeyw~ 210 (316)
T PF13810_consen 175 GYVYVYGTPFGRNGGVYLARVPPDDILDRSAYEYWD 210 (316)
T ss_pred CEEEEEeCCCCCCCcEEEEEeCHHHCCChhhccccC
Confidence 566666765444566788884 4555676654
No 88
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=55.68 E-value=2.4e+02 Score=28.60 Aligned_cols=137 Identities=17% Similarity=0.266 Sum_probs=67.9
Q ss_pred eEEE--CCEEEEEEeeCCCCCCCCccEEEEeecCCcC---CceecccccCCCCCcc-CCCeEeeeEEEcCCCeeEEEEee
Q 008189 63 PMYY--KGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI---NWEALEPALYPSKPFD-INGCWSGSATVLPGNKPIILYTG 136 (574)
Q Consensus 63 ~~~~--~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv---~W~~~~~al~P~~~~D-~~gv~SGsav~~~dg~~~l~YTg 136 (574)
++|+ +..|+|.||+.|. .....||+|.- -|... ..|..+..-. ..|...--++ -++-..|||+++
T Consensus 81 vFYFaPk~~W~L~yQwg~~-------~fsY~Ts~DptnpngWSap-q~lf~g~i~~~~~g~iD~~vI-~D~~n~yLFfa~ 151 (271)
T PF03664_consen 81 VFYFAPKNIWYLAYQWGPA-------AFSYSTSSDPTNPNGWSAP-QPLFSGSISGSGTGPIDQWVI-CDDTNMYLFFAG 151 (271)
T ss_pred EEEecCCcEEEEEEecCCC-------cceeecCCCCCCCccCCCC-cccccccccCCCCCceeeEEE-ecCCceEEEEcC
Confidence 5666 7899999997653 24567888864 47753 3343332111 1233344333 235568999988
Q ss_pred ecCCCcceEEEEEecCCCCcccceeeccCC-CceE--ecCCCCCCcCccCCeeEEec-CCCeEEEEEeeecCCeeE-EEE
Q 008189 137 VDHKERQVQNYAVPANPSDPYLRKWIKPDN-NPVV--FPGPDVNASAFRDPTTAWWS-NDGHWRMLVGSRRKHRGM-AYL 211 (574)
Q Consensus 137 ~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~-~Pvi--~~~~~~~~~~fRDP~Vvw~~-~~g~~~M~~g~~~~~~G~-i~l 211 (574)
-+. . +..+.. . +..|-..-+ .+++ .... ..-|.-+. |++- -.++|+|++-+... .|+ -.-
T Consensus 152 DnG-k---iYRs~~--~----i~nFP~~fgs~~~vvmsd~~---~nLFEA~~-VYkv~G~~~YLmiVEaiGs-~gRyFRS 216 (271)
T PF03664_consen 152 DNG-K---IYRSSM--P----IGNFPGGFGSSYTVVMSDTR---NNLFEAVQ-VYKVKGQNQYLMIVEAIGS-DGRYFRS 216 (271)
T ss_pred CCC-c---EEEecc--c----hhhCCCCCCCceEEEEecCc---cceeeeeE-EEEEcCCceEEEEEEEecC-CCcEEEe
Confidence 542 1 111110 0 011211111 2322 2211 13455666 3442 34799999877642 232 233
Q ss_pred EEeCCCC-CCEEc
Q 008189 212 YRSRDFM-KWTKA 223 (574)
Q Consensus 212 y~S~Dl~-~W~~~ 223 (574)
++|..|. .|+..
T Consensus 217 fTa~sL~G~Wtp~ 229 (271)
T PF03664_consen 217 FTATSLDGPWTPQ 229 (271)
T ss_pred eecCCCCCcceec
Confidence 4456653 67654
No 89
>PF06905 FAIM1: Fas apoptotic inhibitory molecule (FAIM1); InterPro: IPR010695 This family consists of several fas apoptotic inhibitory molecule (FAIM) proteins. FAIM expression is upregulated in B cells by anti-Ig treatment that induces Fas-resistance, and overexpression of FAIM diminishes sensitivity to Fas-mediated apoptosis of B and non-B cell lines. FAIM is highly evolutionarily conserved and is widely expressed in murine tissues, suggesting that FAIM plays an important role in cellular physiology [].; GO: 0043066 negative regulation of apoptosis; PDB: 3MX7_A 2KW1_A 2KD2_A.
Probab=55.27 E-value=37 Score=32.53 Aligned_cols=32 Identities=13% Similarity=0.187 Sum_probs=26.7
Q ss_pred eEEEEEEEeCCeEEEEcCCCceEEEEeeecCCC
Q 008189 507 KLSLRSLIDHSVVESFGAGGKTCITSRVYPTLA 539 (574)
Q Consensus 507 ~~~LrIfvD~S~vEvFvNdG~~~lT~Riyp~~~ 539 (574)
-.+.||++|+..++||+| |+..=|.+-|.+.+
T Consensus 107 G~~~RIvLdk~t~~vwvn-G~~iet~~eFvd~G 138 (177)
T PF06905_consen 107 GQEYRIVLDKDTMDVWVN-GEKIETEGEFVDDG 138 (177)
T ss_dssp TEEEEEEEETTTTEEEET-TCEE--EEEEETTC
T ss_pred CCEEEEEEEcceEEEEEC-CEEccccceecCCC
Confidence 368999999999999996 88889999998876
No 90
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function.; PDB: 3IMM_B 3NMB_A 3S5Q_A 3OSD_A 3HBK_A 3H3L_A 3U1X_A.
Probab=31.40 E-value=1.5e+02 Score=27.57 Aligned_cols=55 Identities=11% Similarity=0.074 Sum_probs=37.1
Q ss_pred CCeEEEEEEEeCCeEEEEcCCCceEEEEeeecCCC---cCCCceEEEEeCCceeEEEeEEee
Q 008189 505 DKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLA---VFDDAHLYAFNNGTETVTVEKLNA 563 (574)
Q Consensus 505 ~~~~~LrIfvD~S~vEvFvNdG~~~lT~Riyp~~~---~~~~~~l~~~~~g~~~~~i~~l~~ 563 (574)
++-.+++|.+..+.|.++|| |+.+++..--.... ....+.|.. .+ +.+.+.+++|
T Consensus 127 ~~W~~~~I~~~g~~i~v~vn-G~~v~~~~d~~~~~~~~~~G~Igl~~--~~-~~~~frNi~I 184 (185)
T PF06439_consen 127 GEWNTVRIVVKGNRITVWVN-GKPVADFTDPSFPYSNPTKGPIGLQT--HG-SEVQFRNIKI 184 (185)
T ss_dssp TSEEEEEEEEETTEEEEEET-TEEEEEEETTSHHHHHHSSBEEEEEC--SS-STEEEEEEEE
T ss_pred CceEEEEEEEECCEEEEEEC-CEEEEEEEcCCCCCCCCCceEEEEEe--CC-CeEEEEEEEE
Confidence 57779999999999999996 77777765322110 112456553 33 4678888875
No 91
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=22.45 E-value=4e+02 Score=23.56 Aligned_cols=26 Identities=15% Similarity=0.239 Sum_probs=21.6
Q ss_pred CCeEEEEEEEeCCeEEEEcCCCceEEE
Q 008189 505 DKKLSLRSLIDHSVVESFGAGGKTCIT 531 (574)
Q Consensus 505 ~~~~~LrIfvD~S~vEvFvNdG~~~lT 531 (574)
+....|.|.+.....+|+|| |....+
T Consensus 76 g~~F~l~i~~~~~~f~i~vn-g~~~~~ 101 (128)
T smart00276 76 GQPFDLTIIVQPDHFQIFVN-GVHITT 101 (128)
T ss_pred CCEEEEEEEEcCCEEEEEEC-CEeEEE
Confidence 67889999999999999997 555443
No 92
>PF02012 BNR: BNR/Asp-box repeat; InterPro: IPR002860 Members of this entry contain multiple BNR (bacterial neuraminidase repeat) repeats or Asp-boxes. The repeats are short, however the repeats are never found closer than 40 residues together suggesting that the repeat is structurally longer. These repeats are found in a variety of non-homologous proteins, including bacterial ribonucleases, sulphite oxidases, reelin, netrins, sialidases, neuraminidases, some lipoprotein receptors, and a variety of glycosyl hydrolases [].; PDB: 2JKB_A 2VW0_A 2VW2_A 2VW1_A 2CN2_D 2CN3_B 2VK7_B 2VK5_A 2VK6_A 2BF6_A ....
Probab=21.17 E-value=59 Score=17.15 Aligned_cols=11 Identities=18% Similarity=0.576 Sum_probs=6.8
Q ss_pred EecCCCCcccceeec
Q 008189 149 VPANPSDPYLRKWIK 163 (574)
Q Consensus 149 ~s~D~~d~~l~~w~k 163 (574)
+|+|+| .+|++
T Consensus 2 ~S~D~G----~TW~~ 12 (12)
T PF02012_consen 2 YSTDGG----KTWKK 12 (12)
T ss_dssp EESSTT----SS-EE
T ss_pred EeCCCc----ccCcC
Confidence 577775 78864
No 93
>PF12113 SVM_signal: SVM protein signal sequence; InterPro: IPR021970 This domain is presumed to be a signal peptide sequence found in Sequence-variable mosaic (SVM) proteins []. It is found in phytoplasmas. This presumed signal sequence is about 30 amino acids in length.
Probab=20.45 E-value=78 Score=21.65 Aligned_cols=22 Identities=45% Similarity=0.751 Sum_probs=15.5
Q ss_pred hHHHHHHHHh-hheeecCCcccc
Q 008189 6 FLSIFMLIAY-LWVISNNNGVEA 27 (574)
Q Consensus 6 ~~~~~~~~~~-~~~~~~~~~~~~ 27 (574)
+++|++.+.. ++.|.||+-|-|
T Consensus 10 ii~i~Lf~~LGL~fI~NN~qvmA 32 (33)
T PF12113_consen 10 IINIFLFIFLGLFFITNNNQVMA 32 (33)
T ss_pred hhhhHHHHHHHHHheecCceeec
Confidence 5677777766 888888876543
No 94
>PF00337 Gal-bind_lectin: Galactoside-binding lectin; InterPro: IPR001079 Galectins (also known as galaptins or S-lectin) are a family of proteins defined by having at least one characteristic carbohydrate recognition domain (CRD) with an affinity for beta-galactosides and sharing certain sequence elements. Members of the galectins family are found in mammals, birds, amphibians, fish, nematodes, sponges, and some fungi. Galectins are known to carry out intra- and extracellular functions through glycoconjugate-mediated recogntion. From the cytosol they may be secreted by non-classical pathways, but they may also be targeted to the nucleus or specific sub-cytosolic sites. Within the same peptide chain some galectins have a CRD with only a few additional amino acids, whereas others have two CRDs joined by a link peptide, and one (galectin-3) has one CRD joined to a different type of domain [, ]. The galectin carbohydrate recognition domain (CRD) is a beta-sandwich of about 135 amino acid. The two sheets are slightly bent with 6 strands forming the concave side and 5 strands forming the convex side. The concave side forms a groove in which carbohydrate is bound, and which is long enough to hold about a linear tetrasaccharide [, ].; GO: 0005529 sugar binding; PDB: 2WSU_B 2WT0_A 2WT1_A 2WT2_B 2WSV_A 1HLC_A 2ZGQ_A 3M3Q_B 1WW5_C 3M3E_A ....
Probab=20.32 E-value=6e+02 Score=22.36 Aligned_cols=51 Identities=10% Similarity=0.027 Sum_probs=31.1
Q ss_pred CCeEEEEEEEeCCeEEEEcCCCceEEEEeeecCCCcCCCceEEEEeCCceeEEEeEEe
Q 008189 505 DKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLN 562 (574)
Q Consensus 505 ~~~~~LrIfvD~S~vEvFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~~~~i~~l~ 562 (574)
++..+|+|.+..+..+|++| |....+- -|-... ++-..|.+. +++.|.+++
T Consensus 82 g~~F~i~I~~~~~~f~I~vn-g~~~~~F-~~R~~~-~~i~~l~i~----Gdv~i~~v~ 132 (133)
T PF00337_consen 82 GQPFEIRIRVEEDGFKIYVN-GKHFCSF-PHRLPL-SSIDYLQIQ----GDVQIYSVE 132 (133)
T ss_dssp TSEEEEEEEEESSEEEEEET-TEEEEEE-E-SSCG-GGEEEEEEE----ESEEEEEEE
T ss_pred CceEEEEEEEecCeeEEEEC-CeEEEEe-eCcCCH-HHcCEEEEE----CCEEEEEEE
Confidence 67889999999999999997 6544332 232211 122344432 356776665
Done!