BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008191
(574 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359476173|ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
Length = 571
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/581 (77%), Positives = 502/581 (86%), Gaps = 18/581 (3%)
Query: 1 MGSLILTLKCYKPLASIKFSPFINSFHTLQLRPPKPNNRRVF--------RCFSTLNSSP 52
MG+L LKCYKPL ++F P NS T L P ++ +F RCFS++ S
Sbjct: 1 MGTL---LKCYKPLFPLRFIPIPNSVRTSGL--PTHHSHAIFSNSKVCGGRCFSSVKQSQ 55
Query: 53 NVIDDKSNGKTDGDDKPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHI 112
+ID+K++G +++ A +LWLYNTMSR++E+ KPKV+G+VGMYVCGVT YDLSHI
Sbjct: 56 PLIDEKNSGGEGVENRRA----ELWLYNTMSRQKEVFKPKVDGRVGMYVCGVTAYDLSHI 111
Query: 113 GHARVYVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQ 172
GHARVYV+FDVLYRYLRHL YEV YVRNFTDVDDKIIARANE+GEDPI+LSRRYC+EFH
Sbjct: 112 GHARVYVSFDVLYRYLRHLEYEVNYVRNFTDVDDKIIARANEMGEDPINLSRRYCQEFHV 171
Query: 173 DMVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRK 232
DM LHCLPPSVEP VSDHMP IIDMI QI+DN AYRV+GDVYFSVDKFPEYG+LSGRK
Sbjct: 172 DMTYLHCLPPSVEPCVSDHMPQIIDMIKQIIDNDCAYRVEGDVYFSVDKFPEYGRLSGRK 231
Query: 233 LEDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGH 292
+EDNRAGERVAVDSRKKNPADFALWK+AK+GEPFW+SPWGPGRPGWHIECSAMSAAYLG+
Sbjct: 232 VEDNRAGERVAVDSRKKNPADFALWKAAKKGEPFWDSPWGPGRPGWHIECSAMSAAYLGY 291
Query: 293 SFDIHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQ 352
SFDIHGGGMDLVFPHHENEIAQSCAAC S+ISYWIHNGFVTIDSEKMSKSLGNFFTIRQ
Sbjct: 292 SFDIHGGGMDLVFPHHENEIAQSCAACKQSNISYWIHNGFVTIDSEKMSKSLGNFFTIRQ 351
Query: 353 VMELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALK 412
V+++YHPLALRLFLIGTHYRSPINYS VQLESAS+R+FYIYQTLHDC+ A+ D K
Sbjct: 352 VIDIYHPLALRLFLIGTHYRSPINYSDVQLESASDRVFYIYQTLHDCQNAMD-QDDMTKK 410
Query: 413 DSIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLES 472
DS+PP + INKF+NDFL SMSDDLHT VVLAALSDPLKTINDLLHTRKGKKQ +RLES
Sbjct: 411 DSVPPHILDCINKFYNDFLTSMSDDLHTPVVLAALSDPLKTINDLLHTRKGKKQELRLES 470
Query: 473 LAALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEY 532
LAALEK IR+VLT+LGLM YSE LLQLREKALKR+ LTED +LQ+IE+RT+ARKNKEY
Sbjct: 471 LAALEKVIRDVLTILGLMPASYSEALLQLREKALKRSKLTEDHILQKIEERTMARKNKEY 530
Query: 533 EKSDAIRKDLAAVGIALMDSPVGTTWRPALPLALQEQAVAT 573
EKSDAIRKDLAAVGIALMDSP GTTWRPA+PLALQEQ AT
Sbjct: 531 EKSDAIRKDLAAVGIALMDSPDGTTWRPAIPLALQEQVAAT 571
>gi|255548846|ref|XP_002515479.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223545423|gb|EEF46928.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 563
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/573 (76%), Positives = 492/573 (85%), Gaps = 12/573 (2%)
Query: 4 LILTLKCYKPLASIKFSPFINSF--HTLQLRPPKPNNRRVFRCFSTLNSSPNVIDDKSNG 61
++ +K YKPL S++ SP ++S R P FR F++L+SS +IDDK NG
Sbjct: 1 MVSVVKWYKPLTSVRLSPPLHSLLRSIPTHRVPTRKRATFFRLFNSLSSSRPLIDDKLNG 60
Query: 62 KTDGDDKPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTF 121
DG P ST+L+LYNTMSR ++L KPKVEGKVGMYVCGVT YDLSHIGHARVYVTF
Sbjct: 61 -VDGTLTP---STELYLYNTMSRNKDLFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTF 116
Query: 122 DVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLP 181
DVLYRYL+HLGY+VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFH DMV LHCLP
Sbjct: 117 DVLYRYLKHLGYDVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHNDMVYLHCLP 176
Query: 182 PSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGER 241
PS+EP VSDHMP II+MI QILDNG AYR+DGDVYFS+D +PEYG+LSGRKLEDNRAGER
Sbjct: 177 PSIEPCVSDHMPQIINMIKQILDNGCAYRIDGDVYFSIDGYPEYGKLSGRKLEDNRAGER 236
Query: 242 VAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGM 301
VAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGM
Sbjct: 237 VAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGM 296
Query: 302 DLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLA 361
DLVFPHHENEIAQSCAAC S+ISYW+HNGFVTI+SEKMSKSLGNFFTIRQV++LYHPLA
Sbjct: 297 DLVFPHHENEIAQSCAACRGSNISYWVHNGFVTINSEKMSKSLGNFFTIRQVIDLYHPLA 356
Query: 362 LRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVT 421
LR FL+GTHYRSP+NYS VQLESASERIFYIYQTLHDCE +S + A KDS+P DT+
Sbjct: 357 LRFFLLGTHYRSPVNYSDVQLESASERIFYIYQTLHDCETVISQHETAFEKDSVPSDTLD 416
Query: 422 SINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIR 481
INKF + F+ SMSDDLHT V+LAALSDPLK IND+LHTRK R++SLAALEK +R
Sbjct: 417 GINKFSDVFVTSMSDDLHTPVLLAALSDPLKIINDMLHTRK------RIQSLAALEKIVR 470
Query: 482 NVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKD 541
+ L+VLGLM T YSEVL QLREKAL+RA LTE+QVLQRIE+RTVARKN++YE+SDAIRKD
Sbjct: 471 DALSVLGLMPTTYSEVLQQLREKALRRAKLTEEQVLQRIEERTVARKNRDYERSDAIRKD 530
Query: 542 LAAVGIALMDSPVGTTWRPALPLALQEQAVATS 574
LA GIALMDSP GT+WRPA+PLA+QEQ A +
Sbjct: 531 LATHGIALMDSPDGTSWRPAIPLAMQEQQAAAT 563
>gi|297826557|ref|XP_002881161.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327000|gb|EFH57420.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 562
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/571 (75%), Positives = 484/571 (84%), Gaps = 17/571 (2%)
Query: 1 MGSLILTL-KCYKPLASIKFSPFINSFHTLQ--LRPPKPNNRRVFRCFSTLNSSPNVIDD 57
M S +L L K +P I+FS S +Q LRP K R RCF+TL+S
Sbjct: 1 MASSVLNLFKSCRPFTPIRFSSLPKSQFRIQFPLRPGKETQSR--RCFTTLSS------- 51
Query: 58 KSNGKTDGDDKPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARV 117
TDG P S +LWL+NTMSRK+EL KPK+EGKVGMYVCGVT YDLSHIGHARV
Sbjct: 52 ----LTDGG-APISGGKELWLHNTMSRKKELFKPKIEGKVGMYVCGVTAYDLSHIGHARV 106
Query: 118 YVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDL 177
YVTFDVL RYL+HLGYEV YVRNFTDVDDKIIARANELGEDPISLSRR+CEEF +DM L
Sbjct: 107 YVTFDVLLRYLKHLGYEVSYVRNFTDVDDKIIARANELGEDPISLSRRFCEEFKRDMEQL 166
Query: 178 HCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNR 237
CL PSV+P VSDH+P I+D+I QILDNG+AY+VDGD+YFSVDKFP YG+LSGRKLEDNR
Sbjct: 167 QCLDPSVQPLVSDHIPQIVDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNR 226
Query: 238 AGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIH 297
AGERVAVD+RKK+PADFALWK+AKEGEPFWESPWG GRPGWHIECSAMSAAYLG+SFDIH
Sbjct: 227 AGERVAVDTRKKHPADFALWKTAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIH 286
Query: 298 GGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELY 357
GGGMDLVFPHHENEIAQSCAAC++S+ISYWIHNGFVT+DSEKMSKSLGNFFTIRQV++LY
Sbjct: 287 GGGMDLVFPHHENEIAQSCAACDSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDLY 346
Query: 358 HPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPP 417
HPLALRLFL+GTHYRSPINYS LESASERIFYIYQTLHDCE L D+ DS+P
Sbjct: 347 HPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESLLGEKDSTFGNDSVPS 406
Query: 418 DTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALE 477
DT+T+IN FH++F+ASMSDDL T V LAA+S+PLKTIND++HTRKGKKQA R ESL ALE
Sbjct: 407 DTLTTINTFHSEFVASMSDDLLTPVTLAAMSEPLKTINDIIHTRKGKKQARREESLKALE 466
Query: 478 KTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDA 537
TIR+VLT+LGLM T YSEVL QL+EKALKRA L E+ VLQR+++RT ARKNKEYE+SDA
Sbjct: 467 TTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLEEEDVLQRVQERTDARKNKEYERSDA 526
Query: 538 IRKDLAAVGIALMDSPVGTTWRPALPLALQE 568
IRKDLA+VGIALMDSP GTTWRPA+PLALQE
Sbjct: 527 IRKDLASVGIALMDSPEGTTWRPAIPLALQE 557
>gi|42569504|ref|NP_565717.2| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|330253408|gb|AEC08502.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 563
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/576 (75%), Positives = 482/576 (83%), Gaps = 17/576 (2%)
Query: 1 MGSLILTL-KCYKPLASIKFSPFINSFHTLQ--LRPPKPNNRRVFRCFSTLNSSPNVIDD 57
M S +L L K +P I+FS S +Q LRP K R RCF+TL+S
Sbjct: 1 MASSVLNLFKSCRPFTPIRFSSLPKSQFRIQFPLRPGKETQLR--RCFTTLSSL------ 52
Query: 58 KSNGKTDGDDKPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARV 117
TDG P S +LWL+NTMSRK+EL KPKVEGKVGMYVCGVT YDLSHIGHARV
Sbjct: 53 -----TDGG-APISGGKELWLHNTMSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARV 106
Query: 118 YVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDL 177
YVTFDVL RYL+HLGYEV YVRNFTDVDDKIIARA EL EDPISLSRR+CEEF++DM L
Sbjct: 107 YVTFDVLLRYLKHLGYEVSYVRNFTDVDDKIIARAKELEEDPISLSRRFCEEFNRDMEQL 166
Query: 178 HCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNR 237
CL PSV+PRVSDH+P IID+I QILDNG+AY+VDGD+YFSVDKFP YG+LSGRKLEDNR
Sbjct: 167 QCLDPSVQPRVSDHIPQIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNR 226
Query: 238 AGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIH 297
AGERVAVD+RKK+PADFALWK+AKEGEPFWESPWG GRPGWHIECSAMSAAYLG+SFDIH
Sbjct: 227 AGERVAVDTRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIH 286
Query: 298 GGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELY 357
GGGMDLVFPHHENEIAQSCAAC++S+ISYWIHNGFVT+DSEKMSKSLGNFFTIRQV++LY
Sbjct: 287 GGGMDLVFPHHENEIAQSCAACDSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDLY 346
Query: 358 HPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPP 417
HPLALRLFL+GTHYRSPINYS LESASERIFYIYQTLHDCE AL D+ S+P
Sbjct: 347 HPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENGSVPS 406
Query: 418 DTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALE 477
DT+TSIN F +F+ASMSDDL T V LAA+S+PLKTINDL+HTRKGKKQA R ESL ALE
Sbjct: 407 DTLTSINTFRTEFVASMSDDLLTPVTLAAMSEPLKTINDLIHTRKGKKQARREESLKALE 466
Query: 478 KTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDA 537
TIR+VLT+LGLM T YSEVL QL+EKALKRA L E+ VLQR+++RT ARKNKEYE+SDA
Sbjct: 467 TTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKNKEYERSDA 526
Query: 538 IRKDLAAVGIALMDSPVGTTWRPALPLALQEQAVAT 573
IRKDLA VGIALMDSP GTTWRPA+PLALQE T
Sbjct: 527 IRKDLAKVGIALMDSPEGTTWRPAIPLALQEPVTTT 562
>gi|449437168|ref|XP_004136364.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 576
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/579 (74%), Positives = 478/579 (82%), Gaps = 8/579 (1%)
Query: 1 MGSLILTLKCYKPLASIKFSP--FINSFHTLQLRPPKP---NNRRVFRCFSTLNSSPNVI 55
M SL LK Y PL +F+P +F LR N+ F F++ +S +
Sbjct: 1 MASL---LKFYNPLTLTRFTPVSLSQAFLRRTLRNSHFSFFNSATTFARFTSSPTSSQLP 57
Query: 56 DDKSNGKTDGDDKPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHA 115
N K + S S++LWL+NTMSRK+E+ KPKVEGKVGMYVCGVT YDLSHIGHA
Sbjct: 58 VSAPNLKEINALRHDSTSSELWLHNTMSRKKEVFKPKVEGKVGMYVCGVTAYDLSHIGHA 117
Query: 116 RVYVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMV 175
RVYVTFDVLYRYLRHLGYEV YVRNFTDVDDKIIARANELGEDP++LSRRYCEEF +DM+
Sbjct: 118 RVYVTFDVLYRYLRHLGYEVLYVRNFTDVDDKIIARANELGEDPLNLSRRYCEEFRRDMM 177
Query: 176 DLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLED 235
LHCLPPSVEP+VSDHMP IIDMI QILDNG+AY VDGDVYF+VDKFPEYGQLSGRKLED
Sbjct: 178 YLHCLPPSVEPQVSDHMPQIIDMIKQILDNGYAYSVDGDVYFNVDKFPEYGQLSGRKLED 237
Query: 236 NRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFD 295
NRAGERV+VDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSA+YLG+SFD
Sbjct: 238 NRAGERVSVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSASYLGYSFD 297
Query: 296 IHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVME 355
IHGGGMDLVFPHHENEIAQSCAAC S++SYW+HNGFVTIDSEKMSKSLGNFFTIRQV++
Sbjct: 298 IHGGGMDLVFPHHENEIAQSCAACRTSNVSYWVHNGFVTIDSEKMSKSLGNFFTIRQVID 357
Query: 356 LYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSI 415
LYHPLALRLFL+GTHYRSPINYS + LESAS+RIFYIYQTL DC +S D ++ K I
Sbjct: 358 LYHPLALRLFLLGTHYRSPINYSDLLLESASDRIFYIYQTLDDCRTVISQEDESSFKGPI 417
Query: 416 PPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAA 475
P V INKF N FL SMSDD+HT VVLAALSDPLK INDLLHTRKGKKQ R+ESLAA
Sbjct: 418 APSLVEEINKFSNVFLTSMSDDIHTPVVLAALSDPLKIINDLLHTRKGKKQEFRMESLAA 477
Query: 476 LEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKS 535
LEK I NVL++LGLM YSE L QL+EKAL RA +T DQVLQ+IE+R ARKNKEYEKS
Sbjct: 478 LEKIIGNVLSILGLMPASYSEALQQLKEKALTRAKMTNDQVLQKIEERNAARKNKEYEKS 537
Query: 536 DAIRKDLAAVGIALMDSPVGTTWRPALPLALQEQAVATS 574
D+IR DLAAVGI+LMD P GTTWRP +PLALQE +++
Sbjct: 538 DSIRTDLAAVGISLMDGPNGTTWRPTVPLALQEHQASST 576
>gi|449517190|ref|XP_004165629.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 576
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/579 (74%), Positives = 479/579 (82%), Gaps = 8/579 (1%)
Query: 1 MGSLILTLKCYKPLASIKFSPFINSFHTLQ--LRPPKP---NNRRVFRCFSTLNSSPNVI 55
M SL LK Y PL +F+P S L+ LR N+ F F++ +S +
Sbjct: 1 MASL---LKFYNPLTLTRFTPVSLSLAFLRRTLRNSHFSFFNSATTFARFTSSPTSSQLP 57
Query: 56 DDKSNGKTDGDDKPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHA 115
N K + S S++LWL+NTMSRK+E+ KPKVEGKVGMYVCGVT YDLSHIGHA
Sbjct: 58 VSAPNLKEINALRHDSTSSELWLHNTMSRKKEVFKPKVEGKVGMYVCGVTAYDLSHIGHA 117
Query: 116 RVYVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMV 175
RVYVTFDVLYRYLRHLGYEV YVRNFTDVDDKIIARANELGEDP++LSRRYCEEF +DM+
Sbjct: 118 RVYVTFDVLYRYLRHLGYEVLYVRNFTDVDDKIIARANELGEDPLNLSRRYCEEFRRDMM 177
Query: 176 DLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLED 235
LHCLPPSVEP+VSDHMP IIDMI QILDNG+AY VDGDVYF+VDKFPEYGQLSGRKLED
Sbjct: 178 YLHCLPPSVEPQVSDHMPQIIDMIKQILDNGYAYCVDGDVYFNVDKFPEYGQLSGRKLED 237
Query: 236 NRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFD 295
NRAGERV+VDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSA+YLG+SFD
Sbjct: 238 NRAGERVSVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSASYLGYSFD 297
Query: 296 IHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVME 355
IHGGGMDLVFPHHENEIAQSCA C S++SYW+HNGFVTIDSEKMSKSLGNFFTIRQV++
Sbjct: 298 IHGGGMDLVFPHHENEIAQSCATCRTSNVSYWVHNGFVTIDSEKMSKSLGNFFTIRQVID 357
Query: 356 LYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSI 415
LYHPLALRLFL+GTHYRSPINYS + LESAS+RIFYIYQTL DC +S D ++ K SI
Sbjct: 358 LYHPLALRLFLLGTHYRSPINYSDLLLESASDRIFYIYQTLDDCRTVVSQEDESSFKGSI 417
Query: 416 PPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAA 475
P V INKF N FL SMSDD+HT VVLAALSDPLK INDLLHTRKGKKQ R+ESLAA
Sbjct: 418 APSLVEEINKFSNVFLTSMSDDIHTPVVLAALSDPLKIINDLLHTRKGKKQEFRMESLAA 477
Query: 476 LEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKS 535
LEK I NVL++LGLM YSE L QL+EKAL RA +T DQVLQ+IE+R ARKNKEYEKS
Sbjct: 478 LEKIIGNVLSILGLMPASYSEALQQLKEKALTRAKMTNDQVLQKIEERNAARKNKEYEKS 537
Query: 536 DAIRKDLAAVGIALMDSPVGTTWRPALPLALQEQAVATS 574
D+IR DLAAVGI+LMD P GTTWRP +PLALQE +++
Sbjct: 538 DSIRTDLAAVGISLMDGPNGTTWRPTVPLALQEHQASST 576
>gi|224141927|ref|XP_002324312.1| predicted protein [Populus trichocarpa]
gi|222865746|gb|EEF02877.1| predicted protein [Populus trichocarpa]
Length = 493
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/493 (83%), Positives = 452/493 (91%)
Query: 82 MSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNF 141
MSRK+EL KPKVEGKVGMYVCGVT YDLSHIGHARVYVTFDVL RYL+HLG++V YVRNF
Sbjct: 1 MSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGFDVHYVRNF 60
Query: 142 TDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQ 201
TDVDDKIIARANELGEDPISLS+RYCEEF DMV LHCLPPSVEPRVSDHMP IIDMI +
Sbjct: 61 TDVDDKIIARANELGEDPISLSKRYCEEFLHDMVYLHCLPPSVEPRVSDHMPQIIDMIER 120
Query: 202 ILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAK 261
IL+NG+AYR+DGDVYFSVDK PEYG+LSGRKLEDNRAGERVAVDSRKKNPADFALWKSAK
Sbjct: 121 ILENGYAYRIDGDVYFSVDKLPEYGRLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAK 180
Query: 262 EGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNN 321
EGEPFW+SPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAAC +
Sbjct: 181 EGEPFWDSPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACRD 240
Query: 322 SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYSVVQ 381
S+ISYW+HNGFVTIDSEKMSKSLGNFFTIRQV+ LYHPLALRLFL+GTHYRSP+NYS VQ
Sbjct: 241 SNISYWVHNGFVTIDSEKMSKSLGNFFTIRQVINLYHPLALRLFLLGTHYRSPVNYSDVQ 300
Query: 382 LESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDDLHTT 441
LESASERIFYIYQTLHDCE LS A KD+IPPDT+ INKFH+ + SMSDDLHT
Sbjct: 301 LESASERIFYIYQTLHDCENILSQHRVAFEKDAIPPDTINDINKFHDTLVTSMSDDLHTP 360
Query: 442 VVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEVLLQL 501
V+L+ALSDPLK IND+LHTRKGKKQ R+ES+AALEK +RN L VLGLM Y+E L QL
Sbjct: 361 VLLSALSDPLKIINDMLHTRKGKKQIKRIESIAALEKMVRNALMVLGLMPPTYNEALQQL 420
Query: 502 REKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPA 561
REKAL+RA LTEDQ+LQ+IE+RTVARK+K+YEKSDAIRKDLAA+GIALMDSP GT+WRPA
Sbjct: 421 REKALRRAKLTEDQILQKIEERTVARKDKDYEKSDAIRKDLAALGIALMDSPDGTSWRPA 480
Query: 562 LPLALQEQAVATS 574
+PLALQEQ VA++
Sbjct: 481 IPLALQEQQVAST 493
>gi|261599939|dbj|BAI45220.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/580 (72%), Positives = 477/580 (82%), Gaps = 13/580 (2%)
Query: 4 LILTLKCYKPLASIKFSPFINSFHTLQLRPPKPN-------NRRVFRCFSTLNSSPNVID 56
+++ +C KP SP S LQ P N N+RV R F ++ SS I+
Sbjct: 1 MVVLARCCKPFLPPYLSPLSLSEIPLQFYSPFSNKIRNYAINKRV-RFFCSMGSSQASIN 59
Query: 57 DKSN-----GKTDGDDKPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSH 111
+ G ++ + LW+YNTMSRK+E+ KPKV+GKVGMYVCGVT YD SH
Sbjct: 60 GNNGNNNWVGSSNNQQLEGAIKKDLWVYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSH 119
Query: 112 IGHARVYVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFH 171
IGHAR YVTFD+LYRYL++LGY+VCYVRNFTDVDDKIIARANE+GE+PISLSRR+C+EFH
Sbjct: 120 IGHARAYVTFDILYRYLKYLGYDVCYVRNFTDVDDKIIARANEVGENPISLSRRFCDEFH 179
Query: 172 QDMVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGR 231
QDM LHCLPPSVEPRVSDHMP IIDMI QI+DNGFAY VDGDVYFSV+KFP+YG+LSGR
Sbjct: 180 QDMSYLHCLPPSVEPRVSDHMPQIIDMIKQIVDNGFAYGVDGDVYFSVEKFPDYGRLSGR 239
Query: 232 KLEDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLG 291
KLEDNRAGERVA+DSRK+NPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMS+ YLG
Sbjct: 240 KLEDNRAGERVAIDSRKRNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSSVYLG 299
Query: 292 HSFDIHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIR 351
+SFDIHGGGMDL+FPHHENEI QSCAAC S+I YW+HNGFVTI+SEKMSKSLGNFFTIR
Sbjct: 300 YSFDIHGGGMDLMFPHHENEIVQSCAACCESNIRYWVHNGFVTINSEKMSKSLGNFFTIR 359
Query: 352 QVMELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAAL 411
QV+ELYHPLALRLFL+GTHYRSPINYS V LESASERIFYIYQTL D + LS A L
Sbjct: 360 QVIELYHPLALRLFLMGTHYRSPINYSDVLLESASERIFYIYQTLQDSQALLSEYGRANL 419
Query: 412 KDSIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLE 471
KDSIP D V+ IN N F+ SMSDDLHT VVLAALSDPLKTINDLLHTRKGKK+ +R+E
Sbjct: 420 KDSIPQDIVSCINDLQNSFVISMSDDLHTPVVLAALSDPLKTINDLLHTRKGKKRELRVE 479
Query: 472 SLAALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKE 531
SLAALEKTI++VLT LGLM + YSE L QLREKALKR +E +V Q+IE+R +ARKNKE
Sbjct: 480 SLAALEKTIKHVLTALGLMPSSYSEALHQLREKALKRVKFSETEVQQKIEERDMARKNKE 539
Query: 532 YEKSDAIRKDLAAVGIALMDSPVGTTWRPALPLALQEQAV 571
YEKSDAIRK+LAAVGIALMDSP GTTWRP +P ALQ++ V
Sbjct: 540 YEKSDAIRKELAAVGIALMDSPEGTTWRPVVPTALQQEPV 579
>gi|261599941|dbj|BAI45221.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/580 (72%), Positives = 476/580 (82%), Gaps = 13/580 (2%)
Query: 4 LILTLKCYKPLASIKFSPFINSFHTLQLRPPKPN-------NRRVFRCFSTLNSSPNVID 56
+++ +C KP SP S LQ P N N+RV R F ++ SS I+
Sbjct: 1 MVVLARCCKPFLPPYLSPLSLSEIPLQFYSPFSNKIRNYAINKRV-RFFCSMGSSQASIN 59
Query: 57 DKSN-----GKTDGDDKPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSH 111
+ G ++ + LW+YNTMSRK+E+ KPKV+GKVGMYVCGVT YD SH
Sbjct: 60 GNNGNNNWVGSSNNQQLEGAIKKDLWVYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSH 119
Query: 112 IGHARVYVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFH 171
IGHAR YVTFD+LYRYL++LGY+VCYVRNFTDVDDKIIARANE+GE+PISLSRR+C+EFH
Sbjct: 120 IGHARAYVTFDILYRYLKYLGYDVCYVRNFTDVDDKIIARANEVGENPISLSRRFCDEFH 179
Query: 172 QDMVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGR 231
QDM LHCLPPSVEPRVSDHMP IIDMI QI+DNGFAY VDGDVYFSV+KFP+YG+LSGR
Sbjct: 180 QDMSYLHCLPPSVEPRVSDHMPQIIDMIKQIVDNGFAYGVDGDVYFSVEKFPDYGRLSGR 239
Query: 232 KLEDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLG 291
KLEDNRAGERVA+DSRK+NPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMS+ YLG
Sbjct: 240 KLEDNRAGERVAIDSRKRNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSSVYLG 299
Query: 292 HSFDIHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIR 351
+SFDIHGGGMDL+FPHHENEI QSCAAC S+I YW+HNGFVTI+SEKMSKSLGNFFTIR
Sbjct: 300 YSFDIHGGGMDLMFPHHENEIVQSCAACCESNIRYWVHNGFVTINSEKMSKSLGNFFTIR 359
Query: 352 QVMELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAAL 411
QV+ELYHPLALRLFL+GTHYRSPINYS V LESASERIFYIYQTL D + LS A L
Sbjct: 360 QVIELYHPLALRLFLMGTHYRSPINYSDVLLESASERIFYIYQTLQDSQALLSEYGRANL 419
Query: 412 KDSIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLE 471
KDSIP D V+ IN N F+ SMSDDLHT VVLAALSDPLKTINDLLHTRKGKK+ +R+E
Sbjct: 420 KDSIPQDIVSCINDLQNSFVISMSDDLHTPVVLAALSDPLKTINDLLHTRKGKKRELRVE 479
Query: 472 SLAALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKE 531
SLAALEKTI++VLT LGLM + YSE L QLREKALKR +E +V Q+IE+R +ARK KE
Sbjct: 480 SLAALEKTIKHVLTALGLMPSSYSEALHQLREKALKRVKFSETEVQQKIEERDMARKYKE 539
Query: 532 YEKSDAIRKDLAAVGIALMDSPVGTTWRPALPLALQEQAV 571
YEKSDAIRK+LAAVGIALMDSP GTTWRP +P ALQ++ V
Sbjct: 540 YEKSDAIRKELAAVGIALMDSPEGTTWRPVVPTALQQEPV 579
>gi|356515262|ref|XP_003526320.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 561
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/570 (72%), Positives = 470/570 (82%), Gaps = 16/570 (2%)
Query: 3 SLILTLKCYKPLASIKFSPFINSFHTLQLRPPKPN----NRRVFRCFSTLNSSPNVIDDK 58
S + LKCY+P S+ F H+ PP+P+ R+ F F +S P + +K
Sbjct: 2 STVSLLKCYRPFFSMLFP------HSA---PPRPHASIFRRKNFPSFCATSSPPPLTAEK 52
Query: 59 SNGKTDGDDKPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVY 118
GK D + A ++WL+NTMS+ +EL KPKV+ KVGMYVCGVT YDLSHIGHARVY
Sbjct: 53 GCGKFDSE---GLALPEVWLHNTMSKTKELFKPKVDSKVGMYVCGVTAYDLSHIGHARVY 109
Query: 119 VTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLH 178
V FD+LYRY +HLG++VCYVRNFTDVDDKIIARA ELGEDPISLSRRYCEEF QDMV L+
Sbjct: 110 VNFDLLYRYFKHLGFQVCYVRNFTDVDDKIIARAKELGEDPISLSRRYCEEFCQDMVTLN 169
Query: 179 CLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRA 238
CL PSVEP+VS+HMP IIDMI +IL+NG+AY VDGDVYF+V+KFPEYG+LS R LEDNRA
Sbjct: 170 CLSPSVEPKVSEHMPQIIDMIEKILNNGYAYIVDGDVYFNVEKFPEYGKLSSRDLEDNRA 229
Query: 239 GERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHG 298
GERVAVDSRKKNPADFALWKSAK GEPFWES WGPGRPGWHIECSAMSAAYLG+SFDIHG
Sbjct: 230 GERVAVDSRKKNPADFALWKSAKPGEPFWESRWGPGRPGWHIECSAMSAAYLGYSFDIHG 289
Query: 299 GGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYH 358
GG+DLVFPHHENEIAQSCAAC S IS W+HNGFVTIDS KMSKSLGNFFTIRQV+++YH
Sbjct: 290 GGIDLVFPHHENEIAQSCAACKKSDISVWMHNGFVTIDSVKMSKSLGNFFTIRQVIDIYH 349
Query: 359 PLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPD 418
PLALR FL+ HYRSPINYS +QLESAS+R+FYIY+TLH+CE L+ D KDSIPPD
Sbjct: 350 PLALRYFLMSAHYRSPINYSNIQLESASDRVFYIYETLHECESFLNQHDQTIRKDSIPPD 409
Query: 419 TVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEK 478
T+ I+KFH+ FL SMSDDLHT VVLA +SDPLK+INDLLHTRKGKKQ R+ESL+ALEK
Sbjct: 410 TLDIIDKFHDVFLTSMSDDLHTPVVLAGMSDPLKSINDLLHTRKGKKQQFRIESLSALEK 469
Query: 479 TIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAI 538
++R+VLTVLGLM Y EVL QL+EKALKRA+LTED VLQ+IE+R AR KEY KSDAI
Sbjct: 470 SVRDVLTVLGLMPASYFEVLQQLKEKALKRANLTEDDVLQKIEERAAARIQKEYAKSDAI 529
Query: 539 RKDLAAVGIALMDSPVGTTWRPALPLALQE 568
RKDLA VGI LMDSP GTTWRPA+PL LQE
Sbjct: 530 RKDLAVVGITLMDSPNGTTWRPAIPLPLQE 559
>gi|296082122|emb|CBI21127.3| unnamed protein product [Vitis vinifera]
Length = 474
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/475 (85%), Positives = 436/475 (91%), Gaps = 1/475 (0%)
Query: 99 MYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGED 158
MYVCGVT YDLSHIGHARVYV+FDVLYRYLRHL YEV YVRNFTDVDDKIIARANE+GED
Sbjct: 1 MYVCGVTAYDLSHIGHARVYVSFDVLYRYLRHLEYEVNYVRNFTDVDDKIIARANEMGED 60
Query: 159 PISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFS 218
PI+LSRRYC+EFH DM LHCLPPSVEP VSDHMP IIDMI QI+DN AYRV+GDVYFS
Sbjct: 61 PINLSRRYCQEFHVDMTYLHCLPPSVEPCVSDHMPQIIDMIKQIIDNDCAYRVEGDVYFS 120
Query: 219 VDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGW 278
VDKFPEYG+LSGRK+EDNRAGERVAVDSRKKNPADFALWK+AK+GEPFW+SPWGPGRPGW
Sbjct: 121 VDKFPEYGRLSGRKVEDNRAGERVAVDSRKKNPADFALWKAAKKGEPFWDSPWGPGRPGW 180
Query: 279 HIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSE 338
HIECSAMSAAYLG+SFDIHGGGMDLVFPHHENEIAQSCAAC S+ISYWIHNGFVTIDSE
Sbjct: 181 HIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACKQSNISYWIHNGFVTIDSE 240
Query: 339 KMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHD 398
KMSKSLGNFFTIRQV+++YHPLALRLFLIGTHYRSPINYS VQLESAS+R+FYIYQTLHD
Sbjct: 241 KMSKSLGNFFTIRQVIDIYHPLALRLFLIGTHYRSPINYSDVQLESASDRVFYIYQTLHD 300
Query: 399 CEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLL 458
C+ A+ D KDS+PP + INKF+NDFL SMSDDLHT VVLAALSDPLKTINDLL
Sbjct: 301 CQNAMD-QDDMTKKDSVPPHILDCINKFYNDFLTSMSDDLHTPVVLAALSDPLKTINDLL 359
Query: 459 HTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQ 518
HTRKGKKQ +RLESLAALEK IR+VLT+LGLM YSE LLQLREKALKR+ LTED +LQ
Sbjct: 360 HTRKGKKQELRLESLAALEKVIRDVLTILGLMPASYSEALLQLREKALKRSKLTEDHILQ 419
Query: 519 RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPALPLALQEQAVAT 573
+IE+RT+ARKNKEYEKSDAIRKDLAAVGIALMDSP GTTWRPA+PLALQEQ AT
Sbjct: 420 KIEERTMARKNKEYEKSDAIRKDLAAVGIALMDSPDGTTWRPAIPLALQEQVAAT 474
>gi|13877761|gb|AAK43958.1|AF370143_1 putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|15293251|gb|AAK93736.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|20197327|gb|AAM15026.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|20197896|gb|AAD20662.2| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 493
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/492 (81%), Positives = 442/492 (89%)
Query: 82 MSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNF 141
MSRK+EL KPKVEGKVGMYVCGVT YDLSHIGHARVYVTFDVL RYL+HLGYEV YVRNF
Sbjct: 1 MSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGYEVSYVRNF 60
Query: 142 TDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQ 201
TDVDDKIIARA EL EDPISLSRR+CEEF++DM L CL PSV+PRVSDH+P IID+I Q
Sbjct: 61 TDVDDKIIARAKELEEDPISLSRRFCEEFNRDMEQLQCLDPSVQPRVSDHIPQIIDLIKQ 120
Query: 202 ILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAK 261
ILDNG+AY+VDGD+YFSVDKFP YG+LSGRKLEDNRAGERVAVD+RKK+PADFALWK+AK
Sbjct: 121 ILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPADFALWKAAK 180
Query: 262 EGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNN 321
EGEPFWESPWG GRPGWHIECSAMSAAYLG+SFDIHGGGMDLVFPHHENEIAQSCAAC++
Sbjct: 181 EGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACDS 240
Query: 322 SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYSVVQ 381
S+ISYWIHNGFVT+DSEKMSKSLGNFFTIRQV++LYHPLALRLFL+GTHYRSPINYS
Sbjct: 241 SNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLMGTHYRSPINYSDFL 300
Query: 382 LESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDDLHTT 441
LESASERIFYIYQTLHDCE AL D+ S+P DT+TSIN F +F+ASMSDDL T
Sbjct: 301 LESASERIFYIYQTLHDCESALGEKDSTFENGSVPSDTLTSINTFRTEFVASMSDDLLTP 360
Query: 442 VVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEVLLQL 501
V LAA+S+PLKTINDL+HTRKGKKQA R ESL ALE TIR+VLT+LGLM T YSEVL QL
Sbjct: 361 VTLAAMSEPLKTINDLIHTRKGKKQARREESLKALETTIRDVLTILGLMPTSYSEVLEQL 420
Query: 502 REKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPA 561
+EKALKRA L E+ VLQR+++RT ARKNKEYE+SDAIRKDLA VGIALMDSP GTTWRPA
Sbjct: 421 KEKALKRAGLKEEDVLQRVQERTDARKNKEYERSDAIRKDLAKVGIALMDSPEGTTWRPA 480
Query: 562 LPLALQEQAVAT 573
+PLALQE T
Sbjct: 481 IPLALQEPVTTT 492
>gi|356509902|ref|XP_003523681.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 557
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/571 (72%), Positives = 471/571 (82%), Gaps = 19/571 (3%)
Query: 1 MGSLILTLKCYKPLASIKFSPFINSFHTLQLRPPKPNNRRVFRC--FS-TLNSSPNVIDD 57
MG++ L LKCY+P S+ F H+ PP+ + +FR FS SSP + +
Sbjct: 1 MGTVSL-LKCYRPFFSMLFP------HS---APPR-LHAAIFRSKNFSFCATSSPPLTAE 49
Query: 58 KSNGKTDGDDKPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARV 117
K GK+D + ++WL+NTMSR +EL KPKVE KVGMYVCGVT YDLSHIGHARV
Sbjct: 50 KGCGKSDAE---CPTLPEVWLHNTMSRTKELFKPKVESKVGMYVCGVTAYDLSHIGHARV 106
Query: 118 YVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDL 177
YV FD+LYRY +HLG+EVCYVRNFTDVDDKIIARA ELGEDPISLS RYCEEF QDMV L
Sbjct: 107 YVNFDLLYRYFKHLGFEVCYVRNFTDVDDKIIARAKELGEDPISLSWRYCEEFCQDMVTL 166
Query: 178 HCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNR 237
+CL PSVEP+VS+HMP IIDMI +IL+NG+AY VDGDVYF+V+KFPEYG+LS R LEDNR
Sbjct: 167 NCLSPSVEPKVSEHMPQIIDMIEKILNNGYAYIVDGDVYFNVEKFPEYGKLSSRDLEDNR 226
Query: 238 AGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIH 297
AGERVAVDSRKKNPADFALWKSAK GEPFWESPWGPGRPGWHIECSAMSAAYLG+SFDIH
Sbjct: 227 AGERVAVDSRKKNPADFALWKSAKPGEPFWESPWGPGRPGWHIECSAMSAAYLGYSFDIH 286
Query: 298 GGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELY 357
GGG+DLVFPHHENEIAQSCAAC S IS W+HNGFVTIDS KMSKSLGNFFTIRQV+++Y
Sbjct: 287 GGGIDLVFPHHENEIAQSCAACKKSDISIWMHNGFVTIDSVKMSKSLGNFFTIRQVIDVY 346
Query: 358 HPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPP 417
HPLALR FL+ HYRSPINYS +QLESAS+R+FYIY+TLH+CE L+ D KDS PP
Sbjct: 347 HPLALRYFLMSAHYRSPINYSNIQLESASDRVFYIYETLHECESFLNQHDQR--KDSTPP 404
Query: 418 DTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALE 477
DT+ I+KFH+ FL SMSDDLHT VVLA +SDPLK+INDLLH RKGKKQ R+ESL+ALE
Sbjct: 405 DTLDIIDKFHDVFLTSMSDDLHTPVVLAGMSDPLKSINDLLHARKGKKQQFRIESLSALE 464
Query: 478 KTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDA 537
K++R+VLTVLGLM YSEVL QL+ KALKRA+ TE++VLQ+IE+R AR KEY KSDA
Sbjct: 465 KSVRDVLTVLGLMPASYSEVLQQLKVKALKRANFTEEEVLQKIEERATARMQKEYAKSDA 524
Query: 538 IRKDLAAVGIALMDSPVGTTWRPALPLALQE 568
IRKDLA +GI LMDSP GTTWRPA+PL LQE
Sbjct: 525 IRKDLAVLGITLMDSPNGTTWRPAIPLPLQE 555
>gi|357466121|ref|XP_003603345.1| Cysteinyl tRNA synthetase [Medicago truncatula]
gi|355492393|gb|AES73596.1| Cysteinyl tRNA synthetase [Medicago truncatula]
Length = 608
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/614 (64%), Positives = 467/614 (76%), Gaps = 52/614 (8%)
Query: 1 MGSLILTLKCYKPLASIKFSPFINSFHTLQLRPPKPNN-RRVFR-----CFSTLNSSPNV 54
MG+L L+L + ++PF + T R P + VFR F ++SS
Sbjct: 1 MGTLTLSLLKH-------YTPFSTTLFTHSSRTLSPGHLSAVFRRKNLPSFRAISSSSQP 53
Query: 55 IDDKSNGKTDGDD-KPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIG 113
+ + N G++ + S S ++WL+NTMS+K+EL KPKVE KVGMYVCGVT YDLSHIG
Sbjct: 54 LTAEKNSHDGGENSRSKSPSPEVWLHNTMSKKKELFKPKVEKKVGMYVCGVTAYDLSHIG 113
Query: 114 HARVYVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQD 173
HARVYV FD+LYRY +HLG++VCYVRNFTDVDDKIIAR+ ELGEDPISLSRRYCEEF QD
Sbjct: 114 HARVYVNFDLLYRYFKHLGFQVCYVRNFTDVDDKIIARSKELGEDPISLSRRYCEEFCQD 173
Query: 174 MVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKL 233
MV L+CLP +VEP+VS+HMP II+MI +IL+NG+AY VDGD+YF+V+KFPEYG+LS R L
Sbjct: 174 MVTLNCLPATVEPKVSEHMPQIIEMIEKILNNGYAYDVDGDIYFNVEKFPEYGKLSSRGL 233
Query: 234 EDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHS 293
EDNRAGERVAVDSRKKNPADFALWKS K GEPFWESPWGPGRPGWHIECSAMSAAYLG+S
Sbjct: 234 EDNRAGERVAVDSRKKNPADFALWKSTKPGEPFWESPWGPGRPGWHIECSAMSAAYLGYS 293
Query: 294 FDIHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQV 353
FDIHGGG+DLVFPHHENEIAQSCAAC+ S IS W+HNGFVTIDS KMSKSLGNFFTIRQV
Sbjct: 294 FDIHGGGIDLVFPHHENEIAQSCAACSKSDISVWMHNGFVTIDSVKMSKSLGNFFTIRQV 353
Query: 354 MELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKD 413
+++YHPLALR FL+ HYRSP+NYS + LESAS+R+FYIY+TLH+CE L D KD
Sbjct: 354 VDVYHPLALRYFLMSAHYRSPMNYSNIHLESASDRVFYIYETLHECESFLKQHDQTVRKD 413
Query: 414 SIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRK----------- 462
S+PPDT++ I F++ F SMSDDLHT V LA +SDPLK INDLLHTRK
Sbjct: 414 SVPPDTLSIIGNFYDVFRTSMSDDLHTPVALAGMSDPLKLINDLLHTRKWISGRARHHSI 473
Query: 463 ---------------------------GKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
GKKQ R+ESLAAL+K+I +VLTVLGLM + Y
Sbjct: 474 KNTIIREKIVVHVILQNMKDSRLRWFGGKKQQFRIESLAALKKSIGDVLTVLGLMPSSYY 533
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
EVL QL+EKAL RA+LTED++L++IE+R AR KEY KSD+IRK LA +GIALMDSP G
Sbjct: 534 EVLQQLKEKALNRANLTEDEILKKIEERDAARIQKEYAKSDSIRKGLAVLGIALMDSPNG 593
Query: 556 TTWRPALPLALQEQ 569
TTWRP +PL LQEQ
Sbjct: 594 TTWRPTIPLPLQEQ 607
>gi|115480611|ref|NP_001063899.1| Os09g0556500 [Oryza sativa Japonica Group]
gi|113632132|dbj|BAF25813.1| Os09g0556500 [Oryza sativa Japonica Group]
gi|125606594|gb|EAZ45630.1| hypothetical protein OsJ_30298 [Oryza sativa Japonica Group]
Length = 569
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/507 (71%), Positives = 426/507 (84%), Gaps = 4/507 (0%)
Query: 69 PASASTQLWLYNTMSRKRELVKPKVEG-KVGMYVCGVTPYDLSHIGHARVYVTFDVLYRY 127
PA + +L LYNT SR++EL +P+V G +VGMYVCGVTPYD SHIGHAR YV FDVLYRY
Sbjct: 65 PAGRARELHLYNTKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRY 124
Query: 128 LRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPR 187
LR+L ++V YVRNFTD+DDKIIARAN+LGEDP SLS+RY ++F DM +LHCLPPSVEPR
Sbjct: 125 LRYLDHKVRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDDFLSDMANLHCLPPSVEPR 184
Query: 188 VSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSR 247
VSDH+ II+MI QI+DN AY + GDVYFSV+ FPEYG LSGRKL+DNRAGERVAVD R
Sbjct: 185 VSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKLDDNRAGERVAVDER 244
Query: 248 KKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPH 307
KKNPADFALWK+AK+GEP W+SPWGPGRPGWHIECSAMSA YLGHSFDIHGGG DL+FPH
Sbjct: 245 KKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPH 304
Query: 308 HENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLI 367
HENEIAQS AAC +S I+YWIHNGFV ++S+KMSKSLGNF TIR+V ELYHPLALR+FL+
Sbjct: 305 HENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVTELYHPLALRMFLL 364
Query: 368 GTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH 427
GTHYRSPINY++ QL AS+R++Y YQTL DCE++ + A D +P +T I K H
Sbjct: 365 GTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKA-GDPLPVNTTNCIQKLH 423
Query: 428 NDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVL 487
++F SMSDDLHT+V LAA+S+PLK +NDLLHTRKGKKQ RLESL+A+E+ IR VL+VL
Sbjct: 424 DEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQEKRLESLSAMEEKIRMVLSVL 483
Query: 488 GLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGI 547
GL+ + Y E L QLREKAL+RA +TE+QVLQ+IE+RT ARK K+YEKSD IRK+LAAVGI
Sbjct: 484 GLLPSSYYEALQQLREKALRRASMTEEQVLQKIEERTSARKAKQYEKSDEIRKELAAVGI 543
Query: 548 ALMDSPVGTTWRPALPLALQEQAVATS 574
ALMD P GTTWRP++PL+ EQ V S
Sbjct: 544 ALMDGPDGTTWRPSVPLS--EQGVVAS 568
>gi|125564667|gb|EAZ10047.1| hypothetical protein OsI_32351 [Oryza sativa Indica Group]
Length = 569
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/503 (71%), Positives = 424/503 (84%), Gaps = 4/503 (0%)
Query: 73 STQLWLYNTMSRKRELVKPKVEG-KVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHL 131
+ +L LYNT SR++EL +P+V G +VGMYVCGVTPYD SHIGHAR YV FDVLYRYLR+L
Sbjct: 69 ARELHLYNTKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYLRYL 128
Query: 132 GYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDH 191
++V YVRNFTD+DDKIIARAN+LGEDP SLS+RY ++F DM +LHCLPPSVEPRVSDH
Sbjct: 129 DHKVRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDDFLSDMANLHCLPPSVEPRVSDH 188
Query: 192 MPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNP 251
+ II+MI QI+DN AY + GDVYFSV+ FPEYG LSGRKL+DNRAGERVAVD RKKNP
Sbjct: 189 IDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKLDDNRAGERVAVDERKKNP 248
Query: 252 ADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
ADFALWK+AK+GEP W+SPWGPGRPGWHIECSAMSA YLGHSFDIHGGG DL+FPHHENE
Sbjct: 249 ADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENE 308
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS AAC +S I+YWIHNGFV ++S+KMSKSLGNF TIR+V ELYHPLALR+FL+GTHY
Sbjct: 309 IAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVTELYHPLALRMFLLGTHY 368
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RSPINY++ QL AS+R++Y YQTL DCE++ + A D +P +T I K H++F
Sbjct: 369 RSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKA-GDPLPVNTTNCIQKLHDEFE 427
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
SMSDDLHT+V LAA+S+PLK +NDLLHTRKGKKQ RLESL+A+E+ IR VL+VLGL+
Sbjct: 428 TSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQEKRLESLSAMEEKIRMVLSVLGLLP 487
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ Y E L QLREKAL+RA +TE+QVLQ+IE+RT ARK K+YEKSD IRK+LAAVGIALMD
Sbjct: 488 SSYYEALQQLREKALRRASMTEEQVLQKIEERTSARKAKQYEKSDEIRKELAAVGIALMD 547
Query: 552 SPVGTTWRPALPLALQEQAVATS 574
P GTTWRP++PL+ EQ V S
Sbjct: 548 GPDGTTWRPSVPLS--EQGVVAS 568
>gi|357159997|ref|XP_003578624.1| PREDICTED: cysteinyl-tRNA synthetase-like [Brachypodium distachyon]
Length = 567
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/499 (71%), Positives = 416/499 (83%), Gaps = 2/499 (0%)
Query: 70 ASASTQLWLYNTMSRKRELVKPKVEG-KVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYL 128
A + L LYNT SR+REL +P+ G +VGMYVCGVTPYD SHIGHAR YV FDVL+RYL
Sbjct: 63 AERARDLHLYNTKSRRRELFRPRAPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLFRYL 122
Query: 129 RHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRV 188
R+L YEV YVRNFTD+DDKIIARAN+LGEDP SLS+RY + F DM L CLPPSVEPRV
Sbjct: 123 RYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDAFLSDMAHLQCLPPSVEPRV 182
Query: 189 SDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRK 248
SDH+ I++MI QILDNG AY V GDVYFSVD FPEYG LSGRKL+DNRAGER+AVD RK
Sbjct: 183 SDHIDQIVNMIKQILDNGCAYVVSGDVYFSVDNFPEYGMLSGRKLDDNRAGERIAVDERK 242
Query: 249 KNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHH 308
KNPADFALWK+AK+GEP+W+SPWGPGRPGWHIECSAMSA YLG+SFDIHGGG DL+FPHH
Sbjct: 243 KNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAQYLGNSFDIHGGGEDLIFPHH 302
Query: 309 ENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIG 368
ENEIAQS AAC +S I+YWIHNGFV ++S+KMSKSLGNF TIR+V+E YHPLALR+FL+G
Sbjct: 303 ENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEQYHPLALRMFLLG 362
Query: 369 THYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHN 428
THYRSPINY+V QL AS+R++Y YQTL D E++ + D +D++P T I K N
Sbjct: 363 THYRSPINYTVEQLNVASDRLYYTYQTLRDSEES-TQKDQINSEDALPATTTHCIEKLQN 421
Query: 429 DFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLG 488
+F SMSDDLHT+V LAA+S+PLK +NDLLHTRKGKKQ RLESL ALE+ IR VL+VLG
Sbjct: 422 EFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQEKRLESLFALEEKIRTVLSVLG 481
Query: 489 LMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIA 548
LM + Y E L QLREKAL+RA +TEDQVLQ+IE+RT ARK K+YEKSD IRK+LAA+GIA
Sbjct: 482 LMPSSYYEALQQLREKALQRASITEDQVLQKIEERTSARKAKQYEKSDEIRKELAALGIA 541
Query: 549 LMDSPVGTTWRPALPLALQ 567
LMD P GTTWRP++P + Q
Sbjct: 542 LMDGPDGTTWRPSVPFSEQ 560
>gi|242050146|ref|XP_002462817.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
gi|241926194|gb|EER99338.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
Length = 571
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/506 (70%), Positives = 427/506 (84%), Gaps = 3/506 (0%)
Query: 70 ASASTQLWLYNTMSRKRELVKPK-VEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYL 128
A + +L LYNT SRK+E +P+ G+VGMYVCGVTPYD SHIGHAR YV FDVLYRYL
Sbjct: 68 AERTRELHLYNTKSRKKEQFRPRDPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYL 127
Query: 129 RHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRV 188
R+L YEV YVRNFTD+DDKIIARAN+LGEDP SLS+R+ ++F DM +L CLPPSVEPRV
Sbjct: 128 RYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRFSDDFLSDMANLQCLPPSVEPRV 187
Query: 189 SDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRK 248
SDH+ II+MI QILDN AY V GDVYFSV+ FPEYG+LSGRKL+DNRAGERVAVD RK
Sbjct: 188 SDHIHEIINMIKQILDNSCAYVVGGDVYFSVENFPEYGELSGRKLDDNRAGERVAVDERK 247
Query: 249 KNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHH 308
+NPADFALWK+AK+GEP+W+SPWGPGRPGWHIECSAMSA YLGHSFDIHGGG DL+FPHH
Sbjct: 248 RNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPHH 307
Query: 309 ENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIG 368
ENEIAQS AAC +S I+YWIHNGFV ++S+KMSKSLGNF TIR+V+E+YHPLALR+FL+G
Sbjct: 308 ENEIAQSRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEMYHPLALRMFLLG 367
Query: 369 THYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHN 428
THYRSPINY++ QL AS+R++Y YQTL DCE++ + +S+PP+T+ I K H+
Sbjct: 368 THYRSPINYTIEQLNVASDRLYYTYQTLRDCEESCQ-QQGSNTGNSLPPNTLNYIQKLHD 426
Query: 429 DFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLG 488
+F SMSDDLHT+V LAA+S+PLK +NDLLHTRKGKKQ RLE+L+AL++ IR VL+VLG
Sbjct: 427 EFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQDKRLEALSALDEKIRVVLSVLG 486
Query: 489 LMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIA 548
L+ + Y E L QLR+KAL+RA +TE+ VLQ+IE+RT ARK K+YEKSD IRK+LAAVGIA
Sbjct: 487 LLPSSYHEALQQLRDKALRRASITEELVLQKIEERTAARKAKQYEKSDEIRKELAAVGIA 546
Query: 549 LMDSPVGTTWRPALPLALQEQAVATS 574
LMD P GTTWRP+LPL+ +E VA +
Sbjct: 547 LMDGPNGTTWRPSLPLS-EEAVVAKT 571
>gi|414873768|tpg|DAA52325.1| TPA: chloroplast protein synthesis1 [Zea mays]
Length = 564
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/518 (69%), Positives = 428/518 (82%), Gaps = 12/518 (2%)
Query: 68 KPASAST----------QLWLYNTMSRKRELVKPKVEGK-VGMYVCGVTPYDLSHIGHAR 116
KP SAS +L LYNT SRK+E +P++ G+ VGMYVCGVTPYD SHIGHAR
Sbjct: 48 KPFSASASNGAATDRTRELRLYNTKSRKKEQFRPRIPGREVGMYVCGVTPYDDSHIGHAR 107
Query: 117 VYVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVD 176
YV FDVLYRYLR+L YEV YVRNFTD+DDKIIARAN+LGEDP SLS+R+ ++F DM +
Sbjct: 108 AYVAFDVLYRYLRYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRFSDDFLSDMAN 167
Query: 177 LHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDN 236
L CLPPSVEPRVSDH+ II+MI QILDN AY V GDVYFSVD FPEYG+LSGRKL+DN
Sbjct: 168 LQCLPPSVEPRVSDHVDEIINMIKQILDNRCAYVVGGDVYFSVDNFPEYGELSGRKLDDN 227
Query: 237 RAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDI 296
RAGERVAVD RK+NPADFALWK+AK+GEP+W+SPWGPGRPGWHIECSAMSA YLGHSFDI
Sbjct: 228 RAGERVAVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDI 287
Query: 297 HGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMEL 356
HGGG DL+FPHHENEIAQS AAC +S I+YWIHNGFV ++S+KMSKSLGNF TIR+V+E+
Sbjct: 288 HGGGEDLIFPHHENEIAQSRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEM 347
Query: 357 YHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIP 416
YHPLALR+FL+GTHYRSPINY++ QL AS+R++Y YQTL DCE+ + + + +P
Sbjct: 348 YHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCEE-ICQHQQSNTGNPLP 406
Query: 417 PDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAAL 476
+T+ I K H++F SMSDDLHT+V LAA+S+PLK +NDLLHTRKGKKQ RLESL+AL
Sbjct: 407 ANTLNYIQKLHDEFETSMSDDLHTSVALAAMSEPLKVMNDLLHTRKGKKQDKRLESLSAL 466
Query: 477 EKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSD 536
E+ IR VL+VLGL+ + Y E L QLR+KAL+RA +TE+ V+Q+IE+RT ARK K+YEKSD
Sbjct: 467 EEKIRVVLSVLGLLPSSYHEALQQLRDKALRRASITEELVVQKIEERTAARKAKQYEKSD 526
Query: 537 AIRKDLAAVGIALMDSPVGTTWRPALPLALQEQAVATS 574
IRK+LAAVGIALMD P GTTWRP+LPL +E +A +
Sbjct: 527 EIRKELAAVGIALMDGPDGTTWRPSLPLPEEEAVLAKT 564
>gi|148909295|gb|ABR17747.1| unknown [Picea sitchensis]
Length = 602
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/500 (69%), Positives = 417/500 (83%), Gaps = 1/500 (0%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
T L+++NTMS+K+EL K + GKVGMYVCGVT YD SHIGHARVYVTFD+LYRYL+ LGY
Sbjct: 103 TDLYIFNTMSKKKELFKAREPGKVGMYVCGVTAYDYSHIGHARVYVTFDILYRYLQRLGY 162
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
EV YVRNFTD+DDKII+RAN+LGE+P+SLS R+C+EF DM +L+CLPPSVEPRV+DH+
Sbjct: 163 EVKYVRNFTDIDDKIISRANDLGENPLSLSNRFCKEFQVDMAELNCLPPSVEPRVTDHIN 222
Query: 194 HIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
II+MI QIL NG+AY V+ GDVYFSVDK+P+YG LSGRKL+DNRAGER+AVDSRK+NPA
Sbjct: 223 QIIEMIQQILRNGYAYVVENGDVYFSVDKYPKYGCLSGRKLDDNRAGERIAVDSRKQNPA 282
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DFALWKSAK EPFW+SPWGPGRPGWHIECSAMSAA+LG+ FDIHGGG+DL+FPHHENEI
Sbjct: 283 DFALWKSAKPSEPFWDSPWGPGRPGWHIECSAMSAAHLGYCFDIHGGGVDLIFPHHENEI 342
Query: 313 AQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
AQSCA+CN+S++ YWIHNGFVT+D+EKMSKSLGNFFTIR+V+E YHPLALRLFL GTHYR
Sbjct: 343 AQSCASCNDSNVPYWIHNGFVTVDAEKMSKSLGNFFTIREVLESYHPLALRLFLSGTHYR 402
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
S +NYS QLE+ASER+FYIYQTL DCE+ LS ++ IP D IN HN F +
Sbjct: 403 SQLNYSKSQLENASERLFYIYQTLKDCEECLSGHVRQSIGQPIPEDIQKRINNIHNAFSS 462
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
SMS+DLH + L ALS+PLK +NDL+ TR+G+KQ +R+E L +LE R++L+ LGLMS
Sbjct: 463 SMSNDLHIAMALDALSEPLKIMNDLMFTRQGRKQKLRMEFLDSLEVKTRDLLSDLGLMSP 522
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
YSEVLLQL+ KAL+RA +TED+VLQ IE R AR K Y +SD IR+ LA +GIALMD
Sbjct: 523 SYSEVLLQLKSKALRRAGITEDEVLQAIEKRADARAAKNYSESDRIRRKLAVLGIALMDE 582
Query: 553 PVGTTWRPALPLALQEQAVA 572
P GTTWRPA+PL +E +
Sbjct: 583 PSGTTWRPAIPLEEEEHVTS 602
>gi|212723404|ref|NP_001131561.1| uncharacterized protein LOC100192902 [Zea mays]
gi|194691858|gb|ACF80013.1| unknown [Zea mays]
gi|414590163|tpg|DAA40734.1| TPA: hypothetical protein ZEAMMB73_139992 [Zea mays]
Length = 573
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/506 (68%), Positives = 424/506 (83%), Gaps = 3/506 (0%)
Query: 70 ASASTQLWLYNTMSRKRELVKPK-VEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYL 128
A + +L LYNT SRK+E +P+ G+VGMYVCG+TPYD SHIGHAR YV FDV+YRYL
Sbjct: 70 AERTRELHLYNTKSRKKEQFRPRDPGGEVGMYVCGITPYDDSHIGHARAYVAFDVVYRYL 129
Query: 129 RHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRV 188
R+L YEV YVRNFTD+DDKIIARAN+LGEDP +LS+R+ ++F DM +L CLPPSVEPRV
Sbjct: 130 RYLDYEVRYVRNFTDIDDKIIARANQLGEDPFNLSKRFSDDFLLDMANLQCLPPSVEPRV 189
Query: 189 SDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRK 248
SDH+ II+MI QILDN AY V GDVYFSVD FP+YG+LSGRKL+DNRAGERV+VD RK
Sbjct: 190 SDHIDEIINMIKQILDNSCAYVVGGDVYFSVDSFPDYGELSGRKLDDNRAGERVSVDERK 249
Query: 249 KNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHH 308
+NPADFALWK+AK+GEP+W+SPWGPGRPGWHIECSAMSA YLGHSFDIHGGG DL+FPHH
Sbjct: 250 RNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPHH 309
Query: 309 ENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIG 368
ENEIAQS AAC +S I+YWIHNGFV ++S+KMSKSLGNF TIR+V+E+YHPLALR+FL+G
Sbjct: 310 ENEIAQSRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEMYHPLALRMFLLG 369
Query: 369 THYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHN 428
THYRSPINY++ QL S+R++Y YQTL DCE+ + + +S+P +T+ I K H
Sbjct: 370 THYRSPINYTIEQLNVTSDRLYYTYQTLLDCEE-ICQQQQSNTGNSLPANTLNYIQKLHE 428
Query: 429 DFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLG 488
+F SMSDDLHT+V LAA+S+PLK +NDLLHTRKGKKQ RLESL+ALE+ IR VL+VLG
Sbjct: 429 EFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQDKRLESLSALEEKIRVVLSVLG 488
Query: 489 LMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIA 548
L+ + Y E L QLR+KAL+RA +TE+ V+Q+IE+RT ARK K+YEKSD IRK+LAA+GIA
Sbjct: 489 LLPSSYHEALQQLRDKALRRASITEELVVQKIEERTAARKAKQYEKSDEIRKELAAIGIA 548
Query: 549 LMDSPVGTTWRPALPLALQEQAVATS 574
LMD P GTTWRP+LP+ L+E VA +
Sbjct: 549 LMDGPDGTTWRPSLPI-LEEAVVAKT 573
>gi|326523811|dbj|BAJ93076.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 573
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/496 (70%), Positives = 413/496 (83%), Gaps = 4/496 (0%)
Query: 78 LYNTMSRKRELVKPKVEG-KVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVC 136
LYNT SR+RE +P+ G +VGMYVCGVTPYD SHIGHAR YV FDVL+RYLR+L YEV
Sbjct: 76 LYNTRSRRREPFRPRAPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLFRYLRYLDYEVR 135
Query: 137 YVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHII 196
YVRNFTD+DDKIIARAN+LGEDP SLS+RY ++F DM L CLPPSVEPRVSDH+ I+
Sbjct: 136 YVRNFTDIDDKIIARANQLGEDPFSLSKRYSDDFLSDMAHLQCLPPSVEPRVSDHIDQIV 195
Query: 197 DMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI QI+DNG AY V GDVYFSVD FPEY +LSGRKL+DNRAGERVAVD RKKNPADFAL
Sbjct: 196 TMIKQIIDNGCAYVVSGDVYFSVDNFPEYRKLSGRKLDDNRAGERVAVDERKKNPADFAL 255
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK+GEP+W+SPWGPGRPGWHIECSAMSA YLG+SFDIHGGG DL+FPHHENEIAQS
Sbjct: 256 WKAAKDGEPWWDSPWGPGRPGWHIECSAMSAQYLGNSFDIHGGGEDLIFPHHENEIAQSR 315
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AAC +S I+YW+HNGFV ++ +KMSKSLGNF TIR+V+ELYHPLALR+FL+GTHYRSPIN
Sbjct: 316 AACCDSSINYWVHNGFVNVNGQKMSKSLGNFITIRKVIELYHPLALRMFLLGTHYRSPIN 375
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
Y+V QL AS+R++Y YQTL D E++ + D ++ DS+P T I K H DF SMSD
Sbjct: 376 YTVEQLNVASDRLYYTYQTLRDSEES-TQQDQSSSGDSLPFTTTHCIEKLHEDFETSMSD 434
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
DLHT+V LAA+S+PLK +NDLLHTRKGKKQ RLESLAALE+ +R VL+VLGLM + Y E
Sbjct: 435 DLHTSVALAAVSEPLKVMNDLLHTRKGKKQEKRLESLAALEEKVRMVLSVLGLMPSSYHE 494
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L QLR KAL+RA +TE+QVLQ+IE+RT ARK K++ +SD IR +LAA+GIALMD P GT
Sbjct: 495 ALQQLRGKALRRACVTEEQVLQKIEERTAARKAKQFGRSDEIRDELAALGIALMDGPDGT 554
Query: 557 TWRPALPLALQEQAVA 572
WRP++P + EQ VA
Sbjct: 555 AWRPSVPSS--EQPVA 568
>gi|145330001|ref|NP_001077986.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|330253409|gb|AEC08503.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 401
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/400 (80%), Positives = 356/400 (89%)
Query: 174 MVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKL 233
M L CL PSV+PRVSDH+P IID+I QILDNG+AY+VDGD+YFSVDKFP YG+LSGRKL
Sbjct: 1 MEQLQCLDPSVQPRVSDHIPQIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKL 60
Query: 234 EDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHS 293
EDNRAGERVAVD+RKK+PADFALWK+AKEGEPFWESPWG GRPGWHIECSAMSAAYLG+S
Sbjct: 61 EDNRAGERVAVDTRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYS 120
Query: 294 FDIHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQV 353
FDIHGGGMDLVFPHHENEIAQSCAAC++S+ISYWIHNGFVT+DSEKMSKSLGNFFTIRQV
Sbjct: 121 FDIHGGGMDLVFPHHENEIAQSCAACDSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQV 180
Query: 354 MELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKD 413
++LYHPLALRLFL+GTHYRSPINYS LESASERIFYIYQTLHDCE AL D+
Sbjct: 181 IDLYHPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENG 240
Query: 414 SIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESL 473
S+P DT+TSIN F +F+ASMSDDL T V LAA+S+PLKTINDL+HTRKGKKQA R ESL
Sbjct: 241 SVPSDTLTSINTFRTEFVASMSDDLLTPVTLAAMSEPLKTINDLIHTRKGKKQARREESL 300
Query: 474 AALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYE 533
ALE TIR+VLT+LGLM T YSEVL QL+EKALKRA L E+ VLQR+++RT ARKNKEYE
Sbjct: 301 KALETTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKNKEYE 360
Query: 534 KSDAIRKDLAAVGIALMDSPVGTTWRPALPLALQEQAVAT 573
+SDAIRKDLA VGIALMDSP GTTWRPA+PLALQE T
Sbjct: 361 RSDAIRKDLAKVGIALMDSPEGTTWRPAIPLALQEPVTTT 400
>gi|359496172|ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|297735988|emb|CBI23962.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/508 (64%), Positives = 396/508 (77%), Gaps = 7/508 (1%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
T+L +YNTM++++E++KP V+GKV MYVCGVT YDLSH+GH R V+FDVLYRYL+HLGY
Sbjct: 5 TELRVYNTMTQQKEILKPVVDGKVSMYVCGVTAYDLSHLGHGRAAVSFDVLYRYLQHLGY 64
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
EV YVRNFTDVDDKII RANELGE+P++LS +C+E+ DM DLHCL P+ +PRVSDHM
Sbjct: 65 EVTYVRNFTDVDDKIIRRANELGENPLTLSSHFCQEYLDDMTDLHCLSPTHQPRVSDHMD 124
Query: 194 HIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPAD 253
I DMITQI++N AY +DGDVYF+VDK P YG+LSGRKLE+NRAGERVAVDSRK+NPAD
Sbjct: 125 QIKDMITQIINNDCAYTIDGDVYFAVDKSPNYGRLSGRKLENNRAGERVAVDSRKRNPAD 184
Query: 254 FALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIA 313
FALWK+AK GEP W+SPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIA
Sbjct: 185 FALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFPHHENEIA 244
Query: 314 QSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
QSCAAC S++SYW+HNG VT ++EKMSKSLGNFFTIRQ+ +LYHPLALR FL+GTHYRS
Sbjct: 245 QSCAACQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDLYHPLALRYFLLGTHYRS 304
Query: 374 PINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKD-SIPPDTVTSINKFHNDFLA 432
P+NYS+ QLE ASE +FYIYQTL DCE LSL ++ I P I DF
Sbjct: 305 PVNYSIAQLEIASEAVFYIYQTLRDCEDTLSLFQEVNGRNVCIAPAAQDCIRTLQTDFQT 364
Query: 433 SMSDDLHTTVVL-AALSDPLKTINDLLHTRKGKKQAMR----LESLAALEKTIRNVLTVL 487
MSDDL T +L A+L + L+ IN L+ K K+Q + +ESL L K ++ VL+VL
Sbjct: 365 KMSDDLSTPHILNASLQEALRFINSCLNMLKKKQQKQQQLSAVESLTKLGKEVKGVLSVL 424
Query: 488 GLMST-GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVG 546
GL+ST YSEVL QL+ KALKRA + ED VL IE+R +ARKNK++ K D IR DLA+ G
Sbjct: 425 GLLSTLAYSEVLQQLKGKALKRAGMIEDDVLHLIEERALARKNKDFSKGDQIRADLASKG 484
Query: 547 IALMDSPVGTTWRPALPLALQEQAVATS 574
IALMD T WRP +P+ + QA A+S
Sbjct: 485 IALMDVGKETIWRPCVPVQQEPQAPASS 512
>gi|359475690|ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|296087508|emb|CBI34097.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/511 (64%), Positives = 396/511 (77%), Gaps = 7/511 (1%)
Query: 71 SASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRH 130
+ +T+L +YNTM++++E+ KP V+GKV MYVCGVT YDLSH+GHAR V FDVLYRYL+H
Sbjct: 2 AETTELRVYNTMTQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRYLQH 61
Query: 131 LGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSD 190
LGYEV YVRNFTDVDDKII RANELGE+P++LS R+C+E+ DM DL CL P+ +PRVSD
Sbjct: 62 LGYEVTYVRNFTDVDDKIIRRANELGENPLTLSSRFCQEYLDDMTDLQCLTPTQQPRVSD 121
Query: 191 HMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKN 250
HM I DMITQI++N AY +DGDVYF+VDK P YG+LSGRKLEDNRAGERVAVDSRK+N
Sbjct: 122 HMDQIKDMITQIINNDCAYIIDGDVYFAVDKSPNYGRLSGRKLEDNRAGERVAVDSRKRN 181
Query: 251 PADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHEN 310
PADFALWK+AK EP W+SPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHEN
Sbjct: 182 PADFALWKAAKPDEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFPHHEN 241
Query: 311 EIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTH 370
EIAQSCAAC S++SYW+HNG VT ++EKMSKSLGNFFTIRQ+ +LYHPLALR FL+GTH
Sbjct: 242 EIAQSCAACQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDLYHPLALRYFLLGTH 301
Query: 371 YRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKD-SIPPDTVTSINKFHND 429
YRSP+NYS+ QLE ASE +FYIYQTL DCE LS ++ I P I+K D
Sbjct: 302 YRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSPFQEVNGQNVCITPAAKDCISKLQTD 361
Query: 430 FLASMSDDLHTTVVL-AALSDPLKTINDLLHTRKGKKQAMR----LESLAALEKTIRNVL 484
F MSDDL T +L A+L + L+ IN L+ K K+Q + ++SL LEK ++ VL
Sbjct: 362 FQTKMSDDLSTPHILNASLQEALRFINSGLNMLKKKQQKQQQLSAVQSLTELEKEVKGVL 421
Query: 485 TVLGLMST-GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLA 543
+VLGL+ST YSEVL QL+ KAL+RA + ED VL IE+R +ARKNK + + D IR DLA
Sbjct: 422 SVLGLLSTLAYSEVLQQLKGKALRRAGMIEDDVLHLIEERALARKNKNFSRGDQIRADLA 481
Query: 544 AVGIALMDSPVGTTWRPALPLALQEQAVATS 574
+ GIALMD T WRP +P+ + QA A S
Sbjct: 482 SKGIALMDVGKETIWRPCVPVEQEPQAPAAS 512
>gi|255585350|ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223526794|gb|EEF29017.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 530
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/511 (62%), Positives = 383/511 (74%), Gaps = 16/511 (3%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNTM+R+ E KP V GKVGMYVCGVT Y SHIGHAR V FDVL+RYL+HLGYEV Y
Sbjct: 9 LYNTMNRQLEAFKPHVPGKVGMYVCGVTAYAFSHIGHARAAVIFDVLFRYLQHLGYEVTY 68
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
RNFTD+DDKII RANE GEDP SLS R+CEE+ DM L CL P+ +PRV+DH+ I D
Sbjct: 69 ARNFTDIDDKIIKRANESGEDPFSLSSRFCEEYLVDMDSLQCLRPTHQPRVTDHIEQIKD 128
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
MITQI++NGFAY +GDV+F+VDKFP YGQLSG+KLE++RAGER D+RK+NPADFALW
Sbjct: 129 MITQIINNGFAYPSEGDVFFAVDKFPNYGQLSGQKLENHRAGERNP-DTRKRNPADFALW 187
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK GEP WESPWGPGRPGWHIECSAMSA YL FDIHGGG DL+FPHHENEI QS A
Sbjct: 188 KAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGSDLIFPHHENEITQSAA 247
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
AC S++SYWIHNG VT ++EKMSKSLGN+FTIR+V E YHPLA+R FLI HYRSP+NY
Sbjct: 248 ACQESNVSYWIHNGHVTNNNEKMSKSLGNYFTIREVTERYHPLAVRHFLISAHYRSPLNY 307
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKD---------SIPPDTVTSINKFHN 428
+V QLESAS+ IFYIYQTL DCE ALS+ +LK+ I D INK +
Sbjct: 308 TVFQLESASDAIFYIYQTLQDCEDALSMFQDGSLKEGAAQNSKVVGITADAKKCINKLRD 367
Query: 429 DFLASMSDDLHTTVVL-AALSDPLKTINDLLHTRKGK----KQAMRLESLAALEKTIRNV 483
+F MSDDL T+ +L A D LK IN + K K +Q ++SL +E+ I+ V
Sbjct: 368 EFETKMSDDLSTSHILTGAFQDALKFINSSISMLKKKLQKPQQLSLIQSLTEIEREIKLV 427
Query: 484 LTVLGLMSTG-YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDL 542
L +LGL+ G Y+E+L QL++KALKRA +TED VL+ IE+R ARKNKE+ +SD +R +L
Sbjct: 428 LNILGLLPPGTYAEILQQLKDKALKRAGVTEDDVLRSIEERAQARKNKEFSRSDQVRANL 487
Query: 543 AAVGIALMDSPVGTTWRPALPLALQEQAVAT 573
AA GIALMD T WRP +P+ +++AV+
Sbjct: 488 AAKGIALMDVGKETVWRPCVPVEQEQEAVSV 518
>gi|168067577|ref|XP_001785689.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662678|gb|EDQ49502.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 491
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/489 (62%), Positives = 377/489 (77%), Gaps = 1/489 (0%)
Query: 82 MSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNF 141
M +++E+ +P V GKV MYVCGVT YD SHIGHARVYV FDVL+RYL+ +GY+V YVRNF
Sbjct: 1 MKKQKEVFQPIVPGKVSMYVCGVTTYDYSHIGHARVYVAFDVLFRYLKSVGYDVTYVRNF 60
Query: 142 TDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQ 201
TD+DDKII RANE+GEDP++LSRR+C+EF DM L CLPP+VEPRVSDH+P II MI+Q
Sbjct: 61 TDIDDKIIKRANEVGEDPLNLSRRFCDEFQVDMELLRCLPPNVEPRVSDHIPQIIKMISQ 120
Query: 202 ILDNGFAYRVDG-DVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSA 260
I++N Y ++G DVYF VD P YG LSGRK E+NRAGERV VD+RK+NPADFALWKSA
Sbjct: 121 IIENKNGYVMEGGDVYFEVDTLPTYGCLSGRKQEENRAGERVLVDNRKRNPADFALWKSA 180
Query: 261 KEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACN 320
K GEP W+SPWGPGRPGWHIECSAMSA +LGH FDIHGGGMDL+FPHHENEIAQSCAAC
Sbjct: 181 KPGEPAWDSPWGPGRPGWHIECSAMSAEHLGHKFDIHGGGMDLIFPHHENEIAQSCAACA 240
Query: 321 NSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYSVV 380
+S + YW+HNGFVT+D+EKMSKS+GNFFTIR+V+ELYHPLALR FL+GTHYR+P+NYS
Sbjct: 241 DSRVGYWLHNGFVTVDNEKMSKSVGNFFTIREVLELYHPLALRWFLLGTHYRAPVNYSKR 300
Query: 381 QLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDDLHT 440
QLE AS+R+FYI+QTL DCE+ LS + + + + N F SM+DDL+T
Sbjct: 301 QLEVASDRVFYIFQTLVDCEQILSQQVDKVAACNPSKEAIELVKSIKNTFRTSMADDLNT 360
Query: 441 TVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEVLLQ 500
VV+A+ S+ K +NDL+HTRKG+K RL SL L I+ V+ VLG YS+VL +
Sbjct: 361 PVVVASFSESFKFMNDLMHTRKGRKDKTRLVSLQLLITEIQEVMNVLGFQIPSYSKVLDE 420
Query: 501 LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRP 560
+R ALKRA ++ + + R+++R AR+ K+Y +SD IR +LAA GI LMD GT WRP
Sbjct: 421 IRALALKRAGMSMNDLAARLQERASAREAKDYARSDQIRLELAAAGIGLMDGGDGTLWRP 480
Query: 561 ALPLALQEQ 569
+ Q Q
Sbjct: 481 IVVAEEQLQ 489
>gi|449464950|ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
gi|449508099|ref|XP_004163218.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 562
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/508 (61%), Positives = 382/508 (75%), Gaps = 15/508 (2%)
Query: 72 ASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHL 131
A + +YN+M++++E+ K GKVGMYVCG+T YD SHIGHAR V FDVLYRYL+HL
Sbjct: 2 AKEEFRVYNSMTQQKEVFTTKEPGKVGMYVCGITAYDFSHIGHARAAVNFDVLYRYLKHL 61
Query: 132 GYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDH 191
GYEV YVRNFTDVDDKII RANE GE+P +LS R+C+E+ DM DL CL P+ +PRVSDH
Sbjct: 62 GYEVTYVRNFTDVDDKIIRRANESGENPFALSDRFCQEYLSDMADLQCLSPTHQPRVSDH 121
Query: 192 MPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNP 251
+ I DMITQI+ NG+ Y VDGDV+FSVDKFP YGQLSG+KLE++RAGERVAVDSRK NP
Sbjct: 122 LEQIKDMITQIIKNGYGYAVDGDVFFSVDKFPNYGQLSGQKLENHRAGERVAVDSRKNNP 181
Query: 252 ADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
ADFALWK+AK GEP WESPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENE
Sbjct: 182 ADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFPHHENE 241
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
+AQSCAAC S ISYW+HNG VT ++EKMSKSLGNFFTIRQ+ E YHPL LR FLI HY
Sbjct: 242 VAQSCAACQESKISYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLVLRHFLISAHY 301
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSI----PPDTVTS----- 422
RSP+NY+V QL+SAS+ ++YIYQT+ DCE ALS L D + D V+S
Sbjct: 302 RSPLNYTVSQLDSASDTVYYIYQTMQDCEDALSQHQGENLSDGLGKTGKKDPVSSAAEEC 361
Query: 423 INKFHNDFLASMSDDLHTTVVL-AALSDPLKTINDLLHTRKGKKQAMR----LESLAALE 477
I ++F M+DDL+T +L A + LK IN L + K K+ + ++SL ++
Sbjct: 362 IINLRSEFQTRMADDLNTAHILTGAFQEALKFINSTLTSLKKKQPKKQQLSMIQSLVNVK 421
Query: 478 KTIRNVLTVLGLMSTG-YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSD 536
K +R VL VLGL+ST YSEVL QL++KALKRA + ED +L IE+RT ARK+K + KSD
Sbjct: 422 KELREVLDVLGLLSTSTYSEVLQQLKDKALKRAGMVEDDILHLIEERTQARKDKNFGKSD 481
Query: 537 AIRKDLAAVGIALMDSPVGTTWRPALPL 564
IR L+++GIALMD T WRP +P+
Sbjct: 482 NIRAKLSSLGIALMDVGRETIWRPCVPV 509
>gi|224111652|ref|XP_002315932.1| predicted protein [Populus trichocarpa]
gi|222864972|gb|EEF02103.1| predicted protein [Populus trichocarpa]
Length = 532
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/511 (61%), Positives = 389/511 (76%), Gaps = 15/511 (2%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
+L LYN+M++++E+ K ++ GKV MYVCGVT YD SH+GHAR V FD+L+RYL+HLGYE
Sbjct: 6 ELKLYNSMTQQKEVFKSRIPGKVSMYVCGVTSYDFSHLGHARAAVAFDILFRYLQHLGYE 65
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V YVRNFTD+DDKII RANE+GEDP+SLS R+CEE+ DM DL CL P+ +PRV+DH+
Sbjct: 66 VTYVRNFTDIDDKIIRRANEIGEDPLSLSSRFCEEYLVDMTDLQCLIPTHQPRVTDHVEQ 125
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I DMITQI++ AY V+GDV+F+V+K P YGQLSG++LE+NRAGERVAVDSRK+NPADF
Sbjct: 126 IKDMITQIIEKDCAYAVEGDVFFAVNKSPNYGQLSGQRLENNRAGERVAVDSRKRNPADF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK GEP WESPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQ
Sbjct: 186 ALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGIDLIFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SCAAC S +SYW+HNG VT ++EKMSKSLGNFFTIRQ+ E YHPLALR FLI HYRSP
Sbjct: 246 SCAACEESSVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKD---------SIPPDTVTSINK 425
+NYSV QLES+S+ +FYIYQTL DCE AL +LK+ +I D I++
Sbjct: 306 LNYSVSQLESSSDAVFYIYQTLQDCEDALLPFQEGSLKEGAGQNANLVAITADAQKCISR 365
Query: 426 FHNDFLASMSDDLHTTVVL-AALSDPLKTIN---DLLHTRKGKKQAMRL-ESLAALEKTI 480
H DF MSDDL+T+ +L A + LK +N +L ++ KKQ + L S+ ++K +
Sbjct: 366 LHEDFETKMSDDLNTSPLLTGAFQEALKVVNGSLGMLKKKQQKKQQLSLIRSVTEVKKEV 425
Query: 481 RNVLTVLGLM-STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIR 539
VL +LGL +EVL QL+ KALKRA LTED V+ IEDR VARK+++++KSD IR
Sbjct: 426 TEVLRILGLFPPCTCAEVLQQLKGKALKRAGLTEDDVMSLIEDRAVARKSQDFKKSDQIR 485
Query: 540 KDLAAVGIALMDSPVGTTWRPALPLALQEQA 570
DL+A GIALMD T WRP +P+ +E+A
Sbjct: 486 TDLSARGIALMDVGKETVWRPCVPVENEEKA 516
>gi|356536300|ref|XP_003536677.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 548
Score = 636 bits (1640), Expect = e-180, Method: Compositional matrix adjust.
Identities = 308/505 (60%), Positives = 384/505 (76%), Gaps = 11/505 (2%)
Query: 70 ASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLR 129
A + +YN+M++++E+ K KV GKV MYVCGVT YD SH+GHAR V+FD+L+RYL+
Sbjct: 2 AEEQGEFRIYNSMTQQKEIFKTKVPGKVSMYVCGVTAYDFSHLGHARAAVSFDILFRYLK 61
Query: 130 HLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVS 189
HLGYE+ YVRNFTDVDDKII RANE GEDP+ LS R+C+E++ DM DL C PS EPRVS
Sbjct: 62 HLGYEITYVRNFTDVDDKIIKRANETGEDPLMLSNRFCDEYNADMADLQCETPSREPRVS 121
Query: 190 DHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKK 249
+H+ I DMITQI++NG+AY VDGDV+++VDK P YG LSG++LE NRAGERVAVDSRK+
Sbjct: 122 EHLNEIKDMITQIINNGYAYEVDGDVFYAVDKCPNYGMLSGQRLEHNRAGERVAVDSRKR 181
Query: 250 NPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHE 309
+PADFALWK+AK GEP W+SPWGPGRPGWHIECSAMSA YL H FDIHGGG+DL+FPHHE
Sbjct: 182 HPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYLTHKFDIHGGGIDLIFPHHE 241
Query: 310 NEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGT 369
NEIAQS AA ++SH+SYW+HNG VT ++EKMSKSLGNFFTIRQ+ E YH LALR FLI
Sbjct: 242 NEIAQSWAADHDSHVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHSLALRHFLISA 301
Query: 370 HYRSPINYSVVQLESASERIFYIYQTLHDCEKALS-LLDAAALKDSIPPDTVTS----IN 424
HYRSP+NYS+ QLE++S+ I+YI+QTL DC+ A+S LL K+ P + I
Sbjct: 302 HYRSPLNYSISQLENSSDAIYYIFQTLQDCKDAVSPLLQGETEKNEKVPQINEAAKECIK 361
Query: 425 KFHNDFLASMSDDLHTTVVL-AALSDPLKTIN----DLLHTRKGKKQAMRLESLAALEKT 479
K + +F MSDDL T V+L AL + LK +N L + + Q ++SL +EK
Sbjct: 362 KLNVEFQTKMSDDLQTPVILTGALQEALKFVNTSLKMLKKKMQKRAQLQLIQSLLEVEKV 421
Query: 480 IRNVLTVLGLMST-GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAI 538
+ VL VLGL+S+ Y+EVL QL++KALKRA LTED+VL I++RT AR NK++ KSD +
Sbjct: 422 VGKVLDVLGLLSSKSYAEVLQQLKDKALKRAGLTEDEVLHLIDERTQARINKDFAKSDKM 481
Query: 539 RKDLAAVGIALMDSPVGTTWRPALP 563
R DLA GIALMD TWRP +P
Sbjct: 482 RADLATKGIALMDVGNEITWRPCIP 506
>gi|356575566|ref|XP_003555910.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 553
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 308/505 (60%), Positives = 380/505 (75%), Gaps = 11/505 (2%)
Query: 70 ASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLR 129
A + +YN+MS+++E+ K KV GKV MYVCGVT YD SH+GHAR V+FD+L+RYL+
Sbjct: 2 AEEQAEFRIYNSMSQQKEIFKTKVPGKVSMYVCGVTAYDFSHLGHARAAVSFDILFRYLK 61
Query: 130 HLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVS 189
HL YE+ YVRNFTDVDDKII RANE GEDP+ LS R+C+E++ DM DL C PS EPRVS
Sbjct: 62 HLDYEITYVRNFTDVDDKIIKRANETGEDPLMLSNRFCDEYNADMADLQCKTPSKEPRVS 121
Query: 190 DHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKK 249
+H+ I DMITQI+ NG+AY VDGDV+++VDK P YG LSG++LE NRAGERVAVDSRK+
Sbjct: 122 EHLNEIKDMITQIISNGYAYEVDGDVFYAVDKCPNYGMLSGQRLEHNRAGERVAVDSRKR 181
Query: 250 NPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHE 309
+PADFALWK+AK GEP W+SPWGPGRPGWHIECSAMSA YL H FDIHGGG+DL+FPHHE
Sbjct: 182 HPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYLTHKFDIHGGGIDLIFPHHE 241
Query: 310 NEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGT 369
NEIAQS AA + SH+SYW+HNG VT ++EKMSKSLGNFFTIRQ+ E YHPLALR FLI
Sbjct: 242 NEIAQSWAADHESHVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 301
Query: 370 HYRSPINYSVVQLESASERIFYIYQTLHDCEKALS-LLDAAALKDSIPPDTVTS----IN 424
HYRSP+NYS+ QLE++S+ I+YI+QTL DC+ A+S LL K+ P + I
Sbjct: 302 HYRSPLNYSISQLENSSDAIYYIFQTLQDCKDAVSPLLQGETEKNEKVPQINEAAKECIK 361
Query: 425 KFHNDFLASMSDDLHTTVVL-AALSDPLKTIN----DLLHTRKGKKQAMRLESLAALEKT 479
K + +F MSDDL T V+L AL + LK +N L + + Q ++SL +EK
Sbjct: 362 KLNVEFQTKMSDDLQTPVILTGALQEALKFVNTSLKMLKKKMQKRAQLQLIQSLLEVEKE 421
Query: 480 IRNVLTVLGLMST-GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAI 538
+ VL VLGL+S+ Y+EVL QL++KAL RA LTED+VL IE+RT AR NK++ KSD +
Sbjct: 422 VGKVLDVLGLLSSKSYAEVLHQLKDKALNRAGLTEDEVLHLIEERTQARINKDFAKSDKM 481
Query: 539 RKDLAAVGIALMDSPVGTTWRPALP 563
R DLA GIALMD WRP +P
Sbjct: 482 RADLATKGIALMDVGNEIIWRPCIP 506
>gi|357444709|ref|XP_003592632.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
gi|355481680|gb|AES62883.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
Length = 552
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 314/513 (61%), Positives = 384/513 (74%), Gaps = 12/513 (2%)
Query: 73 STQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLG 132
S +L LYN+M+ ++E+ PKV GKV MYVCGVT YDLSH+GHAR V+FD+L+RYL+HL
Sbjct: 13 SVELKLYNSMNNEKEIFNPKVAGKVSMYVCGVTAYDLSHLGHARAAVSFDILFRYLKHLD 72
Query: 133 YEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHM 192
YEV YVRNFTDVDDKII RANE G DP LSR +C+E++ DM DL C P+ EPRVSDH+
Sbjct: 73 YEVTYVRNFTDVDDKIINRANEKGVDPFELSRHFCDEYNVDMSDLLCERPTKEPRVSDHI 132
Query: 193 PHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
I DMITQI++N +AY V+GDV++SV+K P YG LSG++LE NRAGERVAVDSRK +PA
Sbjct: 133 DQIKDMITQIINNDYAYEVNGDVFYSVEKCPNYGALSGQRLEHNRAGERVAVDSRKHHPA 192
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DFALWK+AK GEP W+SPWGPGRPGWHIECSAMSA YL H FDIHGGG+DL+FPHHENEI
Sbjct: 193 DFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYLSHKFDIHGGGIDLIFPHHENEI 252
Query: 313 AQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
AQS AA SHISYW+HNG VT ++EKMSKSLGNFFTIRQ+ E YHPLALR FLI HYR
Sbjct: 253 AQSWAADKESHISYWLHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 312
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALS--LLDAAALKDSIPPDTVTS---INKFH 427
SP+NYS+ QLE++S+ I+YI+QTL DC LS L + K+ +PP + I K
Sbjct: 313 SPLNYSITQLETSSDAIYYIFQTLEDCRDTLSSFLQEDTEKKEKVPPINDAAKECIKKLK 372
Query: 428 NDFLASMSDDLHTTVVL-AALSDPLKTIN----DLLHTRKGKKQAMRLESLAALEKTIRN 482
++F MSDDL T V+L AL + LK +N L + + Q ++SL +EK R
Sbjct: 373 DEFQTKMSDDLQTPVILTGALQEALKFMNGSLKMLKKKMQKRAQLQLVQSLLEVEKEARE 432
Query: 483 VLTVLGLMST-GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKD 541
+L VLGL+S+ Y+EVL QL++KALKRA LTE +VL+ IE+R AR NK++ KSD +R D
Sbjct: 433 ILKVLGLLSSLSYAEVLQQLKDKALKRAGLTEVEVLKSIEERRQARINKDFAKSDNVRTD 492
Query: 542 LAAVGIALMDSPVGTTWRPALPLA-LQEQAVAT 573
L A GIALMD T WRP +P L QAV+T
Sbjct: 493 LTAKGIALMDVGNETIWRPCIPSEPLVAQAVST 525
>gi|108706130|gb|ABF93925.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|108706131|gb|ABF93926.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|218192068|gb|EEC74495.1| hypothetical protein OsI_09969 [Oryza sativa Indica Group]
gi|222624173|gb|EEE58305.1| hypothetical protein OsJ_09367 [Oryza sativa Japonica Group]
Length = 528
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 305/521 (58%), Positives = 378/521 (72%), Gaps = 27/521 (5%)
Query: 70 ASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLR 129
A + QL L+N+M++K+EL +P VEGKV MYVCGVTPYD SHIGHAR YV FDVLYRYL+
Sbjct: 5 AKPTPQLELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLK 64
Query: 130 HLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVS 189
LGYEV YVRNFTD+DDKII RANE GE SLS R+ EF DM L CLPP+ EPRV+
Sbjct: 65 FLGYEVEYVRNFTDIDDKIIKRANEAGETVTSLSSRFINEFLLDMAQLQCLPPTCEPRVT 124
Query: 190 DHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKK 249
DH+ HII++IT+I++NG AY ++GDVYFSVD FPEY LSGRKL+ N AG RVAVD+RK+
Sbjct: 125 DHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKLDHNLAGSRVAVDTRKR 184
Query: 250 NPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHE 309
NPADFALWK+AKEGEPFW+SPWG GRPGWHIECSAMSA YLGH FDIHGGG DL+FPHHE
Sbjct: 185 NPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHE 244
Query: 310 NEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGT 369
NE+AQS AA S + W+HNGFV D +KMSKS NFFTIR +++LYHP+ALR FL+ T
Sbjct: 245 NELAQSRAAYPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDIIDLYHPMALRFFLMRT 304
Query: 370 HYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHND 429
HYR +N+S LE AS+R++YIYQTL+DCE+ LS + +P + +NK H++
Sbjct: 305 HYRGDVNHSDKALEIASDRVYYIYQTLYDCEEVLSQYRGENISVPVPVEEQDMVNKHHSE 364
Query: 430 FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMR-------------------- 469
FL SM+DDL TT VL +D LK IN L+ K +Q +
Sbjct: 365 FLESMADDLRTTDVLDGFTDLLKAINSNLNDFKKLQQKLEQQKKKQQQQKQQKQKQQQAQ 424
Query: 470 ------LESLAALEKTIRNVLTVLGLM-STGYSEVLLQLREKALKRADLTEDQVLQRIED 522
++++ ALE I+N +++LGLM + +E L QL++KALKRA LTE+ + ++IE
Sbjct: 425 KQPEEYIQAMFALETEIKNKISILGLMPPSSLAEALKQLKDKALKRAGLTEELLQEQIEQ 484
Query: 523 RTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPALP 563
RT ARKNK+++ SD IRK L + GIALMD P GT WRP P
Sbjct: 485 RTAARKNKQFDVSDQIRKQLGSKGIALMDEPTGTVWRPCEP 525
>gi|218184692|gb|EEC67119.1| hypothetical protein OsI_33924 [Oryza sativa Indica Group]
Length = 523
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 300/516 (58%), Positives = 387/516 (75%), Gaps = 16/516 (3%)
Query: 61 GKTDGDDKPASA--STQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVY 118
G++ G+++P + +L L++T ++ +P+VEGKV MYVCGVTPYD SH+GHAR Y
Sbjct: 5 GRSVGEEEPRGKRPAAELRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAY 64
Query: 119 VTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLH 178
V FDVL+RYL++LGYEV YVRNFTD+DDKII RANE GED +SLS R+ +EFH+DM +L
Sbjct: 65 VAFDVLFRYLKYLGYEVNYVRNFTDIDDKIIKRANEAGEDALSLSSRFIDEFHRDMYELQ 124
Query: 179 CLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRA 238
CLPP+ EPRV+ H+ IID+IT+I+DNG AY ++GDVYFSVD FP+Y LSGRK++ NR
Sbjct: 125 CLPPTHEPRVTKHIEQIIDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRP 184
Query: 239 GERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHG 298
G RVAVD+RK+NPADFALWKSAKEGEP WESPWG GRPGWHIECSAMSA YLG+ FDIHG
Sbjct: 185 GTRVAVDARKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHG 244
Query: 299 GGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYH 358
GG DL+FPHHENE+AQS AA S + W+HNGFV D +KM+K+ NFFTIR ++ LYH
Sbjct: 245 GGKDLIFPHHENELAQSQAAYPESEVKCWMHNGFVNKDGQKMAKADKNFFTIRDIISLYH 304
Query: 359 PLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPD 418
P+ALRLFL+ THYRS +N+S L+ AS R++YIYQTLHD E+ +SL L++SIP D
Sbjct: 305 PMALRLFLMRTHYRSDVNHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPAD 364
Query: 419 TVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMR--------- 469
I + H++FL MSDDLHTT AAL +K L H +K + Q +
Sbjct: 365 DQKLIEENHSNFLEKMSDDLHTT---AALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPED 421
Query: 470 -LESLAALEKTIRNVLTVLGLMS-TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVAR 527
+++L AL+ + + L++LGLM + +E L QL++KALKRA +T +Q+ Q IE RT+AR
Sbjct: 422 YIQALVALQNEVTDKLSILGLMPMSSLAEALKQLKDKALKRAGMTAEQLQQMIEQRTLAR 481
Query: 528 KNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPALP 563
KNK++ +SD IR +L+A+GIALMD P GT WRP+ P
Sbjct: 482 KNKDFAESDRIRTELSALGIALMDEPTGTLWRPSEP 517
>gi|357114089|ref|XP_003558833.1| PREDICTED: cysteinyl-tRNA synthetase-like isoform 1 [Brachypodium
distachyon]
Length = 562
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 306/524 (58%), Positives = 375/524 (71%), Gaps = 27/524 (5%)
Query: 63 TDGDDKPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFD 122
T G+DKP + QL L+N+M++K+E P+VEGKVGMYVCGVTPYD SHIGHAR YV FD
Sbjct: 36 TTGEDKPKPSPPQLHLFNSMTKKKEPFVPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFD 95
Query: 123 VLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPP 182
VLYRYL+ LGYEV YVRNFTD+DDKII RAN+ GE SLS R+ EF DM L CLPP
Sbjct: 96 VLYRYLKFLGYEVEYVRNFTDIDDKIIDRANKAGETVTSLSTRFINEFLIDMAKLQCLPP 155
Query: 183 SVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERV 242
+ EPRV++H+ HIID+I +I+ N AY VDGDV+FS+D FPEY LSGR L+DNR G RV
Sbjct: 156 TCEPRVTEHIEHIIDLIAEIIKNDKAY-VDGDVFFSIDSFPEYNSLSGRNLDDNRPGSRV 214
Query: 243 AVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMD 302
AVD RK+N DFALWK+AKEGEPFWESPWG GRPGWHIECSAMSA YLGH FDIHGGG D
Sbjct: 215 AVDPRKRNRNDFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKD 274
Query: 303 LVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLAL 362
L+FPHHENE+AQS AA +S + W+HNGFV D EKMSKSL NFF+IR+++ LYHPLAL
Sbjct: 275 LIFPHHENELAQSRAAYPDSEVKCWMHNGFVNKDDEKMSKSLNNFFSIREIITLYHPLAL 334
Query: 363 RLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTS 422
R FL+ THY+S +N+S LE AS+R++YIYQTLHDC++ LSL + +P +
Sbjct: 335 RFFLMRTHYKSDVNHSDKALEIASDRVYYIYQTLHDCDEVLSLYREENISVPVPDEEQKL 394
Query: 423 INKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAM-------------- 468
+++ H FL SMSDDL TT VL LK IN L+ K +Q +
Sbjct: 395 VDEHHTAFLDSMSDDLRTTDVLDGFMGLLKAINSNLNDFKKLQQKLEQQKKKQQQKKQQQ 454
Query: 469 -----------RLESLAALEKTIRNVLTVLGLM-STGYSEVLLQLREKALKRADLTEDQV 516
+++L +LE I+N L++LGLM + EVL +L+EKALKRA LTE+ +
Sbjct: 455 KQQRPQKQPEDHIQALISLEAEIKNKLSILGLMPPSSLVEVLKELKEKALKRAGLTEETL 514
Query: 517 LQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRP 560
++IE R AR NK+++ SD IRK LA+ GIALMD P GT WRP
Sbjct: 515 REQIEQRVAARNNKQFDVSDQIRKQLASKGIALMDEPTGTVWRP 558
>gi|226531133|ref|NP_001146887.1| LOC100280495 [Zea mays]
gi|195604736|gb|ACG24198.1| cysteinyl-tRNA synthetase [Zea mays]
gi|413945620|gb|AFW78269.1| cysteinyl-tRNA synthetase [Zea mays]
Length = 556
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 302/522 (57%), Positives = 380/522 (72%), Gaps = 28/522 (5%)
Query: 70 ASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLR 129
A+A QL L+N+++++ E +P+VEGKVGMYVCGVTPYD SHIGHAR YV FDVLYRYL+
Sbjct: 27 ATALPQLVLFNSLTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFDVLYRYLK 86
Query: 130 HLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVS 189
LGYEV YVRNFTD+DDKII RANE GE SLS R+ EF DM +L CLPP+ EPRV+
Sbjct: 87 FLGYEVEYVRNFTDIDDKIIKRANERGETVTSLSSRFINEFLLDMTELQCLPPTCEPRVT 146
Query: 190 DHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKK 249
+H+ HII++IT+I++N AY ++GDVYFSV+ FPEY LSGRK + N+AG RVA D+RK+
Sbjct: 147 EHIEHIIELITKIMENDKAYAMEGDVYFSVESFPEYLSLSGRKFDQNQAGARVAFDTRKR 206
Query: 250 NPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHE 309
NPADFALWK+AKEGEPFW+SPWG GRPGWHIECSAMSA YLGH FDIHGGG DL+FPHHE
Sbjct: 207 NPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHLFDIHGGGKDLIFPHHE 266
Query: 310 NEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGT 369
NE+AQS AA S + W+HNGFV D +KM+KS NFFTIR + LYHPLALR FL+ T
Sbjct: 267 NELAQSRAAYPESEVKCWMHNGFVNKDDKKMAKSDNNFFTIRDITALYHPLALRFFLMRT 326
Query: 370 HYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHND 429
HYRS +N+S LE AS+R++YI+QTL+DCE+ L+ + S+P + I+K H++
Sbjct: 327 HYRSDVNHSDQALEIASDRVYYIFQTLYDCEEVLATYREEGISLSVPFEEQNLIDKHHSE 386
Query: 430 FLASMSDDLHTTVVL-AALSDPLKTINDLLHTRKGKKQAMR------------------- 469
FL MS+DL TT VL + LK IN L+ K +Q +
Sbjct: 387 FLKYMSNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQQQQKKQQQKQQQL 446
Query: 470 -------LESLAALEKTIRNVLTVLGLM-STGYSEVLLQLREKALKRADLTEDQVLQRIE 521
+++L ALE ++N L++LGLM S+ +EVL QL++KALKRA LTE+++ ++IE
Sbjct: 447 QKQPEHYIQALIALEIELKNKLSILGLMPSSSLAEVLKQLKDKALKRAGLTEEKLQEQIE 506
Query: 522 DRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPALP 563
R VARKNK++E SD IRK+LA GIALMD P GT WRP P
Sbjct: 507 QRNVARKNKQFEISDGIRKNLATKGIALMDEPSGTVWRPCEP 548
>gi|297610616|ref|NP_001064785.2| Os10g0463100 [Oryza sativa Japonica Group]
gi|22758318|gb|AAN05522.1| putative cysteinyl-tRNA synthetase [Oryza sativa Japonica Group]
gi|255679472|dbj|BAF26699.2| Os10g0463100 [Oryza sativa Japonica Group]
Length = 520
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 297/515 (57%), Positives = 383/515 (74%), Gaps = 17/515 (3%)
Query: 61 GKTDGDDKPASA--STQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVY 118
G++ G+++P + +L L++T ++ +P+VEGKV MYVCGVTPYD SH+GHAR Y
Sbjct: 5 GRSVGEEEPRGKRPAAELRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAY 64
Query: 119 VTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLH 178
V FDVL+RYL++LGYEV YVRNFTD+DDKII RANE GED +SLS R+ +EFH+DM +L
Sbjct: 65 VAFDVLFRYLKYLGYEVNYVRNFTDIDDKIIKRANEAGEDALSLSSRFIDEFHRDMYELQ 124
Query: 179 CLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRA 238
CLPP+ EPRV+ H+ IID+IT+I+DNG AY ++GDVYFSVD FP+Y LSGRK++ NR
Sbjct: 125 CLPPTHEPRVTKHIEQIIDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRP 184
Query: 239 GERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHG 298
G RVAVD+RK+NPADFALWKSAKEGEP WESPWG GRPGWHIECSAMSA YLG+ FDIHG
Sbjct: 185 GTRVAVDARKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHG 244
Query: 299 GGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYH 358
GG DL+FPHHENE+AQS AA S + W+HNGFV D +KM+K+ NFFTIR ++ LYH
Sbjct: 245 GGKDLIFPHHENELAQSQAAYPESEVKCWMHNGFVNKDGQKMAKADKNFFTIRDIISLYH 304
Query: 359 PLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPD 418
P+ALRLFL+ THYRS +N+S L+ AS R++YIYQTLHD E+ +SL L++SIP D
Sbjct: 305 PMALRLFLMRTHYRSDVNHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPAD 364
Query: 419 TVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMR--------- 469
I + ++FL MSDDLHTT AAL +K L H +K + Q +
Sbjct: 365 DQKLIEENRSNFLEKMSDDLHTT---AALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPED 421
Query: 470 -LESLAALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARK 528
+++L AL+ + + L++LGLM S + QL++KALKRA +T +Q+ Q IE RT+ARK
Sbjct: 422 YIQALVALQNEVTDKLSILGLMPM--SSLAEQLKDKALKRAGMTAEQLQQMIEQRTLARK 479
Query: 529 NKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPALP 563
NK++ +SD IR +L+A+GIALM P GT WRP+ P
Sbjct: 480 NKDFAESDRIRTELSALGIALMGEPTGTLWRPSEP 514
>gi|215697564|dbj|BAG91558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 286/401 (71%), Positives = 337/401 (84%), Gaps = 3/401 (0%)
Query: 174 MVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKL 233
M +LHCLPPSVEPRVSDH+ II+MI QI+DN AY + GDVYFSV+ FPEYG LSGRKL
Sbjct: 1 MANLHCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKL 60
Query: 234 EDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHS 293
+DNRAGERVAVD RKKNPADFALWK+AK+GEP W+SPWGPGRPGWHIECSAMSA YLGHS
Sbjct: 61 DDNRAGERVAVDERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHS 120
Query: 294 FDIHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQV 353
FDIHGGG DL+FPHHENEIAQS AAC +S I+YWIHNGFV ++S+KMSKSLGNF TIR+V
Sbjct: 121 FDIHGGGEDLIFPHHENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKV 180
Query: 354 MELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKD 413
ELYHPLALR+FL+GTHYRSPINY++ QL AS+R++Y YQTL DCE++ + A D
Sbjct: 181 TELYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKA-GD 239
Query: 414 SIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESL 473
+P +T I K H++F SMSDDLHT+V LAA+S+PLK +NDLLHTRKGKKQ RLESL
Sbjct: 240 PLPVNTTNCIQKLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQEKRLESL 299
Query: 474 AALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYE 533
+A+E+ IR VL+VLGL+ + Y E L QLREKAL+RA +TE+QVLQ+IE+RT ARK K+YE
Sbjct: 300 SAMEEKIRMVLSVLGLLPSSYYEALQQLREKALRRASMTEEQVLQKIEERTSARKAKQYE 359
Query: 534 KSDAIRKDLAAVGIALMDSPVGTTWRPALPLALQEQAVATS 574
KSD IRK+LAAVGIALMD P GTTWRP++PL+ EQ V S
Sbjct: 360 KSDEIRKELAAVGIALMDGPDGTTWRPSVPLS--EQGVVAS 398
>gi|302803761|ref|XP_002983633.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
gi|300148470|gb|EFJ15129.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
Length = 502
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 295/498 (59%), Positives = 366/498 (73%), Gaps = 19/498 (3%)
Query: 82 MSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNF 141
MSR++E+ +P++ GK+ MYVCGVT YD SHIGHARVYV FDVLYRY +GYEV YVRNF
Sbjct: 1 MSREKEVFRPRIPGKLSMYVCGVTAYDYSHIGHARVYVFFDVLYRYFPFMGYEVTYVRNF 60
Query: 142 TDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQ 201
TD+DDKII RAN+LG+DPI LS R+C+EFH+DM L CL PS+EPRVS ++ II MI+Q
Sbjct: 61 TDIDDKIIKRANDLGDDPIELSNRFCDEFHRDMASLRCLAPSLEPRVSRNIDQIIKMISQ 120
Query: 202 ILDNGFAYRVD-GDVYFSVDKF-----PEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
IL+NG+ Y +D GDVYFS+DKF YG+LSGRKL+DNRAGERVAVD RK NP DF
Sbjct: 121 ILENGYGYVLDNGDVYFSLDKFVPAFPDSYGRLSGRKLDDNRAGERVAVDDRKLNPGDFV 180
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+ GEP WESPWG GRPGWHIECSAMS A LG SFDIHGGGMDL+FPHHENEI QS
Sbjct: 181 LWKA--NGEPSWESPWGAGRPGWHIECSAMSGATLGSSFDIHGGGMDLIFPHHENEIVQS 238
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AAC+ S+++YW+HNGFVT+DSEKMSKSLGNFFTIR+V ELYHPLALR FL+ THYRSPI
Sbjct: 239 RAACHESNVTYWMHNGFVTVDSEKMSKSLGNFFTIREVFELYHPLALRWFLLCTHYRSPI 298
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
NYS QL++AS+R+FY+YQTL D ++ + + +S++
Sbjct: 299 NYSESQLQNASQRLFYLYQTLFDAKRCVEGSQKEEKSYVVSQKAAEIAKALRLSLRSSLA 358
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DDL+T V + ALS+PLK +N+LLH++KG+K R SL L + L VLG YS
Sbjct: 359 DDLNTPVTIGALSEPLKLMNELLHSKKGRKDKSRYSSLDLLRLEVEQALEVLGFSVADYS 418
Query: 496 EVLL----------QLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAV 545
+ L+ +LR KALKRA LTED++L +I +R AR +K++ KSD IR L+++
Sbjct: 419 QALITQLFLSQVLEELRSKALKRAGLTEDELLLQIHERAAARASKDFGKSDEIRDKLSSL 478
Query: 546 GIALMDSPVGTT-WRPAL 562
GI+LMD T WRP++
Sbjct: 479 GISLMDGGGDETLWRPSV 496
>gi|357114091|ref|XP_003558834.1| PREDICTED: cysteinyl-tRNA synthetase-like isoform 2 [Brachypodium
distachyon]
Length = 548
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 302/512 (58%), Positives = 372/512 (72%), Gaps = 17/512 (3%)
Query: 63 TDGDDKPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFD 122
T G+DKP + QL L+N+M++K+E P+VEGKVGMYVCGVTPYD SHIGHAR YV FD
Sbjct: 36 TTGEDKPKPSPPQLHLFNSMTKKKEPFVPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFD 95
Query: 123 VLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPP 182
VLYRYL+ LGYEV YVRNFTD+DDKII RAN+ GE SLS R+ EF DM L CLPP
Sbjct: 96 VLYRYLKFLGYEVEYVRNFTDIDDKIIDRANKAGETVTSLSTRFINEFLIDMAKLQCLPP 155
Query: 183 SVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERV 242
+ EPRV++H+ HIID+I +I+ N AY VDGDV+FS+D FPEY LSGR L+DNR G RV
Sbjct: 156 TCEPRVTEHIEHIIDLIAEIIKNDKAY-VDGDVFFSIDSFPEYNSLSGRNLDDNRPGSRV 214
Query: 243 AVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMD 302
AVD RK+N DFALWK+AKEGEPFWESPWG GRPGWHIECSAMSA YLGH FDIHGGG D
Sbjct: 215 AVDPRKRNRNDFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKD 274
Query: 303 LVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLAL 362
L+FPHHENE+AQS AA +S + W+HNGFV D EKMSKSL NFF+IR+++ LYHPLAL
Sbjct: 275 LIFPHHENELAQSRAAYPDSEVKCWMHNGFVNKDDEKMSKSLNNFFSIREIITLYHPLAL 334
Query: 363 RLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTS 422
R FL+ THY+S +N+S LE AS+R++YIYQTLHDC++ LSL + +P +
Sbjct: 335 RFFLMRTHYKSDVNHSDKALEIASDRVYYIYQTLHDCDEVLSLYREENISVPVPDEEQKL 394
Query: 423 INKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAM-------------- 468
+++ H FL SMSDDL TT VL LK L +K ++Q
Sbjct: 395 VDEHHTAFLDSMSDDLRTTDVLDGFMGLLKLQQKLEQQKKKQQQKKQQQKQQRPQKQPED 454
Query: 469 RLESLAALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARK 528
+++L +LE I+N L++LGLM S ++ +L+EKALKRA LTE+ + ++IE R AR
Sbjct: 455 HIQALISLEAEIKNKLSILGLMPP--SSLVEELKEKALKRAGLTEETLREQIEQRVAARN 512
Query: 529 NKEYEKSDAIRKDLAAVGIALMDSPVGTTWRP 560
NK+++ SD IRK LA+ GIALMD P GT WRP
Sbjct: 513 NKQFDVSDQIRKQLASKGIALMDEPTGTVWRP 544
>gi|413945619|gb|AFW78268.1| hypothetical protein ZEAMMB73_967684 [Zea mays]
Length = 568
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 303/534 (56%), Positives = 381/534 (71%), Gaps = 40/534 (7%)
Query: 70 ASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLR 129
A+A QL L+N+++++ E +P+VEGKVGMYVCGVTPYD SHIGHAR YV FDVLYRYL+
Sbjct: 27 ATALPQLVLFNSLTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFDVLYRYLK 86
Query: 130 HLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVS 189
LGYEV YVRNFTD+DDKII RANE GE SLS R+ EF DM +L CLPP+ EPRV+
Sbjct: 87 FLGYEVEYVRNFTDIDDKIIKRANERGETVTSLSSRFINEFLLDMTELQCLPPTCEPRVT 146
Query: 190 DHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKK 249
+H+ HII++IT+I++N AY ++GDVYFSV+ FPEY LSGRK + N+AG RVA D+RK+
Sbjct: 147 EHIEHIIELITKIMENDKAYAMEGDVYFSVESFPEYLSLSGRKFDQNQAGARVAFDTRKR 206
Query: 250 NPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHE 309
NPADFALWK+AKEGEPFW+SPWG GRPGWHIECSAMSA YLGH FDIHGGG DL+FPHHE
Sbjct: 207 NPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHLFDIHGGGKDLIFPHHE 266
Query: 310 NEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIR------------QVMELY 357
NE+AQS AA S + W+HNGFV D +KM+KS NFFTIR Q+ LY
Sbjct: 267 NELAQSRAAYPESEVKCWMHNGFVNKDDKKMAKSDNNFFTIRDLSLEVITVVFVQITALY 326
Query: 358 HPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPP 417
HPLALR FL+ THYRS +N+S LE AS+R++YI+QTL+DCE+ L+ + S+P
Sbjct: 327 HPLALRFFLMRTHYRSDVNHSDQALEIASDRVYYIFQTLYDCEEVLATYREEGISLSVPF 386
Query: 418 DTVTSINKFHNDFLASMSDDLHTTVVL-AALSDPLKTINDLLHTRKGKKQAMR------- 469
+ I+K H++FL MS+DL TT VL + LK IN L+ K +Q +
Sbjct: 387 EEQNLIDKHHSEFLKYMSNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQQ 446
Query: 470 -------------------LESLAALEKTIRNVLTVLGLM-STGYSEVLLQLREKALKRA 509
+++L ALE ++N L++LGLM S+ +EVL QL++KALKRA
Sbjct: 447 QQKKQQQKQQQLQKQPEHYIQALIALEIELKNKLSILGLMPSSSLAEVLKQLKDKALKRA 506
Query: 510 DLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPALP 563
LTE+++ ++IE R VARKNK++E SD IRK+LA GIALMD P GT WRP P
Sbjct: 507 GLTEEKLQEQIEQRNVARKNKQFEISDGIRKNLATKGIALMDEPSGTVWRPCEP 560
>gi|302817808|ref|XP_002990579.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
gi|300141747|gb|EFJ08456.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
Length = 492
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 293/488 (60%), Positives = 364/488 (74%), Gaps = 9/488 (1%)
Query: 82 MSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNF 141
MSR++E+ +P++ GK+ MYVCGVT YD SHIGHARVYV FDVLYRY +GYEV YVRNF
Sbjct: 1 MSREKEVFRPRIHGKLSMYVCGVTAYDYSHIGHARVYVFFDVLYRYFTFMGYEVTYVRNF 60
Query: 142 TDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQ 201
TD+DDKII RAN+LG+DPI LS R+C+EF +DM L CL PS+EPRVS ++ II MI+Q
Sbjct: 61 TDIDDKIIKRANDLGDDPIELSNRFCDEFRRDMASLRCLAPSLEPRVSRNIDQIIKMISQ 120
Query: 202 ILDNGFAYRVD-GDVYFSVDKF----PE-YGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
IL+NG+ Y +D GDVYFS+DKF P+ YG+LSGRKL+DNRAGERVAVD RK NP DF
Sbjct: 121 ILENGYGYVLDNGDVYFSLDKFVPAFPDCYGRLSGRKLDDNRAGERVAVDDRKLNPGDFV 180
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+ GEP WESPWG GRPGWHIECSAMS A LG SFDIHGGGMDL+FPHHENEI QS
Sbjct: 181 LWKA--NGEPSWESPWGAGRPGWHIECSAMSGATLGSSFDIHGGGMDLIFPHHENEIVQS 238
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AAC+ S+I+YW+HNGFVT+DSEKMSKSLGNFFTIR+V ELYHPLALR FL+ THYRSPI
Sbjct: 239 RAACHESNITYWMHNGFVTVDSEKMSKSLGNFFTIREVFELYHPLALRWFLLCTHYRSPI 298
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
NYS QL++AS+R+FY+YQTL D ++ + + + +S++
Sbjct: 299 NYSESQLQNASQRLFYLYQTLFDAKRCVEGSQKEEKSYVVSQKAAENAKALRLSLRSSLA 358
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DDL+T V + ALS+PLK +N+LLH+++G+K R SL L + L VLG YS
Sbjct: 359 DDLNTPVTIGALSEPLKLMNELLHSKRGRKDKSRYSSLDLLRLEVEQALEVLGFSVADYS 418
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
+ L KALKRA LTED++L +I +R AR +K++ KSD IR L+++GI+LMD
Sbjct: 419 QALFLPTCKALKRAGLTEDELLLQIHERAAARASKDFGKSDEIRDKLSSLGISLMDGGGD 478
Query: 556 TT-WRPAL 562
T WRP++
Sbjct: 479 ETLWRPSV 486
>gi|326503818|dbj|BAK02695.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 563
Score = 606 bits (1563), Expect = e-170, Method: Compositional matrix adjust.
Identities = 299/512 (58%), Positives = 370/512 (72%), Gaps = 27/512 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+N+M++K+EL P+VEGKVGMYVCGVTPYD SH+GHAR YV FDVLYRYL+ LGYEV
Sbjct: 48 LQLFNSMTKKKELFVPRVEGKVGMYVCGVTPYDFSHVGHARAYVAFDVLYRYLKFLGYEV 107
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRNFTD+DDKII RAN+ GE SLS R+ EF D+ +L CLPP+ EPRV++H+ +I
Sbjct: 108 DYVRNFTDIDDKIIKRANQNGETVTSLSSRFITEFLADVAELQCLPPTHEPRVTEHIENI 167
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I +IT+I+ NG AY VDGDVYFSVD FPEY LSGR L+ NRAG RVAVD+RK+NPADFA
Sbjct: 168 IKLITEIIKNGKAYVVDGDVYFSVDNFPEYLSLSGRILDHNRAGSRVAVDTRKRNPADFA 227
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+AKEGEP WESPWG GRPGWHIECSAMSA YLGH FDIHGGG DL+FPHHENE+AQS
Sbjct: 228 LWKAAKEGEPSWESPWGNGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQS 287
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA S + W+HNGF+ ID +KMSKS+ NFFTIR ++ LYHPLALR FL+ THY+S
Sbjct: 288 RAAYPESEVKCWMHNGFINIDDQKMSKSVNNFFTIRDIITLYHPLALRFFLMRTHYKSDA 347
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
N+S LE AS+R++YI+QTL+DC++ +SL +P + ++ H FL SMS
Sbjct: 348 NHSDKALEIASDRVYYIFQTLYDCDEVVSLHREENTSAPVPAEEQKLVDDHHKAFLESMS 407
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAM--------------------------R 469
DDL TT VL + LK IN L+ K +Q +
Sbjct: 408 DDLRTTDVLDGFMELLKAINGNLNDLKKLQQKLEQQKKKQQQQKKQQQKQQRPQKQPEDH 467
Query: 470 LESLAALEKTIRNVLTVLGLM-STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARK 528
+++L AL I++ L++LGLM + +EVL QL+EKALKRA LTE+ + ++IE R AR
Sbjct: 468 IQALNALGAEIKHKLSILGLMPPSPLAEVLKQLKEKALKRAGLTEESLSEQIEHRIAARN 527
Query: 529 NKEYEKSDAIRKDLAAVGIALMDSPVGTTWRP 560
NK++E SD IRK+LA+ GIALMD P GT WRP
Sbjct: 528 NKQFEVSDQIRKELASKGIALMDEPTGTVWRP 559
>gi|224031283|gb|ACN34717.1| unknown [Zea mays]
gi|413949577|gb|AFW82226.1| hypothetical protein ZEAMMB73_235131 [Zea mays]
gi|413949578|gb|AFW82227.1| hypothetical protein ZEAMMB73_235131 [Zea mays]
Length = 561
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 302/528 (57%), Positives = 378/528 (71%), Gaps = 34/528 (6%)
Query: 70 ASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLR 129
A+A QL L+N+ +++ E +P+VEGKVGMYVCGVTPYD SHIGHAR YV FDVLYRYL+
Sbjct: 28 ATAPPQLLLFNSFTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFDVLYRYLK 87
Query: 130 HLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVS 189
LGYEV YVRNFTD+DDKII RANE GE SLS ++ EF DM +L CLPP+ EPRV+
Sbjct: 88 FLGYEVEYVRNFTDIDDKIIKRANERGETVTSLSSQFINEFLLDMTELQCLPPTCEPRVT 147
Query: 190 DHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKK 249
+H+ HII +ITQI++NG AY ++GDVYFSV+ FPEY LSGRK + N+AG RVA D+RK+
Sbjct: 148 EHIEHIIKLITQIMENGKAYAIEGDVYFSVESFPEYLSLSGRKFDQNQAGARVAFDTRKR 207
Query: 250 NPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHE 309
NPADFALWK+AKEGEPFW+SPWG GRPGWHIECSAMSA YLGH FDIHGGG DL+FPHHE
Sbjct: 208 NPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHE 267
Query: 310 NEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGT 369
NE+AQS AA +S + W+HNGFV D +KM+KS NFFTIR ++ LYHP+ALR FL+ T
Sbjct: 268 NELAQSRAAYPDSEVKCWMHNGFVNKDDKKMAKSDNNFFTIRDIIALYHPMALRFFLMRT 327
Query: 370 HYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHND 429
HYRS +N+S LE AS+R++YIYQTL+DCE+ L+ +P + I K H++
Sbjct: 328 HYRSDVNHSDQALEIASDRVYYIYQTLYDCEEVLATYREEGTSLPVPSEEQNLIGKHHSE 387
Query: 430 FLASMSDDLHTTVVL-AALSDPLKTINDLLHTRKGKKQAMR------------------- 469
FL MS+DL TT VL + LK IN L+ K +Q +
Sbjct: 388 FLKHMSNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQQQQKKQQQQKQQQ 447
Query: 470 -------------LESLAALEKTIRNVLTVLGLM-STGYSEVLLQLREKALKRADLTEDQ 515
+++L ALE ++N L++LGLM S+ +EVL QL++K+LKRA LTE+Q
Sbjct: 448 QKQQQLQKQPEDYIQALIALETELKNKLSILGLMPSSSLAEVLKQLKDKSLKRAGLTEEQ 507
Query: 516 VLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPALP 563
+ ++IE R VARKNK++E SD IRK+LA GIALMD P GT WRP P
Sbjct: 508 LQEQIEQRNVARKNKQFEISDGIRKNLATKGIALMDEPSGTVWRPCEP 555
>gi|224031007|gb|ACN34579.1| unknown [Zea mays]
Length = 400
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 281/401 (70%), Positives = 338/401 (84%), Gaps = 1/401 (0%)
Query: 174 MVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKL 233
M +L CLPPSVEPRVSDH+ II+MI QILDN AY V GDVYFSVD FPEYG+LSGRKL
Sbjct: 1 MANLQCLPPSVEPRVSDHVDEIINMIKQILDNRCAYVVGGDVYFSVDNFPEYGELSGRKL 60
Query: 234 EDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHS 293
+DNRAGERVAVD RK+NPADFALWK+AK+GEP+W+SPWGPGRPGWHIECSAMSA YLGHS
Sbjct: 61 DDNRAGERVAVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHS 120
Query: 294 FDIHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQV 353
FDIHGGG DL+FPHHENEIAQS AAC +S I+YWIHNGFV ++S+KMSKSLGNF TIR+V
Sbjct: 121 FDIHGGGEDLIFPHHENEIAQSRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKV 180
Query: 354 MELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKD 413
+E+YHPLALR+FL+GTHYRSPINY++ QL AS+R++Y YQTL DCE+ + + +
Sbjct: 181 IEMYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCEE-ICQHQQSNTGN 239
Query: 414 SIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESL 473
+P +T+ I K H++F SMSDDLHT+V LAA+S+PLK +NDLLHTRKGKKQ RLESL
Sbjct: 240 PLPANTLNYIQKLHDEFETSMSDDLHTSVALAAMSEPLKVMNDLLHTRKGKKQDKRLESL 299
Query: 474 AALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYE 533
+ALE+ IR VL+VLGL+ + Y E L QLR+KAL+RA +TE+ V+Q+IE+RT ARK K+YE
Sbjct: 300 SALEEKIRVVLSVLGLLPSSYHEALQQLRDKALRRASITEELVVQKIEERTAARKAKQYE 359
Query: 534 KSDAIRKDLAAVGIALMDSPVGTTWRPALPLALQEQAVATS 574
KSD IRK+LAAVGIALMD P GTTWRP+LPL +E +A +
Sbjct: 360 KSDEIRKELAAVGIALMDGPDGTTWRPSLPLPEEEAVLAKT 400
>gi|222612964|gb|EEE51096.1| hypothetical protein OsJ_31805 [Oryza sativa Japonica Group]
Length = 561
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 287/556 (51%), Positives = 377/556 (67%), Gaps = 58/556 (10%)
Query: 61 GKTDGDDKPASA--STQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVY 118
G++ G+++P + +L L++T ++ +P+VEGKV MYVCGVTPYD SH+GHAR Y
Sbjct: 5 GRSVGEEEPRGKRPAAELRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAY 64
Query: 119 VTFDVLYRYLRHLGYEVC-----------------------------------------Y 137
V FDVL+RYL++LG+E+ +
Sbjct: 65 VAFDVLFRYLKYLGFEIIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKH 124
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+ D+ KII RANE GED +SLS R+ +EFH+DM +L CLPP+ EPRV+ H+ IID
Sbjct: 125 IEQIIDLITKIIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIID 184
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+IT+I+DNG AY ++GDVYFSVD FP+Y LSGRK++ NR G RVAVD+RK+NPADFALW
Sbjct: 185 LITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFALW 244
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
KSAKEGEP WESPWG GRPGWHIECSAMSA YLG+ FDIHGGG DL+FPHHENE+AQS A
Sbjct: 245 KSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQSQA 304
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A S + W+HNGFV D +KM+K+ NFFTIR ++ LYHP+ALRLFL+ THYRS +N+
Sbjct: 305 AYPESEVKCWMHNGFVNKDGQKMAKADKNFFTIRDIISLYHPMALRLFLMRTHYRSDVNH 364
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L+ AS R++YIYQTLHD E+ +SL L++SIP D I + ++FL MSDD
Sbjct: 365 SDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPADDQKLIEENRSNFLEKMSDD 424
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMR----------LESLAALEKTIRNVLTVL 487
LHTT AAL +K L H +K + Q + +++L AL+ + + L++L
Sbjct: 425 LHTT---AALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSIL 481
Query: 488 GLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGI 547
GLM S + QL++KALKRA +T +Q+ Q IE RT+ARKNK++ +SD IR +L+A+GI
Sbjct: 482 GLMPM--SSLAEQLKDKALKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGI 539
Query: 548 ALMDSPVGTTWRPALP 563
ALM P GT WRP+ P
Sbjct: 540 ALMGEPTGTLWRPSEP 555
>gi|297801734|ref|XP_002868751.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314587|gb|EFH45010.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 287/498 (57%), Positives = 361/498 (72%), Gaps = 9/498 (1%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
+L LYNTM++++E++ P GK+G+YVCG+T YD SHIGHAR V+FDVLYRYL+HLGYE
Sbjct: 7 ELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHLGYE 66
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V +VRNFTDVDDKII RANE GEDP+ LS R+CEE+ DM L CL P+ +PRVS+HM H
Sbjct: 67 VNFVRNFTDVDDKIIIRANENGEDPLDLSNRFCEEYLVDMGALQCLLPTHQPRVSEHMDH 126
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
II MI +I++ Y V+GDV+FSVDK P YG+LSG+ LE RAGERVAVDSRK+NPADF
Sbjct: 127 IIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDSRKRNPADF 186
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK EP WESPWGPGRPGWHIECSAMSA YL FDIHGGG DL FPHHENEIAQ
Sbjct: 187 ALWKAAKPEEPSWESPWGPGRPGWHIECSAMSAHYLSPKFDIHGGGADLKFPHHENEIAQ 246
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
+CAAC +S ++YW+HNG VTI++EKM+KS NF TIR++ YHPLALR FL+ YRSP
Sbjct: 247 TCAACEDSGVNYWLHNGHVTINNEKMAKSKKNFKTIREITASYHPLALRHFLMSAQYRSP 306
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDS----IPPDTVTSINKFHNDF 430
+++S QLES+S+ ++Y+YQTL D ++ LS A +D P+ I K ++F
Sbjct: 307 LSFSASQLESSSDALYYVYQTLQDLDEDLSPYREALSEDGGKAEQTPEGKDIIKKLKSEF 366
Query: 431 LASMSDDLHTTVVL-AALSDPLKTIN---DLLHTRKGKKQAMRLESLAALEKTIRNVLTV 486
+ M DDL+T +L A D LK IN L + K++ L SL +EK R VL V
Sbjct: 367 ESKMLDDLNTAHILTGAYQDALKFINANRSKLKKMQKKQRMSMLVSLVEIEKAAREVLDV 426
Query: 487 LGLMST-GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAV 545
LGL++T Y+EVL +++ K L RA++ E+ +L+ IEDR AR NK++ KSD IR+ L
Sbjct: 427 LGLLTTLSYAEVLKEMKLKTLIRAEMGEEDILREIEDRITARNNKDFAKSDEIREKLTRK 486
Query: 546 GIALMDSPVGTTWRPALP 563
GIALMD T WRP P
Sbjct: 487 GIALMDFGKETVWRPCFP 504
>gi|308808270|ref|XP_003081445.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
tauri]
gi|116059908|emb|CAL55967.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
tauri]
Length = 661
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 282/502 (56%), Positives = 348/502 (69%), Gaps = 19/502 (3%)
Query: 74 TQLWLYNTMSRKRELVKPK--VEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHL 131
T+LWL NTM+RK+EL P+ KV MYVCGVT YD SHIGHARVYV FDVLYR L L
Sbjct: 158 TKLWLTNTMTRKKELFIPRDPAGKKVQMYVCGVTVYDYSHIGHARVYVAFDVLYRRLMGL 217
Query: 132 GYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDH 191
GY+V Y RNFTD+DDKII R+NE GE +L+ ++ + FH+DM L CL P++EPR ++
Sbjct: 218 GYDVTYCRNFTDIDDKIIKRSNESGETCEALTNKFIDAFHEDMTALGCLRPTLEPRATEC 277
Query: 192 MPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNP 251
+ II I +++ G AY GDVYFSVD P YG LSGRK +DNRAGERVAVD RKKNP
Sbjct: 278 VDDIIAFIERLIAKGNAYEASGDVYFSVDTLPAYGALSGRKQDDNRAGERVAVDERKKNP 337
Query: 252 ADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
ADFALWK+AK GEP W SPWG GRPGWHIECSAM LG + DIHGGG DLVFPHHENE
Sbjct: 338 ADFALWKTAKPGEPTWTSPWGDGRPGWHIECSAMIEKMLGPTIDIHGGGQDLVFPHHENE 397
Query: 312 IAQSCAACN-------NSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRL 364
+AQS AAC N + YW+HNGFV +DSEKMSKSLGNFFTIR+V++ YHP LR
Sbjct: 398 LAQSSAACGCGAHADENPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLDKYHPFVLRF 457
Query: 365 FLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPP-----DT 419
L+G HYR+PINY+ LE AS+R++Y+YQTL D + DAA +D+ P D
Sbjct: 458 MLLGAHYRAPINYTQRALEEASDRVYYLYQTLQDVRSVIR--DAAVEEDATKPVPMVADA 515
Query: 420 VTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKT 479
+ N+ L S++DDL+T V+A LS PLK++ND + T+ GKK R+ +L AL +
Sbjct: 516 LKLANETEKQVLESLNDDLNTPAVMATLSAPLKSMNDFMTTKAGKKAVGRVRALQALLTS 575
Query: 480 IRNVLTVLGLMSTGYSEVLL-QLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAI 538
I VL +G M G +V L +LR KAL RA LTED +L +IE+R AR K++ +SD +
Sbjct: 576 IEGVLEAVG-MPRGEEDVFLGELRAKALHRAGLTEDALLAKIEERKKARDAKDFAESDRL 634
Query: 539 RKDLAAVGIALMDSPVGTTWRP 560
R +L+A GI LMD WRP
Sbjct: 635 RDELSARGIGLMDG-AAVAWRP 655
>gi|384251815|gb|EIE25292.1| tRNA synthetase class I (C) family protein [Coccomyxa
subellipsoidea C-169]
Length = 536
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 280/513 (54%), Positives = 358/513 (69%), Gaps = 12/513 (2%)
Query: 63 TDGDDKPASASTQLWLYNTMSRKRELVKPK--VEGKVGMYVCGVTPYDLSHIGHARVYVT 120
T DD LWL+NTMS ++EL +P+ KV MY CGVT YD SH+GHARVY
Sbjct: 19 TTSDDALQEHPKDLWLHNTMSGRKELFQPRPGQGNKVSMYCCGVTVYDYSHVGHARVYCA 78
Query: 121 FDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCL 180
FDVL+RYLRHLGYEV YVRNFTD+DDKII RA+E GEDP+ LS+R+ EFH DM L+CL
Sbjct: 79 FDVLFRYLRHLGYEVDYVRNFTDIDDKIIKRASETGEDPLQLSQRFIHEFHTDMDALNCL 138
Query: 181 PPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGE 240
P+ EP+ +D + ++DMI +I+ G Y DG V+FSV+ P YG+LSGR L+DNRAGE
Sbjct: 139 APTSEPKATDFISQMVDMIGRIVKAGHGYEADGSVWFSVESVPGYGRLSGRSLDDNRAGE 198
Query: 241 RVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGG 300
RVAV++ K+NPADF LWK+AK GEP W+SPWGPGRPGWHIECSAM +G DIHGGG
Sbjct: 199 RVAVNTTKRNPADFVLWKAAKVGEPKWDSPWGPGRPGWHIECSAMIRELMGPIIDIHGGG 258
Query: 301 MDLVFPHHENEIAQSCAA---CNNSH-------ISYWIHNGFVTIDSEKMSKSLGNFFTI 350
DL+ PHH+NE+ QS AA C+ + + +W+H GFV +DSEKMSKSLGNFFTI
Sbjct: 259 RDLIHPHHDNELVQSQAAACECDRENMLDHRDFVRWWMHLGFVNVDSEKMSKSLGNFFTI 318
Query: 351 RQVMELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAA 410
R V+++YHP+ALR FLI T YR INY+ L+ AS+R++YIYQTL D E AL+ AA
Sbjct: 319 RDVLQMYHPMALRWFLINTQYRQAINYTERSLQEASDRLYYIYQTLQDAEAALTAAAAAG 378
Query: 411 LKDSIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRL 470
+ S+ + ++ K AS+ DDL+T AALS+PLKT+NDLLHT+KGKK RL
Sbjct: 379 EQVSVATEQHSNGTKLLKSVEASLCDDLNTPQAFAALSEPLKTMNDLLHTKKGKKAGGRL 438
Query: 471 ESLAALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNK 530
+++A L++ + +VL +LGL + VL+++R++AL RA L E V IE R VAR K
Sbjct: 439 QTIATLQQALNSVLELLGLGAGDIGAVLVEMRQRALHRAGLKEQDVELSIERRAVARAAK 498
Query: 531 EYEKSDAIRKDLAAVGIALMDSPVGTTWRPALP 563
+Y +D R LA GI +MD GT WRP +P
Sbjct: 499 DYASADKERAFLAERGIMIMDGSEGTLWRPGIP 531
>gi|15241557|ref|NP_198699.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|192807340|gb|ACF06122.1| At5g38830 [Arabidopsis thaliana]
gi|332006981|gb|AED94364.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 511
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 284/498 (57%), Positives = 359/498 (72%), Gaps = 9/498 (1%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
+L LYNTM++++E++ P GK+G+YVCG+T YD SHIGHAR V+FDVLYRYL+HL Y+
Sbjct: 7 ELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHLDYD 66
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V +VRNFTDVDDKII RAN+ GEDP+ LS R+C+E+ DM L CLPP+ +PRVS+HM +
Sbjct: 67 VTFVRNFTDVDDKIIDRANKNGEDPLDLSNRFCDEYLVDMGALQCLPPTHQPRVSEHMDN 126
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
II MI +I++ Y V+GDV+FSVDK P YG+LSG+ LE RAGERVAVDSRK+NPADF
Sbjct: 127 IIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDSRKRNPADF 186
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK EP WESPWGPGRPGWHIECSAMS YL FDIHGGG DL FPHHENEIAQ
Sbjct: 187 ALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLKFPHHENEIAQ 246
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
+CAAC +S ++YW+HNG VTI++EKM+KS NF TIR++ YHPLALR FL+ YRSP
Sbjct: 247 TCAACEDSGVNYWLHNGHVTINNEKMAKSKHNFKTIREITASYHPLALRHFLMSAQYRSP 306
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTS----INKFHNDF 430
++++ QLES+SE ++Y+YQTL D ++ LS A +D + I K +F
Sbjct: 307 LSFTASQLESSSEALYYVYQTLQDLDEGLSPYQDALSEDGGKSEQTAEGKDIIKKLKTEF 366
Query: 431 LASMSDDLHTTVVL-AALSDPLKTINDLLHTRKG--KKQAMR-LESLAALEKTIRNVLTV 486
+ M DDL+T +L A D LK IN L K KKQ M L SL +EK R VL V
Sbjct: 367 ESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQKKQRMSMLVSLVEIEKAAREVLDV 426
Query: 487 LGLMST-GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAV 545
LGL++T Y+E+L +++ K L RA++ E+ + Q IE+R ARKNK++ KSD IR+ L
Sbjct: 427 LGLLTTLSYAEILKEMKLKTLIRAEIGEEGISQLIEERITARKNKDFAKSDEIREKLTRK 486
Query: 546 GIALMDSPVGTTWRPALP 563
GIALMD T WRP P
Sbjct: 487 GIALMDIGKETVWRPCFP 504
>gi|110289208|gb|AAP54161.2| tRNA synthetase class I family protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 491
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 281/515 (54%), Positives = 363/515 (70%), Gaps = 46/515 (8%)
Query: 61 GKTDGDDKPASA--STQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVY 118
G++ G+++P + +L L++T ++ +P+VEGKV MYVCGVTPYD SH+GHAR Y
Sbjct: 5 GRSVGEEEPRGKRPAAELRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAY 64
Query: 119 VTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLH 178
V FDVL+RYL++LGYEV YVRNFTD+DDKII RANE GED +SLS R+ +EFH+DM +L
Sbjct: 65 VAFDVLFRYLKYLGYEVNYVRNFTDIDDKIIKRANEAGEDALSLSSRFIDEFHRDMYELQ 124
Query: 179 CLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRA 238
CLPP+ EPRV+ H+ IID+IT+I+DNG AY ++GDVYFSVD FP+Y LSGRK++ NR
Sbjct: 125 CLPPTHEPRVTKHIEQIIDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRP 184
Query: 239 GERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHG 298
G RVAVD+RK+NPADFALWKSAKEGEP WESPWG GRPGWHIECSAMSA YLG+ FDIHG
Sbjct: 185 GTRVAVDARKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHG 244
Query: 299 GGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYH 358
GG DL+FPHHENE+AQS AA S +++ LYH
Sbjct: 245 GGKDLIFPHHENELAQSQAAYPES-----------------------------EIISLYH 275
Query: 359 PLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPD 418
P+ALRLFL+ THYRS +N+S L+ AS R++YIYQTLHD E+ +SL L++SIP D
Sbjct: 276 PMALRLFLMRTHYRSDVNHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPAD 335
Query: 419 TVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMR--------- 469
I + ++FL MSDDLHTT AAL +K L H +K + Q +
Sbjct: 336 DQKLIEENRSNFLEKMSDDLHTT---AALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPED 392
Query: 470 -LESLAALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARK 528
+++L AL+ + + L++LGLM S + QL++KALKRA +T +Q+ Q IE RT+ARK
Sbjct: 393 YIQALVALQNEVTDKLSILGLMPM--SSLAEQLKDKALKRAGMTAEQLQQMIEQRTLARK 450
Query: 529 NKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPALP 563
NK++ +SD IR +L+A+GIALM P GT WRP+ P
Sbjct: 451 NKDFAESDRIRTELSALGIALMGEPTGTLWRPSEP 485
>gi|357499285|ref|XP_003619931.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
gi|355494946|gb|AES76149.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
Length = 584
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 287/521 (55%), Positives = 359/521 (68%), Gaps = 48/521 (9%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN+ + + E+ +P+V+GKV MYVCGVT YD SH+GHAR ++FD+L RYL+HL YEV
Sbjct: 51 LQLYNSKNNEMEVFEPEVKGKVSMYVCGVTSYDYSHLGHARAAISFDILVRYLKHLKYEV 110
Query: 136 CYVRNFTDVDDK------------IIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPS 183
YVRNFTD+ II RANE G DP+ LSR +C+E++ DM DL C P+
Sbjct: 111 TYVRNFTDIIIIYLFIYFFEEAKLIIKRANEKGVDPLELSRHFCDEYNVDMSDLLCERPT 170
Query: 184 VEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVA 243
EPRVSDH+ I DMIT+I++N FAY VDGDV++SV+KFP YG LSG+
Sbjct: 171 KEPRVSDHIDQIKDMITKIINNDFAYEVDGDVFYSVEKFPNYGALSGQ------------ 218
Query: 244 VDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDL 303
RK++PADFALWK+AK GEP W+SPWGPGRPGWHIECSAMSA YL H FDIHGGG+DL
Sbjct: 219 ---RKRHPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYLSHKFDIHGGGIDL 275
Query: 304 VFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALR 363
+FPHHENEIAQ+ AA S I YW+HNG VT ++EKMSKSLGNFFT+R++ E YHPLALR
Sbjct: 276 IFPHHENEIAQNRAADKESRIKYWLHNGHVTNNNEKMSKSLGNFFTVREITERYHPLALR 335
Query: 364 LFLIGTHYRSPINYSVVQLESASERIFYIYQ------TLHDCEKALS--LLDAAALKDSI 415
FLI HYR+P+NYS+ QLE++S+ I+YI+Q TL DC ALS L + + KD I
Sbjct: 336 HFLISAHYRAPLNYSIAQLETSSDAIYYIFQTSSSLKTLEDCRDALSSFLQEDSEKKDQI 395
Query: 416 PPDTVTSINKFHNDFLASMSDDLHTTVVL-AALSDPLKTINDLLHTRKGKKQAMRLESLA 474
INK +F M+DDL T V+L AL + LK +N L + +SL
Sbjct: 396 NA-AEKCINKLKEEFQTEMNDDLQTHVILKGALLEALKFMNRSLQFK---------QSLL 445
Query: 475 ALEKTIRNVLTVLGLMST-GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYE 533
+E+ +R VL VLGL+S+ Y+EVL QL++KALKRA LTE +VL+ IE+R AR NK++
Sbjct: 446 KVEQEVREVLKVLGLLSSLSYAEVLQQLKDKALKRAGLTEKEVLKLIEERKQARINKDFA 505
Query: 534 KSDAIRKDLAAVGIALMDSPVGTTWRPALPLA-LQEQAVAT 573
KSD IR DL A GIAL D WRP +P L QAV+T
Sbjct: 506 KSDNIRTDLTAKGIALEDVDNEMIWRPCIPSKPLVAQAVST 546
>gi|307104948|gb|EFN53199.1| hypothetical protein CHLNCDRAFT_137034 [Chlorella variabilis]
Length = 606
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 291/534 (54%), Positives = 366/534 (68%), Gaps = 36/534 (6%)
Query: 75 QLWLYNTMSRKRELVKPKVE--GKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLG 132
+L L+NT++R++E+ +P+ + +V MYVCGVT YD SHIGHAR YV FDV+YR LRHLG
Sbjct: 73 ELLLHNTLTRQKEVFRPRADQGNRVSMYVCGVTVYDYSHIGHARAYVAFDVIYRLLRHLG 132
Query: 133 YEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHM 192
Y V YVRNFTDVDDKIIARA GE+P++L+RR+ EFH DM L CLPP +EPR ++++
Sbjct: 133 YAVTYVRNFTDVDDKIIARAAAAGEEPLALARRFIAEFHADMELLGCLPPDLEPRATEYI 192
Query: 193 PHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
PH++ MI +I+D+G AY V GDV+F V P YG+LSGR EDNRAGERVAVD RK+ A
Sbjct: 193 PHMVAMIQRIIDHGHAYAVGGDVFFDVASLPGYGRLSGRSQEDNRAGERVAVDERKRGAA 252
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DFALWK+AK GEP WESPWGPGRPGWHIECSAM LG DIHGGG DLVFPHHENE+
Sbjct: 253 DFALWKAAKPGEPTWESPWGPGRPGWHIECSAMIREVLGEVIDIHGGGRDLVFPHHENEL 312
Query: 313 AQSCAA-----CNNSH---------------------ISYWIHNGFVTIDSEKMSKSLGN 346
AQS AA C + H + YW+HNGFV +DSEKMSKSLGN
Sbjct: 313 AQSRAASGACSCGHDHGAATASASASNGSGGGGQDEFVRYWLHNGFVNVDSEKMSKSLGN 372
Query: 347 FFTIRQVMELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKAL--- 403
FFTIR+V+ YHP ALR FL+GT YR PINY+ LE AS+R+FY+YQTL D L
Sbjct: 373 FFTIREVVAQYHPRALRWFLVGTQYRQPINYTQRALEEASDRVFYLYQTLADMGAVLDGG 432
Query: 404 ---SLLDAAALKDSIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHT 460
AAA + P S + + A+++DD++T + +AA S PLK+ NDL+HT
Sbjct: 433 EEGQAALAAARQQLAAPAAAASGSGLLAEVQAALTDDVNTPLAIAAFSAPLKSANDLVHT 492
Query: 461 RKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRI 520
+KGKKQA RL++LA + L +LGL + +VLL+LR+ ALKRA L ED++ I
Sbjct: 493 KKGKKQAGRLQALAECYAALETCLQLLGLWAEQPQDVLLELRQLALKRAGLGEDEIAAAI 552
Query: 521 EDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPA--LPLALQEQAVA 572
E+R AR K+Y +D +R L A GI +MD+P GTTW+P L +A +E A A
Sbjct: 553 EERAAARAAKDYAAADVVRLRLEAAGILIMDTPQGTTWKPGPRLNIAEEENAAA 606
>gi|412992649|emb|CCO18629.1| cysteinyl-tRNA synthetase [Bathycoccus prasinos]
Length = 657
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 288/571 (50%), Positives = 364/571 (63%), Gaps = 27/571 (4%)
Query: 15 ASIKFSPFINSFHTLQLRPPKPNNRRVFRCFSTLNSSPNVIDDKSNGKTDGDDKPASAST 74
+S K +P I LQ R +P V R FS+ N++ +DK +
Sbjct: 89 SSHKIAPTI-----LQNRLVRPERIAVQRNFSSSNAAAAGASPSPPPTNAAEDKNEQTTQ 143
Query: 75 QLWLYNTMSRKRELVKPKVEG--KVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLG 132
L L+NTMSRK+E+ KP+ E KV MYVCGVT YD SHIGHARVYV FDVLYR LR LG
Sbjct: 144 TLMLHNTMSRKKEIFKPRAENGNKVQMYVCGVTVYDYSHIGHARVYVAFDVLYRTLRQLG 203
Query: 133 YEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHM 192
Y+V Y RNFTD+DDKII RANE G L+ ++ + FH+DM L CL P +EPR + H+
Sbjct: 204 YDVTYCRNFTDIDDKIINRANESGTSCEELTEKFIQAFHEDMEALGCLRPDLEPRATQHV 263
Query: 193 PHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
IID+IT++++ AY VDGDVYFSVD +YG LSGR EDNRAGERV VD RKKNPA
Sbjct: 264 GDIIDLITRLIEKNHAYAVDGDVYFSVDSLSKYGSLSGRNQEDNRAGERVVVDGRKKNPA 323
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DFALWK+AK EP WESPWG GRPGWHIECSAM LG DIHGGG DLVFPHHENE+
Sbjct: 324 DFALWKTAKPNEPVWESPWGNGRPGWHIECSAMIEKLLGPVIDIHGGGQDLVFPHHENEL 383
Query: 313 AQSCAAC--------NNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRL 364
AQS AAC + + YW+HNGFV +DSEKMSKSLGNFFTIR+V+ YHP+ LR
Sbjct: 384 AQSSAACDCEIHKSEDKKFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLARYHPMVLRF 443
Query: 365 FLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDA---AALKDS------I 415
L+G HYR+PINY+ LE +S+R++YIYQTL D AL L D A L++S +
Sbjct: 444 MLLGAHYRAPINYTQKALEESSDRLYYIYQTLLDARAALELKDEEFRAELENSKLKLSPL 503
Query: 416 PPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAA 475
D + ++ DDL+T + +A+LS PLKT ND L T+ GKK RL +L++
Sbjct: 504 AADAKKLAEETKVSVAQALYDDLNTPLAIASLSGPLKTTNDFLTTKAGKKAVGRLSALSS 563
Query: 476 LEKTIRNVLTVLGLMST--GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYE 533
L + N L++LGL + + +L +L+ ALKRA L E + + R AR K +E
Sbjct: 564 LVSELENTLSILGLPTAVDKSTSILAELKALALKRAGLEEKDLEALMAQRANARAAKNFE 623
Query: 534 KSDAIRKDLAA-VGIALMDSPVGTTWRPALP 563
+SD +R++LA+ + WRP +P
Sbjct: 624 ESDRLREELASKGIGLMDGGGGDDAWRPIVP 654
>gi|357140592|ref|XP_003571849.1| PREDICTED: LOW QUALITY PROTEIN: cysteinyl-tRNA synthetase-like
[Brachypodium distachyon]
Length = 532
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 277/516 (53%), Positives = 349/516 (67%), Gaps = 35/516 (6%)
Query: 87 ELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNFTDVDD 146
E+ +P VEGKV MYVCGVT YD SH+GHAR YV FDVLYRYL+ LGYEV YV NFTD+DD
Sbjct: 17 EVFRPVVEGKVSMYVCGVTTYDFSHVGHARAYVAFDVLYRYLKCLGYEVQYVHNFTDIDD 76
Query: 147 KIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQILDNG 206
KII RANE GE +LS R+ +EF DMV L CLPP+ EPRV+DH+ IID+IT+I
Sbjct: 77 KIIRRANEAGETATNLSSRFIDEFLHDMVQLQCLPPTHEPRVTDHIKQIIDLITKIKGKD 136
Query: 207 FAYRVDGD-VYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKEGEP 265
AY ++G+ VYFSVD FPEY LSGRKLE N G RVA+D+RK+NPADFALWKSAK+GEP
Sbjct: 137 KAYVIEGEGVYFSVDNFPEYLSLSGRKLEHNLPGSRVAIDTRKRNPADFALWKSAKDGEP 196
Query: 266 FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNNSHIS 325
FWESPWG GRPGWHIECSAMS YLG FDIHGGG DL+FPHHENE+AQS AA + S +
Sbjct: 197 FWESPWGRGRPGWHIECSAMSEHYLGQLFDIHGGGKDLIFPHHENELAQSRAANSKSEVK 256
Query: 326 Y--WIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYSVVQLE 383
W+HNGFV + +KM+K NFFTI ++ LYHP+ALRLFL+ THYRS +N S LE
Sbjct: 257 LECWMHNGFVNNNGQKMAKPDKNFFTI-DIISLYHPMALRLFLMRTHYRSDVNQSDTALE 315
Query: 384 SASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDDLHTTVV 443
AS R++YIYQTL D ++ +SL L +P ++K H +FL M++DLHT
Sbjct: 316 FASGRVYYIYQTLQDSQEVISLYCDDKLDFPVPTGDQAVVDKNHEEFLKHMANDLHTKGA 375
Query: 444 LAALSDPLKTINDLLHTRKGKKQAMR------------------------------LESL 473
L L P+ IN+ L K +Q + +++L
Sbjct: 376 LDELMKPIXAINNNLSDLKKLQQKLEQEKKKQAVKKQQQQQTEEGKQQAQKQTGHYVQAL 435
Query: 474 AALEKTIRNVLTVLGLMST-GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEY 532
AL + + L++LGLM +E + +L++KALKRA ++E+++ Q I RTV RKNK++
Sbjct: 436 VALHGEVTSKLSILGLMPXPSLAEAVKELKDKALKRAGMSEEELHQVIXQRTVTRKNKDF 495
Query: 533 EKSDAIRKDLAAVGIALMDSPVGTTWRPALPLALQE 568
+SD IR L+A GIALMD P GT W+PA P ++E
Sbjct: 496 AESDRIRTVLSARGIALMDEPTGTVWKPAEPELVEE 531
>gi|297816954|ref|XP_002876360.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322198|gb|EFH52619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 283/504 (56%), Positives = 352/504 (69%), Gaps = 40/504 (7%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
+L LYNTM++ +E+ KP GK+GMYVCG+T YD SHIGHAR V+FD+LYRYLRHLGYE
Sbjct: 7 ELTLYNTMTQLKEVFKPINPGKIGMYVCGITAYDYSHIGHARAAVSFDLLYRYLRHLGYE 66
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V YVRNFTDVDDK A + GE P+ LS R+CEE+ DM L CL P+ +PRVSDHM H
Sbjct: 67 VHYVRNFTDVDDK----AKKCGEKPLDLSNRFCEEYLLDMTALQCLIPTRQPRVSDHMEH 122
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
II MI +I++NG Y V GDV+FSVDK P YGQLSG++L+ +AG+RVAVDSRK+NPADF
Sbjct: 123 IIKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAVDSRKRNPADF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALW +AK GEP WESPWGPGRPGWHIECSAMSA YL FDIHGGG DL FPHHENEIAQ
Sbjct: 183 ALWNAAKSGEPSWESPWGPGRPGWHIECSAMSAHYLSPRFDIHGGGADLKFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
+CAAC +S ++YW+HNG VT ++ KM KSL NFFTIR++ YHPLALR FL+ YRSP
Sbjct: 243 TCAACEDSGVNYWLHNGHVTNNNVKMGKSLDNFFTIREITAKYHPLALRHFLMSAQYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYSV QLES+S+ ++ YQTL D K LS + M
Sbjct: 303 LNYSVSQLESSSDALYCAYQTLEDLVKYLS------------------------PYREEM 338
Query: 435 SDDLHTTVVLAALSDPLKTINDLLH---------TRKGKKQAMRL-ESLAALEKTIRNVL 484
S D+ T A + +K + + L + KKQ M L SL +EK +R VL
Sbjct: 339 SGDVGKTQQTAEAKEMIKKVKNALKFINVSISKLKKIQKKQRMSLIVSLVEVEKAVREVL 398
Query: 485 TVLGLMST-GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLA 543
VLGL++T Y E L ++++KAL RA + E++VL+RI++R +ARKNK++++SD IR+ LA
Sbjct: 399 DVLGLLTTLSYDEFLKEMKQKALTRAGIGEEEVLRRIDERKLARKNKDFKRSDQIRELLA 458
Query: 544 AVGIALMDSP-VGTTWRPALPLAL 566
A GIAL D P T WRP PL+L
Sbjct: 459 AKGIALEDIPGKDTVWRPCTPLSL 482
>gi|145351377|ref|XP_001420057.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580290|gb|ABO98350.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 497
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/493 (53%), Positives = 340/493 (68%), Gaps = 17/493 (3%)
Query: 82 MSRKRELVKPK--VEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVR 139
M+RK+E+ P+ KV MYVCGVT YD SHIGHARVYV FDVLYR L LGY+V Y R
Sbjct: 1 MTRKKEIFTPRDPAGKKVQMYVCGVTVYDYSHIGHARVYVAFDVLYRQLMRLGYDVTYCR 60
Query: 140 NFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMI 199
NFTD+DDKII R+NE GE +L+ ++ E FH+DM L CL P++EPR ++ + II I
Sbjct: 61 NFTDIDDKIIKRSNESGETCEALTDKFIEAFHEDMAALGCLRPTLEPRATECVDDIIAFI 120
Query: 200 TQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKS 259
+++ G AY +GDVYFSVD P YG LSGR EDNRAGERVAVD RKKNPADFALWK+
Sbjct: 121 ERLIAKGNAYETEGDVYFSVDTLPAYGALSGRNQEDNRAGERVAVDGRKKNPADFALWKT 180
Query: 260 AKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAAC 319
AK GEP W SPWG GRPGWHIECSAM LG + DIHGGG DLVFPHHENE+AQS AAC
Sbjct: 181 AKPGEPTWTSPWGEGRPGWHIECSAMIEKMLGPTIDIHGGGQDLVFPHHENELAQSSAAC 240
Query: 320 N-------NSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
N + YW+HNGFV +DSEKMSKSLGNFFTIR+V++ YHP LR L+G HYR
Sbjct: 241 GCGAHADENPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLDKYHPFVLRFMLLGAHYR 300
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPP-----DTVTSINKFH 427
+PINY+ LE AS+R++Y+YQT+HD L DAAA + + P D + ++
Sbjct: 301 APINYTQRALEEASDRVYYLYQTVHDVRAILR--DAAAEEPAKKPVPLVADALKLASEAE 358
Query: 428 NDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVL 487
+++DD++T V+A LS PLK++ND + T+ GKK R+ +L +L T+ ++ +
Sbjct: 359 KQVSEALNDDMNTPGVIATLSAPLKSMNDFMTTKAGKKAVGRVGALQSLLSTVEGLMEAV 418
Query: 488 GLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGI 547
G+ + +L +LR +AL RA LTED +L +IE+R AR K++ +SD +R +L+A G+
Sbjct: 419 GMPKDEENVILAELRARALHRAGLTEDDLLAKIEERNKARDAKDFAESDRLRDELSARGV 478
Query: 548 ALMDSPVGTTWRP 560
LMD WRP
Sbjct: 479 GLMDGS-AVPWRP 490
>gi|9758060|dbj|BAB08639.1| cysteine-tRNA ligase [Arabidopsis thaliana]
Length = 500
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 279/494 (56%), Positives = 353/494 (71%), Gaps = 12/494 (2%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
+L LYNTM++++E++ P GK+G+YVCG+T YD SHIGHAR V+FDVLYRYL+HL Y+
Sbjct: 7 ELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHLDYD 66
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V +VRNFTDVDDKII RAN+ GEDP+ LS R+C+E+ DM L CLPP+ +PRVS+HM +
Sbjct: 67 VTFVRNFTDVDDKIIDRANKNGEDPLDLSNRFCDEYLVDMGALQCLPPTHQPRVSEHMDN 126
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
II MI +I++ Y V+GDV+FSVDK P YG+LSG+ LE RAGERVAVDSRK+NPADF
Sbjct: 127 IIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDSRKRNPADF 186
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK EP WESPWGPGRPGWHIECSAMS YL FDIHGGG DL FPHHENEIAQ
Sbjct: 187 ALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLKFPHHENEIAQ 246
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
+CAAC +S ++YW+HNG VTI++EKM+KS NF TIR++ YHPLALR FL+ YRSP
Sbjct: 247 TCAACEDSGVNYWLHNGHVTINNEKMAKSKHNFKTIREITASYHPLALRHFLMSAQYRSP 306
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++++ QLES+SE ++ L + ALS + + + D I K +F + M
Sbjct: 307 LSFTASQLESSSEALY----CLSPYQDALSEDGGKSEQTAEGKDI---IKKLKTEFESKM 359
Query: 435 SDDLHTTVVL-AALSDPLKTINDLLHTRKG--KKQAMR-LESLAALEKTIRNVLTVLGLM 490
DDL+T +L A D LK IN L K KKQ M L SL +EK R VL VLGL+
Sbjct: 360 LDDLNTAHILTGAYQDALKFINASLSKLKKMQKKQRMSMLVSLVEIEKAAREVLDVLGLL 419
Query: 491 ST-GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
+T Y+E+L +++ K L RA++ E+ + Q IE+R ARKNK++ KSD IR+ L GIAL
Sbjct: 420 TTLSYAEILKEMKLKTLIRAEIGEEGISQLIEERITARKNKDFAKSDEIREKLTRKGIAL 479
Query: 550 MDSPVGTTWRPALP 563
MD T WRP P
Sbjct: 480 MDIGKETVWRPCFP 493
>gi|255083368|ref|XP_002504670.1| cysteine-trna ligase [Micromonas sp. RCC299]
gi|226519938|gb|ACO65928.1| cysteine-trna ligase [Micromonas sp. RCC299]
Length = 522
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 279/508 (54%), Positives = 347/508 (68%), Gaps = 23/508 (4%)
Query: 76 LWLYNTMSRKRELVKPK--VEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
L L+NTM+R++E P+ KV MYVCGVT YD SHIGHARVYV FDVLYR L +GY
Sbjct: 10 LMLHNTMARRKEPFSPRDSTGKKVNMYVCGVTVYDYSHIGHARVYVAFDVLYRQLTRMGY 69
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
+V Y RNFTDVDDKII RANE GE+ +L R+ FH+D+ L CL P++EPR +DH+
Sbjct: 70 DVTYCRNFTDVDDKIIKRANENGEECDALVDRFIAAFHEDIDALGCLRPTIEPRATDHIK 129
Query: 194 HIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPAD 253
I+ M ++++ G+AY DGDVYFSVD PEYG LSGRK EDNRAGERVAVD RKKNPAD
Sbjct: 130 DIVTMCERLIEKGYAYPADGDVYFSVDALPEYGSLSGRKQEDNRAGERVAVDDRKKNPAD 189
Query: 254 FALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIA 313
FALWK+AK GEP W+SPWG GRPGWHIECSAM + LG S DIHGGG DLVFPHHENE+A
Sbjct: 190 FALWKAAKPGEPTWDSPWGAGRPGWHIECSAMIDSILGKSIDIHGGGQDLVFPHHENELA 249
Query: 314 QSCAAC----------NNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALR 363
QS A+C + YW+HNGFV +DSEKMSKSLGNFFTIR+V E YHP ALR
Sbjct: 250 QSTASCRCCATDGDEPEEPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVTEKYHPFALR 309
Query: 364 LFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSI-----PPD 418
L+GTHYR+PINY+ LE AS+R++Y+YQTL D AL+ +A+A + PP
Sbjct: 310 WMLLGTHYRAPINYTQRALEEASDRLYYLYQTLVDSRVALTEAEASATDAEVKGKPKPPT 369
Query: 419 TVTSIN-----KFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESL 473
V + + ++++DDL+T + +A+LS PLKT+NDL+ T+KGKK R +L
Sbjct: 370 GVAAEGIELAVETKAAVASALTDDLNTPLAMASLSSPLKTLNDLVSTKKGKKAVGRNVAL 429
Query: 474 AALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYE 533
L KT+ L +GL G +L +LR L RA LT+ V + + R AR K++
Sbjct: 430 RDLVKTVEETLEAVGLPHEGGEGLLEELRLLTLARAGLTQADVDEAVAKRAEARAAKDFA 489
Query: 534 KSDAIRKDLAAVGIALMDSPVGTTWRPA 561
+SD IR +L A G+ALMD WRPA
Sbjct: 490 ESDRIRDELGAKGVALMDGG-SQVWRPA 516
>gi|303290903|ref|XP_003064738.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453764|gb|EEH51072.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 479
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/504 (52%), Positives = 335/504 (66%), Gaps = 42/504 (8%)
Query: 82 MSRKRELVKPKV--EGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVR 139
M+RK+E P + KV MYVCGVT YD SHIGHARVYV FDVLYR L LGY+V YVR
Sbjct: 1 MTRKKEPFAPNDPDDKKVSMYVCGVTVYDYSHIGHARVYVAFDVLYRTLTRLGYDVTYVR 60
Query: 140 NFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMI 199
NFTDVDDKII RANE GE+ +L R+ FH+DM L CLPP++EPR + H+ I+ +
Sbjct: 61 NFTDVDDKIIKRANENGEECDALVERFIAAFHEDMSSLGCLPPTMEPRATRHVDDILRVT 120
Query: 200 TQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWK 258
+++ G AY + GDVYFSVD P YG+LSGRKLEDNRAGERVA+D RKKNPADFALWK
Sbjct: 121 EALVEKGHAYPAEGGDVYFSVDSLPTYGKLSGRKLEDNRAGERVAIDERKKNPADFALWK 180
Query: 259 SAKEGEPFWESPWGPGRPGWHIECSAM-SAAYLGHSFDIHGGGMDLVFPHHENEIAQS-- 315
++K GEP W SPWG GRPGWHIECSAM A + G S DIHGGG DLVFPHHENE+AQS
Sbjct: 181 ASKPGEPSWASPWGEGRPGWHIECSAMIDATFGGKSIDIHGGGQDLVFPHHENELAQSTA 240
Query: 316 -CAACNNSH--------ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFL 366
C C+++ + YW+HNGFV +DSEKMSKSLGNFFTIR+V Y ALR L
Sbjct: 241 FCGCCDDAKDAKDAPPFVKYWVHNGFVKVDSEKMSKSLGNFFTIREVTAKYDATALRWML 300
Query: 367 IGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKF 426
+GTHYR+ INY+ LE AS+R++Y+YQTL + +T T++
Sbjct: 301 LGTHYRAAINYTQRALEEASDRLYYLYQTLSEASD----------------ETETAVG-- 342
Query: 427 HNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTV 486
A++SDDL+T + +A+LS PLK +ND + T+KGKK R+ ++ AL + + L
Sbjct: 343 -----AALSDDLNTPLAIASLSSPLKLLNDFVSTKKGKKAQGRIAAMKALVRAVTETLDA 397
Query: 487 LGLMSTGYS--EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAA 544
+GL S +VL +LR L RA L+ + V + R AR+ K++ +SD IR +L A
Sbjct: 398 VGLPSAKADAVDVLERLRALTLTRAGLSREDVDAAVAARKAAREAKDFAESDRIRDELGA 457
Query: 545 VGIALMDSPVGTTWRPALPLALQE 568
G+ALMD WRP+ P+ +E
Sbjct: 458 KGVALMDGG-SQVWRPS-PVVAEE 479
>gi|15228880|ref|NP_191189.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|7572928|emb|CAB87429.1| cysteine-tRNA ligase [Arabidopsis thaliana]
gi|332645985|gb|AEE79506.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 489
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/500 (52%), Positives = 331/500 (66%), Gaps = 62/500 (12%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNTM++ +E+ KP GK+G+YVCG+T YD SHIGHAR V+FD+LYRYLRHLGY+V
Sbjct: 11 LTLYNTMTQLKEVYKPMNPGKIGIYVCGITAYDYSHIGHARAAVSFDLLYRYLRHLGYQV 70
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRNFTDVDDK A GE P+ LS R+CEE+ DM L CL P+ +PRVSDHM I
Sbjct: 71 TYVRNFTDVDDK----AKNCGEKPLDLSNRFCEEYLLDMAALQCLLPTHQPRVSDHMEQI 126
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I MI +I++NG Y V GDV+FSVDK P YGQLSG++L+ +AG+RVAVDSRK+NPADFA
Sbjct: 127 IKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAVDSRKRNPADFA 186
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
L K+AK GEP WESPWG GRPGWHIE FDIHGGG DL FPHHENEIAQ+
Sbjct: 187 LRKAAKSGEPSWESPWGHGRPGWHIE------------FDIHGGGADLKFPHHENEIAQT 234
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
CAAC +S ++YW+HNG VT ++ KM KSL NFFTIRQ+ YHPLALR FL+ YRSP+
Sbjct: 235 CAACEDSGVNYWLHNGHVTNNNVKMGKSLNNFFTIRQIAANYHPLALRHFLMSAQYRSPL 294
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
NYSV QLES+S+ ++ S+ P + MS
Sbjct: 295 NYSVSQLESSSDALY-----------------------SLSP------------YREEMS 319
Query: 436 DDLHTTVVLAALSDPLKTINDLLH---------TRKGKKQAMRL-ESLAALEKTIRNVLT 485
D+ T A + +K + + L + KKQ M L SL +EK +R VL
Sbjct: 320 GDVGKTQQSAEAKEMIKKVKNALKFINVSISKLKKMQKKQRMSLVVSLVEVEKAVREVLD 379
Query: 486 VLGLMST-GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAA 544
VLGL++T Y E+L +++KAL RA + E++VLQRIE+R +ARK+K++ +SD IR+ LA
Sbjct: 380 VLGLLTTLSYGELLKDMKQKALTRAGMGEEEVLQRIEERNMARKSKDFRRSDRIRELLAF 439
Query: 545 VGIALMDSPVGTTWRPALPL 564
GI L D P T WRP+ PL
Sbjct: 440 KGIFLEDVPGDTVWRPSTPL 459
>gi|189423475|ref|YP_001950652.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
gi|229558717|sp|B3E1P0.1|SYC_GEOLS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189419734|gb|ACD94132.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
Length = 487
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/484 (49%), Positives = 317/484 (65%), Gaps = 1/484 (0%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT+S ++E P+V GKVGMYVCGVT YD HIGHAR + FD++YRYLR GY+V
Sbjct: 3 LRLYNTLSGEKEPFVPRVAGKVGMYVCGVTVYDFCHIGHARAGIVFDMIYRYLRFSGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y+RN+TD+DDKII RAN+ G D +++ RY F +DM L L P++EP+ +DH+ I
Sbjct: 63 TYIRNYTDIDDKIINRANQEGTDYRTIADRYIATFDEDMDRLGMLRPTIEPKATDHIEDI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I +I +++DNG AY VDGDVYF+V+ FP Y +LSGR L+D AG RV VD RK+NP DFA
Sbjct: 123 ISIIQRLIDNGHAYAVDGDVYFAVETFPAYLKLSGRNLDDMLAGARVDVDERKRNPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK +K GEP+WESPWG GRPGWHIECSAMS +LG SFDIHGGG DLVFPHHENEIAQS
Sbjct: 183 LWKGSKPGEPWWESPWGKGRPGWHIECSAMSMRFLGPSFDIHGGGKDLVFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A + YW+HNGFV I+SEKMSKSLGNFFTIR+V+EL+ P LR F++ HYRSP+
Sbjct: 243 EGANGCQFVKYWLHNGFVNINSEKMSKSLGNFFTIREVLELFDPETLRFFILQAHYRSPL 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
+YS L A + IY+ L ++AL A + + + F +M
Sbjct: 303 DYSDQNLREAQAGLSRIYEALAALDQALEKPATAIHLPASAAEFAEKVAGLLPRFREAMD 362
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T L L D ++T+N LL G A R + L L + + VLGL S
Sbjct: 363 DDFNTAQALGTLFDSIRTLNRLLAEGGGSSSASRAD-LEQLRAAVTEIGAVLGLFRIKPS 421
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
+ L + + +++ +++ I +R ARKNK++++SD IR L + I L+D+P G
Sbjct: 422 DWLAAREAEKARHLEISPEEIEGLIVERAAARKNKDFKRSDEIRDYLLSRDIQLVDTPQG 481
Query: 556 TTWR 559
T W+
Sbjct: 482 TAWK 485
>gi|108706133|gb|ABF93928.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
Length = 338
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/327 (69%), Positives = 266/327 (81%)
Query: 70 ASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLR 129
A + QL L+N+M++K+EL +P VEGKV MYVCGVTPYD SHIGHAR YV FDVLYRYL+
Sbjct: 5 AKPTPQLELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLK 64
Query: 130 HLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVS 189
LGYEV YVRNFTD+DDKII RANE GE SLS R+ EF DM L CLPP+ EPRV+
Sbjct: 65 FLGYEVEYVRNFTDIDDKIIKRANEAGETVTSLSSRFINEFLLDMAQLQCLPPTCEPRVT 124
Query: 190 DHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKK 249
DH+ HII++IT+I++NG AY ++GDVYFSVD FPEY LSGRKL+ N AG RVAVD+RK+
Sbjct: 125 DHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKLDHNLAGSRVAVDTRKR 184
Query: 250 NPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHE 309
NPADFALWK+AKEGEPFW+SPWG GRPGWHIECSAMSA YLGH FDIHGGG DL+FPHHE
Sbjct: 185 NPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHE 244
Query: 310 NEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGT 369
NE+AQS AA S + W+HNGFV D +KMSKS NFFTIR +++LYHP+ALR FL+ T
Sbjct: 245 NELAQSRAAYPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDIIDLYHPMALRFFLMRT 304
Query: 370 HYRSPINYSVVQLESASERIFYIYQTL 396
HYR +N+S LE AS+R++YIYQ L
Sbjct: 305 HYRGDVNHSDKALEIASDRVYYIYQVL 331
>gi|337286143|ref|YP_004625616.1| cysteinyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
gi|335358971|gb|AEH44652.1| cysteinyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
Length = 498
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/484 (48%), Positives = 326/484 (67%), Gaps = 8/484 (1%)
Query: 80 NTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVR 139
NT++RK+E+ +P +V MY CGVT YD SH+GHAR V FDVL+R+L+ LG+EV YVR
Sbjct: 10 NTLTRKKEVFEPLSPPRVTMYACGVTAYDESHLGHARAAVVFDVLFRFLKFLGFEVIYVR 69
Query: 140 NFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMI 199
N+TD+DDKII RA E+G P L+ RY + + +DM L L P+ EP+ ++H+P II +I
Sbjct: 70 NYTDIDDKIIKRAYEVGVSPKELAERYIKSYDEDMKALKVLRPTYEPKATEHIPQIIALI 129
Query: 200 TQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKS 259
++ GFAY DGDVYFSV+KFPEYG+LSGR LE+ +AG R+AV +K++P DFALWK+
Sbjct: 130 ETLIKKGFAYVADGDVYFSVEKFPEYGKLSGRNLEELKAGARIAVSEKKRHPLDFALWKA 189
Query: 260 AKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAAC 319
K GEP W+SPWG GRPGWHIECSAM+ YLG + DIHGGG+DL+FPHHENEIAQS AA
Sbjct: 190 EKPGEPSWDSPWGRGRPGWHIECSAMAMYYLGETIDIHGGGLDLIFPHHENEIAQSEAAT 249
Query: 320 NNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYSV 379
+ YW+HNG VT+ EKMSKSLGNF TI+Q++ +HP A+RLFL+ HYRSP++Y+
Sbjct: 250 GKPFVRYWLHNGMVTVGREKMSKSLGNFVTIKQMLSRHHPEAIRLFLLSMHYRSPLDYTE 309
Query: 380 VQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVT-SINKFHNDFLASMSDDL 438
+ + + +Y+TL+ EK + A ++ +I F NDF+++++DDL
Sbjct: 310 KVVSDHEKALEGLYETLYLIEKLRPSSEKAPENQQKNLAKISETIKNFENDFISALADDL 369
Query: 439 HTTVVLAALSDPLKTINDLLH--TRKGKKQAMRLESLAALEKTIRNVL--TVLGLMSTGY 494
+T + +L K +N+LL RK + ++ LA KT+ L ++LG++
Sbjct: 370 NTARAIGSLFSLEKALNNLLKLCARKVAEDHLK---LAKKGKTLATKLAGSLLGILEESP 426
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ + R +AL L D++ + I++R ARK K +EK+DAIR DLA GI + D+P
Sbjct: 427 EAFIERKRSQALLAKGLDRDEIERLIKEREEARKAKNFEKADAIRDDLAQKGIIIRDTPW 486
Query: 555 GTTW 558
GT W
Sbjct: 487 GTFW 490
>gi|108706129|gb|ABF93924.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|108706132|gb|ABF93927.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
Length = 420
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/417 (55%), Positives = 296/417 (70%), Gaps = 27/417 (6%)
Query: 174 MVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKL 233
M L CLPP+ EPRV+DH+ HII++IT+I++NG AY ++GDVYFSVD FPEY LSGRKL
Sbjct: 1 MAQLQCLPPTCEPRVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKL 60
Query: 234 EDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHS 293
+ N AG RVAVD+RK+NPADFALWK+AKEGEPFW+SPWG GRPGWHIECSAMSA YLGH
Sbjct: 61 DHNLAGSRVAVDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHV 120
Query: 294 FDIHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQV 353
FDIHGGG DL+FPHHENE+AQS AA S + W+HNGFV D +KMSKS NFFTIR +
Sbjct: 121 FDIHGGGKDLIFPHHENELAQSRAAYPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDI 180
Query: 354 MELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKD 413
++LYHP+ALR FL+ THYR +N+S LE AS+R++YIYQTL+DCE+ LS +
Sbjct: 181 IDLYHPMALRFFLMRTHYRGDVNHSDKALEIASDRVYYIYQTLYDCEEVLSQYRGENISV 240
Query: 414 SIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMR---- 469
+P + +NK H++FL SM+DDL TT VL +D LK IN L+ K +Q +
Sbjct: 241 PVPVEEQDMVNKHHSEFLESMADDLRTTDVLDGFTDLLKAINSNLNDFKKLQQKLEQQKK 300
Query: 470 ----------------------LESLAALEKTIRNVLTVLGLM-STGYSEVLLQLREKAL 506
++++ ALE I+N +++LGLM + +E L QL++KAL
Sbjct: 301 KQQQQKQQKQKQQQAQKQPEEYIQAMFALETEIKNKISILGLMPPSSLAEALKQLKDKAL 360
Query: 507 KRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPALP 563
KRA LTE+ + ++IE RT ARKNK+++ SD IRK L + GIALMD P GT WRP P
Sbjct: 361 KRAGLTEELLQEQIEQRTAARKNKQFDVSDQIRKQLGSKGIALMDEPTGTVWRPCEP 417
>gi|224369425|ref|YP_002603589.1| protein CysS2 [Desulfobacterium autotrophicum HRM2]
gi|223692142|gb|ACN15425.1| CysS2 [Desulfobacterium autotrophicum HRM2]
Length = 477
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/485 (47%), Positives = 314/485 (64%), Gaps = 13/485 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT +R +E P + KV MYVCG T YD SHIGHAR V FDV++R+LRH GY+V
Sbjct: 3 LRIYNTQTRTKETFIPLEKNKVKMYVCGPTVYDTSHIGHARSVVVFDVVFRWLRHSGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
CYVRNFTDVDDKII RANELG+DP +S RY +EFH +M L+ L P++EP+ ++H+ I
Sbjct: 63 CYVRNFTDVDDKIINRANELGQDPKEISERYIKEFHNEMDALNVLRPTIEPKATEHIQDI 122
Query: 196 IDMITQILDNGFAYRVDG-DVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID I +++D G AY V G DV+FS+ F EYG+LSGR +D G R+AVD +K++P DF
Sbjct: 123 IDFIQRLIDKGKAYHVPGSDVFFSIQSFDEYGKLSGRNPDDMMPGSRIAVDDKKRDPKDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP W SPWG GRPGWHIECSAMS YLG SFDIHGGG DL+FPHHENEIAQ
Sbjct: 183 TLWKPVKPGEPSWPSPWGDGRPGWHIECSAMSYKYLGESFDIHGGGKDLIFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + YWIHNGFV I++EKMSKSLGNF I+ V++ YHP +R+FL+ HYRSP
Sbjct: 243 SEAAFGKTFVRYWIHNGFVDINNEKMSKSLGNFTMIKDVLKDYHPEVMRMFLLSKHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
I+Y+ ++ + +Y + + A A + + P K F A+M
Sbjct: 303 IDYNDTSMDEVISGLDRLYAFVERAQG------AGATVNGVEP------GKEWASFEAAM 350
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L D +KT N +L + L +++ L ++ + ++LG+++
Sbjct: 351 DDDFNTARAMATLFDTVKTGNRILDQQGETVSPETLSAVSTLCADLKRMGSILGILAQEP 410
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ +E L DL D + + I++R AR++K + ++D IR +L A+ I L D P
Sbjct: 411 QDYFRAKKESGLAGKDLDGDAIERLIQERVAARQSKNFARADEIRAELDAMNIVLEDGPD 470
Query: 555 GTTWR 559
GTTW+
Sbjct: 471 GTTWK 475
>gi|95929121|ref|ZP_01311866.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
gi|95135022|gb|EAT16676.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
Length = 481
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/486 (47%), Positives = 317/486 (65%), Gaps = 11/486 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S +EL +P+V GKVGMYVCGVT YD HIGHAR + FD++YRYL++ Y+V
Sbjct: 3 LRVYNTLSGNKELFEPRVPGKVGMYVCGVTVYDYCHIGHARANIVFDIVYRYLKYSDYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN+TDVDDKII RANE G LS + + F +DM L P+V+P+ ++H+ HI
Sbjct: 63 TYVRNYTDVDDKIINRANERGITSQQLSEEFIQAFDEDMARLGLDLPTVQPKATEHIDHI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I ++ +++ NG AY DGDVYF+V+ F Y +LS R L++ +AG R+A +K+NP DFA
Sbjct: 123 IALVERLIANGKAYASDGDVYFAVESFDSYLKLSKRNLDEMQAGARIAPGEKKRNPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+AK GEP WESPWG GRPGWHIECSAM YLG SFDIHGGG DLVFPHHENEIAQS
Sbjct: 183 LWKAAKPGEPSWESPWGKGRPGWHIECSAMGMEYLGESFDIHGGGKDLVFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA + YW+HNGFV ++ EKMSKSLGNFFTIR +++ Y P +R F++ HYRSPI
Sbjct: 243 EAATGQPFVKYWLHNGFVNVNQEKMSKSLGNFFTIRDILKTYDPEVVRFFILSAHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSIN--KFHNDFLAS 433
++S L+ A + Y+ L + L+ PP V + + + F +
Sbjct: 303 DFSDQNLKEARLGLSRFYEGLQAAAEVLA---------ECPPSDVEATDGAELTAKFREA 353
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T + L + ++T+N L+ T+K +K+A + S+ +L T + VLG+ +
Sbjct: 354 MDDDFNTAQAIGYLFEGIRTMNRLMATKKFRKKADLVASVRSLYDTFLELGKVLGMFGSE 413
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L Q R AL D+T +++ I +R AR++K++ +SDAIR +LA GI L+D
Sbjct: 414 PKAWLNQQRLSALADLDITVEEIDALIAERLQARQDKDFARSDAIRDELAEKGILLLDGA 473
Query: 554 VGTTWR 559
GT W+
Sbjct: 474 GGTDWK 479
>gi|118578479|ref|YP_899729.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
gi|171704442|sp|A1AK01.1|SYC_PELPD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118501189|gb|ABK97671.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
Length = 493
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/489 (48%), Positives = 305/489 (62%), Gaps = 7/489 (1%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++ +++ P GK GMYVCGVT YD HIGHAR V FDV+YRYL + GY V
Sbjct: 3 LRIYNTLTGEKDTFVPLHPGKAGMYVCGVTVYDYCHIGHARANVVFDVIYRYLGYSGYAV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRNFTD+DDKII RAN+ G D ++S RY E F+QDM L P+VEP+ +DHM I
Sbjct: 63 TYVRNFTDIDDKIINRANQEGVDYTTISERYIEAFNQDMARLGLAKPTVEPKATDHMGGI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I +I ++ G AY DGDVY++V+ FP Y +LSGR LED AG RV VD RK+NP DFA
Sbjct: 123 ISVIETLIAKGHAYESDGDVYYAVESFPSYLRLSGRNLEDMLAGARVEVDDRKRNPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK +K GEP W+SPWG GRPGWHIECSAMS YLG +FDIHGGG DLVFPHHENEIAQS
Sbjct: 183 LWKGSKPGEPSWDSPWGAGRPGWHIECSAMSMEYLGKTFDIHGGGKDLVFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA + YW+HNGFV I+SEKMSKSLGNFFTIR+V+E Y P LR F++ HYRSPI
Sbjct: 243 EAANGCQFVRYWMHNGFVNINSEKMSKSLGNFFTIREVLEQYDPETLRFFILSAHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDA---AALKDSIPPDTVTSINKFH---ND 429
++S L A + IY L + A+ D +PP K +
Sbjct: 303 DFSDQNLNDAQAGLERIYSCLAAVDGAMEGQDVPNQPVEGAPLPPAGAELHEKLQSLISR 362
Query: 430 FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGL 489
F +M DD +T L L + ++ N + G + L L + + VLGL
Sbjct: 363 FREAMDDDFNTAQALGVLFEAVRATNRFM-AESGDQTPATLALLGQVRRLFAETGDVLGL 421
Query: 490 MSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
++ + L +++ + +++ ++ Q I +R AR N+++++ D IR L GI L
Sbjct: 422 FTSQPAAWLESIKQAKSDQMEISPQEIEQLIAERAAARTNRDFKRGDEIRDLLLQKGIQL 481
Query: 550 MDSPVGTTW 558
+DSP GTTW
Sbjct: 482 LDSPQGTTW 490
>gi|404494911|ref|YP_006719017.1| cysteinyl-tRNA ligase [Geobacter metallireducens GS-15]
gi|418067565|ref|ZP_12704904.1| cysteinyl-tRNA synthetase [Geobacter metallireducens RCH3]
gi|109894903|sp|Q39ZL8.1|SYC_GEOMG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78192539|gb|ABB30306.1| cysteinyl-tRNA synthetase [Geobacter metallireducens GS-15]
gi|373558563|gb|EHP84899.1| cysteinyl-tRNA synthetase [Geobacter metallireducens RCH3]
Length = 485
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/484 (48%), Positives = 312/484 (64%), Gaps = 3/484 (0%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S +E P V G+V MYVCGVT YD HIGHAR V FD++YRYLRH GY+V
Sbjct: 3 LRVYNTLSGTKEEFTPLVPGRVSMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN+TDVDDKII RAN+ G ++S R+ EF +DM L P+ +P+ ++H+ +
Sbjct: 63 TYVRNYTDVDDKIINRANQEGVPYNAISERFIAEFDRDMAALGLDLPTHQPKATEHIAEM 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
ID+I+++++ GFAY DGDVYF V+KF Y +LS R L++ +AG R+ V +K++P DFA
Sbjct: 123 IDVISRLIEKGFAYAADGDVYFCVEKFDPYLKLSKRNLDEMQAGARIEVGEKKRHPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK +K GEPFWESPWG GRPGWHIECSAMS YLG +FDIHGGG DLVFPHHENEIAQS
Sbjct: 183 LWKGSKPGEPFWESPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA YWIHNGFV I+SEKMSKSLGNFFTI++V+E Y LR FL+ HYRSPI
Sbjct: 243 EAANGKPFAHYWIHNGFVNINSEKMSKSLGNFFTIKEVLEKYDAEVLRFFLLSAHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
++S L A + IY TL ++ L+ A + + F F +M
Sbjct: 303 DFSDQNLREAEAGLERIYGTLAGIDENLT-KGAEGTAEETDRELAEKAVTFPERFREAMD 361
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T L + D +++ N +L KG L LA IR V VLG+ ++
Sbjct: 362 DDFNTAQALGFVFDLVRSANRVLGEGKGGGSNRAL--LAEARDRIRKVGAVLGIFTSEPR 419
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
+L+ + +T +++ + I +R AR N++++++D IR LAA GI L+DSP G
Sbjct: 420 AFAERLKNRKAAELPITAEEIERLIAERIAARANRDFKRADEIRDSLAAKGIMLLDSPQG 479
Query: 556 TTWR 559
TTW+
Sbjct: 480 TTWK 483
>gi|404491639|ref|YP_006715745.1| cysteinyl-tRNA ligase [Pelobacter carbinolicus DSM 2380]
gi|109894916|sp|Q3A8C9.1|SYC_PELCD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|77543801|gb|ABA87363.1| cysteinyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
Length = 481
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/486 (47%), Positives = 312/486 (64%), Gaps = 11/486 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNTM+ ++E +P GKVGMYVCGVT YD HIGHAR V FD++YRYL+ +G++V
Sbjct: 3 LRVYNTMTGRKEEFEPLQPGKVGMYVCGVTVYDYCHIGHARANVVFDIIYRYLQFIGFDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN+TDVDDKII RANE G +L+ + + F +DM L P+++P+ + H+ HI
Sbjct: 63 TYVRNYTDVDDKIIKRANERGISSDTLAGEFIQAFDEDMNRLGLAEPTIQPKATCHIDHI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
++++ +++D G AY GDVYFSV+ FP Y +LS R +++ R+G R+ +K+NP DFA
Sbjct: 123 VNLVQRLIDRGIAYESQGDVYFSVEDFPSYLKLSKRNMDEMRSGARITPGEQKRNPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+AK GEP WESPWGPGRPGWHIECSAMS YLG SFDIHGGG DLVFPHHENEIAQS
Sbjct: 183 LWKAAKPGEPSWESPWGPGRPGWHIECSAMSMEYLGESFDIHGGGKDLVFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A + YW+HNGFV ++ EKMSKSLGNFFTIR +++ Y P LR F++ HYRSPI
Sbjct: 243 EGATGKPFVKYWLHNGFVNVNQEKMSKSLGNFFTIRDILQTYDPEVLRFFILTAHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSI--NKFHNDFLAS 433
++S L+ A + Y+ LH + L+ + PP VTS N F +
Sbjct: 303 DFSDQNLQDARLGLSRFYEGLHAASEVLA---------ACPPGDVTSEAGATLENVFREA 353
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T + L D ++TIN L+ + +K ++ + AL + + VLGL +
Sbjct: 354 MDDDFNTAAAIGHLFDAVRTINRLITEKGFRKNREKVAQVRALYDALLKLGGVLGLFVSD 413
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L Q+ L TE + I R ARKNK++ ++D IR +LAA GI L+D P
Sbjct: 414 PAAWLKQMNLAMLATTGYTESDIEDFIRQRQEARKNKDFARADEIRDELAAKGIQLLDGP 473
Query: 554 VGTTWR 559
GT W+
Sbjct: 474 QGTAWK 479
>gi|301059000|ref|ZP_07199966.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
gi|300446881|gb|EFK10680.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
Length = 484
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/488 (48%), Positives = 307/488 (62%), Gaps = 13/488 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN+ RK+E+ KP +GKVG+YVCGVT YDL HIGHAR + FDVL RY R GY+V
Sbjct: 3 LKLYNSSIRKKEVFKPLNDGKVGLYVCGVTVYDLCHIGHARSTIVFDVLARYFRARGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRNFTD+DDKII RA L + P L+R + + F++DM L L VEPR +D++ +
Sbjct: 63 TYVRNFTDIDDKIIERAKLLKKAPKELAREFIDAFYEDMGKLGVLKADVEPRATDYVEDM 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I+M ++D G+AY GDVYFSVD +P YG LSGR LED RAG RVAVD RK++P DF
Sbjct: 123 IEMTQTLMDRGYAYTEGGDVYFSVDSYPGYGSLSGRNLEDMRAGSRVAVDDRKRHPMDFV 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWKSAK GEP W SPWGPGRPGWH+ECS MS +LG +FDIHGGG DL+FPHHENE AQS
Sbjct: 183 LWKSAKPGEPQWPSPWGPGRPGWHLECSVMSNRHLGPTFDIHGGGRDLLFPHHENERAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A + YW+HNGFVT++SEKMSKSLGNF TIR ++ YHP LRLFL+ HYRSP+
Sbjct: 243 MCANDGEFARYWVHNGFVTVESEKMSKSLGNFLTIRDALKKYHPEVLRLFLLSKHYRSPL 302
Query: 376 NYS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
++S V L+S RI+ + Q L+D LL + + + +F+ F
Sbjct: 303 DFSAKDVANLQSGLVRIYRMLQRLND------LLGPGDGEKTSEDSLSGASGEFYEKFCE 356
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLH-TRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
M DDL+T L + D ++ +N L+ G L SL + + +LGL
Sbjct: 357 MMDDDLNTAGALGLVFDKVREMNRLMDPDGNGAVSEKALSSLKSQRDQLLRAGEILGLFQ 416
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+E QL A D+ D++ ++ R+ AR K++ SD IR L +G+ L D
Sbjct: 417 QNPAEFFEQL---ASPSKDVNTDEIEALVKKRSQARVAKDWALSDTIRDQLKEMGVVLED 473
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 474 GPQGTTWR 481
>gi|51246780|ref|YP_066664.1| cysteinyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
gi|61216190|sp|Q6AJ23.1|SYC_DESPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|50877817|emb|CAG37657.1| probable cysteinyl-tRNA synthetase [Desulfotalea psychrophila
LSv54]
Length = 489
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/481 (46%), Positives = 312/481 (64%), Gaps = 2/481 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+S K+E ++P V +YVCG+T YD HIGHAR + FD++ RYLR+L Y+V +
Sbjct: 5 VYNTLSGKKEPLQPIEPNHVKLYVCGITSYDYCHIGHARSALAFDMIVRYLRYLDYKVTF 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTD+DDKIIARANE G +L+ R+ +EFH DM +L L P +EP+ ++H+ +ID
Sbjct: 65 VRNFTDIDDKIIARANETGVTAQALAERFIDEFHTDMDNLGTLRPDIEPKATEHIQEMID 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++D AY GDVY+ V+ FPEYG+LSGR +ED +AG R++++ +K+NP DFALW
Sbjct: 125 IIQELVDKDMAYPSAGDVYYVVNSFPEYGKLSGRNIEDMQAGARISINEQKRNPMDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K++K GEP WESPWGPGRPGWHIECSAMS YLG +FDIHGGG DL+FPHHENEIAQS
Sbjct: 185 KASKPGEPSWESPWGPGRPGWHIECSAMSRKYLGENFDIHGGGKDLIFPHHENEIAQSEG 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A + WIH+GFVTI EKMSKSLGNF TI+ +++ YHP LR F+ T YR+P+++
Sbjct: 245 ANGKPFANTWIHHGFVTIKDEKMSKSLGNFLTIKDILDHYHPEILRAFIFSTQYRNPLDF 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S + ++ A + +Y+ LHD ++ L+ D L I +N F +M++D
Sbjct: 305 SEIAMQDAETALVRLYECLHDIQQ-LAKGD-PTLPALISAKDAAKLNSIETRFQEAMNND 362
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T + L L D +K IN A+ ++ L I+ + ++GL+ +
Sbjct: 363 FNTALALGVLYDAIKIINRAQRALTDTPSALDVKMLKGSMTLIQKLAGIVGLLQEDANLF 422
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
L Q +EK L D+TE ++ I+ R AR NK++ +SD IR L GI L D GT
Sbjct: 423 LQQRKEKMLSGIDITEAEIESYIQQRLDARANKDWARSDEIRDILLEKGITLKDGADGTG 482
Query: 558 W 558
W
Sbjct: 483 W 483
>gi|85858183|ref|YP_460385.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
gi|85721274|gb|ABC76217.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
Length = 550
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/492 (46%), Positives = 316/492 (64%), Gaps = 10/492 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT++ K+E+ P EG+VG+YVCG+T YD+ H+GHAR V FDVL RYL + GYEV
Sbjct: 59 LKLYNTLNNKKEVFTPIREGRVGLYVCGITVYDVCHVGHARSAVVFDVLKRYLEYRGYEV 118
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y++NFTDVDDKIIARAN G ++ RY +DM L L P+V PR ++H+ +
Sbjct: 119 TYIKNFTDVDDKIIARANAEGVSISEIANRYIASHDKDMDRLGVLRPTVTPRATEHIGEM 178
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I++I+++ G AY VDG+VY++V++FP YG+LSGRKLED AG R+ V+ K NP DFA
Sbjct: 179 IELISKLQKRGLAYAVDGNVYYAVERFPGYGKLSGRKLEDMMAGARIDVNEHKNNPMDFA 238
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK++K EP W+SPWGPGRPGWHIECS MS YLG +FDIHGGG DLVFPHHENEIAQS
Sbjct: 239 LWKASKPNEPAWDSPWGPGRPGWHIECSVMSQKYLGDTFDIHGGGEDLVFPHHENEIAQS 298
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
+ WIHNGFV I+SEKMSKSLGN FTI++++ YH +RLF++ +HYRS +
Sbjct: 299 EGVTGKPLANIWIHNGFVKINSEKMSKSLGNVFTIQEMLTRYHAEVIRLFMLQSHYRSAV 358
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTS--------INKFH 427
++S L A + + Y TL ++ L++ + A I P+T+T +
Sbjct: 359 DFSEESLSEARQGMDRFYGTLKAIQEVLAVAEEEA--SPISPETLTGKTAELYAHVQGLP 416
Query: 428 NDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVL 487
+ F+ +M DDL+T + L D + IN + K K + LA K+I+++ VL
Sbjct: 417 DRFVEAMDDDLNTARAIGYLFDAARQINGFIRDAKMAKSKEGWKVLALAGKSIKDLGYVL 476
Query: 488 GLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGI 547
GL LQ RE+ +++ L ++ I DR AR +K++ K+D IR+ L GI
Sbjct: 477 GLFQENPDVYFLQDREREIRKRGLEPAEIELLIADRWAARNDKDWHKADEIRQLLTEKGI 536
Query: 548 ALMDSPVGTTWR 559
L D+P GTTW+
Sbjct: 537 VLKDTPTGTTWK 548
>gi|408418553|ref|YP_006759967.1| cysteinyl-tRNA synthetase CysS [Desulfobacula toluolica Tol2]
gi|405105766|emb|CCK79263.1| CysS: cysteinyl-tRNA synthetase [Desulfobacula toluolica Tol2]
Length = 487
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/485 (48%), Positives = 309/485 (63%), Gaps = 3/485 (0%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ ++E P EGKV MYVCG T YD SHIGHAR V FD + R+L+ L YEV
Sbjct: 3 LKVYNTLHGRKEEFVPLNEGKVKMYVCGPTVYDTSHIGHARSVVVFDTILRWLQELEYEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRNFTDVDDKII ++NE GE +++ +Y +EFH +M L+ L P+VEP+ ++H+ HI
Sbjct: 63 TYVRNFTDVDDKIIKKSNETGEACSAITEKYIDEFHNEMDALNVLRPTVEPKATEHIRHI 122
Query: 196 IDMITQILDNGFAYRVDG-DVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID I ++D G AY V+G DVYFS+D F EYG+LSGR +D RAG R+AVD +KK+P DF
Sbjct: 123 IDFIQMLIDKGKAYPVEGGDVYFSIDSFKEYGKLSGRNPDDMRAGARIAVDDKKKSPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
+LWK AK GEP WESPWG GRPGWHIECSAMS YLG FDIHGGG DL+FPHHENE+AQ
Sbjct: 183 SLWKPAKPGEPCWESPWGKGRPGWHIECSAMSYEYLGEGFDIHGGGKDLIFPHHENELAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + YWIHNGFV I++EKMSKSLGNF I++V++ Y P +R+FL+ HYRSP
Sbjct: 243 SEAVFGRQFVKYWIHNGFVDINNEKMSKSLGNFTMIKEVLDTYSPEVIRMFLLSNHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
I+YS + S + IY L E A L + L S + + NDF A+M
Sbjct: 303 IDYSEDSMREVSMGLDRIYAFLERLENAGVSLYESQLDGSRIDGSRKG--ELWNDFCAAM 360
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD ++ +A + + +K N LL A LE+L I + VLG+
Sbjct: 361 NDDFNSAKAIACVFEAVKKGNRLLDDANDSPGADLLETLNLFYNDIHAISNVLGIFLLDS 420
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+EK + + Q+ I++R ARKNK++ ++D IR L ++ + L D P
Sbjct: 421 KSYFKAKKEKGMADMAIDPAQIEAFIQERVDARKNKDFARADEIRDHLQSINVVLEDGPQ 480
Query: 555 GTTWR 559
GTTWR
Sbjct: 481 GTTWR 485
>gi|320354379|ref|YP_004195718.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
gi|320122881|gb|ADW18427.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
Length = 487
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/483 (48%), Positives = 306/483 (63%), Gaps = 6/483 (1%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+SR++E+++P EG V +YVCG+T YD HIGHAR + FD++ RYLRH GY+V +
Sbjct: 5 IYNTLSRRKEILQPLEEGHVKLYVCGITSYDYCHIGHARSALVFDMVVRYLRHRGYKVTF 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTD+DDKII RANE G D SL+ R+ EF+ DM L L P +EP+ ++H+P +I
Sbjct: 65 VRNFTDIDDKIINRANEQGIDSASLALRFINEFYTDMDALGTLRPDLEPKATEHIPEMIG 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I ++D G AY DGDVYF V++F YGQLSGR L D +AG RV V+ +K++P DF LW
Sbjct: 125 LIEDLIDKGMAYPADGDVYFRVERFVGYGQLSGRGLADMQAGARVEVNDKKEHPMDFVLW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK GEP W SPWG GRPGWHIECSAMS YLG +FDIHGGG DLVFPHHENEIAQSC
Sbjct: 185 KAAKPGEPKWPSPWGEGRPGWHIECSAMSRKYLGETFDIHGGGKDLVFPHHENEIAQSCG 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A + W+H+GFVTI EKMSKSLGNF TIR V++ Y P LRLF+ T YR+P+++
Sbjct: 245 ASGKPFANLWMHHGFVTIKEEKMSKSLGNFLTIRDVLKQYEPEVLRLFIFSTQYRNPLDF 304
Query: 378 SVVQLESASERIFYIYQTLHDCEK--ALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
+ L A + +Y+ L E A A+ + D + +++FH +M
Sbjct: 305 TETALHDARAGLERMYECLAQVEDLPAEGTEGASVITDKDRTALASLVDRFHQ----AMD 360
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
+D +T LA L D +K +N +L T + A L L R + VLGL+ +
Sbjct: 361 NDFNTAQALAHLFDTVKLLNKVLRTLPERPAAADLNLLRTTAAEFRELAGVLGLVQRNPA 420
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
EV+ R K L DL E+ + I R AR K++ SD +R L I L DSP G
Sbjct: 421 EVVAGNRAKILAGIDLDEETINGLITKRNQARAAKDWSTSDEVRDYLLEHRIVLKDSPEG 480
Query: 556 TTW 558
TTW
Sbjct: 481 TTW 483
>gi|242036957|ref|XP_002465873.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
gi|241919727|gb|EER92871.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
Length = 466
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/430 (56%), Positives = 302/430 (70%), Gaps = 29/430 (6%)
Query: 174 MVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKL 233
M L CLPP+ EPRV++H+ HII++IT+I+ NG Y ++GDVYFSVD FPEY LSGRKL
Sbjct: 1 MAALQCLPPTREPRVTEHIEHIIELITKIIQNGHGYAIEGDVYFSVDSFPEYLLLSGRKL 60
Query: 234 EDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHS 293
+ NRAGERVAVD+RK+NPADFALWKSAKEGEP WESPWG GRPGWHIECSAMSA YLGH
Sbjct: 61 DQNRAGERVAVDTRKRNPADFALWKSAKEGEPSWESPWGHGRPGWHIECSAMSAHYLGHV 120
Query: 294 FDIHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQV 353
FDIHGGG DL+FPHHENE+AQS AA S + W+HNGFV D +KMSKS NFFTIR +
Sbjct: 121 FDIHGGGRDLIFPHHENELAQSRAAYPESEVICWMHNGFVNKDDQKMSKSENNFFTIRDI 180
Query: 354 MELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKD 413
+ LYHP+ALR FLI THYRS +N+S +E AS+R++YIY+TL+DCE+ LS +
Sbjct: 181 ISLYHPMALRYFLIRTHYRSDVNHSDKAIEKASDRVYYIYKTLYDCEEMLSKYHEEGISV 240
Query: 414 SIPPDTVTSINKFHNDFLASMSDDLHTTVVL---AALSDPLKTINDLLHTRKGKKQAMR- 469
+P + +N+ FL +MSDDL TT VL L+D LK IN ++ K +Q +
Sbjct: 241 PVPAEEQNLVNRHRKAFLDNMSDDLKTTDVLDGEDGLTDLLKAINSNMNDLKKLQQKLEQ 300
Query: 470 ------------------------LESLAALEKTIRNVLTVLGLM-STGYSEVLLQLREK 504
++ L ALE I++ L+VLGLM + SEVL QL++K
Sbjct: 301 QQKKQQQKKQQQKQQQTQKQPEDYIQGLIALETEIKDKLSVLGLMPPSSLSEVLNQLKDK 360
Query: 505 ALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPALPL 564
ALKRA+LTE+Q+ ++IE RTVARKNK++E SD IRK LA +GI+LMD P GT+WRP P
Sbjct: 361 ALKRANLTEEQLQEQIEQRTVARKNKQFEVSDEIRKHLATLGISLMDEPTGTSWRPCEPD 420
Query: 565 ALQEQAVATS 574
+E TS
Sbjct: 421 RPEESGSVTS 430
>gi|222053657|ref|YP_002536019.1| cysteinyl-tRNA synthetase [Geobacter daltonii FRC-32]
gi|254781681|sp|B9LZV4.1|SYC_GEOSF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|221562946|gb|ACM18918.1| cysteinyl-tRNA synthetase [Geobacter daltonii FRC-32]
Length = 494
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/494 (48%), Positives = 318/494 (64%), Gaps = 16/494 (3%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S +E P GKV MYVCGVT YD HIGHAR V FDV+YRY HLG +V
Sbjct: 3 LRVYNTLSGNKEEFVPVEPGKVKMYVCGVTVYDHCHIGHARANVVFDVIYRYFCHLGLDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN+TD+DDKII RAN G +S R+ +EF +DM L P+ +P+ ++H+ I
Sbjct: 63 TYVRNYTDIDDKIINRANREGVTYDLISERFIKEFDRDMERLGLKLPTCQPKATEHIDEI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I ++ ++D FAY+ GDV F V+KF Y +LSGR LED +AG R+ VD RK++P DFA
Sbjct: 123 ISLVQTLIDKDFAYQAGGDVNFCVEKFDSYLKLSGRTLEDMQAGARIEVDERKRHPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK AK GEPFWESPWG GRPGWHIECSAMS YLG +FDIHGGG DL+FPHHENEIAQS
Sbjct: 183 LWKEAKPGEPFWESPWGKGRPGWHIECSAMSMKYLGTTFDIHGGGKDLIFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA ++YW+HNGFV I+SEKMSKSLGNFFTI++V++ Y LR FL+ HYRSPI
Sbjct: 243 EAATGKPFVNYWLHNGFVNINSEKMSKSLGNFFTIKEVLDRYDNEVLRFFLLSAHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSL--------LDAAALKDSIPP--DTVTSINK 425
++S L A + IY+ L E+ L+ +DA++L ++ D TSI+
Sbjct: 303 DFSDQNLTEAEAGLERIYKALAAVEETLAAGNGCTGAPVDASSLNEAEGELFDKTTSISA 362
Query: 426 FHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKT-IRNVL 484
F +M DD +T + +A + D ++ +N +L G + SL L K + +
Sbjct: 363 ---RFGEAMDDDFNTALAMAHVFDLVRCVNRVLSETAGASD--NICSLCTLIKAEVAKIA 417
Query: 485 TVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAA 544
VLG+ S+ + L +L+ + D+ D++ + I +RT ARK K++++SD IR LAA
Sbjct: 418 GVLGIFSSKPASFLERLKSRKAGNLDIAVDEIERLIAERTAARKAKDFKRSDEIRDQLAA 477
Query: 545 VGIALMDSPVGTTW 558
I L+DS GTTW
Sbjct: 478 KNIVLLDSQQGTTW 491
>gi|218778624|ref|YP_002429942.1| cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218760008|gb|ACL02474.1| Cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 474
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/487 (48%), Positives = 313/487 (64%), Gaps = 16/487 (3%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT++R++E KP G V MYVCG T YD SHIGHAR V FD+++RYL+ GYEV
Sbjct: 3 LTLYNTLTRQKETFKPLKPGHVSMYVCGPTVYDSSHIGHARSAVVFDIVFRYLQESGYEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRNFTDVDDKII RANE D +LS Y +EFH+DM L L P++EPR ++ + I
Sbjct: 63 TYVRNFTDVDDKIINRANERDMDCQALSEIYIDEFHRDMDALAVLRPTLEPRATEFIKEI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I++ +++++ G AY VDGDVYF V F YG+LSGRKLED AG RV VDSRKK+P DFA
Sbjct: 123 IEVTSKLVEKGHAYVVDGDVYFDVRSFESYGKLSGRKLEDMEAGARVKVDSRKKDPFDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+ K GEP WESPWG GRPGWHIECSAMS + LG +FDIHGGG DL+FPHHENE+AQS
Sbjct: 183 LWKAKKPGEPAWESPWGEGRPGWHIECSAMSWSRLGETFDIHGGGQDLIFPHHENEVAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA + YW+HNGFV IDSEKMSKSL NF T++++++ +HP A+RLFL+ HYRSP+
Sbjct: 243 EAAFGQQFVRYWMHNGFVNIDSEKMSKSLNNFLTVKEILDQFHPEAVRLFLLSKHYRSPV 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
+++ ++ A+ + +Y L +++ LD D I+ + F A M
Sbjct: 303 DFTEQAMKEAASGLDRVYSCLQRILESVGGLD-----DDF------QISGHWSRFCACMD 351
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTR-KGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L L + ++ +N LL G Q E+ AA+ K + VLG+
Sbjct: 352 DDFNTAGALGILFEAVRDVNRLLDGDLTGDDQVRATEAGAAIVK----MGGVLGMFQEDP 407
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+E+A + V I R+ ARK+K++ +DAIR L +G+A+ D+P
Sbjct: 408 VAYFEGKKEQAAQDGGFDPAMVDDLIAKRSQARKDKDWNTADAIRDQLTEMGVAIEDTPD 467
Query: 555 GTTWRPA 561
GT W+ A
Sbjct: 468 GTIWKMA 474
>gi|392409460|ref|YP_006446067.1| cysteinyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
gi|390622596|gb|AFM23803.1| cysteinyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
Length = 480
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/488 (47%), Positives = 316/488 (64%), Gaps = 18/488 (3%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NTM+RK+E KP+ + GMYVCGVT YD HIGHAR V FD+++RYL GYEV
Sbjct: 3 LKIFNTMTRKKEDFKPRNPNRTGMYVCGVTVYDYCHIGHARSQVLFDIIFRYLMFKGYEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRNFTD+DDKII RANEL D L+ ++ EF+ DM L L P+ EP+ ++ + I
Sbjct: 63 TYVRNFTDIDDKIINRANELKIDWKELAEKFVREFYVDMDALGVLRPTREPKATEFIAQI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
+I ++++ +AY VDGDV FSV FPEYG+LSG+K+++ +G RV V+ +KKNP DFA
Sbjct: 123 QALIAKLVEGKYAYTVDGDVMFSVASFPEYGKLSGKKVDELMSGARVDVNEKKKNPLDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+AK GEP WESPWGPGRPGWHIECSAMS YLG FDIHGGG DL FPHHENEIAQS
Sbjct: 183 LWKAAKPGEPSWESPWGPGRPGWHIECSAMSMFYLGQHFDIHGGGADLTFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA + ++YW+HNGFV I +EKMSKSLGN IR +++ HP ALR FL+ +HYRSP+
Sbjct: 243 EAATGETFVNYWVHNGFVNIRAEKMSKSLGNVLNIRDILKTVHPEALRHFLLTSHYRSPL 302
Query: 376 NYS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
+YS V + +A ER++ L + L++A D +P + + F
Sbjct: 303 DYSDAFVKESSTALERLYAAMAALDE------LIEARGTSDDLPQE----LTGIEERFSE 352
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVL-TVLGLMS 491
+M DD +T LA L + +TIN + G + E L ++ I +V VLG++
Sbjct: 353 AMDDDFNTPRALAILFEAARTINRI----SGTNSVPKPELLREVKDRILHVAREVLGILR 408
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+E L + R+ ++E+ + Q I +R ARK+K + ++D IR +LA+ GI L D
Sbjct: 409 EDQTEFLERARKAGAPELGISEELIQQYIVERAEARKSKNFARADEIRNELASKGIVLED 468
Query: 552 SPVGTTWR 559
+P GT W+
Sbjct: 469 TPKGTIWK 476
>gi|116749069|ref|YP_845756.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
gi|171460796|sp|A0LIR9.1|SYC_SYNFM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|116698133|gb|ABK17321.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
Length = 493
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/489 (47%), Positives = 316/489 (64%), Gaps = 5/489 (1%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E P GKV YVCGVT YDLSHIGHAR + FDV+YRYLR LG+EV
Sbjct: 3 LHVYNTLTKSKEEFIPLEPGKVKFYVCGVTVYDLSHIGHARSAIVFDVIYRYLRFLGFEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRNFTDVDDKII RAN+ G D S+++RY F++DM L L P +EP ++++P +
Sbjct: 63 TYVRNFTDVDDKIIRRANDAGTDCRSIAQRYIAAFYEDMDALGVLRPDLEPLATENVPGM 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I++I ++D G AY+ DV+F ++KFP YG+LSGR++ED AG RV VD+RK+NP DF
Sbjct: 123 IEIIRVLMDKGIAYQAGADVFFEIEKFPGYGKLSGRQIEDMLAGARVEVDARKRNPLDFV 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK +K GEP W+SPWGPGRPGWHIECSAM + +LG +FDIHGGG DL+FPHHENEIAQS
Sbjct: 183 LWKGSKPGEPSWDSPWGPGRPGWHIECSAMGSRFLGKTFDIHGGGKDLIFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA + YW+HNGFV I++EKMSKSLGNF TIR V++ HP +R F++ HYRSP+
Sbjct: 243 EAAFGMPFVRYWLHNGFVNINNEKMSKSLGNFLTIRDVLQKVHPETVRFFVLSKHYRSPV 302
Query: 376 NYSVVQLESASERIFYIYQTLHDC-EKALSLLDAAALKDSI---PPDTVTSINKFHNDFL 431
++S + A + + +Y TL E+A + ++ A + ++ P+ I F
Sbjct: 303 DFSDETIGEAEKGLERLYGTLGAVKERAAAGVEEAFQEKALRGQDPELFDQIAALSGAFR 362
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLA-ALEKTIRNVLTVLGLM 490
+M +D +T L L + + L K+ +LA A IR+ VLGL+
Sbjct: 363 EAMDNDFNTAQALGNLFSLQRHLQRFLDKFGRKQLKGPASALARAGADAIRDHALVLGLL 422
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
+ + R +K LTE +V + IE R AR++K + ++D +R+++ GI L
Sbjct: 423 TREPEAFQAEQRSLKIKSTGLTEAEVERCIELRRQARQDKNFAEADRLREEIEKKGIQLE 482
Query: 551 DSPVGTTWR 559
DSP GT WR
Sbjct: 483 DSPAGTRWR 491
>gi|77165712|ref|YP_344237.1| cysteine--tRNA ligase [Nitrosococcus oceani ATCC 19707]
gi|254433143|ref|ZP_05046651.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
gi|109894913|sp|Q3J8Y9.1|SYC_NITOC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|76884026|gb|ABA58707.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
gi|207089476|gb|EDZ66747.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
Length = 485
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/493 (47%), Positives = 309/493 (62%), Gaps = 20/493 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E P GKV MYVCG+T YDL H+GHARV V FD++ RYLR G+EV
Sbjct: 2 LRIYNSLTRRKEEFIPIESGKVRMYVCGMTVYDLCHVGHARVMVVFDMVVRYLRASGFEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ RY + H+D L LPP EPR ++ M I
Sbjct: 62 IYVRNITDIDDKIIHRANERGESIHTLTARYIQALHEDEASLQILPPDREPRATESMEAI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ Q+LD G+AY+ + GD+Y+ V F YG LSGR LED RAGERV V+ K +P DF
Sbjct: 122 LAMVRQLLDQGYAYQGENGDIYYDVSHFEGYGALSGRHLEDLRAGERVQVNEAKTDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWGPGRPGWHIECSAMS LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKSGEPAWESPWGPGRPGWHIECSAMSIQELGTHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++YW+HNGFV ++ EKMSKSLGNFFT+R+V+E YHP LR F++ +HYRSP
Sbjct: 242 SEAATGGKFVNYWMHNGFVRLNDEKMSKSLGNFFTVREVLEHYHPEVLRYFILSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ QL++A + +Y L + A L + + F F +M
Sbjct: 302 LNYTKQQLDTAKAAMTRLYTALRGIPRGEDRASAQGLS----WEFTDGGDPFVLRFREAM 357
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA L N++ H ++A E +L +R++ +LGL++
Sbjct: 358 DDDFNTPEALALL-------NEVRHALNRAREAGDTEKGQSLAVLLRSLGGILGLLAHEP 410
Query: 495 SEVLLQLREKAL--------KRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVG 546
+ L R+ A + A L+ D + Q + RTVARKNK++ ++D IR L G
Sbjct: 411 EQFLRDSRQVAAIPDTAAAGEEAVLSHDGIEQLVAQRTVARKNKDWAEADRIRGILKDQG 470
Query: 547 IALMDSPVGTTWR 559
I L D+ GT WR
Sbjct: 471 ITLEDTAAGTLWR 483
>gi|300114660|ref|YP_003761235.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
gi|299540597|gb|ADJ28914.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
Length = 495
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/496 (47%), Positives = 313/496 (63%), Gaps = 16/496 (3%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++RK+E P GKV MYVCG+T YDL H+GHARV V FDV+ RYLR G+EV
Sbjct: 2 LRIYNSLTRKKEEFIPIESGKVRMYVCGMTVYDLCHVGHARVMVVFDVVARYLRASGFEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ RY + H+D L LPP EPR ++ M I
Sbjct: 62 MYVRNITDIDDKIIHRANEKGESIHALTARYIQALHEDEASLQILPPDREPRATESMEAI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ Q+L+ G+AY+ + GD+Y+ V F YG LSG+ LED RAGERV V+ K +P DF
Sbjct: 122 LAMVRQLLEQGYAYQGENGDIYYDVSHFEGYGALSGKHLEDLRAGERVQVNEAKTDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK EP WESPWGPGRPGWHIECSAMS LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPDEPAWESPWGPGRPGWHIECSAMSIQELGVHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + ++YW+HNGFV +D EKMSKSLGNFFT+R+V+E YHP LR F++ +HYRSP
Sbjct: 242 SEAATGSKFVNYWMHNGFVRLDDEKMSKSLGNFFTVREVLEHYHPEVLRYFILSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS QL++A + +Y L + D A + + V + F F +M
Sbjct: 302 LNYSKQQLDTAKAAMTRLYTALRGIPRG----DDRASAQGLSWEFVDGEDPFILRFREAM 357
Query: 435 SDDLHTTVVLAALSDPLKTINDLLH---TRKGKKQAMRLESLAAL--------EKTIRNV 483
DD +T LA L++ +N T KG+ A+ L +L + E+ +R+
Sbjct: 358 DDDFNTPEALALLNEVRHALNRARKGGDTEKGQSLAVLLRALGGILGLLAHEPEQFLRDP 417
Query: 484 LTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLA 543
++ + T + L + + ++ L+ D + Q + RTVARKNK++ ++D IR L
Sbjct: 418 RQMVVVSDTAKTTSLSLTSQTSTEKVVLSHDGIEQLVAQRTVARKNKDWAEADRIRGILK 477
Query: 544 AVGIALMDSPVGTTWR 559
GI L D+ GT WR
Sbjct: 478 DQGITLEDTAAGTLWR 493
>gi|148266184|ref|YP_001232890.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
gi|189082065|sp|A5G949.1|SYC_GEOUR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146399684|gb|ABQ28317.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
Length = 494
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/492 (46%), Positives = 321/492 (65%), Gaps = 12/492 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++ +E P GKV MYVCGVT YD HIGHAR V FDV+YRYLR LG EV
Sbjct: 3 LRVYNTLTGTKEDFVPIEPGKVKMYVCGVTVYDHCHIGHARANVVFDVIYRYLRSLGLEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN+TD+DDKII RAN G ++S R+ +EF +DM L L P+ +P+ ++H+P I
Sbjct: 63 NYVRNYTDIDDKIINRANREGVAYDAISERFIKEFDRDMAQLGLLLPTSQPKATEHIPEI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I ++ ++D GFAY++ GDV F V+KF Y +LS R LED +AG R+ VD RK++P DF
Sbjct: 123 ITLVQTLIDKGFAYQMGGDVNFCVEKFDPYLKLSKRNLEDMQAGARIEVDERKRHPMDFV 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK AK GEPFWESPWG GRPGWHIECSAMS YLG +FDIHGGG DLVFPHHENEIAQS
Sbjct: 183 LWKEAKPGEPFWESPWGKGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA + YW+HNGFV I+SEKMSKSLGNFFTI++V++ Y LR FL+ HYRSP+
Sbjct: 243 EAASGKPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEVLDKYDSEVLRFFLLSAHYRSPL 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSL--------LDAAALKDSIPPDTVTSINKFH 427
++S L A + IY+ L ++ L+ +DA++L ++ +
Sbjct: 303 DFSDQNLTEAETGMERIYKALVAIDETLASNPATGGEEIDASSLGEA-ERELFDKSGSLP 361
Query: 428 NDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAA-LEKTIRNVLTV 486
F +M DD +T + + + D ++ +N +L + K+++ L +L A ++ I + V
Sbjct: 362 LRFREAMDDDFNTALAMGHIFDLVRCVNRVLS--EAKERSNTLSALCAQVKANIGKIADV 419
Query: 487 LGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVG 546
LG+ ++ + +L +L+++ D++ +++ + I +R ARK K++++SD IR L
Sbjct: 420 LGIFTSEPASLLTRLKDRKASELDISVEEIERLITERAAARKAKDFKRSDEIRDFLLGKN 479
Query: 547 IALMDSPVGTTW 558
I L+DS GT+W
Sbjct: 480 IVLLDSAQGTSW 491
>gi|335043568|ref|ZP_08536595.1| cysteinyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
gi|333790182|gb|EGL56064.1| cysteinyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
Length = 463
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/494 (47%), Positives = 308/494 (62%), Gaps = 44/494 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E+ KP EGKV MYVCG+T YDL H+GHARV V FDV+ RYLR LGY+V
Sbjct: 2 LKIYNSLTRQKEVFKPLQEGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYLRALGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ RY +E H+D L L P +EP+ ++ M I
Sbjct: 62 TYVRNITDIDDKIIKRAAENGESIQALTERYIDEMHKDADALGVLRPDIEPKATESMTEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++ G AY+ D GDVY+ V +F YG+LSGR +ED RAGER+AV+ K +P DF
Sbjct: 122 LAMIETLISKGLAYKADNGDVYYDVSQFNGYGKLSGRNIEDLRAGERIAVNEAKTDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWG GRPGWHIECSAMSA LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGEGRPGWHIECSAMSAHCLGEQFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A ++YW+HNGFV ID EKMSKSLGNFFT+R+V+E Y A+R F++ +HYRSP
Sbjct: 242 SEGAHGCQSVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLEQYPAEAIRYFILSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSIN-----KFHND 429
+NY+ QLE A + Y TL + DT +N +F
Sbjct: 302 LNYAEDQLEQAKAALTRFYTTLREV------------------DTTQKVNWQDDEEFGGR 343
Query: 430 FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGL 489
F A+M DD +T + L+ ++D + IN K ++QA E++A L + + VLGL
Sbjct: 344 FKAAMDDDFNTALALSVMADVRQAIN------KAREQAQS-EAVAYLAGLLSSFGDVLGL 396
Query: 490 MSTGYSEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAV 545
+ L D + DQ+ I+ +R AR +K + ++D IR L +
Sbjct: 397 FQQDADKFLT---------GDSSSDQLAVDIDSLVAERNQARADKNWARADEIRDQLTEM 447
Query: 546 GIALMDSPVGTTWR 559
GI L D+ T+WR
Sbjct: 448 GIVLEDAAGKTSWR 461
>gi|357633334|ref|ZP_09131212.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
gi|357581888|gb|EHJ47221.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
Length = 485
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/484 (46%), Positives = 303/484 (62%), Gaps = 3/484 (0%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
+ L+NTM+R +E ++ GKV MYVCG+T YDL HIGHAR V FDVL RYLRHLGYEV
Sbjct: 1 MQLFNTMARGKEPFVSRLPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHLGYEV 60
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRNFTDVDDKII +AN G ++ RY F++DM L L EPR ++++ +
Sbjct: 61 TFVRNFTDVDDKIIKKANSEGATSAEIAERYIAAFYEDMDRLGILRADAEPRATEYIAEM 120
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
DM ++++NG AYR GDVYF V F YG+LSGR +ED R+G RVA K++P DF
Sbjct: 121 ADMAARLIENGHAYRTPSGDVYFRVRSFDGYGKLSGRDVEDMRSGARVAPGEEKEDPLDF 180
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK++K GEP W+SP+GPGRPGWH+ECS MS LG DIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKASKPGEPVWDSPFGPGRPGWHLECSVMSEKLLGIPIDIHGGGQDLIFPHHENEIAQ 240
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + +W+HNGFV I++EKMSKSLGNF TIR + E Y P LR FL+ +HYRSP
Sbjct: 241 SEAATGSDFCRFWVHNGFVRINTEKMSKSLGNFVTIRTIYERYLPEVLRFFLVSSHYRSP 300
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YS L+ A + I IY E+AL+ + K +PP+ +NK F +M
Sbjct: 301 LDYSDQALDEAEKGIKRIYAAKGQMEQALTRAKWSETK--LPPEIGQELNKLEEGFTGAM 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DDL+T + + ++ +L + K E+L + + +LG+
Sbjct: 359 DDDLNTAQAIGHVFGLVRLAGRVLDDKTLAKSREAAEALGRILADLDTWSGILGVFGRDS 418
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E L +L+ L R + +V + +R ARK K++ +SDAIR +LA +G+ +MD+P
Sbjct: 419 REFLAELKASRLARLGIDAARVDGLVAERQEARKTKDFARSDAIRDELAGLGVTVMDTPA 478
Query: 555 GTTW 558
G W
Sbjct: 479 GPQW 482
>gi|78357164|ref|YP_388613.1| cysteinyl-tRNA synthetase [Desulfovibrio alaskensis G20]
gi|109894898|sp|Q30ZH8.1|SYC_DESDG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78219569|gb|ABB38918.1| cysteinyl-tRNA synthetase [Desulfovibrio alaskensis G20]
Length = 485
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/482 (46%), Positives = 309/482 (64%), Gaps = 3/482 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++RK+E P+ EGK +YVCG+T YDL H+GHAR V FDVL RYLRH G +V +
Sbjct: 3 LYNTLTRKKEKFIPQREGKASVYVCGITAYDLCHLGHARSSVAFDVLVRYLRHTGLDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTDVDDKII RA E G ++ +Y FH+DM L CL +EPR + H+ +I
Sbjct: 63 VRNFTDVDDKIIKRAGETGLTSTEVAEKYMAAFHEDMDRLGCLRADIEPRCTQHIGEMIA 122
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ ++ G AY GDVYF V F YG+LSGR ++D R+G RVA K++P DFAL
Sbjct: 123 LCEDLISKGKAYSTASGDVYFRVRSFASYGKLSGRDVDDMRSGARVAPGEEKEDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WKSAK GEP+WESPWG GRPGWHIECSAMS +L DIHGGG DLVFPHHENEIAQ+
Sbjct: 183 WKSAKPGEPYWESPWGNGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFPHHENEIAQTE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA YW+HNGFV +++EKMSKSLGNF TIR +++ Y P LR FL+ HYRSPI+
Sbjct: 243 AATGKEFARYWVHNGFVQVNAEKMSKSLGNFSTIRDILQGYLPETLRYFLLTKHYRSPID 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
++ ++ A + + IYQTL+ E L +A +P + ++ +++ + +M D
Sbjct: 303 FTFDGMDEAEKNLRRIYQTLNLVENELQKTKWSAA--PLPEEVLSEMDETERAWNEAMED 360
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
DL+T L + ++ +N ++ + +K A ++L ++ + VLGL + +E
Sbjct: 361 DLNTAAALGHIFGLVRLVNRIIEDKTMRKSAQARDALLRMQSMMARWGAVLGLFTRQPAE 420
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L ++R+ R D+ +V + +R ARK K++E+SDAIR++LA +G+ + D+P G
Sbjct: 421 FLREMRDCRAARRDVDTARVETLLLERQEARKAKDFERSDAIREELARMGVEVQDTPAGA 480
Query: 557 TW 558
W
Sbjct: 481 AW 482
>gi|386392194|ref|ZP_10076975.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. U5L]
gi|385733072|gb|EIG53270.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. U5L]
Length = 485
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/484 (46%), Positives = 303/484 (62%), Gaps = 3/484 (0%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
+ L+NTM+R +E ++ GKV MYVCG+T YDL HIGHAR V FDVL RYLRHLGYEV
Sbjct: 1 MQLFNTMARGKEPFVSRLPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHLGYEV 60
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRNFTDVDDKII +AN G ++ RY F++DM L L EPR ++++ +
Sbjct: 61 TFVRNFTDVDDKIIKKANSEGATSAEIAERYIAAFYEDMDRLGILRADAEPRATEYIAEM 120
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
DM ++++NG AYR GDVYF V F YG+LSGR +ED R+G RVA K++P DF
Sbjct: 121 ADMAARLIENGHAYRTPSGDVYFRVRSFAGYGKLSGRDVEDMRSGARVAPGEEKEDPLDF 180
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK++K GEP W+SP+GPGRPGWH+ECS MS LG DIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKASKPGEPVWDSPFGPGRPGWHLECSVMSEKLLGIPIDIHGGGQDLIFPHHENEIAQ 240
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA N +W+HNGFV I++EKMSKSLGNF TIR + + Y P LR FL+ +HYRSP
Sbjct: 241 SEAATGNDFCRFWVHNGFVRINTEKMSKSLGNFVTIRDIYKRYLPEVLRFFLVSSHYRSP 300
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YS L+ A + I IY E+AL+ A + +PP+ + K F A+M
Sbjct: 301 LDYSDQALDEAEKGIKRIYAAKGQMEQALA--RAKWSETRLPPEIGQELAKLEEGFTAAM 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DDL+T + + ++ +L + K E+L + + +LG+
Sbjct: 359 DDDLNTAQAIGHVFGLVRLAGRVLDDKTLAKSREAAEALRRILADLDTWSGILGVFGRDS 418
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E L +L+ L R + +V + +R ARK K++ +SDAIR +LA +G+ +MD+P
Sbjct: 419 REFLAELKASRLARLGIDAVRVDGLVAERQEARKTKDFARSDAIRDELAGLGVTVMDTPA 478
Query: 555 GTTW 558
G W
Sbjct: 479 GPQW 482
>gi|376297517|ref|YP_005168747.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
gi|323460079|gb|EGB15944.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
Length = 485
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/482 (45%), Positives = 309/482 (64%), Gaps = 3/482 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT+ R++E P V MYVCG+T YDL HIGHAR V FDVLYRYL+H GY+V +
Sbjct: 3 LYNTLKRRKEEFTPAHNNDVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLKHEGYDVNF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RNFTD+DDKII RANE+G++ ++ ++ EF+ DM L+ PSVEP+ ++H+P +I
Sbjct: 63 IRNFTDIDDKIIKRANEVGKEASEIAEKFIGEFYVDMDRLNIERPSVEPKCTEHIPEMIA 122
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ +++D G AY GDVYF V F YG+LSGR +++ +G R+A K++P DFAL
Sbjct: 123 LTQRLIDKGHAYATPSGDVYFKVRSFEGYGKLSGRNIDELESGARIAPGEEKEDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEPFWESPWG GRPGWH+ECSAMS Y DIHGGG DL FPHHENE+AQS
Sbjct: 183 WKAAKPGEPFWESPWGKGRPGWHLECSAMSEKYADLPLDIHGGGQDLAFPHHENEVAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA +YW+HNGFV I+SEKMSKSLGNFFTIR ++ + P LR FL+ HYRSP++
Sbjct: 243 AATGKPFANYWVHNGFVQINSEKMSKSLGNFFTIRDILAKFLPETLRYFLLTMHYRSPLD 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
+S LE A + + IY L+ ++ L+ K P + V ++ F +M+D
Sbjct: 303 FSFDALEEAEKGLKRIYSALNQIDEELAR--DKWKKSPFPEELVKELDDLEKHFAEAMAD 360
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
DL+T L + ++ + + +K + A ++ + + +VLG+ +E
Sbjct: 361 DLNTAGALGHVFSAIRLAGRVAEDKNLRKSEGGRDLFARIKADMADWASVLGIFERKPAE 420
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
LL+LR+ RA + +V + ++ R ARK+K++ +SDAIR +LAA+ + + D+P G
Sbjct: 421 FLLELRDSRAARAGIDPAKVRELLDARAQARKDKDFARSDAIRDELAAMQVEVHDTPQGA 480
Query: 557 TW 558
TW
Sbjct: 481 TW 482
>gi|406912438|gb|EKD52050.1| hypothetical protein ACD_62C00126G0006 [uncultured bacterium]
Length = 530
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/485 (45%), Positives = 317/485 (65%), Gaps = 13/485 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT++RK+E KP +GKVGMY CGVT YD H+G+AR V FDVL+RYL+++GY+V
Sbjct: 49 LTLYNTLTRKKEEFKPLTDGKVGMYACGVTVYDYCHLGNARAMVNFDVLHRYLKYVGYDV 108
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRNFTDVDDKII +AN ++ +Y F++D L + P++EPR +DH+P I
Sbjct: 109 TFVRNFTDVDDKIIRKANAENISCSEVTSKYIAAFYEDTNALGLVNPTIEPRATDHIPDI 168
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I +I +++D G AY++ GDV+++V FP+YG+LSG+ +ED +G RV V KK+P DFA
Sbjct: 169 IAIINKLVDKGLAYQIGGDVFYAVRSFPQYGKLSGKNIEDLESGARVDVSDVKKDPLDFA 228
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWKSAK EP W SPWG GRPGWHIECSAMS YLG +FDIH GG DL+FPHHENEIAQS
Sbjct: 229 LWKSAKPNEPKWPSPWGEGRPGWHIECSAMSTKYLGDTFDIHCGGCDLIFPHHENEIAQS 288
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A +W+HNGF+ IDSEKMSKSLGNFFT R+V++ + A+R F++ HYRSPI
Sbjct: 289 EGATGKPFARFWVHNGFLNIDSEKMSKSLGNFFTTREVLKKFPAEAIRHFILSAHYRSPI 348
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAAL--KDSIPPDTVTSINKFHNDFLAS 433
+YS + + + + YQT EK + A+ + +P + N+F+ +
Sbjct: 349 DYSEKNISDSIKALERFYQTKSRLEKFIQQPSDPAIPSQQHVP----AKLENLKNEFIMA 404
Query: 434 MSDDLHTTVVLAALSDPLKTINDLL-HTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+ DDL+T +V+ + + ++T N L+ R +K A + I ++ VLG+ +
Sbjct: 405 LDDDLNTAMVMGLVFEWVRTWNKLIDENRANQKDAKDFLDI------INDIHKVLGVFGS 458
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L +L++K + + E+ +L+ IE+R +ARKN+++++SD IR L GI L D+
Sbjct: 459 DANAYLDELKQKGMAGLLVLEEDILKLIEERKLARKNRDFKRSDEIRDQLLKQGITLKDN 518
Query: 553 PVGTT 557
GTT
Sbjct: 519 TDGTT 523
>gi|357406814|ref|YP_004918738.1| cysteinyl-tRNA synthetase [Methylomicrobium alcaliphilum 20Z]
gi|351719479|emb|CCE25155.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Methylomicrobium
alcaliphilum 20Z]
Length = 462
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/486 (47%), Positives = 311/486 (63%), Gaps = 29/486 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++EL KP++EGK G+YVCG+T YD H+GHARV V FDV+ RYLR+LGY +
Sbjct: 2 LKIYNTLTRQKELFKPRLEGKAGLYVCGMTVYDYCHVGHARVMVVFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA + GED SL+ R+ E H+D L LPP +EP+ + +P I
Sbjct: 62 TYVRNVTDIDDKIIQRARDNGEDFQSLTERFIEAMHEDERALSVLPPDIEPKATQSIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI +++ NG AY +GDV++SV KF YG+LSG+ L + +AGERV ++ K++P DF
Sbjct: 122 LAMIEKLIANGIAYVGSNGDVFYSVSKFSNYGRLSGKNLAELQAGERVEIEQAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWG GRPGWHIECSAMS LG+ FDIHGGGMDL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGQGRPGWHIECSAMSTGCLGNHFDIHGGGMDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A ++YW+HNGFV I+ EKMSKSLGNFFT+R+V++ Y +R F++ +HYRSP
Sbjct: 242 SEGATGEKFVNYWMHNGFVRINEEKMSKSLGNFFTVREVLKRYRSEVVRFFILTSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A+ + +Y +L +DA + + D + F +M
Sbjct: 302 LNYSNEHLDEAAVALTRLYTSLRG-------IDAGEFE--VEAD-------YEARFREAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T V L+ L D + +N + + K R LAA TIR + VLG++
Sbjct: 346 DDDFNTPVALSVLFDMARELNKVKDSDK-----QRASQLAA---TIRGLGGVLGILQDDA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP- 553
L+E + LT +Q+ I+ R A+KNK + ++D IR L G+ L D P
Sbjct: 398 ERF---LKEGDNQAEGLTAEQIETLIQARIDAKKNKNWAEADKIRDQLKQQGVILEDVPG 454
Query: 554 VGTTWR 559
GT WR
Sbjct: 455 GGTNWR 460
>gi|389580502|ref|ZP_10170529.1| cysteinyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
gi|389402137|gb|EIM64359.1| cysteinyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
Length = 480
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/486 (46%), Positives = 307/486 (63%), Gaps = 12/486 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S K+E P KVGMYVCG T YD SHIGHAR V FD++YR+L LGYEV
Sbjct: 3 LRIYNTLSGKKEEFVPIRANKVGMYVCGPTVYDTSHIGHARSVVVFDMVYRWLMQLGYEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRNFTDVDDKII ++NE G+ +++ +Y +EFH +M L+ L P++ P+ ++H+ HI
Sbjct: 63 TYVRNFTDVDDKIIKKSNETGDSCTAITTKYIDEFHNEMDALNVLRPTIAPKATEHIDHI 122
Query: 196 IDMITQILDNGFAYRVDG-DVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I + +++D G AY V+G DVYFS+ F EYG+LS R +D +AG R+AVD +K++P DF
Sbjct: 123 IRFVQRLIDLGKAYHVEGGDVYFSISSFSEYGKLSHRNPDDMQAGARIAVDEKKRSPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP+W+SPWG GRPGWHIECSAMS YLG SFDIHGGG DL+FPHHENEIAQ
Sbjct: 183 TLWKPAKPGEPYWDSPWGKGRPGWHIECSAMSYEYLGESFDIHGGGKDLIFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ + YWIHNGFV I++EKMSKSLGNF I++V+ Y P +R+FL+ HYRSP
Sbjct: 243 SEASFGVPFVKYWIHNGFVDINNEKMSKSLGNFTMIKEVLADYSPEVIRMFLLSKHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINK-FHNDFLAS 433
I+YS + S + IY L +KA PPD + D + +
Sbjct: 303 IDYSENSMREVSVALDRIYGFLERLDKA----------GITPPDAAGGEHGPLWADIVEA 352
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
++DD ++ +A + D +K N LL + LA + IR+ +LG+
Sbjct: 353 LNDDFNSAKAMAEIFDAVKKGNKLLDDANDAPGESDRKVLAGIYADIRSASEILGIFMIC 412
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
++ +++A+ D+ + I +R ARK+K + ++D IR L A+ I L D P
Sbjct: 413 AADYFAAKKDRAMADQDVDSAMIDALIVERANARKSKNFARADEIRDQLQAMKIVLEDGP 472
Query: 554 VGTTWR 559
GTTWR
Sbjct: 473 QGTTWR 478
>gi|120602598|ref|YP_966998.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
gi|187629811|sp|A1VDQ5.1|SYC_DESVV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120562827|gb|ABM28571.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
Length = 485
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/484 (46%), Positives = 304/484 (62%), Gaps = 7/484 (1%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YN++SR++EL P V GKV MYVCG+T YDL HIGHAR V FDVL RYLRH G +V +
Sbjct: 3 IYNSLSRRKELFTPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
RNFTDVDDKII RANE G ++ +Y + F++DM L+ L +EP+ + H+ +I
Sbjct: 63 ARNFTDVDDKIIKRANEEGLTSQQVAEKYIDTFYEDMDRLNVLRADIEPKATGHILEMIA 122
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ +++ G AY GDVYF V FPEYG+LSGR ++D R+G RVA K++P DFAL
Sbjct: 123 LCEKLIAKGKAYATPSGDVYFRVRSFPEYGKLSGRDIDDMRSGARVAPGEEKEDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WKSAK GEP W SPWG GRPGWHIECSAMS ++ DIHGGG DL+FPHHENEIAQ+
Sbjct: 183 WKSAKPGEPSWTSPWGEGRPGWHIECSAMSEKHMPLPLDIHGGGQDLIFPHHENEIAQTE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA + + YW+HNGFV +D+EKMSKSLGNF TIR ++E Y P LR FL+ HYRSPI+
Sbjct: 243 AALDKPFVRYWMHNGFVQVDAEKMSKSLGNFKTIRDILEGYLPEVLRFFLLTKHYRSPID 302
Query: 377 YSVVQLESASERIFYIYQ--TLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++ ++ A + + IY+ +L E+ S A L P D + F ++
Sbjct: 303 FTFDSMDEAEKSLKRIYEALSLARTERGRSKWSATPL----PADVTAEFDTLDRAFDEAL 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DDL+T L + ++ +N LL + +K A L L L+ + + VLG+
Sbjct: 359 EDDLNTAAALGHVFGTIRLVNRLLEDKNLRKSAETLALLERLDGLVAKWMKVLGVFGREP 418
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L L+E ++R + +V +E+R R K++ ++DAIR +LAA+GI + D+P
Sbjct: 419 EAFLSDLKECRIRRKGIDTTKVDALLEERKSVRAAKDFARADAIRDELAALGIEVRDTPS 478
Query: 555 GTTW 558
G W
Sbjct: 479 GAVW 482
>gi|297568576|ref|YP_003689920.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
gi|296924491|gb|ADH85301.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
Length = 494
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/498 (45%), Positives = 304/498 (61%), Gaps = 16/498 (3%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
++NT + ++E + P EG V MYVCG+T YD HIGHAR + FD++YRYL+H GY V +
Sbjct: 5 IHNTKTARKEKLAPLEEGHVKMYVCGITAYDYCHIGHARSVLVFDMIYRYLQHRGYRVTF 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTD+DDKII RA E G LS+R+ +FH+DM L+ LPP++EP ++H+P +I
Sbjct: 65 VRNFTDIDDKIIKRAQEQGTTCTELSQRFIAKFHEDMTALNTLPPTLEPLATEHLPEMIA 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
MI +++ AY GDVY+ V +F YG LSGR LED +AG RVAV+ K++P DF LW
Sbjct: 125 MIEELVAKDLAYEAQGDVYYRVQRFAGYGVLSGRGLEDMQAGARVAVNDNKEHPMDFVLW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K++K GEP W+SPWGPGRPGWHIECSAM YLG +FDIHGGG DLVFPHHENEIAQS
Sbjct: 185 KASKPGEPAWDSPWGPGRPGWHIECSAMGKKYLGETFDIHGGGKDLVFPHHENEIAQSEG 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A S + W+H+GFVTI EKMSKSLGNF TIR+V+E + ALRLF+ THYR+P++Y
Sbjct: 245 ASGKSFANLWVHHGFVTIKDEKMSKSLGNFLTIREVLERHPAEALRLFVFSTHYRNPLDY 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTS------INKFHNDFL 431
S L+ A + IY L A + L AA D P +V + K F
Sbjct: 305 SETALQDAEAALTRIYSAL----AATAQLPGAA-GDPSPSASVVGEKDRDKLAKLEQSFH 359
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M D ++ + L + D +K IN + L+ L TIR++ V GL
Sbjct: 360 QAMDIDFNSALALGRIFDAIKIINKVRQALPANPAPQDLQLLQQTAATIRDLTAVFGLAQ 419
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
L + +++ L + + ++ +E R AR++K++ ++D IR L I + D
Sbjct: 420 EEPVSWLEKRQQRLLAQLSIKPAEIEALLEQREQARRDKDWAEADRIRDQLLQQRIVIKD 479
Query: 552 SPVGTTWRPALPLALQEQ 569
P GT W LQEQ
Sbjct: 480 GPDGTKWE-----VLQEQ 492
>gi|451947839|ref|YP_007468434.1| cysteinyl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
gi|451907187|gb|AGF78781.1| cysteinyl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
Length = 489
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/481 (43%), Positives = 303/481 (62%), Gaps = 1/481 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++RK+EL+KP G + +YVCG+T YD HIGHAR + FD++ RYLR+ G +V Y
Sbjct: 5 IYNTLTRKKELLKPIEPGHIKLYVCGITSYDYCHIGHARSALAFDMIVRYLRYRGNKVTY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RNFTD+DDKIIARA E G L+ R+ +EF+ DM L P++EP+ ++H+ +ID
Sbjct: 65 IRNFTDIDDKIIARAEEQGTTTEELANRFIDEFYVDMDRLGVDRPTMEPKATEHIQEMID 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
++++++D G AY GDVY+ V F YG+LSGR L+D +AG RV+V+ K +P DF +W
Sbjct: 125 LVSELIDKGMAYPAGGDVYYKVHSFDGYGKLSGRNLDDMQAGARVSVNENKTDPMDFVMW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K++K GEP W+SPWGPGRPGWHIECSAMS YLG +FDIHGGG DL+FPHHENE+AQS
Sbjct: 185 KASKPGEPSWDSPWGPGRPGWHIECSAMSRKYLGSTFDIHGGGQDLIFPHHENELAQSEG 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A N ++ WIH+GFVTI EKMSKSLGNF TIR ++ YHP LR F+ T YR+P+++
Sbjct: 245 ANNKPFVNMWIHHGFVTIRDEKMSKSLGNFLTIRDILAHYHPEVLRFFIFSTQYRNPLDF 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S ++ A + +Y+ + C+ AL + + + P + I F +M +D
Sbjct: 305 SEAAMQDAMTGLDRLYECIAACD-ALGTAHSDSAEIVATPKDIKKIESLEERFQKAMDND 363
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T A+L + +K IN ++ L + I + ++G++ +E
Sbjct: 364 FNTAQAQASLFETVKVINKIIQQLPDVPATSDYNLLKSGSADIVKLAAIMGIVQENAAEY 423
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
L + L D++E ++L I +R AR +K + +SD IR +L GI L D P GT
Sbjct: 424 LAHKKAAMLAETDISEAEILALIAERNQARTDKNWTRSDEIRDELLDRGIELKDGPEGTG 483
Query: 558 W 558
W
Sbjct: 484 W 484
>gi|444913172|ref|ZP_21233326.1| Cysteinyl-tRNA synthetase [Cystobacter fuscus DSM 2262]
gi|444716175|gb|ELW57030.1| Cysteinyl-tRNA synthetase [Cystobacter fuscus DSM 2262]
Length = 488
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/492 (45%), Positives = 314/492 (63%), Gaps = 6/492 (1%)
Query: 72 ASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHL 131
A+ + L+NTM+ ++E + P V GK+G+YVCG T Y HIG+AR + +FDV+ RYLRH
Sbjct: 2 AAASIRLFNTMTMQKETLVPVVPGKLGVYVCGPTVYSYVHIGNARTFTSFDVVVRYLRHR 61
Query: 132 GYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDH 191
G+EV YVRN+TDVDDKII A E GE P++L+ R+ E F +D LH L P V P+VSDH
Sbjct: 62 GFEVTYVRNYTDVDDKIIKAAQETGEAPVALAARFVEAFREDARALHLLEPDVSPKVSDH 121
Query: 192 MPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNP 251
+P I+ +I +++D G AY GDVYFSV ++P+Y +LS R L++ GERV +K P
Sbjct: 122 IPEILRIIGKLVDKGVAYASQGDVYFSVRRYPDYAKLSKRDLDELCVGERVQPGEQKHEP 181
Query: 252 ADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
DFALWK+AK GEP W+SPWGPGRPGWHIECSAMS YLG +FDIHGGG+DL+FPHHENE
Sbjct: 182 LDFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSERYLGETFDIHGGGLDLIFPHHENE 241
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
+AQS AA ++ YW+H GF+ ++ KMSKSLGN +R+ +E ALR F + THY
Sbjct: 242 LAQSEAASGHTLARYWMHCGFLDLEGAKMSKSLGNVVRLREALERVDAEALRFFFLSTHY 301
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
R P+ +S L A R+ Y Y+TL ++ + K+ P +F DF
Sbjct: 302 RHPLAFSDKGLADAELRMEYFYETLRKVDERV------GGKEFAPGPLHGDAARFMADFE 355
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A M DD ++ L LS +N+L+ K +A+ +L AL + +R V +LGL
Sbjct: 356 AQMDDDFNSAGALGVLSGLFAMMNELVDKPPVKDKAVVGRTLRALREDVRKVSGILGLFE 415
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ LL+ R++A+K L +V Q + R ARK K++ ++D +R +L ++G+ +MD
Sbjct: 416 EAPASWLLRRRDRAVKERGLDVARVEQLMAARAEARKAKDFAEADRLRVELKSLGVEIMD 475
Query: 552 SPVGTTWRPALP 563
+ GT W+ A P
Sbjct: 476 TAAGTLWKVAAP 487
>gi|46579990|ref|YP_010798.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387153567|ref|YP_005702503.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
gi|61216247|sp|Q72BQ5.1|SYC_DESVH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|46449406|gb|AAS96057.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234011|gb|ADP86865.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
Length = 485
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/484 (45%), Positives = 305/484 (63%), Gaps = 7/484 (1%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YN++SR++EL P V GKV MYVCG+T YDL HIGHAR V FDVL RYLRH G +V +
Sbjct: 3 IYNSLSRRKELFTPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
RNFTDVDDKII RANE G ++ +Y + F++DM L+ L +EP+ + H+ +I
Sbjct: 63 ARNFTDVDDKIIKRANEEGLTSQQVAEKYIDTFYEDMDRLNVLRADIEPKATGHILEMIA 122
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ +++ G AY GDVYF V FPEYG+LSGR ++D R+G RVA K++P DFAL
Sbjct: 123 LCEKLIAKGKAYATPSGDVYFRVRSFPEYGKLSGRDIDDMRSGARVAPGEEKEDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP W SPWG GRPGWHIECSAMS ++ DIHGGG DL+FPHHENEIAQ+
Sbjct: 183 WKAAKPGEPSWTSPWGEGRPGWHIECSAMSEKHMPLPLDIHGGGQDLIFPHHENEIAQTE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA + + YW+HNGFV +D+EKMSKSLGNF TIR ++E Y P LR FL+ HYRSPI+
Sbjct: 243 AALDKPFVRYWMHNGFVQVDAEKMSKSLGNFKTIRDILEGYLPEVLRFFLLTKHYRSPID 302
Query: 377 YSVVQLESASERIFYIYQ--TLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++ ++ A + + IY+ +L E++ S A L P D + F ++
Sbjct: 303 FTFDSMDEAEKSLKRIYEALSLARTERSRSKWSATPL----PADVTAEFDTLDRAFDEAL 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DDL+T L + ++ +N LL + +K A L L L+ + + VLG+
Sbjct: 359 EDDLNTAAALGHVFGTIRLVNRLLEDKNLRKSAETLALLERLDGLVAKWMKVLGVFGREP 418
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L L+E ++R + +V +E+R R K++ ++DAIR +LAA+GI + D+P
Sbjct: 419 EAFLSDLKECRIRRKGIDTTKVDALLEERKSVRAAKDFARADAIRDELAALGIEVRDTPS 478
Query: 555 GTTW 558
G W
Sbjct: 479 GAVW 482
>gi|292491058|ref|YP_003526497.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
gi|291579653|gb|ADE14110.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
Length = 484
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/493 (46%), Positives = 309/493 (62%), Gaps = 21/493 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E P GKV MYVCG+T YDL H+GHARV V FDV+ RYLR G+EV
Sbjct: 2 LRIYNSLTRRKEEFVPIEPGKVRMYVCGMTVYDLCHVGHARVMVVFDVVARYLRASGFEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA+E GE+ L+ RY E H+D L LPP EPR ++ M I
Sbjct: 62 TYVRNITDIDDKIIRRAHERGENIQELTARYIEALHEDAEGLQILPPDREPRATESMEAI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ ++L+ G+AY+ + GD+Y+ V F YG LSG++L++ RAGERV V K +P DF
Sbjct: 122 IAMVQRLLEQGYAYQGENGDIYYDVSHFEGYGALSGKQLDELRAGERVQVSEAKTDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK EP W+SPWGPGRPGWHIECSAMS LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPNEPAWDSPWGPGRPGWHIECSAMSTQALGPHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++YW+HNGFV +D EKMSKSLGNFFT+R+V+E YHP LR F++ +HYRSP
Sbjct: 242 SEAATGCKFVNYWMHNGFVRVDDEKMSKSLGNFFTVREVLEHYHPEVLRYFILSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCE-KALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
+NY+ QLE+A + +Y L + +S+ + ++ D + F F +
Sbjct: 302 LNYTEQQLETAQAAVTRLYTALRGMPGEGISISAQGSAQELAEGD-----DPFVQRFCEA 356
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T LA L N++ H ++ + + L + + ++ +LGL++
Sbjct: 357 MDDDFNTPEALALL-------NEIRHALNRAREEGDKDKVQYLARLLPSLGAILGLLTQE 409
Query: 494 YSEVLLQLREKAL-------KRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVG 546
+ L R+ A A L++ + Q I RT ARKNK++ +D +R L G
Sbjct: 410 PEQFLRDPRQAAAPSIVSAEGEAALSDGDIEQLIAQRTAARKNKDWAAADHLRDVLKKQG 469
Query: 547 IALMDSPVGTTWR 559
I L D+P GT WR
Sbjct: 470 ITLEDTPTGTLWR 482
>gi|39998454|ref|NP_954405.1| cysteinyl-tRNA ligase [Geobacter sulfurreducens PCA]
gi|61216254|sp|Q747A2.1|SYC_GEOSL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|39985401|gb|AAR36755.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens PCA]
Length = 481
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/484 (46%), Positives = 307/484 (63%), Gaps = 7/484 (1%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S +E G+V MYVCGVT YD HIGHAR V FD++YRYLRH GYEV
Sbjct: 3 LRVYNTLSGTKEDFVTLEPGRVKMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGYEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN+TDVDDKII RAN+ G +S R+ EF +DM L P+ +P+ ++H+ +
Sbjct: 63 TYVRNYTDVDDKIINRANKEGVPFNVISERFIAEFDRDMAALGLDLPTYQPKATEHIAEM 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I +I +++ GFAY DGDVYFSV+ F +Y +LS R LE+ +AG R+ V +K++P DFA
Sbjct: 123 IQVIERLVAKGFAYAADGDVYFSVEAFDQYLKLSKRNLEEMQAGARIEVGEKKRHPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK +K GEP+W+SPWG GRPGWHIECSAMS YLG +FDIHGGG DLVFPHHENEIAQS
Sbjct: 183 LWKGSKPGEPYWDSPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA YWIHNGFV I++EKMSKSLGNFFTI++V+E Y LR FL+ HYRSPI
Sbjct: 243 EAANGKPFARYWIHNGFVNINAEKMSKSLGNFFTIKEVLESYDAEVLRFFLLSAHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
++S L+ A+ + IY L ++A++ A + I + F +M
Sbjct: 303 DFSDQNLKEAAAGLERIYNALAGIDEAVAADGTGAGR--IDEELAEKAAGLPTRFREAMD 360
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T L + D ++ +N +L + + LA+ + I V VLGL ++
Sbjct: 361 DDFNTAQALGYVFDLVRAVNRVLAEGEIDRAV-----LASAREAIDRVGAVLGLFTSEPG 415
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
+ +L+ + + ++ + IE+R ARK +++ ++D IR LAA GI L+DS G
Sbjct: 416 AFVERLKSRKAAALPIEAAEIERLIEERNAARKARDFRRADEIRDTLAAQGILLLDSAQG 475
Query: 556 TTWR 559
TTW+
Sbjct: 476 TTWK 479
>gi|227824943|ref|ZP_03989775.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
gi|226905442|gb|EEH91360.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
Length = 483
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/489 (47%), Positives = 320/489 (65%), Gaps = 20/489 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNTM+RK+E P GKVG+YVCGVTPY+ HIG+AR +V +DV++R+L H GY+V +
Sbjct: 6 VYNTMTRKKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDVIHRFLEHEGYDVTH 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII AN+ G ++ RY + + + M LH V PRVSDH+P II
Sbjct: 66 VQNFTDVDDKIIREANKEGVTWDVIANRYIKAYFEVMDKLHVRRAHVYPRVSDHIPDIIH 125
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ Q++D+G+ Y VDGDVY+ V+KF YG+LSGR L+D AG RV VD RK+NP DFALW
Sbjct: 126 TVQQLIDHGYGYVVDGDVYYRVEKFEHYGELSGRTLDDMMAGARVDVDERKENPMDFALW 185
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS-C 316
KSAK GEP W+SPWG GRPGWHIECS MS YLG SFD HGGG DL+FPHHENEIAQS
Sbjct: 186 KSAKPGEPSWDSPWGKGRPGWHIECSTMSTKYLGSSFDFHGGGSDLIFPHHENEIAQSEG 245
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A C + + YW+HNGF+TI+ EKMSKSLGNFFT+ +++ Y P LR F++ THYRSP++
Sbjct: 246 ATCCHPFVRYWVHNGFITINEEKMSKSLGNFFTVLDILKEYEPEVLRYFILQTHYRSPLD 305
Query: 377 YSVVQLESAS---ERIFYIYQTLHDCEKALSL---LDAAALKDSIPPDTVTSINKFHNDF 430
+S +L+ AS ER+ Q L + + +S+ D+ AL++ ++ F F
Sbjct: 306 FSDARLKEASRSLERLRTAAQNLTELKGVISVGPDEDSLALRE--------KVSGFVESF 357
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
L +M DD +T++ ++ L K IN L + Q + + ++K + + +++G++
Sbjct: 358 LEAMRDDFNTSLAISYLFALGKEINILHQSVMTGGQKPDGKLVDMMDKAWKEMTSIIGIL 417
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
E + +A+K AD + I +R ARK K+++K+DAIR +LA GI L
Sbjct: 418 -----EEDPGAKTEAVKDADEDAAAIESLIAERQEARKAKDFKKADAIRDELAQKGILLE 472
Query: 551 DSPVGTTWR 559
D+P G W+
Sbjct: 473 DTPQGVRWK 481
>gi|409913806|ref|YP_006892271.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens KN400]
gi|307635173|gb|ADI86121.2| cysteinyl-tRNA synthetase [Geobacter sulfurreducens KN400]
Length = 481
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/484 (46%), Positives = 307/484 (63%), Gaps = 7/484 (1%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S +E G+V MYVCGVT YD HIGHAR V FD++YRYLRH GYEV
Sbjct: 3 LRVYNTLSGTKEDFVTLEPGRVKMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGYEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN+TDVDDKII RAN+ G +S R+ EF +DM L P+ +P+ ++H+ +
Sbjct: 63 TYVRNYTDVDDKIINRANKEGVPFNVISERFIAEFDRDMAALGLDLPTYQPKATEHIAEM 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I +I +++ GFAY DGDVYFSV+ F +Y +LS R LE+ +AG R+ V +K++P DFA
Sbjct: 123 IQVIERLVAKGFAYAADGDVYFSVEAFDQYLKLSKRNLEEMQAGARIEVGEKKRHPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK +K GEP+W+SPWG GRPGWHIECSAMS YLG +FDIHGGG DLVFPHHENEIAQS
Sbjct: 183 LWKGSKPGEPYWDSPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA YWIHNGFV I++EKMSKSLGNFFTI++V+E Y LR FL+ HYRSPI
Sbjct: 243 EAANGKPFARYWIHNGFVNINAEKMSKSLGNFFTIKEVLESYDAEVLRFFLLSAHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
++S L+ A+ + IY L ++A++ A + I + F +M
Sbjct: 303 DFSDQNLKEAAAGLERIYNALAGIDEAVAADGTGAGR--IDEELAEKAAGLPTRFREAMD 360
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T L + D ++ +N +L + + LA+ + I V VLGL ++
Sbjct: 361 DDFNTAQALGYVFDLVRAVNRVLAEGEIDRAV-----LASAREAIDRVGAVLGLFTSEPG 415
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
+ +L+ + + ++ + IE+R ARK +++ ++D IR LAA GI L+DS G
Sbjct: 416 AFVERLKSRKAAALPIEAAEIERLIEERNAARKAQDFRRADEIRDTLAAQGILLLDSAQG 475
Query: 556 TTWR 559
TTW+
Sbjct: 476 TTWK 479
>gi|333367377|ref|ZP_08459646.1| cysteine--tRNA ligase [Psychrobacter sp. 1501(2011)]
gi|332978776|gb|EGK15466.1| cysteine--tRNA ligase [Psychrobacter sp. 1501(2011)]
Length = 508
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/486 (46%), Positives = 305/486 (62%), Gaps = 6/486 (1%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +Y++M+ + +P GKVGMYVCG+T YD HIGHARV V FDV+ R+LRHLG++V
Sbjct: 25 LKIYDSMTTNKRSFEPLQVGKVGMYVCGMTVYDYCHIGHARVMVAFDVVSRWLRHLGFDV 84
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARANE GE+ L+ R+ H+D L C P EPR + H+ +
Sbjct: 85 NYVRNITDIDDKIIARANENGEEIGQLTERFITAMHEDAAALGCESPDAEPRATQHIDDM 144
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI + AY +GDVY++VD F YG+LS RKLED +AG RV VD+ KKNP DF
Sbjct: 145 LQMIGTLEQKEHAYAASNGDVYYAVDTFEGYGKLSKRKLEDLQAGSRVDVDTDKKNPFDF 204
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W+S WG GRPGWHIECSAMS LG+SFDIHGGG DL FPHHENEIAQ
Sbjct: 205 VLWKAAKAGEPQWDSSWGGGRPGWHIECSAMSTKCLGNSFDIHGGGHDLQFPHHENEIAQ 264
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H GF+ +D EKMSKSLGNFFTIR+VME +HP +R F++ +HYRS
Sbjct: 265 SEAATGCTYANNWMHVGFINVDGEKMSKSLGNFFTIREVMEKFHPETIRFFILSSHYRSQ 324
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTS-INKFHNDFLAS 433
+N+S L+ A + +YQ L E L A + +I ++ S I + +F+ +
Sbjct: 325 VNFSDAALKEAHSGLTRVYQALKAAEAVLDTPVNAQSEATIDTASIDSEIRGYSANFIKA 384
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M+DD +T ++ L K +N L + + +L++ A K + L + + T
Sbjct: 385 MNDDFNTPQAISVLFSLAKEVNKLARETENDQATAKLKAAAVTLKGLAGTLNIGQVKPTE 444
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ LQ ++ +T++Q+ I++R A+ NK + ++D IR L I L DS
Sbjct: 445 F----LQAHIGSVDEEQMTDEQIDTLIQERIDAKANKNFARADEIRNLLQQNNIELEDSK 500
Query: 554 VGTTWR 559
GTTWR
Sbjct: 501 QGTTWR 506
>gi|343172444|gb|AEL98926.1| cysteinyl-tRNA synthetase, partial [Silene latifolia]
Length = 411
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/416 (57%), Positives = 301/416 (72%), Gaps = 20/416 (4%)
Query: 169 EFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQ 227
EF +DM DL CLPPS +P VSDH+ II+MI +++ AY +D GDVYFSVDKF YG
Sbjct: 1 EFLKDMDDLQCLPPSHQPCVSDHIREIIEMIEELIKKDSAYSLDDGDVYFSVDKFERYGL 60
Query: 228 LSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSA 287
LS RKLEDNRAGERV+VD RK+NPADFALWKSAK GE W SPWG GRPGWHIECSAMSA
Sbjct: 61 LSNRKLEDNRAGERVSVDHRKRNPADFALWKSAKPGEISWPSPWGNGRPGWHIECSAMSA 120
Query: 288 AYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNF 347
YL +SFDIHGGG+DL+FPHHENE+AQSCAACN +++ YW+HNGFV I+ EKMSKS GN+
Sbjct: 121 KYLTYSFDIHGGGIDLIFPHHENELAQSCAACNEANVGYWVHNGFVNINGEKMSKSTGNY 180
Query: 348 FTIRQVMELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLD 407
FTIRQV + YHPLA+R FL+ +Y SP+N+S+ Q + AS+ ++ IYQTL DC AL
Sbjct: 181 FTIRQVTDRYHPLAVRYFLLSMNYGSPVNFSLYQTDLASDAVYRIYQTLLDCSDALK--- 237
Query: 408 AAALKDSIPPDTVTSINKFHNDFLAS--------MSDDLHTTVVL-AALSDPLKTINDLL 458
++++ + S K N MSDDLH +L +L + LK+IN+ L
Sbjct: 238 --PFQENVNENAKASSKKPVNLLTLRLLMILRKRMSDDLHIADILKGSLQEALKSINNEL 295
Query: 459 H---TRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG-YSEVLLQLREKALKRADLTED 514
+ ++ +++ + ++SL LE IR VL VLGL+S YSEVL QL+EKAL RA++TED
Sbjct: 296 NGLKKKQKQQKLLAVQSLTELEAEIRYVLEVLGLLSPAPYSEVLHQLKEKALLRAEMTED 355
Query: 515 QVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPALPLALQEQA 570
V Q IE+R +ARKNKE+ KSD IR+ L A GI+LMD P GTTWRP +P +++QA
Sbjct: 356 DVSQLIEERAMARKNKEFLKSDEIRRQLTAKGISLMDLPTGTTWRPCVP-EVEDQA 410
>gi|308273875|emb|CBX30475.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
Length = 478
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/484 (45%), Positives = 304/484 (62%), Gaps = 11/484 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ RK+ +P GKV MYVCG T YD HIGHAR + FDV+ +YL G EV
Sbjct: 3 LRIYNTIERKKVPFEPVQPGKVSMYVCGPTVYDSCHIGHARSVIVFDVILKYLNATGLEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRNFTDVDDKII RA +LG + ++ RY +EF++DM L+ ++EP+ ++H+ I
Sbjct: 63 TYVRNFTDVDDKIINRAVQLGIESHEVAERYIKEFYEDMDALNIKRATIEPKATEHIDKI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I +I +L AYR+DGD+Y+SVDKF +YG+LSGRKLED AG RV +D RK NP DFA
Sbjct: 123 IALIEILLKKEIAYRIDGDIYYSVDKFKDYGKLSGRKLEDMEAGARVEIDERKNNPFDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWKS K GEP+WESPWG GRPGWHIECSAMS+AYLG +FDIHGGG DL+FPHHENEIAQS
Sbjct: 183 LWKSQKPGEPYWESPWGRGRPGWHIECSAMSSAYLGETFDIHGGGKDLIFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A YW+HNGFV I+ EKMSKSLGNF I+ +++ YHP ++RLFL+ HYRSPI
Sbjct: 243 EGAFEKPFAKYWVHNGFVNINHEKMSKSLGNFLLIKDILKSYHPDSVRLFLLSNHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
+++ +E + + IY + E+ + D D + + F SM
Sbjct: 303 DFTDKAMEESEAALDKIYSAIQRVEE---------IADITGKDFINYPEGYWEKFCESMD 353
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T + L D ++ IN LL + + + ++ IR + V+G++S
Sbjct: 354 DDFNTAKGIGYLFDSVRHINRLLDENSNSDEIKTI--INSIYADIRKMGDVIGILSEPAE 411
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
+ + K ++ D+ + ++ R ARK K+++K+D IR L+ + + + D P G
Sbjct: 412 IYFNKKKTKFIETKDVDPSLIDALVKQRFEARKAKDWKKADRIRDKLSGIDVIIEDKPEG 471
Query: 556 TTWR 559
+ W+
Sbjct: 472 SIWK 475
>gi|342215232|ref|ZP_08707886.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 780 str. F0422]
gi|341588729|gb|EGS32105.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 780 str. F0422]
Length = 482
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/495 (46%), Positives = 321/495 (64%), Gaps = 29/495 (5%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
+L ++NTM+R++ + +P EG+V +YVCGVTPY+ HIG+AR +VT+D + RYL H+GY+
Sbjct: 3 ELTVFNTMTREKSVFQPVKEGEVSIYVCGVTPYNHPHIGNARPFVTWDTIRRYLSHVGYK 62
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V Y++NFTDVDDKII +N G +S RY + ++ M LH V PRVS HM
Sbjct: 63 VTYIQNFTDVDDKIINTSNGEGVAWNVISDRYIDAYYDVMDALHVRRADVYPRVSTHMEE 122
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
II MIT ++DNG+AY VDGDVY+ V+KF YG+LSGR L+D AG RV VD RK+NP DF
Sbjct: 123 IISMITTLIDNGYAYAVDGDVYYRVEKFEHYGKLSGRTLDDMEAGARVDVDDRKENPMDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK GEPFWESPWG GRPGWHIECSAMS YLG FD HGGG DL+FPHHENEIAQ
Sbjct: 183 ALWKAAKPGEPFWESPWGQGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQ 242
Query: 315 SCAACNNSH--ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
S C+ H + YW+HNGF+TI+ EKMSKSL NFF ++ ++E Y ALR FL+ THYR
Sbjct: 243 S-EGCSEHHPAVRYWVHNGFITINQEKMSKSLNNFFLVKDILEQYSADALRFFLLSTHYR 301
Query: 373 SPINYSVVQLESASERIFYIYQTLHDC-------EKALSLLDAAALKDSIPPDTVTSINK 425
SP+++S +L+ A++ I +QT+ D + L L+AA L + +
Sbjct: 302 SPLDFSDERLDEATKAI-ERFQTVIDNLLYLESRPEGLCELEAAEL--------LKNARN 352
Query: 426 FHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLT 485
+ +F A+MSDD +T + A + K IN + + + ++ +++ + +L
Sbjct: 353 YEEEFEAAMSDDFNTALATAPIYGLAKEINIYYQSVQSCDGTVCHSTIGEVKEIFKMMLD 412
Query: 486 VLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIED-RTVARKNKEYEKSDAIRKDLAA 544
+LGL+ G+ K + ++ +Q+++ I + R AR+ K++ +D+IR +LA
Sbjct: 413 ILGLLEEGW---------KGQETSNEEYNQLMEVILNIRQCAREQKQWGIADSIRDELAN 463
Query: 545 VGIALMDSPVGTTWR 559
+GI + DSP G W+
Sbjct: 464 IGIIIEDSPQGARWK 478
>gi|410464212|ref|ZP_11317669.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409982672|gb|EKO39104.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 485
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/484 (45%), Positives = 301/484 (62%), Gaps = 3/484 (0%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
+ LYNTM+R +E +V GKV MYVCG+T YDL HIGHAR V FDVL RYLRH+G++V
Sbjct: 1 MQLYNTMTRTKEPFVSRVPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHIGFDV 60
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRNFTDVDDKII +AN G ++ RY F++DM L L P+ EP+ ++++ +
Sbjct: 61 TFVRNFTDVDDKIIKKANAEGTTSQEIAERYIATFYEDMDKLGILRPNAEPKATEYIGEM 120
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ +++D+G AYR GDVYF V F YG+LSGR +ED R+G RVA K++P DF
Sbjct: 121 ASLAQRLIDSGHAYRTPSGDVYFRVRSFAGYGKLSGRDVEDMRSGARVAPGEEKEDPLDF 180
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK++K GEP WESP+GPGRPGWH+ECSAMS LG DIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKASKPGEPVWESPFGPGRPGWHLECSAMSEKLLGMPIDIHGGGQDLIFPHHENEIAQ 240
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA YW+HNGFV I++EKMSKSLGNF TIR + Y P LR FL+ + YRSP
Sbjct: 241 SEAAIGGEFCRYWVHNGFVRINTEKMSKSLGNFITIRDIYARYLPEVLRFFLLSSQYRSP 300
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YS L+ A + I IY E+AL+ + K +P D +++ F A+M
Sbjct: 301 LDYSDQGLDEAEKGIKRIYTAKVQMEQALARAKWSETK--LPADVTEELSRHEEGFTAAM 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DDL+T + + ++ L+ + K E L + V+G+ T
Sbjct: 359 DDDLNTAQAMGHVFGLVRLAGRLMEDKTLVKSRETAEVLRRILANFAVWAEVIGVFGTDA 418
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L +L+ L R + +V + +R ARK K++ +SDAIR +LA +G+ +MD+P
Sbjct: 419 AAFLAELKACRLTRLGIDATRVDALVAERQDARKAKDFARSDAIRDELAVLGVTVMDTPT 478
Query: 555 GTTW 558
G W
Sbjct: 479 GPQW 482
>gi|239906952|ref|YP_002953693.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
gi|259511829|sp|C4XSW5.1|SYC_DESMR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|239796818|dbj|BAH75807.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
Length = 485
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/484 (46%), Positives = 300/484 (61%), Gaps = 3/484 (0%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
+ LYNTM+R +E +V GKV MYVCG+T YDL HIGHAR V FDVL RYLRH+G++V
Sbjct: 1 MQLYNTMTRTKEPFVSRVPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHIGFDV 60
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRNFTDVDDKII +AN G ++ RY F++DM L L P+ EP+ ++++ +
Sbjct: 61 TFVRNFTDVDDKIIKKANAEGTTSQEIAERYIATFYEDMDKLGILRPNAEPKATEYIGEM 120
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ +++D+G AYR GDVYF V F YG+LSGR +ED R+G RVA K++P DF
Sbjct: 121 ASLAQRLIDSGHAYRTPSGDVYFRVRSFAGYGKLSGRDVEDMRSGARVAPGEEKEDPLDF 180
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK++K GEP WESP+GPGRPGWH+ECSAMS LG DIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKASKPGEPVWESPFGPGRPGWHLECSAMSEKLLGMPIDIHGGGQDLIFPHHENEIAQ 240
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA YW+HNGFV I++EKMSKSLGNF TIR + Y P LR FL+ + YRSP
Sbjct: 241 SEAAIGGEFCRYWVHNGFVRINTEKMSKSLGNFITIRDIYARYLPEVLRFFLLSSQYRSP 300
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YS L+ A + I IY E+AL + K +P D +++ F A+M
Sbjct: 301 LDYSDQGLDEAEKGIKRIYAAKVQMEQALGRAKWSETK--LPADVTEELSRHEEGFTAAM 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DDL+T + + ++ L+ + K E L + VLG+ T
Sbjct: 359 DDDLNTAQAMGHVFGLVRLAGRLMEDKTLAKSRETAEVLGRILADFGVWAEVLGVFGTDA 418
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L L+ L R + +V + +R ARK K++ +SDAIR +LA++G+ +MD+P
Sbjct: 419 TAFLADLKACRLTRLGIDAARVDGLVAERQDARKAKDFARSDAIRDELASLGVTVMDTPT 478
Query: 555 GTTW 558
G W
Sbjct: 479 GPQW 482
>gi|117923730|ref|YP_864347.1| cysteinyl-tRNA synthetase [Magnetococcus marinus MC-1]
gi|187629846|sp|A0L4P8.1|SYC_MAGSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|117607486|gb|ABK42941.1| cysteinyl-tRNA synthetase [Magnetococcus marinus MC-1]
Length = 490
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/492 (46%), Positives = 299/492 (60%), Gaps = 17/492 (3%)
Query: 73 STQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLG 132
S + +YNT+ RK+E P + GKVGMYVCGVT YD SHIGHARV V FDV+ R+LR G
Sbjct: 7 SVGITIYNTLGRKKEPFVPMIPGKVGMYVCGVTVYDYSHIGHARVMVVFDVIARHLRVTG 66
Query: 133 YEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHM 192
+++ YVRNFTD+DDKII RANE GE +L++RY + FHQDM L P +EP+ ++H+
Sbjct: 67 FDLTYVRNFTDIDDKIIKRANERGESIQTLTQRYIDAFHQDMAALGVQPADIEPKATEHL 126
Query: 193 PHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
P ++ MI ++D G AY GDVY++V++F YGQLSG+ L++ AG RV VDS K+NP
Sbjct: 127 PEMMQMIGTLMDKGVAYASGGDVYYAVERFANYGQLSGKVLDEQEAGARVEVDSNKQNPM 186
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DF LWK AK EP W+SPWG GRPGWHIECSAM YLG SFDIHGGG DL+FPHHENEI
Sbjct: 187 DFVLWKGAKPEEPQWDSPWGAGRPGWHIECSAMGTKYLGASFDIHGGGRDLIFPHHENEI 246
Query: 313 AQSCAACNNSHISYWIHNGFVTI-----DSEKMSKSLGNFFTIRQVMELYHPLALRLFLI 367
AQ+ ++YWIHNGFV + +SEKMSKSLGNF TIR ++ LY LR F++
Sbjct: 247 AQTEGCTGQHAVNYWIHNGFVNVVNEEGESEKMSKSLGNFHTIRDLLALYPGEVLRFFIL 306
Query: 368 GTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDT-VTSINKF 426
+HYRSP+++S LE+A + IY L + L L + + P D +
Sbjct: 307 NSHYRSPLDFSFSLLEAAKAGLDRIYTALRSAQALLGKLPGTPIGE--PADVPAGAPQDL 364
Query: 427 HNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTV 486
++L +M DD +T +A L + K +N + +K +A + IR +
Sbjct: 365 VENYLKAMDDDFNTPQAIAFLFEAAKMLNTAISEQKDPA------VIATWARLIRGLGHH 418
Query: 487 LGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVG 546
LGL + L R L + + I +R+ AR K + +SD IR LA G
Sbjct: 419 LGLAG---QDPELWFRSGIGAEQGLQAEAIEALIAERSAARAAKNWAESDRIRDTLAQQG 475
Query: 547 IALMDSPVGTTW 558
I L D GT W
Sbjct: 476 IVLEDGQHGTQW 487
>gi|374621461|ref|ZP_09693993.1| cysteinyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
gi|373940594|gb|EHQ51139.1| cysteinyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
Length = 460
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/485 (49%), Positives = 305/485 (62%), Gaps = 29/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R+++ + GKV MYVCG+T YD H+GHARV V FDV+YRYL+ LGYEV
Sbjct: 2 LHIYNTLTRRKDPFQSMEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R+ + H+D L PS EPR + H+ I
Sbjct: 62 TYVRNITDIDDKIIRRAAENGESIEALTDRFIQAMHEDADALGVARPSFEPRATAHIHDI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI +L GFAY D GDVY+SV F YG+LSG+++ED RAGERVA D K++P DF
Sbjct: 122 LHMIGTLLRRGFAYVGDNGDVYYSVSLFDGYGKLSGKRIEDLRAGERVAPDESKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W+SPWGPGRPGWHIECSAMS YLGH FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTHYLGHHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +++YW+HNGFV ++ EKMSKSLGNFFT+RQV+ Y P +R F++G+HYRSP
Sbjct: 242 SEAASCEHYVNYWMHNGFVRVNEEKMSKSLGNFFTVRQVLAHYRPEEVRYFILGSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L +A + +Y AL+ P + F + F A+M
Sbjct: 302 LNYSDEPLNNARAALNRLY---------------TALRGVAPLPSEGEGAPFRSRFDAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T V L+ L D +N L R + +A LA L + + VL +LG Y
Sbjct: 347 QDDFNTPVALSVLFDIAHEVNRL---RDSQPEAA--GRLAGLLREMGGVLGILGSDPDAY 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D E Q L IE R AR+ K++ ++D IR L G+ L D P
Sbjct: 402 ------LQGGAGEGPDEAEIQTL--IEARLEARRRKDFAEADRIRDVLKEQGVVLEDGPG 453
Query: 555 GTTWR 559
GTTWR
Sbjct: 454 GTTWR 458
>gi|343172442|gb|AEL98925.1| cysteinyl-tRNA synthetase, partial [Silene latifolia]
Length = 411
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/416 (57%), Positives = 301/416 (72%), Gaps = 20/416 (4%)
Query: 169 EFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQ 227
EF +DM DL CLPPS +P VSDH+ II+MI ++++ AY +D GDVYFSVDKF YG
Sbjct: 1 EFLKDMDDLQCLPPSHQPCVSDHIKEIIEMIEELINKDSAYSLDDGDVYFSVDKFERYGL 60
Query: 228 LSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSA 287
LS RKLEDNRAGERV+VD RK+NPADFALWKSAK GE W SPWG GRPGWHIECSAMSA
Sbjct: 61 LSNRKLEDNRAGERVSVDHRKRNPADFALWKSAKPGEISWPSPWGNGRPGWHIECSAMSA 120
Query: 288 AYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNF 347
YL ++FDIHGGG+DL+FPHHENE+AQSCAACN +++ YW+HNGFV I+ EKMSKS GN+
Sbjct: 121 KYLTYAFDIHGGGIDLIFPHHENELAQSCAACNEANVGYWVHNGFVNINGEKMSKSTGNY 180
Query: 348 FTIRQVMELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLD 407
FTIRQV + YHPLA+R FL+ +Y SP+N+S+ Q + AS+ I+ IYQTL DC AL
Sbjct: 181 FTIRQVTDRYHPLAVRYFLLSMNYGSPVNFSLYQTDLASDAIYRIYQTLLDCSDALK--- 237
Query: 408 AAALKDSIPPDTVTSINKFHNDFLAS--------MSDDLHTTVVL-AALSDPLKTINDLL 458
++++ + S K N MSDDLH +L +L + LK+IN L
Sbjct: 238 --PFQENVNENAKASSKKPVNLLTLRLLMILRKRMSDDLHIADILKGSLQEALKSINIEL 295
Query: 459 H---TRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG-YSEVLLQLREKALKRADLTED 514
+ ++ +++ + ++SL LE IR VL VLGL+S YSEVL QL+EKAL RA++TED
Sbjct: 296 NGLKKKQKQQKLLAVQSLTELEAEIRYVLEVLGLLSPAPYSEVLDQLKEKALLRAEMTED 355
Query: 515 QVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPALPLALQEQA 570
V Q IE+R +ARKNKE+ KSD IR+ L A GI+LMD P GTTWRP +P +++QA
Sbjct: 356 DVSQLIEERAMARKNKEFLKSDEIRRQLTAKGISLMDLPTGTTWRPCVP-EVEDQA 410
>gi|291279235|ref|YP_003496070.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
gi|290753937|dbj|BAI80314.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
Length = 481
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/484 (46%), Positives = 308/484 (63%), Gaps = 13/484 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++ K+E P + KV MYVCGVT YD HIGHAR V FD++ RYL + Y+V
Sbjct: 2 LIIFNTLTGKKEEFIPLQDNKVRMYVCGVTVYDYCHIGHARSSVVFDIIRRYLIYKEYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTD+DDKII R+NE L+ ++ +E DM L+ +PP P+ ++ + +
Sbjct: 62 TFVKNFTDIDDKIIKRSNEENIHWKELTEKFIKEHDYDMEKLNIMPPDFTPKATEFIDEM 121
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I + ++++ G+AY VDGDVY+ V+KF +YG+LS R L++ AG RV VD RK+NP DFA
Sbjct: 122 IKLCEKLIEKGYAYVVDGDVYYRVEKFKDYGKLSKRNLDELLAGARVEVDERKENPLDFA 181
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK +KE EP+WESPWG GRPGWHIECS MSA LG FDIHGGG DL+FPHHENEIAQS
Sbjct: 182 LWKKSKENEPYWESPWGKGRPGWHIECSVMSAKLLGIPFDIHGGGKDLIFPHHENEIAQS 241
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA YWIHNGFV I+ EKMSKSLGNFFTIR++++ + P LR FL+ THYRSPI
Sbjct: 242 EAAEEKMFAKYWIHNGFVNINKEKMSKSLGNFFTIREIIKEFDPEVLRFFLLTTHYRSPI 301
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
++S L A + + IY L D E + + + + F +F SM
Sbjct: 302 DFSFDHLVEAEQSLNRIYTFLDDLEHYV----VSKKGKNYLEEANKIFENFKKEFETSMD 357
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD ++ LAA+ D +K IN LL+ + K+ + L K I N VLG+++
Sbjct: 358 DDFNSAKALAAIFDYIKEINRLLNQKVVKETYEEILKLTNNFKKIVN--QVLGIINKTPK 415
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
E ++E +++++IE+RT ARKNK +E +D IR +L ++GI L+D+P G
Sbjct: 416 EWFAS-------NLPISESELIKKIEERTNARKNKNFELADKIRDELESLGIELLDTPTG 468
Query: 556 TTWR 559
T +R
Sbjct: 469 TRYR 472
>gi|401679837|ref|ZP_10811761.1| cysteine--tRNA ligase [Veillonella sp. ACP1]
gi|400218964|gb|EJO49835.1| cysteine--tRNA ligase [Veillonella sp. ACP1]
Length = 482
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/492 (45%), Positives = 314/492 (63%), Gaps = 23/492 (4%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
++ +YNTM+R++E+ P G+ MYVCGVTPY+ HIG+AR +VT+DV+ RY++H+GY+
Sbjct: 3 EITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYK 62
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V YV+NFTDVDDKII +N G ++ RY + + + M L V PRVS H+P
Sbjct: 63 VTYVQNFTDVDDKIINTSNGEGVAWDVIANRYIDSYFEVMDALGVERADVYPRVSTHIPD 122
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+ MI+ ++D GFAY +DGDVYFSV+KF YG+LSGR L+D AG R+ VD RKKNP DF
Sbjct: 123 ILKMISTLIDKGFAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVDGRKKNPMDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK GEPFWESPWG GRPGWHIECSAMS YLG FD HGGG DL+FPHHENEIAQ
Sbjct: 183 ALWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQ 242
Query: 315 SCAACNNSH--ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
S C+ H + YW+HNGF+TI+SEKMSKSL NFF ++ ++E Y P ALR FL+ THYR
Sbjct: 243 S-EGCSGHHPSVKYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYR 301
Query: 373 SPINYSVVQLESAS---ERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHND 429
SP+++S +LE A+ ER+ + L EK +A D+ + ++ +
Sbjct: 302 SPLDFSDERLEEANKSLERLGTAIENLLYLEKC----EAGPCDDA--QRLLEKAKEYEEE 355
Query: 430 FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGL 489
F +MSDD +T + +++ K IN G++ + E++A +++ + + V+G+
Sbjct: 356 FEVAMSDDFNTALATSSMFGLAKEINIYYQAVTGREGVVCQEAIAEVKRIFKFMTEVIGV 415
Query: 490 MSTGYSEVLLQLREKALKRADLTEDQVLQRI--EDRTVARKNKEYEKSDAIRKDLAAVGI 547
+ + + AD E + L + R R+ K++ +D IR LA +GI
Sbjct: 416 LEKAW---------EGNTGADAVEYEQLMDVILSVRQACREQKQWALADCIRDRLAEIGI 466
Query: 548 ALMDSPVGTTWR 559
+ DSP G W+
Sbjct: 467 TIEDSPTGARWK 478
>gi|344940190|ref|ZP_08779478.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
gi|344261382|gb|EGW21653.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
Length = 492
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/486 (47%), Positives = 304/486 (62%), Gaps = 29/486 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++RK+E +P+V GKVGMYVCG+T YD HIGHARV V FD + RY RH GYE+
Sbjct: 32 LKIYNTLTRKKEPFQPRVAGKVGMYVCGMTVYDYCHIGHARVMVVFDTVARYFRHQGYEL 91
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GED L+ R+ + H+D L LPP +EPR + + I
Sbjct: 92 TYVRNITDIDDKIIQRAIENGEDYGKLTERFIDAMHEDERALAVLPPDLEPRATQSIADI 151
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI ++D AY +GDV+++V KF +YG+LSG+ L+D +AGERV VD K+NP DF
Sbjct: 152 ISMIKTLVDKDLAYVGSNGDVFYAVTKFKDYGRLSGKNLDDLQAGERVDVDLAKRNPMDF 211
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK EP W+SPWG GRPGWHIECSAMS LG+ FDIHGGGMDL FPHHENEIAQ
Sbjct: 212 VLWKMAKANEPAWDSPWGLGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQFPHHENEIAQ 271
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A ++ W+HNGFV +D EKMSKSLGNFFT+R+V+ Y P +R F++ +HYRSP
Sbjct: 272 SEGATGEKFVNVWMHNGFVRVDDEKMSKSLGNFFTVREVLNQYKPEIIRFFILSSHYRSP 331
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS QL A + +Y L E AA++++ + F +M
Sbjct: 332 LNYSDEQLNDAKAALTRLYTALRGVETTAE----AAIEEA-----------YKTRFEQAM 376
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T V LA L D + +N K + + + AL T++ + +LG++
Sbjct: 377 DDDFNTPVALAVLFDLARDLN--------KAKELDQQKACALAATLKYLSGLLGILQDDP 428
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L + A+ L E+ V Q+I+ R A+K K++ +D IR DL G+ L DSP
Sbjct: 429 DAFLKGSGDAAV----LGEETVEQQIQARLDAKKAKDWALADKIRNDLKEQGVILEDSPD 484
Query: 555 GTT-WR 559
GTT WR
Sbjct: 485 GTTSWR 490
>gi|345876724|ref|ZP_08828488.1| cobyrinic acid a,c-diamide synthase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344226223|gb|EGV52562.1| cobyrinic acid a,c-diamide synthase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 482
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/487 (47%), Positives = 302/487 (62%), Gaps = 28/487 (5%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
T L +YN ++ ++E KP EG+V MYVCG+T YDL H+GHARV V FDV+YRYL+ +GY
Sbjct: 21 TMLKIYNDLNNRKEEFKPLEEGRVRMYVCGMTVYDLCHLGHARVMVVFDVVYRYLKAMGY 80
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
EV Y+RN TD+DDKII RANE GE ++L+ R+ + H+D L LPP EPR + HM
Sbjct: 81 EVTYIRNITDIDDKIINRANENGEPFMALTERFIQAMHEDATALGVLPPDDEPRATGHMK 140
Query: 194 HIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
I+ MI +++DNG AY V+ GDVY+ V FP+YG+LSG+ ++D +G RV VD K++P
Sbjct: 141 EILVMIQRLIDNGHAYAVENGDVYYDVRSFPDYGKLSGKSIDDLESGARVEVDEIKRDPL 200
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DFALWKSAK GEP W+SPWG GRPGWHIECSAMS LG SFDIHGGG DL FPHHENEI
Sbjct: 201 DFALWKSAKPGEPAWDSPWGQGRPGWHIECSAMSTCALGDSFDIHGGGADLTFPHHENEI 260
Query: 313 AQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
AQS A +S + YW+HNGFV I+ EKMSKSLGNFFT+R++++ Y +R F++ + YR
Sbjct: 261 AQSEGATGHSFVKYWMHNGFVRINDEKMSKSLGNFFTVREILQRYRAEEVRYFILTSQYR 320
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
SP+NY LE+A + Y L L + P I +FH A
Sbjct: 321 SPLNYDEEHLENARAALTRFYTALR------------GLDEVEPAGGEAFIERFH----A 364
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
M DD +T LA L D ++ IN L T K + E +R + VLG++
Sbjct: 365 VMDDDFNTPEALAVLFDMVREINRLRETGAAKAAGLGAE--------LRQLGGVLGILQ- 415
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L+ L++ + I+ R AR K + ++D IR +L A GI L D
Sbjct: 416 --DDPEAYLKGGVGAEGGLSDADIDALIQQRLDARAEKNWAEADRIRDELQAAGILLEDG 473
Query: 553 PVGTTWR 559
P GT+WR
Sbjct: 474 PQGTSWR 480
>gi|345862869|ref|ZP_08815083.1| cysteine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345126211|gb|EGW56077.1| cysteine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 461
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/485 (47%), Positives = 301/485 (62%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN ++ ++E KP EG+V MYVCG+T YDL H+GHARV V FDV+YRYL+ +GYEV
Sbjct: 2 LKIYNDLNNRKEEFKPLEEGRVRMYVCGMTVYDLCHLGHARVMVVFDVVYRYLKAMGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y+RN TD+DDKII RANE GE ++L+ R+ + H+D L LPP EPR + HM I
Sbjct: 62 TYIRNITDIDDKIINRANENGEPFMALTERFIQAMHEDATALGVLPPDDEPRATGHMKEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI +++DNG AY V+ GDVY+ V FP+YG+LSG+ ++D +G RV VD K++P DF
Sbjct: 122 LVMIQRLIDNGHAYAVENGDVYYDVRSFPDYGKLSGKSIDDLESGARVEVDEIKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWKSAK GEP W+SPWG GRPGWHIECSAMS LG SFDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKSAKPGEPAWDSPWGQGRPGWHIECSAMSTCALGDSFDIHGGGADLTFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A +S + YW+HNGFV I+ EKMSKSLGNFFT+R++++ Y +R F++ + YRSP
Sbjct: 242 SEGATGHSFVKYWMHNGFVRINDEKMSKSLGNFFTVREILQRYRAEEVRYFILTSQYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY LE+A + Y L L + P I +FH A M
Sbjct: 302 LNYDEEHLENARAALTRFYTALR------------GLDEVEPAGGEAFIERFH----AVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA L D ++ IN L T K + E +R + VLG++
Sbjct: 346 DDDFNTPEALAVLFDMVREINRLRETGAAKAAGLGAE--------LRQLGGVLGILQ--- 394
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L+ L++ + I+ R AR K + ++D IR +L A GI L D P
Sbjct: 395 DDPEAYLKGGVGAEGGLSDADIDALIQQRLDARAEKNWAEADRIRDELQAAGILLEDGPQ 454
Query: 555 GTTWR 559
GT+WR
Sbjct: 455 GTSWR 459
>gi|429759537|ref|ZP_19292035.1| cysteine--tRNA ligase [Veillonella atypica KON]
gi|429179498|gb|EKY20745.1| cysteine--tRNA ligase [Veillonella atypica KON]
Length = 488
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/492 (45%), Positives = 314/492 (63%), Gaps = 23/492 (4%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
++ +YNTM+R++E+ P G+ MYVCGVTPY+ HIG+AR +VT+DV+ RY++H+GY+
Sbjct: 9 EITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYK 68
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V YV+NFTDVDDKII +N G ++ RY + + + M L V PRVS H+P
Sbjct: 69 VTYVQNFTDVDDKIINTSNGEGVAWDVIANRYIDSYFEVMDALGVERADVYPRVSTHIPD 128
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+ MI ++D G+AY +DGDVYFSV+KF YG+LSGR L+D AG R+ VD RKKNP DF
Sbjct: 129 ILKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVDGRKKNPMDF 188
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK GEPFWESPWG GRPGWHIECSAMS YLG FD HGGG DL+FPHHENEIAQ
Sbjct: 189 ALWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQ 248
Query: 315 SCAACNNSH--ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
S C+ H + YW+HNGF+TI+SEKMSKSL NFF ++ ++E Y P ALR FL+ THYR
Sbjct: 249 S-EGCSGHHPSVKYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYR 307
Query: 373 SPINYSVVQLESAS---ERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHND 429
SP+++S +LE A+ ER+ + L EK +A D+ + ++ +
Sbjct: 308 SPLDFSDERLEEANKSLERLGTAIENLLYLEKC----EAGPCDDA--QRLLEKAKEYEEE 361
Query: 430 FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGL 489
F A+MSDD +T + +++ K IN G++ + +++A +++ + + V+G+
Sbjct: 362 FEAAMSDDFNTALATSSMFGLAKEINIYYQVVTGREGVVCQDAIAEVKRIFKFMTEVIGV 421
Query: 490 MSTGYSEVLLQLREKALKRADLTEDQVLQRI--EDRTVARKNKEYEKSDAIRKDLAAVGI 547
+ + + AD E + L + R R+ K++ +D IR LA +GI
Sbjct: 422 LEKAW---------EGNTGADAVEYEQLMDVILSVRQACREQKQWALADCIRDRLAEIGI 472
Query: 548 ALMDSPVGTTWR 559
+ DSP G W+
Sbjct: 473 TIEDSPAGARWK 484
>gi|303231487|ref|ZP_07318217.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
gi|302513830|gb|EFL55842.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
Length = 482
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/492 (45%), Positives = 314/492 (63%), Gaps = 23/492 (4%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
++ +YNTM+R++E+ P G+ MYVCGVTPY+ HIG+AR +VT+DV+ RY++H+GY+
Sbjct: 3 EITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYK 62
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V YV+NFTDVDDKII +N G ++ RY + + + M L V PRVS H+P
Sbjct: 63 VTYVQNFTDVDDKIINTSNGEGVAWDVIANRYIDSYFEVMDALGVERADVYPRVSTHIPD 122
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+ MI ++D G+AY +DGDVYFSV+KF YG+LSGR L+D AG R+ VD RKKNP DF
Sbjct: 123 ILKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVDGRKKNPMDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK GEPFWESPWG GRPGWHIECSAMS YLG FD HGGG DL+FPHHENEIAQ
Sbjct: 183 ALWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQ 242
Query: 315 SCAACNNSH--ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
S C+ H + YW+HNGF+TI+SEKMSKSL NFF ++ ++E Y P ALR FL+ THYR
Sbjct: 243 S-EGCSGHHPSVKYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYR 301
Query: 373 SPINYSVVQLESAS---ERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHND 429
SP+++S +LE A+ ER+ + L EK +A D+ + ++ +
Sbjct: 302 SPLDFSDERLEEANKSLERLGTAIENLLYLEKC----EAGPCDDA--QRLLEKAKEYEEE 355
Query: 430 FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGL 489
F A+MSDD +T + +++ K IN G++ + +++A +++ + + V+G+
Sbjct: 356 FEAAMSDDFNTALATSSMFGLAKEINIYYQVVTGREGVVCQDAIAEVKRIFKFMTEVIGV 415
Query: 490 MSTGYSEVLLQLREKALKRADLTEDQVLQRI--EDRTVARKNKEYEKSDAIRKDLAAVGI 547
+ + + AD E + L + R R+ K++ +D IR LA +GI
Sbjct: 416 LEKAW---------EGNTGADAAEYEQLMDVILSVRQACREQKQWALADCIRDRLAEIGI 466
Query: 548 ALMDSPVGTTWR 559
+ DSP G W+
Sbjct: 467 TIEDSPAGARWK 478
>gi|303228928|ref|ZP_07315738.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
gi|302516342|gb|EFL58274.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
Length = 482
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/492 (45%), Positives = 314/492 (63%), Gaps = 23/492 (4%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
++ +YNTM+R++E+ P G+ MYVCGVTPY+ HIG+AR +VT+DV+ RY++H+GY+
Sbjct: 3 EITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYK 62
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V YV+NFTDVDDKII +N G ++ RY + + + M L V PRVS H+P
Sbjct: 63 VTYVQNFTDVDDKIINTSNGEGVAWDVIANRYIDSYFEVMDALGVERADVYPRVSTHIPD 122
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+ MI ++D G+AY +DGDVYFSV+KF YG+LSGR L+D AG R+ VD RKKNP DF
Sbjct: 123 ILKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVDGRKKNPMDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK GEPFWESPWG GRPGWHIECSAMS YLG FD HGGG DL+FPHHENEIAQ
Sbjct: 183 ALWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQ 242
Query: 315 SCAACNNSH--ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
S C+ H + YW+HNGF+TI+SEKMSKSL NFF ++ ++E Y P ALR FL+ THYR
Sbjct: 243 S-EGCSGHHPSVKYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYR 301
Query: 373 SPINYSVVQLESAS---ERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHND 429
SP+++S +LE A+ ER+ + L EK +A D+ + ++ +
Sbjct: 302 SPLDFSDERLEEANKSLERLGTAIENLLYLEKC----EAGPCDDA--QRLLEKAKEYEEE 355
Query: 430 FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGL 489
F A+MSDD +T + +++ K IN G++ + +++A +++ + + V+G+
Sbjct: 356 FEAAMSDDFNTALATSSMFGLAKEINIYYQVVTGREGVVCQDAIAEVKRIFKFMTEVIGV 415
Query: 490 MSTGYSEVLLQLREKALKRADLTEDQVLQRI--EDRTVARKNKEYEKSDAIRKDLAAVGI 547
+ + + AD E + L + R R+ K++ +D IR LA +GI
Sbjct: 416 LEKAW---------EGNTGADAAEYEQLMDVILSVRQACREQKQWALADCIRDRLAEIGI 466
Query: 548 ALMDSPVGTTWR 559
+ DSP G W+
Sbjct: 467 TIEDSPTGARWK 478
>gi|238019166|ref|ZP_04599592.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
gi|237863865|gb|EEP65155.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
Length = 497
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/500 (44%), Positives = 317/500 (63%), Gaps = 39/500 (7%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
++ +YNTM+R++E+ P G+ MYVCGVTPY+ HIG+AR +VT+DV+ RY++H+GY+
Sbjct: 18 EITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYK 77
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V YV+NFTDVDDKII +N G +++ RY + + + M L + PRVS H+
Sbjct: 78 VTYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIED 137
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
II MI+ +++ G+AY +DGDVY+SVDKF YG+LSGR L+D AG R+ VD RKKNP DF
Sbjct: 138 IIAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDF 197
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK GEP+WESPWG GRPGWHIECSAMS YLG FD HGGG DL+FPHHENEIAQ
Sbjct: 198 ALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQ 257
Query: 315 SCAACNNSH--ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
S C+ H + YW+HNGF+TI+SEKMSKSL NFF ++ ++E Y P ALR FL+ THYR
Sbjct: 258 S-EGCSGQHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYR 316
Query: 373 SPINYSVVQLESASERIFYIYQTLHD-----------CEKALSLLDAAALKDSIPPDTVT 421
SP+++S +LE A++ + + + + C++A LL+ A
Sbjct: 317 SPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGPCDEAQHLLEKA------------ 364
Query: 422 SINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIR 481
++ +F A+MSDD +T + +++ K IN T G++ + E++A +++ +
Sbjct: 365 --KEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQTVTGREGVVCQEAIAEVKRIFK 422
Query: 482 NVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRI--EDRTVARKNKEYEKSDAIR 539
+ V+G++ + + A+ E + L ++ R R K++ +D IR
Sbjct: 423 FMTEVIGILEKAW---------EGNTGANAAEYEELMQVILSVRQACRDQKQWALADCIR 473
Query: 540 KDLAAVGIALMDSPVGTTWR 559
LA +GI + DSP G W+
Sbjct: 474 DRLAEIGITIEDSPQGARWK 493
>gi|148653067|ref|YP_001280160.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
gi|187629854|sp|A5WEW9.1|SYC_PSYWF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148572151|gb|ABQ94210.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
Length = 505
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/490 (46%), Positives = 306/490 (62%), Gaps = 17/490 (3%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +Y++M+ + +P GK+GMYVCG+T YD HIGHARV V FDV+ R+LRHLGYEV
Sbjct: 25 LKIYDSMTTNKRSFEPLQAGKIGMYVCGMTVYDYCHIGHARVMVAFDVVSRWLRHLGYEV 84
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARANE GE L+ R+ + H+D L C P EPR ++H+ +
Sbjct: 85 NYVRNITDIDDKIIARANENGEPIGELTHRFIKAMHEDAAALGCENPDAEPRATEHIDEM 144
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+DMI + AY +GDVY++VD F YG+LS RKLED +AG RV VD+ KKNP DF
Sbjct: 145 LDMIGTLEQKQHAYAASNGDVYYAVDTFEGYGKLSKRKLEDLQAGSRVDVDTDKKNPFDF 204
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W S WG GRPGWHIECSAMS LG+SFDIHGGG DL FPHHENEIAQ
Sbjct: 205 VLWKAAKAGEPQWASSWGGGRPGWHIECSAMSTKCLGNSFDIHGGGHDLQFPHHENEIAQ 264
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ W+H GF+ +D EKMSKSLGNFFTIR+VM+ +HP +R F++ +HYRS
Sbjct: 265 SEAATGCTYAHNWMHVGFINVDGEKMSKSLGNFFTIREVMQKFHPETIRFFILSSHYRSQ 324
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-----ND 429
+N+S L+ A + IYQ L + L+ +AA +++ SIN H D
Sbjct: 325 VNFSDAALKEAHSGLTRIYQALKAADAVLNTSVSAA-------ESIESINAEHAGTHSAD 377
Query: 430 FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGL 489
F+A+M+DD +T ++ L K +N L +L+ A + + +L + L
Sbjct: 378 FIAAMNDDFNTPQAISVLFSLAKEVNKLARDADDADTQAQLQLQAVQLRALAGILNIGQL 437
Query: 490 MSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
+ LQ + + ++++Q+ I++R ++ NK + ++D IR L GI L
Sbjct: 438 NPAEF----LQAQIGEVAEDQMSDEQIEALIQERLDSKANKNFARADEIRDLLQNSGIEL 493
Query: 550 MDSPVGTTWR 559
D +GTTWR
Sbjct: 494 EDGKLGTTWR 503
>gi|416999202|ref|ZP_11939871.1| cysteine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
gi|333977355|gb|EGL78214.1| cysteine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
Length = 482
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/500 (44%), Positives = 317/500 (63%), Gaps = 39/500 (7%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
++ +YNTM+R++E+ P G+ MYVCGVTPY+ HIG+AR +VT+DV+ RY++H+GY+
Sbjct: 3 EITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYK 62
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V YV+NFTDVDDKII +N G +++ RY + + + M L + PRVS H+
Sbjct: 63 VTYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIED 122
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
II MI+ +++ G+AY +DGDVY+SVDKF YG+LSGR L+D AG R+ VD RKKNP DF
Sbjct: 123 IIAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK GEP+WESPWG GRPGWHIECSAMS YLG FD HGGG DL+FPHHENEIAQ
Sbjct: 183 ALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQ 242
Query: 315 SCAACNNSH--ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
S C+ H + YW+HNGF+TI+SEKMSKSL NFF ++ ++E Y P ALR FL+ THYR
Sbjct: 243 S-EGCSGQHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYR 301
Query: 373 SPINYSVVQLESASERIFYIYQTLHD-----------CEKALSLLDAAALKDSIPPDTVT 421
SP+++S +LE A++ + + + + C++A LL+ A
Sbjct: 302 SPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGPCDEAQHLLEKA------------ 349
Query: 422 SINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIR 481
++ +F A+MSDD +T + +++ K IN T G++ + E++A +++ +
Sbjct: 350 --KEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQTVTGREGVVCQEAIAEVKRIFK 407
Query: 482 NVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRI--EDRTVARKNKEYEKSDAIR 539
+ V+G++ + + A+ E + L ++ R R K++ +D IR
Sbjct: 408 FMTEVIGILEKAW---------EGNTGANAAEYEELMQVILSVRQACRDQKQWALADCIR 458
Query: 540 KDLAAVGIALMDSPVGTTWR 559
LA +GI + DSP G W+
Sbjct: 459 DRLAEIGITIEDSPQGARWK 478
>gi|375084700|ref|ZP_09731560.1| cysteine-tRNA ligase [Megamonas funiformis YIT 11815]
gi|374567947|gb|EHR39145.1| cysteine-tRNA ligase [Megamonas funiformis YIT 11815]
Length = 474
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/488 (45%), Positives = 310/488 (63%), Gaps = 20/488 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++++E KP EG+V +YVCGVTPY+ HIG+AR +VT+DV+ RY HLGY+V
Sbjct: 2 LKVYNTLTKQKEEFKPLKEGQVSIYVCGVTPYNHPHIGNARPFVTWDVIKRYFTHLGYKV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+++NFTDVDDKII AN+ G + +S RY + + M LH + P+VS +P I
Sbjct: 62 KHIQNFTDVDDKIIRTANQEGVNWSDISTRYINSYFEVMDKLHVKHADIYPKVSQTIPEI 121
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
IDMI+ ++D G+AY ++GDVYFSV+KF YG+LSGRKLED AG R+ V+ K NP DFA
Sbjct: 122 IDMISVLIDKGYAYELNGDVYFSVEKFKGYGKLSGRKLEDMMAGARIEVNESKHNPMDFA 181
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+AK GEPFWESPWG GRPGWHIECS MS YLG +FD HGGG DL+FPHHENEIAQS
Sbjct: 182 LWKAAKPGEPFWESPWGNGRPGWHIECSTMSLKYLGKTFDFHGGGSDLIFPHHENEIAQS 241
Query: 316 CAACNNSH--ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
A C + H YW+HNGF+TI+ EKMSKSLGNFFT++++++ Y LR F++ THYRS
Sbjct: 242 QAYCGDDHSFARYWLHNGFITINQEKMSKSLGNFFTVKEILDKYPAEVLRFFIVSTHYRS 301
Query: 374 PINYSVVQLESASERIFYIYQTLHDC-EKALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
P+++S +L+ A+ + + L + E A + DA + + + + +F
Sbjct: 302 PLDFSDARLDEATTSLNRLKNALDNLKELAKNTTDATS-----GEELIAKAKQCKQNFFE 356
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T + +A + D K IN + K +A + + L V M
Sbjct: 357 AMDDDFNTALAIANMFDLSKEINIYYNEVTSGK-------VACSKVAVDTALDVFSEM-- 407
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIED-RTVARKNKEYEKSDAIRKDLAAVGIALMD 551
++++ L E D D ++ I D R ARKNK++ +D IR +L +GI L D
Sbjct: 408 --ADIIGILEEDDNSADDGLVDNLMNLIIDIRQNARKNKDWATADKIRDELKNIGITLED 465
Query: 552 SPVGTTWR 559
SP G W+
Sbjct: 466 SPTGVRWK 473
>gi|347731165|ref|ZP_08864267.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. A2]
gi|347520052|gb|EGY27195.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. A2]
Length = 485
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/487 (45%), Positives = 301/487 (61%), Gaps = 13/487 (2%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++RK+E +P V GKV MYVCG+T YDL HIGHAR V FDVL RYLRH G +V +
Sbjct: 3 LYNTLTRKKEHFEPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
RNFTDVDDKII RAN+ G ++ +Y F++DM L+ L +EPR + H+ +I
Sbjct: 63 ARNFTDVDDKIITRANQEGLSSQEVAEKYIATFYEDMDRLNVLRADIEPRATTHIAEMIS 122
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ ++++ G AY GDVYF V FP YG+LSGR ++D R+G RVA K++P DFAL
Sbjct: 123 LCERLIEQGKAYATPSGDVYFRVRAFPGYGKLSGRDVDDLRSGARVAPGEEKEDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK GEP+WESPWG GRPGWHIECSAMS +L DIHGGG DLVFPHHENEIAQ+
Sbjct: 183 WKGAKPGEPYWESPWGRGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFPHHENEIAQTE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA + YW+HNGFV +++EKMSKSLGNF TIR ++E Y P LR FL+ HYRSPI+
Sbjct: 243 AALGKDFVRYWVHNGFVQVNAEKMSKSLGNFRTIRDILENYLPETLRYFLLTKHYRSPID 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDS-----IPPDTVTSINKFHNDFL 431
++ ++ A + + IY+ AL LL A ++ +P D F
Sbjct: 303 FTFESMDEAEKNLKRIYE-------ALGLLHAELQREKWTSGPLPKDVTEEFEGLRQAFA 355
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M DD++T L + ++ N +L + +K E + R VLG+
Sbjct: 356 DAMEDDMNTAAALGHVFTMVRLANRILDNKGQRKTEGARELFRRVLDEARAWTAVLGVFG 415
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+E L +LR + R + +V + ++ R AR +K++ ++DAIR ++AA+GI + D
Sbjct: 416 RDPAEFLAELRACRVARKSIDPARVEELMQARINARADKDFARADAIRDEIAALGIEVRD 475
Query: 552 SPVGTTW 558
+P G W
Sbjct: 476 TPSGAVW 482
>gi|254492695|ref|ZP_05105866.1| cysteinyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
gi|224462216|gb|EEF78494.1| cysteinyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
Length = 463
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/491 (46%), Positives = 299/491 (60%), Gaps = 34/491 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++N++SR++E KP GKV MYVCG+T YDL H+GHARV V FDV+ RYLR LGY V
Sbjct: 2 LKIHNSLSRQKETFKPITAGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYLRALGYNV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R+ E HQD L L P +EP+ ++ MP I
Sbjct: 62 TYVRNITDIDDKIIKRAAENGETIQALTERFIAEMHQDADALGVLRPDLEPKATESMPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ ++ G AY+ D GDVY+ V KF YG+LSGR+++D RAGER+AV+ K +P DF
Sbjct: 122 LAMVETLIGKGLAYKADNGDVYYDVSKFEAYGKLSGRQVDDLRAGERIAVNEAKTDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AKEGEP WESPWG GRPGWHIECSAMSA LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKEGEPAWESPWGMGRPGWHIECSAMSAHCLGEHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + ++YW+HNGFV ID EKMSKSLGNFFT+R+V+ Y A+R F++ +HYRSP
Sbjct: 242 SEGAHDCQSVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLAQYPAEAVRYFILSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ QLE A + Y +L D E P +F + F +M
Sbjct: 302 LNYAEDQLEQAKAALTRFYTSLRDVEPQ-------------PELNWQDDKEFGSRFAEAM 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L+ ++D + +N L + A L + VLGL
Sbjct: 349 DDDFNTALALSVMADVRQALNKALENNEADLAAYLAGLLLSFGD-------VLGLFQQDA 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGIALM 550
L+ D+ ED I+ +R AR +K + ++D IR L+ +GI +
Sbjct: 402 ETFLV---------GDMAEDSDADAIDALIVERNQARADKNWSRADDIRDQLSEMGIVIE 452
Query: 551 DSPVGTTWRPA 561
D+ T+WR A
Sbjct: 453 DAAGKTSWRRA 463
>gi|327399102|ref|YP_004339971.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
gi|327181731|gb|AEA33912.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
Length = 474
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/492 (46%), Positives = 309/492 (62%), Gaps = 30/492 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ ++ E KP GKVGMYVCGVT YD HIGHAR V FDV+YRYL+ GY+V
Sbjct: 2 LKIYNTLGKRLEEFKPIKNGKVGMYVCGVTVYDNCHIGHARSAVAFDVMYRYLKFKGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTDVDDKII RANE G +++RY E+++DM L+ P VEP+ ++H+ I
Sbjct: 62 TFVKNFTDVDDKIINRANEEGVSCNEIAQRYIGEYYKDMYRLNIAKPEVEPKATEHINEI 121
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I+++ ++ D G+AY V+GDVY+ V+KF +YG+LSG+ +++ ++G RV ++ +K+NP DFA
Sbjct: 122 IELVRKLQDMGYAYEVNGDVYYRVEKFKDYGKLSGKNIDELKSGARVEINDKKENPLDFA 181
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK +KE EP W+SPWG GRPGWHIECSAMS YLG SFDIHGGG DL+FPHHENEIAQS
Sbjct: 182 LWKRSKENEPKWKSPWGEGRPGWHIECSAMSMKYLGESFDIHGGGEDLIFPHHENEIAQS 241
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA YWIHNGFV I+ EKMSKSLGNFFTI+ +++ Y LR FL+ THYRSPI
Sbjct: 242 EAATGKPFARYWIHNGFVRINKEKMSKSLGNFFTIKDILKKYDGQTLRYFLLLTHYRSPI 301
Query: 376 NYSVVQLESASE---RIFYIYQTLHDCE-----KALSLLDAAALKDSIPPDTVTSINKFH 427
++S L++A E R + Q L D E K LL+ LKD +
Sbjct: 302 DFSFEGLDAAKEALNRYYNFIQRLEDTEFEKNGKVDELLE-KRLKDLLAR---------- 350
Query: 428 NDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVL 487
F +M +D + + + +KT N L + + + LE ++ + +VL
Sbjct: 351 --FEEAMDEDFNAPKAIGEVFSVIKTFNQYLDSITEGDKPKKAYKETFLE-SMNKIKSVL 407
Query: 488 GLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGI 547
G+ T + + + D V +RI+ R +ARKNK+YE +D IR +L GI
Sbjct: 408 GVFDTSSASWFIP--------EGIDVDWVEERIKQRALARKNKDYETADKIRDELNGKGI 459
Query: 548 ALMDSPVGTTWR 559
L D+ T W+
Sbjct: 460 ILEDAKEYTRWK 471
>gi|451979646|ref|ZP_21928061.1| Cysteinyl-tRNA synthetase [Nitrospina gracilis 3/211]
gi|451763174|emb|CCQ89258.1| Cysteinyl-tRNA synthetase [Nitrospina gracilis 3/211]
Length = 480
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/483 (45%), Positives = 297/483 (61%), Gaps = 8/483 (1%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++ +E P GKV MYVCGVT YD SH+GHAR + FD LYRYL+H GY+V
Sbjct: 3 LRIFNTLTGNKEEFVPLSPGKVRMYVCGVTVYDYSHVGHARAAIVFDTLYRYLKHAGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRNFTD+DDKII RA E ++ +Y + F++DM L+ P+ EP ++H+ +
Sbjct: 63 TYVRNFTDIDDKIINRAREQNVPWQEVTHKYIDAFYEDMDALNVERPTTEPLATEHIGDM 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I MI ++ G AY +GDVY+SV FPEYG+LS R +ED +AG RV KK+P DFA
Sbjct: 123 IKMIEGLVKAGKAYPAEGDVYYSVKAFPEYGRLSKRNIEDMQAGARVEPGEHKKDPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK +K GEP W+SPWGPGRPGWHIECSAMS LG +FDIHGGG DLVFPHHENEIAQS
Sbjct: 183 LWKKSKPGEPAWDSPWGPGRPGWHIECSAMSYQLLGETFDIHGGGKDLVFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
C + YW+HNGFV I+ EKMSKSLGNFFTIR +++ +HP LRLFL+ HYR PI
Sbjct: 243 CGFTGKPPVRYWVHNGFVNINKEKMSKSLGNFFTIRDILKTFHPEVLRLFLLTNHYRGPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
++S L+ A + + Y+ E A + A + I DT+ S F +M
Sbjct: 303 DFSDQYLKDAEKNLDRFYEFFAQAESAQGSRNGGAAE--IAEDTLRS-QPLLKKFDEAMD 359
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T V LA + + L+ +N L + A ++ T+R+ +LGL
Sbjct: 360 DDFNTAVALADMMEELRRLNKQLGEEGTDRDAFHRDA-----ATLRHAGQLLGLFYRTPE 414
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
E ++R DL ++ Q I +R AR +K++ +D R +L +G+ L D+ G
Sbjct: 415 EYKTEIRALKGGGQDLDVARIEQLIAERQAARSSKDFATADRCRDELQKMGVVLKDTKTG 474
Query: 556 TTW 558
TTW
Sbjct: 475 TTW 477
>gi|387129742|ref|YP_006292632.1| cysteinyl-tRNA synthetase [Methylophaga sp. JAM7]
gi|386271031|gb|AFJ01945.1| Cysteinyl-tRNA synthetase [Methylophaga sp. JAM7]
Length = 464
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/491 (46%), Positives = 298/491 (60%), Gaps = 37/491 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+S+++E+ KP EGKV MYVCG+T YDL H+GHARV V FDV+ RYLR GY+V
Sbjct: 2 LKIHNTLSKEKEVFKPLQEGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYLRASGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ RY E H+D L L P EP+ ++ M I
Sbjct: 62 TYVRNITDIDDKIIKRATENGETIEALTERYIAEMHRDADALGVLKPDYEPKATESMGEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
++M+ ++D G AY D GDVY+ V +FP YG+LSGR + + RAGERVAV+ K +P DF
Sbjct: 122 LEMVQTLIDKGLAYTADNGDVYYDVSEFPSYGKLSGRDVNELRAGERVAVNEAKTDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWG GRPGWHIECSAMSA LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGLGRPGWHIECSAMSANCLGEHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A ++YW+HNGFV ID EKMSKSLGNFFT+R+V+ELY A+R F++ +HYRSP
Sbjct: 242 SEGAHGCQSVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLELYPAEAVRYFILSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV--TSINKFHNDFLA 432
+NY+ QLE A + Y +L + + P + V +F F
Sbjct: 302 LNYAEDQLEQAKAALTRFYTSLREVQ---------------PQEEVRWQEDKEFGPRFKE 346
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T + L+ ++D + +N +G +QA L L+S
Sbjct: 347 AMDDDFNTALALSVMADVRQALNKAFERGQGIEQAAYYAGL---------------LLSF 391
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGIA 548
G L Q A D D I+ +R AR +K + ++D IR L +GI
Sbjct: 392 GDVLGLFQQNADAFLVGDTGSDDEAAEIDALVAERNQARADKNWARADEIRDQLTEMGIV 451
Query: 549 LMDSPVGTTWR 559
L D+ T+WR
Sbjct: 452 LEDAAGKTSWR 462
>gi|322421697|ref|YP_004200920.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
gi|320128084|gb|ADW15644.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
Length = 480
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/485 (45%), Positives = 310/485 (63%), Gaps = 10/485 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++ +E P GKVGMYVCGVT YD HIGHAR V FD++YRYL+ G EV
Sbjct: 3 LRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRYLQAKGLEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN+TD+DDKII RAN G +S R+ +EF DM L P+ +P+ ++H+P I
Sbjct: 63 TYVRNYTDIDDKIINRANRDGVPYNEISERFIKEFDSDMARLMLRIPTFQPKATEHVPEI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I ++ +++D GFAY+ DV++ VD+F Y +LS R LED +AG R+ VD +K++P DFA
Sbjct: 123 IALVQKLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIEVDDKKEHPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK AK GEP+WESPWG GRPGWHIECSAMS +LG + DIHGGG DL+FPHHENEIAQS
Sbjct: 183 LWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA + YW+HNGFV I++EKMSKSLGNFFTI++V+E Y LR FL+ HYRSPI
Sbjct: 243 EAASGKPFVKYWLHNGFVNINAEKMSKSLGNFFTIKEVLERYDAEVLRFFLLSAHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSL-LDAAALKDSIPPDTVTSINKFHNDFLASM 434
++S L+ A + IY+ L ++ L+ D A ++S + S F+ +M
Sbjct: 303 DFSDQNLKEAELGLERIYKALSGIDERLTAGPDHGATEESAELEEKCS--AIATRFIEAM 360
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L + D +++IN L LE L +++ + + LG+ +
Sbjct: 361 DDDFNTAMALGHIFDLVRSINRALPVSP-------LELLKRVKEEVARIAATLGVCDSVP 413
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L +++++ ++ +++ I +R AR++K +++SD IR L I L+D+P
Sbjct: 414 AAFLQRMKDRKTSEMEIPVEEIEALIAERAEARRSKNFKRSDEIRDLLLEKDIVLLDTPQ 473
Query: 555 GTTWR 559
GTTW+
Sbjct: 474 GTTWK 478
>gi|352684343|ref|YP_004896328.1| cysteinyl-tRNA synthetase [Acidaminococcus intestini RyC-MR95]
gi|350278998|gb|AEQ22188.1| cysteinyl-tRNA synthetase [Acidaminococcus intestini RyC-MR95]
Length = 474
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/485 (47%), Positives = 316/485 (65%), Gaps = 20/485 (4%)
Query: 82 MSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNF 141
M+RK+E P GKVG+YVCGVTPY+ HIG+AR +V +DV++R+L H GY+V +V+NF
Sbjct: 1 MTRKKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDVIHRFLEHEGYDVTHVQNF 60
Query: 142 TDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQ 201
TDVDDKII AN+ G ++ RY + + + M LH V PRVSDH+P II + Q
Sbjct: 61 TDVDDKIIREANKEGVTWDVIANRYIKAYFEVMDKLHVRRAHVYPRVSDHIPDIIHTVQQ 120
Query: 202 ILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAK 261
++D+G+ Y VDGDVY+ V+KF YG+LSGR L+D AG RV VD RK+NP DFALWKSAK
Sbjct: 121 LIDHGYGYVVDGDVYYRVEKFEHYGELSGRTLDDMMAGARVDVDERKENPMDFALWKSAK 180
Query: 262 EGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS-CAACN 320
GEP W+SPWG GRPGWHIECS MS YLG SFD HGGG DL+FPHHENEIAQS A C
Sbjct: 181 PGEPSWDSPWGKGRPGWHIECSTMSTKYLGSSFDFHGGGSDLIFPHHENEIAQSEGATCC 240
Query: 321 NSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYSVV 380
+ + YW+HNGF+TI+ EKMSKSLGNFFT+ +++ Y P LR F++ THYRSP+++S
Sbjct: 241 HPFVRYWVHNGFITINEEKMSKSLGNFFTVLDILKEYEPEVLRYFILQTHYRSPLDFSDA 300
Query: 381 QLESAS---ERIFYIYQTLHDCEKALSL---LDAAALKDSIPPDTVTSINKFHNDFLASM 434
+L+ AS ER+ Q L + + +S+ D+ AL++ ++ F FL +M
Sbjct: 301 RLKEASRSLERLRTAAQNLTELKGVISVGPDEDSLALRE--------KVSGFVESFLEAM 352
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T++ ++ L K IN L + Q + + ++K + + +++G++
Sbjct: 353 RDDFNTSLAISYLFALGKEINILHQSVMTGGQKPDGKLVDMMDKAWKEMTSIIGIL---- 408
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E + +A+K AD + I +R ARK K+++K+DAIR +LA GI L D+P
Sbjct: 409 -EEDPGAKTEAVKDADEDAAAIESLIAERQEARKAKDFKKADAIRDELAQKGILLEDTPQ 467
Query: 555 GTTWR 559
G W+
Sbjct: 468 GVRWK 472
>gi|298528309|ref|ZP_07015713.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511961|gb|EFI35863.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 485
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/482 (45%), Positives = 294/482 (60%), Gaps = 3/482 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+ R +E P GKV MYVCG+T YD HIGHAR V FDVL RYLR+LGY V +
Sbjct: 3 IYNTLHRAKEKFVPLEPGKVRMYVCGITAYDYCHIGHARSCVVFDVLVRYLRYLGYHVSF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTDVDDKII RA E G D ++ +Y E F+ DM +L+ L VEPR + H+ +I
Sbjct: 63 VRNFTDVDDKIIKRAEEEGLDSDQVAEKYIEAFYLDMDELNVLKADVEPRATRHIEEMIQ 122
Query: 198 MITQILDNGFAYRVDG-DVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ +LD GFAY G D+YF V + P YGQLSGR +E+ ++G R+A D K++P DFAL
Sbjct: 123 VTKSLLDKGFAYITSGKDIYFRVRRMPRYGQLSGRNIEELQSGSRIAPDEEKEDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP W+SPWG GRPGWH+EC+AMS YLG FDIHGGG DL FPHHENE AQS
Sbjct: 183 WKTAKPGEPSWDSPWGAGRPGWHLECTAMSEKYLGIPFDIHGGGQDLAFPHHENEKAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA + + YW+HNGFV +DSEKMSKSLGNF TIR +M+ +H LR FL+ HYRSP++
Sbjct: 243 AAFDREFVKYWVHNGFVRVDSEKMSKSLGNFITIRDIMKDFHGEVLRFFLLTKHYRSPLD 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS LE + + +Y +K L K P+ + + + +M D
Sbjct: 303 YSDGSLEETEKALKRVYWAKTGLQKELQ--KEKWSKGQGFPEASQELQDLASKWDQAMQD 360
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
DL+T + + ++ N +L + +K E + + + LG+ E
Sbjct: 361 DLNTAEAVGYVFGLVRLANRMLEDKTFRKSEAGKEIIQQMLGMLEGWGDALGVFQRSGEE 420
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L QL+ R D+ V + + R ARK+K++E +D IR++L A GI +MD+P G
Sbjct: 421 FLEQLKLMRCNRLDIDPQTVQEMVLKRQQARKDKDFETADNIREELTAKGIEVMDTPEGP 480
Query: 557 TW 558
W
Sbjct: 481 RW 482
>gi|253702469|ref|YP_003023658.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
gi|259511834|sp|C6E7P0.1|SYC_GEOSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|251777319|gb|ACT19900.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
Length = 480
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/487 (45%), Positives = 305/487 (62%), Gaps = 14/487 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++ +E P GKVGMYVCGVT YD HIGHAR V FD++YR+L G EV
Sbjct: 3 LRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRHLLSKGLEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN+TD+DDKII RAN G +S R+ +EF DM L P+ +P+ ++H+P I
Sbjct: 63 TYVRNYTDIDDKIINRANRDGVAYNEISERFIKEFDNDMARLMLQLPTFQPKATEHIPEI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I+++ +++D GFAY+ DV++ VD+F Y +LS R LED +AG R+ VD RK++P DFA
Sbjct: 123 INLVQKLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIDVDERKEHPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK AK GEP+WESPWG GRPGWHIECSAMS +LG + DIHGGG DL+FPHHENEIAQS
Sbjct: 183 LWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA + YW+HNGFV I+SEKMSKSLGNFFTI++++E Y LR FL+ HYRSPI
Sbjct: 243 EAASGKPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEILESYDAEVLRFFLLSAHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
++S L+ A + IY+ L ++ L+ A D+ + + F F +M
Sbjct: 303 DFSDQNLKEAELGLERIYKALAGIDERLA-SGAHTPADADNTEFAEKVAGFAGRFGDAMD 361
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKT---IRNVLTVLGLMST 492
DD +T + L L D ++ IN L T S LEK + + VLG+ +
Sbjct: 362 DDFNTALALGHLFDLVRVINRELPT----------ASTGLLEKVKAEVAKMAAVLGICDS 411
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L +++++ +++ +++ I +R ARK K +++ D IR L I L+DS
Sbjct: 412 VPAAFLQRMKDRKTSDMEMSAEEIETLIAERAEARKAKNFKRGDEIRDLLLEKNIVLLDS 471
Query: 553 PVGTTWR 559
GTTW+
Sbjct: 472 AQGTTWK 478
>gi|333980492|ref|YP_004518437.1| cysteinyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823973|gb|AEG16636.1| cysteinyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 483
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/487 (45%), Positives = 312/487 (64%), Gaps = 14/487 (2%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P+ G+V MYVCG T Y+ H+G+AR V FD + RY ++ GY V Y
Sbjct: 3 IYNTLTRRKEKFIPRHPGRVDMYVCGPTTYNFIHLGNARPLVFFDTVRRYFQYRGYRVKY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDKII RA E G D ++L+R+Y +E+++D L+ P V PRVS+H+P IID
Sbjct: 63 VQNFTDIDDKIINRAREEGVDALALARKYIDEYYRDAEALNVRPADVHPRVSEHLPEIID 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I+ +++ AY VDGDVYF + FPEYG+LSGR LE+ +AG RV VD RKK+P DFALW
Sbjct: 123 LISTLIEKKAAYVVDGDVYFDISAFPEYGKLSGRTLEEMQAGARVEVDPRKKHPMDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK GEP W+SPWG GRPGWHIECSAM+ YLG++FDIHGGG DLVFPHHENEIAQ+ A
Sbjct: 183 KAAKPGEPAWDSPWGKGRPGWHIECSAMALKYLGNNFDIHGGGFDLVFPHHENEIAQAEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A + YW+HNGF+T++ EKMSKSLGNFF +R++++ + P +R FL+ THYRSP+++
Sbjct: 243 ATGRPFVRYWMHNGFITVNQEKMSKSLGNFFLVREILDRFPPEVVRFFLLSTHYRSPLDF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDT--VTSINKFHNDFLASMS 435
++ +A + ++ +A LD + + P D + ++ K H DF+A+M
Sbjct: 303 DDEKMAAAGRGLERFKNSIRLLTEA---LDRPSREQIEPEDEEFIAALEKHHRDFVAAMD 359
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI---RNVLTVLGLMST 492
DD +T + + + + +N LH G AALEK + R+ VLGL
Sbjct: 360 DDFNTALAVGIWFELAREVNAYLHGTAGSP------CRAALEKAMDLFRSFNEVLGLFRV 413
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ + + K L E + +E R AR K++ +D IR L +GI L D+
Sbjct: 414 DERTGRILIEGRHAKSDGLEEALIELLLEVRQQARAKKDWATADRIRDRLKELGIILEDT 473
Query: 553 PVGTTWR 559
P G W+
Sbjct: 474 PGGVRWK 480
>gi|452852528|ref|YP_007494212.1| Cysteinyl-tRNA synthetase [Desulfovibrio piezophilus]
gi|451896182|emb|CCH49061.1| Cysteinyl-tRNA synthetase [Desulfovibrio piezophilus]
Length = 485
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/482 (44%), Positives = 303/482 (62%), Gaps = 3/482 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++R+++ P E KV MYVCG+T YDL HIGHAR V FDVLYRYLRH G++V +
Sbjct: 3 LYNTLARQKQEFTPIHENKVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLRHKGFDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RNFTD+DDKII RANE+G++ ++ ++ EF+ DM L +EP+ ++H+P +I
Sbjct: 63 IRNFTDIDDKIIKRANEVGKEAGEIAEKFIGEFYVDMDRLSVNRADIEPKCTEHIPEMIA 122
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ +++ AY GDVYF V F +YG+LSGR +++ +G R+A K++P DFAL
Sbjct: 123 LTQHLIETDHAYATPSGDVYFRVRSFEDYGKLSGRNVDELESGARIAPGEEKQDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK GEP WESPWG GRPGWH+ECSAMS Y DIHGGG DL FPHHENEIAQS
Sbjct: 183 WKGAKPGEPSWESPWGQGRPGWHLECSAMSEKYAPLPLDIHGGGQDLSFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA YW+HNGFV I+SEKMSKSLGNFFTIR +++ + P LR FL+ HYRSP++
Sbjct: 243 AATGKPFAKYWVHNGFVQINSEKMSKSLGNFFTIRDILDKFLPETLRYFLLTMHYRSPLD 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
+S LE A + I IY L + + L K P + VT +++ ++ +M D
Sbjct: 303 FSFEALEEAEKGIKRIYSAL--AQADVELAKTQWKKSPFPEELVTELDEIEKHWVEAMED 360
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D++T L + ++ ++ + +K + L + ++ VLG+ +
Sbjct: 361 DMNTAGALGHVFSAIRLTGRIVEDKNLRKSEGGRDMLLRIMDDMKTWGAVLGIFECQPED 420
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L++LR+ R+D+ +V + + R AR NK++EKSDAIR +L A+ + + D+P G
Sbjct: 421 FLVELRDNRAVRSDIDPVRVQKLLGARKEARANKDFEKSDAIRDELMAMKVEVKDTPQGA 480
Query: 557 TW 558
TW
Sbjct: 481 TW 482
>gi|310820623|ref|YP_003952981.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
gi|309393695|gb|ADO71154.1| Cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
Length = 488
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/493 (44%), Positives = 308/493 (62%), Gaps = 6/493 (1%)
Query: 72 ASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHL 131
A + + L+NT++ ++E + G V +YVCG T Y HIG+AR + +FDV+ RYLR+
Sbjct: 2 APSSIALFNTLTMQKEPLVTAEPGVVRLYVCGPTVYSYIHIGNARTFTSFDVVVRYLRYR 61
Query: 132 GYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDH 191
GY V YVRN+TDVDDKII A+E GE+P++L+ R+ + F D LH + P V P+VS+H
Sbjct: 62 GYRVHYVRNYTDVDDKIIKAAHETGEEPVALAGRFVKIFQDDTRALHLVEPDVAPKVSEH 121
Query: 192 MPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNP 251
+P I+ +I ++ G AY GDVYFSV +PEY +LS RKL+D AGERV +K+ P
Sbjct: 122 LPEILRIIETLVAKGVAYESQGDVYFSVSSYPEYAKLSKRKLDDLCAGERVQPGEQKREP 181
Query: 252 ADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
DFALWK+AK GEP W+SPWG GRPGWHIECSAMSA YLG SFDIHGG +DL+FPHHENE
Sbjct: 182 LDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSAKYLGESFDIHGGALDLIFPHHENE 241
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS AA YW+H GF+ I+ KMSKSLGN +R + ALR F + THY
Sbjct: 242 IAQSEAASGKPFAKYWMHCGFLDIEGAKMSKSLGNVVRLRDALTRVDAEALRFFFLSTHY 301
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
R P+++S + + R+ Y Y+TL ++ + D P +F +F
Sbjct: 302 RHPLHFSDKAIADSEYRLEYFYETLRKVDERVGGKDFGQGPLHGEP------GRFLQEFE 355
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A+M DD + L ALS +N+L K +A+ +L AL T+R V +VLGL
Sbjct: 356 AAMDDDFNCPGALGALSGLFGLMNELTDKPPVKDKALVGRTLQALRDTVRKVSSVLGLFE 415
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
++ LL+ R++A+K + QV + + +R ARK+K + ++D +R +L G+ +MD
Sbjct: 416 DDPTQWLLRRRDRAVKERGIDVAQVERLLSERNEARKSKNFAEADRLRSELKGQGVEIMD 475
Query: 552 SPVGTTWRPALPL 564
+ GT+W+ A P+
Sbjct: 476 TVAGTSWKVAAPV 488
>gi|313893308|ref|ZP_07826883.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
gi|313442204|gb|EFR60621.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
Length = 482
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/500 (43%), Positives = 316/500 (63%), Gaps = 39/500 (7%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
++ +YNTM+R++E+ P G+ MYVCGVTPY+ HIG+AR +VT+DV+ RY++H+GY+
Sbjct: 3 EITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYK 62
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V YV+NFTDVDDKII +N G +++ RY + + + M L + PRVS H+
Sbjct: 63 VTYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIED 122
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
II MI+ +++ G+AY +DGDVY+SVDKF YG+LSGR L+D AG R+ VD RKKNP DF
Sbjct: 123 IIAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK GEP+WESPWG GRPGWHIECSAMS YLG FD HGGG DL+FPHHENEIAQ
Sbjct: 183 ALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQ 242
Query: 315 SCAACNNSH--ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
S C+ H + YW+HNGF+TI+SEKMSKSL NFF ++ ++E Y P ALR FL+ THYR
Sbjct: 243 S-EGCSGQHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYR 301
Query: 373 SPINYSVVQLESASERIFYIYQTLHD-----------CEKALSLLDAAALKDSIPPDTVT 421
SP+++S +LE A++ + + + + C++A LL+ A
Sbjct: 302 SPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGPCDEAQRLLEKA------------ 349
Query: 422 SINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIR 481
++ +F A+MSDD +T + +++ K IN G++ + E++A +++ +
Sbjct: 350 --KEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQAVTGREGVVCQEAIAEVKRIFK 407
Query: 482 NVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRI--EDRTVARKNKEYEKSDAIR 539
+ V+G++ + + A+ E + L ++ R R K++ +D IR
Sbjct: 408 FMTEVIGILEKAW---------EGNTGANAAEYEELMQVILSVRQACRDQKQWGLADCIR 458
Query: 540 KDLAAVGIALMDSPVGTTWR 559
L+ +GI + DSP G W+
Sbjct: 459 DRLSEIGITIEDSPQGARWK 478
>gi|206890680|ref|YP_002249765.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226735066|sp|B5YID4.1|SYC_THEYD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|206742618|gb|ACI21675.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 487
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/493 (45%), Positives = 323/493 (65%), Gaps = 23/493 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
++NT++ K E KP + KVG+Y CGVT YDL HIGHAR V FDV+ +YLR+ GYEV +
Sbjct: 3 VFNTLTDKLEEFKPINDKKVGIYACGVTVYDLCHIGHARSAVVFDVIVKYLRYKGYEVKF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDKII RAN+ G ++ +Y E+++DM L +EP+ ++H+ +I+
Sbjct: 63 VKNFTDIDDKIINRANKEGVSWKEIAEKYTGEYYKDMDRLGITRADIEPKATEHINEMIE 122
Query: 198 MITQILDNGFAYRVD----GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPAD 253
+I +++ G+AY ++ VYFSV+KFP+YG+LS +K+++ +G RV VD RKK+P D
Sbjct: 123 IIQTLINKGYAYEIEEGQAKSVYFSVEKFPQYGKLSKKKIDELISGARVEVDERKKSPLD 182
Query: 254 FALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIA 313
FALWK++K GEP+W+SPWG GRPGWHIECSAMS YLG +FDIHGGG DL+FPHHENEIA
Sbjct: 183 FALWKASKPGEPWWDSPWGKGRPGWHIECSAMSIKYLGETFDIHGGGADLIFPHHENEIA 242
Query: 314 QSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
QS A YWIHNGFVTI+ EKMSKSLGN IR ++++Y ALRLFL+ +HYRS
Sbjct: 243 QSEAFTGKPFAKYWIHNGFVTINKEKMSKSLGNVLNIRDLLDIYDAEALRLFLLSSHYRS 302
Query: 374 PINYS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTS-INKFHND 429
PI ++ + + E+ +R++ + D EK + + D K SI D V + + +
Sbjct: 303 PIEFAHEYIKEAEATVDRVYSTIMRIEDFEK-IEIND----KSSIEFDKVKAMLENLKPE 357
Query: 430 FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGL 489
F +M DD +T L L + +K IN + K Q ++ L ++ I+ + +VL L
Sbjct: 358 FEKAMDDDFNTAKALGILFEFIKEINRFMD--KKPSQNKEIDFLVTAKRAIKEIGSVLNL 415
Query: 490 MS---TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVG 546
+ LL++++ A+K E+++ + I++RT ARKNK+++K+D+IR+ L + G
Sbjct: 416 FQRQPVDWYRDLLKVKKIAIK-----EEEINRLIKERTEARKNKDWKKADSIREQLLSKG 470
Query: 547 IALMDSPVGTTWR 559
I L D P T W+
Sbjct: 471 IILEDKPDRTIWK 483
>gi|269798076|ref|YP_003311976.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
gi|269094705|gb|ACZ24696.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
Length = 482
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/500 (43%), Positives = 315/500 (63%), Gaps = 39/500 (7%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
++ +YNTM+R++E+ P G+ MYVCGVTPY+ HIG+AR +VT+DV+ RY++H+GY+
Sbjct: 3 EITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYK 62
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V YV+NFTDVDDKII +N G +++ RY + + + M L + PRVS H+
Sbjct: 63 VTYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIED 122
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
II MI ++D G+AY +DGDVY+SV+KF YG+LSGR L+D AG R+ VD RKKNP DF
Sbjct: 123 IITMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK GEP+WESPWG GRPGWHIECSAMS YLG FD HGGG DL+FPHHENEIAQ
Sbjct: 183 ALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQ 242
Query: 315 SCAACNNSH--ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
S C+ H + YW+HNGF+TI+SEKMSKSL NFF ++ ++E Y P ALR FL+ THYR
Sbjct: 243 S-EGCSGQHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYR 301
Query: 373 SPINYSVVQLESASERIFYIYQTLHD-----------CEKALSLLDAAALKDSIPPDTVT 421
SP+++S +LE A++ + + + + C++A LL+ A
Sbjct: 302 SPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGACDEAQRLLEKA------------ 349
Query: 422 SINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIR 481
++ +F A+MSDD +T + +++ K IN ++ + E++A +++ +
Sbjct: 350 --KEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQAVTSREGVVCQEAIAEVKRIFK 407
Query: 482 NVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRI--EDRTVARKNKEYEKSDAIR 539
+ V+G++ + + A+ E + L ++ R R+ K++ +D IR
Sbjct: 408 FMTDVIGVLEKAW---------EGNTGANAAEYEELMQVILSVRQACREQKQWALADCIR 458
Query: 540 KDLAAVGIALMDSPVGTTWR 559
LA +GI + DSP G W+
Sbjct: 459 DRLAEIGITIEDSPQGARWK 478
>gi|326795514|ref|YP_004313334.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
gi|326546278|gb|ADZ91498.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
Length = 461
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/485 (48%), Positives = 312/485 (64%), Gaps = 30/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++ ++E KP VEGK+GMYVCG T YD HIGHAR ++FDV+ R LRHL Y++
Sbjct: 2 LRIYNTLTGQKEEFKPIVEGKIGMYVCGNTVYDFCHIGHARAMISFDVISRILRHLDYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE P L+ R E +D L LPP EP+ ++ M I
Sbjct: 62 TYVRNITDVDDKIIKRAAENGELPSDLTERMIEAQQEDEKALGNLPPDREPKATEFMQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+MI ++D GFAY+ D GDV++ +F +YG+L+ RKLE+ AG RV V K++PADF
Sbjct: 122 INMIKTLVDKGFAYQSDSGDVFYRASRFTDYGKLNNRKLEEMLAGARVEVTESKEHPADF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK KEGE W+SPWG GRPGWHIECSAMS LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKPVKEGEVHWDSPWGKGRPGWHIECSAMSTNCLGDHFDIHGGGPDLKFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +++YW+H G V +++EKMSKSLGNFFTIR+V++LY+P LR ++ +HYRSP
Sbjct: 242 SEAATGKDYVNYWMHCGAVRVNNEKMSKSLGNFFTIREVLKLYNPEVLRYLMVSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
I+YS Q+L+D + AL L AL+D + S + + F A++
Sbjct: 302 IDYSD--------------QSLNDAKVALERL-YNALRDQSCSEIPES-SDYRTRFTAAL 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRL-ESLAALEKTIRNVLTVLGLMSTG 493
+DD +T V L+ L D ++ +N K K ++ L E+LAA + N+ +VLGL+
Sbjct: 346 NDDFNTPVALSVLFDLVRDLN------KAKTESAELAETLAA---ELTNLASVLGLL--- 393
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
Y + L+ ++ D + + IE+R ARK+K + +SD IR LA GI L+DS
Sbjct: 394 YQDADYFLKNGTFDAEGISADDIEKLIEERKQARKDKNFSRSDEIRDLLAEKGIELLDSR 453
Query: 554 VGTTW 558
GT+W
Sbjct: 454 EGTSW 458
>gi|323703779|ref|ZP_08115417.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
gi|323531248|gb|EGB21149.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
Length = 493
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 305/489 (62%), Gaps = 1/489 (0%)
Query: 71 SASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRH 130
A + +YNT+++ +E P+ +G V MYVCG T Y+ H+G+AR V FD + RY +
Sbjct: 3 GAKKVMEIYNTLTKTKEEFIPRDKGHVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYFLY 62
Query: 131 LGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSD 190
G++V YV+NFTDVDDKII RA E G DP++L+ +Y E+ D L+ L V P+VS+
Sbjct: 63 KGFKVKYVQNFTDVDDKIINRAKEEGMDPLALANKYINEYFVDADALNVLRADVHPKVSE 122
Query: 191 HMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKN 250
H+ IID+I + G AY VDGDVYF+V FPEYG+LSGR LED +AG RV VD RKK+
Sbjct: 123 HIKEIIDLIKLLEQRGHAYAVDGDVYFAVRSFPEYGKLSGRNLEDMQAGARVEVDVRKKD 182
Query: 251 PADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHEN 310
P DFALWK+AK GEP WESPWGPGRPGWHIECSAM+ YLG+SFDIHGGG DL+FPHHEN
Sbjct: 183 PMDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMAQKYLGYSFDIHGGGFDLIFPHHEN 242
Query: 311 EIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTH 370
EIAQS A+C YW+HNGF+TI+ EKMSKSLGNFF +R++++ + P +R FL+ TH
Sbjct: 243 EIAQSEASCGKPFARYWMHNGFITINQEKMSKSLGNFFLVREILDKFPPDVVRWFLLSTH 302
Query: 371 YRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDF 430
YRSP+++ +L+ A + I + +AL D+A + + ++F
Sbjct: 303 YRSPLDFDDEKLQVAGRGLERIKTAVRLLYEALDRPDSAGKEALDAARFKGKLAALRSEF 362
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
+M DD +T + ++ + K IN L+ G + LA +++ VLG++
Sbjct: 363 EQAMDDDFNTALAISVFFELSKEINILVGNLGGVVTPAARQLLADAHALVKDFNYVLGIL 422
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
+ L L E K L + V I+ R AR K++ +DAIR L +GI L
Sbjct: 423 KEDQTSGRLLL-EAPAKDDKLVDALVQLIIKIRQEARGKKDWATADAIRDGLKELGIILE 481
Query: 551 DSPVGTTWR 559
D+P G W+
Sbjct: 482 DTPQGVRWK 490
>gi|197120161|ref|YP_002140588.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
gi|226710842|sp|B5EEK6.1|SYC_GEOBB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|197089521|gb|ACH40792.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
Length = 480
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/488 (45%), Positives = 305/488 (62%), Gaps = 16/488 (3%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++ +E P GKVGMYVCGVT YD HIGHAR V FD++YR+LR G EV
Sbjct: 3 LRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRHLRSKGLEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN+TD+DDKII RAN G +S R+ +EF DM L P+ +P+ ++H+P I
Sbjct: 63 TYVRNYTDIDDKIINRANRDGVPYNEISERFIKEFDNDMARLMLQLPTFQPKATEHIPEI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I ++ ++D GFAY+ DV++ VD+F Y +LS R LED +AG R+ VD RK++P DFA
Sbjct: 123 IALVQTLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIDVDERKEHPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK AK GEP+WESPWG GRPGWHIECSAMS +LG + DIHGGG DL+FPHHENEIAQS
Sbjct: 183 LWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA + YW+HNGFV I+SEKMSKSLGNFFTI++++E Y LR FL+ HYRSPI
Sbjct: 243 EAASGKPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEILESYDAEVLRFFLLSAHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDC-EKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++S L+ A + IY+ L E+ S + A D+ + V + F F +M
Sbjct: 303 DFSDQNLKEAELGLERIYKALAGIYERLASGANTPAGADN--AEFVEKVAGFAGRFGDAM 360
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKT---IRNVLTVLGLMS 491
DD +T + L L D ++ IN L T S LE+ + + VLG+
Sbjct: 361 DDDFNTALALGHLFDLVRVINRELPT----------ASTGLLEQAKAEVAKMAAVLGICD 410
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ + L +++++ +++ +++ I +R ARK K +++ D IR L I L+D
Sbjct: 411 SVPAAFLQRMKDRKTSDIEMSAEEIEALIAERAEARKAKNFKRGDEIRDLLLEKNIVLLD 470
Query: 552 SPVGTTWR 559
S GTTW+
Sbjct: 471 SAQGTTWK 478
>gi|365921978|ref|ZP_09446221.1| cysteine--tRNA ligase [Cardiobacterium valvarum F0432]
gi|364575078|gb|EHM52496.1| cysteine--tRNA ligase [Cardiobacterium valvarum F0432]
Length = 451
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/486 (46%), Positives = 295/486 (60%), Gaps = 40/486 (8%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
+ L YN++SR++E P G+ GMYVCG+T YD HIGHARV V FD + R+LR LGY
Sbjct: 2 SALQFYNSLSRQKEPFHPLHAGRTGMYVCGMTVYDYCHIGHARVMVVFDTIARHLRALGY 61
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
E+ YVRN TD+DDKII RA E GE +L+ R+ H+D L CLPP EPR +D +P
Sbjct: 62 ELHYVRNITDIDDKIIVRAAENGEPIAALTERFTAAMHEDEAALGCLPPDEEPRATDAVP 121
Query: 194 HIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
+I +I ++ G AY D GDVY++V FP YG+L+ R L+D RAGER+AV+ K +P
Sbjct: 122 GMIALIETLIKKGHAYAADNGDVYYAVRSFPGYGKLANRSLDDLRAGERIAVNEAKNDPL 181
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DF LWK+AK GEP W+SPWG GRPGWHIECS MSAA LG FDIHGGGMDL FPHHE EI
Sbjct: 182 DFVLWKAAKPGEPSWDSPWGQGRPGWHIECSVMSAAALGEHFDIHGGGMDLKFPHHECEI 241
Query: 313 AQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
AQS AC + H++YW+HNGFV I+ EKMSKSLGNFFT+R V++ Y LR F++G+HYR
Sbjct: 242 AQSEGACGHQHVNYWLHNGFVQINDEKMSKSLGNFFTVRDVLKHYDGETLRTFILGSHYR 301
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
P+NYS L A + + +Y L D + LD AA+ F
Sbjct: 302 GPLNYSDTALAEAKKMLTRLYTAL-DKQPLDGALDTAAVA----------------AFEE 344
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M+DD++T A L D + IN A L T++ + LG++
Sbjct: 345 AMNDDINTPKAFAVLFDLARRIN---------------SGDAHLAATLKTLGGRLGILQQ 389
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
V L+ L E + RI +R A+ K+Y ++DAIR +LAA GI L D+
Sbjct: 390 A-PAVFLK------GEGSLDEATITARIAERNAAKAAKDYARADAIRNELAAQGIILKDT 442
Query: 553 PVGTTW 558
GT W
Sbjct: 443 AGGTEW 448
>gi|303249127|ref|ZP_07335367.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
gi|302489452|gb|EFL49399.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
Length = 485
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/484 (45%), Positives = 296/484 (61%), Gaps = 3/484 (0%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
+ L+NTM+R +E P KV MYVCG+T YDL HIGHAR V FDVL RYLRHLGY+V
Sbjct: 1 MQLFNTMARAKEPFSPLHPCKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHLGYDV 60
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRNFTDVDDKII +A G ++ RY F++DM L L EPR ++++ +
Sbjct: 61 TFVRNFTDVDDKIIKKAASEGATCAGIAERYIAAFYEDMDKLGILRADAEPRATEYVAAM 120
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
DM ++++ G AYR GDVYF V F +YG+LSGR +ED RAG RVA K++P DF
Sbjct: 121 ADMAERLIETGHAYRTPSGDVYFRVRSFADYGKLSGRDIEDMRAGARVAPGDEKEDPLDF 180
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK++K GEP WESP+GPGRPGWH+ECS MS LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKASKPGEPVWESPFGPGRPGWHLECSVMSEKLLGIPFDIHGGGQDLIFPHHENEIAQ 240
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +W+HNGFV I++EKMSKSLGNF TIR + + Y P LR FL+ +HYRSP
Sbjct: 241 SEAATGKEFCRFWVHNGFVRINTEKMSKSLGNFITIRDIYKRYLPEVLRFFLVASHYRSP 300
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YS L+ A + I +Y E+AL+ + K +P + + + F+A+M
Sbjct: 301 LDYSDQALDEAEKGIKRLYAAKGQMEQALTRAKWSGTK--LPAEIAEELARHEQGFIAAM 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L + ++ LL + K A + L + +LG+
Sbjct: 359 DDDCNTAQALGHVFGAVRLAGRLLEDKTLAKSAETADILRRILADFETWSGILGVCGRDS 418
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E L L+ R + +V + +R ARK K++ +SDAIR +LA +G+ +MD+P
Sbjct: 419 REFLDALKACRAARLGIDPTRVDALVAERQDARKAKDFPRSDAIRDELATLGVTVMDTPT 478
Query: 555 GTTW 558
G W
Sbjct: 479 GPQW 482
>gi|158521678|ref|YP_001529548.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
gi|158510504|gb|ABW67471.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
Length = 479
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/488 (46%), Positives = 306/488 (62%), Gaps = 13/488 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN ++ K+EL P GKVGMYVCG T Y HIGHAR V FDV+ RYLR GY+V
Sbjct: 3 LSIYNVLTGKKELFVPVNPGKVGMYVCGPTVYGPCHIGHARSVVVFDVIARYLRVAGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRNFTDVDDKII RA E G+ ++ +Y EF++DM L +VEP+ ++H+ I
Sbjct: 63 TYVRNFTDVDDKIIHRAAEEGKTSEQIAEKYIAEFYRDMDALFVQRATVEPKATEHIDDI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
+ +I +++ G AY GDV+FSV+ FP YG+LSGRKL+ AG R+ VD RK+NP DF
Sbjct: 123 LAVIQILVNKGVAYEAGGDVFFSVEAFPGYGKLSGRKLDQMEAGARIEVDKRKRNPFDFV 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+ K GEP WESPWG GRPGWHIEC+AMS+ YLG +FDIHGGG DL+FPHHENEIAQS
Sbjct: 183 LWKAEKPGEPSWESPWGRGRPGWHIECTAMSSRYLGQTFDIHGGGKDLIFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA +W+HNGFV I+ EKMSKSL NF I +++E YHP +RLFL+ +HYRSPI
Sbjct: 243 EAAFGREFARFWVHNGFVQINQEKMSKSLNNFKMINEILEAYHPETVRLFLLSSHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
++S + A + +Y L E L + K S P + ++ N F +M
Sbjct: 303 DFSDTSMAEAGAGLDKLYTALGRVEA----LTPSGEKPS--PASDGDAGEYWNSFCQAMD 356
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T +AAL + + IN LL + + ++A +R VLGL +T +
Sbjct: 357 DDFNTARAVAALFETARHINRLLD----QAGDLLTADVSAHYDVMRKSGDVLGLFNTP-A 411
Query: 496 EVLLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V + R++A + D + + R + R ARK K++ K+D +RK L + + L DSP
Sbjct: 412 QVYFEGRKQAAAKKDAVDPAEIDRMVAQRVAARKAKDFAKADQLRKQLTDLNVVLEDSPD 471
Query: 555 G-TTWRPA 561
G TTW+ A
Sbjct: 472 GTTTWKFA 479
>gi|357039770|ref|ZP_09101562.1| cysteinyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
gi|355357576|gb|EHG05349.1| cysteinyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
Length = 485
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/482 (44%), Positives = 308/482 (63%), Gaps = 2/482 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+++K+E + P+ GKV +YVCG T Y+ H+G+AR V FD + RYL++ G+ V Y
Sbjct: 3 IYNTLTKKKEELIPREPGKVAIYVCGPTTYNYIHLGNARPIVVFDTVRRYLKYKGFNVLY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDKII RA E G+D +L+ RY E+ +D L+ L + P+VS H+ II
Sbjct: 63 VQNFTDIDDKIINRAREEGDDHQALAERYINEYFKDADALNVLRADIYPKVSGHITEIIK 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
++ +++ GFAY VDGDVY++V KF YG+LSGR LED +AG RV +D+RK +P DFALW
Sbjct: 123 LVETLVEKGFAYLVDGDVYYNVRKFAGYGKLSGRTLEDMQAGARVEIDTRKNDPMDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
KSAK GEP W+SPWG GRPGWHIECSAM+ YLG +FDIHGGG DL+FPHHENEIAQS A
Sbjct: 183 KSAKPGEPAWDSPWGKGRPGWHIECSAMALKYLGVNFDIHGGGFDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A YW+HNGF+T++ EKMSKSLGNFF +R ++ + P +R +L+GTHYRSP+++
Sbjct: 243 ATGQPFARYWMHNGFITVNQEKMSKSLGNFFLVRDILSEFSPEVVRFYLLGTHYRSPLDF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
+L +A + + I +L ++AL+ A + + P V + + +F +M DD
Sbjct: 303 DDEKLTAAQKGLERIKTSLRLLDEALAGRQAGSAERPDPALAV-RLEEIRIEFEKAMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T + L + + +N L A ++ +L + +VLG+ T
Sbjct: 362 FNTALATGMLFNLAREVNSYLQRSDFPSPAEKIAALQKARQVFLQFNSVLGVFKTSARGE 421
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
L L ++ ++ + ED + IE R AR+NK++ +D +R L +GI L D+P G
Sbjct: 422 FL-LEDEGSEKEKVVEDLIDLIIEIRQTARQNKDWPTADRMRDRLKELGIVLEDTPGGVR 480
Query: 558 WR 559
W+
Sbjct: 481 WK 482
>gi|333922423|ref|YP_004496003.1| cysteinyl-tRNA synthetase [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333747984|gb|AEF93091.1| cysteinyl-tRNA synthetase [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 486
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/482 (46%), Positives = 303/482 (62%), Gaps = 1/482 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+++ +E P+ +G V MYVCG T Y+ H+G+AR V FD + RY + G++V Y
Sbjct: 3 IYNTLTKTKEEFIPRDKGHVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYFLYKGFKVKY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII RA E G DP++L+ +Y E+ D L+ L V P+VS+H+ IID
Sbjct: 63 VQNFTDVDDKIINRAKEEGMDPLALANKYINEYFVDADALNVLRADVHPKVSEHIKEIID 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I + G AY VDGDVYF+V FPEYG+LSGR LED +AG RV VD RKK+P DFALW
Sbjct: 123 LIKLLEQRGHAYAVDGDVYFAVRSFPEYGKLSGRDLEDMQAGARVEVDVRKKDPMDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK GEP WESPWGPGRPGWHIECSAM+ YLG+SFDIHGGG DL+FPHHENEIAQS A
Sbjct: 183 KAAKPGEPSWESPWGPGRPGWHIECSAMAQKYLGYSFDIHGGGFDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+C YW+HNGF+TI+ EKMSKSLGNFF +R++++ + P +R FL+ THYRSP+++
Sbjct: 243 SCGKPFARYWMHNGFITINQEKMSKSLGNFFLVREILDKFPPDVVRWFLLSTHYRSPLDF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
+L+ A + I + +AL D+A + + ++F +M DD
Sbjct: 303 DDEKLQVAGRGLERIKTAVRLLYEALDRPDSAGKEALDAARFKGKLAALRSEFEQAMDDD 362
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T + ++ + K IN L+ G + LA +++ VLG++ +
Sbjct: 363 FNTALAISVFFELSKEINILVGNLGGVVTPAARQLLADAHALVKDFNYVLGILKEDQTSG 422
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
L L E K L + V I+ R AR K++ +DAIR L +GI L D+P G
Sbjct: 423 RLLL-EAPAKDDKLVDALVQLIIKIRQEARGKKDWATADAIRDGLKELGIILEDTPQGVR 481
Query: 558 WR 559
W+
Sbjct: 482 WK 483
>gi|406897287|gb|EKD41287.1| hypothetical protein ACD_73C00777G0001 [uncultured bacterium]
Length = 482
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/482 (44%), Positives = 302/482 (62%), Gaps = 7/482 (1%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L++YNT++R++E KP KVGMYVCGVT YD H+GHAR V FDV+YRYL G++V
Sbjct: 3 LFVYNTLTRQKEEFKPLHAPKVGMYVCGVTVYDECHLGHARALVNFDVIYRYLSFRGFDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRNFTDVDDKII +A + G D S++ +Y FH+D+ L PP++EP+ ++H+ +
Sbjct: 63 TFVRNFTDVDDKIINKAIKEGSDWKSVAEKYIATFHRDVTALGLKPPTIEPKATEHIEEM 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
+ +I + NGFAY GDV++ V + +YG+LSG+K+E+ +G R+ + K +P DFA
Sbjct: 123 LSLIGTLEKNGFAYPAGGDVFYKVRQKNDYGKLSGKKIEELESGARIEILEAKTDPLDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK +K GEP W S WG GRPGWHIECSAMS YLG +FDIHGGG DL FPHHENEIAQS
Sbjct: 183 LWKGSKPGEPSWASHWGEGRPGWHIECSAMSMKYLGETFDIHGGGRDLSFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA YW+HNGFV I++EKMSKSLGNF TIR+++E YHP LRLF++ YRSP+
Sbjct: 243 EAATGKLFAKYWLHNGFVNINAEKMSKSLGNFLTIREMLEKYHPEVLRLFILAAQYRSPL 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
+Y+ + +A + + Y T +K L+ D D + N+F +M
Sbjct: 303 DYTEANINNARQSLIRWYTTTDRIQKECRHLEKT---DDGAKDLEKKVLGLMNEFQEAMD 359
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T V L D ++ N +L T+ QA+ A K + + VLGL
Sbjct: 360 DDFNTAKVTGILFDLVREWNRVLDTKLAVPQAV----CEAFFKNVARISEVLGLFGAKPE 415
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
+ L ++ + + ++ + I DR +ARKNK++ K+D IRK+L G+ + D+P G
Sbjct: 416 DFLNDDKKLQFQSVKIDAAEIEKSIADRNMARKNKDWVKADLIRKELKEHGVEIKDNPDG 475
Query: 556 TT 557
TT
Sbjct: 476 TT 477
>gi|427414123|ref|ZP_18904313.1| cysteine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
gi|425714499|gb|EKU77502.1| cysteine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
Length = 484
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/498 (46%), Positives = 316/498 (63%), Gaps = 39/498 (7%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNTM+R++E+ KP EG+ +YVCGVTPY+ HIG+AR +VT+DV+ RYL H+GY+V Y
Sbjct: 6 VYNTMTREKEVFKPVKEGEAKIYVCGVTPYNHPHIGNARPFVTWDVIRRYLTHVGYKVTY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII +N G +++ RY + + + M LH V PRVS+H+ II
Sbjct: 66 VQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALHVRHADVYPRVSEHIDEIIA 125
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
MI+ +++ GFAY +DGDVY+SV+KF +YG+LSGR L+D AG RV VD RK+NP DFALW
Sbjct: 126 MISTLIEKGFAYELDGDVYYSVEKFEDYGKLSGRTLDDMEAGARVDVDDRKQNPMDFALW 185
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
KSAK GEP+WESPWG GRPGWHIECS MS YLG FD HGGG DL+FPHHENEIAQS
Sbjct: 186 KSAKPGEPYWESPWGNGRPGWHIECSTMSNKYLGEEFDFHGGGSDLIFPHHENEIAQS-E 244
Query: 318 ACNNSH--ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
C H + YW+HNGF+TI+ EKMSKSL NFF ++ +++ Y P ALR FL+ THYRSP+
Sbjct: 245 GCTGHHPSVRYWLHNGFITINQEKMSKSLNNFFLVKDILKEYSPDALRYFLMSTHYRSPL 304
Query: 376 NYSVVQLESAS---ERIFYIYQTL--------HDC-EKALSLLDAAALKDSIPPDTVTSI 423
++S +LE A+ ER+ Q L +C E+A +LLD A
Sbjct: 305 DFSDERLEEANKSLERMTTAIQNLLYLENQEEGECDEEAKALLDNA-------------- 350
Query: 424 NKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNV 483
K+ +F +MSDD +T + A + K IN + + E+LA + + +
Sbjct: 351 RKYAEEFEEAMSDDFNTALAGAPMFGLAKEINIYYQAVQNCNGKVCHETLAEVRNIFKMM 410
Query: 484 LTVLGLMSTGYSEVLLQLREKALKRADLTE-DQVLQRIED-RTVARKNKEYEKSDAIRKD 541
++G +L Q E A E ++++Q I + R AR+ K ++ +DAIR +
Sbjct: 411 TDIIG--------ILEQAWEGPQSGAGAEEYEKLMQVILNVRQNAREQKLWDLADAIRDE 462
Query: 542 LAAVGIALMDSPVGTTWR 559
L +GI + DSP G W+
Sbjct: 463 LGNIGIVIEDSPQGARWK 480
>gi|114777193|ref|ZP_01452204.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
gi|114552338|gb|EAU54821.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
Length = 459
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/485 (46%), Positives = 301/485 (62%), Gaps = 31/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT+ R++E P G +GMYVCGVT YD H+GHARV + FDV+YR+L H G++V
Sbjct: 3 LMLYNTIKREKEAFVPIRPGHIGMYVCGVTVYDYCHVGHARVMIVFDVIYRWLMHSGFDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRNFTDVDDKII RA E G +L+ + FH D L CL P+ EPR + HM +
Sbjct: 63 DYVRNFTDVDDKIIKRAAERGIAIDALTNEMIDAFHADADALGCLRPTHEPRATAHMDAM 122
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +++ AY + GDV ++V F +YGQLSG+K+++ +G RV VD K++P DF
Sbjct: 123 ISMIQALMEKDMAYVSESGDVLYAVRGFSDYGQLSGKKIDELESGSRVDVDQSKRDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK EP W SPWG GRPGWHIECSAMS +LG +FDIHGGGMDL FPHHENEIAQ
Sbjct: 183 VLWKMAKADEPAWASPWGQGRPGWHIECSAMSCGHLGDTFDIHGGGMDLKFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
+ AA YW+HNGFV I++EKMSKSLGNFFTIR+V E YHP LR+F++GTHYRSP
Sbjct: 243 ARAANGGGFARYWLHNGFVNINAEKMSKSLGNFFTIREVTERYHPEVLRMFMLGTHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+++S L+ A + +Y+T C++ S + A + +P + F +M
Sbjct: 303 LDFSDAALDVAKSGLDRLYKTAKRCQE--SGVTGAGGQALLP-----------HHFTTAM 349
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA L D + +N KG +A + +LA + +L
Sbjct: 350 DDDFNTPEALAVLFDTSRALN------KGLNEAQDVTALAGQFTAMSALLG--------- 394
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
++ Q + D+ + IE+R ARKN+++ ++DAIR +L+A GI L DS
Sbjct: 395 --IVQQDTAIWFQSGDVDAAAIEALIEERLQARKNRDFARADAIRNELSAQGIVLEDSAS 452
Query: 555 GTTWR 559
GTTW+
Sbjct: 453 GTTWK 457
>gi|153005356|ref|YP_001379681.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
gi|171769386|sp|A7HDA1.1|SYC_ANADF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|152028929|gb|ABS26697.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
Length = 482
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/481 (48%), Positives = 304/481 (63%), Gaps = 19/481 (3%)
Query: 85 KRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNFTDV 144
KREL +P GK+ Y CG T YD +H+GH R YV +D++ R+LR GYEV YVRNFTDV
Sbjct: 13 KREL-QPIEPGKIRFYACGPTVYDSAHVGHGRSYVVWDLVVRHLRARGYEVRYVRNFTDV 71
Query: 145 DDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQILD 204
DDKII RA E EDP++L+ RY EF +DM L L P V P+VS+H+P I+ MI+ +++
Sbjct: 72 DDKIIRRATERREDPVALAARYAREFDEDMDALGNLRPDVAPKVSEHVPQIVAMISSLVE 131
Query: 205 NGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKEG 263
GFAY +GDVYFSV FP+YG+LS R L+D +G RV K++P DFALWK+AK G
Sbjct: 132 KGFAYAAANGDVYFSVRAFPDYGRLSKRNLDDLLSGARVEPGEAKRDPLDFALWKAAKPG 191
Query: 264 EPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNN-- 321
EP W+SPWG GRPGWHIECSAM+ A+LG D+HGGG DLVFPHH NEIAQS AA +
Sbjct: 192 EPTWDSPWGGGRPGWHIECSAMTLAHLGVPIDLHGGGKDLVFPHHTNEIAQSAAAVGDGR 251
Query: 322 ---SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYS 378
S +W+H+GFV IDSEKMSKSLGNFFT+R V+ + +RLF +GTHYR+PINYS
Sbjct: 252 TAESFCRHWMHHGFVEIDSEKMSKSLGNFFTLRDVLAKFDAEGVRLFYLGTHYRNPINYS 311
Query: 379 VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDDL 438
L A R+ Y Y+TL + AL + P D ++ DD
Sbjct: 312 DAILAEAERRLNYFYETLEKVD---------ALAEGTSP--AGEGGGVVEDARRALDDDF 360
Query: 439 HTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEVL 498
+ VLA L++ N L ++GKK LAA + +R + T LGL+ +E L
Sbjct: 361 NAPQVLAVLAEAFTAAN-ALADKRGKKTPEDRARLAAFARDVREIGTTLGLVQRRPAEAL 419
Query: 499 LQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTW 558
+R +A R + V +I +R AR+ +++ +SDAIR L A G+ALMD P GTTW
Sbjct: 420 RAIRARAAARRGIDPASVEAKIVERAEARRARDFARSDAIRDALLAQGVALMDGPQGTTW 479
Query: 559 R 559
+
Sbjct: 480 K 480
>gi|374300824|ref|YP_005052463.1| cysteinyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
gi|332553760|gb|EGJ50804.1| cysteinyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
Length = 485
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/482 (44%), Positives = 298/482 (61%), Gaps = 3/482 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT+ RK+E +P+V GKV MYVCG+T YDL HIGHAR V FD+L RYLR G EV +
Sbjct: 3 LYNTLRRKKESFEPRVPGKVSMYVCGITAYDLCHIGHARSAVVFDILVRYLRSTGLEVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RNFTDVDDKII RANE G ++ +Y + FH+DM L+ L +EP+ ++H+P ++
Sbjct: 63 IRNFTDVDDKIINRANERGVSSQEIAEKYIKTFHEDMDKLNVLRADIEPKCTEHIPEMLT 122
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ +++ AY+ + GDVYF V F YG+LSGR ++D RAG R+ K++P DFAL
Sbjct: 123 LTGELIAKDRAYKTLSGDVYFRVRAFEPYGKLSGRDIDDLRAGARITPGEAKEDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WKSAK EPFWESPWG GRPGWH+ECSAM+A Y+ DIHGGG DL+FPHHENEIAQ+
Sbjct: 183 WKSAKPNEPFWESPWGKGRPGWHLECSAMAAKYVDLPLDIHGGGQDLIFPHHENEIAQTE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA + +W+HNGFV I+ EKMSKSLGNFFTIR +++ + P LR FL+G HYRSP++
Sbjct: 243 AATDGELARFWVHNGFVQINQEKMSKSLGNFFTIRDILDKFMPEVLRFFLLGQHYRSPLD 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
+S LE A + + IY + +AL K ++P + ++ + +M+D
Sbjct: 303 FSFESLEEAEKGLRRIYAAMGQMREALQKDKWG--KAALPTEITDELSTAEKAWDEAMTD 360
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
DL+T L + ++ ++ + +K + + V G+ + E
Sbjct: 361 DLNTAAALGHVFTAVRLAGRVMDDKAMRKSEGARNFWQRVLDNLARWSQVFGVFYSQPQE 420
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L +LR +R + +V + R AR K++ SDAIR +LAA+G + D+P G
Sbjct: 421 FLDELRACRARRKGIDTAKVEALLTQRQEARAGKDFASSDAIRDELAAMGAEVKDTPQGQ 480
Query: 557 TW 558
TW
Sbjct: 481 TW 482
>gi|262199957|ref|YP_003271166.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
gi|262083304|gb|ACY19273.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
Length = 495
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/498 (45%), Positives = 313/498 (62%), Gaps = 15/498 (3%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
TQ+ LY+++ R++ +P GK +Y+CG TPY +H+GHA + FDV+ R L LG+
Sbjct: 2 TQIRLYDSIRREKVDFEPLQPGKASIYLCGPTPYAPAHLGHAYSAICFDVIRRALSWLGF 61
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
EV +VRN TDV+DKI ARA E GE+P++L+ R+ E++ DM L P +EPRVS H+
Sbjct: 62 EVTFVRNITDVEDKIFARAAENGEEPLALAERFAAEYNADMARFGVLAPDIEPRVSTHIE 121
Query: 194 HIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPAD 253
I+ +I I+DNG AY VDGDVYFSV+ F YGQLSG+ L+D RAG RV VD+RKK PAD
Sbjct: 122 DIVGLIQGIIDNGAAYPVDGDVYFSVEAFKPYGQLSGQSLDDLRAGARVEVDARKKAPAD 181
Query: 254 FALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIA 313
FALWKSAK GE W++PWG GRPGWHIECSAMS +LG +FDIHGGG DLVFPHHENEIA
Sbjct: 182 FALWKSAKPGELAWDAPWGRGRPGWHIECSAMSLRHLGQTFDIHGGGKDLVFPHHENEIA 241
Query: 314 QSCAA-CNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
QS AA ++ YW+HNGF+ EKMSKSLGN F RQ+ + P ALR F + HYR
Sbjct: 242 QSQAAHGEDTFARYWMHNGFLNFSGEKMSKSLGNVFGCRQIADAVGPEALRFFSVSHHYR 301
Query: 373 SPINYSVVQ---------LESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSI 423
SP+N+ V + LE A R+ Y Y TL + L A KD + V
Sbjct: 302 SPVNFEVDEVDGVTVFRDLEVADRRLDYFYSTLRRLDDFL-----ATGKDPGEGEVVPEA 356
Query: 424 NKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNV 483
+K +++DD +T +V+AAL + K N LL K + +R +L L + +R V
Sbjct: 357 DKLVPAAREALADDFNTPIVIAALGEAAKLANKLLDEPKSAPKPVRRRTLQKLARELREV 416
Query: 484 LTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLA 543
+ +G++ + + L + R + + ++ +V +E R ARK K++ +DA+R +
Sbjct: 417 GSAIGVLGSEPAAFLGERRNRLAAKRNIDPAEVATLLEQRAEARKAKDFAAADALRDQIK 476
Query: 544 AVGIALMDSPVGTTWRPA 561
A+G+ ++D+ G W+ A
Sbjct: 477 ALGVEVLDTAHGVDWKIA 494
>gi|258544752|ref|ZP_05704986.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
gi|258520023|gb|EEV88882.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
Length = 473
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/492 (45%), Positives = 298/492 (60%), Gaps = 38/492 (7%)
Query: 69 PASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYL 128
P L YN+++R++E P+ GK+GMYVCG+T YD HIGHARV V FD + R+L
Sbjct: 17 PERFMNALQFYNSLTRQKEAFIPREPGKIGMYVCGMTVYDYCHIGHARVMVVFDTIARHL 76
Query: 129 RHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRV 188
R GY + YVRN TD+DDKIIARA+E GE +L+ R+ H+D L C P VEPR
Sbjct: 77 RASGYALKYVRNITDIDDKIIARAHENGEPIDALTARFITAMHEDEAALGCQRPDVEPRA 136
Query: 189 SDHMPHIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSR 247
+ + +I+++ ++ G AY D GDVY++V FP YG+L+ R L+D RAGER+AV+
Sbjct: 137 TAAVSGMIELVQTLIAKGHAYAADNGDVYYAVRSFPAYGKLANRSLDDLRAGERIAVNEA 196
Query: 248 KKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPH 307
KK+P DF LWK+AK GEP W+SPWG GRPGWHIECS M A LG FDIHGGGMDL FPH
Sbjct: 197 KKDPLDFVLWKAAKPGEPAWDSPWGKGRPGWHIECSVMGAETLGEHFDIHGGGMDLKFPH 256
Query: 308 HENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLI 367
HE EIAQS AC + H++YWIHNGFV ID+EKMSKSLGNFFT+R V++ Y LR F++
Sbjct: 257 HECEIAQSEGACGHPHVNYWIHNGFVQIDNEKMSKSLGNFFTVRDVLKKYDGETLRAFIL 316
Query: 368 GTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH 427
+HYR P+NYS L+ A + + +Y S LD A ++ D V + ++
Sbjct: 317 SSHYRGPLNYSDAALDEAKKALTRLY----------SALDKAPADGAMDADAVAAFDE-- 364
Query: 428 NDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVL 487
+M+DD +T A L D + +N AL T++ + L
Sbjct: 365 -----AMNDDFNTPKAFAVLFDLARRLN---------------SGETALAATLKTLSGRL 404
Query: 488 GLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGI 547
GL+ ++ L K L+E +L RI R A+ K+Y ++DAIR +LAA GI
Sbjct: 405 GLLQQNPADWL-----KGENSGSLSEADILARIHARAEAKAAKDYARADAIRAELAAQGI 459
Query: 548 ALMDSPVGTTWR 559
+ D+ G WR
Sbjct: 460 IIKDTAGGVEWR 471
>gi|445414926|ref|ZP_21434004.1| cysteine--tRNA ligase [Acinetobacter sp. WC-743]
gi|444764053|gb|ELW88381.1| cysteine--tRNA ligase [Acinetobacter sp. WC-743]
Length = 473
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/488 (45%), Positives = 306/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G+ V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVKY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARANE GE +L+ R+ + ++D +L CL P PR +D++ + +
Sbjct: 66 VRNITDIDDKIIARANENGESITALTDRFIQAMNEDAENLGCLHPDEAPRATDYIDQMQN 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V+KF +YG+LSGRKL+D +AG ERV VD KK+P DF
Sbjct: 126 MIGHLVNKGAAYPSANGDVYFEVEKFAKYGRLSGRKLDDMQAGASERVDVDVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ + +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTDEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S L+ A + Y ++ + L L ++ F F +M
Sbjct: 306 VNFSDFALKEAKTTLSRFYHAFKAYQQVYADLSTDVLDET-----------FVERFNIAM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T+ +A L + +K +N + ++ + T+R++ +LGL+
Sbjct: 355 RDDFNTSEAIAVLFEIIKELNRAVKEENAEQATLYY-------STLRHLTNILGLVQYNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L + ++AL L+E + I+ R A+KNK++ ++D IR+ L A G+ L D+
Sbjct: 408 DEFLKSDIGQEALG---LSEADITDFIQQRVDAKKNKDFARADEIRQSLLAQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTIWRRA 472
>gi|218885586|ref|YP_002434907.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226735052|sp|B8DKL0.1|SYC_DESVM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218756540|gb|ACL07439.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 485
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/487 (44%), Positives = 299/487 (61%), Gaps = 13/487 (2%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++RK+E +P V GKV MYVCG+T YDL HIGHAR V FDVL RYLRH G +V +
Sbjct: 3 LYNTLTRKKEHFEPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
RNFTDVDDKII RAN+ G ++ +Y F++DM L+ L +EPR + H+ +I
Sbjct: 63 ARNFTDVDDKIITRANQEGLTSQEVAEKYIATFYEDMDRLNVLRADLEPRATTHIEEMIS 122
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ ++++ AY GDVYF V FP YG+LSGR ++D R+G RVA K++P DFAL
Sbjct: 123 LCVRLIEQDKAYATPSGDVYFRVRAFPGYGKLSGRDVDDLRSGARVAPGEEKEDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEPFWESPWG GRPGWHIECSAMS +L DIHGGG DLVFPHHENEIAQ+
Sbjct: 183 WKAAKPGEPFWESPWGNGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFPHHENEIAQTE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA + YW+HNGFV +++EKMSKSLGNF TIR ++E Y P LR FL+ HYRSPI+
Sbjct: 243 AALGKDFVRYWVHNGFVQVNAEKMSKSLGNFRTIRDILENYLPETLRYFLLTKHYRSPID 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDS-----IPPDTVTSINKFHNDFL 431
++ ++ A + + IY+ AL LL A ++ +P D F
Sbjct: 303 FTFESMDEAEKNLKRIYE-------ALGLLHAELEREKWTSGPLPKDVTEEFEGLRQAFA 355
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M DD++T L + ++ N +L + +K A+ VLG+
Sbjct: 356 DAMEDDMNTAAALGHVFTMVRLANRILDNKGQRKTEGARAFFRAVLDEAATWFAVLGVFG 415
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ L +LR + R + +V + ++ R AR +K++ ++DAIR ++AA+GI + D
Sbjct: 416 REPAGFLAELRACRVARKGIDPAKVEELLQARINARADKDFARADAIRDEIAALGIEVRD 475
Query: 552 SPVGTTW 558
+P G W
Sbjct: 476 TPSGAVW 482
>gi|302834082|ref|XP_002948604.1| hypothetical protein VOLCADRAFT_58337 [Volvox carteri f.
nagariensis]
gi|300266291|gb|EFJ50479.1| hypothetical protein VOLCADRAFT_58337 [Volvox carteri f.
nagariensis]
Length = 509
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/502 (47%), Positives = 321/502 (63%), Gaps = 38/502 (7%)
Query: 78 LYNTMSRKRELVKPKV-EGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRH-LGYEV 135
+NTMS+ +EL +P++ +G+V MYVCGVT YD SHIGHARVYV FDVLYR+L GY+V
Sbjct: 22 FFNTMSKSKELFRPRLADGRVSMYVCGVTVYDYSHIGHARVYVAFDVLYRFLTAACGYDV 81
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRNFTD+DDKIIARA + G DP L+ R+ EF+QDM L+ L P++EPR + +P +
Sbjct: 82 QYVRNFTDIDDKIIARAQQSGVDPSELTERFIREFNQDMAALNVLTPTLEPRATAFVPQM 141
Query: 196 IDMITQILDNGFAYRVDG-DVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I IT I+ +G AY V+G DV+F V YG+LSGR LEDNRAGERVAVD RK++PADF
Sbjct: 142 ISTITAIMQHGHAYAVEGGDVFFDVTSLEGYGRLSGRALEDNRAGERVAVDGRKRSPADF 201
Query: 255 AL-----WKSAKEGEP--FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPH 307
AL + ++G P WG W A S +G + G DLVFPH
Sbjct: 202 ALILVCLGGTGRDGPPGIVIFGGWGFS---WFRCFRAASGFLVGWPQFLRG--RDLVFPH 256
Query: 308 HENEIAQSCAACN--------NSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHP 359
HENE+AQS AAC + YW+HNGFV +DSEKMSKSLGNFFTIR V+ YHP
Sbjct: 257 HENELAQSQAACGYPDQLHNGTDFVRYWLHNGFVNVDSEKMSKSLGNFFTIRDVLSSYHP 316
Query: 360 LALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDT 419
LALR FL+ YR+P+NYS LE AS R++Y+ Q D E A + ++ ++
Sbjct: 317 LALRWFLLAAQYRAPLNYSDKGLEEASSRLYYVIQARADVEPAATSSSSSTSSGAV---- 372
Query: 420 VTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKT 479
++ L++++DDL+T + ALS PL+TINDL+ T+ G+K+ RL LA L
Sbjct: 373 ------LVSEVLSALADDLNTPAAVGALSGPLRTINDLMTTKAGRKRPDRLAVLAQLHVA 426
Query: 480 IRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIR 539
+ V+ +LG+ ++ QL E +L+ A +Q+LQ I+ AR+ K++ +SDAIR
Sbjct: 427 MGVVMELLGMEPNSGTKQQPQL-EGSLEGAAAGLEQLLQLIQ----ARQAKDFARSDAIR 481
Query: 540 KDLAAVGIALMDSPVGTTWRPA 561
+LA+ GI L+D+P GTTWRP
Sbjct: 482 LELASRGILLLDTPKGTTWRPG 503
>gi|345888163|ref|ZP_08839277.1| cysteinyl-tRNA synthetase [Bilophila sp. 4_1_30]
gi|345041019|gb|EGW45221.1| cysteinyl-tRNA synthetase [Bilophila sp. 4_1_30]
Length = 485
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/484 (44%), Positives = 305/484 (63%), Gaps = 3/484 (0%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
+ YNTMSRK+E P +G VG+Y CG+T Y LSHIGHAR V FD+L R LR+ GYEV
Sbjct: 1 MQFYNTMSRKKETFTPVRKGLVGVYACGITAYALSHIGHARSAVAFDILVRLLRYKGYEV 60
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRNFTDVDDKII RAN+ G ++ Y + +H+DM L+ + +EP+ ++H+ +
Sbjct: 61 TFVRNFTDVDDKIIKRANDEGVSSTEIAETYIKAYHEDMDRLNVIRADIEPKATEHIQEM 120
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+++ +++ +G AY GDVYF V FP YG+LSGR +D R+G RV K++P DF
Sbjct: 121 LNLTERLIADGKAYATPSGDVYFRVRSFPGYGKLSGRTPDDLRSGARVVPGDEKEDPLDF 180
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWKSAK GEP+WESPWG GRPGWHIECSAMS Y+ DIHGGG+DL+FPHHENEIAQ
Sbjct: 181 ALWKSAKPGEPYWESPWGKGRPGWHIECSAMSEKYIPLPLDIHGGGLDLIFPHHENEIAQ 240
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
+ AA + W+HNGFV +DSEKMSKSLGNF TIR ++E Y LR FL G HYRSP
Sbjct: 241 TEAALGKPLANIWMHNGFVQVDSEKMSKSLGNFKTIRDILESYLAETLRYFLAGKHYRSP 300
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
I++S+ ++ + +Y+ L + +KAL+ + + P + + + + F+ ++
Sbjct: 301 IDFSLDNMDESERSQKRVYECLREVDKALARENWKP--GAAPAELMEELKQQDQSFMDAL 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD++T + L + ++ +L +K + + L A T+LGL +
Sbjct: 359 EDDVNTAAAMGHLFNMVRIAGRVLEDKKLRNSEGGRDILKAFRDATAKWDTLLGLFAQKP 418
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L LRE +R L ++V++ + +R AR K++ +SDA R +LAA+G+ + D+P
Sbjct: 419 EDFLASLREIRARRRGLDMNKVVELLRERQEARAAKDFARSDAARDELAALGVEVRDTPE 478
Query: 555 GTTW 558
G W
Sbjct: 479 GPVW 482
>gi|296131811|ref|YP_003639058.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
gi|296030389|gb|ADG81157.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
Length = 487
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/489 (44%), Positives = 305/489 (62%), Gaps = 15/489 (3%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT +RK+E P+ GKV MYVCG T Y+L H+G+AR + FD + RY + GY+V Y
Sbjct: 5 LYNTCTRKKEEFIPRQPGKVDMYVCGPTTYNLIHLGNARPLIVFDTVRRYFEYKGYQVTY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDKII RA E DPI+L+ +Y E+ +D L +V PRVS+H+ II+
Sbjct: 65 VQNFTDIDDKIINRAREENTDPITLAAKYIREYFKDAAALGVREATVHPRVSEHLDEIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
MI I+ NG+AY++DGDVYFSV+ F YG+LSGR LED +AG RV VD+RK++P DFALW
Sbjct: 125 MIRGIMKNGYAYQLDGDVYFSVESFKGYGKLSGRSLEDMQAGARVDVDTRKRHPMDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK GEP W+SPWG GRPGWHIECSAM+ YLG FDIHGGG DL+FPHHENEIAQ+ A
Sbjct: 185 KAAKPGEPAWDSPWGKGRPGWHIECSAMANKYLGMGFDIHGGGFDLIFPHHENEIAQAEA 244
Query: 318 -ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A YW+HNGF+T++ EKMSKSLGNFFT+R+++ Y P +R +++ THYRSP++
Sbjct: 245 YAGCGPFARYWMHNGFITVNEEKMSKSLGNFFTVREILAKYDPEVVRFYMLSTHYRSPLD 304
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALK----DSIPPDTVTSINKFHNDFLA 432
+ +LE + + ++ L + E L ++ + D + + K DF
Sbjct: 305 FDDTKLEMNRKSLSRLHNALDNIESILKTNKFGEVENPELEKALADLLRAREKAVRDFEE 364
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T + +A L D + N +H L+ + + + + LG
Sbjct: 365 AMDDDFNTALAIAVLFDLARDSNAFIHAATSAGGDALLQEVKGALQQVFDTFMKLG---- 420
Query: 493 GYSEVLLQLREKALKRADLT-EDQVLQRIED-RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L L EK + D D+++Q I D R+ AR K++ +D IR L +GI +
Sbjct: 421 ----QVLGLFEKRGTQGDTGLVDRLMQIILDIRSEARARKDWATADGIRNKLNELGIIIE 476
Query: 551 DSPVGTTWR 559
DSP G W+
Sbjct: 477 DSPQGARWK 485
>gi|389720629|ref|ZP_10187458.1| cysteinyl-tRNA ligase [Acinetobacter sp. HA]
gi|388609525|gb|EIM38688.1| cysteinyl-tRNA ligase [Acinetobacter sp. HA]
Length = 473
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 304/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG++ +YVCG+T YD HIGHAR V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDLYVCGMTVYDYCHIGHARTVVAFDYIIRFLRSQGWQVKY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE SL+ R+ + ++D L CL P P+ +D++ + +
Sbjct: 66 VRNITDIDDKIIKRANENGESISSLTSRFIDAMNEDFAKLGCLAPDAAPKATDYIDQMQN 125
Query: 198 MITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++NG AY + GDVYF V+KF +YG+LSGRKLED +AG ERV V+ KK+P DF
Sbjct: 126 MIDTLVNNGTAYPANNGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGADLSFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +++YW+H GF+ +D EKMSKSLGNFFTIR V+E +HP +R F++ +HYRSP
Sbjct: 246 SEAATGEQYVNYWMHAGFINVDGEKMSKSLGNFFTIRDVIEKFHPEVVRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS V L+ A + Y + KA + + +++ V N A+M
Sbjct: 306 VNYSDVALKEAKNTLMRFYHSF----KAYQAVYGEQMVETLDQSFVERFN-------AAM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N R K Q E A T+R++ +LGL+
Sbjct: 355 CDDFNTPEAIAVLFELNKELN-----RAVKDQNQ--EQAAVYYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L + ++AL L+E Q+ I+ R A+K K + ++D IR+ L G+ L D+
Sbjct: 408 DEFLKSDIGQEALG---LSEAQIEDLIQQRKDAKKEKNFARADEIRQSLLDQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|220934112|ref|YP_002513011.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254781696|sp|B8GNT5.1|SYC_THISH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219995422|gb|ACL72024.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 460
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 296/485 (61%), Gaps = 29/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++N+++R++E P G+V MYVCG+T YD H+GHARV V FDV+YRYL+ LG++V
Sbjct: 2 LQIHNSLTRRKETFTPMEPGRVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGFDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y+RN TD+DDKII RA E GED +L+ R+ H+D L LPPS EPR ++H+ +
Sbjct: 62 TYIRNITDIDDKIIRRAAENGEDIRALTDRFIAAMHEDAEALGVLPPSAEPRATEHIDGM 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI +++ G+AY D GDVY++V KF YG+LSG++LED RAGERVA D K++P DF
Sbjct: 122 LAMIGTLVERGYAYAGDNGDVYYAVAKFEPYGRLSGKRLEDLRAGERVAPDEAKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W+SPWGPGRPGWHIECSAMS YLG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTHYLGNHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++YW+HNGFV ++ EKMSKSLGNFFT+R+V+ Y +R F++ +HYRSP
Sbjct: 242 SEAATCEHFVNYWMHNGFVRVNEEKMSKSLGNFFTVREVLARYPAEVVRYFILSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L++A + +Y L + + +D A + + F A+M
Sbjct: 302 LNYSDEPLDAARAGLTRLYTAL----RGVQAVDPAGQGEG-----------YRRRFQAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T V +A L D + +N L + + G
Sbjct: 347 DDDFNTPVAMAVLFDIARELNRLRDEDPAGAAPLAGLLRELGGMLGLLAGDPEAFLKGGE 406
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ DL E + I R ARK K++ ++D IR +LA G+ L D P
Sbjct: 407 A-------------GDLDEAAIEALIAQRLAARKAKDFAEADRIRDELAGQGVVLEDGPG 453
Query: 555 GTTWR 559
GTTWR
Sbjct: 454 GTTWR 458
>gi|282850303|ref|ZP_06259682.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|294793811|ref|ZP_06758948.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
gi|282579796|gb|EFB85200.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|294455381|gb|EFG23753.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
Length = 482
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/500 (44%), Positives = 313/500 (62%), Gaps = 39/500 (7%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
++ +YNTM+R++E+ P G+ MYVCGVTPY+ HIG+AR +VT+DV+ RY++H+GY+
Sbjct: 3 EITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYK 62
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V YV+NFTDVDDKII +N G +++ RY + + + M L + PRVS H+
Sbjct: 63 VTYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIDD 122
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
II MI ++D G+AY +DGDVY+SV+KF YG+LSGR L+D AG R+ VD RKKNP DF
Sbjct: 123 IIAMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK GEP+WESPWG GRPGWHIECSAMS YLG FD HGGG DL+FPHHENEIAQ
Sbjct: 183 ALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQ 242
Query: 315 SCAACNNSH--ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
S C+ H + YW+HNGF+TI+SEKMSKSL NFF ++ ++E Y P ALR FL+ THYR
Sbjct: 243 S-EGCSGQHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYR 301
Query: 373 SPINYSVVQLESAS---ERIFYIYQTL--------HDCEKALSLLDAAALKDSIPPDTVT 421
SP+++S +LE A+ ER+ + L C++A LL+ A
Sbjct: 302 SPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGSCDEAQRLLEKA------------ 349
Query: 422 SINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIR 481
+ +F +MSDD +T + +++ K IN ++ + E++A +++ +
Sbjct: 350 --KAYEEEFEDAMSDDFNTALATSSMFGLAKEINIYYQAVTSREGVVCQEAIAEVKRIFK 407
Query: 482 NVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRI--EDRTVARKNKEYEKSDAIR 539
+ V+G++ + + A+ E + L ++ R R+ K++ +D IR
Sbjct: 408 FMTDVIGVLEKAW---------EGNTGANAAEYEELMQVILSVRQACREQKQWALADCIR 458
Query: 540 KDLAAVGIALMDSPVGTTWR 559
LA +GI + DSP G W+
Sbjct: 459 DRLAEIGITIEDSPQGARWK 478
>gi|354558420|ref|ZP_08977675.1| cysteinyl-tRNA synthetase [Desulfitobacterium metallireducens DSM
15288]
gi|353546898|gb|EHC16345.1| cysteinyl-tRNA synthetase [Desulfitobacterium metallireducens DSM
15288]
Length = 478
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/485 (45%), Positives = 306/485 (63%), Gaps = 15/485 (3%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NTMS ++E KP+ GKV MY CG T Y+ H+G+ R+ V FD++ RYL + Y+V
Sbjct: 3 LKLFNTMSHQKEEFKPRESGKVAMYTCGPTVYNYVHVGNGRMLVVFDMIRRYLMYKEYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTDVDDKII R E G DP++LSR+Y EE+ +D LH LP +V P+ ++H+P +
Sbjct: 63 TFVQNFTDVDDKIIKRGLEEGVDPLTLSRKYIEEYFKDAKALHVLPATVHPKATEHIPEM 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
+++I ++ G AY VDGDVYF+VDKFP+YG+LSGR LED +AG RV VD RK +P DFA
Sbjct: 123 LEIIQGLITKGLAYEVDGDVYFAVDKFPQYGKLSGRSLEDMQAGARVDVDERKNHPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK AK EP W+SPWG GRPGWHIEC+AMS YLG FDIHGGG DLVFPHHENEIAQS
Sbjct: 183 LWKKAKPDEPSWKSPWGEGRPGWHIECTAMSLKYLGAGFDIHGGGGDLVFPHHENEIAQS 242
Query: 316 CAACNNSHIS-YWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
+ YW+HN F+T + +KMSKSLGNFFT+R++++ + LR +L+ THYRSP
Sbjct: 243 EGYLEGKPFAHYWMHNAFLTFNQQKMSKSLGNFFTVREILDHFSGEVLRFYLLSTHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+++ L A + + + ++ +AL+ +K + + V + H DF A+M
Sbjct: 303 LDFDDENLRMAQKGLERLQTSIRLAAEALTKKGPVEIKLEMNEELVKASETAHRDFEAAM 362
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ + A+L + K IN LL + A L K +L + G++ G+
Sbjct: 363 DDDFNSALAYASLFELGKHINTLLQDYP--------YASAGLAKARETLLELAGVL--GF 412
Query: 495 SEVLLQLREKALKRADLTEDQVLQ-RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L+ E D QV++ + R AR+ K++E SD IR L +GIAL D+P
Sbjct: 413 D---LEHPESQEVAQDEKLTQVMEVLLSVRMKARQKKDWETSDFIRDQLKEIGIALEDTP 469
Query: 554 VGTTW 558
G W
Sbjct: 470 QGARW 474
>gi|294791947|ref|ZP_06757095.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
gi|294457177|gb|EFG25539.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
Length = 482
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/500 (44%), Positives = 313/500 (62%), Gaps = 39/500 (7%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
++ +YNTM+R++E+ P G+ MYVCGVTPY+ HIG+AR +VT+DV+ RY++H+GY+
Sbjct: 3 EITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYK 62
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V YV+NFTDVDDKII +N G +++ RY + + + M L + PRVS H+
Sbjct: 63 VTYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDVLGVQRADIYPRVSTHIDD 122
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
II MI ++D G+AY +DGDVY+SV+KF YG+LSGR L+D AG R+ VD RKKNP DF
Sbjct: 123 IIAMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK GEP+WESPWG GRPGWHIECSAMS YLG FD HGGG DL+FPHHENEIAQ
Sbjct: 183 ALWKAAKHGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQ 242
Query: 315 SCAACNNSH--ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
S C+ H + YW+HNGF+TI+SEKMSKSL NFF ++ ++E Y P ALR FL+ THYR
Sbjct: 243 S-EGCSGQHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYR 301
Query: 373 SPINYSVVQLESAS---ERIFYIYQTL--------HDCEKALSLLDAAALKDSIPPDTVT 421
SP+++S +LE A+ ER+ + L C++A LL+ A
Sbjct: 302 SPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGSCDEAQRLLEKA------------ 349
Query: 422 SINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIR 481
+ +F +MSDD +T + +++ K IN ++ + E++A +++ +
Sbjct: 350 --KAYEEEFEDAMSDDFNTALATSSMFGLAKEINIYYQAVTSREGVVCQEAIAEVKRIFK 407
Query: 482 NVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRI--EDRTVARKNKEYEKSDAIR 539
+ V+G++ + + A+ E + L ++ R R+ K++ +D IR
Sbjct: 408 FMTDVIGVLEKAW---------EGNTGANAAEYEELMQVILSVRQACREQKQWALADCIR 458
Query: 540 KDLAAVGIALMDSPVGTTWR 559
LA +GI + DSP G W+
Sbjct: 459 DRLAEIGITIEDSPQGARWK 478
>gi|381151336|ref|ZP_09863205.1| cysteinyl-tRNA synthetase [Methylomicrobium album BG8]
gi|380883308|gb|EIC29185.1| cysteinyl-tRNA synthetase [Methylomicrobium album BG8]
Length = 477
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/495 (46%), Positives = 308/495 (62%), Gaps = 32/495 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP++EGKVGMYVCG+T YD HIGHARV V FD + RY RHLGY++
Sbjct: 2 LKIYNTLTRRKETFKPRIEGKVGMYVCGMTVYDYCHIGHARVMVVFDTVARYFRHLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GED L+ R+ + H+D L LPP +EPR + + I
Sbjct: 62 TYVRNITDIDDKIIQRANENGEDFNRLTARFIDAMHEDERALAVLPPDIEPRATQSIASI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +L G+AY GDV+++V+KF +YG+LSG+KLE+ +AGERV VD+ K+NP DF
Sbjct: 122 IAMIEALLAKGYAYIGSSGDVFYAVEKFRDYGKLSGKKLEELQAGERVDVDAAKQNPFDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK EP W +PWG GRPGWHIECSAMS LG+ FDIHGGGMDL FPHHENEIAQ
Sbjct: 182 VLWKMAKANEPSWPAPWGDGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A ++ W+HNGFV ++ EKMSKSLGNFFT+R+V++ Y P +R F++ +HYRSP
Sbjct: 242 SEGATGEKFVNLWMHNGFVRVNEEKMSKSLGNFFTVREVLKQYRPEIIRFFILSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS QL ++ + L+ ++ ++ DA L D + F +M
Sbjct: 302 LNYSDEQLNESATAL----NRLYTAQRGVTAPDAPILPD------------YRGRFEQAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVL-----GL 489
+DD +T V ++ L D + +N + K + AA K + +L +L
Sbjct: 346 NDDFNTPVAVSVLFDLARELN-----KAKTKDVEQAGQFAASLKQLGGLLGILQDDPEAW 400
Query: 490 MSTG--YSEVLLQLREKALKRADLTEDQVL--QRIEDRTVARKNKEYEKSDAIRKDLAAV 545
+ +G +S V AD+ V ++I+ R A+K K + +D IR L
Sbjct: 401 LKSGAFHSAVYESATAGDWVSADVMRGDVWIERQIQARLDAKKAKSWALADQIRNQLKEQ 460
Query: 546 GIALMDSPVGTT-WR 559
GI L D+P GTT WR
Sbjct: 461 GIILEDAPNGTTNWR 475
>gi|114048058|ref|YP_738608.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
gi|123030490|sp|Q0HTK4.1|SYC_SHESR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113889500|gb|ABI43551.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
Length = 461
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/488 (46%), Positives = 300/488 (61%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R+++ KP GKVGMYVCGVT YDL HIGH R +V+FD++ RYLR+ GYEV
Sbjct: 4 LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TD+DDKII RANE ED +L+ R E H+D L+ + P EPR + H+ I
Sbjct: 64 NFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHIAEI 123
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ ++L G AY DGDV FSV FPEYG+LSG+ LE +AG RV VD K+NP DF
Sbjct: 124 IDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDF 183
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 243
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +D EKMSKSLGNFFTIR V+ Y P +R FL+ HYRS
Sbjct: 244 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDPETVRYFLLSGHYRSQ 303
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + +Y + D + L++ A A +F F A+M
Sbjct: 304 INYSEENLKQARAALERLYTAIKDVD--LTVAPAPA-------------EEFVAKFKAAM 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ IN L T + AM + ++ + VLG
Sbjct: 349 DDDFNTPEAYSVLFDMVREINRLKTTDMAQASAMAV--------AMKQLADVLG------ 394
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LL A + + ++D+V + I +R AR K++ +D R L +G+ L D
Sbjct: 395 ---LLHQAPDAFFKGEGSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNELGVVLED 451
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 452 GPSGTTWR 459
>gi|153871051|ref|ZP_02000318.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
gi|152072482|gb|EDN69681.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
Length = 463
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/485 (46%), Positives = 306/485 (63%), Gaps = 26/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++N+++++++ P GKV +YVCG+T YD H+GHARV + FDV+ RYLR LGYEV
Sbjct: 2 LTIHNSLTKQKDPFTPIEPGKVRLYVCGMTVYDYCHVGHARVMIVFDVVVRYLRSLGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GED L+ R+ + ++D L+ + P +EPR + +P I
Sbjct: 62 TYVRNITDIDDKIIQRANENGEDINQLTDRFIQAMYEDTDALNVIRPDIEPRATQSIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI +LD +AY D GDV +++ +F YGQLSG+ L+D RAGERV V+ K++P DF
Sbjct: 122 VAMIQSLLDKNYAYLTDNGDVCYAIQRFENYGQLSGKHLDDLRAGERVEVNESKQHPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWG GRPGWHIECSAMS LG+ FDIHGGGMDL FPHHENEIAQ
Sbjct: 182 VLWKTAKPGEPSWESPWGAGRPGWHIECSAMSTHCLGNHFDIHGGGMDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + ++ W+HNGFV I+ EKMSKSL NFFT+R+V+E Y P +R F++ +HYRS
Sbjct: 242 SEGATGETFVNVWMHNGFVRINDEKMSKSLNNFFTVREVLERYQPEVVRYFILTSHYRSE 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS +LE+A + I +Y +++ D + P D+ ++ FL +M
Sbjct: 302 LNYSEQELEAAKQSITRLY---------IAIRDLPNTDEPCPDDS------YNQRFLTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T LAAL K IN L RK +A+ L S + +
Sbjct: 347 NDDFNTPEALAALFSLSKEINIL--RRKKVSEAIPLASELRRLGNLL-------GLLQAK 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ + K L+ ++ Q I +R ARKN+++ +D IR DL A GI L D+
Sbjct: 398 PETFLQGTSQE-KEPGLSVTEIEQLIVERIDARKNRDFATADQIRADLTAKGIILEDNAQ 456
Query: 555 GTTWR 559
GT+WR
Sbjct: 457 GTSWR 461
>gi|348026620|ref|YP_004766425.1| cysteinyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
gi|341822674|emb|CCC73598.1| cysteinyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
Length = 481
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/490 (45%), Positives = 307/490 (62%), Gaps = 17/490 (3%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
+L +YNT++RK+E P G+V MYVCG+TPY+ SH+G+AR +VT+DV+ RYL HLGYE
Sbjct: 3 ELKVYNTLTRKKETFVPVTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLGYE 62
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V +++NFTDVDDKII AN G ++S RY + + M LH PRVS+HM
Sbjct: 63 VTHIQNFTDVDDKIINAANGEGVTWDTISNRYIASYFEVMDKLHIRRADKYPRVSEHMDE 122
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
II M+ ++D G+AY +D DVY+SV+KF +YG+LSGR L+D AG R+ VD RK NP DF
Sbjct: 123 IIHMVQTLIDKGYAYVIDHDVYYSVEKFNDYGELSGRSLDDMMAGARIEVDDRKHNPMDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK AK GEP W+SPWG GRPGWHIECSAMS YLG +FD HGGG DL+FPHHENEIAQ
Sbjct: 183 ALWKGAKPGEPSWDSPWGKGRPGWHIECSAMSNKYLGDTFDFHGGGSDLIFPHHENEIAQ 242
Query: 315 SCAACNNS-HISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
S A + YW+HNGF+TI+SEKMSKSL NFF ++ V+E Y P ALR FLI HYRS
Sbjct: 243 SEAFTGKKPMVKYWLHNGFITINSEKMSKSLNNFFLVKDVLEHYSPDALRFFLISNHYRS 302
Query: 374 PINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
P+++S +LE + + + + + + L++ A K + + +K F +
Sbjct: 303 PLDFSDERLEEMTRSLERLGTAIDNVLELLAM--PAGAKSPEAQQLLETAHKDEEAFENA 360
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T + AA+ D K +N + + +L+ +++ + +LG++
Sbjct: 361 MCDDFNTALASAAMFDLAKNVNIFKNAVVNNGVPVDSAALSEVKRVFKTFTDILGILEDR 420
Query: 494 YSEVLLQLREKALKRADLTE---DQVLQRIED-RTVARKNKEYEKSDAIRKDLAAVGIAL 549
++ K+ D + D ++Q I D R R K+Y +DAIR LAA+GI +
Sbjct: 421 WTG----------KKEDASSKDYDDLMQAILDIRQECRAQKQYALADAIRDKLAALGITI 470
Query: 550 MDSPVGTTWR 559
DSP G W+
Sbjct: 471 EDSPQGARWK 480
>gi|328951998|ref|YP_004369332.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
gi|328452322|gb|AEB08151.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
Length = 490
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/489 (45%), Positives = 298/489 (60%), Gaps = 11/489 (2%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+SR++E P G V +Y CGVT YD HIGHAR V FDV+ RYLR LG +V +
Sbjct: 3 VYNTLSRRKEAFIPLKPGIVQIYACGVTVYDDCHIGHARSAVVFDVIVRYLRFLGNKVSW 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTD+DDKII RA +++ Y F +DM L P +EP+ +DH+ II
Sbjct: 63 VRNFTDIDDKIIQRAEREHTSWKTVAETYIASFQRDMAALGVAPADIEPKATDHIDEIIG 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I + D G AY+ +GDVYF V KFP YG+LSGR L+D AG RV V+ +K NP DFALW
Sbjct: 123 FIQVLEDQGLAYQRNGDVYFPVAKFPGYGKLSGRSLDDMLAGARVDVNIQKDNPFDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K++K GEP W+SPWGPGRPGWHIECSAMS YLG +FDIHGGG DL+FPHHENEIAQS A
Sbjct: 183 KASKPGEPAWDSPWGPGRPGWHIECSAMSRHYLGETFDIHGGGADLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A YW+HNG VT++ EKMSKSLGNFFTIR+V+ +HP +R FLI HYRSP+++
Sbjct: 243 AHGKPLARYWLHNGMVTVNQEKMSKSLGNFFTIREVLAKFHPEVVRFFLIQNHYRSPLDF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEK------ALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
S L A + +Y TL ++ A + A + + + + + FL
Sbjct: 303 SDQALAEAENALERLYSTLARLDQTTGPIAAPEAISGAFSLSGLDSEEQSRLLTIRSRFL 362
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLL-HTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
+M DD +T L L D ++ +N ++ H G + +LA + + + +L L+
Sbjct: 363 EAMDDDFNTAQALGVLFDAVRLLNRIVEHNPSGNAD---MSALAWTRRELTVLGGILNLL 419
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L LR+K + ++ + I R ARK +++ K+DAIR+ LA G+ L
Sbjct: 420 QQDPQTMLQNLRQKT-DALTIPPSEIERLIAARAEARKQRDFTKADAIRQQLAEAGVLLE 478
Query: 551 DSPVGTTWR 559
D+P G WR
Sbjct: 479 DTPQGAVWR 487
>gi|323144957|ref|ZP_08079517.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
gi|322415236|gb|EFY06010.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
Length = 470
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/486 (45%), Positives = 303/486 (62%), Gaps = 34/486 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SRK+E KP EG++GMYVCGVT YDL HIGHAR +V FD++ RYLR+ GY+V
Sbjct: 15 LQIHNTISRKKEEFKPINEGQIGMYVCGVTVYDLCHIGHARTFVNFDMVVRYLRYRGYKV 74
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y+RN TD+DDKII RA+E L+ + E H+D L+ + P EPR ++ +P I
Sbjct: 75 RYIRNITDIDDKIIKRAHERKVSAKELAENFIVEMHKDFDALNIMRPDEEPRATETIPEI 134
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ +++DNG AY D GDV F++D F +YG+LSG+ LE+ AG R+ ++ K+NP DF
Sbjct: 135 IALVQRLIDNGNAYVADNGDVMFAIDTFKQYGRLSGQNLEELEAGARIEIEKTKRNPFDF 194
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ YLG +FDIHGGG DL+FPHHENEIAQ
Sbjct: 195 VLWKMSKPGEPSWSSPWGDGRPGWHIECSAMNLKYLGENFDIHGGGSDLIFPHHENEIAQ 254
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC AC++ +++YW+H+G V I+ EKMSKSL NFFTIR V+E Y +R FL+ YRSP
Sbjct: 255 SCCACHSKYVNYWMHSGMVMINHEKMSKSLNNFFTIRDVLEHYDAETIRFFLLSAQYRSP 314
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + +Y L D + P +++ F M
Sbjct: 315 LNYTQENLDKAKASLARLYTALRD----------------VVPVKAEGEDEYTKRFKELM 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L D K +N K++ E+ A L + + +VLG++
Sbjct: 359 DDDFNTPGAMAVLFDLAKAVN--------KEEG---ETKAKLAGRLVELGSVLGILYQNP 407
Query: 495 SEVLLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
S L K + +D E V++ I++R AR K+++ +DA R L A+GI L D P
Sbjct: 408 SSFL-----KGAESSDNDEVSVIEALIQERKDARARKDFKAADAARDKLTAMGIVLEDGP 462
Query: 554 VGTTWR 559
GTTWR
Sbjct: 463 SGTTWR 468
>gi|113970833|ref|YP_734626.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
gi|123029526|sp|Q0HH98.1|SYC_SHESM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113885517|gb|ABI39569.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
Length = 461
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/488 (46%), Positives = 300/488 (61%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R+++ KP GKVGMYVCGVT YDL HIGH R +V+FD++ RYLR+ GYEV
Sbjct: 4 LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TD+DDKII RANE ED +L+ R E H+D L+ + P EPR + H+ I
Sbjct: 64 NFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHITEI 123
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ ++L G AY DGDV FSV FPEYG+LSG+ LE +AG RV VD K+NP DF
Sbjct: 124 IDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDF 183
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 243
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +D EKMSKSLGNFFTIR V+ Y P +R FL+ HYRS
Sbjct: 244 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDPETVRYFLLSGHYRSQ 303
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + +Y + D + L++ A A +F F A+M
Sbjct: 304 INYSEENLKQARAALERLYTAIKDVD--LTVAPAPA-------------EEFVAKFKAAM 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ IN L T + AM + ++ + VLG
Sbjct: 349 DDDFNTPEAYSVLFDMVREINRLKTTDMAQASAMAV--------AMKQLADVLG------ 394
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LL A + + ++D+V + I +R AR K++ +D R L +G+ L D
Sbjct: 395 ---LLHQAPDAFFKGEGSDDEVAEIEALIVERNRARVEKDWPAADVARNRLNELGVVLED 451
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 452 GPSGTTWR 459
>gi|317486410|ref|ZP_07945237.1| cysteinyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
gi|316922320|gb|EFV43579.1| cysteinyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
Length = 485
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/484 (44%), Positives = 301/484 (62%), Gaps = 3/484 (0%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
+ YNTMSRK+E P +G VG+Y CG+T Y LSHIGHAR V FD+L R LR+ GYEV
Sbjct: 1 MQFYNTMSRKKETFTPVRKGLVGVYACGITAYALSHIGHARSAVAFDILVRLLRYKGYEV 60
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRNFTDVDDKII RAN+ G ++ Y + +H+DM L + +EPR ++H+ +
Sbjct: 61 TFVRNFTDVDDKIIKRANDEGVSSTEIAETYIKAYHEDMDRLGVIRADIEPRATEHIQEM 120
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+++ +++ +G AY GDVYF V FP YG+LSGR +D R+G RV K++P DF
Sbjct: 121 LNLTERLIADGKAYATPSGDVYFRVRSFPGYGKLSGRTPDDLRSGARVVPGDEKEDPLDF 180
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWKSAK GEP+WESPWG GRPGWHIECSAMS Y+ DIHGGG+DL+FPHHENEIAQ
Sbjct: 181 ALWKSAKPGEPYWESPWGKGRPGWHIECSAMSEKYIPLPLDIHGGGLDLIFPHHENEIAQ 240
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
+ AA + W+HNGFV +DSEKMSKSLGNF TIR ++E Y LR FL G HYRSP
Sbjct: 241 TEAALGKPLANIWMHNGFVQVDSEKMSKSLGNFKTIRDILESYLAETLRYFLAGKHYRSP 300
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
I++S+ ++ + +Y+ L + +KAL+ + + P + V + + F+ ++
Sbjct: 301 IDFSLDNMDESERSQKRVYECLREVDKALARENWKP--GAAPAELVEELKQQDQSFMDAL 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD++T + L + ++ +L +K + + L A T+LGL +
Sbjct: 359 EDDVNTAAAMGHLFNMVRIAGRVLEDKKLRNSEGGRDILRAFRDATAKWDTLLGLFAQKP 418
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L LRE +R L ++V + +R AR K++ +SDA R +LAA+G+ + D+P
Sbjct: 419 EGFLASLREIRARRRGLDMNKVAGLLRERQEARAAKDFARSDAARDELAALGVEVRDTPE 478
Query: 555 GTTW 558
G W
Sbjct: 479 GPVW 482
>gi|448747541|ref|ZP_21729198.1| Cysteinyl-tRNA synthetase, class Ia [Halomonas titanicae BH1]
gi|445564821|gb|ELY20936.1| Cysteinyl-tRNA synthetase, class Ia [Halomonas titanicae BH1]
Length = 468
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/486 (45%), Positives = 303/486 (62%), Gaps = 26/486 (5%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
+ + +YNT++R++E P GKV MYVCG+T YD H+GHARV V FDV+ RYLR GY
Sbjct: 3 SHMHIYNTLTRRKEPFTPLEAGKVSMYVCGMTVYDYCHLGHARVMVAFDVITRYLRERGY 62
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
+V YVRN TD+DDKI+ RA+E GE +L+ R + H+D L LPPS EPR + H+
Sbjct: 63 DVNYVRNITDIDDKILKRADENGESITALTERMIDAMHEDEARLFVLPPSHEPRATGHID 122
Query: 194 HIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
I+ MI +++ GFAY D GDVY+ V KF +YG+L+ R+L+D RAG RV VD K++P
Sbjct: 123 DIVAMIETLIEKGFAYAADNGDVYYRVRKFADYGKLNNRQLDDMRAGSRVDVDVHKEDPL 182
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DF LWK+AK GE W SPWG GRPGWHIECSAMS LG +FDIHGGG DL FPHHENEI
Sbjct: 183 DFVLWKAAKPGEAHWASPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEI 242
Query: 313 AQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
AQS AA ++++ W+H G V ++ EKMSKSLGNFFTIR V+ + P +R L+ +HYR
Sbjct: 243 AQSEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRFLLVASHYR 302
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
SPINYSV L A + + +Y L E L AA D+ + + F
Sbjct: 303 SPINYSVDSLTEARKSLTRLYTALEGLE-----LGAANSDDA---------SAYRERFTQ 348
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
M DD +T LA + + + +N R ++Q LA ++ + +VLGL+
Sbjct: 349 VMDDDFNTPEALAVMFELAREVN-----RAKQEQPNEAAKLAG---ELKQLGSVLGLLQQ 400
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
L +++ + L+E ++ +I R A+ NK++ ++DAIR +LAA+GI L DS
Sbjct: 401 EPQTFLKGTQQQGMP---LSESEIEAKIAQRIEAKANKDFAQADAIRDELAALGIILKDS 457
Query: 553 PVGTTW 558
GT+W
Sbjct: 458 REGTSW 463
>gi|119945844|ref|YP_943524.1| cysteinyl-tRNA synthetase [Psychromonas ingrahamii 37]
gi|119864448|gb|ABM03925.1| cysteinyl-tRNA synthetase [Psychromonas ingrahamii 37]
Length = 461
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/486 (47%), Positives = 300/486 (61%), Gaps = 30/486 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP + GKVGMYVCG+T YD HIGH R +V FD + RYLR GY +
Sbjct: 2 LKIYNSLTRQKEPFKPLIPGKVGMYVCGITIYDYCHIGHGRTFVAFDTVARYLRFSGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y+RN TDVDDKII RA E E L+ R+ E HQD L L P +EPRV+DHMP +
Sbjct: 62 NYIRNITDVDDKIIKRAAENNESCDQLTSRFTEAMHQDFDALFMLRPDLEPRVTDHMPEV 121
Query: 196 IDMITQILDNGFAYRVDG-DVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+MI +++ G AY + DV F+VD F EYGQLSG+ LE RAG RV V+ K+NP DF
Sbjct: 122 IEMIKKLIAKGHAYVAENNDVLFAVDSFKEYGQLSGQNLEMLRAGSRVEVEESKRNPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK EPFW SPWG GRPGWHIECSAM+ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMAKPAEPFWTSPWGNGRPGWHIECSAMNHKHLGEVFDIHGGGSDLAFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D KMSKSL NFFTI++V++ + ++R FLI HYRS
Sbjct: 242 SCCAHHGQYVNTWMHSGMVQVDKVKMSKSLKNFFTIKEVLKFFDSESVRYFLISGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y ++ D P D N + F+ +M
Sbjct: 302 LNYSEDNLKQARASLERLYNSVRDL----------TFSKDTPLDKT---NLHYQQFIKAM 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAA-LEKTIRNVLTVLGLMSTG 493
DD +T LA L D K IN L K+ ++ SL+A L T+ N VLGL++
Sbjct: 349 DDDFNTPGALAVLFDLAKEINRL------KQSNIKQASLSAGLLVTLAN---VLGLLNQS 399
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+E LQ EK + A + I+ R AR+NK++ +D+ R LAA+ I L D P
Sbjct: 400 -AEQFLQGDEKNEEVA-----MIEALIKQRNDARQNKDWASADSARDKLAALKIVLEDGP 453
Query: 554 VGTTWR 559
GTTWR
Sbjct: 454 GGTTWR 459
>gi|341581496|ref|YP_004761988.1| cysteinyl-tRNA synthetase [Thermococcus sp. 4557]
gi|340809154|gb|AEK72311.1| cysteinyl-tRNA synthetase [Thermococcus sp. 4557]
Length = 476
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/482 (45%), Positives = 293/482 (60%), Gaps = 14/482 (2%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+++++E +P +G+V MYVCG T YD +H+GHAR YV FDV+ RYL H GY V
Sbjct: 5 VYNTLTKQKEEFRPLRDGEVRMYVCGPTVYDYTHLGHARTYVAFDVIRRYLEHRGYSVLM 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTD+DDKII RANE GEDP L+ R+ F +DM L P V PRV++HM II+
Sbjct: 65 VMNFTDIDDKIIRRANETGEDPKELAERFLRLFLEDMEALKVKPADVYPRVTEHMDDIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ ++ + G+AY VYF V +F +YG+LSG KLE+ R G RV KKNP DFALW
Sbjct: 125 FVRKLQEKGYAYEGSDGVYFEVQRFKDYGKLSGIKLEELRKGARVEPGEGKKNPEDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K AK GEP WESPWG GRPGWHIECS MS YLG SFDIHGGG DL+FPHHENEIAQ+ A
Sbjct: 185 KKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQTEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ + YW+H GF+ ++ EKMSKSLGNF TIR+++E Y+P +RLF++ HYRSP++Y
Sbjct: 245 CTGHEWVHYWLHTGFLMVNGEKMSKSLGNFVTIREMLERYNPEVIRLFILQRHYRSPLDY 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
+ +E A + +Y TL + A+ D A + +I F +M DD
Sbjct: 305 TEEGMEHAKNNLERLYNTLENIRVAMERADIAFKWGPEEFEAYEAIRNAREKFHEAMDDD 364
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T L A+ + +N L + K+++ ++L + R V V G+ + E
Sbjct: 365 FNTAEALKAVFEASNAVNRYLTVVEKPKESILRKAL----EFFRMVSEVFGIFEDYFRE- 419
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
+RA E + I+ R RK K + +D IR +L +GI L D+P GT
Sbjct: 420 ---------QRAGEEEALIQLLIDVRAQLRKEKNFALADKIRAELREMGIQLEDTPQGTV 470
Query: 558 WR 559
W+
Sbjct: 471 WK 472
>gi|338533810|ref|YP_004667144.1| cysteinyl-tRNA synthetase [Myxococcus fulvus HW-1]
gi|337259906|gb|AEI66066.1| cysteinyl-tRNA synthetase [Myxococcus fulvus HW-1]
Length = 489
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/484 (47%), Positives = 308/484 (63%), Gaps = 6/484 (1%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
L+NTM+ ++EL++P + G+VG+YVCG T Y HIG+AR + +FDV+ RYLRH G +V Y
Sbjct: 8 LFNTMTMQKELLQPAIPGEVGVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRHRGLKVRY 67
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTDVDDKII A E GE P++L+ RY E F +D LH L P P+VSDH+P II
Sbjct: 68 VRNFTDVDDKIIKAAAETGEAPVALAARYVEIFREDTRALHLLEPDFAPKVSDHLPEIIA 127
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++D G AY GDVYFSV +Y +LS R L+D GERV +K+ P DFALW
Sbjct: 128 IIQKLVDKGHAYASQGDVYFSVSSDADYAKLSRRNLDDLCVGERVQPGEQKREPLDFALW 187
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK GEP W+SPWGPGRPGWHIECSAMSA YLG +FDIHGG +DL+FPHHENEIAQS +
Sbjct: 188 KAAKPGEPAWDSPWGPGRPGWHIECSAMSAKYLGETFDIHGGALDLIFPHHENEIAQSES 247
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A S YW+H GF+ ++ KMSKSLGN +R + P ALR F + THYR P+++
Sbjct: 248 ANGVSFARYWMHCGFLDLEGAKMSKSLGNVVRLRDALTKVDPEALRFFFLATHYRHPLSF 307
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L A R+ Y Y+TL ++ +S D K + D +F +F ++M DD
Sbjct: 308 SDKALADAETRMEYFYETLRKVDERISGKDFG--KGPLHGDP----RRFFTEFESAMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T L ALS +N+L K +A+ +L AL + +R V VLGL
Sbjct: 362 FNTAGGLGALSGLFGMMNELTDKPPVKDKALVGRTLQALREDVRRVSGVLGLFEDAPDAW 421
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
LL+ RE+A++ + V + + +RT AR K++ +D +R +L G+ +MD+P GTT
Sbjct: 422 LLRRRERAVRERGIDVAAVERLLGERTAARAAKDFAAADRVRSELKQQGVEIMDTPAGTT 481
Query: 558 WRPA 561
W+ A
Sbjct: 482 WKVA 485
>gi|117921105|ref|YP_870297.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
gi|166225306|sp|A0KYM2.1|SYC_SHESA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|117613437|gb|ABK48891.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
Length = 461
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 296/488 (60%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R+++ KP GKVGMYVCGVT YDL HIGH R +V+FD++ RYLR+ GYEV
Sbjct: 4 LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TD+DDKII RANE ED +L+ R E H+D L+ + P EPR + H+ I
Sbjct: 64 NFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHIAEI 123
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ ++L G AY DGDV FSV FPEYG+LSG+ LE +AG RV VD K+NP DF
Sbjct: 124 IDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDF 183
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 243
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 244 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 303
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + +Y + D + + T +F F A+M
Sbjct: 304 INYSEENLKQARAALERLYTAIKDVDLTV---------------TAAPAEEFVAKFKAAM 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ IN L T + AM + ++ + VLG
Sbjct: 349 DDDFNTPEAYSVLFDMVREINRLKTTDMAQASAMAV--------AMKQLADVLG------ 394
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LL A + + ++D+V + I +R AR K++ +D R L +G+ L D
Sbjct: 395 ---LLHQAPDAFFKGEGSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNELGVVLED 451
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 452 GPSGTTWR 459
>gi|431792448|ref|YP_007219353.1| cysteinyl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782674|gb|AGA67957.1| cysteinyl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 477
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/484 (44%), Positives = 308/484 (63%), Gaps = 13/484 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NTMS ++E KP+ +GKV MY CG T Y+ H+G+ R+ V FD++ RYL + GY+V
Sbjct: 3 LRLFNTMSHQKEEFKPREKGKVAMYTCGPTVYNYFHVGNGRMLVVFDMIRRYLMYKGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTD+DDKII R NE G DP+ L+++Y EE+ +D L+ + ++ P+ +DH+P +
Sbjct: 63 TFVQNFTDIDDKIINRGNEEGIDPLELAQKYIEEYFKDAKALNLMTATIHPKATDHIPEM 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I++I + ++G AY V+GDVYF+VDK P+YG+LSGR ED +AG RV V+ RK NP DFA
Sbjct: 123 IEIIKGLEESGLAYAVEGDVYFAVDKLPDYGKLSGRNFEDMQAGARVEVEERKHNPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWKSAK GEPFWESPWG GRPGWHIEC+AMS YLG FDIHGGG DLVFPHHENEIAQS
Sbjct: 183 LWKSAKPGEPFWESPWGKGRPGWHIECTAMSLKYLGAGFDIHGGGGDLVFPHHENEIAQS 242
Query: 316 CAACNNSHIS-YWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
+ + YW+HN F+TI+ +KMSKSLGNFFT+R+++E + +R +L+GTHYRSP
Sbjct: 243 EGYLHGETFARYWMHNAFLTINQQKMSKSLGNFFTVREILEHFSGEVIRFYLLGTHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+++ L+ A + + + ++ ++AL ++ + + + +F ++M
Sbjct: 303 LDFDDENLQMAQKGLERLQTSIRLADEALGRHGEKPADEANDQKLIAAAEEAQREFESAM 362
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ + A+L + K IN H + + L+ A T+ + VLG
Sbjct: 363 DDDFNSALAYASLFELGKVIN--AHVQAYPYGSAGLQKARA---TLWELADVLGFDLAHP 417
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ EK + DL +E R +ARK K++E SD IR L +GI L D+P
Sbjct: 418 ANSAEAGNEKLDQVMDLL-------LEVRAIARKKKDWEMSDLIRDRLKDLGIVLEDTPQ 470
Query: 555 GTTW 558
G W
Sbjct: 471 GARW 474
>gi|119774358|ref|YP_927098.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
gi|187631632|sp|A1S4X2.1|SYC_SHEAM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|119766858|gb|ABL99428.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
Length = 459
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/485 (47%), Positives = 299/485 (61%), Gaps = 30/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN++SR++E KP GK+GMYVCGVT YDL HIGH R +V FD++ RYLR+ GYEV
Sbjct: 2 LKIYNSISRQKEEFKPIQPGKIGMYVCGVTIYDLCHIGHGRTFVCFDMIVRYLRYRGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y RN TDVDDKII RANE GE SL+ R E H D L+ + PS EPR + H+ I
Sbjct: 62 NYQRNITDVDDKIIKRANENGESCDSLTERLIGEMHADFDALNMVRPSFEPRATLHIDEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+T++LD G AY DGDV F V + YG+LSG+ LE +AG RV VD K+NP DF
Sbjct: 122 IDMVTRLLDRGHAYVAADGDVLFDVSSYAAYGRLSGQDLEQLQAGARVEVDENKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W+SPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNTWMHTGMVMVDREKMSKSLGNFFTIRDVLAHYDAQTVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L K L L AA D +F + F+A+M
Sbjct: 302 LNYSEDNLKQARASLERMYTAL----KGLDLTVEAAGAD-----------EFVSRFMAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ IN L + + + + L ++ + VLG++S+
Sbjct: 347 DDDFNTPEAYSVLFDMVREINRL--------KTSDMAAASQLGVALKELAEVLGILSS-T 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ A + A++ I +R AR K++ +D R L A+G+ L D P
Sbjct: 398 PEAFLQGEGNADEVAEIE-----ALIVERNRARAEKDWPAADVARDRLNALGVVLEDGPE 452
Query: 555 GTTWR 559
GTTWR
Sbjct: 453 GTTWR 457
>gi|108764055|ref|YP_630849.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
gi|108467935|gb|ABF93120.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
Length = 504
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/484 (46%), Positives = 309/484 (63%), Gaps = 6/484 (1%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
L+NTM+ ++EL++P + G+VG+YVCG T Y HIG+AR + +FDV+ RYLRH G +V Y
Sbjct: 23 LFNTMTMQKELLQPAIPGEVGVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRHRGLKVRY 82
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTDVDDKII A E GE P+ L+ RY E F +D LH L P PRVSDH+P II
Sbjct: 83 VRNFTDVDDKIIKAAAETGEAPVELAARYVEIFREDTRALHLLEPDFSPRVSDHLPEIIA 142
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++D G AY GDVYFSV +Y +LS R L++ GERV +K+ P DFALW
Sbjct: 143 IIQKLVDKGHAYASQGDVYFSVSSDEDYAKLSKRNLDELCVGERVQPGEQKREPLDFALW 202
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK GEP WESPWGPGRPGWHIECSAMSA YLG +FDIHGG +DL+FPHHENEIAQS +
Sbjct: 203 KAAKPGEPAWESPWGPGRPGWHIECSAMSAKYLGETFDIHGGALDLIFPHHENEIAQSES 262
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A + YW+H GF+ ++ KMSKSLGN +R + P ALR F + THYR P+++
Sbjct: 263 ANGVTFARYWMHCGFLDLEGAKMSKSLGNVVRLRDALTKVDPEALRFFFLATHYRHPLSF 322
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L A R+ Y Y+TL ++ +S D K + D +F +F ++M DD
Sbjct: 323 SDKALADAETRMEYFYETLRKVDERISGKDFG--KGPLHGDP----QRFFTEFESAMDDD 376
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T L +LS +N+L K +A+ +L AL + +R V +VLGL
Sbjct: 377 FNTAGGLGSLSGLFGMMNELTDKPPVKDKALVGRTLHALREDVRRVSSVLGLFEDAPDAW 436
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
LL+ RE+A++ + +V + + +RT AR K++ +D +R +L G+ +MD+P GTT
Sbjct: 437 LLRRRERAVRERGIDVAEVERLLGERTAARAAKDFAAADRVRSELKEKGVEIMDTPAGTT 496
Query: 558 WRPA 561
W+ A
Sbjct: 497 WKVA 500
>gi|313672372|ref|YP_004050483.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
gi|312939128|gb|ADR18320.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
Length = 479
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/488 (45%), Positives = 310/488 (63%), Gaps = 21/488 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+S ++E+ P + KV +YVCGVT YD HIGHAR + FD + RYL++ G++V
Sbjct: 2 LKIFNTLSGEKEVFTPLEDNKVKIYVCGVTVYDYCHIGHARSSIVFDTIRRYLKYKGFDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTDVDDKII RANE + ++ + + +DM L+ L P PR ++++ +
Sbjct: 62 TFVKNFTDVDDKIIKRANEENKSINEITDFFIKAHDEDMDKLNILRPDYTPRATEYIDGM 121
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I + ++++ GFAY +GDVYF V F +YG+LS R L+D AG RV V+ K++P DFA
Sbjct: 122 IKLCEKLIEKGFAYESNGDVYFKVRAFKDYGKLSKRDLDDLLAGARVDVNEIKEDPLDFA 181
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK +KEGEP W+SPWG GRPGWHIECS MSA LG FDIHGGG DL+FPHHENEIAQS
Sbjct: 182 LWKRSKEGEPGWDSPWGRGRPGWHIECSVMSAEILGIPFDIHGGGKDLIFPHHENEIAQS 241
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA YWIHNGFV I+ EKMSKSLGNFFTIR V++ P LR FL+ THYRSP+
Sbjct: 242 EAAEGKEFARYWIHNGFVNINKEKMSKSLGNFFTIRDVLKEVDPEVLRFFLLTTHYRSPL 301
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
++S L A + IY + + E A+ A K I D + +++F DF SM
Sbjct: 302 DFSFENLLEAENALDRIYTAIDELESAVFNNKKPAQKGKI--DEI--VDRFKRDFEESMD 357
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQ----AMRLESLAALEKTIRNVLTVLGLMS 491
DD +T ++ + + +K +N LL R + +R E + A+ IR+VL +L +
Sbjct: 358 DDFNTASAISNIFELIKGVNLLLSERLNSEDLNYLKVRFEEVKAI---IRDVLGILTKTA 414
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ + ++ L + E L++ IE+R +AR+NK++ K+DAIR +L G+ L+D
Sbjct: 415 SEWFKMNLSIDESELQKL----------IEEREIARRNKDFSKADAIRNELKTKGVELLD 464
Query: 552 SPVGTTWR 559
+P GT +R
Sbjct: 465 TPTGTKFR 472
>gi|255318181|ref|ZP_05359420.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262379610|ref|ZP_06072766.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
gi|255304727|gb|EET83905.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262299067|gb|EEY86980.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
Length = 473
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 304/489 (62%), Gaps = 27/489 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ G + MYVCG+T YD HIGHARV V FD + R+LR G+EV Y
Sbjct: 6 LYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWEVKY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE +L+ R+ + ++D L CL P PR ++++ + +
Sbjct: 66 VRNITDIDDKIIKRANENGETIQALTDRFIQAMNEDAHRLGCLAPDEAPRATEYIDQMQN 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++DNG AY +GDVYF V++F +YG+LSGRKL+D +AG +RV V+ KK+P DF
Sbjct: 126 MIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVEVDKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EPFW SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDFLAS 433
+N+S V L+ A + Y A + + ++ H F A+
Sbjct: 306 VNFSDVALKEAKTALTRFYHAF------------KAYQQQFNEELTDHFSQIHLERFNAA 353
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T +A L + K +N L E T+R++ +LGL+
Sbjct: 354 MCDDFNTAEAMAVLFELAKELNRALKEENA-------EQAKVFYSTLRHLTNILGLVQHN 406
Query: 494 YSEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L + ++AL L+E ++ + I+ R A+K K++ K+D+IR++L G+ L D+
Sbjct: 407 VDDFLRSDIGQEALG---LSESEIEELIQQRVDAKKAKDFTKADSIRQNLLNQGVVLEDT 463
Query: 553 PVGTTWRPA 561
GT WR A
Sbjct: 464 RQGTLWRRA 472
>gi|392423874|ref|YP_006464868.1| cysteinyl-tRNA synthetase [Desulfosporosinus acidiphilus SJ4]
gi|391353837|gb|AFM39536.1| cysteinyl-tRNA synthetase [Desulfosporosinus acidiphilus SJ4]
Length = 477
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/485 (44%), Positives = 308/485 (63%), Gaps = 14/485 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NTM+R++E K + GKV MYVCG T Y+ H G+AR++V FD++ RY + GY+V
Sbjct: 3 LRLFNTMTRQKEEFKSRESGKVAMYVCGPTTYNFFHAGNARMFVVFDMIRRYFMYKGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YV+NFTDVDDKII R + G DP++L+++Y +E+ +D L+ LP +V P+ ++H+P +
Sbjct: 63 RYVQNFTDVDDKIIQRGHVEGMDPLALAQKYIDEYFKDAKALNILPATVHPKATEHIPEM 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I++I +++ G AY VDGDVYF+VD FP YG+LSGR LED +AG R+ VD RK +P DFA
Sbjct: 123 IEIIQGLIETGLAYDVDGDVYFAVDHFPNYGKLSGRTLEDMKAGARIEVDERKHHPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK AK GEP WESPWG GRPGWHIEC+AMS YLG FDIHGGG DLVFPHHENEIAQ+
Sbjct: 183 LWKKAKPGEPSWESPWGLGRPGWHIECTAMSLKYLGAGFDIHGGGGDLVFPHHENEIAQT 242
Query: 316 CAACNNSHIS-YWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
N + YW+HN F+TI+ EKMSKSLGNFFT R+++ +R +L+GTHYRSP
Sbjct: 243 EGYLNGQTFAHYWMHNAFLTINQEKMSKSLGNFFTTRELLAKNSGEVIRFYLLGTHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++++ L A + + + ++ ++AL + + I + + F +M
Sbjct: 303 LDFNDENLGMAQKGLERLQTSVRLAQQALERT-GSVRNERIEEGLKKAAQEAREAFEKAM 361
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ + AAL + KT+N + QA LA +KT+ + VLG
Sbjct: 362 DDDFNSALAYAALFELAKTMNGYVQEHPVSSQA-----LATAQKTLIELGEVLGFDLLHP 416
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
++V ++ E K +L ++ R+ AR+ K++E SD IR A GI + D+P
Sbjct: 417 AQVQVENEEMLSKVMELV-------LKIRSKARQKKDWEMSDFIRDAFKAEGIVIEDTPQ 469
Query: 555 GTTWR 559
G +W+
Sbjct: 470 GASWK 474
>gi|421465010|ref|ZP_15913698.1| cysteine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
gi|400204272|gb|EJO35256.1| cysteine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
Length = 473
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 304/489 (62%), Gaps = 27/489 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ G + MYVCG+T YD HIGHARV V FD + R+LR G+EV Y
Sbjct: 6 LYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWEVKY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE +L+ R+ + ++D L CL P PR ++++ + +
Sbjct: 66 VRNITDIDDKIIKRANENGETIQALTDRFIQAMNEDAHRLGCLEPDEAPRATEYIDQMQN 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++DNG AY +GDVYF V++F +YG+LSGRKL+D +AG +RV V+ KK+P DF
Sbjct: 126 MIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVEVDKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EPFW SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDFLAS 433
+N+S V L+ A + Y A + + ++ H F A+
Sbjct: 306 VNFSDVALKEAKTALTRFYHAF------------KAYQQQFNEELTDHFSQIHLERFNAA 353
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T +A L + K +N L E T+R++ +LGL+
Sbjct: 354 MCDDFNTAEAMAVLFELAKELNRALKEENA-------EQAKVFYSTLRHLTNILGLVQHN 406
Query: 494 YSEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L + ++AL L+E ++ + I+ R A+K K++ K+D+IR++L G+ L D+
Sbjct: 407 VDDFLRSDIGQEALG---LSESEIEELIQQRVDAKKAKDFTKADSIRQNLLNQGVVLEDT 463
Query: 553 PVGTTWRPA 561
GT WR A
Sbjct: 464 RQGTLWRRA 472
>gi|53805250|ref|YP_113028.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
gi|61216155|sp|Q60BG8.1|SYC_METCA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53759011|gb|AAU93302.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
Length = 465
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/490 (46%), Positives = 301/490 (61%), Gaps = 34/490 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E +P +V MYVCG+T YD H+GHARV V FD++ RYLRHLG +V
Sbjct: 2 LKIYNSLTRQKEEFRPLEPRRVRMYVCGMTVYDYCHLGHARVMVVFDMVARYLRHLGLKV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R+ E H+D L LPP EPR ++ + I
Sbjct: 62 TYVRNVTDIDDKIIRRAVENGETIGALTARFIEAMHEDERALGVLPPDHEPRATESIDDI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI +++ G AY +GDV+++V FP YG+LSG+ L++ RAGER+ VD K++P DF
Sbjct: 122 LAMIGTLIERGHAYVGSNGDVFYAVASFPNYGRLSGKNLDELRAGERIEVDEAKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWKSAK GEPFW SPWGPGRPGWHIECSAMS LG FDIHGGGMDL FPHHENEIAQ
Sbjct: 182 VLWKSAKPGEPFWASPWGPGRPGWHIECSAMSTRCLGAHFDIHGGGMDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A ++YW+HNGFV I+ EKMSKSLGNFFT+R+++ Y P +R F++ +HYRSP
Sbjct: 242 SEGATGEHFVNYWMHNGFVRINEEKMSKSLGNFFTVREILARYRPEVVRFFILNSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A+ + +Y L L L P F + F +M
Sbjct: 302 LNYSDENLDEAAAALSRLYTALRGLAPDLPL-----------PLGEDRDEGFSSRFADAM 350
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L D + IN R + + +L A K++ NVL
Sbjct: 351 QDDFNTPEAIAVLFDLAREIN-----RHKAAEPAKAAALGATLKSLGNVLG--------- 396
Query: 495 SEVLLQLREKALKRAD-----LTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LLQ +A ++D L++ + RI R ARK K + +SD IR +L A GI L
Sbjct: 397 ---LLQTDPEAYFKSDAGGSGLSDADIETRIRARLEARKAKNWAESDRIRDELKAQGIIL 453
Query: 550 MDSPVGTTWR 559
DS GTTWR
Sbjct: 454 EDSAAGTTWR 463
>gi|421857183|ref|ZP_16289537.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403187405|dbj|GAB75738.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 473
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 304/489 (62%), Gaps = 27/489 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ G + MYVCG+T YD HIGHARV V FD + R+LR G+EV Y
Sbjct: 6 LYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWEVKY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE +L+ R+ + ++D L CL P PR ++++ + +
Sbjct: 66 VRNITDIDDKIIKRANENGETIQALTDRFIQAMNEDAHRLGCLEPDEAPRATEYIDQMQN 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++DNG AY +GDVYF V++F +YG+LSGRKL+D +AG +RV V+ KK+P DF
Sbjct: 126 MIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVEVDKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EPFW SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDFLAS 433
+N+S V L+ A + Y A + + ++ H F A+
Sbjct: 306 VNFSDVALKEAKTALTRFYHAF------------KAYQQQFNEELTDHFSQIHLERFNAA 353
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T +A L + K +N L E T+R++ +LGL+
Sbjct: 354 MCDDFNTAEAMAVLFELAKELNRALKEENA-------EQAKVFYSTLRHLTNILGLVQHN 406
Query: 494 YSEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L + ++AL L+E ++ + I+ R A+K K++ K+D+IR++L G+ L D+
Sbjct: 407 VDDFLRSDIGQEALG---LSESEIEELIQQRVDAKKAKDFTKADSIRQNLLDQGVVLEDT 463
Query: 553 PVGTTWRPA 561
GT WR A
Sbjct: 464 RQGTLWRRA 472
>gi|258513619|ref|YP_003189841.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257777324|gb|ACV61218.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 500
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/504 (44%), Positives = 313/504 (62%), Gaps = 27/504 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
+ LYNT+SR++E P + G+V MYVCG T Y+ H+G+AR V FD + RYL + GY+V
Sbjct: 1 MLLYNTLSRQKEEFVPAIPGRVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYLIYKGYQV 60
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YV+NFTD+DDKII RA E DP +L+ +Y EE++ D L+ + + P+VSDHM I
Sbjct: 61 LYVQNFTDIDDKIIKRAAEEKLDPSALAFKYTEEYYIDATSLNVMMADIHPKVSDHMAEI 120
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I+++ +++ GFAY+ DGDVYF V +F +YG+LSGR LED AG RV V+ +K++P DFA
Sbjct: 121 IELVEKLVQKGFAYQSDGDVYFEVRRFKDYGKLSGRALEDMLAGARVEVNEKKRDPMDFA 180
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+AK GEP W SPWG GRPGWHIECSAMS YLG +FD+HGGG DL+FPHHENEIAQS
Sbjct: 181 LWKAAKPGEPSWNSPWGQGRPGWHIECSAMSLKYLGENFDMHGGGADLIFPHHENEIAQS 240
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA YW+HNGF+T++ EKMSKSLGNFF +R++++ + P +R FL+GTHYRSP+
Sbjct: 241 EAATGEPLARYWLHNGFITVNQEKMSKSLGNFFLVREILDKFSPEVVRFFLLGTHYRSPL 300
Query: 376 NY---SVVQLESASERIFYIYQTLHD-CEKALSLLDAAALKDSIPPDTVTSI-------- 423
++ + +E +RI Q L + C++A +D + + P VTSI
Sbjct: 301 DFDDEKLAVVEKGLDRIRTSIQLLGEACQRA--GVDFSMINAKEKPARVTSIIDTRHSSM 358
Query: 424 ---NKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHT---RKGKKQAMRLESLAALE 477
K F +M DD +T + + +L + K N L+ + + +++ L A L
Sbjct: 359 KAFIKIKTSFEQAMEDDFNTALAVGSLFELAKETNILVQSLGPKISEQEKACLLQAAELF 418
Query: 478 KTIRNVLTVLGL-MSTGYSEVLLQLREKALKRADLTEDQVLQRIED-RTVARKNKEYEKS 535
K VL + + TGY L + D + V+Q + D R ARKNK + S
Sbjct: 419 KLFNQVLGIFKEDLCTGYP-----LVTPVDESGDGMLEAVMQMLLDIRNEARKNKNWALS 473
Query: 536 DAIRKDLAAVGIALMDSPVGTTWR 559
D IR L + + L D+P GT W+
Sbjct: 474 DRIRDALKDINVILEDTPQGTRWK 497
>gi|167629446|ref|YP_001679945.1| cysteinyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
gi|229558718|sp|B0TC35.1|SYC_HELMI RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167592186|gb|ABZ83934.1| cysteinyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
Length = 481
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/495 (45%), Positives = 312/495 (63%), Gaps = 25/495 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+SR++E P G+VGMYVCG T YD H+G+AR V FD + RYL H+GYEV
Sbjct: 3 LRVYNTLSREKETFVPHKAGRVGMYVCGPTTYDYIHLGNARPLVVFDTIRRYLEHVGYEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y++NFTD+DDKII RA E+GEDPI+++ R+ EE+++D L+ P ++ P+VS HM I
Sbjct: 63 VYIQNFTDIDDKIIHRAKEIGEDPIAMAARFVEEYYRDAKALNVRPATIHPKVSAHMAEI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I MI +++ G AY + GDVYFS+ F +YG+LSGR LED +AG RV V+ RK++P DFA
Sbjct: 123 IAMIGVLVEKGHAYELGGDVYFSIPSFKDYGKLSGRSLEDLQAGARVDVNERKRHPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK AK GEP W+SPWG GRPGWHIECSAMS YLG +FDIHGGG DL+FPHHENEIAQS
Sbjct: 183 LWKGAKPGEPSWDSPWGKGRPGWHIECSAMSRKYLGDAFDIHGGGQDLIFPHHENEIAQS 242
Query: 316 CAACNNSHIS-YWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
A S ++ YW+HNGF+T++ EKMSKSLGNFFT+R++++ + +R +L+ THYRSP
Sbjct: 243 EACTGTSPMARYWLHNGFITVNQEKMSKSLGNFFTLREILKRFPGDVIRFYLLSTHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLA-- 432
I++ +LE+A + + + + E+AL+ A+ + + P K +LA
Sbjct: 303 IDFDDSKLEAAQKGLQRLRTSRRLIEEALA---ASGKEGAERP--AGQREKLEEQWLAAK 357
Query: 433 -----SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVL 487
+M DD +T + L+ L D + N LH R + L + +T + VL
Sbjct: 358 KGFREAMDDDFNTALALSMLFDLAREANTFLHGGFALTPEDR-QLLLQVAETFEELAGVL 416
Query: 488 GLMSTGYSEVLLQLREKALKRADLTEDQVLQ-RIEDRTVARKNKEYEKSDAIRKDLAAVG 546
G + L A D T D ++ I R ARK K++ +D IR L +G
Sbjct: 417 G----------IDLAGGAAAADDNTVDGLMNLLIGIRAEARKKKDWATADRIRDGLKELG 466
Query: 547 IALMDSPVGTTWRPA 561
I + D+P G W+ A
Sbjct: 467 IVIEDTPQGARWKKA 481
>gi|224825711|ref|ZP_03698815.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
gi|224601935|gb|EEG08114.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
Length = 457
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/485 (46%), Positives = 299/485 (61%), Gaps = 32/485 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++R++E+ KP GK MYVCG+T YD H+GHAR+ V FD++ R+LR GY++ Y
Sbjct: 4 LYNTLTRQKEVFKPITPGKASMYVCGMTVYDYCHLGHARMVVVFDMVARWLRATGYDLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RA E GE +L+ R+ + ++D L + P EPR ++H+P +I
Sbjct: 64 VRNITDIDDKIIKRAAENGEPIQALTARFIDAMNEDFDALGVIHPDFEPRATEHVPGMIA 123
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+I ++ NG AY +GDVY++V +FP YG+LSG+ LED RAGERV VD K++P DF L
Sbjct: 124 LIETLIANGRAYPAPNGDVYYAVREFPGYGKLSGKSLEDLRAGERVEVDVNKRDPFDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP W SPWG GRPGWHIECS MS +LG FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKPGEPSWPSPWGEGRPGWHIECSVMSEHHLGEHFDIHGGGADLQFPHHENEIAQSE 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A N+ ++YW+HNGF+ +D+EKMSKSLGNFFTIR+V+E Y +R F++ HYRSP+N
Sbjct: 244 GAHNHDFVNYWLHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSPLN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS V L+ A + + +Y L + +D N + F +M D
Sbjct: 304 YSDVHLDDAKQSLTRLYTALKNVTATDIAIDWEE-------------NDYARRFRQAMDD 350
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T +A L D +N + QA L++L A VLGL+ E
Sbjct: 351 DFNTVEAMAVLFDLAGEVN----RGESAAQAGLLKALGA----------VLGLLQRAPQE 396
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L + A+L+ D + I+ R AR K + +SD IR +LAA G+ L D GT
Sbjct: 397 FL----QGGSTAAELSADAIEALIQARRDARTAKNWAESDRIRDELAAKGVILEDGAQGT 452
Query: 557 TWRPA 561
TWR A
Sbjct: 453 TWRRA 457
>gi|347540729|ref|YP_004848154.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
gi|345643907|dbj|BAK77740.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
Length = 457
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/485 (46%), Positives = 299/485 (61%), Gaps = 32/485 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++R++E+ KP GK MYVCG+T YD H+GHAR+ V FD++ R+LR GY++ Y
Sbjct: 4 LYNTLTRQKEVFKPITPGKASMYVCGMTVYDYCHLGHARMVVVFDMVARWLRATGYDLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RA E GE +L+ R+ + ++D L + P EPR ++H+P +I
Sbjct: 64 VRNITDIDDKIIKRAAENGEPIQALTARFIDAMNEDFDALGVIHPDFEPRATEHVPGMIA 123
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+I ++ NG AY +GDVY++V +FP YG+LSG+ LED RAGERV VD K++P DF L
Sbjct: 124 LIETLIANGRAYPAPNGDVYYAVREFPGYGKLSGKSLEDLRAGERVEVDVNKRDPFDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP W SPWG GRPGWHIECS MS +LG FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKPGEPSWPSPWGEGRPGWHIECSVMSEHHLGEHFDIHGGGADLQFPHHENEIAQSE 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A N+ ++YW+HNGF+ +D+EKMSKSLGNFFTIR+V+E Y +R F++ HYRSP+N
Sbjct: 244 GAHNHDFVNYWLHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSPLN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS V L+ A + + +Y L + +D N + F +M D
Sbjct: 304 YSDVHLDDAKQSLTRLYTALKNVTATDIAIDWEE-------------NDYARRFRQAMDD 350
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T +A L D +N + QA L++L A VLGL+ E
Sbjct: 351 DFNTVEAMAVLFDLAGEVN----RGESAAQAGLLKALGA----------VLGLLQRAPQE 396
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L + A+L+ D + I+ R AR K + +SD IR +LAA G+ L D GT
Sbjct: 397 FL----QGGSTAAELSADAIEALIQARRDARAAKNWAESDRIRDELAAKGVILEDGAQGT 452
Query: 557 TWRPA 561
TWR A
Sbjct: 453 TWRRA 457
>gi|317152040|ref|YP_004120088.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316942291|gb|ADU61342.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 485
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/482 (43%), Positives = 300/482 (62%), Gaps = 3/482 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++RK++ P+ V MYVCG+T YDL HIGHAR V FDVLYRYLRH GY+V +
Sbjct: 3 LYNTLARKKQEFVPENGNAVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLRHKGYDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RNFTD+DDKII RANE+G++ +++ ++ EF+ DM L L VEP+ ++H+P +I
Sbjct: 63 IRNFTDIDDKIINRANEVGKEAAAIAEQFIGEFYVDMDRLGVLRADVEPKCTEHIPEMIA 122
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ +++ AY GDVYF V F YG+LSGR +++ +G R+ K++P DFAL
Sbjct: 123 LTARLIGQDHAYATPSGDVYFRVRSFAGYGKLSGRNIDELESGARIDPGEEKQDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWGPGRPGWH+ECSAMS Y DIHGGG DL FPHHENEIAQS
Sbjct: 183 WKAAKPGEPSWESPWGPGRPGWHLECSAMSEKYAPLPLDIHGGGQDLSFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA ++W+HNGFV I+SEKMSKSLGNFFTIR +++ + P LR FL+ HYRSP++
Sbjct: 243 AATGKPFANFWVHNGFVQINSEKMSKSLGNFFTIRDILDKFLPETLRYFLLTMHYRSPLD 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
+S LE A + I IY L + L+ + K P + ++ + +M D
Sbjct: 303 FSFDALEEAEKGIRRIYAALAQADAELA--KTSWKKSPFPEEMTAELDAIERHWAEAMED 360
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D++T L + ++ + + +K + L ++ + VLG+ +
Sbjct: 361 DMNTAGALGHVFSAIRLAGRVTEDKTLRKAEGGRDFLLRIKADMAAWSEVLGIFGRDPAG 420
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L +LR+ RA + +V ++ R AR++K++ KSDAIR +LAA+ + + D+P G
Sbjct: 421 FLAELRDNRAARAGIDPTRVQALLDARQQARQDKDFAKSDAIRDELAAMHVEVKDTPQGA 480
Query: 557 TW 558
TW
Sbjct: 481 TW 482
>gi|358012794|ref|ZP_09144604.1| cysteinyl-tRNA synthetase [Acinetobacter sp. P8-3-8]
Length = 473
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/488 (46%), Positives = 304/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G+ V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVKY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARANE GE +L+ R+ + D L CL P PR +D++ + +
Sbjct: 66 VRNITDIDDKIIARANENGESISALTERFIIAMNDDAARLGCLEPDEAPRATDYIDQMQN 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V+KF +YG+LSGRKLED +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGTAYPSENGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ + +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTDEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSIN-KFHNDFLAS 433
+N+S L+ A + Y A + TVT+++ F F A+
Sbjct: 306 VNFSDFALKEAKTTLSRFYHAF------------KAYQQVYGTKTVTTLDTSFVERFNAA 353
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
MSDD +T +A L + +K +N + + + QA S T+R++ +L L+
Sbjct: 354 MSDDFNTAEAIAVLFEIIKELNRAV-KEENEAQATIFYS------TLRHLTHILALVQYD 406
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L + ++ L+E ++ I+ R A+KNK++ +DAIR+ L G+ L D+
Sbjct: 407 VDEFLKS--DIGQEQLGLSEAEIEDLIQQRVDAKKNKDFANADAIRQSLLDQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|237808667|ref|YP_002893107.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
gi|259511845|sp|C4LG04.1|SYC_TOLAT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|237500928|gb|ACQ93521.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
Length = 463
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/488 (47%), Positives = 303/488 (62%), Gaps = 33/488 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY+V
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVVRYLRYLGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TDVDDKII RA E E +L+ R + H D L P +EPR + H+ I
Sbjct: 62 TFVRNITDVDDKIIKRAAENAESCDALTERLIGDMHADFDALKLQRPDIEPRATQHIGEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ +LD +AY D GDV FS+D FPEYG+LSG+ +E +AG RV V+ K+NP DF
Sbjct: 122 ITLVQSLLDQNYAYVADSGDVLFSIDSFPEYGRLSGQNIEQLQAGARVDVEESKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W+SPWG GRPGWHIECSAM++ +LGH FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPMWDSPWGAGRPGWHIECSAMNSKHLGHHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+++Y +R FL+ HYRSP
Sbjct: 242 SCCAHHTPYVNTWMHSGMVMVDEEKMSKSLGNFFTIRDVLKVYDAETVRYFLMSGHYRSP 301
Query: 375 INYSVVQLESAS---ERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
+NYS + L+ A ER++ + + D E+ +L S P F F
Sbjct: 302 LNYSDLNLQQARASLERLYTALRGVEDGEEQAAL--------SAP---------FDERFK 344
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A+M DD +T + L D + +N KQ +++ AL +R + VLGL+
Sbjct: 345 AAMDDDFNTPEAYSVLFDLARDLNR-------AKQDSPADAV-ALAACLRRLGGVLGLLQ 396
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
E LQ A + D+ E ++L I+ R AR +K + +D R L +GI L D
Sbjct: 397 Q-QPEQFLQ-SGAAAETDDVAEIELL--IKTRNDARASKNWALADEARNKLTEMGIVLED 452
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 453 GPQGTTWR 460
>gi|240103606|ref|YP_002959915.1| cysteinyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
gi|259511844|sp|C5A739.1|SYC_THEGJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|239911160|gb|ACS34051.1| Cysteinyl-tRNA synthetase (cysS) [Thermococcus gammatolerans EJ3]
Length = 476
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/482 (45%), Positives = 295/482 (61%), Gaps = 14/482 (2%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E KP EG+V MYVCG T YD H+GHAR Y+ FDV+ RYL H GY V
Sbjct: 5 IYNTLTRQKEEFKPLHEGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGYTVLM 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTD+DDKII RANE GEDP L+ ++ F +DM L P + PRV++HM II
Sbjct: 65 VMNFTDIDDKIIKRANETGEDPKELAEKFLRIFLEDMKALKVKPADIYPRVTEHMQDIIS 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++ + G+AY VYF V KF +YG+LS KLED G RV K+NP DFALW
Sbjct: 125 FIKKLQEKGYAYEGSDGVYFEVRKFKDYGKLSKIKLEDLVKGARVEPGEGKRNPEDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K AK GEP WESPWG GRPGWHIECS MS+ YLG SFDIHGGG DL+FPHHENEIAQS A
Sbjct: 185 KKAKPGEPKWESPWGEGRPGWHIECSTMSSKYLGESFDIHGGGNDLIFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ + YW+H GF+ ++ EKMSKSLGNF T+R++++ Y+P +RLF++ HYRSP++Y
Sbjct: 245 CFGHEWVHYWMHTGFLMVNGEKMSKSLGNFVTVRELLKRYNPEVIRLFVLQRHYRSPLDY 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S +E A + +Y TL + A+S + + D +I F +M DD
Sbjct: 305 SEEGIEHAKNNLERLYNTLENIRVAMSKAEISFRWDEPEFRAYEAIRDARKKFYEAMDDD 364
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T L A+ + IN L + K+++ L + ++V V GL + E
Sbjct: 365 FNTAEALKAVFEVSNAINRYLTEVEKPKESI----LRKAWEFFKDVGEVFGLFEDYFKE- 419
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
++A+ E+ + +E R RK K+++ +D IR++L +GI L D+P GT
Sbjct: 420 ---------QKAENDEELINLLVEVRAQLRKEKKFDLADKIREELRKLGIQLEDTPQGTV 470
Query: 558 WR 559
W+
Sbjct: 471 WK 472
>gi|336323676|ref|YP_004603643.1| cysteinyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
gi|336107257|gb|AEI15075.1| cysteinyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
Length = 477
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/494 (43%), Positives = 312/494 (63%), Gaps = 33/494 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++ +E+ +P + V MYVCGVT YD H+GHAR V FD RY+++ GY+V
Sbjct: 2 LKIYNTLNACKEIFEPINDNNVNMYVCGVTVYDKCHVGHARSAVVFDTARRYMKYRGYKV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTD+DDKII ++ E G ++ +Y E DM L+ P EP+ +D++ +
Sbjct: 62 TFVKNFTDIDDKIINKSKETGISWKEITEKYIREHDYDMNKLNVKKPDYEPKATDYIDDM 121
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I++ +++++ G AY +DGDVYF V F EYG+LS R +E+ +AG R+ + K++P DFA
Sbjct: 122 IELCSKLIEKGNAYEIDGDVYFRVKSFQEYGKLSNRDIEELKAGTRIELRDNKEDPLDFA 181
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK +KEGEP WESPWG GRPGWHIECS MS+ LG FDIHGGG DL+FPHHENEIAQS
Sbjct: 182 LWKKSKEGEPGWESPWGKGRPGWHIECSVMSSKILGLPFDIHGGGKDLIFPHHENEIAQS 241
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A+C YW+HNGFV I+ EKMSKSLGNFFTIR ++E + P +LR FL+ THYRSP+
Sbjct: 242 EASCGCQFAKYWMHNGFVNINKEKMSKSLGNFFTIRDIIEEFEPESLRYFLLTTHYRSPL 301
Query: 376 NYS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINK-FHNDFL 431
++S +++ ESA +RI+ + ++ + A K D V SI + F DF+
Sbjct: 302 DFSEDKLIEAESALDRIYTLIDSM--------VTYKAGRKGKNLLDEVNSIKEHFEKDFI 353
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTV----L 487
+M DD +T L+ + + ++ +N LL + K ES +L+ ++L + L
Sbjct: 354 EAMDDDFNTAAALSVIFEYIRKMNVLLENKPDK------ESFKSLKNQFNDILEIVRSTL 407
Query: 488 GLMSTGYSEVLLQLREKALKRADLT--EDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAV 545
G+ + + RA+L+ E ++ ++I R RKNKE++K+D IR +L
Sbjct: 408 GIAAKTPEDWF---------RANLSIPEKELFEKINQRNEYRKNKEFDKADKIRDELEKK 458
Query: 546 GIALMDSPVGTTWR 559
G+ L+D+P GT +R
Sbjct: 459 GVELLDTPEGTKYR 472
>gi|359396712|ref|ZP_09189763.1| Cysteinyl-tRNA synthetase [Halomonas boliviensis LC1]
gi|357969390|gb|EHJ91838.1| Cysteinyl-tRNA synthetase [Halomonas boliviensis LC1]
Length = 468
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/486 (44%), Positives = 301/486 (61%), Gaps = 26/486 (5%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
+ + +YNT++R++E P GKV MYVCG+T YD H+GHARV V FD++ RYLR GY
Sbjct: 3 SHMHIYNTLTRRKEPFTPLEAGKVSMYVCGMTVYDYCHLGHARVMVAFDIITRYLRERGY 62
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
+V YVRN TD+DDKI+ RA+E GE +L+ R + H+D L LPPS EPR + H+
Sbjct: 63 DVNYVRNITDIDDKILKRADENGESITALTERMIDAMHEDEARLFVLPPSHEPRATGHIE 122
Query: 194 HIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
I+ MI +++ GFAY D GDVY+ V KF YG+L+ R+L+D R+G RV VD K++P
Sbjct: 123 DIVAMIETLIEKGFAYAADNGDVYYRVRKFANYGKLNNRQLDDMRSGARVDVDVHKEDPL 182
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DF LWK+AK GE W SPWG GRPGWHIECSAMS LG +FDIHGGG DL FPHHENEI
Sbjct: 183 DFVLWKAAKPGEAHWASPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEI 242
Query: 313 AQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
AQS AA ++++ W+H G V ++ EKMSKSLGNFFTIR V+ + P +R L+ +HYR
Sbjct: 243 AQSEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRFLLVASHYR 302
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
SPINYSV L A + + +Y L E + DAA+ + F
Sbjct: 303 SPINYSVDSLTEARKSLTRLYTALEGLEPGEANRDAAS--------------AYRERFTQ 348
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
M DD +T LA + + + +N R + Q + +A ++ + ++LGL+
Sbjct: 349 VMDDDFNTPEALAVMFELAREVN-----RAKQDQPVEAAKMAG---ELKQLGSILGLLQQ 400
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
L +++ + L+E ++ +I R A+ NK++ ++DAIR +LAA+GI L DS
Sbjct: 401 VPQTFLKGTQQQGMP---LSESEIEAKIAQRIEAKTNKDFAQADAIRDELAAMGIILKDS 457
Query: 553 PVGTTW 558
GT+W
Sbjct: 458 REGTSW 463
>gi|410658554|ref|YP_006910925.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. DCA]
gi|410661541|ref|YP_006913912.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. CF]
gi|409020909|gb|AFV02940.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. DCA]
gi|409023897|gb|AFV05927.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. CF]
Length = 487
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/493 (45%), Positives = 306/493 (62%), Gaps = 25/493 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++R++E P+ GK MY CG T Y+ H+G+AR+ V FD++ RYL H G+ V Y
Sbjct: 5 LYNTLTRRKEAFVPREPGKASMYACGPTTYNYFHLGNARMLVVFDMVRRYLIHKGFVVTY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII RA E G DPI+L+ +Y E+ D L+ LP + P+ ++H+P +ID
Sbjct: 65 VQNFTDVDDKIINRAAEEGCDPIALAGKYINEYFTDAKALNILPADIHPKATEHIPEMID 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I ++ + G AY +DGDVYF+VDKFP YG+LSGR LED +AG RV VD +K NP DFALW
Sbjct: 125 IIRRLEEKGLAYNIDGDVYFAVDKFPGYGKLSGRTLEDMQAGARVEVDDKKHNPMDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K AK GEPFWESPWG GRPGWHIECSAMS YLG FDIHGGG DLVFPHHENEIAQS
Sbjct: 185 KKAKAGEPFWESPWGKGRPGWHIECSAMSLKYLGPGFDIHGGGGDLVFPHHENEIAQSEG 244
Query: 318 ACNNSHIS-YWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
+ YW+HN F+TI+ EKMSKSLGNFF +R V + +R +L+GTHYRSP++
Sbjct: 245 CLEGQQFARYWMHNAFITINQEKMSKSLGNFFLVRDVTGKFPGDVIRFYLLGTHYRSPLD 304
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALS--------LLDAAALKDSIPPDT--VTSINKF 426
+ +L AS+ + + ++ ++AL A+ + D + +
Sbjct: 305 FDDEKLVMASKGLDRLKNSVRLAKEALGKAQGKEGMTFGIIAVNRDLKTDNEMAQACLEA 364
Query: 427 HNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTV 486
N F +M DD ++ AAL + K IN L K ++ ESL +T+ + +
Sbjct: 365 RNAFEQAMDDDFNSAQAYAALFELAKGINTYL-----AKGSIETESLTEAAQTLIELAGI 419
Query: 487 LGLMSTGYSEVLLQLREKALKRADLTEDQVLQRI-EDRTVARKNKEYEKSDAIRKDLAAV 545
LG +E+ L+E + K A QV++ + E R AR+NK++ +D IR + +
Sbjct: 420 LGFDLEAEAEM---LQEDSGKLA-----QVMELVMEIRANARRNKDWTTADLIRDRIKEI 471
Query: 546 GIALMDSPVGTTW 558
GI + D+P G W
Sbjct: 472 GIVIEDTPEGARW 484
>gi|392392061|ref|YP_006428663.1| cysteinyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC
51507]
gi|390523139|gb|AFL98869.1| cysteinyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC
51507]
Length = 477
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/484 (44%), Positives = 300/484 (61%), Gaps = 13/484 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NTMS ++E P+ EGKVGMY CG T Y+ H+G+ R+ V FD++ RYL + GY+V
Sbjct: 3 LRLFNTMSHQKEEFIPREEGKVGMYTCGPTVYNYFHVGNGRMLVVFDMIRRYLLYKGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTD+DDKII R +E G DP+ L+ +Y EE+ +D L+ +P S+ P+ +DH+P +
Sbjct: 63 TFVQNFTDIDDKIINRGHEEGRDPLELAEKYIEEYFKDAKALNLMPASIHPKATDHIPEM 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I++I + + G AY V+GDVYF+VDK YG+LSGR LED +AG RV V RK+NP DFA
Sbjct: 123 IEIIKGLEEQGLAYAVEGDVYFAVDKLSAYGKLSGRTLEDMQAGARVEVGERKRNPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+AK GEPFWESPWG GRPGWHIECSAMS YLG FDIHGGG DLVFPHHENEIAQS
Sbjct: 183 LWKNAKPGEPFWESPWGKGRPGWHIECSAMSLKYLGSGFDIHGGGGDLVFPHHENEIAQS 242
Query: 316 CAACNNSHIS-YWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
+ + YW+HN F+T + +KMSKSLGNFFT+R+++E + +R +L+GTHYRSP
Sbjct: 243 EGYLHGETFARYWMHNAFLTFNQQKMSKSLGNFFTVREILEHFPGEVIRFYLLGTHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+++ L A + + + ++ ++AL A + + + +F +M
Sbjct: 303 LDFDDENLRMAQKGLERLQTSIRLADEALGRKGQACADAAADEKLRDAAEEARKEFEEAM 362
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ + A+L + K IN + E L T+ + VLG
Sbjct: 363 DDDFNSALAYASLFELGKVINAHVQA-----YPYSSEGLLKARGTLWKLADVLGFDLANP 417
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ + EK + DL +E R +ARK K++E SD IR L +GI L D+P
Sbjct: 418 ANKVEAGNEKLEQVMDLL-------LEVRAIARKKKDWEMSDLIRDRLKDLGIVLEDTPQ 470
Query: 555 GTTW 558
G W
Sbjct: 471 GARW 474
>gi|407716366|ref|YP_006837646.1| cysteinyl-tRNA synthetase [Cycloclasticus sp. P1]
gi|407256702|gb|AFT67143.1| Cysteinyl-tRNA synthetase, class Ia [Cycloclasticus sp. P1]
Length = 463
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/493 (47%), Positives = 310/493 (62%), Gaps = 40/493 (8%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
+ L ++NT+++++E P +G+V +YVCG+T YD HIGHARV V FDV+ RYL++LGY
Sbjct: 2 SALKIHNTLTKQKETFVPINKGEVNLYVCGMTVYDFCHIGHARVMVVFDVVSRYLKYLGY 61
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
V YVRN TD+DDKII R+ E GED L++R+ +E HQD L+ L P +EP +D M
Sbjct: 62 NVKYVRNITDIDDKIITRSIESGEDFKQLTKRFIDEMHQDEASLNVLSPDIEPLATDSME 121
Query: 194 HIIDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
II MI Q++ N AY + DVY+ V+ F YGQLSGRKL+D AGERV VDS K+NP
Sbjct: 122 AIITMIEQLIANDNAYVGPNNDVYYCVESFENYGQLSGRKLDDMNAGERVDVDSSKRNPF 181
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DF LWKSAK EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGGMDL FPHHENEI
Sbjct: 182 DFVLWKSAKPDEPSWSSPWGNGRPGWHIECSAMATCCLGNHFDIHGGGMDLQFPHHENEI 241
Query: 313 AQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
AQS AA +++ W+HNGFV ID EKMSKSLGNFFT+R V++ Y +R F++ +HYR
Sbjct: 242 AQSEAATGEKYVNTWMHNGFVRIDDEKMSKSLGNFFTVRDVLKKYRGEEIRFFVLSSHYR 301
Query: 373 SPINYSVVQL---ESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHND 429
SP+NYS QL SA ER++ +L D +K+ + T I +F N
Sbjct: 302 SPLNYSDDQLTESRSALERLY------------TALRDVTPVKNEVKS---TYIEQFEN- 345
Query: 430 FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTV--- 486
+M+DD ++ +A L + +N L HT+ +QA KT ++LT+
Sbjct: 346 ---AMNDDFNSAKAIAVLFECANELNKLKHTQ--PEQAA---------KTAADLLTMAEP 391
Query: 487 LGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVG 546
LGL+S + L L+ A + A ++ +++ +I R A+ NK + +D IR L G
Sbjct: 392 LGLLS---QDPDLFLKSMAGQDASISNEEIEAQINQRLEAKANKNWGLADQIRDSLKEQG 448
Query: 547 IALMDSPVGTTWR 559
+ L D TTWR
Sbjct: 449 VILEDKGPETTWR 461
>gi|262376233|ref|ZP_06069463.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
gi|262308834|gb|EEY89967.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
Length = 473
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/488 (45%), Positives = 303/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+VEG++ +YVCG+T YD HIGHAR V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRVEGQIDLYVCGMTVYDYCHIGHARTVVAFDYIIRFLRSQGWKVKY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L+ R+ + ++D L CL P V P+ +D++ +
Sbjct: 66 VRNITDIDDKIIKRANENGESISELTSRFIDAMNEDFAKLGCLAPDVAPKATDYIDQMQA 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI ++D G AY +GDVYF V+KF +YG+LSGRKLED +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVDKGTAYPSNNGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGADLTFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR V+E +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHAGFINVDGEKMSKSLGNFFTIRDVIEKFHPEVVRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS V L+ A + Y + K + L +++ V N A+M
Sbjct: 306 VNYSDVALKEAKNTLSRFYHSF----KTYQAVYGDHLIETLDEALVERFN-------AAM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + ++ A+ T+R++ +LGL+
Sbjct: 355 RDDFNTPEAIAVLFEINKELNRTVKEENAEQAAIYY-------ATLRHLTNILGLVQQNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L + ++AL L+ +Q+ I+ R A+K KE+ ++D IR+ L G+ L D+
Sbjct: 408 DEFLKSDIGQEAL---GLSPEQIEDLIQQRQDAKKAKEFARADEIRQSLLDQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|94265990|ref|ZP_01289713.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
gi|93453456|gb|EAT03872.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
Length = 494
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/488 (44%), Positives = 293/488 (60%), Gaps = 7/488 (1%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
++NT + ++E P + V MYVCG+T YD HIGHAR + FD+LYRYLRH Y+V +
Sbjct: 5 IHNTKTNRKEPFTPLTDNHVRMYVCGITVYDYCHIGHARSVLVFDMLYRYLRHRRYDVTF 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTD+DDKII RA E LS+R+ + FH+DM L PP++EP+ ++H+P +I
Sbjct: 65 VRNFTDIDDKIIKRAAEQQTSCQELSQRFIQAFHEDMAALGTEPPTLEPKATEHLPEMIA 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++ G AY GDVYF V F EYG+LS R L++ R+G R+AV+ K++P DF LW
Sbjct: 125 LIEELIAKGLAYPAGGDVYFRVRNFTEYGKLSHRALDEMRSGARIAVNELKEDPLDFVLW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K +K EP WESPWGPGRPGWHIECSAM YLG +FDIHGGG DLVFPHHENEIAQS
Sbjct: 185 KGSKPEEPAWESPWGPGRPGWHIECSAMGRKYLGETFDIHGGGKDLVFPHHENEIAQSEG 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A ++WIH+GFVTI EKM+KSLGNF TIR V++ Y LRL L THYR+P++Y
Sbjct: 245 ATGKPFANFWIHHGFVTIKDEKMAKSLGNFLTIRDVLKQYPAEVLRLLLFSTHYRNPVDY 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHN---DFLASM 434
S + A + +Y L A+ L A ++ T K N DF +M
Sbjct: 305 SEAAMADAETALSRLYAAL----AAVGKLPAGGAPEATSVITAKDRQKLDNLESDFHQAM 360
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
D ++ L D +K IN + LE L +R + + GL+
Sbjct: 361 DIDFNSAKALGRFFDTVKIINKVRQALPATPATRDLELLRDSAAKLRELGGIFGLLQEDP 420
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L + +E+ L D+T ++ + + R AR+N ++ ++D IR LAA IA+ D P
Sbjct: 421 AAYLARRQERLLAGLDITPGEIEKLLAQRQTARQNGDWAEADRIRDLLAAKKIAIKDGPD 480
Query: 555 GTTWRPAL 562
GT+W L
Sbjct: 481 GTSWEVQL 488
>gi|333908247|ref|YP_004481833.1| cysteinyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
gi|333478253|gb|AEF54914.1| cysteinyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
Length = 460
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/484 (46%), Positives = 304/484 (62%), Gaps = 29/484 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S K+E+ KP EGKVGMYVCG T YD HIGHAR ++FDV+ R++RHLGYE+
Sbjct: 2 LKIYNTLSGKKEIFKPIEEGKVGMYVCGNTVYDFCHIGHARAMISFDVISRFIRHLGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E +L+ R +D + L P EP+ ++ M I
Sbjct: 62 NYVRNITDVDDKIIKRAEENNETTQALTERMIAAQREDELRLGNKMPDREPKATEFMQQI 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ ++D GFAY+ GDVY+ F EYG+L+ RKLED AG R+ V++ K++PADF
Sbjct: 122 IDMVQVLIDKGFAYQGTSGDVYYRATAFKEYGKLNNRKLEDMLAGARIDVETAKEHPADF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GE WESPWG GRPGWHIECSAMS LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKQAKVGEVAWESPWGLGRPGWHIECSAMSTNCLGSHFDIHGGGPDLKFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +++YW+H G V +++EKMSKSLGNFFT+R V+E Y+P +R ++ + YRSP
Sbjct: 242 SEAATGKDYVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLEKYNPEVVRYLMVSSQYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
I+YS Q+L++ + AL L A + S+ + V S ++ F +M
Sbjct: 302 IDYSD--------------QSLNEAKVALERLYTALRQQSVAEEWVAS--EYTARFEEAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T V ++ L + ++ +N K +A + A L ++++ ++LGL+
Sbjct: 346 QDDFNTPVAVSVLFELVRELN--------KAKAEESDKAANLAAELKSLASLLGLLDQ-V 396
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ + A L E + I++RT ARK+K + +SD IR LA GI L+DS
Sbjct: 397 PEYFLQ---NSTITAGLDESAIQALIDERTQARKDKNFARSDEIRDQLADQGIELLDSRE 453
Query: 555 GTTW 558
GTTW
Sbjct: 454 GTTW 457
>gi|262039625|ref|ZP_06012919.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
gi|261746382|gb|EEY33927.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
Length = 505
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/501 (42%), Positives = 310/501 (61%), Gaps = 25/501 (4%)
Query: 73 STQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLG 132
++ LYNTMS K E KP EGKV MYVCG T Y+ H+G+AR V FD+L RY ++ G
Sbjct: 9 ENKMNLYNTMSNKIEEFKPIEEGKVKMYVCGPTVYNYIHLGNARPVVIFDILARYFKYRG 68
Query: 133 YEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHM 192
Y+V YV+NFTDVDDKII RANE G P ++ +Y + F +D L+ L P+V+++M
Sbjct: 69 YDVTYVQNFTDVDDKIIKRANEEGISPKEVTEKYIQGFFEDTELLNILQDIKRPKVTENM 128
Query: 193 PHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
P II+ I ++++NG+AY +DG+V+F V K+ +YG+LS +K+++ G RV + K NP
Sbjct: 129 PEIIETIEKLIENGYAYEIDGNVFFDVKKYEDYGKLSNQKIDELEIGARVDIMEIKNNPL 188
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DFALWK KEGEP+W+SPWG GRPGWHIECSAMS YLG +FDIHGGG DL+FPHHENEI
Sbjct: 189 DFALWKKKKEGEPYWDSPWGQGRPGWHIECSAMSKKYLGETFDIHGGGQDLIFPHHENEI 248
Query: 313 AQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
AQS A + YW+HNGFV ++ +KMSKS GNFF +R+++ + +RLF++ THYR
Sbjct: 249 AQSKCAYHGHFAKYWVHNGFVQVNGDKMSKSTGNFFLLREILGKFSGNVIRLFILSTHYR 308
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINK------- 425
P+N+S +E+ + + + ++ EK+L L + + + + + INK
Sbjct: 309 KPVNFSFEDMENTKKTLQNVISSIRRFEKSLEKLSSGIKSEDVSDEKINEINKVFKEKIK 368
Query: 426 -FHNDFLASMSDDLHTTVVLAALSDPLKTIN----DLLHTRKGKKQAMRLESLAALEKTI 480
F F+ +M +D++T L+ + D ++ N D+ ++ ALE +
Sbjct: 369 SFDVKFIGAMDEDMNTPQALSTIFDQIRETNRFCDDIEKILDKERNDSSFLLFEALELSY 428
Query: 481 RNVLT----VLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSD 536
+N+ T VLG +L + EK + DL+++ + I+ RT ARK K + SD
Sbjct: 429 KNLKTKIEDVLG---------VLLMDEKKENKDDLSKNLIELLIKIRTEARKEKNFSLSD 479
Query: 537 AIRKDLAAVGIALMDSPVGTT 557
IR +L +G+ + D+ GTT
Sbjct: 480 EIRDELKKIGVEIKDNKDGTT 500
>gi|302341971|ref|YP_003806500.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
gi|301638584|gb|ADK83906.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
Length = 483
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/487 (46%), Positives = 293/487 (60%), Gaps = 12/487 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT SR++E P G V +YVCGVT YD HIGHAR YV FD + R+ G+ V
Sbjct: 3 LVVYNTQSRRKEEFIPLEPGVVRVYVCGVTVYDDPHIGHARCYVAFDAMVRHFLAKGWRV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRNFTD+DDKII RA E G L+ +Y E F QDM L LPPS EPR ++H+ +
Sbjct: 63 NYVRNFTDIDDKIIRRAAESGLGWRELADKYIESFRQDMAALDVLPPSHEPRATEHIAEM 122
Query: 196 IDMITQILDNGFAYRVDG-DVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I I ++ G AY+++G DV F+V+ F YG+LS R LED +AG RV VD RKKNP DF
Sbjct: 123 IATIQTLMAKGHAYQIEGGDVLFAVESFDGYGKLSRRNLEDMQAGARVEVDPRKKNPMDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK++K GEP W+SP GPGRPGWHIEC+AMS YLG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 183 VLWKASKPGEPSWDSPLGPGRPGWHIECTAMSGKYLGQTFDIHGGGEDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
A + YW+HNGFV ++ EKMSKSLGNFFTI+ ++++ P ALRLFL+ HYRSP
Sbjct: 243 GEACTGHPLAHYWLHNGFVRVNHEKMSKSLGNFFTIKDILKITRPEALRLFLLSKHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEK--ALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
+++S ++ A + +Y L ++ A LDAA I ++F A
Sbjct: 303 LDFSDAAIKEAGAGLERLYTALQAAQERAAAGPLDAAGQA------LAAEIQALADEFEA 356
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
M DD +T + AL + N L G + LE A + +R + LGL+
Sbjct: 357 GMDDDFNTARAIGALFGLARLGNKLAAEPDGPAKGPLLELCA---RRLRELGGRLGLLRI 413
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+E + + + + I R ARK+K + ++D IR L A+G+ L DS
Sbjct: 414 DPAEFFRGAAGQTATQGGVGAADIEALIAQRNQARKDKNFAEADRIRDQLKAMGVTLQDS 473
Query: 553 PVGTTWR 559
P GTTWR
Sbjct: 474 PQGTTWR 480
>gi|383457378|ref|YP_005371367.1| cysteinyl-tRNA synthetase [Corallococcus coralloides DSM 2259]
gi|380732503|gb|AFE08505.1| cysteinyl-tRNA synthetase [Corallococcus coralloides DSM 2259]
Length = 489
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/492 (44%), Positives = 305/492 (61%), Gaps = 6/492 (1%)
Query: 72 ASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHL 131
A + L+NTMS ++E ++P V G+V +YVCG T Y HIG+AR + +FDV+ RYLR+
Sbjct: 2 APPSIRLFNTMSMQKEPLEPLVPGEVKVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRYR 61
Query: 132 GYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDH 191
G++V YVRN+TDVDDKII A+E GE P+ L+ R+ E F +D LH P V PRVS+
Sbjct: 62 GFKVTYVRNYTDVDDKIIKAAHETGEAPVDLASRFVEAFREDARALHLREPDVSPRVSET 121
Query: 192 MPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNP 251
+P I+ +I ++D G+AY GDVYF+VDK +Y +LS R L+D GERV K+ P
Sbjct: 122 IPEIVAIIQTLVDKGYAYEAKGDVYFAVDKDEDYAKLSKRNLDDLCQGERVQPGDLKRQP 181
Query: 252 ADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
DFALWK+AK GEP W+SPWG GRPGWHIECSAMS +LG +FDIHGG +DL+FPHHENE
Sbjct: 182 LDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSEKFLGRTFDIHGGALDLIFPHHENE 241
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS +A + YW+H GF+ ++ KMSKSLGN +R + ALR F + THY
Sbjct: 242 IAQSESATGQTMAKYWMHCGFLDLEGAKMSKSLGNVVRLRDALAKVDAEALRFFFLSTHY 301
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
R P+N+ L+ A R+ Y Y+TL ++ + A KD +F +F
Sbjct: 302 RHPLNFGEKALQDAEGRMEYFYETLRKVDERV------AGKDFGKGPLHGEPARFLTEFE 355
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
++M DD +T L ALS +N+L K + + +L AL + +R VLGL
Sbjct: 356 SAMDDDFNTAGALGALSGLFGFMNELTDKPPVKDKPLVGRTLQALREQVRETSRVLGLFE 415
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LL+ R++A++ + +V + + +RT AR K++ K+D +R L +G+ +MD
Sbjct: 416 DDPGAWLLRRRDRAVRERGIDVAEVERLLAERTAARAAKDFAKADQVRGALKTLGVDIMD 475
Query: 552 SPVGTTWRPALP 563
+P GT+W+ A P
Sbjct: 476 TPAGTSWKVAAP 487
>gi|24373357|ref|NP_717400.1| cysteinyl-tRNA synthetase CysS [Shewanella oneidensis MR-1]
gi|30316159|sp|Q8EG22.1|SYC_SHEON RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|24347617|gb|AAN54844.1| cysteinyl-tRNA synthetase CysS [Shewanella oneidensis MR-1]
Length = 459
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/488 (46%), Positives = 299/488 (61%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R+++ KP GKVGMYVCGVT YDL HIGH R +V+FD++ RYLR+ GYEV
Sbjct: 2 LKIYNSITRQKQEFKPINPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TD+DDKII RANE ED +L+ R E H+D L+ P EPR + H+ I
Sbjct: 62 NFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMKRPDFEPRATLHIAEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ ++L G AY DGDV FSV FPEYG+LSG+ LE +AG RV VD K+NP DF
Sbjct: 122 IDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V ID EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMIDREKMSKSLGNFFTIRDVLSHYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + +Y + D + L++ A A +F F A+M
Sbjct: 302 INYSEENLKQARAALERLYTAIKDVD--LTVAAAPA-------------EEFVAKFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ IN L T + +AL +++ + VLG
Sbjct: 347 DDDFNTPEAYSVLFDMVREINRLKLT--------DMAEASALAVSMKQLADVLG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LL A + + ++D+V + I +R AR K++ +D R L +G+ L D
Sbjct: 393 ---LLHQSPDAFFKGEGSDDEVAEIEALIVERNRARTEKDWPAADVARNRLNELGVVLED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPSGTTWR 457
>gi|89893193|ref|YP_516680.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
gi|219666466|ref|YP_002456901.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
gi|122997351|sp|Q250Q6.1|SYC_DESHY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781676|sp|B8G1U2.1|SYC_DESHD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|89332641|dbj|BAE82236.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536726|gb|ACL18465.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
Length = 477
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 305/485 (62%), Gaps = 15/485 (3%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NTMS ++E KP+ EGKVGMY CG T Y+ H+G+ R+ V FD++ RYL + GY+V
Sbjct: 3 LRLFNTMSHQKEEFKPREEGKVGMYTCGPTVYNYFHVGNGRMLVVFDMIRRYLLYKGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTD+DDKII R E G DP+ L++ Y E+ +D L+ +P S+ P+ +DH+P +
Sbjct: 63 TFVQNFTDIDDKIIKRGQEEGRDPLELAQDYIGEYFKDAAALNLMPASIHPKATDHIPEM 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I++I + + G AY VDGDVYF+VDK P YG+LSGR LED +AG RV V RK+NP DFA
Sbjct: 123 IEIIKGLEEQGLAYAVDGDVYFAVDKLPAYGKLSGRTLEDMQAGARVEVGERKQNPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+AK GEPFWESPWG GRPGWHIECSAMS YLG FDIHGGG DLVFPHHENEIAQ+
Sbjct: 183 LWKNAKPGEPFWESPWGKGRPGWHIECSAMSLKYLGSGFDIHGGGGDLVFPHHENEIAQA 242
Query: 316 CAACNNSHIS-YWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
+ + YW+HN F+TI+ +KMSKSLGNFFT+R+++E + +R +L+GTHYRSP
Sbjct: 243 EGYLHGETFARYWMHNAFLTINQQKMSKSLGNFFTVREILEHFPGEVIRFYLLGTHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+++ L+ A + + + ++ ++AL + + + + +F +M
Sbjct: 303 LDFDDENLQMAQKGLERLQTSIRLADEALGRQGQNSADAASGQKLRAAAEEARREFAEAM 362
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ + A+L + K IN H + + E L T+ + VLG
Sbjct: 363 DDDFNSALAYASLFELGKAIN--AHVQAYPYSS---EGLLKARATLWELADVLGFD---- 413
Query: 495 SEVLLQLREKALKRADLTEDQVLQ-RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L + + DQV++ +E R +ARK K++E SD IR L +GI L D+P
Sbjct: 414 ----LAKPANQAEAGNQKLDQVMELLLEVRAIARKKKDWEMSDLIRDRLKDLGIVLEDTP 469
Query: 554 VGTTW 558
G W
Sbjct: 470 QGARW 474
>gi|410616834|ref|ZP_11327819.1| cysteinyl-tRNA synthetase [Glaciecola polaris LMG 21857]
gi|410163675|dbj|GAC31957.1| cysteinyl-tRNA synthetase [Glaciecola polaris LMG 21857]
Length = 464
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/489 (46%), Positives = 300/489 (61%), Gaps = 33/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++EL P E KVG+YVCG+T YDLSH+GHAR Y++FD++ R+LRH GYEV
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRFLRHKGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RAN+ E L+ R H+D ++ LPP +EPRV+ HMP I
Sbjct: 62 NYVRNITDIDDKIIQRANDNNETTSELTARTIAMMHEDFAAINLLPPDIEPRVTTHMPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I +I +++ NG AY+ GDV F V + +YG+LS + LE G RV VD+ K +P DF
Sbjct: 122 IAIIERLIANGHAYQAKSGDVLFDVSSYRDYGKLSKQDLEQLNMGSRVDVDNDKDDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWKS K GEP W SPWG GRPGWHIECSAM+ +LG FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKSVKPGEPSWASPWGKGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H G V +DSEKMSKSLGNFFT+R V++ + LR FL+ HYRS
Sbjct: 242 SCCAYNTPYVNYWVHTGMVQVDSEKMSKSLGNFFTLRDVLKQHDSETLRYFLMSAHYRSQ 301
Query: 375 INYS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV-TSINKFHNDF 430
++YS + Q SA ER++ AL+D + D V + F
Sbjct: 302 LSYSEGNITQARSALERLY------------------TALRDVVASDKVDMQSGDYLVRF 343
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
+M DD +T +A L D + IN +G+ A R +LA + + N+ VLG++
Sbjct: 344 DKAMDDDFNTPEAMAVLFDLARGINKA--KTEGESGAERASNLAGI---LLNLGQVLGIL 398
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
++ L + + A QV I+ R AR K++ +DA R L A+ I L
Sbjct: 399 QRSPNDYLQGDEQGGDESA-----QVEALIKARNDARSAKDWPAADAARDALNALNIVLE 453
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 454 DGPNGTTWR 462
>gi|406980236|gb|EKE01868.1| hypothetical protein ACD_21C00032G0011 [uncultured bacterium]
Length = 459
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/484 (45%), Positives = 301/484 (62%), Gaps = 30/484 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT SR++EL KP KVG+YVCG+T YD HIGH R+++ FDV+ RYLR +GY+V
Sbjct: 2 LHIYNTFSRQKELFKPISTPKVGLYVCGLTVYDNCHIGHGRLFIWFDVVVRYLRSVGYQV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA EL D +L++R + H D L +PP EPRV++H+P I
Sbjct: 62 TYVRNITDIDDKIIKRAQELNIDYQTLTQRMIDSMHTDEKSLDVIPPDFEPRVTEHIPQI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+D+I +++ FAY GDVY+ V KF YG+L+ + L R G RV K++P DF
Sbjct: 122 VDLIQTLINKDFAYVTKTGDVYYEVAKFKAYGKLAHQDLNSLRTGIRVETSEDKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK EPFW SPWG GRPGWHIECSAM+ YLG +FDIHGGG DL FPHH+NE+AQ
Sbjct: 182 VLWKAAKPNEPFWPSPWGNGRPGWHIECSAMAKKYLGENFDIHGGGNDLQFPHHQNELAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++YW+H GFV ++ EKMSKSLGNFF +++ ++ YHP LR F++ +HY+SP
Sbjct: 242 SEAANGCCFVNYWMHMGFVQVNQEKMSKSLGNFFVLKEALKKYHPEILRYFVVASHYQSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
IN+S LE+A + Y TL D L A KD P N+F+ F A+M
Sbjct: 302 INFSENNLENAHAALQRFYITLRD-------LPIANTKDFDPK------NQFNKRFHAAM 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA L D + IN L + A +L A ++++ +LG++
Sbjct: 349 DDDFNTPEALAVLFDLAREINRL-------RNADQLSLAAQHGALLKHLGWILGILQDDP 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L +A + E+++ I R ARK+K + ++D IR +L A+ I L D+P
Sbjct: 402 EKFL---------KAGIDENKIQSLINARNAARKDKNWAEADRIRGELTAMRITLEDTPN 452
Query: 555 GTTW 558
GTTW
Sbjct: 453 GTTW 456
>gi|223478067|ref|YP_002582621.1| cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
gi|214033293|gb|EEB74120.1| Cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
Length = 476
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/482 (45%), Positives = 291/482 (60%), Gaps = 14/482 (2%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E KP EG+V MYVCG T YD H+GHAR Y+ FDV+ RYL H GY V
Sbjct: 5 IYNTLTRQKEEFKPLREGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGYTVLM 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTD+DDKII RANE GEDP L+ R+ F +DM L P V PRV++HM II+
Sbjct: 65 VMNFTDIDDKIIKRANETGEDPKELAERFLRIFLEDMKALKVKPADVYPRVTEHMDEIIN 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ ++ + G+AY VYF V KF +YG+LS KLED G RV K+NP DFALW
Sbjct: 125 FVKKLEEKGYAYEGSDGVYFEVRKFKDYGKLSKIKLEDLVKGARVEPGEGKRNPEDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K AK GEP WESPWG GRPGWHIECS MS+ YLG SFDIHGGG DL+FPHHENEIAQS A
Sbjct: 185 KKAKPGEPKWESPWGEGRPGWHIECSTMSSKYLGESFDIHGGGNDLIFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ + YW+H GF+ ++ EKMSKSLGNF T+R++++ Y P +RLF++ HYRSP++Y
Sbjct: 245 CFGHEWVHYWMHTGFLMVNGEKMSKSLGNFVTVRELLKRYDPEVIRLFVLQRHYRSPLDY 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S +E A + +Y TL + A+ + + D +I F +M DD
Sbjct: 305 SEEGIEHAKNNLERLYNTLENIRVAMGRAEISFRWDEPEFRVYEAIRDARRKFYEAMDDD 364
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T L A+ + IN L + K+++ L + R+V V GL + E
Sbjct: 365 FNTAEALKAVFEVSNAINRYLTEVETPKESI----LRKAWEFFRDVGEVFGLFEDYFKE- 419
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
+RA E + IE R RK ++++ +D IR +L +GI L D+P GT
Sbjct: 420 ---------QRAGNEEALIDLLIEVRAQLRKERKFDLADRIRDELRKLGIQLEDTPQGTV 470
Query: 558 WR 559
W+
Sbjct: 471 WK 472
>gi|217973913|ref|YP_002358664.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
gi|254781693|sp|B8E5F2.1|SYC_SHEB2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|217499048|gb|ACK47241.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
Length = 459
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/488 (46%), Positives = 300/488 (61%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R+++ KP GK+GMYVCGVT YDL HIGH R +V+FD++ RYLR+ GYEV
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TDVDDKII RANE E +L+ R E HQD L+ L P EPR + H+ I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ +L G AY DGDV FSV +P+YG+LSG+ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y + D + L++ A A +F F A+M
Sbjct: 302 LNYSEDNLKQARSALERLYTAIKDVD--LTVAAAPA-------------EEFVAKFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ IN L T + +AL T++ + VLGL+S
Sbjct: 347 DDDFNTPEAYSVLFDMVREINRLKLT--------DMAQASALAVTLKQLADVLGLLSQ-- 396
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+A + ++D+V + I +R AR K++ +D R L +G+ L D
Sbjct: 397 -------EPEAFFQGGGSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVELED 449
Query: 552 SPVGTTWR 559
SP GTTWR
Sbjct: 450 SPSGTTWR 457
>gi|406037361|ref|ZP_11044725.1| cysteinyl-tRNA ligase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 473
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 306/489 (62%), Gaps = 27/489 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG++ MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKIIARANE GE L+ R+ + ++D +L C+ P P+ ++++ +
Sbjct: 66 IRNITDIDDKIIARANENGETIQQLTARFIDAMNEDAANLGCVLPDEAPKATEYIDQMQS 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI ++DNG AY +GDVYF V KF +YG+LSGRKLED +AG ERV V+ KK+P DF
Sbjct: 126 MIATLVDNGTAYPAANGDVYFEVTKFDKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINK-FHNDFLAS 433
+N+S L+ A + Y + A + TV ++ + F F A+
Sbjct: 306 VNFSDFALKEAKTALSRFYHSF------------KAYQQMYGQKTVETLEQGFVKRFNAA 353
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T +A L + K +N R K++ E L T+R + +LGL+
Sbjct: 354 MRDDFNTAETMAVLFELNKELN-----RAVKEETA--EQATVLYSTLRYLTNILGLVQHD 406
Query: 494 YSEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
E L + ++AL L++ ++ I+ R A+K K++ ++DAIR+ L G+ L D+
Sbjct: 407 VDEFLKSDIGQEALS---LSDTEIENFIQQRVDAKKAKDFAQADAIRQSLLDQGVVLEDT 463
Query: 553 PVGTTWRPA 561
GT WR A
Sbjct: 464 RQGTIWRRA 472
>gi|254448716|ref|ZP_05062174.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
gi|198261724|gb|EDY86011.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
Length = 463
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/485 (45%), Positives = 302/485 (62%), Gaps = 25/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
+ +YNT+SR +++ +P G+V +YVCG+T YD HIGHARV V FD + RYLRH GY+V
Sbjct: 1 MQIYNTLSRSKQVFEPIHPGQVRLYVCGITTYDYCHIGHARVMVAFDAITRYLRHRGYDV 60
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKI+ RA E GE +L+ R+ + H+D L LPP EPR + H+ I
Sbjct: 61 TYVRNITDIDDKILKRAEENGEAYDTLTARFIDAMHEDERALGVLPPDREPRATQHIQDI 120
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID+I ++D G AY + GDVYFSV F +YG+LS +KLED G RV ++S K++P DF
Sbjct: 121 IDLIQVLIDKGAAYTAENGDVYFSVSDFADYGKLSNKKLEDLLEGVRVELESSKRDPRDF 180
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK A++ + WE+PWG GRPGWHIECSAMS + LG+ FDIHGGG DLVFPHHENEIAQ
Sbjct: 181 ALWKGAQQDQVGWEAPWGYGRPGWHIECSAMSTSCLGNHFDIHGGGPDLVFPHHENEIAQ 240
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G V +D+EKMSKSLGNFFTIR+V+E Y P +R FL+ +HYRSP
Sbjct: 241 SEAATGETYANVWMHAGAVRVDNEKMSKSLGNFFTIREVLEKYQPEVIRYFLLSSHYRSP 300
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS LE A + +Y L + D AAL DS +++ F M
Sbjct: 301 INYSDNSLEQARAGLERLYTALRPYSDVAA--DEAALSDS------SALQAFQQ----VM 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L D + +N +++ ++A KT+ VL +L G
Sbjct: 349 DDDFNTREALSVLFDLARQLN--------QQEGEAARNIAVQLKTLGRVLGLL----EGD 396
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
++ L+ L++D + I +R A++NK++ ++D IR L GI L D P
Sbjct: 397 AQAYLKSGGLVSDAGSLSDDDIDALIAERIEAKQNKDFARADDIRDQLTEAGIQLEDGPA 456
Query: 555 GTTWR 559
GT WR
Sbjct: 457 GTQWR 461
>gi|86157699|ref|YP_464484.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
gi|109894880|sp|Q2IQG7.1|SYC_ANADE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|85774210|gb|ABC81047.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 481
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/483 (49%), Positives = 308/483 (63%), Gaps = 20/483 (4%)
Query: 83 SRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNFT 142
++KRELV P GK+ +YVCG T YD SH+GHAR YV +DV+ R+LR G EV +VRNFT
Sbjct: 11 AQKRELV-PLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRARGLEVRFVRNFT 69
Query: 143 DVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQI 202
DVDDKII RANE GEDPI+L+ R+ + FH+DM L L P VEPRVS H+P I+ +I ++
Sbjct: 70 DVDDKIIQRANERGEDPIALASRFADAFHEDMDALGNLRPDVEPRVSGHIPEIVALIARL 129
Query: 203 LDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAK 261
++ GFAY +GDVY++V KFPEYG+LS R L+D AG RV K++P DFALWK+AK
Sbjct: 130 VERGFAYAPGNGDVYYAVRKFPEYGRLSKRNLDDLIAGARVEPGEAKRDPLDFALWKAAK 189
Query: 262 EGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNN 321
GEP W+SPWG GRPGWHIECSAM+ +LG D+H GG DLVFPHH NEIAQS AA ++
Sbjct: 190 PGEPAWDSPWGKGRPGWHIECSAMTQKHLGAPIDLHAGGKDLVFPHHTNEIAQSVAATSD 249
Query: 322 S-----HISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
YW+HNGFV ID EKMSKSLGNFFTIR V+ + ALR FL+GTHYR N
Sbjct: 250 GLHAEDFARYWMHNGFVQIDDEKMSKSLGNFFTIRDVLARFDGEALRFFLLGTHYRRDFN 309
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
+S L A R+ +Y+T+ E+ A ++ P V A++ D
Sbjct: 310 FSDQVLAEAERRLSALYETVEKAERL-----GAGVEPGAEPAFVERAR-------AALDD 357
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T VL +++ N L RKGKK LAA + R V VLG++ ++
Sbjct: 358 DFNTPQVLGIVAEAFTEAN-ALADRKGKKSPEEKARLAAFARGARAVGAVLGILGRPPAQ 416
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L +R++A R + +V + I +R AR K++ +SDAIR L A G+ LMD P GT
Sbjct: 417 ALSAIRDRAAARRGIDGSEVERLIAERAAARAAKDFARSDAIRDGLLARGVVLMDGPQGT 476
Query: 557 TWR 559
TW+
Sbjct: 477 TWK 479
>gi|405373480|ref|ZP_11028253.1| Cysteinyl-tRNA synthetase [Chondromyces apiculatus DSM 436]
gi|397087739|gb|EJJ18769.1| Cysteinyl-tRNA synthetase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 489
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/484 (46%), Positives = 307/484 (63%), Gaps = 6/484 (1%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
L+NTM+ ++EL++P V G+VG+YVCG T Y HIG+AR + +FDV+ RYLRH G +V Y
Sbjct: 8 LFNTMTMQKELLQPAVPGEVGVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRHRGLKVRY 67
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTDVDDKII A E GE P++L+ R+ E F +D LH L P V PRVSDH+P II
Sbjct: 68 VRNFTDVDDKIIKAAAETGEAPVALAARFVELFREDAKALHLLEPDVAPRVSDHLPEIIA 127
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++D G AY GDVYFSV +Y +LS R L+D G+RV +K+ P DFALW
Sbjct: 128 IIQKLVDKGHAYASQGDVYFSVSSDADYAKLSKRNLDDLCVGDRVQPGEQKREPLDFALW 187
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK GEP W+SPWGPGRPGWHIECSAMSA YLG +FDIHGG +DL+FPHHENEIAQS +
Sbjct: 188 KAAKPGEPAWDSPWGPGRPGWHIECSAMSAKYLGETFDIHGGALDLIFPHHENEIAQSES 247
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A + YW+H GF+ ++ KMSKSLGN +R + P ALR F + THYR P+ +
Sbjct: 248 ANGVTFARYWMHCGFLDLEGAKMSKSLGNVVRLRDALTKVDPEALRFFFLSTHYRHPLAF 307
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L A R+ Y Y+TL ++ + A KD ++F +F ++M DD
Sbjct: 308 SDKALADAEARMEYFYETLRKVDERV------AGKDFGKGPLHGEPHRFFGEFESAMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
++ L +LS +N+L K +A+ +L AL + +R V VLGL
Sbjct: 362 FNSAGGLGSLSGLFGMMNELADKPPVKDKALMGRTLQALREDVRRVSGVLGLFEDAPDAW 421
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
LL+ RE+A++ + V + + +RT AR K++ +D +R +L G+ +MD+P GTT
Sbjct: 422 LLRRRERAVRERGIDVADVERLLGERTAARAAKDFAAADRVRSELKQKGVEIMDTPAGTT 481
Query: 558 WRPA 561
W+ A
Sbjct: 482 WKVA 485
>gi|260892309|ref|YP_003238406.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
gi|260864450|gb|ACX51556.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
Length = 474
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/493 (45%), Positives = 301/493 (61%), Gaps = 31/493 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+++++E P+ G+V MYVCG T Y+ H+G+AR V FD + RYL + G+ V +
Sbjct: 4 VYNTLTKRKEPFVPREPGRVRMYVCGPTTYNYIHLGNARALVVFDTIRRYLEYRGFRVFF 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDKII RA E DP L+ +Y E + +D ++ V PRVSDH+P I++
Sbjct: 64 VQNFTDIDDKIIKRAAEEKMDPQELALKYIEAYFEDADQINIKRADVHPRVSDHLPEIVE 123
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I+ ++D GFAY +GDVYF+V KFP YG+LSGR+L + RAG RV K++P DFALW
Sbjct: 124 LISILIDKGFAYAAEGDVYFAVRKFPAYGKLSGRQLSELRAGARVEPGENKRDPLDFALW 183
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K AK GEP W SPWG GRPGWHIECSAM+ YLG FDIHGGG DL+FPHHENEIAQS A
Sbjct: 184 KKAKPGEPSWPSPWGEGRPGWHIECSAMALKYLGPEFDIHGGGSDLIFPHHENEIAQSEA 243
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A YW+HNGF+T+ EKMSKSLGN F +R+VMELY P A+RLFL+ THYRSP+ Y
Sbjct: 244 ATGRPFARYWLHNGFITVKEEKMSKSLGNVFLLRKVMELYPPPAVRLFLLSTHYRSPLAY 303
Query: 378 SVVQLESASE---RIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+ LE A++ R+ + L + +K A + S + + ++K+ DF A+M
Sbjct: 304 TPEYLEGAAKALSRLRSSWLFLQEAQK-------QAEESSGGTEQLARLDKWEQDFTAAM 356
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA D IN R L L + + L+ +
Sbjct: 357 DDDFNTARALALFFDLAHEINSWAELRP-------LPPAPVLRRAL--------LLWVSF 401
Query: 495 SEVLLQLREK------ALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIA 548
+ VL E+ +R + E+ V +E R AR+ K++ +D IR+ L +GI
Sbjct: 402 NRVLGLFPERRGLPVVEQERTMVLEELVKLLVEIRQEARQRKDWATADRIRESLKNLGIV 461
Query: 549 LMDSPVGTTWRPA 561
L D+P GT WR A
Sbjct: 462 LEDTPAGTRWRWA 474
>gi|289523037|ref|ZP_06439891.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503580|gb|EFD24744.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 475
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/486 (42%), Positives = 315/486 (64%), Gaps = 19/486 (3%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN ++R++E P G++G YVCG T YD HIG+AR +V FD L RY+ + G+EV
Sbjct: 3 LVLYNDLTRRKEEFAPVSPGRIGFYVCGPTVYDYIHIGNARPFVVFDALRRYMEYKGFEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YV+NFTD+DDK+I +AN+LG L+ ++ E + +D++ L +V P+ ++H+ I
Sbjct: 63 IYVQNFTDIDDKMINKANQLGITVKELAEQFIEAYFEDIIPLGVRQATVHPKATEHIDDI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I +I++I++NG AY +DG+VYF V +P YG+LSG+ LE+ +AG R+ VD RK++P DF
Sbjct: 123 IRLISRIIENGHAYIIDGNVYFDVKSYPNYGKLSGQSLEELQAGARIEVDERKRHPLDFV 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+ KEGEP+W+SPWG GRPGWHIECSAM+ YLG + DIHGGG DL+FPHHENEIAQ+
Sbjct: 183 LWKAKKEGEPWWDSPWGHGRPGWHIECSAMAMKYLGDTIDIHGGGSDLIFPHHENEIAQA 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA + +WIHNG++ I+ EKMSKSLGN +R++ + + PLA+RLF++ HYRSP+
Sbjct: 243 EAATGKQFVRFWIHNGYLLINKEKMSKSLGNILNVREIRKNFQPLAVRLFILAAHYRSPL 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTS--INKFHNDFLAS 433
++S L A++ + Q L +C L L ++ PDT +N + F +
Sbjct: 303 DFSDDSLIQATKSL----QRLRNCYSDL-LFYMERSQEKNTPDTWLEDVVNNGYKRFCNA 357
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
+ DD +T L A+ + ++ +N+ L + + ++S E T+ N+L V+G+ + G
Sbjct: 358 LDDDFNTAGALGAVFEVVRDLNNYLKENETLDKQALIKSKDFFE-TVENILGVIGINTIG 416
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E A L+ ++ I++R ARK +++ ++DAIR +LA+ GI L D+P
Sbjct: 417 --------EEFA---GTLSSSEIEGLIKEREAARKKRDFARADAIRNELASKGIILEDTP 465
Query: 554 VGTTWR 559
+GT W+
Sbjct: 466 LGTRWK 471
>gi|284048089|ref|YP_003398428.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
gi|283952310|gb|ADB47113.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
Length = 481
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/492 (44%), Positives = 315/492 (64%), Gaps = 27/492 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YN M+R++E P GKVG+YVCGVTPY+ HIG+AR +V +D + R+L H GY+V Y
Sbjct: 5 VYNDMTRQKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDTIRRFLDHEGYDVTY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII ANE G ++ RY + + + M LH + PRVS+H+P II
Sbjct: 65 VQNFTDVDDKIIRAANEEGVTWDVIANRYIKAYFEVMDKLHVKRAHIYPRVSEHIPDIIH 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ ++++NG+ Y VDGDVY+ V++F YG+LSGRKL+D AG RV VD RK+NP DFALW
Sbjct: 125 TVQELINNGYGYVVDGDVYYRVERFSHYGELSGRKLDDMMAGARVDVDERKENPMDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
KSAK GEP W+SPWG GRPGWHIECS MS YLG++ D HGGG DL+FPHHENEIAQS
Sbjct: 185 KSAKPGEPSWDSPWGKGRPGWHIECSTMSTKYLGNTLDFHGGGSDLIFPHHENEIAQSEG 244
Query: 318 ACN-NSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + + YW+HNGF+TI+ EKMSKSLGNF T+ +++ Y P +R F++ THYRSP++
Sbjct: 245 ATGVHPFVRYWVHNGFITINEEKMSKSLGNFKTVYDLLKEYEPETIRYFILNTHYRSPLD 304
Query: 377 YSVVQLESAS---ERIFYIYQTLHDCEKALSL---LDAAALKDSIPPDTVTSINKFHNDF 430
+S +L A ER+ L + ++ +++ ++ AL+D + + F
Sbjct: 305 FSQERLAEAGRSLERLRTAQNNLQEIQQVITVGPDAESLALRD--------KVEELRKGF 356
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHT---RKGKKQAMRLESLAALEKTIRNVLTVL 487
+MSDD +T++ ++ L K IN + H KK +L + ++K + ++ V+
Sbjct: 357 FDAMSDDFNTSLAISYLFALAKEIN-VYHNAIISGAKKPDGKL--VEQIDKAWKEMIGVI 413
Query: 488 GLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGI 547
G++ ++ A+ E ++ RIE+R ARK +++ K+DAIR +LAA GI
Sbjct: 414 GILE---NQPAANGEGGAVSN---EEAEIAARIEERQAARKARDFAKADAIRDELAAKGI 467
Query: 548 ALMDSPVGTTWR 559
L D+P G W+
Sbjct: 468 ILEDTPQGVRWK 479
>gi|342218372|ref|ZP_08710986.1| cysteine--tRNA ligase [Megasphaera sp. UPII 135-E]
gi|341589784|gb|EGS33046.1| cysteine--tRNA ligase [Megasphaera sp. UPII 135-E]
Length = 481
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/486 (44%), Positives = 309/486 (63%), Gaps = 11/486 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L++YNT++RK+EL KP+ G V +YVCG+TPY+ SH+G+AR +VT+DV+ RYL+HLGYEV
Sbjct: 4 LFVYNTLTRKKELFKPQTPGHVNIYVCGITPYNHSHMGNARPFVTWDVIKRYLKHLGYEV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTDVDDKII AN G +++ RY + + M LH + PRVS+HM I
Sbjct: 64 THVQNFTDVDDKIINAANGEGVSWDTIANRYIASYFEVMDALHVHRADIYPRVSEHMDAI 123
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
MI +++ AY +D DVY+SV+KF YG+LSGR L+D AG R+ V+ +KK+P DFA
Sbjct: 124 FTMIQTLINKNIAYVLDNDVYYSVEKFDGYGKLSGRCLDDMMAGARIEVNDKKKHPMDFA 183
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK AK GEP W+SPWG GRPGWHIECSAMS YLG+SFD HGGG DL+FPHHENEIAQS
Sbjct: 184 LWKGAKPGEPAWDSPWGKGRPGWHIECSAMSHQYLGNSFDFHGGGSDLIFPHHENEIAQS 243
Query: 316 CAACNNS-HISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
A + + YW+HNGF+TI+SEKMSKSL NFF ++ V+ Y P A+R FLI HYRSP
Sbjct: 244 EACFGHEPMVRYWLHNGFITINSEKMSKSLHNFFLVKDVLAYYKPDAVRFFLISNHYRSP 303
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDT-VTSINKFHNDFLAS 433
+++S +L+ + + + ++ + L+LL+ S D + + DF +
Sbjct: 304 LDFSDARLKEMTRSLDRVRTSIVNV---LALLNMPTGSKSAEADNLLQDAKQIMEDFETA 360
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T + A + + K +N +K A+ + +++ R + +LG++
Sbjct: 361 MCDDFNTALASAGIFELAKKVNIYHQAVAQQKVAVDSSVVTEVKRIFRTMTDILGILEDA 420
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ E +++ + A L E ++ R R NK+YE +D+IR L +GI + DSP
Sbjct: 421 WQEQSDDVKQT--EYAALVE----TILDIRNECRANKQYELADSIRNKLTELGIIIEDSP 474
Query: 554 VGTTWR 559
G W+
Sbjct: 475 QGVRWK 480
>gi|114320961|ref|YP_742644.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
gi|114227355|gb|ABI57154.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
Length = 485
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/503 (45%), Positives = 309/503 (61%), Gaps = 33/503 (6%)
Query: 61 GKTDGDDKPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVT 120
G+T G ++ + L ++N++++++E +P G V MYVCG+T YD H+GHAR V
Sbjct: 10 GRTPGINELNRDAGMLHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVV 69
Query: 121 FDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCL 180
FD++ RYLRHLGY V +VRN TD+DDKII RA ELGE +++ R+ H+D L L
Sbjct: 70 FDMVARYLRHLGYRVTFVRNITDIDDKIIRRAAELGEPMGAVTERFIRAMHEDAEALGVL 129
Query: 181 PPSVEPRVSDHMPHIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAG 239
PP EPR + H+ II MI ++++ G AY D GDVYF+V +PEYG+LSG + ED RAG
Sbjct: 130 PPDHEPRATGHIDDIIAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSGERQEDLRAG 189
Query: 240 ERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGG 299
RV VD K++P DFALWK+A+ GEP W SPWG GRPGWHIECSAMS LG FDIHGG
Sbjct: 190 ARVEVDEGKRDPVDFALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGG 249
Query: 300 GMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHP 359
G+DL FPHHENEIAQS A + ++YW+HNG V I+ EKM+KSLGNFFT+R+V+ +
Sbjct: 250 GLDLKFPHHENEIAQSECATGHPFVNYWMHNGHVRINDEKMAKSLGNFFTVREVLSEHRA 309
Query: 360 LALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDT 419
A+RLFL+ +HYRSP+NYS+ L A + +Y AL L A + ++ P
Sbjct: 310 EAVRLFLLSSHYRSPLNYSLDGLRQAQGALERLYL-------ALRGLPEAPVPEADP--- 359
Query: 420 VTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKT 479
F F A+M DD +T LA L + + +N L +Q AA
Sbjct: 360 ----QGFRARFHAAMDDDFNTPEALAVLFELAREVNRL-------RQGDDDAGAAAPGAL 408
Query: 480 IRNVLTVLGLMSTGYSEVLLQLREKALKRADLTED---QVLQRIEDRTVARKNKEYEKSD 536
+R + VLGL+ E+ L+ D D ++ + RT ARKN+++ ++D
Sbjct: 409 LRVLGGVLGLLQDDP--------ERFLRGGDAGGDEDAEIDALVARRTEARKNRDFAEAD 460
Query: 537 AIRKDLAAVGIALMDSPVGTTWR 559
IR +LA GI L D P GTTWR
Sbjct: 461 RIRDELAERGIILEDGPQGTTWR 483
>gi|336311084|ref|ZP_08566052.1| cysteinyl-tRNA synthetase [Shewanella sp. HN-41]
gi|335865499|gb|EGM70522.1| cysteinyl-tRNA synthetase [Shewanella sp. HN-41]
Length = 459
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 300/488 (61%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R+++ KP GK+GMYVCGVT YDL HIGH R +V+FD++ RYLR++GYEV
Sbjct: 2 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TDVDDKII RANE E +L+ R E H+D L+ L P EPR + H+ I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIEEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ ++L+ G AY DGDV FSV +P+YG+LSG+ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVERLLERGHAYVAADGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDENKQNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y + D + L AA +F F A+M
Sbjct: 302 LNYSEENLKQARAALERLYTAIKDVD-----LTVAA----------DPAEEFVAKFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ IN L T K +AL ++ + VLGL+S
Sbjct: 347 DDDFNTPEAYSVLFDMVREINRLKTTDIAKA--------SALAVAMKQLADVLGLLSQDP 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
S A + + ++D+V + I +R AR K++ +D R L +G+ L D
Sbjct: 399 S---------AFFKGEGSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVVLED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPSGTTWR 457
>gi|212223750|ref|YP_002306986.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
gi|229558797|sp|B6YUQ3.1|SYC_THEON RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212008707|gb|ACJ16089.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
Length = 476
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/483 (45%), Positives = 292/483 (60%), Gaps = 16/483 (3%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+++++E +P EG+V MYVCG T YD +H+GHAR Y+ FDV+ RYL H GY V
Sbjct: 5 VYNTLTKQKEEFRPLREGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHRGYTVLM 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTD+DDKII RANE GEDP L+ ++ F +DM L P + PRV++H+ IID
Sbjct: 65 VMNFTDIDDKIIRRANETGEDPKELAEKFLRYFLEDMKALKVKPADIYPRVTEHIQDIID 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ ++ + G+AY + VYF V KF +YG+LSG KLE+ G RV KKNP DFALW
Sbjct: 125 FVRKLQEKGYAYEGNDGVYFEVRKFKDYGKLSGIKLEELVKGARVEPGEGKKNPEDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K AK GEP WESPWG GRPGWHIECS MS YLG SFDIHGGG DL+FPHHENEIAQS A
Sbjct: 185 KKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ + YW+H GFV + EKMSKSLGNF TIR++++ Y P +R F++ HYRSP++Y
Sbjct: 245 CTGHEWVRYWLHTGFVMVSGEKMSKSLGNFVTIRELLQKYSPEVIRFFVLQKHYRSPLDY 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
+ ++ A + +Y TL + A+ D A D + ++ + F +M DD
Sbjct: 305 TEEGIQHAKNNLERLYNTLENIRVAMEKADVAFRWDEEEFELYETVREARKKFYDAMDDD 364
Query: 438 LHTTVVLAALSDPLKTINDLL-HTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
+T L A+ + +N L K K+ +R ALE + V V GL + E
Sbjct: 365 FNTAEALKAVFEVSNAVNRYLTKVEKPKESVLR----KALE-FFKIVSEVFGLFEDYFKE 419
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
+KA L E V R E RK + + +D IR +L A+GI L D+P GT
Sbjct: 420 ------QKAGDEEALIELLVSVRAE----LRKQRNFTLADKIRDELKALGIQLEDTPQGT 469
Query: 557 TWR 559
W+
Sbjct: 470 IWK 472
>gi|392959715|ref|ZP_10325196.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
gi|421056356|ref|ZP_15519274.1| cysteinyl-tRNA synthetase [Pelosinus fermentans B4]
gi|421070069|ref|ZP_15531206.1| cysteinyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392438194|gb|EIW16052.1| cysteinyl-tRNA synthetase [Pelosinus fermentans B4]
gi|392448807|gb|EIW25984.1| cysteinyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392456099|gb|EIW32858.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
Length = 481
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/486 (45%), Positives = 302/486 (62%), Gaps = 11/486 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNTM+R++E P GKV MYVCGVTPY+ HIG+AR ++T+DV+ RYL H YEV
Sbjct: 3 LKVYNTMTRQKEEFIPHEAGKVKMYVCGVTPYNHPHIGNARPFITWDVIKRYLEHCRYEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTDVDDKII AN G ++ RY + + M L+ + P VSDHM I
Sbjct: 63 FHVQNFTDVDDKIIKAANTEGVTWDVIANRYIASYFEVMDKLNIRRADIYPTVSDHMTEI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I+++ ++ G+AY VDGDVY+SV+KF +YG+LSGR +ED +AG RV VD RK +P DFA
Sbjct: 123 INIVEGLVAKGYAYIVDGDVYYSVEKFNDYGKLSGRDIEDMKAGARVDVDERKHHPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWKSAK GEP WESPWG GRPGWHIEC+AMS YLG+SFD HGGG DL+FPHHENEIAQS
Sbjct: 183 LWKSAKPGEPAWESPWGKGRPGWHIECTAMSLKYLGNSFDFHGGGSDLIFPHHENEIAQS 242
Query: 316 CAACNNSH--ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
A S + YW+HNGF+T++ EKMSKSLGNFF ++ ++E Y P LR F++ THYRS
Sbjct: 243 EAFVEESQPFVRYWLHNGFITVNEEKMSKSLGNFFLVKDILEHYSPEVLRFFVLSTHYRS 302
Query: 374 PINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
P+++S +L A + + + + + + DAA ++ + V + DF +
Sbjct: 303 PLDFSDERLSEAQRSLERLRTAVENVLQLGKMPDAA--NENKADELVKVARQAEEDFCKA 360
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T + ++ + K IN + K + AL +T + ++G+
Sbjct: 361 MDDDFNTALAISVMFGLAKEINVYYNGVIAGKVQHTAKGYTALRETYFMMANIIGIF--- 417
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ + K +L E + IE R AR+NK++ +D +R L AVGI L DSP
Sbjct: 418 ----VQEQTGKVDDSQELVEQLMDIIIEIRQHARQNKDWATADKVRDSLGAVGIVLEDSP 473
Query: 554 VGTTWR 559
G W+
Sbjct: 474 QGVRWK 479
>gi|242280816|ref|YP_002992945.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
gi|259511828|sp|C6BS23.1|SYC_DESAD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|242123710|gb|ACS81406.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
Length = 485
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/482 (43%), Positives = 298/482 (61%), Gaps = 3/482 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++RK+E P KV +Y CG+T YDL HIGHAR V FD+L RYLR GY+V +
Sbjct: 3 LYNTLNRKKEEFVPLNGNKVNLYACGITAYDLCHIGHARSSVVFDILVRYLRFKGYDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTD+DDKII RANE G L+ ++ EF+ DM L+ L +EP+ ++H+P +I+
Sbjct: 63 VRNFTDIDDKIINRANETGVTSTELAEKFIGEFYVDMDKLNILRADIEPKCTEHIPEMIE 122
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ +++ AY GDVYF V F +YG+LSGR +ED ++G R+ K++P DFAL
Sbjct: 123 LTQTLIEKDHAYATPSGDVYFKVRSFDDYGKLSGRNIEDLQSGARIQPGEEKQDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWH+ECSAMS Y FDIHGGG DL FPHHENEIAQS
Sbjct: 183 WKAAKPGEPSWESPWGQGRPGWHLECSAMSEKYFELPFDIHGGGQDLSFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA +W+HNGFV I+SEKMSKSLGNFFTIR +++ + P LR FL+ HYRSP++
Sbjct: 243 AATGKEMARFWVHNGFVQINSEKMSKSLGNFFTIRDILDKFMPETLRYFLLTMHYRSPLD 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
+S LE A + I +Y L +AL+ + K ++P + + I + +M D
Sbjct: 303 FSFEALEEAEKGIRRVYSALEQTAEALN--KSKWSKAALPEEVLAEIEDAEKGWADAMED 360
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D++T + + ++ + + +K ++ + + ++ VLG+ + E
Sbjct: 361 DMNTAGAMGHMFTLIRLAGRIGEEKSWRKSEGGRDAWIRILEDMKKWGEVLGIFTRDPKE 420
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L +L+ L+R + +V + + R ARKNK++ +SD IR +L +G+ + D+P G
Sbjct: 421 FLEELKLCMLERKGIEVAKVEELVAARQEARKNKDFARSDEIRDELIELGVEVKDTPQGA 480
Query: 557 TW 558
W
Sbjct: 481 VW 482
>gi|352101164|ref|ZP_08958587.1| cysteinyl-tRNA synthetase [Halomonas sp. HAL1]
gi|350600648|gb|EHA16709.1| cysteinyl-tRNA synthetase [Halomonas sp. HAL1]
Length = 468
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/486 (45%), Positives = 301/486 (61%), Gaps = 26/486 (5%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
+ + +YNT++R++E P V GKV MYVCG+T YD H+GHARV V FDV+ RYLR GY
Sbjct: 3 SHMHIYNTLTRRKEPFTPLVAGKVSMYVCGMTVYDYCHLGHARVMVAFDVITRYLRERGY 62
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
+V YVRN TD+DDKI+ RA+E GE +L+ R H+D L LPP+ EPR + H+
Sbjct: 63 DVNYVRNITDIDDKILKRADENGESITALTERMIAAMHEDEARLFVLPPTHEPRATGHID 122
Query: 194 HIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
I+ MI ++ GFAY D GDVY+ V KF YG+L+ R+L+D R+G RV VD K++P
Sbjct: 123 DIVAMIETLIAKGFAYAADNGDVYYRVRKFANYGKLNNRQLDDMRSGARVDVDVHKEDPL 182
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DF LWK+AK GE W SPWG GRPGWHIECSAMS LG +FDIHGGG DL FPHHENEI
Sbjct: 183 DFVLWKAAKPGEAHWSSPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEI 242
Query: 313 AQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
AQS AA ++++ W+H G V ++ EKMSKSLGNFFTIR V+ + P +R L+ +HYR
Sbjct: 243 AQSEAATGKTYVNTWMHAGAVRVNKEKMSKSLGNFFTIRDVLAEHDPEVVRFLLVASHYR 302
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
SPINYSV L A + + +Y L + DA A ++ P + F
Sbjct: 303 SPINYSVDSLTEARKSLTRLYTALEGVDT-----DAIASSEASP---------YRERFTQ 348
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
M DD +T LA + + + +N R ++Q + A L ++ + +LGL+
Sbjct: 349 VMDDDFNTPEALAVMFELAREVN-----RAKQEQP---DEAARLGGELKQLGAILGLLQQ 400
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
L +++ + L+E ++ +I R A+ NK++ ++DAIR +L+A+GI L DS
Sbjct: 401 APQIFLKGTQQQGMP---LSESEIEAKIAQRIEAKANKDFAQADAIRDELSALGIILKDS 457
Query: 553 PVGTTW 558
GT+W
Sbjct: 458 REGTSW 463
>gi|431929783|ref|YP_007242829.1| cysteinyl-tRNA synthetase [Thioflavicoccus mobilis 8321]
gi|431828086|gb|AGA89199.1| cysteinyl-tRNA synthetase [Thioflavicoccus mobilis 8321]
Length = 465
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/487 (45%), Positives = 293/487 (60%), Gaps = 28/487 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++ + P V G+V MYVCG+T YD H+GHARV V FDV+YRYLRHLGYEV
Sbjct: 2 LQIYNSLTRQKAVFTPLVPGQVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRHLGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y+RN TD+DDKII RA E E +L+ R+ H+D L LPPS EPR + H+ I
Sbjct: 62 TYIRNITDIDDKIIRRAGENDEPIAALTERFIAAMHEDAAALGVLPPSDEPRATAHIDEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
M+ +L+ G AYR D GDVY++V +FP YG+LSG+ ++ RAG RV + K++P DF
Sbjct: 122 QAMVATLLERGLAYRADNGDVYYAVGRFPGYGKLSGKDPQELRAGSRVEIGEAKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWGPGRPGWHIECSAMS LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGPGRPGWHIECSAMSTCALGAHFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + W+HNGFV ++ EKMSKSLGNFFT+R+++ Y P +R F++ +HYRSP
Sbjct: 242 SEGATGEPFVEVWMHNGFVRVNDEKMSKSLGNFFTVREILARYRPEEVRYFILTSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY L+ A + Y L +PP F F A+M
Sbjct: 302 LNYDEDHLQQARGALTRFYTALR----------------GLPPAEPAGGEAFSERFHAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD T LA L + ++ IN + + + A+ E +R + VLG++ G
Sbjct: 346 DDDFATPEALAVLFELVREINRVRADDEARAAALGAE--------LRRLGAVLGILQ-GD 396
Query: 495 SEVLLQLREKALKRA--DLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
E L+ + L + + IE RT AR+ +++ ++D +R L GI L D
Sbjct: 397 PEAYLRGEGLVVDAGPAALDDAAIDALIERRTAARQARQWAEADRLRDQLQEAGILLEDG 456
Query: 553 PVGTTWR 559
P GTTWR
Sbjct: 457 PQGTTWR 463
>gi|319790489|ref|YP_004152122.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
gi|317114991|gb|ADU97481.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
Length = 472
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/483 (46%), Positives = 297/483 (61%), Gaps = 21/483 (4%)
Query: 80 NTMSRKRELVKPKVEGK-VGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYV 138
NT++ ++E KP +EGK V MYVCG T YD +HIGHAR V FDV+ R+L + GY V +V
Sbjct: 6 NTLTERKEEFKP-LEGKTVKMYVCGPTVYDHAHIGHARSAVVFDVIRRWLEYRGYRVIFV 64
Query: 139 RNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDM 198
RN+TDVDDKII R+ E G +S++Y + +DM L+ P+ +P+V++H+ II+M
Sbjct: 65 RNYTDVDDKIIKRSKEEGIPWYEVSKKYIASYEEDMEALNVKEPTYKPKVTEHIREIIEM 124
Query: 199 ITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWK 258
I ++ G AY DGDVYFSV+ FPEYG+LS RK E+ AG RV +KKNP DFALWK
Sbjct: 125 IDGLIQKGHAYEADGDVYFSVESFPEYGKLSKRKTEELLAGARVEPGEKKKNPLDFALWK 184
Query: 259 SAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAA 318
+KEGEP WESPWG GRPGWHIECSAMS YLG + DIHGGG DL+FPHHENEIAQS +
Sbjct: 185 KSKEGEPGWESPWGVGRPGWHIECSAMSMKYLGETIDIHGGGFDLIFPHHENEIAQSESY 244
Query: 319 CNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYS 378
+ YWIHNGFV ++ EKMSKSLGNFFTI+++++ + P LRLFL+ THYRSPI+++
Sbjct: 245 TGKTFARYWIHNGFVMVNREKMSKSLGNFFTIKEILKQFSPDTLRLFLLSTHYRSPIDFT 304
Query: 379 VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDDL 438
V +L+ A ER T + KA+ L K P D ++ +F A+M DD
Sbjct: 305 VERLKEA-ERALKRLTTFIESVKAVEKLPEEGEKGE-PIDVESA----RREFEAAMDDDF 358
Query: 439 HTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
+T L AL + +K N L ++ K ESL + N L LG
Sbjct: 359 NTAKALGALYELVKRANTLKDKALKRQKITPSERESLVDAARFTENALKTLGFKL----- 413
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
E+ L E + I+ R RK KE++ +D IR L +GI L D P GT
Sbjct: 414 ------EREQSEGGLEEALIELLIQVRGELRKKKEFQLADLIRDRLKELGITLEDLPTGT 467
Query: 557 TWR 559
+R
Sbjct: 468 VYR 470
>gi|303327042|ref|ZP_07357484.1| cysteine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
gi|345890980|ref|ZP_08841841.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. 6_1_46AFAA]
gi|302863030|gb|EFL85962.1| cysteine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
gi|345048705|gb|EGW52528.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. 6_1_46AFAA]
Length = 483
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/482 (45%), Positives = 295/482 (61%), Gaps = 5/482 (1%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+ R++E P GKV MYVCG+T YD HIGHAR + FD L R+LRHLG EV +
Sbjct: 3 IYNTLGRQKEEFIPVRPGKVHMYVCGITAYDYCHIGHARSALVFDALVRHLRHLGLEVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTDVDDKII RAN+ G D +++ Y + FH+DM L L +EPR ++++P I +
Sbjct: 63 VRNFTDVDDKIINRANKEGRDWQEVAQTYIDAFHEDMDRLGVLRADLEPRATEYIPQIQE 122
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ +++ G AY GDVYF V +P YG+LSGR L++ +G RVA K++P DFAL
Sbjct: 123 LCAKLIAEGTAYATPSGDVYFRVRSYPPYGKLSGRSLDELLSGARVAPGEEKEDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP W+SPWG GRPGWHIECSAMS+ YL DIHGGG DLVFPHHENEIAQS
Sbjct: 183 WKAAKPGEPSWDSPWGKGRPGWHIECSAMSSPYL--PLDIHGGGQDLVFPHHENEIAQSE 240
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A C YW+HNGFV +++EKMSKSLGNF TIR ++ Y P LR FL+G HYRSPI+
Sbjct: 241 AVCRCELARYWVHNGFVQVNAEKMSKSLGNFKTIRDILGSYLPETLRFFLLGKHYRSPID 300
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
++ ++ A + +Y +L + KAL A+ K +P + F A++ D
Sbjct: 301 FTAEGMDEAEKAQHRVYSSLMEARKALE--RASWKKTPLPAELSAEWAALPQAFEAALDD 358
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
DL+T L + ++ +N LL + + + L R+ LGL E
Sbjct: 359 DLNTAQALGQIFSQVRIVNRLLEEKNLRAAESTRDLLEDFLARARDWDAQLGLFGRDPVE 418
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L +LR R +L D+V + R R K++ +SDA+R++L +G+ + D+P G
Sbjct: 419 FLTELRAMRAARKNLDMDRVEDLLRQRREVRMQKDFTRSDALRRELLDLGVNVRDTPEGQ 478
Query: 557 TW 558
W
Sbjct: 479 AW 480
>gi|220917782|ref|YP_002493086.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
gi|254765172|sp|B8JDH1.1|SYC_ANAD2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219955636|gb|ACL66020.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 481
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/483 (49%), Positives = 307/483 (63%), Gaps = 20/483 (4%)
Query: 83 SRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNFT 142
++KRELV P GK+ +YVCG T YD SH+GHAR YV +DV+ R+LR G EV +VRNFT
Sbjct: 11 AQKRELV-PLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRARGLEVRFVRNFT 69
Query: 143 DVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQI 202
DVDDKII RANE GEDPI+L+ R+ + FH+DM L L P VEPRVS H+P I+ +I ++
Sbjct: 70 DVDDKIIQRANERGEDPIALASRFADAFHEDMDALGNLRPDVEPRVSGHIPEIVALIARL 129
Query: 203 LDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAK 261
++ GFAY +GDVY++V KFPEYG+LS R L+D AG RV K++P DFALWK+AK
Sbjct: 130 VERGFAYAPGNGDVYYAVRKFPEYGRLSKRNLDDLIAGARVEPGEAKRDPLDFALWKAAK 189
Query: 262 EGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNN 321
GEP WESPWG GRPGWHIECSAM+ +LG D+H GG DLVFPHH NEIAQS AA ++
Sbjct: 190 PGEPAWESPWGKGRPGWHIECSAMTQKHLGAPIDLHAGGKDLVFPHHTNEIAQSVAATSD 249
Query: 322 S-----HISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
YW+HNGFV ID EKMSKSLGNFFTIR V+ + ALR FL+GTHYR N
Sbjct: 250 GLHAEDFARYWMHNGFVQIDDEKMSKSLGNFFTIRDVLARFDGEALRFFLLGTHYRRDFN 309
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
+S L A R+ +Y+T+ E+ + + F A++ D
Sbjct: 310 FSDQVLAEAERRLSALYETVEKAERLGAGA------------APAAEPAFVERARAALDD 357
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T VL +++ N L RKGKK + LAA + R V VLG++ ++
Sbjct: 358 DFNTPQVLGIVAEAFTEAN-ALADRKGKKSSEEKARLAAFARGARAVGAVLGILDRPPAQ 416
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L +R++A R + +V + I +R AR K++ +SDAIR L A G+ LMD P GT
Sbjct: 417 ALTAIRDRAAARRGIDGGEVERSIAERAAARAAKDFARSDAIRDALLARGVVLMDGPQGT 476
Query: 557 TWR 559
TW+
Sbjct: 477 TWK 479
>gi|147676630|ref|YP_001210845.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
gi|187629838|sp|A5D5M0.1|SYC_PELTS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146272727|dbj|BAF58476.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
Length = 484
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/482 (45%), Positives = 296/482 (61%), Gaps = 3/482 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E +P+ G+V MYVCG T Y+ H+G+AR V FD + RYL H GYEV +
Sbjct: 3 IYNTLTRRKENFQPREPGRVCMYVCGPTTYNYIHLGNARPLVFFDTVRRYLIHKGYEVLF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII RA E G+DP++L+RRY E+ +D L+ P VS+H+P II
Sbjct: 63 VQNFTDVDDKIINRAQEEGDDPLALARRYIGEYFKDADALNVRRADRHPLVSEHIPDIIK 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
M+ +++ G AY VDG+VYF V KF YG+LSGR LED +AG RV VD RK++P DFALW
Sbjct: 123 MVDELVKKGAAYVVDGNVYFEVRKFAGYGKLSGRTLEDMQAGARVEVDPRKRDPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK GEP W+SPWGPGRPGWHIECSAMS YLG +FDIHGGG DL+FPHHENEIAQS A
Sbjct: 183 KAAKPGEPCWDSPWGPGRPGWHIECSAMSLKYLGTNFDIHGGGYDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A + YW+HNGF+T++ EKMSKSLGNFF +R ++ + P +R FL+ THYRSP+++
Sbjct: 243 ATGQPFVRYWMHNGFITVNEEKMSKSLGNFFLVRDILAKFPPELVRFFLLSTHYRSPLDF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
++ +A + I +L +AL + ++ D I F A+M DD
Sbjct: 303 DGEKMAAAGRGLERIKTSLRLLYEALERPVSEGVQAVCSRDPFDEIRA---SFEAAMDDD 359
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T + + A+ D + N + + L VLG+ +
Sbjct: 360 FNTALAIGAVFDLAREANTAVQRTGPAVSGQDRQILQYALDLFNEFNEVLGIFKVDGASG 419
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
L + A + L E + +E R ARK K++ +D IR L +GI L D+P G
Sbjct: 420 RLLIDGAAGDDSGLVEGLINLILEVRQEARKRKDWSTADRIRDGLKELGILLEDTPQGVR 479
Query: 558 WR 559
W+
Sbjct: 480 WK 481
>gi|153000119|ref|YP_001365800.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
gi|373948991|ref|ZP_09608952.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
gi|386325170|ref|YP_006021287.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
gi|187631634|sp|A6WLP8.1|SYC_SHEB8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|151364737|gb|ABS07737.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
gi|333819315|gb|AEG11981.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
gi|373885591|gb|EHQ14483.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
Length = 459
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 299/488 (61%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R+++ KP GK+GMYVCGVT YDL HIGH R +V+FD++ RYLR+ GYEV
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TDVDDKII RANE E +L+ R E HQD L+ L P EPR + H+ I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ +L G AY DGDV FSV +P+YG+LSG+ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y + D + L++ A A +F F A+M
Sbjct: 302 LNYSEDNLKQARSALERLYTAIKDVD--LTVAAAPA-------------EEFVAKFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ IN L T + +AL T++ + VLGL+S
Sbjct: 347 DDDFNTPEAYSVLFDMVREINRLKLT--------DMAQASALAVTLKQLADVLGLLSQ-- 396
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+A + ++D+V + I +R AR K++ +D R L +G+ L D
Sbjct: 397 -------EPEAFFQGGGSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVELED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPSGTTWR 457
>gi|421076448|ref|ZP_15537435.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans JBW45]
gi|392525459|gb|EIW48598.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans JBW45]
Length = 481
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/486 (45%), Positives = 301/486 (61%), Gaps = 11/486 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNTM+R++E P GKV MYVCGVTPY+ HIG+AR ++T+DV+ RYL H YEV
Sbjct: 3 LKVYNTMTRQKEEFIPHEAGKVKMYVCGVTPYNHPHIGNARPFITWDVIKRYLEHCRYEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTDVDDKII AN G ++ RY + + M L+ + P VSDHM I
Sbjct: 63 FHVQNFTDVDDKIIKAANNEGVTWDVIANRYIASYFEVMDKLNIRRADIYPTVSDHMTEI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I+++ ++ G+AY VDGDV++SV+KF +YG+LSGR +ED +AG RV VD RK +P DFA
Sbjct: 123 INIVEGLVAKGYAYIVDGDVFYSVEKFNDYGKLSGRDIEDMKAGARVDVDERKHHPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWKSAK GEP WESPWG GRPGWHIEC+AMS YLG+SFD HGGG DL+FPHHENEIAQS
Sbjct: 183 LWKSAKPGEPAWESPWGKGRPGWHIECTAMSLKYLGNSFDFHGGGSDLIFPHHENEIAQS 242
Query: 316 CAACNNSH--ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
A + YW+HNGF+T++ EKMSKSLGNFF ++ ++E Y P LR F++ THYRS
Sbjct: 243 EAFVEEGQPFVRYWLHNGFITVNEEKMSKSLGNFFLVKDILEHYSPEVLRFFVLSTHYRS 302
Query: 374 PINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
P+++S +L A + + + + + L DAA ++ + V + DF +
Sbjct: 303 PLDFSDERLSEAQRSLERLRTAVENVLQLEKLPDAA--NENKADELVKVAKQAEEDFCKA 360
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T + ++ + K IN + K E AL +T + ++G+
Sbjct: 361 MDDDFNTALAISVMFGLAKEINVYYNGVIAGKVQHTTEGYIALRQTYFMMANIIGIF--- 417
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ + K +L E + IE R AR+NK++ +D +R L AVGI L DSP
Sbjct: 418 ----VQEQTGKVDDSQELVEQLMDIIIEIRQHARQNKDWTVADKVRDSLGAVGIILEDSP 473
Query: 554 VGTTWR 559
G W+
Sbjct: 474 QGVRWK 479
>gi|423073155|ref|ZP_17061898.1| cysteine--tRNA ligase [Desulfitobacterium hafniense DP7]
gi|361855985|gb|EHL07919.1| cysteine--tRNA ligase [Desulfitobacterium hafniense DP7]
Length = 477
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 303/485 (62%), Gaps = 15/485 (3%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NTMS ++E KP+ EGKVGMY CG T Y+ H+G+ R+ V FD++ RYL + GY+V
Sbjct: 3 LRLFNTMSHQKEEFKPREEGKVGMYTCGPTVYNYFHVGNGRMLVVFDMIRRYLLYKGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTD+DDKII R E G DP+ L++ Y E+ +D L+ +P S+ P+ +DH+P +
Sbjct: 63 TFVQNFTDIDDKIIKRGQEEGRDPLELAQDYIGEYFKDAAALNLMPASIHPKATDHIPEM 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I++I + + G AY VDGDVYF+VDK P YG+LSGR LED +AG RV V RK+NP DFA
Sbjct: 123 IEIIKGLEEQGLAYAVDGDVYFAVDKLPAYGKLSGRTLEDMQAGARVEVGERKQNPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+AK GEPFWESPWG GRPGWHIECSAMS YLG FDIHGGG DLVFPHHENEIAQ+
Sbjct: 183 LWKNAKPGEPFWESPWGKGRPGWHIECSAMSLKYLGSGFDIHGGGGDLVFPHHENEIAQA 242
Query: 316 CAACNNSHIS-YWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
+ + YW+HN F+TI+ +KMSKSLGNFFT+R+++E + +R +L+GTHYRSP
Sbjct: 243 EGYLHGETFARYWMHNAFLTINQQKMSKSLGNFFTVREILEYFPGEVIRFYLLGTHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+++ L A + + + ++ ++AL + + + + +F +M
Sbjct: 303 LDFDDENLRMAQKGLERLQTSIRLADEALGRQGQNSADAAPEQKLRAAAEEARREFEEAM 362
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ + A+ + K IN H + + E L T+ + VLG
Sbjct: 363 DDDFNSALAYASFFELGKAIN--AHVQAYPYSS---EGLLKARATLWELADVLGFD---- 413
Query: 495 SEVLLQLREKALKRADLTEDQVLQ-RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L + + DQV++ +E R +ARK K++E SD IR L +GI L D+P
Sbjct: 414 ----LAKPANQAEAGNQKLDQVMELLLEVRAIARKKKDWEMSDLIRDRLKDLGIVLEDTP 469
Query: 554 VGTTW 558
G W
Sbjct: 470 QGARW 474
>gi|344340320|ref|ZP_08771246.1| cysteinyl-tRNA synthetase [Thiocapsa marina 5811]
gi|343799978|gb|EGV17926.1| cysteinyl-tRNA synthetase [Thiocapsa marina 5811]
Length = 466
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/487 (45%), Positives = 301/487 (61%), Gaps = 28/487 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++N+++R++E +P KV MYVCG+T YD H+GHARV V FDV+YRYLR LGYEV
Sbjct: 2 LQIHNSLTRRKEPFEPIEPRKVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRALGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y+RN TD+DDKII RA E GE +L+ R+ + H+D L LPP+ EPR + HM I
Sbjct: 62 TYIRNITDIDDKIIRRAAEAGESMQALTDRFIQAMHEDSDALGILPPTDEPRATAHMDEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI +++ G AY + GDVY++V +F YG+LSG+ +D RAG RV VD K++P DF
Sbjct: 122 LAMIGTLIEKGLAYVAENGDVYYAVARFAGYGKLSGKDPQDLRAGARVEVDEAKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWKSAK GEP W+SPWGPGRPGWHIECSAMS LGH FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKSAKPGEPAWDSPWGPGRPGWHIECSAMSTCALGHHFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + ++ W+HNGFV ++ EKMSKSLGNFFT+R++++ + P +R F++ + YRSP
Sbjct: 242 SEGATGETFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQRFRPEEVRYFILTSQYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTS--INKFHNDFLA 432
+NY LE A + +Y L + PD V + F F A
Sbjct: 302 LNYDDEHLEQARAALTRLYTALRGVP-------------DVAPDAVDASVAAPFVERFHA 348
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T LA L D ++ +N + +A + A +R + +LG++
Sbjct: 349 AMDDDFNTPEALAVLFDLVREVN--------RIRADDPGAAAGPAAVLRRLGGILGILQ- 399
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L LR +A L++ ++ ++ R AR K++ ++D +RK L GI L D
Sbjct: 400 --EDPDLYLRGRA-DDGGLSDTEIESLVQARIAARAAKDWAEADRLRKLLTEAGIGLEDG 456
Query: 553 PVGTTWR 559
P GT WR
Sbjct: 457 PSGTAWR 463
>gi|160874741|ref|YP_001554057.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
gi|378707994|ref|YP_005272888.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
gi|418023622|ref|ZP_12662607.1| cysteinyl-tRNA synthetase [Shewanella baltica OS625]
gi|187631635|sp|A9KWH4.1|SYC_SHEB9 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160860263|gb|ABX48797.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
gi|315266983|gb|ADT93836.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
gi|353537505|gb|EHC07062.1| cysteinyl-tRNA synthetase [Shewanella baltica OS625]
Length = 459
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 299/488 (61%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R+++ KP GK+GMYVCGVT YDL HIGH R +V+FD++ RYLR+ GYEV
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TDVDDKII RANE E +L+ R E HQD L+ L P EPR + H+ I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ +L G AY DGDV FSV +P+YG+LSG+ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y + D + L++ A A +F F A+M
Sbjct: 302 LNYSEDNLKQARSALERLYTAIKDVD--LTVAAAPA-------------EEFIAKFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ IN L T + +AL T++ + VLGL+S
Sbjct: 347 DDDFNTPEAYSVLFDMVREINRLKLT--------DMAQASALAVTLKQLADVLGLLSQ-- 396
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+A + ++D+V + I +R AR K++ +D R L +G+ L D
Sbjct: 397 -------EPEAFFQGGGSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVELED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPSGTTWR 457
>gi|410635575|ref|ZP_11346184.1| cysteinyl-tRNA synthetase [Glaciecola lipolytica E3]
gi|410144873|dbj|GAC13389.1| cysteinyl-tRNA synthetase [Glaciecola lipolytica E3]
Length = 458
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/491 (45%), Positives = 296/491 (60%), Gaps = 47/491 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E KP V GKVG+YVCG+T YD+ H+GHAR Y++FD++ RYLRH G++V Y
Sbjct: 4 IYNTLTRQKETFKPLVAGKVGLYVCGITVYDVCHMGHARTYLSFDLMVRYLRHKGFDVNY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TDVDDKII RAN+ GE L++R H+D ++ L P +EPRV+ H+P IID
Sbjct: 64 VRNITDVDDKIIQRANQNGETAEQLTQRTIALMHEDFAAINLLEPDIEPRVTTHIPEIID 123
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+I +++ G AY+ GDV F V + +YG+LS + LE AGERV V S K +P DF L
Sbjct: 124 VIQRLISKGHAYQAPSGDVLFDVSTYDQYGKLSKQDLEQLNAGERVEVSSDKTDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+ K GEP+WESPWG GRPGWHIECSAM++ +LG FDIHGGG DL+FPHHENE+AQSC
Sbjct: 184 WKTVKPGEPYWESPWGEGRPGWHIECSAMNSKHLGTHFDIHGGGSDLIFPHHENEVAQSC 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +++YWIH G V +D EKMSKSLGNFFT+R V++ Y LR FL+ HYRS ++
Sbjct: 244 CAFDTPYVNYWIHTGMVQVDQEKMSKSLGNFFTLRDVLKDYDAETLRYFLMSAHYRSQLS 303
Query: 377 YS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPP-DTVTSINKFHNDFLA 432
YS + Q +SA ER++ AL+DS P D + F +
Sbjct: 304 YSEENIKQAKSALERLY------------------TALRDSQPNFDVDMQQGDYLQRFES 345
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T A + D +K IN K LA + L+
Sbjct: 346 AMDDDFNTPEAFAVMFDLVKDIN--------KSHGQEKSDLAGI------------LLKL 385
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIA 548
G LQL A + + E + IE R AR +K++ +DA R L A+G+
Sbjct: 386 GAILGFLQLDPNAYLQGGIVESDEVSVIEGLIKARNDARADKDWIAADAARDALTAMGVV 445
Query: 549 LMDSPVGTTWR 559
L D GTTWR
Sbjct: 446 LEDGANGTTWR 456
>gi|338813808|ref|ZP_08625892.1| cysteinyl-tRNA synthetase [Acetonema longum DSM 6540]
gi|337274202|gb|EGO62755.1| cysteinyl-tRNA synthetase [Acetonema longum DSM 6540]
Length = 480
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/487 (45%), Positives = 303/487 (62%), Gaps = 14/487 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++K+ P GKV MYVCGVTPY+ HIG+AR +VT+DV+ RY HLGY+V
Sbjct: 3 LKVYNTLTKKKGKFVPSEPGKVKMYVCGVTPYNHPHIGNARPFVTWDVIRRYFEHLGYQV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTDVDDKII AN ++ RY + + M L +V PRVS+HMP I
Sbjct: 63 YHVQNFTDVDDKIINAANAEQVSWDVIANRYIASYFEVMDPLRIRRATVYPRVSEHMPQI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
IDM+ +++ G+AY DGDVY+SV+KF +YG+LSGR L+D +AG RV VD RK++P DFA
Sbjct: 123 IDMVQTLINKGYAYLADGDVYYSVEKFHDYGKLSGRSLDDMKAGARVEVDERKRHPMDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWKS K GEP W+SPWGPGRPGWHIECSAMS YLG SFD HGGG DL+FPHHENEIAQS
Sbjct: 183 LWKSVKPGEPSWDSPWGPGRPGWHIECSAMSFHYLGKSFDFHGGGSDLIFPHHENEIAQS 242
Query: 316 CA--ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
A C + YW+HNGF+T++ EKMSKSLGNFF ++ ++ + P LR F++ THYRS
Sbjct: 243 EAFCGCEEPCVHYWLHNGFITVNEEKMSKSLGNFFLVKDILTHFSPEVLRFFIVSTHYRS 302
Query: 374 PINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVT-SINKFHNDFLA 432
P+++S +L A R +T + K L+ L A A + T+T + + +F
Sbjct: 303 PLDFSDERLAEAG-RSLERLKTAQENLKYLATLPAGAASEG--SHTLTEAAQRAKTEFYE 359
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T +V + + K IN H + L++ E+ ++ + LG
Sbjct: 360 AMDDDFNTALVTSVMFGLAKEINIYHHEVVNGRVGSDLQACKEAEQALKVMADTLG---- 415
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
VL + ++ + +L E + I R AR+ K++ +D IR L GI L DS
Sbjct: 416 ----VLQENSARSDENQELVEQLMQLIITIRQEARQKKDWATADQIRDRLHDAGIVLEDS 471
Query: 553 PVGTTWR 559
P G W+
Sbjct: 472 PQGARWK 478
>gi|165976334|ref|YP_001651927.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|307261399|ref|ZP_07543074.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|229558613|sp|B0BPJ8.1|SYC_ACTPJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|165876435|gb|ABY69483.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|306869130|gb|EFN00932.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 459
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/492 (46%), Positives = 294/492 (59%), Gaps = 40/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR+LGY +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E H+D DL+ L P VEPR + H+P I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ +++ NG AY DGDV F V+ F +YG LS + LE +AG RV + S KKNP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YW+H G +TID EKMSKSLGNFFTIR ++E Y LR F + HYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS+ L+ A + +Y +L C+ ++ V ++ F A+M
Sbjct: 302 LNYSLNNLDLARSALERLYTSLRGCDLSVE---------------VAGGEQYVEAFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T LA L + + +N L K A+RL+ LA VLGL+
Sbjct: 347 DDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAG----------VLGLLYQ 396
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
E LQ D D+V + I+ R A+ K + +D +R L A+ I L
Sbjct: 397 D-PEAFLQ--------GDADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVL 447
Query: 550 MDSPVGTTWRPA 561
D+P GTTWR A
Sbjct: 448 EDTPNGTTWRKA 459
>gi|303253060|ref|ZP_07339211.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307247903|ref|ZP_07529938.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|302648092|gb|EFL78297.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|306855594|gb|EFM87762.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
Length = 459
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/492 (46%), Positives = 294/492 (59%), Gaps = 40/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR+LGY +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E H+D DL+ L P VEPR + H+P I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ +++ NG AY DGDV F V+ F +YG LS + LE +AG RV + S KKNP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YW+H G +TID EKMSKSLGNFFTIR ++E Y LR F + HYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS+ L+ A + +Y +L C+ ++ V ++ F A+M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSVE---------------VAGGEQYVEAFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T LA L + + +N L K A+RL+ LA VLGL+
Sbjct: 347 DDDFNTPGALAVLFEVAREVNKLKTEDMAKANGLAVRLKELAG----------VLGLLYQ 396
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
E LQ D D+V + I+ R A+ K + +D +R L A+ I L
Sbjct: 397 D-PEAFLQ--------GDADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVL 447
Query: 550 MDSPVGTTWRPA 561
D+P GTTWR A
Sbjct: 448 EDTPNGTTWRKA 459
>gi|410645940|ref|ZP_11356395.1| cysteinyl-tRNA synthetase [Glaciecola agarilytica NO2]
gi|410134539|dbj|GAC04794.1| cysteinyl-tRNA synthetase [Glaciecola agarilytica NO2]
Length = 464
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/489 (46%), Positives = 301/489 (61%), Gaps = 33/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++EL P E KVG+YVCG+T YDLSH+GHAR Y++FD++ RYLRH GYEV
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H D ++ L P +EPRV+ HMP I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTRALTERTIAMMHDDFAAINLLEPDIEPRVTTHMPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I +I +++ G AY+ GDV F V + +YG+LS + LE G RV VDS K +P DF
Sbjct: 122 IAIIERLIQRGHAYQAKSGDVLFDVSSYSDYGKLSKQDLEQLNIGSRVDVDSGKDDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+ K GEP W SPWG GRPGWHIECSAM+ +LG FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKTVKPGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +DSEKMSKSLGNFFT+R V++ + LR FL+ HYRS
Sbjct: 242 SCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLKQHDAETLRYFLMSAHYRSQ 301
Query: 375 INYS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
++YS + Q SA ER++ AL ++A D D + +K
Sbjct: 302 LSYSEDNITQARSALERLY----------TALRDVNANIQVDMQSDDYLARFDK------ 345
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAA-LEKTIRNVLTVLGLM 490
+M DD +T +A L D K +N K K + +S A+ L + N+ VLG++
Sbjct: 346 -AMDDDFNTPEAMAVLFDVAKELN------KAKAEDQSGQSRASDLAGILLNLGKVLGIL 398
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
SE L ++ A + A ++ I+ R AR K++ +DA R L A+ I L
Sbjct: 399 QRSPSEYLQGDQQDADEVA-----EIEALIKARNDARAAKDWPAADAARDGLNALNIILE 453
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 454 DGPSGTTWR 462
>gi|410641387|ref|ZP_11351907.1| cysteinyl-tRNA synthetase [Glaciecola chathamensis S18K6]
gi|410138920|dbj|GAC10094.1| cysteinyl-tRNA synthetase [Glaciecola chathamensis S18K6]
Length = 464
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/489 (46%), Positives = 301/489 (61%), Gaps = 33/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++EL P E KVG+YVCG+T YDLSH+GHAR Y++FD++ RYLRH GYEV
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLIVRYLRHKGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H D ++ L P +EPRV+ HMP I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTRALTERTIAMMHDDFAAINLLEPDIEPRVTTHMPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I +I +++ G AY+ GDV F V + +YG+LS + LE G RV VDS K +P DF
Sbjct: 122 IAIIERLIQRGHAYQAKSGDVLFDVSSYSDYGKLSKQDLEQLNMGSRVDVDSDKDDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+ K GEP W SPWG GRPGWHIECSAM+ +LG FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKTVKPGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +DSEKMSKSLGNFFT+R V++ + LR FL+ HYRS
Sbjct: 242 SCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLKQHDAETLRYFLMSAHYRSQ 301
Query: 375 INYS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
++YS + Q SA ER++ AL ++A D D + +K
Sbjct: 302 LSYSEDNITQARSALERLY----------TALRDVNANIQVDMQSGDYLARFDK------ 345
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAA-LEKTIRNVLTVLGLM 490
+M DD +T +A L D K +N K K + +S A+ L + N+ VLG++
Sbjct: 346 -AMDDDFNTPEAMAVLFDVAKELN------KAKAEDQSGQSRASDLAGILLNLGKVLGIL 398
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
SE L ++ A + A ++ I+ R AR K++ +DA R L A+ I L
Sbjct: 399 QRSPSEYLQGDQQDADEVA-----EIEALIKARNDARAAKDWPAADAARDGLNALNIILE 453
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 454 DGPSGTTWR 462
>gi|197122993|ref|YP_002134944.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. K]
gi|229558614|sp|B4UGC3.1|SYC_ANASK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|196172842|gb|ACG73815.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. K]
Length = 481
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/483 (49%), Positives = 306/483 (63%), Gaps = 20/483 (4%)
Query: 83 SRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNFT 142
++KRELV P GK+ +YVCG T YD SH+GHAR YV +DV+ R+LR G EV +VRNFT
Sbjct: 11 AQKRELV-PLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRARGLEVRFVRNFT 69
Query: 143 DVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQI 202
DVDDKII RANE GEDPI+L+ R+ + FH+DM L L P VEPRVS H+P I+ +I ++
Sbjct: 70 DVDDKIIQRANERGEDPIALASRFADAFHEDMDALGNLRPDVEPRVSGHIPEIVALIARL 129
Query: 203 LDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAK 261
++ GFAY +GDVY++V KFPEYG+LS R L+D AG RV K++P DFALWK+AK
Sbjct: 130 VERGFAYAPGNGDVYYAVRKFPEYGRLSKRNLDDLIAGARVEPGEAKRDPLDFALWKAAK 189
Query: 262 EGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNN 321
GEP WESPWG GRPGWHIECSAM+ +LG D+H GG DLVFPHH NEIAQS AA ++
Sbjct: 190 PGEPAWESPWGKGRPGWHIECSAMTQKHLGAPIDLHAGGKDLVFPHHTNEIAQSVAATSD 249
Query: 322 S-----HISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
YW+HNGFV ID EKMSKSLGNFFTIR V+ + ALR FL+GTHYR N
Sbjct: 250 GLHAEDFARYWMHNGFVQIDDEKMSKSLGNFFTIRDVLARFDGEALRFFLLGTHYRRDFN 309
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
+S L A R+ +Y+T+ E+ + + F A++ D
Sbjct: 310 FSDQVLAEAERRLSALYETVEKAERLGAGA------------APAAEPAFVERARAALDD 357
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T VL +++ N L RKGKK LAA + R V VLG++ ++
Sbjct: 358 DFNTPQVLGIVAEAFTEAN-ALADRKGKKSPEEKARLAAFARGARAVGAVLGILDRPPAQ 416
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L +R++A R + +V + I +R AR K++ +SDAIR L A G+ LMD P GT
Sbjct: 417 ALSAIRDRAAARRGIDGGEVERSIAERAAARAAKDFARSDAIRDALLARGVVLMDGPQGT 476
Query: 557 TWR 559
TW+
Sbjct: 477 TWK 479
>gi|93005831|ref|YP_580268.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
gi|109894926|sp|Q1QC19.1|SYC_PSYCK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|92393509|gb|ABE74784.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
Length = 488
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/496 (43%), Positives = 304/496 (61%), Gaps = 19/496 (3%)
Query: 70 ASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLR 129
A A +QL +Y++++ +++ KP GKVGMYVCG+T YD HIGHARV V FD+ R+L
Sbjct: 8 ADAMSQLVIYDSLTGRKQAFKPLATGKVGMYVCGMTVYDYCHIGHARVMVGFDMAVRWLA 67
Query: 130 HLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVS 189
LGY+V YVRN TD+DDKII RA E GE+ +L++R+ H+D L CL P EPR +
Sbjct: 68 QLGYDVNYVRNITDIDDKIITRAAENGEEIGTLTQRFITAMHEDATALGCLSPDAEPRAT 127
Query: 190 DHMPHIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRK 248
DH+ + MI ++ N +AY D GDVY++VD F +YG+LS R L+D +AG RV V++ K
Sbjct: 128 DHIDEMQQMIETLVSNDYAYAGDNGDVYYAVDSFADYGKLSKRNLDDMQAGSRVEVENDK 187
Query: 249 KNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHH 308
+NP DF LWK+AK EP W S WG GRPGWHIECSAMS LG++FDIHGGG DL FPHH
Sbjct: 188 RNPFDFVLWKAAKPDEPQWASAWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQFPHH 247
Query: 309 ENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIG 368
ENEIAQS AA + W+H GF+ +D EKMSKSLGNFFTIR VM Y P +R FL+
Sbjct: 248 ENEIAQSEAATGCEYARNWMHVGFINVDGEKMSKSLGNFFTIRDVMAKYLPETVRFFLLS 307
Query: 369 THYRSPINYSVVQLESASERIFYIYQTLHDCEKA---LSLLDAAALKDSIPPDTVTSINK 425
+HYRS +N+S L+ + + +YQ L E+ + ++D A + ++ +
Sbjct: 308 SHYRSQVNFSDSALDESHNSLSRLYQALKVAEQQKGKVLIIDEALINNAYA-------SA 360
Query: 426 FHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLT 485
DF+ +M+DD +++ ++ L + IN +A +E+ L + ++ +
Sbjct: 361 VGQDFIKAMNDDFNSSTAISVLFGLARDINK-------ASKAQDVETAWQLAQHLKALAQ 413
Query: 486 VLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAV 545
L ++ + LQ + LT++ + I +R A+ NK + ++D IR L
Sbjct: 414 TLNILQQPVQQ-FLQAVIGEVAEDSLTDEAIDGLIIERADAKTNKNFARADEIRVQLKEA 472
Query: 546 GIALMDSPVGTTWRPA 561
GI L DS GTTWR A
Sbjct: 473 GIELEDSRAGTTWRRA 488
>gi|46143889|ref|ZP_00133878.2| COG0215: Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208389|ref|YP_001053614.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|187629818|sp|A3N0S3.1|SYC_ACTP2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|126097181|gb|ABN74009.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 459
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/492 (46%), Positives = 294/492 (59%), Gaps = 40/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR+LGY +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E H+D DL+ L P VEPR + H+P I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ +++ NG AY DGDV F V+ F +YG LS + LE +AG RV + S KKNP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YW+H G +TID EKMSKSLGNFFTIR ++E Y LR F + HYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS+ L+ A + +Y +L C+ ++ V ++ F A+M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSVE---------------VAGGEQYVEAFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T LA L + + +N L K A+RL+ LA VLGL+
Sbjct: 347 DDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAG----------VLGLLYQ 396
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
E LQ D D+V + I+ R A+ K + +D +R L A+ I L
Sbjct: 397 D-PEAFLQ--------GDADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVL 447
Query: 550 MDSPVGTTWRPA 561
D+P GTTWR A
Sbjct: 448 EDTPNGTTWRKA 459
>gi|436840386|ref|YP_007324764.1| cysteinyl-tRNA synthetase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432169292|emb|CCO22660.1| cysteinyl-tRNA synthetase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 485
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/482 (43%), Positives = 297/482 (61%), Gaps = 3/482 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++RK+E P KV +Y CG+T YDL HIGHAR V FD+L RYLR Y+V +
Sbjct: 3 LYNTLNRKKEEFVPADGNKVSLYACGITAYDLCHIGHARSSVVFDILVRYLRFKEYDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTD+DDKII RANE G L+ ++ EF+ DM L+ L +EP+ ++H+P +I+
Sbjct: 63 VRNFTDIDDKIINRANESGVSAAELAEKFIGEFYMDMDKLNILRADIEPKCTEHIPEMIE 122
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ +++ G AY GDVYF V F YG+LSGR +ED ++G R+ K++P DFAL
Sbjct: 123 LTKTLIEKGNAYSTASGDVYFKVRSFEGYGKLSGRNIEDLQSGARIKPGEEKEDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWH+ECSAMS YL FDIHGGG DL FPHHENEIAQS
Sbjct: 183 WKAAKPGEPSWESPWGRGRPGWHLECSAMSEKYLSLPFDIHGGGQDLSFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA +W+HNGFV I+SEKMSKSLGNFFTIR ++E + P LR FL+ HYRSP++
Sbjct: 243 AATGKEMARFWVHNGFVQINSEKMSKSLGNFFTIRDILEKFMPETLRYFLLTMHYRSPLD 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
+S LE A + I +Y + +AL + K ++P D + I++ + +M D
Sbjct: 303 FSFEALEEAEKGIRRVYTAMEQMNEALQKKKWS--KAALPADVLAEIDEAEKGWNEAMED 360
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D++T + + ++ + + +K ++ + ++ TVLG+ +
Sbjct: 361 DMNTAGAMGHIFTLIRLAGRIAEDKAWRKSEGGRDAWVRILDDMKTWGTVLGIFTEEPKV 420
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L L+ L+R + +V + + R ARK+K++ +SD IR +L +G+ + D+P G
Sbjct: 421 FLENLKLCMLERKGIEVAKVEELVAARQDARKSKDFARSDEIRDELIELGVDVKDTPQGP 480
Query: 557 TW 558
W
Sbjct: 481 AW 482
>gi|57640379|ref|YP_182857.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
gi|68735029|sp|Q5JD45.1|SYC_PYRKO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|57158703|dbj|BAD84633.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
Length = 476
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/482 (44%), Positives = 290/482 (60%), Gaps = 14/482 (2%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E KP EG+V MYVCG T YD +HIGHAR Y+ FDV+ RYL H GY V
Sbjct: 5 IYNTLTRQKEEFKPLREGEVRMYVCGPTVYDYTHIGHARTYIAFDVIRRYLEHKGYTVLM 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTD+DDKII RANE GEDP L+ ++ + F +DM L P + PRV++H+ IID
Sbjct: 65 VMNFTDIDDKIIKRANETGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIQDIID 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++ + G+AY VYF V KF +YG+LS KLED G RV KKNP DFALW
Sbjct: 125 FIRKLQEKGYAYEGSDGVYFEVRKFKDYGKLSKVKLEDLVKGARVEPGEGKKNPEDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K AK GEP WESPWG GRPGWHIECS MS YLG SFDIHGGG DL+FPHHENEIAQ+ A
Sbjct: 185 KKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGSDLIFPHHENEIAQTEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ + YW+H GF+ ++ EKMSKSLGNF TIR+ +E Y P +RLF++ HYRSP++Y
Sbjct: 245 CTGHEWVRYWMHTGFLMVNGEKMSKSLGNFVTIREALERYDPEVIRLFVLQRHYRSPLDY 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
+ LE A + +Y TL + A+ + + + +I F +M DD
Sbjct: 305 TEEGLEHAKNNLERLYNTLENIRVAMERAEISFKWGEEEFEAYEAIRDGRKKFYDAMDDD 364
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T L A+ + IN L + K+++ L + + V V G+ + E
Sbjct: 365 FNTAEALKAVFEVSNAINRYLTQVEKPKESI----LRKAWEFFKMVSEVFGIFEDYFRE- 419
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
++A E + I+ R RK ++++ +D IR +L +GI L D+P GT
Sbjct: 420 ---------QKAGEEEALIKLLIDVRAQLRKERKFDLADKIRDELRNLGIQLEDTPQGTV 470
Query: 558 WR 559
W+
Sbjct: 471 WK 472
>gi|91774855|ref|YP_544611.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
gi|122985612|sp|Q1H417.1|SYC_METFK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91708842|gb|ABE48770.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
Length = 455
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/486 (47%), Positives = 299/486 (61%), Gaps = 36/486 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R ++ P + GKV MYVCG+T YD H+GHARV V FD++ R+LR GYEV
Sbjct: 2 LKIYNTLARAKQTFSPIIPGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRSSGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARANE GE +L+ R+ ++D L P +EPR +D++ +
Sbjct: 62 TYVRNITDIDDKIIARANENGETINALTDRFIAAMNEDAARLGVWRPDLEPRATDYIHEM 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +++ AY D GDVY++V F YG+LSG+ LED RAGERV VD+ K++P DF
Sbjct: 122 IAMIVALIEKHHAYAADNGDVYYAVSSFASYGKLSGKSLEDLRAGERVEVDAHKRDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W+SPWGPGRPGWHIECSAM A +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWDSPWGPGRPGWHIECSAMGARHLGPHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + ++YW+HNGF+ +D EKMSKSLGNFFTIR+V+E Y +R F++ HYRSP
Sbjct: 242 SEGAHGCTFVNYWMHNGFIRVDDEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + + +Y TL E L LD D P+ F ++
Sbjct: 302 LNYSSHHLDDAKQALTRLYNTLRGRE--LPQLDI----DWRQPEA--------ERFKQAL 347
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKK-QAMRLESLAALEKTIRNVLTVLGLMSTG 493
DD +T A L + N R G QA L++LA LGL+
Sbjct: 348 DDDFNTPEAFAVLFELASEAN-----RTGSAVQAALLKALAGQ----------LGLLQRD 392
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L K A L+ D++ + I +R ARK K + ++D IR L A GI L D+P
Sbjct: 393 PDEFL-----KGEAVAGLSPDEIERLIAERLAARKCKNFAEADRIRDALTAQGIILEDTP 447
Query: 554 VGTTWR 559
GT+WR
Sbjct: 448 QGTSWR 453
>gi|307245827|ref|ZP_07527913.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307254800|ref|ZP_07536627.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307259241|ref|ZP_07540971.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306853529|gb|EFM85748.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306862326|gb|EFM94293.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306866908|gb|EFM98766.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 459
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/492 (46%), Positives = 294/492 (59%), Gaps = 40/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR+LGY +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E H+D DL+ + P VEPR + H+P I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPRATKHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ +++ NG AY DGDV F V+ F +YG LS + LE +AG RV + S KKNP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YW+H G +TID EKMSKSLGNFFTIR ++E Y LR F + HYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS+ L+ A + +Y +L C+ ++ V ++ F A+M
Sbjct: 302 LNYSLNNLDLARSALERLYTSLRGCDLSVE---------------VAGGEQYVEAFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T LA L + + +N L K A+RL+ LA VLGL+
Sbjct: 347 DDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAG----------VLGLLYQ 396
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
E LQ D D+V + I+ R A+ K + +D +R L A+ I L
Sbjct: 397 D-PEAFLQ--------GDANNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVL 447
Query: 550 MDSPVGTTWRPA 561
D+P GTTWR A
Sbjct: 448 EDTPNGTTWRKA 459
>gi|407692004|ref|YP_006816793.1| cysteinyl-tRNA ligase [Actinobacillus suis H91-0380]
gi|407388061|gb|AFU18554.1| cysteinyl-tRNA ligase [Actinobacillus suis H91-0380]
Length = 459
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/492 (46%), Positives = 294/492 (59%), Gaps = 40/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR+LGY +
Sbjct: 2 LKIYNTLKREKEEFKPINSNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E H+D DL+ L P VEPR + H+P I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ +++ NG AY DGDV F V+ F +YG LS + LE +AG RV + S KKNP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YW+H G +TID EKMSKSLGNFFTIR ++E Y LR F + HYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS+ L+ A + +Y +L C+ ++ + ++ F A+M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSVEAVGG---------------EQYVEAFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLL--HTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
DD +T LA L + + +N L K A+RL+ LA VLGL+
Sbjct: 347 DDDFNTPGALAVLFEIAREVNKLKTEDVAKANGLAVRLKELAG----------VLGLLYQ 396
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
E LQ D D+V + I+ R A+ K + +D +R L A+ I L
Sbjct: 397 D-PEAFLQ--------GDADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVL 447
Query: 550 MDSPVGTTWRPA 561
D+P GTTWR A
Sbjct: 448 EDTPNGTTWRKA 459
>gi|392407156|ref|YP_006443764.1| cysteinyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
gi|390620292|gb|AFM21439.1| cysteinyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
Length = 474
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/487 (43%), Positives = 314/487 (64%), Gaps = 22/487 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN ++R+++ P +GKVG YVCG T YD HIG+AR +V FD L RY+ H G+EV
Sbjct: 3 LMLYNDLTRRKDEFIPLHQGKVGFYVCGPTVYDYIHIGNARPFVVFDTLRRYMEHKGFEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YV+NFTD+DDK+I +ANELG L+ R+ + + +D+ L +V P ++H+ I
Sbjct: 63 VYVQNFTDIDDKMINKANELGITVKELAERFIKAYFEDVTPLGVRHATVHPLATEHIDEI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I +I++I++ G AY V+G+VYF V FP YG+LSG+ LE+ +AG R+ VD+RKK+P DF
Sbjct: 123 IALISRIMERGHAYVVEGNVYFDVKSFPGYGKLSGQGLEELQAGARIEVDARKKHPLDFV 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+ K GEP+W+SPWGPGRPGWHIECSAM+ YLG + DIHGGG DL+FPHHENEIAQS
Sbjct: 183 LWKARKPGEPWWDSPWGPGRPGWHIECSAMAMKYLGETIDIHGGGSDLIFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA + YWIHNG++ I+ EKMSKSLGN T R+++ Y PLA+RLF++G HYRSP+
Sbjct: 243 EAATGKQFVRYWIHNGYLLINKEKMSKSLGNILTARELIGKYQPLAVRLFILGAHYRSPL 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSL-LDAAALKDSIPPDTVTS--INKFHNDFLA 432
++S L A + Q L +C L ++ + KD+ PDT I K + F
Sbjct: 303 DFSEESLTQAVRSM----QRLRNCYSDLIFYMERSEEKDT--PDTWLDDVIRKGYIKFCE 356
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
++ DD +T L ++ + ++ +N+ L ++ +L +K V ++G++
Sbjct: 357 ALDDDFNTAGALGSVFEIVRDLNNYLKD----SASLDKNALINAKKFFDAVEEIMGVI-- 410
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
G + E L+ D++ + I++R AR+ +++ ++DAIR +LA+ GI L D+
Sbjct: 411 GIDTIFATAEE-------LSPDEIEKLIKERNEARRKRDFARADAIRNELASKGIILEDT 463
Query: 553 PVGTTWR 559
P+GT W+
Sbjct: 464 PLGTRWK 470
>gi|190150242|ref|YP_001968767.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307263581|ref|ZP_07545196.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|229558612|sp|B3GXR0.1|SYC_ACTP7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189915373|gb|ACE61625.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871224|gb|EFN02953.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 459
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/492 (46%), Positives = 293/492 (59%), Gaps = 40/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR+LGY +
Sbjct: 2 LKIYNTLKREKEEFKPINSNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E H+D DL+ L P VEPR + H+P I
Sbjct: 62 RYVRNITDVDDKIIKRALENNEMCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ +++ NG AY DGDV F V+ F +YG LS + LE +AG RV + S KKNP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YW+H G +TID EKMSKSLGNFFTIR ++E Y LR F + HYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS+ L+ A + +Y +L C+ ++ V ++ F A+M
Sbjct: 302 LNYSLNNLDLARSALERLYTSLRGCDLSVE---------------VAGGEQYVEAFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T LA L + + +N L K A RL+ LA VLGL+
Sbjct: 347 DDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAARLKELAG----------VLGLLYQ 396
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
E LQ D D+V + I+ R A+ K + +D +R L A+ I L
Sbjct: 397 D-PEAFLQ--------GDADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVL 447
Query: 550 MDSPVGTTWRPA 561
D+P GTTWR A
Sbjct: 448 EDTPNGTTWRKA 459
>gi|253995884|ref|YP_003047948.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
gi|253982563|gb|ACT47421.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
Length = 466
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/495 (46%), Positives = 300/495 (60%), Gaps = 39/495 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R+++ P V GKV MYVCG+T YD H+GHARV V FD++ R+LR GY V
Sbjct: 2 LKIYNTLAREKQTFTPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVSRWLRASGYNV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE E L++R+ + +D L L P +EP+ ++ + +
Sbjct: 62 TYVRNVTDIDDKIIKRANENNETIAQLTQRFIDAMDEDSAKLGVLRPDLEPKATEFVDGM 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++D GFAY +GDV++SV F YG+LSG+ LED RAGERV VDS KK+P DF
Sbjct: 122 LSMIAALIDKGFAYPAANGDVFYSVSSFQGYGKLSGKSLEDLRAGERVEVDSFKKDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWG GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWESPWGKGRPGWHIECSAMSSHHLGQHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSH-------ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLI 367
S AA +SH ++YW+HNGFV +D EKMSKSLGNFFTIR V+E Y +R F++
Sbjct: 242 SEAA--HSHDGKPCQMVNYWMHNGFVRVDDEKMSKSLGNFFTIRTVLEQYDAEVIRFFIL 299
Query: 368 GTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH 427
HYRSP+NYS Q L+D + AL+ L A + D + + +
Sbjct: 300 RAHYRSPLNYSD--------------QHLNDAKLALTRLYTALRGVDVSDDAIDWQHPYA 345
Query: 428 NDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVL 487
F +M DD +T +A L D +N K + A L+ LA +VL
Sbjct: 346 ARFKLAMDDDFNTPEAMAVLFDLANEVN----KTKSTEAAGLLKGLA----------SVL 391
Query: 488 GLMSTGYSEVL-LQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVG 546
GL+S E L + E V I R A++ K + ++D IRK+LA G
Sbjct: 392 GLLSRKSDEFLQAKTNANGAANDGAAELDVDAMIVKRLEAKQAKNFAEADRIRKELAEAG 451
Query: 547 IALMDSPVGTTWRPA 561
I L D+P GTTWR A
Sbjct: 452 IILEDTPQGTTWRSA 466
>gi|307250157|ref|ZP_07532117.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306857822|gb|EFM89918.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
Length = 459
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/492 (46%), Positives = 294/492 (59%), Gaps = 40/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR+LGY +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E H+D DL+ + P VEPR + H+P I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPRATKHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ +++ NG AY DGDV F V+ F +YG LS + LE +AG RV + S KKNP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YW+H G +TID EKMSKSLGNFFTIR ++E Y LR F + HYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS+ L+ A + +Y +L C+ ++ V ++ F A+M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSVE---------------VAGGEQYVEAFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T LA L + + +N L K A+RL+ LA VLGL+
Sbjct: 347 DDDFNTPGALAVLFEIAREVNKLKTEGMAKANGLAVRLKELAG----------VLGLLYQ 396
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
E LQ D D+V + I+ R A+ K + +D +R L A+ I L
Sbjct: 397 D-PEAFLQ--------GDANNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVL 447
Query: 550 MDSPVGTTWRPA 561
D+P GTTWR A
Sbjct: 448 EDTPNGTTWRKA 459
>gi|71065916|ref|YP_264643.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
gi|109894925|sp|Q4FRZ9.1|SYC_PSYA2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71038901|gb|AAZ19209.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
Length = 488
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/495 (44%), Positives = 308/495 (62%), Gaps = 17/495 (3%)
Query: 70 ASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLR 129
A A +QL +Y++++ +++ KP VEGKVGMYVCG+T YD HIGHARV V FD+ R+L
Sbjct: 8 ADAMSQLVIYDSLTGRKQSFKPLVEGKVGMYVCGMTVYDYCHIGHARVMVGFDMAVRWLA 67
Query: 130 HLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVS 189
LGY+V YVRN TD+DDKIIARA E GE+ +L++R+ H+D L C P+ EPR +
Sbjct: 68 QLGYDVNYVRNITDIDDKIIARAAENGEEIGALTQRFITAMHEDATALGCQSPNAEPRAT 127
Query: 190 DHMPHIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRK 248
D++ + MI ++ N +AY D GDVY++VD F +YG+LS R L+D +AG RV V++ K
Sbjct: 128 DYIDEMQQMIETLVSNDYAYAGDNGDVYYAVDSFADYGKLSKRNLDDMQAGSRVEVENDK 187
Query: 249 KNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHH 308
+NP DF LWK+AK EP W S WG GRPGWHIECSAMS LG++FDIHGGG DL FPHH
Sbjct: 188 RNPFDFVLWKAAKPDEPQWVSSWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQFPHH 247
Query: 309 ENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIG 368
ENEIAQS AA + W+H GF+ +D EKMSKSLGNFFTIR VM Y P +R FL+
Sbjct: 248 ENEIAQSEAATGCEYARNWMHVGFINVDGEKMSKSLGNFFTIRDVMAKYLPETVRFFLLS 307
Query: 369 THYRSPINYSVVQLESASERIFYIYQTLHDCE--KALSLLDAAALKDSIPPDTVTSINKF 426
+HYRS +N+S L+ A + +YQ L E K +L+ + D++ + S
Sbjct: 308 SHYRSQVNFSDSALDEAHNSLSRLYQALKVVEQQKGQTLI----VDDALINNAYASAPG- 362
Query: 427 HNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTV 486
DF+ +M+DD +++ ++ L + IN + +ES L + ++ +
Sbjct: 363 -QDFIKAMNDDFNSSTAISVLFGLARDINK-------ASKVEDIESAWQLAQQLKALAQT 414
Query: 487 LGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVG 546
L ++ + L + +A + LT++ + I +R A+ NK + ++D IR L G
Sbjct: 415 LNILQQPVQQFLQAVIGEAAEDG-LTDEAIDSLIIERADAKTNKNFARADEIRIQLKDAG 473
Query: 547 IALMDSPVGTTWRPA 561
I L DS GTTWR A
Sbjct: 474 IELEDSRAGTTWRRA 488
>gi|307256969|ref|ZP_07538746.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306864544|gb|EFM96450.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
Length = 459
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/490 (45%), Positives = 292/490 (59%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR+LGY +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E H+D DL+ L P VEPR + H+P I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ +++ NG AY DGDV F V+ F +YG LS + LE +AG RV + S KKNP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YW+H G +TID EKMSKSLGNFFTIR ++E Y LR F + HYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS+ L+ A + +Y +L C+ ++ V ++ F A+M
Sbjct: 302 LNYSLNNLDLARSALERLYTSLRGCDLSVE---------------VAGGEQYVEAFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA L + + +N L K + + ++ + VLGL+
Sbjct: 347 DDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAV--------CLKELAAVLGLLYQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
E LQ D D+V + I+ R A+ K + +D +R L A+ I L D
Sbjct: 398 PEAFLQ--------GDANNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLED 449
Query: 552 SPVGTTWRPA 561
+P GTTWR A
Sbjct: 450 TPNGTTWRKA 459
>gi|345872177|ref|ZP_08824115.1| cysteinyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
gi|343919258|gb|EGV30008.1| cysteinyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
Length = 463
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/488 (46%), Positives = 306/488 (62%), Gaps = 27/488 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++N+++R++++ P GKV MYVCG+T YD H+GHARV V FDV+YRYLR LGY V
Sbjct: 2 LQIHNSLTRQKDVFTPIEPGKVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRALGYAV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE L+ R+ + +D L LPPS EPR + HM I
Sbjct: 62 TYVRNITDIDDKIIRRAAENGETFQELTERFIQAMREDGDALGVLPPSQEPRATGHMSEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ ++D G AY D GDVY++V +F YG+LSG+ +D RAG RV + K++P DF
Sbjct: 122 LAMVETLVDKGMAYVADNGDVYYAVGQFTGYGKLSGKDPQDLRAGARVEIGESKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWKSAK GEP WESPWG GRPGWHIECSAMS LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKSAKPGEPAWESPWGMGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A ++ W+HNGFV ++ EKMSKSLGNFFT+R++++ Y +R F++ +HYRSP
Sbjct: 242 SEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQRYQAEEVRYFILTSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY L++A + +Y L +P + F A+M
Sbjct: 302 LNYDDENLQNARGALTRLYTALR----------------GLPEVEPAFGETYRERFSAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T V LA L D ++ IN + T + AAL +R + +LG++ G
Sbjct: 346 DDDFNTPVALAVLFDLVREINRVRPTDMARA--------AALGAELRRLGEMLGILQ-GD 396
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+EV L+ + + DL++ ++ I++RT AR ++++ +D IRK+LA G+ L D P
Sbjct: 397 AEVYLRGGPSSTE-DDLSDARIEALIQERTQARADRDWAAADRIRKELADAGVQLDDGPQ 455
Query: 555 GTTWRPAL 562
GTTWR AL
Sbjct: 456 GTTWRRAL 463
>gi|303251228|ref|ZP_07337406.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307252540|ref|ZP_07534436.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|302649770|gb|EFL79948.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306860132|gb|EFM92149.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 459
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/492 (46%), Positives = 294/492 (59%), Gaps = 40/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR+LGY +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E H+D DL+ + P VEPR + H+P I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPRATKHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ +++ NG AY DGDV F V+ F +YG LS + LE +AG RV + S KKNP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YW+H G +TID EKMSKSLGNFFTIR ++E Y LR F + HYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS+ L+ A + +Y +L C+ ++ V ++ F A+M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSVE---------------VAGGEQYVEAFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T LA L + + +N L K A+RL+ LA VLGL+
Sbjct: 347 DDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAG----------VLGLLYQ 396
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
E LQ D D+V + I+ R A+ K + +D +R L A+ I L
Sbjct: 397 D-PEAFLQ--------GDADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVL 447
Query: 550 MDSPVGTTWRPA 561
D+P GTTWR A
Sbjct: 448 EDTPNGTTWRKA 459
>gi|414153547|ref|ZP_11409870.1| Cysteine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454945|emb|CCO07774.1| Cysteine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 486
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/482 (43%), Positives = 292/482 (60%), Gaps = 1/482 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+++ ++ P+ +GKV MYVCG T Y+ H+G+AR V FD + RY + GY+V Y
Sbjct: 3 IYNTLTKTKQEFIPREKGKVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYFIYKGYQVNY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII RA E DP+ L++RY EF +D L+ + P+VS+H+ IID
Sbjct: 63 VQNFTDVDDKIIKRAWEEQTDPLELAQRYIREFFKDADALNVMRADKHPKVSEHIAEIID 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I Q+ G AY DGDVYF+V FP YG+LSGR LED +AG RV +D RKK+P DFALW
Sbjct: 123 LIKQLEQQGHAYVADGDVYFAVRSFPGYGKLSGRSLEDMQAGARVEIDPRKKDPMDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK GEP W SPWG GRPGWHIECSAM+A YLG+ FDIHGGG DL+FPHHENEIAQS A
Sbjct: 183 KAAKPGEPSWPSPWGAGRPGWHIECSAMAAKYLGNGFDIHGGGFDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
AC YW+HNGF+T++ EKMSKSLGNFF +R+++ + P +R +L+ THYRSP+++
Sbjct: 243 ACGQPFARYWMHNGFITVNQEKMSKSLGNFFLVREILAKFPPEVVRWYLLSTHYRSPLDF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
+L A + + + L +AL L A D + DF +M DD
Sbjct: 303 DDEKLAMAGKGLERLKTALRLLYEALELPQQQAAMADEGGDLADKLATLRLDFEKAMDDD 362
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T + ++ + K IN + GK + + L ++ VLG+
Sbjct: 363 FNTALAISVFFELAKEINIFVGRLDGKLTDRQKDLLVKAHDLFKDFNGVLGVFKEDQQSG 422
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
L L + L + + ++ R AR K++ +D IR L +G+ L D+P G
Sbjct: 423 RL-LIDAVNTDNKLVDGLINLIVKVRQAARSQKDWATADTIRDGLKELGVILEDTPQGVR 481
Query: 558 WR 559
W+
Sbjct: 482 WK 483
>gi|78485268|ref|YP_391193.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
gi|109894958|sp|Q31H54.1|SYC_THICR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78363554|gb|ABB41519.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
Length = 456
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/485 (46%), Positives = 306/485 (63%), Gaps = 34/485 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT +R++E P KVG+YVCGVT YD H+GHARV V FD + R+LR LGY+V
Sbjct: 3 LKIYNTETRQKETFTPIQPNKVGLYVCGVTVYDYCHVGHARVMVVFDTVVRHLRSLGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E SL+ R+ + H+D L+ L P +EP+ +++M I
Sbjct: 63 TYVRNITDIDDKIIQRALENKESIQSLTSRFIDAMHEDEKALNVLRPDMEPKATEYMDEI 122
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI+ +++ FAY + GDVYF V +YG+LSG+ +E+ +G RV ++S KK+P DF
Sbjct: 123 ETMISTLIEKDFAYPAENGDVYFHVKADDDYGRLSGKNIEELDSGSRVEINSVKKDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK++KE EP W+SPWG GRPGWHIECSAMS LG+ FDIHGGG+DL FPHHENEIAQ
Sbjct: 183 VLWKASKENEPAWQSPWGDGRPGWHIECSAMSTKCLGNHFDIHGGGLDLSFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A +++ W+H GFV ID EKMSKSLGNFFTIR+V++ YHP +R FL+ +HYRSP
Sbjct: 243 SECATGEHYVNSWMHCGFVRIDDEKMSKSLGNFFTIREVLKQYHPEVIRYFLLASHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL L+ A D P + +K +F+A+M
Sbjct: 303 VNYSEENLDVAKASVGRLYS-------ALELVPA----DQAEP----AESKLEAEFMAAM 347
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T +A L + K +N KQ + LAAL K + N + +L + +
Sbjct: 348 NDDFNTPQAMAVLFELAKEVN---------KQ--KSPGLAALLKKLANQIGLLEQTAESF 396
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ +DLT++ + I +R ARK K++ +SD IR +L A GI L+DS
Sbjct: 397 F-------KSQPSDSDLTDEMIEALIVERAEARKAKDFSRSDEIRDELLAQGIELLDSAE 449
Query: 555 GTTWR 559
GT+WR
Sbjct: 450 GTSWR 454
>gi|187631658|sp|Q0A7N3.2|SYC_ALHEH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 462
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/488 (46%), Positives = 302/488 (61%), Gaps = 33/488 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++N++++++E +P G V MYVCG+T YD H+GHAR V FD++ RYLRHLGY V
Sbjct: 2 LHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVVFDMVARYLRHLGYRV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA ELGE +++ R+ H+D L LPP EPR + H+ I
Sbjct: 62 TFVRNITDIDDKIIRRAAELGEPMGAVTERFIRAMHEDAEALGVLPPDHEPRATGHIDDI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI ++++ G AY D GDVYF+V +PEYG+LSG + ED RAG RV VD K++P DF
Sbjct: 122 IAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSGERQEDLRAGARVEVDEGKRDPVDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+A+ GEP W SPWG GRPGWHIECSAMS LG FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 ALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGGGLDLKFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + ++YW+HNG V I+ EKM+KSLGNFFT+R+V+ + A+RLFL+ +HYRSP
Sbjct: 242 SECATGHPFVNYWMHNGHVRINDEKMAKSLGNFFTVREVLSEHRAEAVRLFLLSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS+ L A + +Y AL L A + ++ P F F A+M
Sbjct: 302 LNYSLDGLRQAQGALERLYL-------ALRGLPEAPVPEADP-------QGFRARFHAAM 347
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA L + + +N L +Q AA +R + VLGL+
Sbjct: 348 DDDFNTPEALAVLFELAREVNRL-------RQGDDDAGAAAPGALLRVLGGVLGLLQDD- 399
Query: 495 SEVLLQLREKALKRADLTED---QVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
E+ L+ D D ++ + RT ARKN+++ ++D IR +LA GI L D
Sbjct: 400 -------PERFLRGGDAGGDEDAEIDALVARRTEARKNRDFAEADRIRDELAERGIILED 452
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 453 GPQGTTWR 460
>gi|335049775|ref|ZP_08542761.1| cysteine--tRNA ligase [Megasphaera sp. UPII 199-6]
gi|333762270|gb|EGL39774.1| cysteine--tRNA ligase [Megasphaera sp. UPII 199-6]
Length = 481
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/487 (45%), Positives = 306/487 (62%), Gaps = 13/487 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L++YNT++RK+E P G+V MYVCG+TPY+ SH+G+AR +VT+DV+ RYL HLGY V
Sbjct: 4 LYVYNTLTRKKEKFVPLTTGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLGYAV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+++NFTDVDDKII AN +++ RY + M LH + PRVS+HMP I
Sbjct: 64 THIQNFTDVDDKIIHAANGEQVRWDTIANRYIASYFDVMDALHVRHADIYPRVSEHMPEI 123
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I MI +LD G AY V+ DVY+SV+KF +YG+LSGR L+D +AG R+ VD+RK +P DFA
Sbjct: 124 IQMIQTLLDKGMAYVVEQDVYYSVEKFVDYGKLSGRTLDDMQAGARIEVDTRKHHPMDFA 183
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK AKEGEP WESPWG GRPGWHIECSAMS YLG +FD HGGG DL+FPHHENEIAQS
Sbjct: 184 LWKGAKEGEPSWESPWGQGRPGWHIECSAMSCKYLGKTFDFHGGGSDLIFPHHENEIAQS 243
Query: 316 CAACNNS-HISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
A S + YW+HNGF+TI+SEKMSKSL NFF ++ V+ Y P A+R FLI HYRSP
Sbjct: 244 EACTGVSPMVRYWLHNGFITINSEKMSKSLHNFFLVKDVLAYYDPDAVRFFLISNHYRSP 303
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++++ +LE + + + ++ + + ++ A K + +T + DF +M
Sbjct: 304 LDFTDARLEEMTRSLERLRTSIMNVLELATM--PAGGKSAEAAALLTEAQQVAEDFETAM 361
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + AAL + K +N + + +++ + + +LG++ + +
Sbjct: 362 CDDFNTALAAAALFELAKKVNIYREAVVNNGVPVDTSVITEVKRIFKMMTDILGILESAW 421
Query: 495 SEVLLQLREKALKRADLTEDQVLQR--IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ AD +E L +E R R+ K+YE +DAIR L A+GI + DS
Sbjct: 422 N--------GQTSSADASEYAALVEAVLEIRKECREKKQYELADAIRDKLQALGITIEDS 473
Query: 553 PVGTTWR 559
P G W+
Sbjct: 474 PQGARWK 480
>gi|388257084|ref|ZP_10134264.1| cysteinyl-tRNA synthetase [Cellvibrio sp. BR]
gi|387939288|gb|EIK45839.1| cysteinyl-tRNA synthetase [Cellvibrio sp. BR]
Length = 466
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/493 (44%), Positives = 306/493 (62%), Gaps = 41/493 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E+ KP GK+ MYVCG+T YD HIGHARV V FDV+ ++LR G++V
Sbjct: 2 LQIYNTLTRQKEIFKPIYPGKISMYVCGITVYDYCHIGHARVLVAFDVITKFLRSQGWDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE+ +L++R+ + H+D L P +EPR + ++ I
Sbjct: 62 SYVRNITDIDDKIIKRANENGEEFSALTKRFIDYMHEDEARLGIARPDIEPRATAYIDQI 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+DM ++D GFAY ++GDVY+ V +F +YG+L+ + +++ G R+ VD K++P DF
Sbjct: 122 VDMNKTLIDKGFAYAAINGDVYYRVTRFADYGKLTNKNVDELLVGARIEVDEVKEDPRDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W+SPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWKSPWGNGRPGWHIECSAMSKNCCGETFDIHGGGPDLPFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +++YW+H G V +D EKMSKSLGNFFTIR V+E YHP +R L+ +HYRSP
Sbjct: 242 SEAANGCKYVNYWMHAGAVRVDGEKMSKSLGNFFTIRDVLEKYHPEVVRFLLVSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPD-TVTSINKFHNDFLAS 433
INY+ L A + Y L D D +P T + + ++ F+ +
Sbjct: 302 INYAEDNLIEARTGLERFYGALRD------------YADVLPTSLTAMTASPYYTAFVEA 349
Query: 434 MSDDLHTTVVLAALSDPLKTIN------DLLHTRKGKKQAMRLESLAALEKTIRNVLTVL 487
M+DD +T V LA + D ++ +N DL G+ +A+ L +L
Sbjct: 350 MNDDFNTRVALAGMFDLVRDLNNAKSNPDLACDLAGQLKALGL---------------IL 394
Query: 488 GLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGI 547
G++ EV LQ A + D V + I +R A+K+K+Y ++D IRK+L A G+
Sbjct: 395 GVLQEN-PEVFLQ----AGGSDQIAADNVERLIAERIQAKKDKQYARADEIRKELLAAGV 449
Query: 548 ALMDSPVGTT-WR 559
L D+ GTT WR
Sbjct: 450 VLEDARDGTTQWR 462
>gi|377821178|ref|YP_004977549.1| cysteinyl-tRNA synthetase [Burkholderia sp. YI23]
gi|357936013|gb|AET89572.1| cysteinyl-tRNA synthetase [Burkholderia sp. YI23]
Length = 465
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/490 (45%), Positives = 300/490 (61%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R ++L P EG+V MYVCG+T YD H+GHAR++V FD++ R+LR GY+V
Sbjct: 4 LRIYNTLARDKQLFTPLREGEVRMYVCGITVYDYCHVGHARMFVVFDIVQRWLRESGYKV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E +L+ R+ + H+DM L +EPR +D +P +
Sbjct: 64 TYVRNITDIDDKIIRRAVENNEPIKALTHRFIDAMHEDMDALGVARADIEPRATDFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI + NG+AY DGDV ++V KF +YG+LSG+ +ED RAGERVA + K++P DF
Sbjct: 124 LGMIDALQANGYAYHAKDGDVNYAVRKFADYGKLSGKSIEDLRAGERVAANDAKEDPLDF 183
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AK GEP W+S WG GRPGWHIECSAM LG FDIHGGGMDL FPHHENE
Sbjct: 184 VLWKQAKPGEPVDSGWDSKWGRGRPGWHIECSAMGCTLLGDQFDIHGGGMDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGFV IDSEKMSKSLGNFFTIR+V+E + +R F+ HY
Sbjct: 244 IAQSEGATGKTFVNYWMHNGFVQIDSEKMSKSLGNFFTIREVLEKFDAEVVRFFIARAHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDF 430
RSP+NYS V ++ A + +Y ALKD P + N+ + F
Sbjct: 304 RSPLNYSDVHIDDAKNALTRLY---------------TALKDVEPDNQQLDWNEANAQRF 348
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
++M+DD +T V ++ L D +N TR +AL + ++ + VLGL+
Sbjct: 349 QSAMNDDFNTPVAVSVLFDLASEVN---RTRD-----------SALARQLKELAGVLGLL 394
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
LQ + LT ++ +I +R A++ K Y ++D IR +L GIAL
Sbjct: 395 QR-EPRAFLQQAGGTGSQEGLTPQEIEAKIAERIAAKQAKNYAEADRIRAELLEAGIALE 453
Query: 551 DSPVGTT-WR 559
D P G+T WR
Sbjct: 454 DKPGGSTEWR 463
>gi|126173835|ref|YP_001049984.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
gi|386340595|ref|YP_006036961.1| cysteinyl-tRNA synthetase [Shewanella baltica OS117]
gi|187631633|sp|A3D302.1|SYC_SHEB5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|125997040|gb|ABN61115.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
gi|334862996|gb|AEH13467.1| cysteinyl-tRNA synthetase [Shewanella baltica OS117]
Length = 459
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 298/488 (61%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R+++ KP GK+GMYVCGVT YDL HIGH R +V+FD++ RYLR+ GYEV
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TDVDDKII RANE E +L+ R E HQD L+ L P EPR + H+ I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ +L G AY DGDV FSV +P+YG+LSG+ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y + D + L++ A A +F F A+M
Sbjct: 302 LNYSEDNLKQARSALERLYTAIKDVD--LTVAAAPA-------------EEFVAKFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ IN L T + +AL T++ + VLGL+S
Sbjct: 347 DDDFNTPEAYSVLFDMVREINRLKLT--------DMAQASALAVTLKQLADVLGLLSQ-- 396
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+A + + D+V + I +R AR K++ +D R L +G+ L D
Sbjct: 397 -------EPEAFFQGGGSYDEVAEIEALIVERNRARTEKDWAAADVARNCLNELGVELED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPSGTTWR 457
>gi|18977396|ref|NP_578753.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
gi|18893083|gb|AAL81148.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
Length = 483
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/488 (44%), Positives = 290/488 (59%), Gaps = 12/488 (2%)
Query: 72 ASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHL 131
L +YNT+++++E KP EG+V MYVCG T YD H+GHAR Y+ FDV+ RYL H
Sbjct: 4 GKNMLKVYNTLTKQKEEFKPLREGEVKMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHK 63
Query: 132 GYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDH 191
GY V V NFTD+DDKII RA E GEDP L+ R+ + F +DM L P + PRV+DH
Sbjct: 64 GYTVLMVMNFTDIDDKIIKRARETGEDPKELAERFIKIFLEDMEALKVKPADIYPRVTDH 123
Query: 192 MPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNP 251
+ II+ I ++ + G+AY +YF V KFPEYG+LSG K+ED + G RV KKNP
Sbjct: 124 IDDIIEFIGKLKEKGYAYEGSDGIYFEVKKFPEYGKLSGVKIEDLQKGARVEPGEGKKNP 183
Query: 252 ADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
DFALWK AK GEP W+SPWG GRPGWHIECS MS+ YLG SFDIHGGG DL+FPHHENE
Sbjct: 184 EDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + + YW+H GFV + EKMSKSLGNF TIR++++ Y P +R F++ HY
Sbjct: 244 IAQSEACFGHEWVKYWLHTGFVMVKGEKMSKSLGNFVTIRELLKRYEPEVIRFFVLQKHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RSP+ Y+ L+ A + +Y TL + AL + + + T I + F
Sbjct: 304 RSPLEYTEEGLQHAKNNLQRLYNTLENIRVALRNAEISYTWGELEFKTYEIIREGKRKFY 363
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M DD +T L A+ + IN L K+++ ++L K + V V
Sbjct: 364 EAMDDDFNTAEALKAVFEVANAINKYLTEANKPKESILRKALEFF-KIVSEVFGV----- 417
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ + + ++ + L E V E R RK K YE +D IR++L +GI L D
Sbjct: 418 --FEDYFREETKEREESEKLIELLV----EVRKQLRKEKRYELADMIREELKKLGIQLED 471
Query: 552 SPVGTTWR 559
TTW+
Sbjct: 472 RGSETTWK 479
>gi|397651531|ref|YP_006492112.1| cysteinyl-tRNA ligase [Pyrococcus furiosus COM1]
gi|30316338|sp|Q8U227.2|SYC_PYRFU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|393189122|gb|AFN03820.1| cysteinyl-tRNA ligase [Pyrococcus furiosus COM1]
Length = 477
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/484 (45%), Positives = 290/484 (59%), Gaps = 12/484 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++++E KP EG+V MYVCG T YD H+GHAR Y+ FDV+ RYL H GY V
Sbjct: 2 LKVYNTLTKQKEEFKPLREGEVKMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGYTV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
V NFTD+DDKII RA E GEDP L+ R+ + F +DM L P + PRV+DH+ I
Sbjct: 62 LMVMNFTDIDDKIIKRARETGEDPKELAERFIKIFLEDMEALKVKPADIYPRVTDHIDDI 121
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I+ I ++ + G+AY +YF V KFPEYG+LSG K+ED + G RV KKNP DFA
Sbjct: 122 IEFIGKLKEKGYAYEGSDGIYFEVKKFPEYGKLSGVKIEDLQKGARVEPGEGKKNPEDFA 181
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK AK GEP W+SPWG GRPGWHIECS MS+ YLG SFDIHGGG DL+FPHHENEIAQS
Sbjct: 182 LWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIAQS 241
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A + + YW+H GFV + EKMSKSLGNF TIR++++ Y P +R F++ HYRSP+
Sbjct: 242 EACFGHEWVKYWLHTGFVMVKGEKMSKSLGNFVTIRELLKRYEPEVIRFFVLQKHYRSPL 301
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
Y+ L+ A + +Y TL + AL + + + T I + F +M
Sbjct: 302 EYTEEGLQHAKNNLQRLYNTLENIRVALRNAEISYTWGELEFKTYEIIREGKRKFYEAMD 361
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T L A+ + IN L K+++ ++L K + V V +
Sbjct: 362 DDFNTAEALKAVFEVANAINKYLTEANKPKESILRKALEFF-KIVSEVFGV-------FE 413
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
+ + ++ + L E V E R RK K YE +D IR++L +GI L D
Sbjct: 414 DYFREETKEREESEKLIELLV----EVRKQLRKEKRYELADMIREELKKLGIQLEDRGSE 469
Query: 556 TTWR 559
TTW+
Sbjct: 470 TTWK 473
>gi|372489694|ref|YP_005029259.1| cysteinyl-tRNA synthetase [Dechlorosoma suillum PS]
gi|359356247|gb|AEV27418.1| cysteinyl-tRNA synthetase [Dechlorosoma suillum PS]
Length = 476
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/494 (46%), Positives = 299/494 (60%), Gaps = 27/494 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R+++ P GKV MYVCG+T YD H+GHARV V FD +YR+LR G +V
Sbjct: 2 LKIYNTIAREKQEFVPIEAGKVKMYVCGMTVYDFCHLGHARVLVVFDAVYRWLRASGLDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE L+ R+ +D L P+ EPR ++++P +
Sbjct: 62 TYVRNITDIDDKIIRRAVENGETIGQLTDRFIAAMDEDAAALGVQKPTHEPRATEYVPQM 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ +I Q+ NG AY+ DGDV FSV KFP YG+LSG+ L+D RAGERV VDS K++P DF
Sbjct: 122 LGLIGQLEANGLAYKAADGDVNFSVRKFPGYGRLSGKSLDDLRAGERVEVDSAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP WESPWG GRPGWHIECSAMS+ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKHAKAGEPAWESPWGAGRPGWHIECSAMSSDLLGKHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + ++YW+HNGFV +D EKMSKSLGNFFTIR V++ Y +R F++ HYRSP
Sbjct: 242 SEGAHGCTFVNYWMHNGFVRVDDEKMSKSLGNFFTIRDVLKKYDAEVVRFFILRAHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDFLAS 433
+NYS L+ A + + +Y ALK + N+ H F A+
Sbjct: 302 LNYSDAHLDDARQALTRLY---------------TALKAAPAEAVAVDWNEAHAQRFQAA 346
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAA----LEKTIRNVLTVLGL 489
M DD +T LA L D N K A +L++LA L ++ + L +
Sbjct: 347 MDDDFNTPEALAVLFDLANEAN----RSKDSAVAAQLKALAGVLGLLARSPEDYLKGRVV 402
Query: 490 MSTGYSEVLLQLREKA--LKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGI 547
+G + + L + L ++E + RI+ R A+K K + ++D +R +L A GI
Sbjct: 403 YGSGNATMSLSGNGEGTLLVGGGISESDIEARIQARIDAKKAKNFAEADRLRAELLAAGI 462
Query: 548 ALMDSPVGTTWRPA 561
L DS GTTWR A
Sbjct: 463 VLEDSAQGTTWRRA 476
>gi|359785387|ref|ZP_09288539.1| cysteinyl-tRNA synthetase [Halomonas sp. GFAJ-1]
gi|359297316|gb|EHK61552.1| cysteinyl-tRNA synthetase [Halomonas sp. GFAJ-1]
Length = 482
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/487 (45%), Positives = 299/487 (61%), Gaps = 15/487 (3%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
+ +YNT++R++E P V GKV MYVCG+T YD H+GHARV V FDV+ RYLRH GY+V
Sbjct: 1 MQIYNTLTRRKEPFTPLVAGKVSMYVCGMTVYDYCHLGHARVMVAFDVITRYLRHRGYDV 60
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKI+ RA+E GE +L+ R + H D L+ LPPS EPR + H+ I
Sbjct: 61 TYVRNITDIDDKILKRADENGETISALTERMIDAMHDDEARLNVLPPSREPRATGHIGDI 120
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI ++D GFAY +GDVY+ V KF YG+L+ R+L+D R+G RV VD K++P DF
Sbjct: 121 IAMIETLIDKGFAYPAKNGDVYYRVRKFANYGKLNNRQLDDMRSGARVDVDVHKEDPLDF 180
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK E W SPWG GRPGWHIECSAMS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 181 VLWKAAKPTEAHWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEIAQ 240
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++++ W+H G V ++ EKMSKSLGNFFTIR V+ + P +R L+ +HYRS
Sbjct: 241 SEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRYLLVASHYRSA 300
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSL---LDAAALKDSIPPDTVTSINKFHNDFL 431
INYSV L A + + Y L E S+ L A + + + + F
Sbjct: 301 INYSVDSLVEARKSLTRFYTALEGVEVQESVGEELQQAPTSEVAFIASKEEVAAYSERFT 360
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M DD +T LA L D + +N + + + L ++ + +VLGL+
Sbjct: 361 TAMDDDFNTPEALAVLFDLAREVN--------RAKGESPQKALLLALELKRLASVLGLLQ 412
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
L ++ + L+E ++ +I R A+ +K++ ++DAIR +LAA+GI L D
Sbjct: 413 QSPDTFLKGAQQHGVA---LSETEIEAKIAQRKEAKASKDFAQADAIRDELAALGIILKD 469
Query: 552 SPVGTTW 558
S GTTW
Sbjct: 470 SREGTTW 476
>gi|332306241|ref|YP_004434092.1| cysteinyl-tRNA synthetase [Glaciecola sp. 4H-3-7+YE-5]
gi|332173570|gb|AEE22824.1| cysteinyl-tRNA synthetase [Glaciecola sp. 4H-3-7+YE-5]
Length = 464
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/489 (46%), Positives = 299/489 (61%), Gaps = 33/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++EL P E KVG+YVCG+T YDLSH+GHAR Y++FD++ RYLRH GYEV
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H D ++ L P +EPRV+ HMP I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTRALTERTIAMMHDDFAAINLLEPDIEPRVTTHMPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I +I +++ G AY+ GDV F V + +YG+LS + LE G RV VDS K +P DF
Sbjct: 122 IAIIERLIQRGHAYQAKSGDVLFDVSSYSDYGKLSKQDLEQLNMGSRVDVDSDKDDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+ K GEP W SPWG GRPGWHIECSAM+ +LG FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKTVKPGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +DSEKMSKSLGNFFT+R V++ + LR FL+ HYRS
Sbjct: 242 SCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLKQHDAETLRYFLMSAHYRSQ 301
Query: 375 INYS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
++YS + Q SA ER++ AL ++A D D + +K
Sbjct: 302 LSYSEDNITQARSALERLY----------TALRDVNANIQVDMQSGDYLARFDK------ 345
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAA-LEKTIRNVLTVLGLM 490
+M DD +T +A L D K +N K K + S A+ L + N+ VLG++
Sbjct: 346 -AMDDDFNTPEAMAVLFDVAKELN------KAKAEEQSGHSRASDLAGILLNLGKVLGIL 398
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
SE L ++ A + A ++ I+ R AR K++ +DA R L + I L
Sbjct: 399 QRSPSEYLQGDQQDADEVA-----EIEALIKARNDARAAKDWPAADAARDGLNVLNIILE 453
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 454 DGPSGTTWR 462
>gi|442803750|ref|YP_007371899.1| cysteine--tRNA ligase CysS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739600|gb|AGC67289.1| cysteine--tRNA ligase CysS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 462
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/479 (44%), Positives = 293/479 (61%), Gaps = 24/479 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT+++++E P G+V MY CG T YD HIG+AR ++ FDVL R+L + GY+V +
Sbjct: 3 LYNTLTKRKEEFIPLKPGEVKMYSCGPTVYDYFHIGNARPFIIFDVLRRFLEYRGYKVIF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDK+I RANE G+ ++ +Y E++ D L P+ PR ++++ IID
Sbjct: 63 VQNFTDIDDKMIRRANEEGKTVAEIAEKYIREYYVDAHGLGIKDPTYAPRATENIDAIID 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
MI ++D G+AY VDGDVYF KF EYG+LSG +LED G R+ VD RK+N DFALW
Sbjct: 123 MIKTLVDKGYAYVVDGDVYFKTSKFEEYGKLSGHRLEDLELGARIEVDERKENAMDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ K GEP W+SPWG GRPGWHIECSAM+ YLG + DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KAQKPGEPAWDSPWGKGRPGWHIECSAMANRYLGETIDIHSGGQDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
YW+HNGF+ I++EKMSKS GNFFT+R + + Y +R FL+ HYRSPIN+
Sbjct: 243 CNGKPFARYWLHNGFININNEKMSKSRGNFFTVRDIAKHYDYEVIRFFLLSAHYRSPINF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S LE A + IY+ C L + A KD+ D +++ + + F+ +M DD
Sbjct: 303 SDALLEQAKSALNRIYE----CRDNLRFFLSKAEKDTFEEDIYGNLDIYRDRFIEAMEDD 358
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
L+T LAA+ + ++ IN + GKK + L + + VLG+M Y
Sbjct: 359 LNTADALAAIFELVREINTRITANAGKKTISKALDL------LDELTGVLGIMRKEYEN- 411
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
DL E+ + IE+R AR + ++++D IR L +GI L D+P G
Sbjct: 412 ------------DLDEN-IRALIEERQKARAERNFKRADEIRDQLRKMGIELQDTPQGV 457
>gi|167624689|ref|YP_001674983.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
gi|189082075|sp|B0TLV2.1|SYC_SHEHH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167354711|gb|ABZ77324.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
Length = 459
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/488 (45%), Positives = 296/488 (60%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN+++R++E P GKVGMYVCGVT YDL HIGH R +V+FD++ RYLR+ GY+V
Sbjct: 2 LKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TDVDDKII RANE E SL+ R E H+D L+ P EPR + H+P I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCDSLTERLIAEMHKDFDSLNMARPDNEPRATQHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ ++++ AY GDV FSV FPEYG+LSG+ LE +AG RV V+ K++P DF
Sbjct: 122 IDMVERLIERDHAYVASSGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDTKRDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLAHYDAATVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + IY L D + LS+ A A +F F +M
Sbjct: 302 LNYSEDNLKQAKAALERIYTALKDLD--LSVEAAPA-------------QEFVAKFKTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ IN L +A + +AL ++ + VLG++
Sbjct: 347 DDDFNTPEAYSVLFDMVREINRL--------KATDMAKASALGVALKELADVLGILGQDV 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ + ++D+V + I +R AR K++ +D R L A+G+ L D
Sbjct: 399 DTFF---------KGEGSDDEVAEIEALIVERNRARAEKDWPAADVARDGLNALGVILED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPEGTTWR 457
>gi|312898320|ref|ZP_07757710.1| cysteinyl-tRNA synthetase [Megasphaera micronuciformis F0359]
gi|310620239|gb|EFQ03809.1| cysteinyl-tRNA synthetase [Megasphaera micronuciformis F0359]
Length = 482
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/497 (45%), Positives = 313/497 (62%), Gaps = 31/497 (6%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
+L +YNT+SRK+E KP G+V MYVCG+TPY+ SH+G+AR +VT+DV+ RYL+HLGY
Sbjct: 4 ELTVYNTLSRKKEAFKPVTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLKHLGYA 63
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V +++NFTDVDDKII AN +++ RY + + M LH PRVS+HM
Sbjct: 64 VTHIQNFTDVDDKIINAANGEEVSWDTIANRYIASYFEVMDKLHIQRADKYPRVSEHMDD 123
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
II MI+++++NG AY +DGDVY+ V F YG+LS R L+D AG R+ VD RK+NP DF
Sbjct: 124 IIAMISKLIENGHAYELDGDVYYRVQSFEHYGELSHRSLDDMMAGARIEVDDRKENPMDF 183
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK EP W+SPWG GRPGWHIECSAMS YLG FD HGGG DL+FPHHENEIAQ
Sbjct: 184 ALWKAAKPSEPSWDSPWGKGRPGWHIECSAMSLKYLGEPFDFHGGGSDLIFPHHENEIAQ 243
Query: 315 SCAACNNS-HISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
+ A CN+ ++YW+HNGF+TIDSEKMSKSL NFF ++ V+E Y P ALR FLI HYRS
Sbjct: 244 TEACCNHGPMVNYWVHNGFITIDSEKMSKSLNNFFLVKDVLEHYSPDALRYFLISNHYRS 303
Query: 374 PINYS---VVQLESASERI-FYIYQTLHDCEK---ALSLLDAAALKDSIPPDTVTSINKF 426
P+++S + ++ + ER+ I TL E+ S L AA L D+ +
Sbjct: 304 PLDFSDERLTEMTRSLERLGTAIDNTLWLLEQPSGGKSELSAALLADA---------QRT 354
Query: 427 HNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLES--LAALEKTIRNVL 484
DF +M DD +T + AA+ + K +N ++T + + +S L+ +++ + +
Sbjct: 355 MEDFETAMCDDFNTALASAAMFELAKKVN--IYTSEVSTNGVPADSAVLSEVKRIFKTMT 412
Query: 485 TVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRI--EDRTVARKNKEYEKSDAIRKDL 542
+LG++ ++ +AD + L + E R R K+Y +DAIR L
Sbjct: 413 DILGVLEDRWN--------GTAGKADDKDYAALMDVILELRQECRAQKQYALADAIRDKL 464
Query: 543 AAVGIALMDSPVGTTWR 559
+ +GI + DSP G W+
Sbjct: 465 SDLGITIEDSPQGARWK 481
>gi|337288279|ref|YP_004627751.1| cysteinyl-tRNA synthetase [Thermodesulfobacterium sp. OPB45]
gi|334902017|gb|AEH22823.1| cysteinyl-tRNA synthetase [Thermodesulfobacterium geofontis OPF15]
Length = 490
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/488 (44%), Positives = 307/488 (62%), Gaps = 12/488 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN++++K E P KV MYVCG+T YD SH+GHAR V FDV YR L++LGYEV
Sbjct: 7 LRIYNSLTKKIEDFIPLNPPKVTMYVCGITAYDSSHLGHARSAVIFDVFYRLLKYLGYEV 66
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII R+N+ G L+++Y EE+ + L L P+ EPR S+H+P I
Sbjct: 67 IYVRNITDIDDKIINRSNKEGIPWKELTQKYIEEYEKVTQALGLLKPTYEPRASEHIPEI 126
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I +I ++++ G AY+ +GDVYF V KFP YG+LSGRK+E+ AG R+ V +KKNP DFA
Sbjct: 127 ISLIEKLIEKGLAYQSNGDVYFEVTKFPSYGKLSGRKIEELIAGVRIEVSEKKKNPLDFA 186
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWKSAK GEPFWESPWG GRPGWHIECSAM+ YLG + DIHGGG+DL+FPHHENEIAQS
Sbjct: 187 LWKSAKPGEPFWESPWGKGRPGWHIECSAMALKYLGETIDIHGGGLDLIFPHHENEIAQS 246
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A Y+IH+G +T+ EKMSKSLGN+ T+ +++ +HP ++ FL+ THYRSP+
Sbjct: 247 EGATEKQFARYFIHHGLITVKGEKMSKSLGNYVTMEYLLKTFHPEVIKAFLLSTHYRSPL 306
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINK----FHNDFL 431
+Y +++ + I+ Y+TL+ +K A LK+ + + + K F N+F+
Sbjct: 307 DYREENIKNMEKAIYRFYETLYWLKK------AQPLKEGLLSEKARKLEKGLKDFENNFI 360
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVL-TVLGLM 490
+++ DD +T + L L I + + T+ + L +EK IR++ +LG+
Sbjct: 361 SALLDDFNTALALGHLFSFENEIYNFI-TKTPNLTTEEVLLLEKIEKKIRDLSGKILGIG 419
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
E R++ LK ++ ++ R ARK K + +D IR +L +GI L
Sbjct: 420 EREPDEFWNTERKRKLKIIKKDLKEIEDLVKKRESARKEKNFILADKIRDELKNLGIILK 479
Query: 551 DSPVGTTW 558
D+ T W
Sbjct: 480 DTRTETFW 487
>gi|290968519|ref|ZP_06560058.1| cysteine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
gi|290781515|gb|EFD94104.1| cysteine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
Length = 481
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/487 (45%), Positives = 306/487 (62%), Gaps = 13/487 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L++YNT++RK+E P G+V MYVCG+TPY+ SH+G+AR +VT+DV+ RYL HLGY V
Sbjct: 4 LYVYNTLTRKKEKFVPLTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLGYAV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+++NFTDVDDKII AN +++ RY + M LH + PRVS+HMP I
Sbjct: 64 THIQNFTDVDDKIIHAANGEQVRWDTIANRYIASYFDVMDALHVRHADIYPRVSEHMPEI 123
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I MI +LD G AY V+ DVY+SV+KF +YG+LSGR L+D +AG R+ VD+RK +P DFA
Sbjct: 124 IQMIQTLLDKGMAYVVEQDVYYSVEKFVDYGKLSGRTLDDMQAGARIEVDTRKHHPMDFA 183
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK AKEGEP WESPWG GRPGWHIECSAMS YLG +FD HGGG DL+FPHHENEIAQS
Sbjct: 184 LWKGAKEGEPSWESPWGQGRPGWHIECSAMSCKYLGKTFDFHGGGSDLIFPHHENEIAQS 243
Query: 316 CAACNNS-HISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
A S + YW+HNGF+TI+SEKMSKSL NFF ++ V+ Y P A+R FLI HYRSP
Sbjct: 244 EACTGVSPMVRYWLHNGFITINSEKMSKSLHNFFLVKDVLAYYDPDAVRFFLISNHYRSP 303
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++++ +LE + + + ++ + + ++ A K + +T + DF +M
Sbjct: 304 LDFTDARLEEMTRSLERLRTSIMNVLELATM--PAGGKSAEAAALLTEAQQVAEDFETAM 361
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + AAL + K +N + + +++ + + +LG++ + +
Sbjct: 362 CDDFNTALAAAALFELAKKVNIYREAVVNNGVPVDTSVITEVKRIFKMMTDILGILESAW 421
Query: 495 SEVLLQLREKALKRADLTEDQVLQR--IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ AD +E L +E R R+ K+YE +DAIR L A+GI + DS
Sbjct: 422 N--------GQTSSADASEYAALVEAVLEIRKECREKKQYELADAIRDKLQALGITIEDS 473
Query: 553 PVGTTWR 559
P G W+
Sbjct: 474 PQGARWK 480
>gi|269792622|ref|YP_003317526.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100257|gb|ACZ19244.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 468
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/491 (45%), Positives = 303/491 (61%), Gaps = 40/491 (8%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YN ++ ++E P EGKV YVCG T YD HIG+AR ++ FDV+ RYL HLGY+V Y
Sbjct: 5 VYNDLTNRKEPFVPLEEGKVRFYVCGPTVYDYFHIGNARPFIVFDVMRRYLEHLGYQVTY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDK+I RA E+G L+ R+ E ++QD L +V P+ ++ +PHII+
Sbjct: 65 VQNFTDIDDKMIKRAQEMGITVKELADRFIEAYYQDADALGIRRATVNPKATEEIPHIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I ++ G AY++DGDVYF V +P YG+L + LE+ ++G RV VD RK++P DFALW
Sbjct: 125 LIELLIQKGHAYQIDGDVYFDVMSYPPYGKLIKQDLEELQSGARVEVDPRKRHPLDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ K GEP W+SPWGPGRPGWHIECSAM +LG + D HGGG DLVFPHHENEIAQS A
Sbjct: 185 KAQKPGEPAWDSPWGPGRPGWHIECSAMCRHHLGDTIDFHGGGCDLVFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A + YW+HNG++ ID EKMSKSLGNF T R +M+ + PL +RLF++ HYRSPIN+
Sbjct: 245 ATGKPFVRYWVHNGYLMIDKEKMSKSLGNFMTARDLMKRFPPLVIRLFMLSAHYRSPINF 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTS------INKFHNDFL 431
S L A + + AL D+ PP T S I ++ +DF
Sbjct: 305 SEENLRQAQAALERLRNGWAQIRFAL---------DNPPPSTSESRELREQIARYRDDFH 355
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKT---IRNVLTVLG 488
+M DDL+T L A+ ++ N H +G LAALE+ +R+V ++G
Sbjct: 356 RAMDDDLNTAEALGAVFSLIRATNS--HLSRGDSP-----DLAALEEASNFLRDVDRIMG 408
Query: 489 LMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIA 548
++ G E L +AL IE+R ARK +++ K+DAIR L+++GI
Sbjct: 409 VI--GIDEDQLDRDVEAL-------------IEERNAARKARDFAKADAIRDRLSSMGIV 453
Query: 549 LMDSPVGTTWR 559
L D+P GT W+
Sbjct: 454 LEDTPQGTRWK 464
>gi|256829728|ref|YP_003158456.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256578904|gb|ACU90040.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 485
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/482 (44%), Positives = 291/482 (60%), Gaps = 3/482 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YN+++RK+E P G V MYVCG+T YD HIGHAR V FDVL RYLR++G +V +
Sbjct: 3 IYNSLTRKKEEFIPLKPGHVSMYVCGITAYDYCHIGHARSAVVFDVLVRYLRYIGMQVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTDVDDKII RAN G D S++R Y + F+ DM L L +EP+ ++H+ +I+
Sbjct: 63 VRNFTDVDDKIINRANREGTDFESIARSYIDAFYTDMDRLGILRADIEPKATEHIKEMIE 122
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ ++ AY GDVYF V + +YG+LSGR +ED +G R+ K++P DFAL
Sbjct: 123 LCENLIAKKHAYSTPSGDVYFRVRSYADYGKLSGRNIEDLMSGARIEPGEEKEDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK GEP W SPWGPGRPGWHIECSAMS YL FDIHGGG DL FPHHENE AQ+
Sbjct: 183 WKGAKPGEPSWPSPWGPGRPGWHIECSAMSERYLPLPFDIHGGGQDLAFPHHENERAQTE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA + + YW+HNGFV I+SEKMSKSL NF TIR ++ Y P LR FLI HYRSP++
Sbjct: 243 AATDKQFVRYWVHNGFVQINSEKMSKSLNNFVTIRDILANYLPEVLRFFLITKHYRSPLD 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
Y+ LE + + IY T E ++ A +P + V + SM+D
Sbjct: 303 YTSDALEESERALKRIYLTKTAAEAHVAGTKWTAT--PLPAEIVVEATALEAKWDDSMAD 360
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D++T L + +K +N +L + KK + + K VLGL S+
Sbjct: 361 DMNTAAALGHVFVLMKIVNRILEDKTLKKSEQGRDMIRHALKLFERWGEVLGLFLMPSSD 420
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L QL+E + R + D V ++++R AR K++ +SDAIR +L A+G+ + D+ G
Sbjct: 421 FLTQLKESRVLRRKIDTDLVQTKLQERKEARAAKDFARSDAIRDELLALGVTIQDTAQGV 480
Query: 557 TW 558
W
Sbjct: 481 QW 482
>gi|115378641|ref|ZP_01465792.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
gi|115364353|gb|EAU63437.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
Length = 458
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/464 (45%), Positives = 291/464 (62%), Gaps = 6/464 (1%)
Query: 101 VCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPI 160
+CG T Y HIG+AR + +FDV+ RYLR+ GY V YVRN+TDVDDKII A+E GE+P+
Sbjct: 1 MCGPTVYSYIHIGNARTFTSFDVVVRYLRYRGYRVHYVRNYTDVDDKIIKAAHETGEEPV 60
Query: 161 SLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVD 220
+L+ R+ + F D LH + P V P+VS+H+P I+ +I ++ G AY GDVYFSV
Sbjct: 61 ALAGRFVKIFQDDTRALHLVEPDVAPKVSEHLPEILRIIETLVAKGVAYESQGDVYFSVS 120
Query: 221 KFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHI 280
+PEY +LS RKL+D AGERV +K+ P DFALWK+AK GEP W+SPWG GRPGWHI
Sbjct: 121 SYPEYAKLSKRKLDDLCAGERVQPGEQKREPLDFALWKAAKPGEPSWDSPWGKGRPGWHI 180
Query: 281 ECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKM 340
ECSAMSA YLG SFDIHGG +DL+FPHHENEIAQS AA YW+H GF+ I+ KM
Sbjct: 181 ECSAMSAKYLGESFDIHGGALDLIFPHHENEIAQSEAASGKPFAKYWMHCGFLDIEGAKM 240
Query: 341 SKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCE 400
SKSLGN +R + ALR F + THYR P+++S + + R+ Y Y+TL +
Sbjct: 241 SKSLGNVVRLRDALTRVDAEALRFFFLSTHYRHPLHFSDKAIADSEYRLEYFYETLRKVD 300
Query: 401 KALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHT 460
+ + D P +F +F A+M DD + L ALS +N+L
Sbjct: 301 ERVGGKDFGQGPLHGEP------GRFLQEFEAAMDDDFNCPGALGALSGLFGLMNELTDK 354
Query: 461 RKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRI 520
K +A+ +L AL T+R V +VLGL ++ LL+ R++A+K + QV + +
Sbjct: 355 PPVKDKALVGRTLQALRDTVRKVSSVLGLFEDDPTQWLLRRRDRAVKERGIDVAQVERLL 414
Query: 521 EDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPALPL 564
+R ARK+K + ++D +R +L G+ +MD+ GT+W+ A P+
Sbjct: 415 SERNEARKSKNFAEADRLRSELKGQGVEIMDTVAGTSWKVAAPV 458
>gi|56460141|ref|YP_155422.1| cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
gi|61216136|sp|Q5QYP3.1|SYC_IDILO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56179151|gb|AAV81873.1| Cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
Length = 459
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 298/489 (60%), Gaps = 35/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++RK++L +P G VG+YVCGVT YD HIGHAR YV FD++ RYLR LGY V
Sbjct: 3 LTVFNTLTRKKQLFEPIQPGHVGIYVCGVTTYDYCHIGHARTYVAFDIVVRYLRKLGYSV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GED ++ R+ E H+D L+ + P +EPRV+ HM I
Sbjct: 63 KYVRNITDLDDKIIKRAAENGEDFHQVTERFIREMHKDFDALNLVRPDIEPRVTSHMDEI 122
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI ++++NG AY +GDV F V F +YG+LS + LE +AG RV VD+ K++P DF
Sbjct: 123 ILMIERLIENGNAYEAGNGDVLFDVSTFNDYGKLSRQDLEQLQAGSRVDVDAAKQDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWKSAK GEP W SPWG GRPGWHIECSAM+ +LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 183 VLWKSAKPGEPSWSSPWGEGRPGWHIECSAMNKKHLGSTFDIHGGGSDLSFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + ++ YW+H+G V +D+EKMSKSLGNFFTIR V+E Y +R FL+ +HYRS
Sbjct: 243 SCCANQSEYVKYWMHSGMVQVDNEKMSKSLGNFFTIRSVLEQYDAETVRYFLLSSHYRSQ 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTS--INKFHNDFLA 432
+NY+ L+ A + +Y L D I P T + +K+ F
Sbjct: 303 LNYTQENLDQAHSALERLYTALRD----------------ITPQTASEELRSKYWQSFQQ 346
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DDL+ ++ L + + IN + + ++ A L + + V+GL
Sbjct: 347 AMDDDLNAPEAMSVLFEIAREIN--------RNRESAPDTAAQLAHVLLELAEVMGL--- 395
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
L Q E+ L+ D ++ I R AR++K++ +D R +L +GI L D
Sbjct: 396 -----LQQSPEEFLQGDDDDVAKIEALIAKRNQAREDKDWAAADEARDELTNMGIVLEDG 450
Query: 553 PVGTTWRPA 561
GT WR A
Sbjct: 451 AEGTRWRRA 459
>gi|294101993|ref|YP_003553851.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
gi|293616973|gb|ADE57127.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
Length = 472
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/487 (42%), Positives = 297/487 (60%), Gaps = 18/487 (3%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN ++RK+E P EG+VG Y CG T YD HIG+AR ++ FDV RYL +GY+V
Sbjct: 3 LMLYNDLTRKKEPFIPLKEGEVGFYSCGPTVYDFFHIGNARPFIVFDVFRRYLEDIGYKV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTD+DDK+I RANE G L+ + +E+ +D L + PR +DHM I
Sbjct: 63 VFVQNFTDIDDKMINRANEEGITVKELADAFIKEYFEDADALGVRRADIYPRATDHMKEI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
++++ ++D G AY VDGDV+FSV+ FP YG+LS + +ED ++G R+ V+ +K++P DFA
Sbjct: 123 VEVVQTLIDKGHAYVVDGDVFFSVESFPGYGKLSKQSIEDLQSGSRIDVNEQKRHPLDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+ K GEP WESPWG GRPGWHIECS MS YLG++FDIH GG DL+FPHHENE+AQ+
Sbjct: 183 LWKAQKPGEPAWESPWGLGRPGWHIECSVMSTKYLGNTFDIHSGGSDLIFPHHENEVAQA 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA + +W+HNG++ ID EKMSKSLGNF T+R + Y PLA+R F++ HYRSPI
Sbjct: 243 EAATGMQFVRFWLHNGYLLIDKEKMSKSLGNFLTVRNARKKYSPLAIRYFMLSAHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
N+S L A+ + + D E AL + D+ ++ I + F M+
Sbjct: 303 NFSEEGLNQATGAVERLRNCWTDLEYALQSREQKEKDDT--EAFLSEIKQAETKFYEEMN 360
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T L ++ + ++ IN L ++ + A + + ++G+M
Sbjct: 361 DDFNTAGALGSVFEVVRLINTYLK----DNSSIDFKVCKAAQTFFTKIDGIMGIMGL--- 413
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
++ +L ++ IE+RT ARK +++ KSDAIR LA GI L D+P G
Sbjct: 414 ---------ESEKEELDTSEIESMIEERTAARKARDFAKSDAIRDQLAEKGIILEDTPEG 464
Query: 556 TTWRPAL 562
T W+ L
Sbjct: 465 TKWKKQL 471
>gi|338999452|ref|ZP_08638095.1| cysteinyl-tRNA synthetase [Halomonas sp. TD01]
gi|338763601|gb|EGP18590.1| cysteinyl-tRNA synthetase [Halomonas sp. TD01]
Length = 463
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/487 (44%), Positives = 301/487 (61%), Gaps = 27/487 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V GKV MYVCG+T YD H+GHARV V FDV+ RYLR+ GY+V Y
Sbjct: 3 IYNTLTRRKEPFTPLVAGKVSMYVCGMTVYDYCHLGHARVMVAFDVITRYLRYRGYDVTY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKI+ RA E GE +L+ R + H+D L LPPS EPR + H+ I+
Sbjct: 63 VRNITDIDDKILKRAEENGESISALTERMIQAMHEDEARLSVLPPSHEPRATGHIGDIVA 122
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI +++ FAY +GDVY+ V KF +YG+L+ R+L+D R+G RV VD K++P DF L
Sbjct: 123 MIQTLIEKDFAYAAANGDVYYRVRKFADYGKLNNRQLDDMRSGARVEVDVHKEDPLDFVL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GE W SPWG GRPGWHIECSAMS LG +FDIHGGG DL FPHHENEIAQS
Sbjct: 183 WKAAKPGEAHWHSPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA ++++ W+H G V ++ EKMSKSLGNFFTIR V+ + P +R L+ +HYRSPIN
Sbjct: 243 AATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRFLLVASHYRSPIN 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YSV L A + + Y L E +L ++ + F +M D
Sbjct: 303 YSVDSLHEARKSLTRFYTALEGVE----VLSGGGGDET----------GYAERFTTAMDD 348
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D ++ LA L D + +N R + + + + LA+ + + VLGL+ +
Sbjct: 349 DFNSPEALAVLFDLARDLN-----RAKSESSEKAQHLAS---ELTRLAGVLGLLQQN-PQ 399
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L+ ++ + L+E ++ +I R A+ NK++ ++DAIR +LA++GI L DS GT
Sbjct: 400 TFLKGNQQQVA---LSEAEIEAKIAQRKEAKANKDFAQADAIRDELASMGIILKDSREGT 456
Query: 557 TWRPALP 563
TW P
Sbjct: 457 TWVIEAP 463
>gi|313201928|ref|YP_004040586.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
gi|312441244|gb|ADQ85350.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
Length = 470
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 296/489 (60%), Gaps = 33/489 (6%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
T L YN+++R+++ P V GKV MYVCG+T YD H+GHARV V FD++ R+LR GY
Sbjct: 14 TMLKFYNSLAREKQTFVPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRTSGY 73
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
+V YVRN TD+DDKII RA E GE +L+ R+ +D L + P +EP+ ++H+
Sbjct: 74 DVTYVRNITDIDDKIIKRAQENGESIQALTSRFITAMDEDAARLGVMRPDLEPKATEHIT 133
Query: 194 HIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
++DMI +++ GFAY D GDV++SV F YG+LSG+ LED RAGERV +D K++P
Sbjct: 134 GMLDMIAALIEKGFAYPADNGDVFYSVSSFAGYGKLSGKSLEDLRAGERVEIDQYKRDPM 193
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DF LWK+AK GEP W+SPWG GRPGWHIECSAM A +LG FDIHGGG DL FPHHENEI
Sbjct: 194 DFVLWKAAKPGEPSWDSPWGKGRPGWHIECSAMGACHLGPHFDIHGGGQDLQFPHHENEI 253
Query: 313 AQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
AQS AA + ++YW+HNGF+ +D EKMSKSLGNFFTIRQV+E Y +R F++ YR
Sbjct: 254 AQSEAANGCTFVNYWMHNGFIRVDDEKMSKSLGNFFTIRQVLEKYDAEVVRFFILRAQYR 313
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
SP+NYS L+ A + + +Y L + L+L P T+ F A
Sbjct: 314 SPLNYSDHHLDDARQALTRLYTAL----RGLAL----------PTFTIDWQQPQAARFKA 359
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T+ A L + +N L L++
Sbjct: 360 AMDDDFNTSEAFAVLFELASEVNRTASLADAALLKALAGLLGLLQRD------------- 406
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
E LQ E A R + D++ Q I+ R AR++K + ++D IRK LA GI L DS
Sbjct: 407 --PETFLQGGESAQGR---SADEIEQFIQLRLQARQSKNFAEADRIRKQLADEGILLEDS 461
Query: 553 PVGTTWRPA 561
P GT+WR A
Sbjct: 462 PQGTSWRRA 470
>gi|149191898|ref|ZP_01870131.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
gi|148834246|gb|EDL51250.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
Length = 460
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/485 (46%), Positives = 308/485 (63%), Gaps = 29/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR++GY++
Sbjct: 2 LKIYNTLTRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYVGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RANE GE SL+ R E H D L+ P VEPR ++ + I
Sbjct: 62 KFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDVEPRATEFIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++D GFAY D GDV F V KF +YG+LS + L+ +AG RV V+S K++P DF
Sbjct: 122 IELVEKLIDRGFAYVADNGDVMFEVSKFDKYGKLSKQDLDQLQAGARVDVESAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V++ Y P +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLDHYDPETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L D+ P T ++ F A+M
Sbjct: 302 LNYSEDNLNQARSALERLYTSL----RGLDL-------DAEP----TGGEEYVTRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L G QA +L +L +R + V+G++ +
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRLKTVDLG--QASQLGAL------MRELADVIGIL---H 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L+ A ++ E + L ++ R +R +K++ +D R L +GI L D P
Sbjct: 396 QDPEAFLKGDAGDNDEVAEIEALIKL--RNDSRASKDWANADMARDKLTEMGIVLEDGPE 453
Query: 555 GTTWR 559
GTTWR
Sbjct: 454 GTTWR 458
>gi|386826602|ref|ZP_10113709.1| cysteinyl-tRNA synthetase [Beggiatoa alba B18LD]
gi|386427486|gb|EIJ41314.1| cysteinyl-tRNA synthetase [Beggiatoa alba B18LD]
Length = 464
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 305/485 (62%), Gaps = 26/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ + KP KV MYVCG+T YD H+GHARV V FD++ R+LR GY+V
Sbjct: 2 LTIYNTLTKDKAPFKPIEANKVRMYVCGMTVYDYCHVGHARVMVVFDMVARWLRASGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y+RN TD+DDKII RANE GED SL+ R+ + ++D L L P EPR + ++ HI
Sbjct: 62 TYIRNITDIDDKIINRANENGEDIYSLTERFIQAMYEDADALGVLRPDQEPRATQYIDHI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID+IT+++ G+AY + GDVY++V KF EYG+LSG+++ED RAGERV ++ K++P DF
Sbjct: 122 IDLITRLMKRGYAYTANNGDVYYAVGKFAEYGKLSGKRIEDLRAGERVDIEEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK EP W SPWG GRPGWHIECSAMS LG+ FDIHGGGMDL FPHHENEIAQ
Sbjct: 182 VLWKAAKPNEPSWASPWGNGRPGWHIECSAMSTHCLGNHFDIHGGGMDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A ++ W+HNGFV ++ EKMSKSLGNFFT+R V++ + +R F++ +HYRSP
Sbjct: 242 SEGATGEQFVNVWMHNGFVRVNEEKMSKSLGNFFTLRDVLQKFPAEVIRYFILNSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY QL++A + + +Y L E + LD K+S +F+ F +M
Sbjct: 302 LNYGDQQLDAAQQALTRLYTALRGLEDTGAPLD----KNS----------EFYQRFATAM 347
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T +A L D + +N L QA+ A+ + ++ + +LG++
Sbjct: 348 NDDFNTAEAIAVLFDLSREVNRL--RVDNSSQAV------AVAQQLKLLGGILGILQ--- 396
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
++ + + L+ D V + I +R ARK K + +SD IR L GI L D+
Sbjct: 397 ADPEAWFKRENTSTNGLSNDAVEKLIAERQAARKAKNWAESDRIRDMLKEQGIILEDAAG 456
Query: 555 GTTWR 559
TTWR
Sbjct: 457 VTTWR 461
>gi|253999955|ref|YP_003052018.1| cysteinyl-tRNA synthetase [Methylovorus glucosetrophus SIP3-4]
gi|253986634|gb|ACT51491.1| cysteinyl-tRNA synthetase [Methylovorus glucosetrophus SIP3-4]
Length = 456
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/487 (45%), Positives = 296/487 (60%), Gaps = 33/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R+++ P V GKV MYVCG+T YD H+GHARV V FD++ R+LR GY+V
Sbjct: 2 LKIYNSLAREKQTFVPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRTSGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R+ +D L + P +EP+ ++H+ +
Sbjct: 62 TYVRNITDIDDKIIKRAQENGESIQALTSRFITAMDEDAARLGVMRPDLEPKATEHITGM 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+DMI +++ GFAY D GDV++SV F YG+LSG+ LED RAGERV +D K++P DF
Sbjct: 122 LDMIAALIEKGFAYPADNGDVFYSVSSFAGYGKLSGKSLEDLRAGERVEIDQYKRDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W+SPWG GRPGWHIECSAM A +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWDSPWGKGRPGWHIECSAMGACHLGPHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + ++YW+HNGF+ +D EKMSKSLGNFFTIRQV+E Y +R F++ YRSP
Sbjct: 242 SEAANGCTFVNYWMHNGFIRVDDEKMSKSLGNFFTIRQVLEKYDAEVVRFFILRAQYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + + +Y L + L+L P T+ F A+M
Sbjct: 302 LNYSDHHLDDARQALTRLYTAL----RGLAL----------PTFTIDWQQPQAARFKAAM 347
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T+ A L + +N L L++
Sbjct: 348 DDDFNTSEAFAVLFELASEVNRTASLADAALLKALAGLLGLLQRD--------------- 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ E A R + D++ Q I+ R AR++K + ++D IRK LA GI L DSP
Sbjct: 393 PETFLQGGESAQGR---SADEIEQFIQLRLQARQSKNFAEADRIRKQLADEGILLEDSPQ 449
Query: 555 GTTWRPA 561
GT+WR A
Sbjct: 450 GTSWRRA 456
>gi|146292587|ref|YP_001183011.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
gi|166225305|sp|A4Y5H9.1|SYC_SHEPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145564277|gb|ABP75212.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
Length = 461
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 298/488 (61%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R+++ KP GK+GMYVCGVT YDL HIGH R +V+FD++ RYLR++GYEV
Sbjct: 4 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYEV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TDVDDKII RANE E +L+ R E H+D L+ L P EPR + H+ I
Sbjct: 64 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIAEI 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ +L G AY DGDV FSV +P+YG+LSG+ L+ +AG RV VD K+NP DF
Sbjct: 124 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDENKQNPMDF 183
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 243
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 244 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 303
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y + D + L++ A A +F F A+M
Sbjct: 304 LNYSEDNLKQARSALERLYTAIKDVD--LTVAAAPA-------------EEFIVKFKAAM 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ IN L T K A LA K + +VL +LG
Sbjct: 349 DDDFNTPEAYSVLFDMVRDINRLKATDIAKASA-----LAVAMKQLADVLGLLG------ 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
A + + ++D+V + I +R AR K++ +D R L +G+ L D
Sbjct: 398 ------QDPDAFFKGEGSDDEVAEIEALIVERNRARSEKDWAAADVARNRLDILGVVLED 451
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 452 GPSGTTWR 459
>gi|386313262|ref|YP_006009427.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
gi|319425887|gb|ADV53961.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
Length = 459
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 298/488 (61%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R+++ KP GK+GMYVCGVT YDL HIGH R +V+FD++ RYLR++GYEV
Sbjct: 2 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TDVDDKII RANE E +L+ R E H+D L+ L P EPR + H+ I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ +L G AY DGDV FSV +P+YG+LSG+ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDENKQNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y + D + L++ A A +F F A+M
Sbjct: 302 LNYSEDNLKQARSALERLYTAIKDVD--LTVAAAPA-------------EEFIAKFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ IN L T K A LA K + +VL +LG
Sbjct: 347 DDDFNTPEAYSVLFDMVRDINRLKATDIAKASA-----LAVAMKQLADVLGLLG------ 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
A + + ++D+V + I +R AR K++ +D R L +G+ L D
Sbjct: 396 ------QDPDAFFKGEGSDDEVAEIEALIVERNRARSEKDWVAADVARNRLDILGVVLED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPSGTTWR 457
>gi|120599417|ref|YP_963991.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
gi|166225307|sp|A1RL92.1|SYC_SHESW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120559510|gb|ABM25437.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
Length = 461
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 298/488 (61%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R+++ KP GK+GMYVCGVT YDL HIGH R +V+FD++ RYLR++GYEV
Sbjct: 4 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYEV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TDVDDKII RANE E +L+ R E H+D L+ L P EPR + H+ I
Sbjct: 64 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIAEI 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ +L G AY DGDV FSV +P+YG+LSG+ L+ +AG RV VD K+NP DF
Sbjct: 124 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDENKQNPMDF 183
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 243
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 244 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 303
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y + D + L++ A A +F F A+M
Sbjct: 304 LNYSEDNLKQARSALERLYTAIKDVD--LTVAAAPA-------------EEFIVKFKAAM 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ IN L T K A LA K + +VL +LG
Sbjct: 349 DDDFNTPEAYSVLFDMVRDINRLKATDIAKASA-----LAVAMKQLADVLGLLG------ 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
A + + ++D+V + I +R AR K++ +D R L +G+ L D
Sbjct: 398 ------QDPDAFFKGEGSDDEVAEIEALIVERNRARSEKDWPAADVARNRLNELGVVLED 451
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 452 GPSGTTWR 459
>gi|257126844|ref|YP_003164958.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
gi|257050783|gb|ACV39967.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
Length = 483
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/483 (42%), Positives = 302/483 (62%), Gaps = 10/483 (2%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNTM+ K E K E KV MYVCG T Y+ H+G+AR V FD L RY H G EV +
Sbjct: 3 LYNTMTNKIEEFKTIEENKVKMYVCGPTVYNYIHLGNARPIVVFDTLARYFEHKGMEVEF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII ++ E G +S +Y + F +D+ L+ L P+V+++M +I+
Sbjct: 63 VQNFTDVDDKIINKSMEEGTSASEVSEKYIKYFFEDISKLNILESVKRPKVTENMSEVIE 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++DNGFAY DGDVYF V K+ +YG+LS +K+E+ G R+ V KKNP DFALW
Sbjct: 123 IIQKLIDNGFAYEKDGDVYFEVKKYKDYGKLSNQKIEELELGARIDVSEIKKNPVDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K K+GEPFWESPWG GRPGWHIECSAM+ YLG +FDIHGGG DLVFPHHENEIAQS
Sbjct: 183 KKKKDGEPFWESPWGQGRPGWHIECSAMAKKYLGDTFDIHGGGQDLVFPHHENEIAQSKC 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A + + +YW+HNGF+ I+ +KMSKSLGNFF +R+++E + +RLF++ THYR PIN+
Sbjct: 243 AYHGNFANYWLHNGFIQINGDKMSKSLGNFFLLREILEKFSGNVIRLFILSTHYRKPINF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S +E + + I ++++ E + +++ + I++F F +M++D
Sbjct: 303 SFENMEDTKKALQNIIKSMNKFENIVEKYKNEKIENVKNSEFSQKIDEFDKKFEEAMAED 362
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLE---SLAALEKTIRNVLTVLGLMSTGY 494
++T LA + D ++ N + T + + + E S +L+ I NV +
Sbjct: 363 MNTPQALATIFDQIRETNKFISTNESEFSTIYYEIKKSYDSLKAKIENVFGIA------- 415
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
EV ++E+ + +LT+ + I+ R+ AR K ++ SD IR +L +G+ + D+
Sbjct: 416 IEVENAVKEEDGENMELTKKLIELLIKLRSEARSEKNFKLSDEIRDELKVLGVEIKDNKD 475
Query: 555 GTT 557
G+T
Sbjct: 476 GST 478
>gi|317491067|ref|ZP_07949503.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920614|gb|EFV41937.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 461
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/486 (46%), Positives = 296/486 (60%), Gaps = 30/486 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP G+VGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE L+ R E H+D L+ P +EPR + H+P I
Sbjct: 62 KYVRNVTDVDDKIIKRALENGETCDQLTERMLAEMHKDFDSLNIARPDLEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ Q++ G AY +GDV F+VD P+YG LS + LE +AG RV V K+NP DF
Sbjct: 122 IEIVEQLITRGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSLGNFFTIR V+E Y +R FL+ HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLEHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL+ + P + F F +M
Sbjct: 302 LNYSEENLKQARSALERLY---------------TALRGTEPQAEPAGGDVFEARFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D + +N L ++ + AL +R + +LGL+
Sbjct: 347 DDDFNTPEAYSALFDLAREVNRL--------KSEDMAQANALAAELRKLAKILGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTE-DQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
EV LQ +AD +E Q+ I+ R AR K++ +D+ R L A+GI L D P
Sbjct: 398 PEVFLQ----GGAQADDSEVAQIEALIKQRNDARAAKDWAMADSARDQLNALGIVLEDGP 453
Query: 554 VGTTWR 559
GTTWR
Sbjct: 454 QGTTWR 459
>gi|323494384|ref|ZP_08099494.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
gi|323311367|gb|EGA64521.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
Length = 460
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/485 (45%), Positives = 305/485 (62%), Gaps = 29/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RANE GE SL+ R E H D L+ P VEPR ++ + I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY +GDV F V KF EYG+LS + L+ +AG RV VDS K++P DF
Sbjct: 122 IELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLNHYDSETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L AA + ++ + F +M
Sbjct: 302 LNYSEENLNQARASLERLYTSL----RGLDLTTPAAGGE-----------EYVSRFTEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN + +A + + +AL +R + V+G++ Y
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRI--------KAEDIAAASALGSLMRELADVIGIL---Y 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L+ A ++ E + L ++ R +R +K++ +D R L +GI L D P
Sbjct: 396 QDPEAFLKGDAGNDDEVAEIEALIKL--RNDSRASKDWANADLARDKLNEMGIVLEDGPE 453
Query: 555 GTTWR 559
GTTWR
Sbjct: 454 GTTWR 458
>gi|373454259|ref|ZP_09546131.1| cysteine-tRNA ligase [Dialister succinatiphilus YIT 11850]
gi|371935992|gb|EHO63729.1| cysteine-tRNA ligase [Dialister succinatiphilus YIT 11850]
Length = 481
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/498 (44%), Positives = 312/498 (62%), Gaps = 36/498 (7%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
++ +YNT+++++E+ KP G+ +YVCGVTPY+ HIG+AR VT+DV+ RYL ++GY+
Sbjct: 3 EIKVYNTLTKEKEVFKPITPGEAKIYVCGVTPYNHPHIGNARPAVTWDVIRRYLEYVGYK 62
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V +V+NFTDVDDKII +AN G D ++S RY + + Q M LH V PRVS+HM
Sbjct: 63 VEFVQNFTDVDDKIINKANAEGTDWKTISDRYIDAYFQVMDALHVRRADVYPRVSEHMDD 122
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
II M+ ++ G AY + GDVY+ + F +YG+LSGRK+ED AG R+ V+ K+NP DF
Sbjct: 123 IIHMVETLIQKGHAYVLGGDVYYDISTFKDYGRLSGRKIEDMLAGARIEVNDEKRNPGDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK GEPFWESPWG GRPGWHIECSAMS YLG +FD HGGG DL+FPHHENEIAQ
Sbjct: 183 ALWKAAKPGEPFWESPWGKGRPGWHIECSAMSIHYLGKTFDFHGGGSDLIFPHHENEIAQ 242
Query: 315 S--CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
S C C+ + YW+HNGF+TI+SEKMSKSL NFF ++ V+E Y ALR FL+ THYR
Sbjct: 243 SEGCTGCH--FVDYWLHNGFITINSEKMSKSLNNFFLVKDVLEKYSGDALRYFLLSTHYR 300
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKD---SIPPDTVTSINKFHND 429
SP+++S +LE A + + + + K LS + + + + ++ + FH
Sbjct: 301 SPLDFSDDRLEEAEKNMDKLKDVIGRV-KELSGREGSEVTEASKALEKAAEDDMKVFHE- 358
Query: 430 FLASMSDDLHTTVVLAALSDPLKTIN---DLLHTRKGKKQAMRLESLAALEKTIRNVLTV 486
+M DD +T + A+ + K IN + +H+ G +A SL K + +L +
Sbjct: 359 ---AMDDDFNTGLATGAMFELAKAINVYYNDVHSGIGFNKA----SLEKAGKAFKTILDI 411
Query: 487 LGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIED-----RTVARKNKEYEKSDAIRKD 541
LG++ EK K+ + +D+ + + R ARK K+Y+ +D IR
Sbjct: 412 LGIL------------EKEWKKTEAYDDKDYNDLMNVILAVRQSARKAKQYQLADEIRDK 459
Query: 542 LAAVGIALMDSPVGTTWR 559
L +GI + D+P G W+
Sbjct: 460 LGEIGIVIEDTPTGARWK 477
>gi|157374677|ref|YP_001473277.1| cysteinyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
gi|187631638|sp|A8FTH6.1|SYC_SHESH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157317051|gb|ABV36149.1| Cysteine--tRNA ligase [Shewanella sediminis HAW-EB3]
Length = 459
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/488 (45%), Positives = 298/488 (61%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN+++R++E KP GKVGMYVCG+T YDL HIGH R +V+FD++ RYLR+ GY+V
Sbjct: 2 LKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
++RN TDVDDKII RANE E SL+ R E H+D L+ P EPR + H+P I
Sbjct: 62 NFLRNITDVDDKIIKRANENKESCESLTERLIGEMHRDFDALNMKRPDFEPRATLHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ ++++ AY +GDV FSV FPEYG+LSG+ L+ +AG RV V+ K++P DF
Sbjct: 122 IDMVEKLIEKEHAYVSGNGDVLFSVSSFPEYGRLSGQNLDQLQAGARVEVEDTKRDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H G V +D EKMSKSL NFFTIR V+E Y +R FL+ HYRS
Sbjct: 242 SCCAHNTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLEHYDAATVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y +L K L L AA S +++ F +M
Sbjct: 302 LNYSEDNLKQAKSALERLYTSL----KGLDLSVEAA-----------SADEYVAKFKVAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L + ++ IN L K ++ ++ ++ + VLG++
Sbjct: 347 DDDFNTPEAYSVLFEMVREINRLKEADNAKASSLGVK--------LKELADVLGILDQDV 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ + + D+V + I +R AR K++ +D R L A+G+ L D
Sbjct: 399 DTFF---------KGEGSTDEVAEIEALIAERNRARAEKDWPAADVARDGLNALGVILED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPEGTTWR 457
>gi|381196562|ref|ZP_09903904.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii WJ10621]
Length = 473
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 309/488 (63%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+VEG + MYVCG+T YD HIGHARV V FD + R+LR G+ V Y
Sbjct: 6 LYNSEQRKKVEFVPRVEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWSVKY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L+ R+ + ++D +L CL P PR +D++ +
Sbjct: 66 VRNITDIDDKIIKRANENGESITQLTDRFIQAMNEDAENLGCLHPDEAPRATDYIDQMQS 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V+KF +YG+LSGRKLED +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVEKGTAYPSANGDVYFQVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VM+ +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMDKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++A L +++ + +F+ ++M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFKAYQQAYGDTQVDTLDETL-------LERFN----SAM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N R K+Q + E A T+R++ +LGL+
Sbjct: 355 RDDFNTAEAIAVLFEVNKELN-----RAVKEQ--QTEQAAIYYATLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L + ++AL L+E+Q+ I+ R A+K KE+ K+D IR+ L G+ L D+
Sbjct: 408 EEFLKSDIGQEALA---LSEEQIEDLIQQRQDAKKAKEFAKADEIRQSLLDQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTIWRRA 472
>gi|322514668|ref|ZP_08067696.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
gi|322119366|gb|EFX91475.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
Length = 459
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/492 (46%), Positives = 293/492 (59%), Gaps = 40/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR+LGY +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E H+D DL+ L P VEPR + H+P I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ +++ NG AY D DV F V+ F +YG LS + LE +AG RV + S KKNP DF
Sbjct: 122 VAMVEKLIANGHAYVAADDDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G +TID EKMSKSLGNFFTIR ++E Y LR F + HYRS
Sbjct: 242 SCCAHSGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS+ L+ A + +Y +L C+ ++ V ++ F A+M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSVQ---------------VAGSEQYVEAFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T LA L + + +N L K A+RL+ LA VLGL+
Sbjct: 347 DDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAG----------VLGLLYQ 396
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
E LQ D D+V + I+ R A+ K + +D +R L A+ I L
Sbjct: 397 D-PEAFLQ--------GDANNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVL 447
Query: 550 MDSPVGTTWRPA 561
D+P GT WR A
Sbjct: 448 EDTPNGTMWRKA 459
>gi|94499488|ref|ZP_01306025.1| cysteinyl-tRNA synthetase [Bermanella marisrubri]
gi|94428242|gb|EAT13215.1| cysteinyl-tRNA synthetase [Oceanobacter sp. RED65]
Length = 460
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/485 (46%), Positives = 301/485 (62%), Gaps = 32/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+SR++E KP GK+GMYVCG+T YD H+GHARV V+FDV+ RYLRH G++V
Sbjct: 3 LQIYNTLSRQKEEFKPLQPGKIGMYVCGMTVYDFCHMGHARVMVSFDVIVRYLRHKGFDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y+RN TD+DDKII RA E GE L R + ++D L+ L P+ EPR + H+ I
Sbjct: 63 NYIRNITDIDDKIIQRAAENGEPFEQLVDRMVDAMNEDFAKLNILTPNSEPRATQHIDGI 122
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ +++ GFAY +GDVY+ V KF YG+LSG+ LE+ +G R+AV+ K++P DF
Sbjct: 123 IKMVETLIEKGFAYAAKNGDVYYRVRKFDGYGKLSGKILEELESGARIAVEEEKEDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWKSAK EP W+SPWG GRPGWHIECS MS LG++FDIHGGG DL FPHHENEIAQ
Sbjct: 183 VLWKSAKPEEPSWDSPWGQGRPGWHIECSVMSTCCLGNNFDIHGGGPDLKFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + ID EKMSKSLGNFFTIR ++E Y +R FL YRS
Sbjct: 243 SEAATGEHYANTWMHAGALRIDGEKMSKSLGNFFTIRDILEKYDAEVIRFFLSSVQYRSA 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A ++ +Y +H C+ + +++D +D++ DT F A+M
Sbjct: 303 INYSEDGLKDAEAKLDRLYNAIHGCDLS-AVIDE---QDAVVQDT-------RERFEAAM 351
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L D + IN KK+ LAAL + ++L L Y
Sbjct: 352 DDDFNTPKAIAVLFDLVNEIN--------KKEGAEKNPLAALLVELSSILGCLQSDPDNY 403
Query: 495 SEVLLQLREKALKRADLTEDQVLQ-RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L+R +D +Q +I++R A+K+K++ +D IR+DL A GI L DS
Sbjct: 404 -----------LQRGVTLDDAYIQGKIQERAQAKKDKDFALADKIREDLDAQGIILQDSR 452
Query: 554 VGTTW 558
GTTW
Sbjct: 453 EGTTW 457
>gi|85713337|ref|ZP_01044354.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
gi|85692839|gb|EAQ30820.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
Length = 460
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/487 (46%), Positives = 294/487 (60%), Gaps = 34/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NT++R++E P+ G+VGMYVCGVT YDL HIGHAR YV FDV+ RYLR +GY+V
Sbjct: 3 LTLFNTLTREKETFTPREAGRVGMYVCGVTTYDLCHIGHARTYVAFDVVVRYLRKIGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L++RY +E H+D L+ L P VEPRV+ HM I
Sbjct: 63 TYVRNITDLDDKIIKRAAENGEPFDALTQRYIDEMHRDFAALNLLEPDVEPRVTQHMDDI 122
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI ++ G+AY+ D GDV F V F +YG+LS + LE +AG RV V++ K +P DF
Sbjct: 123 IRMIESLVTQGYAYQADNGDVLFDVSTFDDYGRLSRQNLEQLQAGARVDVEASKLDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W+SPWG GRPGWHIECSAM+ A+LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 183 VLWKKAKAGEPSWDSPWGEGRPGWHIECSAMNKAHLGETFDIHGGGSDLTFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A ++++YW+H+G V +D KMSKSLGNFFTIR V+ Y +R FL+ +HYRS
Sbjct: 243 SCCANQTNYVNYWMHSGMVQVDDVKMSKSLGNFFTIRDVLNAYDAETVRYFLLSSHYRSQ 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIP--PDTVTSINKFHNDFLA 432
+NY+ LE A + +Y AL+ P PD + + N F
Sbjct: 303 LNYTQDNLEQAHAALERLY---------------TALRGLTPEQPDENLRL-PYWNQFTD 346
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M+DD + ++ L + ++ IN K + E A L + + VLGL+
Sbjct: 347 AMNDDFNAPEAMSVLFELVREIN--------KARDNDAERAAQLAHVLVELADVLGLLQQ 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
E LQ A L E + Q R AR K++ +D R L +GI L D
Sbjct: 399 S-PESFLQ--GGADDEVALIEALIAQ----RNKARAEKDWAAADEARDRLTEMGIVLEDG 451
Query: 553 PVGTTWR 559
GT WR
Sbjct: 452 ANGTQWR 458
>gi|390950398|ref|YP_006414157.1| cysteinyl-tRNA synthetase [Thiocystis violascens DSM 198]
gi|390426967|gb|AFL74032.1| cysteinyl-tRNA synthetase [Thiocystis violascens DSM 198]
Length = 462
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/488 (45%), Positives = 294/488 (60%), Gaps = 31/488 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E +P GKV MYVCG+T YD H+GHARV V FDV+YRYL+ LGY+V
Sbjct: 2 LQIHNTLTRQKETFQPIEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y+RN TD+DDKII RA E GE +L+ R+ + H+D L LPP+ EPR + HM I
Sbjct: 62 TYIRNITDIDDKIIRRAAENGEPFPALTERFIQAMHEDSETLGILPPTDEPRATAHMDDI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+DMI ++D GFAY D GDVY++V +FP+YG+LSG+ +D R+G RV + K++P DF
Sbjct: 122 LDMIQTLIDKGFAYVADNGDVYYAVSRFPDYGKLSGKNPQDLRSGARVEIGEAKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK EP W+SPWG GRPGWHIECSAMS LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKAAKPDEPAWDSPWGAGRPGWHIECSAMSTCALGNHFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A ++ W+HNGFV ++ EKMSKSLGNFFT+R++++ Y P +R F++ + YRSP
Sbjct: 242 SEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQRYRPEEIRYFILTSQYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY L++A + Y L +P F F A+M
Sbjct: 302 LNYDDEHLQNARSALTRFYTALR----------------GLPSVEPVGGETFRERFHAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA L D + IN + +A LE AAL +R + VLG++
Sbjct: 346 DDDFNTPEALAVLFDLAREIN--------RVRADDLERAAALGAELRRMGEVLGILQDDA 397
Query: 495 SEVLL-QLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L L AD+ + L A KN + ++D IR L GI L D+P
Sbjct: 398 ERYLRGDATAGGLANADIDD---LIAQRIAARAAKN--WAEADRIRAVLTEAGIVLEDNP 452
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 453 QGTIWRRA 460
>gi|409095424|ref|ZP_11215448.1| cysteinyl-tRNA ligase [Thermococcus zilligii AN1]
Length = 476
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/482 (43%), Positives = 287/482 (59%), Gaps = 14/482 (2%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT +R++E +P EG+V MYVCG T YD +HIGHAR Y+ FDV+ RYL H GY V
Sbjct: 5 IYNTQTRQKEEFRPLREGEVRMYVCGPTVYDYTHIGHARTYIAFDVVRRYLEHRGYTVLM 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTD+DDKII RANE GEDP L+ ++ F +DM L P + PRV++H+ II+
Sbjct: 65 VMNFTDIDDKIIKRANETGEDPKELAEKFLRYFLEDMAALKVKPADIYPRVTEHVADIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++ + G+AY VYF V +F +YG+LSG K+ED G RV KKNP DF LW
Sbjct: 125 FIRKLQEKGYAYEGSDGVYFEVRRFKDYGKLSGIKVEDLVKGARVEPGEGKKNPEDFVLW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K AK GEP W SPWG GRPGWHIECS MS YLG SFDIHGGG DL+FPHHENEIAQ+ A
Sbjct: 185 KKAKPGEPKWSSPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQTEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ + YW+H GF+ ++ EKMSKSLGNF TIR+ ++ Y P +RLF++ HYRSP++Y
Sbjct: 245 CTGHEWVRYWMHTGFLMVNGEKMSKSLGNFITIREALKRYDPEVIRLFVLQKHYRSPLDY 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
+ +E A + +Y TL + A+ + + + + +I + F +M DD
Sbjct: 305 TEEGMEHAKNNLEKLYNTLENIRVAMERAEISFRWEKHEFEAYEAIREARKKFYEAMDDD 364
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T L A+ + +N L + K+++ L + + V V G+ + E
Sbjct: 365 FNTAEALKAVFEASNAVNRYLTQVETPKESI----LRKAWEFFKVVGEVFGIFEDYFKE- 419
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
++A E+ + +E R RK K + +D IR L +GI L D+P GT
Sbjct: 420 ---------QKAGEEEELIKLLVEVRAQLRKEKNFALADKIRTQLRELGIQLEDTPQGTV 470
Query: 558 WR 559
W+
Sbjct: 471 WK 472
>gi|134298071|ref|YP_001111567.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
gi|187629810|sp|A4J0Y9.1|SYC_DESRM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|134050771|gb|ABO48742.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
Length = 486
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/482 (45%), Positives = 297/482 (61%), Gaps = 1/482 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R +E P+ +G V MYVCG T Y+ H+G+AR V FD + RY + GY+V Y
Sbjct: 3 IYNTLARAKEEFIPRDKGHVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYFLYKGYKVDY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII RA E DP+ L+++Y +EF D L+ + P+VS+H+ IID
Sbjct: 63 VQNFTDVDDKIINRAAEEKIDPLELAQKYIQEFFVDADALNVMRADTHPKVSEHIEEIID 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I ++ D G AY VDGDVYF+V F EYG+LSGR LED +AG RV VD RKK+P DFALW
Sbjct: 123 LIKRLEDQGHAYVVDGDVYFAVRSFAEYGKLSGRSLEDMQAGARVEVDPRKKDPMDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK GEP W+SPWG GRPGWHIECSAM+ YLG+ FDIHGGG DL+FPHHENEIAQS A
Sbjct: 183 KAAKPGEPSWDSPWGSGRPGWHIECSAMAEKYLGNGFDIHGGGFDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
AC YW+HNGF+TI+ EKMSKSLGNFF +R+++ + P +R +L+ THYRSP+++
Sbjct: 243 ACKAPFARYWMHNGFITINQEKMSKSLGNFFLVREILAKFPPDVVRWYLLSTHYRSPLDF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
+L + + + I L +A+ L + ++ + +F +M DD
Sbjct: 303 DDEKLVMSGKGLERIKTALRLLYEAMDLPVYEGEDIQGAENFEETLQRIRLEFEKAMDDD 362
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T + ++ D K +N + K + L I++ VLG++
Sbjct: 363 FNTALAISYFFDLAKEVNIYVGKLNSKVTLEMRKILDQAHTLIKDFNRVLGILKEDKMTG 422
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
L L E A LTE V I+ R AR K++ +DAIR L +G+ L D+P G
Sbjct: 423 KL-LIEMAGADDTLTEGLVQLIIKIRQEARSKKDWSTADAIRDGLKELGVVLEDTPQGVR 481
Query: 558 WR 559
W+
Sbjct: 482 WK 483
>gi|226735064|sp|B8CRG0.1|SYC_SHEPW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212557514|gb|ACJ29968.1| Cysteinyl-tRNA synthetase [Shewanella piezotolerans WP3]
Length = 459
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/488 (45%), Positives = 295/488 (60%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT++R++E P GK+GMYVCGVT YDL HIGH R +V+FD++ RYLR+ GYEV
Sbjct: 2 LKLYNTLTRQKEQFVPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TDVDDKII RANE E SL+ R E H+D L+ P EPR + HMP I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCDSLTERLIGEMHRDFDSLNMARPDFEPRATLHMPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+M+ +++ AY +GDV FSV FPEYG+LSG+ LE +AG RV V+ K++P DF
Sbjct: 122 IEMVEKLIAREHAYVAANGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDAKRDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W+SPWGPGRPGWHIECSAM++ +LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +D EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTKYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLNHYDAATVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + IY L D + + D+ P + F F +M
Sbjct: 302 LNYSEENLKQAKSGLERIYTALKDLDLTV---------DAAPAEA------FIAQFKRAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L + ++ IN L T ++ +AL ++ + VLG++
Sbjct: 347 DDDFNTPEAYSVLFEMVREINRLKLT--------DMQQASALGVALKQLADVLGILGQDV 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ + ++D+V + I +R AR K++ +D R L A+G+ L D
Sbjct: 399 DTFF---------KGEGSDDEVAEIEALIVERNRARTEKDWPAADVARDGLNALGVILED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPEGTTWR 457
>gi|343513226|ref|ZP_08750335.1| cysteinyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
gi|342793531|gb|EGU29323.1| cysteinyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
Length = 460
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/488 (45%), Positives = 301/488 (61%), Gaps = 35/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GK+GMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RANE GE SL+ R E H D L+ P +EPR ++ +P I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDIEPRATEFIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY +GDV F V KF EYG+LS + L+ +AG RV ++S K++P DF
Sbjct: 122 IALVEKLIERGFAYVASNGDVMFEVSKFDEYGKLSKQDLDQLQAGARVDIESAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM++A LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHNTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L AA D ++ F +M
Sbjct: 302 LNYSEENLNQARASLERLYTSL----RGLDLSVEAAGGD-----------EYQTRFNDAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L +A +E +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KAENIEQASALGVVMRQMAEVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+L Q E LK +D+V + I+ R +R +K++ +D R L +GI L D
Sbjct: 393 --ILHQDAEAFLKGDAGNDDEVAEIEALIKLRNDSRASKDWANADLARDKLNEMGIELED 450
Query: 552 SPVGTTWR 559
GTTWR
Sbjct: 451 GAEGTTWR 458
>gi|337284525|ref|YP_004623999.1| cysteinyl-tRNA synthetase [Pyrococcus yayanosii CH1]
gi|334900459|gb|AEH24727.1| cysteinyl-tRNA synthetase [Pyrococcus yayanosii CH1]
Length = 476
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/489 (43%), Positives = 289/489 (59%), Gaps = 28/489 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+++++E KP +G+V MYVCG T YD H+GHAR Y+ FDV+ RYL H GY V
Sbjct: 5 VYNTLTKRKEEFKPLRKGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGYTVLM 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTD+DDKII RA E GEDP L+ ++ F +DM L P V PRV++H+ II
Sbjct: 65 VMNFTDIDDKIIKRAQETGEDPKELAEKFIRVFLEDMAALKVKPADVYPRVTEHVNDIIA 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++ + G+AY VYF V KF EYG+LSG K+E+ + G RV KKNP DFALW
Sbjct: 125 FIERLEEKGYAYEGSDGVYFEVSKFKEYGKLSGIKVEELKKGARVEPGEGKKNPEDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K AK GEP WESPWG GRPGWHIECSAMS+ YLG SFDIHGGG DL+FPHHENEIAQS A
Sbjct: 185 KKAKPGEPKWESPWGEGRPGWHIECSAMSSKYLGESFDIHGGGNDLIFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ + YW+H GFV + EKMSKSLGNF T+R++++ Y P +R F++ HYRSP++Y
Sbjct: 245 CFGHEWVRYWLHTGFVMVKGEKMSKSLGNFVTVRELLQRYSPEVIRFFVLQKHYRSPLDY 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
+ L A + +Y TL + A+ ++ A + I + F +M DD
Sbjct: 305 TEEGLMHAKNNLERLYNTLENIRVAMERVELAYTWGEEEFELYEVIKEGRRKFYEAMDDD 364
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS------ 491
+T L A+ + +N L + K+++ L + + V V GL
Sbjct: 365 FNTAEALKAVFEVSNAVNRYLTKVERPKESV----LRKAWEFFKAVSEVFGLFEDYFKEQ 420
Query: 492 -TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
TG E L++L ++ R RK K Y+ +D IR++L +GI L
Sbjct: 421 KTGNEEALIKL-----------------LVDVRAQLRKEKRYDLADKIREELRKLGIQLE 463
Query: 551 DSPVGTTWR 559
D+P GT W+
Sbjct: 464 DTPQGTVWK 472
>gi|170727456|ref|YP_001761482.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
gi|229558789|sp|B1KLU0.1|SYC_SHEWM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169812803|gb|ACA87387.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
Length = 459
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/485 (45%), Positives = 294/485 (60%), Gaps = 30/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN+++R++E KP GKVGMYVCG+T YDL HIGH R +V FD++ RYLR+ GY+V
Sbjct: 2 LKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVAFDMIVRYLRYSGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
++RN TDVDDKII RA E E SL+ R E H+D L+ P EPR + HM I
Sbjct: 62 NFLRNITDVDDKIIKRAAENKESCDSLTERLIGEMHKDFDSLNMKRPDFEPRATLHMAEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+M+ ++++ AY +GDV FSV FPEYG+LSG+ LE +AG RV V+ K++P DF
Sbjct: 122 IEMVEKLIEKEHAYVSSNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDSKRDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H G V +D EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHNTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLAHYDAATIRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L D + L++ AAA F + F +M
Sbjct: 302 LNYSEDNLKQAKSALARLYTALKDLD--LTVEPAAA-------------ENFVSKFKQAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ +N L + L +AL ++ + VLG++
Sbjct: 347 DDDFNTPEAYSVLFDMVREVNRL--------KVTDLAQASALAVRLKELAGVLGILEQDV 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ A++ E + L I +R AR K++ +D R L A+G+ L D P
Sbjct: 399 DSFF----KGESNDAEVAEVEAL--IAERNRARAEKDWPAADIARDGLNALGVILEDGPE 452
Query: 555 GTTWR 559
GTTWR
Sbjct: 453 GTTWR 457
>gi|406903893|gb|EKD45834.1| hypothetical protein ACD_69C00115G0004 [uncultured bacterium]
Length = 468
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/484 (45%), Positives = 301/484 (62%), Gaps = 34/484 (7%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+++++EL+KP K+G+YVCG+T YD HIGH R+++ FDVL RYLR +GY+V Y
Sbjct: 4 IYNTLTKRKELLKPIDPPKIGLYVCGLTVYDDCHIGHGRLFIWFDVLTRYLRSVGYQVSY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RA EL D L+++ H D L +PP EPRV+DH+P IID
Sbjct: 64 VRNITDIDDKIIKRAQELNIDYKELTKQVIASMHADEKLLGNIPPDFEPRVTDHIPEIID 123
Query: 198 MITQILDNGFAYRVDG-DVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++D FAY G DVY+SV KF +YG+LS + + G RV V K++P DF L
Sbjct: 124 MIQTLIDKNFAYPTKGGDVYYSVAKFKKYGELSHKDIGGLLLGIRVEVSEDKQDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK EPFW SPWG GRPGWHIECSAM+ YLG +FDIHGGG DL FPHH+NE+AQS
Sbjct: 184 WKAAKSKEPFWPSPWGNGRPGWHIECSAMAKKYLGKTFDIHGGGSDLQFPHHQNELAQSE 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA + ++YW+H GFV + EKMSKSLGNFFT+++V++ Y+P LR F++ +HYRS IN
Sbjct: 244 AANDCPFVNYWMHIGFVQSNQEKMSKSLGNFFTLKEVLKKYNPEVLRYFVVISHYRSQIN 303
Query: 377 YSVVQLESASERI--FYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
YS L++A + FYI EK + T + N+F+ +F A+M
Sbjct: 304 YSQENLDNAQSALQRFYISMRSLPTEKNI---------------TFETDNQFYKNFHAAM 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L D + IN L + Q ++ ++ AL K + G+
Sbjct: 349 QDDFNTPKAIAILFDLAREINQL----RDSSQELKAQNQCALLKHL------------GW 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
S +LQ + + + +++ I R AR+NK + ++D IR +L +GI L D+
Sbjct: 393 SLGILQENPETFLKFGVNIEKIETLIAARNQARQNKNWHEADKIRAELTTMGITLEDTGA 452
Query: 555 GTTW 558
GTTW
Sbjct: 453 GTTW 456
>gi|406879047|gb|EKD27781.1| hypothetical protein ACD_79C00582G0003 [uncultured bacterium]
Length = 492
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/500 (42%), Positives = 310/500 (62%), Gaps = 29/500 (5%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
+L LYNTM++ +E +P G+V MYVCG+T YD +H+GHAR Y +FDVL+R+L++LGY
Sbjct: 2 ELKLYNTMTKTKEKFEPLKSGEVKMYVCGMTVYDNAHLGHARAYTSFDVLFRFLQYLGYR 61
Query: 135 VCYVRNFTDVDDKIIARANELGEDPIS--------LSRRYCEEFHQDMVDLHCLPPSVEP 186
V YVRN TD+DDKII RA E +D + LS R+ +EF DM L+ LP S+EP
Sbjct: 62 VTYVRNVTDIDDKIINRAREQIQDFSTNPNKSCEILSTRFYKEFLDDMKALNLLPASIEP 121
Query: 187 RVSDHMPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDS 246
+ + H+ IIDMI +++ G+AY VDG+VYF++ KF YG+LSGR +ED R+ D+
Sbjct: 122 KATMHIKEIIDMIEGLINKGYAYNVDGNVYFNITKFLNYGKLSGRNIEDTELHSRIDQDA 181
Query: 247 RKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFP 306
KKNP DFALWK +P+WESP+G GRPGWHIECSAMS YLG FDIHGGG DL+FP
Sbjct: 182 NKKNPLDFALWKKHVNDDPYWESPFGKGRPGWHIECSAMSMKYLGEEFDIHGGGQDLIFP 241
Query: 307 HHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFL 366
HHENEIAQS A YWIHNGF+T++ EKMSKSL NF TIR++ +Y+PL ++ +L
Sbjct: 242 HHENEIAQSAAYSGKGFARYWIHNGFITVNHEKMSKSLKNFKTIRELTAVYNPLNIKFYL 301
Query: 367 IGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKF 426
+ THYRSP++++ +++ +E +F I TL +A +L+ ++ ++ + K
Sbjct: 302 LSTHYRSPLDFNDNLIKNCAEGLFKIENTL---SRAKLVLEESS--------SIDNTKKL 350
Query: 427 HNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMR--------LESLAALEK 478
DF+ +M DD++T L+ + + +N +L +K+A++ + + LE
Sbjct: 351 PADFIDAMCDDINTPKALSVIFNECTGLNKILEGNLPEKEAIKEKYSLIINMLQILGLEP 410
Query: 479 TIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAI 538
I + V G +E ++ L + LK L EDQ+ + + R +A+ K + +D I
Sbjct: 411 EIEKMHVVPKKKWAGANEAIIALMK--LKPQKLNEDQISRLVSARGMAKIEKNFTLADEI 468
Query: 539 RKDLAAVGIALMDSPVGTTW 558
R L + I + D W
Sbjct: 469 RNYLKTLNIEIRDKADACHW 488
>gi|262369707|ref|ZP_06063035.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
gi|262315775|gb|EEY96814.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
Length = 473
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/488 (46%), Positives = 309/488 (63%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+VEG + MYVCG+T YD HIGHARV V FD + R+LR G+ V Y
Sbjct: 6 LYNSEQRKKVEFVPRVEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWSVKY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L+ R+ + ++D +L CL P PR +D++ +
Sbjct: 66 VRNITDIDDKIIKRANENGESITQLTDRFIQAMNEDAENLGCLHPDEAPRATDYIDQMQS 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V+KF +YG+LSGRKLED +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVEKGTAYPSANGDVYFQVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK+ EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKDNEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VM+ +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMDKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++A L +++ + +F+ ++M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFKAYQQAYGDTQVDTLDETL-------LERFN----SAM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N R K+Q + E A T+R++ +LGL+
Sbjct: 355 RDDFNTAEAIAVLFEVNKELN-----RAVKEQ--QAEQAAIYYATLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L + ++AL L+E+Q+ I+ R A+K KE+ K+D IR+ L G+ L D+
Sbjct: 408 EEFLKSDIGQEALA---LSEEQIEDLIQQRQDAKKAKEFAKADEIRQSLLDQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTIWRRA 472
>gi|342904069|ref|ZP_08725871.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|342904629|ref|ZP_08726428.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|341953050|gb|EGT79564.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|341954078|gb|EGT80572.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
Length = 459
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/488 (45%), Positives = 292/488 (59%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +++ A A F F SM
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQS-----AVAFGGE----------NFVETFRESM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + IN L + +E L +R + +LG
Sbjct: 347 DDDFNTPNALSVLFEMAREINKL--------KTEDIEKANGLAARLRELGAILG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LLQ + +A +D+V + I+ R AR K++ +DA R +L A+GI L D
Sbjct: 393 ---LLQQEPEKFLQAGSNDDEVAKIEALIKQRNEARVAKDWSAADAARNELTAMGIVLED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPNGTTWR 457
>gi|343514072|ref|ZP_08751154.1| cysteinyl-tRNA synthetase [Vibrio sp. N418]
gi|342800738|gb|EGU36249.1| cysteinyl-tRNA synthetase [Vibrio sp. N418]
Length = 460
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/488 (45%), Positives = 301/488 (61%), Gaps = 35/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GK+GMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RANE GE SL+ R E H D L+ P +EPR ++ +P I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDIEPRATEFIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY +GDV F V KF EYG+LS + L+ +AG RV ++S K++P DF
Sbjct: 122 IALVEKLIERGFAYVASNGDVMFEVSKFDEYGKLSKQDLDQLQAGARVDIESAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM++A LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHNTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L AA D ++ F +M
Sbjct: 302 LNYSEENLNQARASLERLYTSL----RGLDLSVEAAGGD-----------EYQARFNDAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L +A +E +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDIAREINRL--------KAENIEQASALGVVMRQMAEVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+L Q E LK +D+V + I+ R +R +K++ +D R L +GI L D
Sbjct: 393 --ILHQDAEAFLKGDAGNDDEVAEIEALIKLRNDSRASKDWANADLARDKLNEMGIELED 450
Query: 552 SPVGTTWR 559
GTTWR
Sbjct: 451 GAEGTTWR 458
>gi|350564143|ref|ZP_08932962.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
gi|349778143|gb|EGZ32502.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
Length = 456
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/485 (44%), Positives = 292/485 (60%), Gaps = 34/485 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT +R++E KP V GKVG+YVCGVT YD HIGHARV V FD + R++R G EV
Sbjct: 3 LQIYNTETRQKETFKPIVPGKVGIYVCGVTVYDYCHIGHARVMVVFDTVVRHMRARGLEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E SL+ R+ + H+D L+ L P +EP+ +D +P I
Sbjct: 63 KYVRNITDIDDKIINRAFENQESVQSLTERFIKAMHEDETALNILRPDIEPKATDFIPEI 122
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
++ +++ G AY +GDVYF V F YG+LSG+K ED AG RV ++ K++P DF
Sbjct: 123 QQLVNTLIEKGHAYAAPNGDVYFKVKSFESYGRLSGKKQEDLEAGARVEINPNKQDPMDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK++KE EP W+S WG GRPGWHIECSAMS + +G DIHGGGMDL FPHHENEIAQ
Sbjct: 183 VLWKASKENEPAWDSAWGQGRPGWHIECSAMSGSCIGERLDIHGGGMDLQFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A +++ W+H GFV +D+EKMSKSL NFFTIR+V++ YHP +R FL+ +HYRSP
Sbjct: 243 SECAHGEHYVNTWMHVGFVRVDNEKMSKSLNNFFTIREVLKDYHPEVIRYFLLSSHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY++ L+ A + +Y L E P V F F +M
Sbjct: 303 LNYTIENLDIAKTNLARLYTALQAAE----------------PGLVAENTDFEAKFNEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + +K +N + L AL +++ N L +L +
Sbjct: 347 DDDFNTPQAMAVLFELVKEVN-----------KTQQPGLVALLQSLANRLGLLTETPQSF 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ + + LT+D + I +RT AR +K + +SD IR +L A G+ L+D
Sbjct: 396 ------FKSQVGQTDGLTDDAIEALIVERTQARADKNWARSDEIRDELLAKGVELLDGKE 449
Query: 555 GTTWR 559
GT+WR
Sbjct: 450 GTSWR 454
>gi|413958323|ref|ZP_11397562.1| cysteinyl-tRNA ligase [Burkholderia sp. SJ98]
gi|413940903|gb|EKS72863.1| cysteinyl-tRNA ligase [Burkholderia sp. SJ98]
Length = 465
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/489 (44%), Positives = 294/489 (60%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R ++ P G+V MYVCG+T YD H+GHAR++V FD++ R+LR +GY+V
Sbjct: 4 LRIYNTLARDKQTFTPLRAGEVRMYVCGITVYDYCHVGHARMFVVFDIVQRWLREIGYKV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E SL++R+ E ++DM L +EPR ++ +P +
Sbjct: 64 TYVRNITDIDDKIIRRAVENNESIKSLTQRFIEAMYEDMDALGVARADIEPRATEFVPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI + NG+AY+ DGDV +SV KF +YG+LSG+ +ED RAGERV + K++P DF
Sbjct: 124 LGMIDALHANGYAYQAKDGDVNYSVRKFTDYGKLSGKSIEDLRAGERVTANDAKEDPLDF 183
Query: 255 ALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK +K GEP W S WG GRPGWHIECSAM LG FDIHGGGMDL FPHHENE
Sbjct: 184 VLWKQSKAGEPEDTGWNSKWGRGRPGWHIECSAMGCTLLGEQFDIHGGGMDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A ++YW+HNGFV IDSEKMSKSLGNFFTIR+V+E + +R F+ HY
Sbjct: 244 IAQSEGATGKQFVNYWMHNGFVQIDSEKMSKSLGNFFTIREVLEKFDAEVVRFFIARAHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RSP+NYS V ++ A + +Y L D E LD + F
Sbjct: 304 RSPLNYSDVHIDDAKNALTRLYTALKDVEPDNQQLDWSEAN--------------AQRFQ 349
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
++M+DD +T V ++ L D +N TR AAL + ++ + VLGL+
Sbjct: 350 SAMNDDFNTPVAVSVLFDLASEVN---RTRD-----------AALARQLKGLAGVLGLLQ 395
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LQ A L+ ++ +I +R A++ K Y ++D IR L GIAL D
Sbjct: 396 R-EPRAFLQRASGAGSSEGLSPQEIEAKIAERIAAKRAKNYAEADRIRAALLEAGIALED 454
Query: 552 SPVGTT-WR 559
P G+T WR
Sbjct: 455 KPGGSTEWR 463
>gi|365835886|ref|ZP_09377294.1| cysteine--tRNA ligase [Hafnia alvei ATCC 51873]
gi|364565006|gb|EHM42743.1| cysteine--tRNA ligase [Hafnia alvei ATCC 51873]
Length = 469
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/486 (46%), Positives = 297/486 (61%), Gaps = 30/486 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP G+VGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY +
Sbjct: 10 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYNL 69
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE L+ R E H+D L+ P +EPR + H+P I
Sbjct: 70 KYVRNVTDVDDKIIKRALENGETCDQLTERMLAEMHKDFDSLNIARPDLEPRATHHIPEI 129
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ Q++ G AY +GDV F+VD P+YG LS + LE +AG RV + K+NP DF
Sbjct: 130 IEIVEQLITRGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEIADVKRNPMDF 189
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 190 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQ 249
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSLGNFFTIR V++ Y +R FL+ HYRS
Sbjct: 250 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLQHYDAETVRYFLMSGHYRSQ 309
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL+ + ++F + F +M
Sbjct: 310 LNYSEENLKQARSALERLY---------------TALRGTDSKAEPAGGDEFESRFREAM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D + +N L ++ + AL +R + +LGL+
Sbjct: 355 DDDFNTPEAYSALFDLAREVNRL--------KSEDMAQANALAAELRKLAKILGLLEQD- 405
Query: 495 SEVLLQLREKALKRADLTE-DQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
EV LQ +AD +E Q+ I+ R AR K++ +D+ R L A+GI L D P
Sbjct: 406 PEVFLQ----GGAQADDSEVAQIEALIKQRNDARAAKDWAMADSARDQLNALGIVLEDGP 461
Query: 554 VGTTWR 559
GTTWR
Sbjct: 462 QGTTWR 467
>gi|332158896|ref|YP_004424175.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
gi|331034359|gb|AEC52171.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
Length = 476
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/484 (44%), Positives = 296/484 (61%), Gaps = 14/484 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++++E KP EG+V MYVCG T YD H+GHAR Y+ FDV+ RYL H GY V
Sbjct: 3 LKVYNTLTKRKEEFKPIREGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGYTV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
V NFTD+DDKII RA E GEDP L+ ++ + F +DM L P + PRV++H+ I
Sbjct: 63 LMVMNFTDIDDKIIRRARETGEDPKELAEKFIKVFLEDMNALKVKPADIYPRVTEHIGDI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
ID I ++ + G+AY VYF V KF EYG+LSG K+E+ R G RV KKNP DFA
Sbjct: 123 IDFIKKLEEKGYAYEGKDGVYFEVQKFKEYGKLSGIKIEELRKGARVEPGEGKKNPEDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK AK GEP W+SPWG GRPGWHIECS MS+ YLG SFDIHGGG DL+FPHHENEIAQS
Sbjct: 183 LWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A + + YW+H GFV + EKMSKSLGNF T+R++++ Y P +R F++ HYRSP+
Sbjct: 243 EACFGHEWVRYWLHTGFVMVKGEKMSKSLGNFVTVRELLQRYSPEVIRFFVLQKHYRSPL 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
+YS L+ A + +Y TL + A+ + A D + +I F +M
Sbjct: 303 DYSEEGLQHAKNNLERLYNTLENIRIAMERAELAYTWDEDDYEVYEAIKNARKKFYEAMD 362
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T L A+ + IN L ++ K+A+ ++L + + V + G+ +
Sbjct: 363 DDFNTAEALKAVFEVSNAINKYLTEKERPKEAILRKAL----EFFKVVSEIFGIFEDYFK 418
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
E ++ E+ +K VL ++ R+ RK K ++ +D IR++L +GI L D
Sbjct: 419 EEKREIEEELIK--------VL--VDVRSQLRKEKRFDLADKIREELRRLGIQLEDRGQE 468
Query: 556 TTWR 559
T W+
Sbjct: 469 TVWK 472
>gi|88811742|ref|ZP_01126996.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
gi|88791133|gb|EAR22246.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
Length = 469
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/487 (45%), Positives = 304/487 (62%), Gaps = 27/487 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L++YN+++ ++E +P G+V MYVCG+T YD H+GHAR V FD + RYLR GY V
Sbjct: 2 LYIYNSLTNRKEPFRPIEPGRVRMYVCGMTVYDYCHLGHARAMVVFDTVVRYLRSAGYRV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA ELGE L+ R+ H D L CL P EPR + +M I
Sbjct: 62 DYVRNITDVDDKIIRRAAELGEPVNVLTERFIAAMHADTAALGCLLPDAEPRATAYMDAI 121
Query: 196 IDMITQILDNGFAYRV--DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPAD 253
+ +I ++LD G+AY+ +G +Y++V++F YG+LSG +LE RAG RV + K++ AD
Sbjct: 122 VALIQRLLDRGYAYQAVDEGSIYYAVERFEGYGRLSGERLEALRAGARVEPGAGKRDAAD 181
Query: 254 FALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIA 313
F LWK+AK GEP W +PWG GRPGWHIECSAM+ A LG FDIHGGG+DL FPHHENEIA
Sbjct: 182 FVLWKAAKPGEPSWPAPWGEGRPGWHIECSAMAGACLGQHFDIHGGGLDLKFPHHENEIA 241
Query: 314 QSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
QS AA ++++W+HNG + I+ EKMSKSLGNFFT+R+V+++Y +R FL+ +HYRS
Sbjct: 242 QSEAAWGGRYVNFWMHNGHIRINDEKMSKSLGNFFTVREVLQVYRAEEIRYFLLSSHYRS 301
Query: 374 PINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
P+NYS L+++ + +Y L D L +A+ P + F +
Sbjct: 302 PLNYSTSDLDNSRAALERLYLALRD----LPFTEAS-------PALAAP---YREAFRQA 347
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLES-LAALEKTIRNVLTVLGLMST 492
M DD +T + LA L D + IN ++ R ES AAL T+R + +LGL
Sbjct: 348 MDDDFNTPLALAVLFDLAREIN---------RRRDRFESQAAALAATLRELGGLLGLAQV 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
EV L+ + + ++V + +R +ARKN+++ +D IR +L A GIAL D+
Sbjct: 399 A-PEVFLKGGAGSSVAVGIASERVEALLAERALARKNRDFATADRIRDELQAQGIALEDT 457
Query: 553 PVGTTWR 559
P GT WR
Sbjct: 458 PQGTAWR 464
>gi|192361138|ref|YP_001982161.1| cysteinyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
gi|190687303|gb|ACE84981.1| cysteinyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
Length = 466
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/486 (45%), Positives = 300/486 (61%), Gaps = 26/486 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+SR++E KP GK+ MYVCG+T YD HIGHARV V FDV+ ++LR G++V
Sbjct: 3 LQIYNTLSRQKEEFKPLKPGKISMYVCGITVYDYCHIGHARVLVAFDVITKFLRSQGWDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE L++R+ + H+D L P +EPR + + I
Sbjct: 63 TYVRNITDIDDKIIKRANENGEQYTDLTKRFIDYMHEDEARLGIARPDIEPRATAFIDQI 122
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+M ++D G+AY +GDVY+ V +F +YG+L+ + +++ G R+ VD K++P DF
Sbjct: 123 INMNQALIDKGYAYPASNGDVYYRVTRFADYGKLTNKNVDELLVGARIEVDEIKEDPRDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W+SPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQ
Sbjct: 183 VLWKAAKAGEPAWKSPWGQGRPGWHIECSAMSKDCCGTTFDIHGGGPDLPFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +++YW+H G V +D EKMSKSLGNFFTIR V+E YHP +R L+ +HYRSP
Sbjct: 243 SEAANGCKYVNYWMHAGAVRVDGEKMSKSLGNFFTIRDVLEKYHPEVVRFLLVSSHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INY+ L A + Y L D SL P T + ++ F+A+M
Sbjct: 303 INYAEDNLVEARTGLERFYGALRDYADVESL-----------PLTELQASDYYRSFVAAM 351
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T V LA++ D ++ +N+ GK R + LA ++ + +LG++
Sbjct: 352 NDDFNTRVALASMYDLVRELNN-----AGKTDVERAQRLAG---ELKALGLILGILQEN- 402
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
V LQ A+ + V +RI+ A+K K Y ++D +RK LA GI + D+
Sbjct: 403 PRVFLQTGTSGQIAAEEVDRLVAERIQ----AKKEKNYARADEVRKQLADNGILIEDAKD 458
Query: 555 GTT-WR 559
GTT WR
Sbjct: 459 GTTQWR 464
>gi|442320001|ref|YP_007360022.1| cysteinyl-tRNA synthetase [Myxococcus stipitatus DSM 14675]
gi|441487643|gb|AGC44338.1| cysteinyl-tRNA synthetase [Myxococcus stipitatus DSM 14675]
Length = 492
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/484 (46%), Positives = 302/484 (62%), Gaps = 6/484 (1%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
L+NTMS ++EL++P V G VG+YVCG T Y HIG+AR + +FDV+ RYLR+ GY V Y
Sbjct: 11 LFNTMSMQKELLEPAVPGCVGVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRYRGYTVRY 70
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTDVDDKII A+E GE P++L+ RY E F +D LH + P V P+VS+H+P I+
Sbjct: 71 VRNFTDVDDKIIKAAHETGEAPVALASRYVEYFREDAKALHMVEPDVAPKVSEHLPEIVR 130
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I ++D GFAY GDVYFSV +Y +LS R L+D GERV +K+ P DFALW
Sbjct: 131 IIQTLVDKGFAYESQGDVYFSVRADKDYAKLSKRNLDDLSVGERVQPGDQKREPLDFALW 190
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK GEP WESPWG GRPGWHIECSAMS YLG +FDIHGG +DL+FPHHENEIAQS +
Sbjct: 191 KAAKPGEPSWESPWGLGRPGWHIECSAMSEKYLGETFDIHGGALDLIFPHHENEIAQSES 250
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A YW+H GF+ ++ KMSKSLGN +R +E ALR F + THYR P+++
Sbjct: 251 AHGKDLAKYWMHCGFLDLEGAKMSKSLGNVVRLRDALEKVDAEALRFFFLSTHYRHPLSF 310
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L A R+ Y Y+TL ++ L+ D A P ++F +F +M DD
Sbjct: 311 SDKALADAEARMEYFYETLRKVDERLAGKDFGAGPVHGEP------HRFLGEFECAMDDD 364
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
++ L ALS +N+L K + + +L AL +R V VLGL
Sbjct: 365 FNSAGALGALSGLFGMMNELTDKPPVKDKPLVGRTLLALRDDVRKVSGVLGLFEDDAGAW 424
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
LL+ RE+A++ + +V + + +RT AR K++ +D +R L G+ +MD+ GT+
Sbjct: 425 LLRRRERAVRERGIDVAEVERLLSERTAARAAKDFAAADRVRATLKEKGVEIMDTAGGTS 484
Query: 558 WRPA 561
W+ A
Sbjct: 485 WKVA 488
>gi|421617568|ref|ZP_16058556.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri KOS6]
gi|409780556|gb|EKN60185.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri KOS6]
Length = 461
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/487 (46%), Positives = 286/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E +P KV MYVCG+T YD HIGHARV V FDV+ R+LRH GY+V
Sbjct: 3 LSIYNTLTKSKEAFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVITRWLRHRGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA+E GE +L R H+D L+ L P +EPR +DH+ +
Sbjct: 63 TYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDEARLNVLRPDLEPRATDHIAGM 122
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++ GFAY +GDVY+ V KF YG+LS RK+ED + G R+ VD K++P DF
Sbjct: 123 HAMIQTLIGKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKEDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W+SPWG GRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 183 VLWKGAKPGEPSWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 243 SEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F A+M
Sbjct: 303 INYSEESLKEAKGALERFYNGLK----------------GLPEAQAAGGEAFVERFGAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L + ++ +N L + LAA K + VL VL L +
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLRES-----DVPAAAGLAARLKQLAGVLGVLQLEPEAF 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D E + L I R AR K + +SD IR LAA+G+ L D
Sbjct: 402 ------LQAGAAGKVDAAEVEAL--IAARLTARVEKNWAESDRIRDQLAAMGVVLEDGKG 453
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 454 GTTWRLA 460
>gi|160872079|ref|ZP_02062211.1| cysteinyl-tRNA synthetase [Rickettsiella grylli]
gi|159120878|gb|EDP46216.1| cysteinyl-tRNA synthetase [Rickettsiella grylli]
Length = 466
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/493 (45%), Positives = 301/493 (61%), Gaps = 39/493 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++K+E KP + KVGMYVCG+T YD HIGHARV V FDV+ RYL+ GY+V
Sbjct: 2 LKIYNTLTQKKEAFKPMIAKKVGMYVCGMTVYDFCHIGHARVVVVFDVILRYLKMQGYQV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y+RN TD+DDKII RA E E P L++R + H+D L+ LPP+ EP+ +D + +I
Sbjct: 62 NYIRNITDIDDKIIKRAQENNESPFELTQRMIKAMHEDFNRLNTLPPNAEPKATDAIVYI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I +I +++D +AYR + GD+ F V KF YG L+ + ++ R G RVAVD KK+P DF
Sbjct: 122 IALIQRLVDKAYAYRSENGDICFDVKKFKTYGDLAHQNVQKLRRGLRVAVDITKKDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP WESPWGPGRPGWHIECSAMS A LG FDIHGGG+DLVFPHH+NEIAQ
Sbjct: 182 VLWKKAKSGEPSWESPWGPGRPGWHIECSAMSMAALGEHFDIHGGGLDLVFPHHQNEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S + ++ WIH GFV ID +KMSKSLGNFFT+R V++ Y +R FLI +HYRSP
Sbjct: 242 SEGVTDKKFVNTWIHVGFVQIDRQKMSKSLGNFFTLRDVLKQYPAEVVRYFLISSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV--TSINKFHNDFLA 432
I YS+ L++A + +Y +L L P V S ++ F
Sbjct: 302 IQYSLENLQAAQAALQRLYTSLR------------GLVGKGPQKFVLEESSKEYQEKFEH 349
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
+M+DD +T LA L + + IN L T + ++ A L+ LA+L LG
Sbjct: 350 AMNDDFNTPDALAILFELARRINRLRETNSKHAQRDANCLQYLASL----------LG-- 397
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVG 546
+L Q E+ LK + ++++I R AR K ++++D IR +L A+
Sbjct: 398 ------ILQQEPEQFLKLNQEKDPHLVEKINGLMNARNHARAAKNWQEADRIRDELLALN 451
Query: 547 IALMDSPVGTTWR 559
I L D+ GT WR
Sbjct: 452 IVLEDTTTGTQWR 464
>gi|127513439|ref|YP_001094636.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
gi|187631636|sp|A3QFX9.1|SYC_SHELP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|126638734|gb|ABO24377.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
Length = 459
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/488 (45%), Positives = 297/488 (60%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN+++R++E KP GKVGMYVCGVT YDL HIGH R +V FD++ RYLR++GY+V
Sbjct: 2 LKLYNSLTRQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVAFDMIVRYLRYIGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TDVDDKII RA E GE +L+ R +E + D L+ P EPR + HMP I
Sbjct: 62 NFHRNITDVDDKIIKRATENGESCDALTERLTQEMYHDFDALNMKRPDFEPRATQHMPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+M+ ++L+ AY D GDV FSV FPEYG+LSG+ L+ +AG RV VD K++P DF
Sbjct: 122 IEMVERLLERDHAYIADNGDVLFSVASFPEYGRLSGQNLDQLQAGARVEVDENKRDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W+SPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +D EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLAHYDASTVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L K L L AA +++ F +M
Sbjct: 302 LNYSEDNLKQAKAALERLYTAL----KGLDLSVEAA-----------PASEYVAKFKEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + IN L + L + +AL +++ + VLG
Sbjct: 347 DDDFNTPEAYSVLFDMAREINRL--------KVDDLAAASALGVSMKQLGDVLG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+L+ + + ++D+V Q I +R AR K++ +D R L A+G+ L D
Sbjct: 393 ---ILEQDVDGFFKGEGSDDEVAQIEALIAERNRARTEKDWAAADVARDGLNALGVILED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPEGTTWR 457
>gi|222530216|ref|YP_002574098.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|254765173|sp|B9MMM6.1|SYC_ANATD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|222457063|gb|ACM61325.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 465
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/482 (43%), Positives = 303/482 (62%), Gaps = 28/482 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++ +E +P EGKV MYVCG T YD HIG+AR + FD L RY + GYEV Y
Sbjct: 3 LYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEVIY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTDV+DK+I RAN+ G L+ R+ +E+++D L+ + PR ++ + +I
Sbjct: 63 IQNFTDVEDKMINRANKEGITVFELAERFIQEYYKDADRLNVKRATKNPRATEEIEDMIA 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++D G+AY VDGDVYF KF EYG+LS + +E+ AG RV + +K++P DFALW
Sbjct: 123 LIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W SPWG GRPGWHIECS M+ YLG + DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A +W+HNG+V I++EKMSKSLGNFFT+R+++E YHP ALRLF++ HYR P+N+
Sbjct: 243 ATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPLNF 302
Query: 378 S---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
S + Q E A +RI+ Y+ L L+ AA +I + F+ +M
Sbjct: 303 SIDLIEQAEVALKRIYTCYENLE------FLIQNAASSSENDDKLKAAIEELKAKFIDAM 356
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DDL+T L + ++ IN ++ E+L + T++ + ++LG++ Y
Sbjct: 357 EDDLNTAEATGYLFEMVREINTYANS-------CSKETLTFAKDTLKELCSILGILEQ-Y 408
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
S +E+A+ + Q+L+ +E R ARK K + ++D IR +L ++G ++D+P
Sbjct: 409 S-----AKEEAIPQ------QILELVEKRNQARKAKNFAEADRIRDELKSLGYIVLDTPQ 457
Query: 555 GT 556
GT
Sbjct: 458 GT 459
>gi|359440396|ref|ZP_09230316.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
gi|359456073|ref|ZP_09245267.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20495]
gi|392534096|ref|ZP_10281233.1| cysteinyl-tRNA ligase [Pseudoalteromonas arctica A 37-1-2]
gi|358037709|dbj|GAA66565.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
gi|358046880|dbj|GAA81516.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20495]
Length = 459
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/485 (46%), Positives = 294/485 (60%), Gaps = 30/485 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E KP VEGK+ MYVCG+T YD HIGHAR +V FDV+ RYLRH+GY++ Y
Sbjct: 4 IYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDLKY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L+ R + H+D L+ L P +EP V+ HM II
Sbjct: 64 VRNITDIDDKIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEIIV 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
M+ ++++ G AY DGDV F V F +YG LS + L ++G RV V K +P DF L
Sbjct: 124 MVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK GEP W SPWG GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHENEIAQSC
Sbjct: 184 WKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQSC 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A N +++ WIH G V ++ EKMSKSL NFFT+R+V++ Y P ++R FLI HYRS +N
Sbjct: 244 CANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDPESVRYFLISGHYRSQLN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L+ A + IY L D E P + N+F F +M+D
Sbjct: 304 YSQENLDQARSSLERIYTALRDVE---------------PVECDLEGNEFVAKFRKAMND 348
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T L L + K +N R + A++ LA + ++I NVL V + E
Sbjct: 349 DFNTPEALPVLFELAKELN-----RVKESDAVQAGQLAFILRSIGNVLGV----AQQAPE 399
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
LQ + + A + E +++R E AR +K + +D R L A+G+ L DS T
Sbjct: 400 AFLQGGQDDDEVATI-EALIVKRNE----ARASKNWAAADEARDALNALGVILEDSAGKT 454
Query: 557 TWRPA 561
TWR A
Sbjct: 455 TWRKA 459
>gi|329121962|ref|ZP_08250574.1| cysteine--tRNA ligase [Dialister micraerophilus DSM 19965]
gi|327467260|gb|EGF12763.1| cysteine--tRNA ligase [Dialister micraerophilus DSM 19965]
Length = 481
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/490 (43%), Positives = 309/490 (63%), Gaps = 20/490 (4%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
++ +YNT+ R++++ KP EGKV +YVCGVTPY+ HIG+AR VT+D++ RYL ++GY
Sbjct: 3 EIKVYNTLKREKQIFKPIEEGKVKIYVCGVTPYNHPHIGNARPAVTWDIIRRYLEYIGYH 62
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V +++NFTDVDDKII +AN D ++S RY + + + M LH + P VS HM
Sbjct: 63 VDFIQNFTDVDDKIINKANAEKSDWKTVSTRYIDAYFKVMDALHIRRADIYPYVSKHMED 122
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IIDM+ +++ G AY + DVY+ + F +Y +LSGRK+ED AG RV V++ K+NP DF
Sbjct: 123 IIDMVKTLIEKGHAYVLGNDVYYDISTFKDYCKLSGRKVEDMLAGARVMVNTAKRNPGDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK AK GEPFWESPWG GRPGWHIECS MS YLG +FD HGGG DL+FPHHENEIAQ
Sbjct: 183 ALWKGAKPGEPFWESPWGNGRPGWHIECSVMSTHYLGATFDFHGGGSDLIFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + YW+HNGF+TI+SEKMSKSL NFF ++ V+E Y ALR FL+ THYRSP
Sbjct: 243 SEGATGQKFVKYWLHNGFITINSEKMSKSLNNFFLVKDVLEKYSGDALRYFLLSTHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH----NDF 430
+++S +LE A + + L D + ++ K + + S+ K +F
Sbjct: 303 LDFSDERLEEAEKNM----SKLKDVIARIKEMEKEDGK--VETNESVSLKKAAARTIEEF 356
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
+M+DD +T + L D +K IN + + A+ E++ ++T + +L +LG++
Sbjct: 357 RQAMNDDFNTGLATGVLFDFVKDIN-IYYNAVNSGVAIEKEAVIEAKETFKTILDILGIL 415
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRI-EDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
+ ++ +++ +D D +++ I R ARK K+Y+ +D IR LA +GI +
Sbjct: 416 ESEWN------TQESYAGSDY--DALMEMILSVRETARKEKQYKLADEIRDKLAELGIIV 467
Query: 550 MDSPVGTTWR 559
DS G W+
Sbjct: 468 EDSATGARWK 477
>gi|313891890|ref|ZP_07825492.1| cysteine--tRNA ligase [Dialister microaerophilus UPII 345-E]
gi|313119665|gb|EFR42855.1| cysteine--tRNA ligase [Dialister microaerophilus UPII 345-E]
Length = 481
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/486 (43%), Positives = 307/486 (63%), Gaps = 12/486 (2%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
++ +YNT+ R+++++KP EGKV +YVCGVTPY+ HIG+AR VT+D++ RYL ++GY
Sbjct: 3 EIKVYNTLKREKQILKPIEEGKVKIYVCGVTPYNHPHIGNARPAVTWDIIRRYLEYIGYH 62
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V +++NFTDVDDKII +AN D ++S RY + + + M LH + P VS HM
Sbjct: 63 VDFIQNFTDVDDKIINKANAEKSDWKTVSTRYIDAYFKVMDALHIRRADIYPYVSKHMGD 122
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IIDM+ +++ G AY + DVY+ + F +Y +LSGRK+ED AG RV V++ K+NP DF
Sbjct: 123 IIDMVKTLIEKGHAYVLGNDVYYDISTFKDYCKLSGRKVEDMLAGARVMVNTAKRNPGDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK AK GEPFWESPWG GRPGWHIECS MS YLG +FD HGGG DL+FPHHENEIAQ
Sbjct: 183 ALWKGAKPGEPFWESPWGNGRPGWHIECSVMSTHYLGATFDFHGGGSDLIFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + YW+HNGF+TI+SEKMSKSL NFF ++ V+E Y ALR FL+ THYRSP
Sbjct: 243 SEGATGQKFVKYWLHNGFITINSEKMSKSLNNFFLVKDVLEKYSGDALRYFLLSTHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+++S +LE A + + + + ++ +S+ + + +F +M
Sbjct: 303 LDFSDERLEEAEKNMSKLKDVIARIKEMEKEDGKVETNESVSLKKAAA--RTIEEFRQAM 360
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D +K IN + + A+ E++ ++T + +L +LG++ +
Sbjct: 361 NDDFNTGLATGVLFDFVKDIN-IYYNAVNSGVAIDKEAVIEAKETFKTILDILGILENEW 419
Query: 495 SEVLLQLREKALKRADLTEDQVLQRI-EDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ ++E A D +++ I R +ARK K+Y+ +D IR LA +GI + DS
Sbjct: 420 N-----IQE---SHAGSDYDALMEMILSVREIARKEKQYKLADEIRDKLAELGITVEDSA 471
Query: 554 VGTTWR 559
G W+
Sbjct: 472 TGARWK 477
>gi|163751990|ref|ZP_02159201.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
gi|161328148|gb|EDP99315.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
Length = 459
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/488 (45%), Positives = 296/488 (60%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN+++R++E KP GK+GMYVCG+T YDL HIGH R +V+FD++ RYLR+ GYEV
Sbjct: 2 LKLYNSLTRQKEEFKPLQPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TDVDDKII RA E E SL+ R E H+D L+ P EPR + HMP I
Sbjct: 62 NFQRNITDVDDKIIKRAAENNESCKSLTERLIGEMHRDFDALNMKRPDFEPRATQHMPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ ++++ +AY D GDV FSV F EYG+LSG+ +E +AG RV V+ K++P DF
Sbjct: 122 IDMVEKLIEKEYAYVSDNGDVLFSVSSFAEYGRLSGQNIEQLQAGARVEVEDTKRDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V ID EKMSKSL NFFTIR V++ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLKHYDAGTIRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y +L K L L + P D + KF A+M
Sbjct: 302 LNYSEDNLKQAKSALDRLYTSL----KGLDL-------NVEPADASEFVVKFK----AAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ IN + + L +A+ ++ + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMVREIN--------RVKGSDLAQASAMGVKLKELAGVLGLLDQDV 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ + ++D+V Q I +R AR K++ +D R L A+G+ L D
Sbjct: 399 DIFF---------KGEGSDDEVAQIEALIVERNRARAEKDWPAADVARDGLNALGVILED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPSGTTWR 457
>gi|374335348|ref|YP_005092035.1| cysteinyl-tRNA synthetase [Oceanimonas sp. GK1]
gi|372985035|gb|AEY01285.1| cysteinyl-tRNA synthetase [Oceanimonas sp. GK1]
Length = 459
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/489 (46%), Positives = 296/489 (60%), Gaps = 38/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP V GKVGMYVCGVT YDL HIGH R +V FDV+ RYLR+ GY++
Sbjct: 2 LKIYNSLTRQKEEFKPLVPGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVTRYLRYAGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE +L+ R E ++D L+ P +EP+ + H+P I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDALTERLTAEMYRDFDALNIARPDIEPKATGHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ ++ +G AY D GDV F V+ F +YG+LSG+ LE +AG RV V+ K+NP DF
Sbjct: 122 IAMVDTLIKDGHAYVADNGDVLFEVNSFADYGRLSGQNLEQLQAGARVEVEQSKRNPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W+SPWGPGRPGWHIECSAM+ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKQSKPGEPSWDSPWGPGRPGWHIECSAMNGKHLGKHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A ++ +++ W+H+G V +D EKMSKSLGNFFTIR V++ Y +R FL+ HYRS
Sbjct: 242 SCCANHSPYVNTWMHSGMVMVDQEKMSKSLGNFFTIRDVLKHYDGETIRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L D +P F F A+M
Sbjct: 302 LNYSDENLKQARTALERLYTALRD----------------LPEVAAAGGEDFVARFTAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + IN +KGK A + A L +R + VLGL++
Sbjct: 346 DDDFNTPEAYSVLFDLAREIN----RQKGKDDA----AAAGLGGRLRELAGVLGLLTQ-- 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+A R D D + IE R AR+NK++ +DA R L A+GI L
Sbjct: 396 -------EPEAFLRGDAGADDEVADIERLIQARLDARQNKDWAAADAARDQLTAMGIVLE 448
Query: 551 DSPVGTTWR 559
D P GT WR
Sbjct: 449 DGPEGTRWR 457
>gi|312880084|ref|ZP_07739884.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
gi|310783375|gb|EFQ23773.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
Length = 467
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 300/485 (61%), Gaps = 27/485 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YN ++R++E+ P+ G+V YVCG T YD HIG+AR ++ FDVL RYL H GY V Y
Sbjct: 5 VYNDLTRRKEVFVPQNPGEVRFYVCGPTVYDFFHIGNARPFIVFDVLRRYLEHQGYTVTY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDK+I RA ELG L+ R+ + +D L +V PR ++ +P I++
Sbjct: 65 VQNFTDVDDKMIRRAAELGISVPELAERFIAAYFEDADALGVRRATVHPRATEEIPAILE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I ILD G AY V+GDVYF V +P YG LS + LE+ ++G RV VD RK++P DFALW
Sbjct: 125 LIQAILDRGHAYAVEGDVYFDVKSYPAYGVLSKQSLEELQSGARVEVDPRKRHPLDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ K GEP W+SPWG GRPGWH+ECSAMS +LG + D HGGG DL+FPHHENEIAQS A
Sbjct: 185 KAQKPGEPAWKSPWGMGRPGWHVECSAMSRRHLGETLDFHGGGCDLIFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A + YW+HNG++ ID EKMSKSLGNF T R+ + + PLA+RLF++ HYRSPIN+
Sbjct: 245 ATGKPFVRYWVHNGYLMIDKEKMSKSLGNFLTAREARKRFPPLAIRLFMLSAHYRSPINF 304
Query: 378 S---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
S ++Q +A ER+ + L E AL A+A D + + FLA++
Sbjct: 305 SEEGLMQATAAQERLRNGWTEL---EFALGHRSASAEPDGA---LRRMLREGRERFLAAL 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DDL+T + + D +K +N L G++ LE+L + V +LG++
Sbjct: 359 DDDLNTAGAIGVVFDVVKGVNSSL----GERPDADLEALGQAKTFFLEVEDILGILGVAP 414
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E L E+ V + I++R ARK +++ ++DAIR +L A GI L D+P
Sbjct: 415 EESL--------------EEDVDRLIQERQAARKGRDFARADAIRDELLARGILLEDTPQ 460
Query: 555 GTTWR 559
G W+
Sbjct: 461 GPRWK 465
>gi|386265553|ref|YP_005829045.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R2846]
gi|309972789|gb|ADO95990.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2846]
Length = 459
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 293/490 (59%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y AL+ + V F F +M
Sbjct: 302 LNYSEENLNLAQGALERLY---------------TALRGTDQSAVVFGGENFAETFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLL--HTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
DD +T L+ L + + IN L K A+RL L A +LGL
Sbjct: 347 DDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAVRLRELGA----------ILGL--- 393
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
L Q EK L+ A +D+V + I+ R AR K++ +DA R +L A+GI L
Sbjct: 394 -----LQQDPEKFLQ-AGSNDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMGIVL 447
Query: 550 MDSPVGTTWR 559
D P GTTWR
Sbjct: 448 EDGPNGTTWR 457
>gi|386287683|ref|ZP_10064854.1| cysteinyl-tRNA synthetase [gamma proteobacterium BDW918]
gi|385279193|gb|EIF43134.1| cysteinyl-tRNA synthetase [gamma proteobacterium BDW918]
Length = 467
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/494 (45%), Positives = 305/494 (61%), Gaps = 41/494 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
+ +YNT+SR ++ +KP +GK+GMYVCG+T YD H+GHARV V FDV+ RYLR +EV
Sbjct: 3 IQIYNTLSRSKQPLKPLQDGKIGMYVCGMTVYDYCHLGHARVLVAFDVITRYLRAKAFEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKI+ RA E GE +L+ R+ ++D L + P EPR + H+ I
Sbjct: 63 NYVRNITDIDDKILRRATENGEPYEALTERFIVAMNEDAERLGIIAPDREPRATAHIGDI 122
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MIT+++ G AY+ +GDVY+ V F +YG+LSG+K ++ +G R+AVD K +P DF
Sbjct: 123 IAMITRLIATGHAYQASNGDVYYRVTAFADYGKLSGKKPDELLSGARIAVDEAKDDPRDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+ +G W SPWG GRPGWHIECSAMS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 183 ALWKAVNDGTTSWPSPWGEGRPGWHIECSAMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + W+H G V +D+EKMSKSLGNFFTIR++++ YHP +R FLI +HYRS
Sbjct: 243 SEAATGKKYAQTWMHAGAVRVDNEKMSKSLGNFFTIREILDKYHPEVVRYFLISSHYRSA 302
Query: 375 INYSVVQLESAS---ERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSI------NK 425
INYS L+ A ER ++ Y+ L PP T+ + N
Sbjct: 303 INYSEENLQIAKQNLERFYHAYKGL-------------------PPVTLIAYADLPQEND 343
Query: 426 FHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLT 485
F F A+M+DD + + +A L D ++ +N T K + R+ SLA L K++ VL
Sbjct: 344 FVQRFDAAMADDFNVPLAVAVLYDMVRELN----TAKEAGNSERINSLAQLLKSLAAVLG 399
Query: 486 VLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAV 545
VL L + + L+ + + D + L I +R A+K++++ ++D IR L A
Sbjct: 400 VLQLEADDF------LQSGSADQLDAASIEAL--IAERVQAKKDRQFARADEIRDSLKAQ 451
Query: 546 GIALMDSPVGTTWR 559
G+ L DS GTTWR
Sbjct: 452 GVILEDSREGTTWR 465
>gi|374705751|ref|ZP_09712621.1| cysteinyl-tRNA synthetase [Pseudomonas sp. S9]
Length = 460
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/487 (46%), Positives = 287/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E +KP V +V MYVCG+T YD HIGHARV V FDV+ R+LR GYE+
Sbjct: 2 LTIYNTLSKTKEALKPLVGNQVRMYVCGMTVYDFCHIGHARVMVAFDVIARWLRFRGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE L R H+D L L P +EPR + H+ +
Sbjct: 62 TYVRNITDIDDKIIRRAQENGEGFEVLVERMIAAMHEDEARLSVLRPDMEPRATSHISGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+MI ++D GFAY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HEMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDESKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W SPWG GRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 182 VLWKGAKPGEPSWTSPWGEGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R FL+ + YRSP
Sbjct: 242 SEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYFLVSSQYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P + + F +M
Sbjct: 302 INYSEDSLKEAKGALERFYHALK----------------GLPEAAPAGGDAYAERFAEAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L + ++ IN L T LE+ A L ++ + +VLG++
Sbjct: 346 DDDFNSPEACAVLFEMVREINRLRDT--------DLEAAAGLAARLKQLASVLGVLQL-E 396
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ A + + +QV I R AR K + +SD IR L A+G+ L D
Sbjct: 397 PESFLQ----AGAKGKVDAEQVDALIAARLQARSEKNWAESDRIRDQLTAMGVVLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|91793850|ref|YP_563501.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
gi|123356646|sp|Q12L98.1|SYC_SHEDO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91715852|gb|ABE55778.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
Length = 459
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/488 (45%), Positives = 298/488 (61%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+MSR+++ KP GK+GMYVCG+T YDL HIGH R +V+FD++ RYLR+LGYEV
Sbjct: 2 LKIYNSMSREKQEFKPITPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYLGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TDVDDKII RA E E +L+ R E H+D L+ + P EP+ + HMP I
Sbjct: 62 NFQRNITDVDDKIIKRAAENNESCDALTERLTAEMHKDFDALNMVRPDFEPKATLHMPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+M+ ++LD G AY DGDV FSV + EYG+LSG+ ++ +AG RV +D K+NP DF
Sbjct: 122 IEMVQRLLDRGHAYVAPDGDVLFSVASYKEYGRLSGQNIDQLQAGARVEIDHNKQNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM+ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNGKHLGTHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +D EKMSKSLGNFFTIR V++ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLKHYDAQTVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y D L L AA P D ++ F ++M
Sbjct: 302 LNYSEDNLKQARSALERLYTAFKD----LDLTVTAA-----PAD------EYVTKFKSAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D ++ IN L T G + +AL +++ + VLG++S
Sbjct: 347 NDDFNTPEAYSVLFDMVREINRLKTTDMG--------AASALGVSMKQLADVLGIVSVDI 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ ++D+V + I +R AR K++ +D R L +G+ L D
Sbjct: 399 ETFF---------KGSGSDDEVAEIEALIVERNRARTEKDWAAADVARDRLNQLGVVLED 449
Query: 552 SPVGTTWR 559
GTTW+
Sbjct: 450 GENGTTWK 457
>gi|157962505|ref|YP_001502539.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
gi|187631637|sp|A8H617.1|SYC_SHEPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157847505|gb|ABV88004.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
Length = 459
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/488 (45%), Positives = 297/488 (60%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN+++R++E P GKVGMYVCGVT YDL HIGH R +V+FD++ RYLR+ GY+V
Sbjct: 2 LKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TDVDDKII RANE E SL+ R E H+D L+ P EPR + HMP I
Sbjct: 62 NFQRNITDVDDKIIKRANENKESCDSLTERLIAEMHRDFDALNMARPDNEPRATLHMPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+M+ ++++ AY +GDV FSV FPEYG+LSG+ LE +AG RV V+ K++P DF
Sbjct: 122 IEMVEKLIEREHAYVASNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDAKRDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +D EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLGHYDATTVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + IY L D + L++ A A +F F ++M
Sbjct: 302 LNYSEDNLKQAKSGLERIYTALKDLD--LTVEAAPA-------------EEFVAKFKSAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D ++ IN L +A + +AL ++ + VLG++
Sbjct: 347 DDDFNTPEAYSVLFDMVREINRL--------KATDMAKASALGVALKQLADVLGILGQDV 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ + +D+V + I +R AR K++ +D R L A+G+ L D
Sbjct: 399 DTFF---------KGEGNDDEVAEIEALIVERNRARAEKDWPAADVARDGLNALGVILED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPEGTTWR 457
>gi|145639628|ref|ZP_01795231.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|145642163|ref|ZP_01797732.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
gi|145271185|gb|EDK11099.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|145273154|gb|EDK13031.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
gi|309750601|gb|ADO80585.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2866]
Length = 459
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/488 (46%), Positives = 293/488 (60%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y AL+ + V F F +M
Sbjct: 302 LNYSEENLNLAQGALERLY---------------TALRGADQSAVVFGGENFVETFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + IN L + +E L +R + +LGL
Sbjct: 347 DDDFNTPNALSVLFEMAREINKL--------KTEDVEKANGLAARLRELGAILGL----- 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
L Q EK L+ A +D+V + I+ R AR K++ +DA R +L A+GI L D
Sbjct: 394 ---LQQDPEKFLQ-AGSNDDEVAKIEALIKQRNEARAAKDWPAADAARNELTAMGIVLED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPNGTTWR 457
>gi|417839754|ref|ZP_12485924.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19107]
gi|341951855|gb|EGT78407.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19107]
Length = 459
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 292/489 (59%), Gaps = 38/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y AL+ ++ F F +M
Sbjct: 302 LNYSEENLNLAQGALERLY---------------TALRGTVQSAVAFGGENFVATFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + IN L + +E L +R + +LGL
Sbjct: 347 DDDFNTPNALSVLFEMAREINKL--------KTEDVEKANGLAARLRELGAILGL----- 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGIALM 550
L Q EK L+ ++D + +IE R AR K++ +DA R +L A+GI L
Sbjct: 394 ---LQQEPEKFLQSG--SDDDEVAKIEALIKQRNDARAAKDWSAADAARNELTAMGIVLE 448
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 449 DGPNGTTWR 457
>gi|229846997|ref|ZP_04467103.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
gi|229810081|gb|EEP45801.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
Length = 459
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/488 (45%), Positives = 291/488 (59%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y AL+ + V F F +M
Sbjct: 302 LNYSEENLNLAQGALERLY---------------TALRGTDQSAVVFGGENFVETFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + IN L +A +E L +R + +LG
Sbjct: 347 DDDFNTPNALSVLFEMAREINKL--------KAEDVEKANGLAARLRELGAILG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LLQ + +A +D+V + I+ R AR K++ +DA R +L A+GI L D
Sbjct: 393 ---LLQQEPEKFLQAGSNDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMGIVLED 449
Query: 552 SPVGTTWR 559
GTTWR
Sbjct: 450 GANGTTWR 457
>gi|294141771|ref|YP_003557749.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
gi|293328240|dbj|BAJ02971.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
Length = 459
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/488 (44%), Positives = 297/488 (60%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN+++R++E KP GK+GMYVCG+T YDL HIGH R +V+FD++ RYLR+ GYEV
Sbjct: 2 LKLYNSLTRQKEEFKPIQPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TDVDDKII RA E E SL+ R E H+D L+ P EPR + HMP I
Sbjct: 62 NFQRNITDVDDKIIKRAAENKESCESLTERLIGEMHRDFDALNMKRPDFEPRATLHMPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ ++++ AY +GDV FSV FPEYG+LSG+ +E +AG RV V+ K++P DF
Sbjct: 122 IDMVEKLIEKDHAYVSGNGDVLFSVSSFPEYGRLSGQNIEQLQAGARVEVEDTKRDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W+SPWG GRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGAGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + S+++YW+H G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTSYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLNHYDAGTIRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y +L + ++ DA+ +F F A+M
Sbjct: 302 LNYSEDNLKQAKSALERLYTSLKGLDLSVESADAS---------------EFVAKFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L + ++ IN + + + + +AL ++ + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFEMVREIN--------RVKGSDIAAASALGVKLKELAEVLGLLEQDV 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ + ++D+V Q I +R AR K++ +D R L A+G+ L D
Sbjct: 399 DTFF---------KGEGSDDEVAQIEALIVERNRARAEKDWPAADIARDGLNALGVILED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPSGTTWR 457
>gi|417954102|ref|ZP_12597142.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342816142|gb|EGU51047.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 460
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/489 (44%), Positives = 300/489 (61%), Gaps = 37/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GK+GMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RANE GE SL+ R E H D L+ P VEPR ++++ I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEYIKEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ GFAY D GDV F + K+ EYG+LSG+ LE +AG RV ++S K++ DF
Sbjct: 122 IELVETLIERGFAYVADNGDVMFEIAKYDEYGKLSGQDLEQLQAGARVEIESAKRSSLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + +S + + +F++ +M
Sbjct: 302 LNYSEDNLNQARSALERLYTSLRGLDLTVSAVGGEEY-----------VARFND----AM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L +A + + ++L T+R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KAEDVAAASSLGVTMRQLADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L +A + D D + IE R +R +K++ +D R L +GI L
Sbjct: 393 ---ILHQDPEAFLKGDAGNDDEVAEIEALIKLRNDSRASKDWANADMARDKLTEMGIVLE 449
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 450 DGPEGTTWR 458
>gi|413919531|gb|AFW59463.1| hypothetical protein ZEAMMB73_732444 [Zea mays]
Length = 397
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/389 (55%), Positives = 272/389 (69%), Gaps = 28/389 (7%)
Query: 203 LDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKE 262
++N AY ++GDVYFSV+ FPEY LSGRK + N+AG RVA D+RK+NPADFALWK+AKE
Sbjct: 1 MENDKAYAMEGDVYFSVESFPEYLSLSGRKFDQNQAGARVAFDTRKRNPADFALWKAAKE 60
Query: 263 GEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNNS 322
GEPFW+SPWG GRPGWHIECSAMSA YLGH FDIHGGG DL+FPHHENE+AQS AA S
Sbjct: 61 GEPFWDSPWGRGRPGWHIECSAMSAHYLGHLFDIHGGGKDLIFPHHENELAQSRAAYPES 120
Query: 323 HISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYSVVQL 382
+ W+HNGFV D +KM+KS NFFTIR + LYHPLALR FL+ THYRS +N+S L
Sbjct: 121 EVKCWMHNGFVNKDDKKMAKSDNNFFTIRDITALYHPLALRFFLMRTHYRSDVNHSDQAL 180
Query: 383 ESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDDLHTTV 442
E AS+R++YI+QTL+DCE+ L+ + S+P + I+K H++FL MS+DL TT
Sbjct: 181 EIASDRVYYIFQTLYDCEEVLATYREEGISLSVPFEEQNLIDKHHSEFLKYMSNDLKTTD 240
Query: 443 VL-AALSDPLKTINDLLHTRKGKKQAMR--------------------------LESLAA 475
VL + LK IN L+ K +Q + +++L A
Sbjct: 241 VLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQQQQKKQQQKQQQLQKQPEHYIQALIA 300
Query: 476 LEKTIRNVLTVLGLM-STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEK 534
LE ++N L++LGLM S+ +EVL QL++KALKRA LTE+++ ++IE R VARKNK++E
Sbjct: 301 LEIELKNKLSILGLMPSSSLAEVLKQLKDKALKRAGLTEEKLQEQIEQRNVARKNKQFEI 360
Query: 535 SDAIRKDLAAVGIALMDSPVGTTWRPALP 563
SD IRK+LA GIALMD P GT WRP P
Sbjct: 361 SDGIRKNLATKGIALMDEPSGTVWRPCEP 389
>gi|431927424|ref|YP_007240458.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
gi|431825711|gb|AGA86828.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
Length = 462
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/487 (46%), Positives = 285/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E +P V MYVCG+T YD HIGHARV V FDV+ R+LRH GY+V
Sbjct: 4 LSIYNTLTKTKEAFRPLQGNNVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYDV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L R H+D L L P +EPR +DH+ +
Sbjct: 64 TYVRNITDIDDKIIRRAGENGEPFQALVERMIAAMHEDETRLDVLRPDIEPRATDHIAGM 123
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D GFAY +GDVY+ V KF YG+LS RK+ED + G R+ VD K++P DF
Sbjct: 124 HQMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKQDPLDF 183
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W SPWG GRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 184 VLWKGAKPGEPSWSSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 243
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 244 SEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSP 303
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P ++F F +M
Sbjct: 304 INYSEDSLREAKSALERFYNGLK----------------GLPNVAPAGGDEFVARFATAM 347
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L D ++ +N L R+ A LAA K + +VL VL L +
Sbjct: 348 DDDFNSPEACAVLFDMIREVNRL---RESDPTAA--AQLAARLKELASVLGVLQLEPEAF 402
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D E + L I R AR K + +SD IR L A+G+ L D
Sbjct: 403 ------LQAGAAGKVDAAEVEAL--IAARLTARAEKNWAESDRIRDQLTAMGVVLEDGKG 454
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 455 GTTWRLA 461
>gi|312794405|ref|YP_004027328.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181545|gb|ADQ41715.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 465
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/482 (42%), Positives = 301/482 (62%), Gaps = 28/482 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT+S+ +E +P + KV MYVCG T YD HIG+AR + FD L RY + GYEV Y
Sbjct: 3 LYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEVIY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTDV+DK+I RAN+ G L++R+ EE+++D L+ + PR ++ + +I
Sbjct: 63 IQNFTDVEDKMINRANKEGITVFELAKRFIEEYYKDADRLNVKRATKNPRATEEIEDMIA 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++D G+AY VDGDVYF KF EYG+LS + +E+ AG RV + +K++P DFALW
Sbjct: 123 LIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W SPWG GRPGWHIECS M+ YLG + DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A +W+HNG+V+I++EKMSKSLGNFFT+R+++E YHP ALRLF++ HYR P+N+
Sbjct: 243 ATGKPFARFWLHNGYVSINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPLNF 302
Query: 378 S---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
S + Q E A +RI+ Y+ L L+ AA +I F+ +M
Sbjct: 303 SIDLIEQAEVALKRIYTCYENLE------FLIQNAASSSENDDKLKAAIEDLKAKFIEAM 356
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DDL+T L + ++ IN H K E+L ++ T++ + ++LG++
Sbjct: 357 EDDLNTAEATGYLFEMVREIN--THANSCSK-----ETLTFVKDTLKELCSILGIL---- 405
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E+ + + ++L+ +E R ARK K + ++D IR +L ++G ++D+P
Sbjct: 406 --------EQYGAKEEAIPQEILELVEKRNQARKAKNFAEADRIRDELKSLGYIVLDTPQ 457
Query: 555 GT 556
GT
Sbjct: 458 GT 459
>gi|291287685|ref|YP_003504501.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
gi|290884845|gb|ADD68545.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
Length = 479
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/485 (45%), Positives = 302/485 (62%), Gaps = 15/485 (3%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+S K+E +P + V +YVCGVT YDL HIGHAR FDV+ RYL GY V
Sbjct: 2 LKVFNTLSNKKEEFQPLQKDNVKIYVCGVTVYDLCHIGHARSSGVFDVIRRYLMFKGYNV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTD+DDKII R+NE D L+ + E DM L+ L P P+ +D++ +
Sbjct: 62 TFVKNFTDIDDKIIKRSNEKQMDWRELAANFIAEHDADMDSLNILRPDHTPKATDYIKQM 121
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I M +++ GFAY +GD+Y+ V KF EYG+LS RKLED AG R+ V +K+NP DF
Sbjct: 122 IQMCETLIEKGFAYESNGDIYYRVQKFEEYGKLSHRKLEDMMAGARIEVSVKKENPYDFV 181
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK++K GEP WESPWG GRPGWHIECS MS LG FDIHGGG DLVFPHHENEIAQS
Sbjct: 182 LWKASKPGEPSWESPWGQGRPGWHIECSVMSEDLLGLPFDIHGGGKDLVFPHHENEIAQS 241
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AAC YWIHNGFV ++ EKMSKSLGNFFTIR V++ + +R FL+ THYRS +
Sbjct: 242 EAACGCMFSKYWIHNGFVNVNQEKMSKSLGNFFTIRDVLKEFDAEIVRYFLMTTHYRSAL 301
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
++S L A + + IY L + +S +A I + F + F +M
Sbjct: 302 DFSQDHLLEAEKSLNRIYTMLDE----ISRFNAGKKGVDITKEAEKMKETFMDKFQTAMD 357
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T LAA+ + ++ N LL ++ K L+ A++ + +L VLG++ Y+
Sbjct: 358 DDFNTPEALAAMFEVIRETNRLLGSKPNKISFPALQE--AVQDVFKVILDVLGIVK--YT 413
Query: 496 EVLLQLREKALK-RADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
EK + ++E+++ Q+I+DR A+K+K +E +D+IR++L GI L+D+
Sbjct: 414 P------EKWFRINLSISEEELRQKIQDRADAKKDKNFELADSIRQELKQQGIELLDTID 467
Query: 555 GTTWR 559
GT +R
Sbjct: 468 GTIYR 472
>gi|15606347|ref|NP_213726.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
gi|6831683|sp|O67163.1|SYC_AQUAE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|2983551|gb|AAC07125.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
Length = 495
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/495 (43%), Positives = 310/495 (62%), Gaps = 18/495 (3%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S K E P KV +Y CGVT YD SH+GH R + FDV R+L HLGY+V
Sbjct: 3 LRIYNTLSGKVEEFVPINPPKVLIYTCGVTVYDDSHVGHGRSLIVFDVFRRFLEHLGYQV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRNFTDVDDKII RA + D ++++ RY ++ DM ++ P VEPRV++H+P I
Sbjct: 63 KFVRNFTDVDDKIINRAKQECTDFMTIADRYIARYYVDMENIRVRPADVEPRVTEHIPEI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I++I ++++ G+AY V+GDVYFSV KF +YG+LS R +E+ AG RV +K++P DFA
Sbjct: 123 IEVIQKLVEKGYAYVVEGDVYFSVKKFKDYGKLSKRDIEELIAGARVEPSEKKRDPLDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK++K GEP W+SPWG GRPGWH EC AM +LG + DIHGGG+DLVFPHHENEIAQ+
Sbjct: 183 LWKASKAGEPAWDSPWGKGRPGWHTECVAMVFKHLGETIDIHGGGLDLVFPHHENEIAQA 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A YW+HNG VT+ +KMSKSLGN+ T+R+V YHP LRL ++ THYRSP+
Sbjct: 243 EAITGKPFARYWMHNGLVTVGGQKMSKSLGNYVTLREVYTKYHPDVLRLLVLFTHYRSPL 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDT---VTSINKFHNDFLA 432
++S ++E Y+ L + + L LL + +S T + +F +F A
Sbjct: 303 DFSWEKMEET----LKAYERLKNAIEDLELLKKLQVVESKEGGTHPLYEQVKEFEENFYA 358
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTR-----KGKKQAMRLESLAALEKTIRNVL-TV 486
S+SDD +T ALS K + +L + +GK L + K++ N + +
Sbjct: 359 SLSDDFNTP---EALSHVYKLVGELNKVKNKAYSEGKITDRELSAYEFASKSLLNTMKKI 415
Query: 487 LGLMSTGYSEVLLQ-LREKALKRADLTEDQVLQ-RIEDRTVARKNKEYEKSDAIRKDLAA 544
GL+ Y E ++ + E+ L+ + +++++Q IE R +ARK K ++ +D IR L
Sbjct: 416 FGLLEDLYPECKVERVVERELEAGQVFDEKLIQILIEARNIARKEKVFKVADYIRDKLKE 475
Query: 545 VGIALMDSPVGTTWR 559
+GI L D+P GT W+
Sbjct: 476 LGIVLEDTPAGTKWK 490
>gi|307544947|ref|YP_003897426.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
gi|307216971|emb|CBV42241.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
Length = 467
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/484 (45%), Positives = 300/484 (61%), Gaps = 25/484 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
+ +YNT++R++E P G+V MYVCG+T YD H+GHARV V FDV+ RYLR GY+V
Sbjct: 1 MQIYNTLTRRKETFTPIDPGRVRMYVCGMTVYDYCHLGHARVMVAFDVITRYLRARGYDV 60
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKI+ RA E GE SL+ R + H+D L L P EPR + H+ I
Sbjct: 61 TYVRNITDIDDKILKRAEENGETIASLTDRMIDAMHEDEGRLGVLRPDAEPRATQHVDEI 120
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++D G+AY +GDVY+ V KF +YG+L+ R +D RAG RV V+ K++P DF
Sbjct: 121 VTMIQTLIDKGYAYAASNGDVYYRVRKFADYGKLNNRDPDDMRAGARVDVEELKEDPLDF 180
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GE W SPWGPGRPGWHIECSAMS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 181 VLWKAAKPGEADWLSPWGPGRPGWHIECSAMSTCCLGETFDIHGGGPDLTFPHHENEIAQ 240
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +++ W+H G V + EKMSKSLGNFFTIR+V+E + P +R L+ +HYRSP
Sbjct: 241 SEAATGKQYVNTWMHAGAVRVQHEKMSKSLGNFFTIREVLEHHDPEVVRYLLVASHYRSP 300
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INY+ L A + + E+ + LD AL+ P V F F+ +M
Sbjct: 301 INYAPDSLADARKSL----------ERFYNALDGVALEGVETPGEVDP--SFDRRFIEAM 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T ++ L D + +N + +K+A E AL ++ + VLGL+
Sbjct: 349 DDDFNTAGAISVLFDLARELN------RARKEAP--EQAPALAAELKRLGGVLGLLQQ-E 399
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
V L+ L L+E ++ RI +R A++ +++ ++DAIR +LAA+GI L DS
Sbjct: 400 PAVFLKGGAGELP---LSEAEIEARISERAEAKQARDFARADAIRDELAALGIVLKDSRE 456
Query: 555 GTTW 558
GT+W
Sbjct: 457 GTSW 460
>gi|61216275|sp|Q7NX82.2|SYC_CHRVO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 457
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/487 (46%), Positives = 293/487 (60%), Gaps = 32/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT++R++E KP GKV MYVCG+T YDL HIGHAR+ FDV+YR+L+ GY+V
Sbjct: 2 LSLYNTLTRQKEAFKPIEPGKVSMYVCGMTVYDLCHIGHARMLAAFDVIYRWLKASGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD++DKII RA E G P L + QD L LPP+ EPR + H+ +
Sbjct: 62 NYVRNITDIEDKIIKRALERGITPEQLVEETIADMRQDAAALGLLPPTHEPRATHHVGGM 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI Q++ NG AY +GDVY++V +F YG+LSGR L+ RAGERV VD K++P DF
Sbjct: 122 VAMIEQLIANGKAYPAANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEVDPNKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W+SPWG GRPGWHIECS MS +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+HNGF+ +D EKMSKSLGNFFTIR V++ + +R F++ +HYRSP
Sbjct: 242 SEGAHGHQYVNYWLHNGFINVDGEKMSKSLGNFFTIRDVLQHFDGEVIRFFIVRSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L A + +Y L E S D + + + F A+M
Sbjct: 302 VNYTDSILNDAKHGLTRLYTALRGIELPTS-------------DGIDWNHAYAARFKAAM 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD T+ +A L + +N R LA L K + VL +L T
Sbjct: 349 DDDFGTSEAVAVLFELAGEVN-----------KSRDPQLARLLKDLGGVLGLL----TRD 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
EV LQ + +L+ +QV I+ R AR K++ +SD IR +L A GI L D
Sbjct: 394 PEVFLQ---GGVGEGELSAEQVEALIQARKDARAAKDWAESDRIRDELTAKGIVLEDGAG 450
Query: 555 GTTWRPA 561
GT WR A
Sbjct: 451 GTIWRRA 457
>gi|343506381|ref|ZP_08743870.1| cysteinyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
gi|342802714|gb|EGU38117.1| cysteinyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
Length = 460
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/488 (45%), Positives = 300/488 (61%), Gaps = 35/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GK+GMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RANE GE SL+ R E H D L+ P +EPR ++ +P I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDIEPRATEFIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY +GDV F V KF EYG+LS + L+ +AG RV V+S K++P DF
Sbjct: 122 IALVEKLIERGFAYVASNGDVMFEVSKFDEYGKLSKQDLDQLQAGARVDVESAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM++A LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHNTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L AA D ++ F +M
Sbjct: 302 LNYSEENLNQARASLERLYTSL----RGLDLSVEAAGGD-----------EYQVRFNDAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L + +E +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KTENIEQASALGVVMRQMAEVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+L Q E LK +D+V + I+ R +R +K++ +D R L +GI L D
Sbjct: 393 --ILHQDAEAFLKGDAGNDDEVAEIEALIKLRNDSRASKDWANADLARDKLNEMGIELED 450
Query: 552 SPVGTTWR 559
GTTWR
Sbjct: 451 GAEGTTWR 458
>gi|254229902|ref|ZP_04923306.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262394608|ref|YP_003286462.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451970383|ref|ZP_21923610.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus E0666]
gi|151937606|gb|EDN56460.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262338202|gb|ACY51997.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451933897|gb|EMD81564.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus E0666]
Length = 460
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 297/489 (60%), Gaps = 37/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R E H D L+ P +EPR + +P I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDIEPRATQFIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY D GDV F V KF EYG+LS + L+ +AG RV V++ K++P DF
Sbjct: 122 IELVQKLIERGFAYVADNGDVMFEVRKFDEYGKLSKQDLDQLQAGARVDVETAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L A A + ++ + F A+M
Sbjct: 302 LNYSEENLNQARASLERLYTSL----RGLDLNAAPAGGE-----------EYVSRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L + LE + L +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KTENLEKASELGALMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L +A + D D + IE R +R K++ +D R L +GI L
Sbjct: 393 ---ILHQDPEAFLKGDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLE 449
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 450 DGPEGTTWR 458
>gi|34497201|ref|NP_901416.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
gi|34103057|gb|AAQ59420.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
Length = 459
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/487 (46%), Positives = 293/487 (60%), Gaps = 32/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT++R++E KP GKV MYVCG+T YDL HIGHAR+ FDV+YR+L+ GY+V
Sbjct: 4 LSLYNTLTRQKEAFKPIEPGKVSMYVCGMTVYDLCHIGHARMLAAFDVIYRWLKASGYDV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD++DKII RA E G P L + QD L LPP+ EPR + H+ +
Sbjct: 64 NYVRNITDIEDKIIKRALERGITPEQLVEETIADMRQDAAALGLLPPTHEPRATHHVGGM 123
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI Q++ NG AY +GDVY++V +F YG+LSGR L+ RAGERV VD K++P DF
Sbjct: 124 VAMIEQLIANGKAYPAANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEVDPNKRDPLDF 183
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W+SPWG GRPGWHIECS MS +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKAAKPGEPSWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQFPHHENEIAQ 243
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+HNGF+ +D EKMSKSLGNFFTIR V++ + +R F++ +HYRSP
Sbjct: 244 SEGAHGHQYVNYWLHNGFINVDGEKMSKSLGNFFTIRDVLQHFDGEVIRFFIVRSHYRSP 303
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L A + +Y L E S D + + + F A+M
Sbjct: 304 VNYTDSILNDAKHGLTRLYTALRGIELPTS-------------DGIDWNHAYAARFKAAM 350
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD T+ +A L + +N R LA L K + VL +L T
Sbjct: 351 DDDFGTSEAVAVLFELAGEVN-----------KSRDPQLARLLKDLGGVLGLL----TRD 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
EV LQ + +L+ +QV I+ R AR K++ +SD IR +L A GI L D
Sbjct: 396 PEVFLQ---GGVGEGELSAEQVEALIQARKDARAAKDWAESDRIRDELTAKGIVLEDGAG 452
Query: 555 GTTWRPA 561
GT WR A
Sbjct: 453 GTIWRRA 459
>gi|317051773|ref|YP_004112889.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
gi|316946857|gb|ADU66333.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
Length = 465
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/482 (44%), Positives = 302/482 (62%), Gaps = 22/482 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT S +E P GK +YVCGVT YD HIGHAR V FD + RYL + G+EV +
Sbjct: 4 LYNTQSSSKEDFIPIEPGKARIYVCGVTTYDHCHIGHARSAVAFDSIRRYLSYRGFEVTF 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+N+TD+DDKII RA E GE+ +L+ R+ E +DM L+ LPP++ PR ++H+P +I
Sbjct: 64 VKNYTDIDDKIINRARENGEEWKALAERFISEHDRDMAALYVLPPTIAPRATEHLPEMIA 123
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I ++LDNG+AY+ D++F V +F EYG+LS + LED ++G RV V+ K+NP DF LW
Sbjct: 124 LIEKLLDNGYAYKGGDDIFFRVHRFTEYGKLSHKALEDLQSGSRVEVNPLKENPLDFVLW 183
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K KEGEP WE+ +G GRPGWHIECSAM +LG FDIHGGG DL+FPHHENEIAQS A
Sbjct: 184 KGKKEGEPSWEASFGAGRPGWHIECSAMGHKHLGRVFDIHGGGKDLIFPHHENEIAQSQA 243
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YWIHNGFV I++EKMSKSLGNFFTI+++++ Y P LRLFL THYRSPI++
Sbjct: 244 GYGCAPARYWIHNGFVNINNEKMSKSLGNFFTIKEILQHYDPEVLRLFLAQTHYRSPIDF 303
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
+ A + + +Y+ L + E + DSI P ++ I + F +M DD
Sbjct: 304 CEENMTMARQALEKLYRFLENFENH----EDTRTSDSIAP-VLSDITR---KFEEAMDDD 355
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
++ + LA+L + + T+N L + K + T + VLG+ + S+
Sbjct: 356 FNSALALASLFEGVHTLNKLNPSSADAK---------GIYDTYCRLGDVLGIFQSLPSQW 406
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
+ + L+ D++ RIE R AR++K++ +D IR +L G+ + DS GT+
Sbjct: 407 FAR-----QSTSQLSADEIAARIEARNAARRDKDFATADRIRDELLENGVEIKDSKEGTS 461
Query: 558 WR 559
WR
Sbjct: 462 WR 463
>gi|68248628|ref|YP_247740.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|319896490|ref|YP_004134683.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
gi|81336945|sp|Q4QPG7.1|SYC_HAEI8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|68056827|gb|AAX87080.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|317431992|emb|CBY80340.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
Length = 459
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/488 (46%), Positives = 295/488 (60%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y AL+ + V F F +M
Sbjct: 302 LNYSEENLNLAQGALERLY---------------TALRGTDQSAVVFGGENFVETFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + IN L + A + LAA +R + +LGL
Sbjct: 347 DDDFNTPNALSVLFEMAREINKL-----KTEDAEKANGLAA---RLRELGAILGL----- 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
L Q EK L+ A +D+V + I+ R AR K++ +DA R +L A+GI L D
Sbjct: 394 ---LQQDPEKFLQ-AGSDDDEVAKIEALIKQRNEARAAKDWATADAARNELIAMGIVLED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPNGTTWR 457
>gi|374992959|ref|YP_004968458.1| cysteinyl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
gi|357211325|gb|AET65943.1| cysteinyl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
Length = 452
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/462 (44%), Positives = 297/462 (64%), Gaps = 14/462 (3%)
Query: 99 MYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGED 158
MYVCG T Y+ H G+AR++V FD++ RY + GY+V YV+NFTDVDDKII R N G D
Sbjct: 1 MYVCGPTTYNYFHAGNARMFVVFDMIRRYFIYKGYDVRYVQNFTDVDDKIIQRGNVEGMD 60
Query: 159 PISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFS 218
P++L ++Y EE+ +D L+ +P +V P+ ++H+P +I++I ++D G AY VDGDVYF+
Sbjct: 61 PLALGQKYIEEYFKDAKALNLMPATVHPKATEHIPEMIEIIQGLIDTGLAYEVDGDVYFA 120
Query: 219 VDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGW 278
V++FP+YG+LSGR +ED +AG RV VD RKK+P DFALWK AK GEPFW+SPWG GRPGW
Sbjct: 121 VERFPDYGKLSGRTIEDMKAGARVEVDERKKHPMDFALWKKAKPGEPFWQSPWGEGRPGW 180
Query: 279 HIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNNSHIS-YWIHNGFVTIDS 337
HIECSAMS YLG FDIHGGG DL FPHHENEIAQ+ + YW+HN F+TI+
Sbjct: 181 HIECSAMSLKYLGAGFDIHGGGEDLSFPHHENEIAQTEGYLKGETFARYWMHNAFLTINQ 240
Query: 338 EKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLH 397
EKMSKSLGNFFTIR+++E +R +L+GTHYRSP++++ L A + + + ++
Sbjct: 241 EKMSKSLGNFFTIRELLENNPGEVIRFYLLGTHYRSPLDFNDQNLSMAQKGLERLQTSVR 300
Query: 398 DCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDL 457
++AL+ D I V + + F +M DD ++ + AAL + KT+N
Sbjct: 301 LAQEALN-RSGTQKNDPIHGGLVEAAQEARKAFEKAMDDDFNSALAYAALFELAKTMNGH 359
Query: 458 LHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVL 517
+ K+ + E LA +KT+ + VLG LL + +++ +L +
Sbjct: 360 V-----KENSQSSEGLAVAQKTLIELGGVLGF-------DLLHPAQVSVENEELLSQVMN 407
Query: 518 QRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWR 559
++ R+ +R+ K++E +D IR L GI + D+P G W+
Sbjct: 408 VVLQIRSKSRQKKDWEMADFIRDSLKEKGIVIEDTPQGARWQ 449
>gi|417846323|ref|ZP_12492331.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21639]
gi|341952725|gb|EGT79246.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21639]
Length = 459
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 295/488 (60%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ +R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAETVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y AL+ + V F F +M
Sbjct: 302 LNYSEENLNLAQGALERLY---------------TALRGTDQSAVVFGGENFVATFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + ++ IN L + A + LAA +R + +LGL
Sbjct: 347 DDDFNTPNALSVLFEMVREINKL-----KTEDAEKANGLAA---RLRELGAILGL----- 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
L Q EK L+ A +D+V + I+ R AR K++ +DA R +L A+GI L D
Sbjct: 394 ---LQQDPEKFLQ-AGSDDDEVAKIEALIKQRNEARAAKDWSAADAARNELTAMGIVLED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPNGTTWR 457
>gi|300721928|ref|YP_003711208.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
gi|297628425|emb|CBJ88990.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
Length = 460
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/488 (45%), Positives = 289/488 (59%), Gaps = 35/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP EGKVGMYVCG+T YDL HIGH R +V FD + RYLR+LGY++
Sbjct: 2 LKIFNTLSRQKEEFKPIHEGKVGMYVCGITIYDLCHIGHGRTFVAFDAIARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H D L+ L P EPR + H+ I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNESCDDLTTRMLAEMHNDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY +GDV FS+D P+YG LS + LE +AG RV V K+NP DF
Sbjct: 122 IEITETLIERGHAYVAANGDVMFSIDTNPDYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K+GEP WESPWG GRPGWHIECSAM+ LGH FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKQGEPSWESPWGTGRPGWHIECSAMNGKTLGHHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLGYYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + +Y +L +K+ A F F +M
Sbjct: 302 LNYTEENLKQARTSLERLYTSLRGTDKSAQPAGGAG---------------FEARFTEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L +A + + L +R + +LGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KAEDIVAANGLAAELRKLAGILGLLE--- 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
Q E L+ +D V Q I+ R ARKNKE+ +DA R L +GI L D
Sbjct: 396 -----QEPEHFLQGGAQVDDDVAQIEALIKQRNDARKNKEWALADAARNQLNELGIELED 450
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 451 GPQGTTWR 458
>gi|268591223|ref|ZP_06125444.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
gi|291313193|gb|EFE53646.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
Length = 462
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/485 (44%), Positives = 300/485 (61%), Gaps = 27/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FD + RYLR+LGY++
Sbjct: 2 LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E +L+ R E H+D L+ L P EPR + H+ I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEALTTRMLAEMHKDFDALNILRPDSEPRATRHIGEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY +GDV F V P YG LS + LE +AG RV V K+NP DF
Sbjct: 122 IELTQSLIERGHAYVAANGDVMFEVKTDPNYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP WESPWG GRPGWHIECSAM++ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSL NFFTIR V+E Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + +Y L +K+ ++P ++F F+ +M
Sbjct: 302 LNYTEENLKQARSALERMYTALRGTDKS-----------AVPAGG----DEFKARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D ++ +N L ++ + + + +R + +VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMVREVNRL--------KSEDMSAANGMAAQLRELASVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
EV L+ + A++ + + L I+ R ARKNK++ ++DA R +L A+GI L DS
Sbjct: 398 PEVFLKGGAQTEDDAEVAKIEAL--IQQRLDARKNKDWAQADAARDELTAMGIVLEDSAQ 455
Query: 555 GTTWR 559
GT WR
Sbjct: 456 GTIWR 460
>gi|350531832|ref|ZP_08910773.1| cysteinyl-tRNA synthetase [Vibrio rotiferianus DAT722]
Length = 460
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 297/489 (60%), Gaps = 37/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R E H D L+ P VEPR + + I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY D GDV F V KF EYG+LS + LE +AG RV +++ K++P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLEQLQAGARVDIETAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L A A + ++ + F A+M
Sbjct: 302 LNYSEDNLNQARASLERLYTSL----RGLDLNAAPAGGE-----------EYVSRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L + LE + L +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KTENLEKASELGALMRELAEVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L +A + D D + IE R +R K++ +D R L +GI L
Sbjct: 393 ---ILHQDPEAFLKGDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLE 449
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 450 DGPEGTTWR 458
>gi|148827229|ref|YP_001291982.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
gi|187629826|sp|A5UFP3.1|SYC_HAEIG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148718471|gb|ABQ99598.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
Length = 459
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/488 (46%), Positives = 293/488 (60%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y AL+ + V F F +M
Sbjct: 302 LNYSEENLNLAQGALERLY---------------TALRGADQSAVVFGGENFVETFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + IN L + +E L +R + +LGL
Sbjct: 347 DDDFNTPNALSVLFEMAREINKL--------KTEDVEKANGLAARLRELGAILGL----- 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
L Q EK L+ A +D+V + I+ R AR K++ +DA R +L A+GI L D
Sbjct: 394 ---LQQDPEKFLQ-AGSDDDEVAKIEVLIKQRNEARAAKDWPVADAARNELTAMGIVLED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPNGTTWR 457
>gi|312885230|ref|ZP_07744908.1| cysteinyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367089|gb|EFP94663.1| cysteinyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 459
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/488 (44%), Positives = 303/488 (62%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GK+GMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RANE E +L+ R E H+D L+ P +EP+ ++++ I
Sbjct: 62 TFVRNITDIDDKIITRANENNESCEALTERLIGEMHRDFDALNMKRPDIEPKATEYIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY D GDV F V KF EYG+LS + L+ +AG RV V+S K++P DF
Sbjct: 122 IQLVEKLIERGFAYVADNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVESAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V++ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDSETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + + D ++ + F +M
Sbjct: 302 LNYSEENLNQARAGLERLYTSLRGLDLTVPAADG---------------EEYVSRFTEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN + +A E +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREIN--------RVKATDNEHASALGSLLRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+L Q E L+ +D +DQV + I+ R +R K++ +D R L A+GI L D
Sbjct: 393 --ILHQDPEAFLQGSD-DKDQVAEIEALIKLRNDSRAAKDWATADVARDKLTAMGIVLED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPSGTTWR 457
>gi|381394421|ref|ZP_09920138.1| cysteinyl-tRNA synthetase [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379330023|dbj|GAB55271.1| cysteinyl-tRNA synthetase [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 459
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/490 (44%), Positives = 299/490 (61%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S++++ P V+ KVG+YVCG+T YDL H+GHAR Y++FD++ RYLRHLG+EV
Sbjct: 2 LQIYNTLSKEKQPFTPIVKNKVGLYVCGITVYDLCHMGHARTYLSFDIVLRYLRHLGFEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA + E P L++R E H D L+ L P VEPRV+ HMP I
Sbjct: 62 KYVRNITDVDDKIIQRAQQNNETPGELTQRTITEMHADFAALNLLKPDVEPRVTTHMPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I +I +++D G+AY+ GDV F V+ + YG+LS + L +G RV S K +P DF
Sbjct: 122 ITVIERLIDKGYAYQSSTGDVLFKVNAYEGYGKLSKQDLSQLVSGIRVQTTSDKHDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK KEGE W SPWG GRPGWHIECSAM+ +LG FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 ILWKGVKEGEISWASPWGEGRPGWHIECSAMNHKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H G V I++EKMSKSL NFFT+R V+E + LR FL+ HYRS
Sbjct: 242 SCCAYDTPYVNTWMHTGMVQINNEKMSKSLDNFFTLRSVLEKHDAETLRFFLMSAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YS ++ A + Y +L D + + D S + F A+M
Sbjct: 302 LSYSQENIDQARASLERFYTSLRDVKANV--------------DVEMSYGGYLAKFEAAM 347
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD + V +A L D +K +N L K ++ AL R++ +LG++
Sbjct: 348 NDDFNMPVAVAVLFDIVKDLNKLDSNSDEAK-----DTAGAL----RHLGKILGILENEP 398
Query: 495 SEVLLQLREKALKRADLTED---QVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ L + DL++D Q+ I R AR +K + +DAIR +L+A+G+ L +
Sbjct: 399 EQFL---------QGDLSQDLTAQIEALIAKRIQARTDKNWASADAIRDELSALGVILEE 449
Query: 552 SPVGTTWRPA 561
S GTTWR A
Sbjct: 450 SKTGTTWRKA 459
>gi|312126760|ref|YP_003991634.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311776779|gb|ADQ06265.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 465
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/480 (43%), Positives = 303/480 (63%), Gaps = 24/480 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++ +E +P EGKV MYVCG T YD HIG+AR + FD L RY + GYEV Y
Sbjct: 3 LYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEVIY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTDV+DK+I RAN+ G L+ R+ +E+++D L+ + PR ++ + +I
Sbjct: 63 IQNFTDVEDKMINRANKEGITVFELAERFIQEYYKDADRLNVKRATKNPRATEEIEDMIA 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++D G+AY VDGDVYF KF EYG+LS + +E+ AG RV + +K++P DFALW
Sbjct: 123 LIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W SPWG GRPGWHIECS M+ YLG + DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A +W+HNG+V I++EKMSKSLGNFFT+R+++E YHP ALRLF++ HYR P+N+
Sbjct: 243 ATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPLNF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV-TSINKFHNDFLASMSD 436
S+ +E A + IY C + L L A S D + +I F+ +M D
Sbjct: 303 SIDLIEQAEVALKRIYT----CYENLEFLIQNAASSSENDDMLKAAIEDLKAKFIDAMED 358
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
DL+T L + ++ IN ++ E+L + T++ + ++LG++ YSE
Sbjct: 359 DLNTAEATGYLFEMVREINTYANS-------CSKETLTFAKDTLKELCSILGILEQ-YSE 410
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
+E+A+ + ++L+ ++ R ARK K + ++D IR +L ++G ++D+P GT
Sbjct: 411 -----KEEAIPQ------EILELVKKRNQARKAKNFAEADRIRDELKSLGYIVLDTPQGT 459
>gi|419845824|ref|ZP_14369087.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK2019]
gi|386414862|gb|EIJ29404.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK2019]
Length = 477
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/506 (45%), Positives = 299/506 (59%), Gaps = 45/506 (8%)
Query: 65 GDDKPASASTQ-----LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYV 119
G +K S S Q L ++NT++R++E+ KP EGKVGMYVCGVT YDL HIGH R +V
Sbjct: 4 GAEKVRSNSNQKRKNMLKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFV 63
Query: 120 TFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHC 179
FDV+ RYLR LGY++ YVRN TDVDDKII RA E E L R +E ++D L+
Sbjct: 64 CFDVIARYLRSLGYDLTYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNV 123
Query: 180 LPPSVEPRVSDHMPHIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRA 238
L P EPR + H+P II+++ +++ G AY D GDV F V+ F EYG+LS + L+ +A
Sbjct: 124 LRPDFEPRATHHIPEIIEIVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLDQLQA 183
Query: 239 GERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHG 298
G R+ ++ KKNP DF LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHG
Sbjct: 184 GARIEINEIKKNPMDFVLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHG 243
Query: 299 GGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYH 358
GG DL+FPHHENEIAQSC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+
Sbjct: 244 GGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYN 303
Query: 359 PLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPD 418
A+R FL+ HYRS +NYS L A + +Y L +++ D+
Sbjct: 304 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVDA---- 359
Query: 419 TVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLL--HTRKGKKQAMRLESLAAL 476
F +M DD +T L+ L + + IN L + K A RL LA
Sbjct: 360 -----------FREAMDDDFNTPNALSVLFEMAREINKLKTEYAEKANGLAARLRELAG- 407
Query: 477 EKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYE 533
VLGL L Q EK L+ A +D+V + I+ R AR K++
Sbjct: 408 ---------VLGL--------LQQDPEKFLQ-AGSDDDEVAKIEALIKQRNEARAAKDWT 449
Query: 534 KSDAIRKDLAAVGIALMDSPVGTTWR 559
+DA R +L A+GI L D GTTWR
Sbjct: 450 AADAARNELTAMGIVLEDGSNGTTWR 475
>gi|406894538|gb|EKD39329.1| hypothetical protein ACD_75C00439G0007 [uncultured bacterium]
Length = 490
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/486 (42%), Positives = 291/486 (59%), Gaps = 10/486 (2%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
++NT+S ++E+++ G V +YVCG+T YD HIGHAR + FD++ YL++ GY+V Y
Sbjct: 5 IHNTLSGQKEILQTIEPGHVKLYVCGITSYDYCHIGHARSALAFDMIVNYLKYRGYKVTY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTD+DDKIIARA E L+ R+ EF+ DM L P +EP+ ++H+ +ID
Sbjct: 65 VRNFTDIDDKIIARAKEQQTSSEELAARFINEFYVDMDRLGINRPDIEPKATEHITEMID 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++ G AY DVY+ VD FP YG+LS R D +AG R++V+ +K+NP DF LW
Sbjct: 125 LIGELVGKGKAYPSGNDVYYVVDSFPGYGKLSKRNPADMQAGARISVNEQKRNPMDFVLW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K +K GEP W SPWGPGRPGWHIECSAMS YLG +FDIHGGG DL+FPHHENEIAQS
Sbjct: 185 KGSKPGEPTWASPWGPGRPGWHIECSAMSRKYLGETFDIHGGGQDLIFPHHENEIAQSEG 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A + WIH+GFVTI EKMSKSLGNF TIR ++ YHP LR F+ THYR+P+++
Sbjct: 245 ANGKPFATTWIHHGFVTIRDEKMSKSLGNFLTIRDILSHYHPEILRFFIFSTHYRNPLDF 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVT-----SINKFHNDFLA 432
S ++ A+ + + L++C A+ LD+ +DS P +T + F
Sbjct: 305 SESAMQDATAGL----ERLYECLAAVDRLDSGK-RDSALPSVLTENDLRQLKGMETRFQQ 359
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M +D +T D +K+IN + A ++ L +T+R + ++G++
Sbjct: 360 AMDNDFNTAQAQGVFFDTVKSINRICRKLPATPSAGDIQFLKNGAETLRKLADIMGILRE 419
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L + K + L + I +R R K + + D IR L A I L D
Sbjct: 420 DANTFLAAGKNKKISEGGLNVAAIETLIAERYECRLAKNWARGDEIRDLLLAQNIELKDG 479
Query: 553 PVGTTW 558
P GTTW
Sbjct: 480 PAGTTW 485
>gi|444427437|ref|ZP_21222819.1| cysteinyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444239314|gb|ELU50884.1| cysteinyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 460
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/489 (44%), Positives = 298/489 (60%), Gaps = 37/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R E H D L+ P VEPR + + I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY D GDV F V KF EYG+LS + LE +AG RV +++ K++P DF
Sbjct: 122 IELVAKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLEQLQAGARVDIETAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L +++P +++ + A+M
Sbjct: 302 LNYSEDNLNQARASLERLYTSL----RGLDL-------NAVPAGGEEYVSR----YTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L + LE + L +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KTENLEKASELGALMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L +A + D D + IE R +R K++ +D R L +GI L
Sbjct: 393 ---ILHQDPEAFLKGDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLE 449
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 450 DGPEGTTWR 458
>gi|260779213|ref|ZP_05888105.1| cysteinyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
gi|260605377|gb|EEX31672.1| cysteinyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
Length = 460
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/489 (44%), Positives = 298/489 (60%), Gaps = 37/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RANE GE SL+ R E H D L+ P VEPR ++ + I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY D GDV F V +F EYG+LS + L+ +AG RV V+S K++P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGQFDEYGKLSKQDLDQLQAGARVDVESAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L AA + ++ F +M
Sbjct: 302 LNYSEENLNQARASLERLYTSL----RGLDLTVPAAGGE-----------EYVKRFTEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN + + LE +A+ +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRIKND--------NLEQASAMGSLMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L +A + D D + IE R +R +K++ +D R L +GI L
Sbjct: 393 ---ILHQEPEAFLKGDAGNDDEVAEIEGLIKLRNDSRASKDWANADMARDKLTEMGIVLE 449
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 450 DGPEGTTWR 458
>gi|260424802|ref|ZP_05733345.2| cysteine--tRNA ligase [Dialister invisus DSM 15470]
gi|260403249|gb|EEW96796.1| cysteine--tRNA ligase [Dialister invisus DSM 15470]
Length = 488
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/498 (44%), Positives = 307/498 (61%), Gaps = 36/498 (7%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
++ +YNT++ ++ + +P V G+V +YVCGVTPY+ HIG+AR VT+DV+ RYL+H+GY+
Sbjct: 10 EIKVYNTLTGEKTVFRPLVPGEVKIYVCGVTPYNHPHIGNARPAVTWDVICRYLKHIGYK 69
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V +V+NFTDVDDKII +AN G D ++S RY + + Q M +H V PRVSDHM
Sbjct: 70 VEFVQNFTDVDDKIINKANAEGSDWKTISDRYIDAYFQVMDAMHVRRADVYPRVSDHMQD 129
Query: 195 IIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IIDM+ ++D G AY + DVY+ + F YG LSGRK++D AG R+ V+ K+NP DF
Sbjct: 130 IIDMVQGLIDKGHAYVLGNDVYYDISTFEHYGALSGRKIDDMLAGARIEVNEGKRNPGDF 189
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK AK GEPFWESPWG GRPGWHIECSAMS YLG +FD HGGG DL+FPHHENEIAQ
Sbjct: 190 ALWKGAKPGEPFWESPWGKGRPGWHIECSAMSVHYLGKTFDFHGGGSDLIFPHHENEIAQ 249
Query: 315 S--CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
S C C ++YW+HNGF+TI+SEKMSKSL NFF + V++ Y ALR FL+ YR
Sbjct: 250 SEGCTGC--KFVNYWLHNGFITINSEKMSKSLNNFFLAKDVLKEYSGDALRYFLLSVQYR 307
Query: 373 SPINYSVVQLESAS---ERIFYIYQTLHDCEKALSLLDAAALKD---SIPPDTVTSINKF 426
+P++YS +L+ A ER+ + + L K L+ + A D S+ S+ F
Sbjct: 308 NPLDYSRDRLDEAEKNMERLSGVIRRL----KELAAKEGAEKTDASRSLEKAAEESLKAF 363
Query: 427 HNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTV 486
H +M DD +T + A+ D K IN + T ++ E++ ++ ++ +
Sbjct: 364 HE----AMDDDFNTGLATGAMFDLAKAIN-IYGTAVDGGLSVDHEAVEKAYTALKTIMDI 418
Query: 487 LGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIED-----RTVARKNKEYEKSDAIRKD 541
LG++ E+ ++ D +D+ + D R ARK K Y+ +D IR
Sbjct: 419 LGIL------------EEVWEKTDSPDDKSYNDLMDIILAVRQTARKEKMYKIADEIRDR 466
Query: 542 LAAVGIALMDSPVGTTWR 559
L A GI + D+P G W+
Sbjct: 467 LDAAGIVIEDTPTGARWK 484
>gi|334338878|ref|YP_004543858.1| cysteinyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
gi|334090232|gb|AEG58572.1| cysteinyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
Length = 486
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/492 (44%), Positives = 304/492 (61%), Gaps = 21/492 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R +E P G+V MYVCG T Y+ H+G+AR V FD + RY + GY+V Y
Sbjct: 3 IYNTLTRLKEEFIPGEPGQVKMYVCGPTTYNFIHLGNARPLVFFDTVRRYFMYKGYKVYY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTDVDDKII RA + DP++L+++Y EF D L+ L P+VS+H+ II+
Sbjct: 63 IQNFTDVDDKIINRAKKENLDPLALAKKYINEFFVDGDALNVLRADRYPKVSEHIKEIIN 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I + + G AY V+GDVYFSV FP YG+LSGR LED +AG RV VD RKK+P DFALW
Sbjct: 123 LIKLLQERGHAYEVEGDVYFSVRSFPGYGKLSGRSLEDMQAGARVEVDPRKKDPMDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK EP W+SPWG GRPGWHIECSAM+ YLG FDIHGGG DL+FPHHENEIAQS A
Sbjct: 183 KAAKPEEPSWQSPWGNGRPGWHIECSAMAGKYLGSGFDIHGGGFDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
AC YW+HNGF+T++ EKMSKSLGNFF +R++++ + P +R FL+ THYRSP+++
Sbjct: 243 ACKQPFARYWMHNGFITVNQEKMSKSLGNFFLVREILDKFPPDVIRWFLLSTHYRSPLDF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHN-------DF 430
+L A + L + AL LL A + + + + + FH +F
Sbjct: 303 DDEKLAVAG-------RGLERIKTALRLLYEAMERPASGEEEAGAGSSFHEKLTLLRLEF 355
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKT---IRNVLTVL 487
+M DD +T + ++ + K IN L++ G + E++ A+E+ ++ VL
Sbjct: 356 EKAMDDDFNTALAISVFFELAKEINILVN---GMGDKISPEAVLAMEQAHDLVKEFNRVL 412
Query: 488 GLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGI 547
G++ L L E + + LTE V I+ R AR K++ +D IR L +GI
Sbjct: 413 GVLKEDPVSGKLVL-ETSGEDDGLTEGLVQLIIKIRQEARSKKDWSTADTIRDGLKELGI 471
Query: 548 ALMDSPVGTTWR 559
L D+P G W+
Sbjct: 472 ILEDTPQGVRWK 483
>gi|152996132|ref|YP_001340967.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
gi|189082069|sp|A6VX53.1|SYC_MARMS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150837056|gb|ABR71032.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
Length = 460
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/484 (46%), Positives = 296/484 (61%), Gaps = 29/484 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S K+E+ KP EGKVGMYVCG T YD HIGHAR ++FDV+ R++RHLGYE+
Sbjct: 2 LKIYNTLSGKKEIFKPIEEGKVGMYVCGNTVYDFCHIGHARAMISFDVISRFIRHLGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E SL+ R +D + L P EP+ ++ M I
Sbjct: 62 NYVRNITDVDDKIIKRAEENNESTQSLTERMIAAQREDELRLGNKMPDREPKATEFMQEI 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ ++D GFAY+ GDVY+ KF +YG+L+ RKLED AG R+ V+ K++PADF
Sbjct: 122 IDMVQVLIDKGFAYQGTSGDVYYRATKFKDYGKLNNRKLEDMLAGARIDVEVAKEHPADF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GE W SPWG GRPGWHIECSAMS LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKQAKAGEVSWSSPWGEGRPGWHIECSAMSTNCLGSHFDIHGGGPDLKFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +++YW+H G V +++EKMSKSLGNFFT+R V+ ++P +R ++ + YRS
Sbjct: 242 SEAATGKEYVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLAKFNPEVVRYLMVSSQYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
I+YS L A + +Y L + A +S P F F +M
Sbjct: 302 IDYSDQSLLEAKVALERLYTALRQQQVA----------ESFEPTV------FTERFEEAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T V ++ L + ++ +N K K + SL A E +R++ +LGL+
Sbjct: 346 KDDFNTAVAVSVLFELVRELN------KAKTEDANKASLLAAE--LRSLAELLGLLYQD- 396
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ + L E + I++RT ARK+K + +SD IR +LA+ GI L+DS
Sbjct: 397 PEYFLQ---NSTVSEGLGEVAIQALIDERTQARKDKNFARSDEIRDELASQGIELLDSRE 453
Query: 555 GTTW 558
GTTW
Sbjct: 454 GTTW 457
>gi|83644974|ref|YP_433409.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
gi|109894904|sp|Q2SK40.1|SYC_HAHCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|83633017|gb|ABC28984.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
Length = 467
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/487 (44%), Positives = 313/487 (64%), Gaps = 22/487 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +Y+++S+++E KP GKVG+YVCG+T YD H+GHARV V FD++ RYLR GY+V
Sbjct: 2 LKIYSSLSQQKEEFKPIQAGKVGIYVCGMTVYDYCHLGHARVLVCFDIITRYLRAKGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKI+ RA + GE +L+ R+ + H+D L L P+ EPR + H+ I
Sbjct: 62 NYVRNITDVDDKILNRARDNGESVDALTARFIDAMHEDERALGVLSPTSEPRATGHIDEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +++D G+AY +GDVY+SV++F +YG+LS +KL++ RAG R+ VD+ K++PADF
Sbjct: 122 IAMIQRLMDKGYAYHASNGDVYYSVEQFADYGKLSKQKLDEIRAGARIEVDAEKRSPADF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GE W+SPWG GRPGWHIECSAMS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGELSWDSPWGEGRPGWHIECSAMSTRCLGDTFDIHGGGPDLKFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +++YW+H G V ++ EKMSKSLGNFFTIR++++ Y +R FL +HYRS
Sbjct: 242 SEAATGCKYVNYWMHAGAVRVNKEKMSKSLGNFFTIREILDKYPAEVVRYFLASSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
I+YS V LE A + +Y ++ + L A ++ + + + ++ F +M
Sbjct: 302 IDYSDVALEEARSGLERLYNSIREL---YGELGAVSMDEPL-------VGEYRERFHQAM 351
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T+ +A L D K +N + ++ + +A+ +L K + ++ VLGL+
Sbjct: 352 DDDFNTSSAVAVLFDMAKAVN--VAKKEDRTRAL------SLAKGMVDLAEVLGLLQAD- 402
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E L+Q + + L+ ++ I R AR NK++ +SD IR L G+ L DS
Sbjct: 403 PESLMQGEGEEV--GGLSVAEIEDFIAQRNAARANKDFAESDRIRDLLKEKGVLLNDSRE 460
Query: 555 GTTWRPA 561
GT+W+ A
Sbjct: 461 GTSWQRA 467
>gi|16272052|ref|NP_438251.1| cysteinyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
gi|260580618|ref|ZP_05848445.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
gi|1174501|sp|P43816.1|SYC_HAEIN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|1573026|gb|AAC21753.1| cysteinyl-tRNA synthetase (cysS) [Haemophilus influenzae Rd KW20]
gi|260092680|gb|EEW76616.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
Length = 459
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/488 (45%), Positives = 292/488 (59%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEYFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +++ A A F F +M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQS-----AVAFGGE----------NFVATFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + IN L + +E L +R + +LG
Sbjct: 347 DDDFNTPNALSVLFEMAREINKL--------KTEDVEKANGLAARLRELGAILG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LLQ + +A +D+V + I+ R AR K++ +D+ R +L A+GI L D
Sbjct: 393 ---LLQQEPEKFLQAGSNDDEVAKIEALIKQRNEARTAKDWSAADSARNELTAMGIVLED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPNGTTWR 457
>gi|89093601|ref|ZP_01166548.1| Cysteinyl-tRNA synthetase, class Ia [Neptuniibacter caesariensis]
gi|89081997|gb|EAR61222.1| Cysteinyl-tRNA synthetase, class Ia [Oceanospirillum sp. MED92]
Length = 461
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/484 (44%), Positives = 301/484 (62%), Gaps = 29/484 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++++ P EGK+ MYVCGVT YDL HIGHARV V FDV+ R++R G++V
Sbjct: 2 LQIYNTLTKEKSPFTPIEEGKIKMYVCGVTVYDLCHIGHARVMVAFDVITRFMRSQGWDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE+P L+ R H+D L L P+ EPR + H+ I
Sbjct: 62 DYVRNITDVDDKIIKRAAENGEEPHELTERMIAAMHEDEARLSVLRPTQEPRATAHIGDI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ +++ GFAY +GDVY+ V+KF +YG+L+ + +++ + G R+ V+ K++P DF
Sbjct: 122 ISLVETLIEKGFAYPAANGDVYYRVEKFADYGKLTNKNVDELKTGARIEVEEAKESPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWKSAKEGE W+SPWG GRPGWHIECSAMS LG++FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKEGEVSWDSPWGKGRPGWHIECSAMSKCCLGNTFDIHGGGPDLPFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++++ W+H G V ++SEKMSKSLGNFFTIR V+E Y+ +R FL HYR+
Sbjct: 242 SEAANGCTYVNTWMHAGPVRVNSEKMSKSLGNFFTIRDVLEKYNAEVVRFFLARVHYRTY 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
I+YS L+ A + YQ L + L+ N F F+A+M
Sbjct: 302 IDYSEDSLKEARVMLERFYQALRGVDAVEGPLE----------------NDFEERFIAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T ++ + + + +N TR+G +A AL +R + +LGL+
Sbjct: 346 NDDFNTPKAVSVMFELVNELNKA--TREGASEA------PALAAQLRKLGGMLGLLQQNA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E L E+ L+ +++ Q I DR A+K K + ++D IR DLA+ GI L DS
Sbjct: 398 DEFLQGESEE----GGLSNEEIEQLIVDRAEAKKAKNFAEADKIRDDLASQGIILKDSRE 453
Query: 555 GTTW 558
GT+W
Sbjct: 454 GTSW 457
>gi|204930486|ref|ZP_03221416.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|452121220|ref|YP_007471468.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|204320420|gb|EDZ05623.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|451910224|gb|AGF82030.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 461
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/485 (45%), Positives = 296/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGED----MTAANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V LQ +A ++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PDVFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWTAADAARDRLTEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|86147083|ref|ZP_01065400.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
gi|85835148|gb|EAQ53289.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
Length = 461
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/485 (45%), Positives = 302/485 (62%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RANE GE SL+ R E H D L+ P VEPR ++ + I
Sbjct: 62 NFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ GFAY +GDV F V KF EYG+LS + LE +AG RV +DS K++P DF
Sbjct: 122 IELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLEQLQAGARVDIDSAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V++ Y +R FL+ HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L + A A + ++ F +M
Sbjct: 302 LNYSEDNLNQARASLERLYTSL----RGLDVTAAPAGGE-----------EYVTRFSTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L + + IN + + +E +AL +R + ++G++
Sbjct: 347 NDDFNTPEAYSVLFEMAREINRI--------KTESIEKASALGALMRELADIIGILHQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ + A ++ E + L ++ R +R +K++ +D R L +GI L D P
Sbjct: 398 PEAFLQ-GDAAGNDDEVAEIEGLIKL--RNDSRASKDWANADLARDKLNELGIVLEDGPE 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|365840758|ref|ZP_09381935.1| cysteine--tRNA ligase [Anaeroglobus geminatus F0357]
gi|364560501|gb|EHM38435.1| cysteine--tRNA ligase [Anaeroglobus geminatus F0357]
Length = 481
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 305/489 (62%), Gaps = 15/489 (3%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
+L +YNT++RK+EL KP G+V MYVCG+TPY+ SH+G+AR +VT+DV+ RYL+HLGY+
Sbjct: 3 ELTVYNTLTRKKELFKPVTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLKHLGYQ 62
Query: 135 VCYVRNFTDVDDKIIARANELGEDPI--SLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHM 192
V +++NFTDVDDKII AN GED +++ RY + + M L PRVS+HM
Sbjct: 63 VTHIQNFTDVDDKIINAAN--GEDAAWDTVANRYIASYFEVMDKLRVQRADRYPRVSEHM 120
Query: 193 PHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
II MI +++ G AY +DGD+Y+ V F YG+LS R L+D AG R+ VD RK+NP
Sbjct: 121 DDIISMIGELVKKGHAYELDGDIYYRVRSFENYGELSHRSLDDMMAGARIEVDDRKENPM 180
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DFALWKSAK GEP W+SPWG GRPGWHIECSAMS YLG FD HGGG DL+FPHHENEI
Sbjct: 181 DFALWKSAKPGEPAWDSPWGKGRPGWHIECSAMSLKYLGEPFDFHGGGSDLIFPHHENEI 240
Query: 313 AQSCAACNNS-HISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
AQ+ A C + ++YW+HNGF+TIDSEKMSKSL NFF ++ V+E Y ALR FLI HY
Sbjct: 241 AQTEACCGHGPMVNYWVHNGFITIDSEKMSKSLNNFFLVKDVLEHYSADALRYFLISNHY 300
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIP-PDTVTSINKFHNDF 430
RSP+++S +L + + + + + L LLD + S + K DF
Sbjct: 301 RSPLDFSDERLTEMTRSLERLGTAI---DNTLYLLDLPSGSGSAASAQLLNDARKAMEDF 357
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
+M DD +T + AA+ + K +N + + LA ++ + + +LG++
Sbjct: 358 EEAMCDDFNTALASAAMFELAKKLNIYKNEVVTDDVPVDASVLAEVKHIFKTMTDILGIL 417
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
++ V +K A+L D +L E R R K+Y +DAIR L+ +GI +
Sbjct: 418 EDRWNGVRGGTGDK--DYAELM-DVIL---ELRQECRAQKQYALADAIRDKLSELGITIE 471
Query: 551 DSPVGTTWR 559
DSP G W+
Sbjct: 472 DSPQGARWK 480
>gi|167837113|ref|ZP_02463996.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
gi|424903636|ref|ZP_18327149.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
gi|390931509|gb|EIP88910.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
Length = 465
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/490 (45%), Positives = 299/490 (61%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R +++ P+ G+V MYVCG+T YD HIGHAR+ V FDV+ R+LR GY V
Sbjct: 4 LRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDVVQRWLRAAGYRV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+ R+ + D L P +EPR +D +P +
Sbjct: 64 TYVRNITDIDDKIIRRAVENGETIQSLTSRFTRAMNVDFDALGVERPDIEPRATDFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++ NG+AY+ DGDV +SV KF YG+LSG+ LED RAGERVA + K++P DF
Sbjct: 124 LGMIEKLEANGYAYQAKDGDVNYSVRKFANYGKLSGKSLEDLRAGERVAANDAKEDPLDF 183
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AK +P WES +G GRPGWHIECSAM LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKRAKPQDPAGASWESKYGAGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGFV +DSEKMSKSLGNFFTIR+V+E + +R F++ THY
Sbjct: 244 IAQSEGATGQTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLEKFDAEVVRFFIVRTHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDF 430
RSP+NYS V L+ A + +Y ALKD+ P ++ H F
Sbjct: 304 RSPLNYSDVHLDDARASLTRLY---------------TALKDATPDVAPLDWSEAHARRF 348
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
A+M+DD +T V +A L + +N TR+ AL + ++ + VLGL+
Sbjct: 349 AAAMNDDFNTAVAVAVLFELATEVN---RTRE-----------PALARQLKRLAGVLGLL 394
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
E LQ A + L +++ +I R A++ K Y ++D IR +L GIAL
Sbjct: 395 GREPRE-FLQQAAGAARAGALEPEEIEAKIAARVAAKQAKNYAEADRIRAELLEAGIALE 453
Query: 551 DSPVGTT-WR 559
D P G+T WR
Sbjct: 454 DKPGGSTEWR 463
>gi|14590527|ref|NP_142595.1| cysteinyl-tRNA synthetase [Pyrococcus horikoshii OT3]
gi|6831682|sp|O58370.1|SYC_PYRHO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|3257043|dbj|BAA29726.1| 476aa long hypothetical cysteinyl-tRNA synthetase [Pyrococcus
horikoshii OT3]
Length = 476
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/484 (43%), Positives = 284/484 (58%), Gaps = 14/484 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++++E KP EG+V MYVCG T YD H+GHAR Y+ FDV+ RYL H GY V
Sbjct: 3 LRIYNTLTKQKEEFKPINEGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGYSV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
V NFTD+DDKII RA E GEDP L+ ++ + F +DM L P + PRV++H+ I
Sbjct: 63 LMVMNFTDIDDKIIRRAKETGEDPAKLAEKFIKVFLEDMKALKVKPADIYPRVTEHIEDI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I I ++ + G+AY VYF V KF EYG+LSG KLE+ R G RV KKNP DFA
Sbjct: 123 IQFIERLKEKGYAYEGSDGVYFEVQKFKEYGKLSGVKLEELRKGARVEPGEGKKNPEDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK AK GEP WESPWG GRPGWHIECS MS+ YLG SFDIHGGG DL+FPHHENEIAQS
Sbjct: 183 LWKKAKPGEPKWESPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A + + YW+H GFV + EKMSKSLGNF T+R++++ Y P +R F++ HYRSP+
Sbjct: 243 EACFGHEWVHYWLHTGFVMVKGEKMSKSLGNFVTVRELLQRYSPEVIRFFVLQKHYRSPL 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
+YS L+ A + +Y TL + A+ + A D SI + F +M
Sbjct: 303 DYSEEGLQHAKNNLERLYNTLENIRIAMENAELAYTWDENDFKAYNSIKEARRKFYEAMD 362
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T L A+ + IN + + K+++ L +T+ + +
Sbjct: 363 DDFNTAEALKAVFEVSNAINKYITEAEKPKESV-LRKAWEFFRTVGEIFGIFEEYFKEEK 421
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
+ + L I+ R RK +++E +D IR++L +GI L D
Sbjct: 422 AKEEEKLIELL-------------IQVRAELRKERKFELADKIREELRKLGIQLEDKGKE 468
Query: 556 TTWR 559
T W+
Sbjct: 469 TIWK 472
>gi|84391753|ref|ZP_00991655.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
gi|84376466|gb|EAP93345.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
Length = 461
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 303/485 (62%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RANE GE SL+ R E H D L+ P VEPR ++ + I
Sbjct: 62 NFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
++++ ++++ GFAY +GDV F V KF EYG+LS + L+ +AG RV VDS K++P DF
Sbjct: 122 VELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V++ Y +R FL+ HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L + A A + ++ F +M
Sbjct: 302 LNYSEDNLNQARASLERLYTSL----RGLDVTAAPAGGE-----------EYVTRFSTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L + + IN + + +E +AL +R + ++G++
Sbjct: 347 NDDFNTPEAYSVLFEMAREINRI--------KTESVEKASALGALMRELADIIGILHQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ + A ++ E + L ++ R +R +K++ +D R L +GI L D P
Sbjct: 398 PEAFLQ-GDAAGNDDEVAEIEALIKL--RNDSRASKDWANADLARDKLNELGIVLEDGPE 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|449144349|ref|ZP_21775164.1| cysteinyl-tRNA synthetase [Vibrio mimicus CAIM 602]
gi|449079850|gb|EMB50769.1| cysteinyl-tRNA synthetase [Vibrio mimicus CAIM 602]
Length = 459
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 300/485 (61%), Gaps = 30/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP V GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E E SL+ R +E + D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY D GDV F V K+ EYG+LS + LE +AG RV V++ K++P DF
Sbjct: 122 IALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEAAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L L S+P ++ + F A+M
Sbjct: 302 LNYSEENLNQARASLERLYNALR------------GLDRSVP---AAGGEEYLSRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L ++ L + +AL +R + V+G++ Y
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KSEDLTNASALGSLMRELADVIGIL---Y 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E + A D +Q+ I+ R +R K++ +D R L +GI L DSP
Sbjct: 396 QEPETFFQGSA---EDEEAEQIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLEDSPN 452
Query: 555 GTTWR 559
GTTWR
Sbjct: 453 GTTWR 457
>gi|288940189|ref|YP_003442429.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
gi|288895561|gb|ADC61397.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
Length = 461
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/488 (45%), Positives = 296/488 (60%), Gaps = 31/488 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++N+++R++ +P GKV MYVCG+T YD H+GHARV V FDV+YRYLR LGY+V
Sbjct: 2 LQIHNSLTRQKAPFQPIEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLRALGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y+RN TD+DDKII RANE GE +L+ R+ + +D L LPP+ EPR + H+ I
Sbjct: 62 TYIRNITDIDDKIIRRANENGEPFQALTERFIQAMREDSEALGVLPPTDEPRATAHIGEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ ++D G AY D GDVY++V +FP+YG+LSG+ D RAG RV + K++P DF
Sbjct: 122 LAMVQTLIDKGLAYVADNGDVYYAVSRFPDYGKLSGKDPADLRAGSRVEIGESKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK GEP W+SPWGPGRPGWHIECSAMS LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A ++ W+HNGFV ++ EKMSKSLGNFFT+R+++ LY P +R F++ +HYRSP
Sbjct: 242 SEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILRLYRPEEVRYFILTSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY L+ A + +Y L +P F F A+M
Sbjct: 302 LNYDDSALQKARAALTRLYTALR----------------GLPEAAPAEGEAFRARFQAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA L + + IN L G QA AA +R + LGL+
Sbjct: 346 DDDFNTPEALAVLFELAREINRL--RSDGSDQA------AAHGALLRELGAALGLLQDDP 397
Query: 495 SEVLLQLREKALKRADLTED-QVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L + AD D ++ I R AR N+++ ++D +R+ L A GI L D P
Sbjct: 398 ERYL-----RGGADADGPSDAEIEAMIAQRRAARANRDWAEADRLREALTAAGIVLEDGP 452
Query: 554 VGTTWRPA 561
GTTWR A
Sbjct: 453 QGTTWRRA 460
>gi|74317920|ref|YP_315660.1| cysteinyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
gi|109894959|sp|Q3SHN1.1|SYC_THIDA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|74057415|gb|AAZ97855.1| Cysteinyl-tRNA synthetase, class Ia [Thiobacillus denitrificans
ATCC 25259]
Length = 454
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/485 (47%), Positives = 299/485 (61%), Gaps = 35/485 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L + N+++R +E P G+V MYVCG+T YDL H+GHARV+V FD++ R+LR GY V
Sbjct: 2 LHITNSLTRTKEEFVPLSPGRVRMYVCGMTVYDLCHLGHARVFVVFDMVTRWLRASGYAV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA+E E P +L+ R+ E H+D L LPP EPR + ++ +
Sbjct: 62 EYVRNITDIDDKIIKRAHENKETPAALTERFIAEMHEDERALGVLPPDHEPRATAYVAQM 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ +I Q++D G AY + DVY+SV FP YG+LSG+ L++ RAGERV VD K++P DF
Sbjct: 122 LALIAQLVDRGLAYAAPNADVYYSVRGFPAYGRLSGKSLDELRAGERVEVDPNKRDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWG GRPGWHIECSAMSA LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGQGRPGWHIECSAMSAELLGQHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + ++YW+HNGFV +D+EKMSKSLGNFFTIR+V++ Y +R F++ HYRSP
Sbjct: 242 SEGAHGCTFVNYWLHNGFVRVDNEKMSKSLGNFFTIREVLQKYDAEIVRFFILRAHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL AA D P F +M
Sbjct: 302 LNYSDAHLDDARGALTRLY-------TALKGAPAAGPVDWDAPAAAR--------FRGAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + N R ++ AA +T+RN+ V+GL+
Sbjct: 347 DDDFNTPEAIAVLFELAAEAN-------------RGDTGAA--QTLRNLGAVIGLLQRDA 391
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
S+ L + A L ++ RI R ARK +++ +SD IR +LAA GI L D P
Sbjct: 392 SDFL----QAGTSEAGLDASEIEARIAARQAARKARDFAESDRIRDELAAAGIVLEDGPG 447
Query: 555 GTTWR 559
GTTWR
Sbjct: 448 GTTWR 452
>gi|146328731|ref|YP_001209134.1| cysteinyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
gi|166200146|sp|A5EWG6.1|SYC_DICNV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146232201|gb|ABQ13179.1| cysteinyl-tRNA synthetase class I [Dichelobacter nodosus VCS1703A]
Length = 456
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/486 (44%), Positives = 292/486 (60%), Gaps = 35/486 (7%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
+ L LYN++SR++E P V MYVCG+T YD HIGHARV V FD + R+LR GY
Sbjct: 2 SALHLYNSLSRQKEPFHPITPNHVMMYVCGMTVYDFCHIGHARVMVVFDTIARHLRASGY 61
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
++ YVRN TD+DDKII RA E E +L++R+ H+D L CLPPS+EP+ ++++
Sbjct: 62 QLTYVRNITDIDDKIIRRAAENNEPIQALTQRFINAMHEDEAALGCLPPSIEPKATEYVA 121
Query: 194 HIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
+I MI +++ AY D GDVY+SV F EYG+L+ R+LED RAGER+A++ K +P
Sbjct: 122 EMIAMIGELIAQNHAYIADNGDVYYSVRSFDEYGKLANRRLEDLRAGERIAINEAKNDPL 181
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DF LWK AK GEP WESPWG GRPGWHIECS MS LG FDIHGGGMDL FPHHE EI
Sbjct: 182 DFVLWKKAKTGEPSWESPWGAGRPGWHIECSVMSRHQLGDHFDIHGGGMDLKFPHHECEI 241
Query: 313 AQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
AQS C H++YW+HNGF+ ID+EKMSKSLGNFFT+R V++ Y +R F++ +HYR
Sbjct: 242 AQSEPVCGGKHVNYWLHNGFINIDNEKMSKSLGNFFTVRDVLKNYAGEVIRFFMLQSHYR 301
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
P+NYS LE A + +Y L ++ P + + F+A
Sbjct: 302 GPVNYSDAALEEAKRGLQRLYTAL----------------ETAPTTGGAILLPYQERFVA 345
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T +A L + K +N T+R + LGL+ T
Sbjct: 346 AMDDDFNTPQAIAVLFELAKMLNKAAAAEAADIAF-----------TLRTLAARLGLL-T 393
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
G ++ L Q ++ L+ ++ I R A+ K+Y +D+IR+ L+A+GI L DS
Sbjct: 394 GDAKTLFQ------QKGALSAAEIEAEIARRQAAKAAKDYATADSIREKLSALGIELKDS 447
Query: 553 PVGTTW 558
GT W
Sbjct: 448 ATGTQW 453
>gi|237756267|ref|ZP_04584825.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691568|gb|EEP60618.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 487
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/489 (43%), Positives = 299/489 (61%), Gaps = 7/489 (1%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++ K+E P G+V +Y CGVT YD +H+GH R + FD++ RYLR+LGY V
Sbjct: 3 LKIYNTLTGKKEDFAPIKPGEVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYLRYLGYNV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRNFTDVDDKII RA +S ++ +E+ D P VEPRV+ H+P I
Sbjct: 63 IFVRNFTDVDDKIINRAKNECLPFSVISDKFIKEYFDDAEKFRIEPADVEPRVTTHIPDI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I+ I +++D G+AY DGDVYFSV KF EYG+LS R +++ AG R+ +KK+P DFA
Sbjct: 123 INFIQKLVDAGYAYEADGDVYFSVRKFKEYGKLSKRSIDELLAGARIEPGEKKKDPLDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWKSAK GEP+WESPWG GRPGWH EC AM +LG + DIHGGG+DL FPHHENEIAQ+
Sbjct: 183 LWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPHHENEIAQA 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A YWIHNG VT++ +KMSKSLGN+ T++++ Y P LRL ++ HYRSP+
Sbjct: 243 EALTGKPFARYWIHNGLVTVNGQKMSKSLGNYITLKEIYSKYEPDILRLLVLSVHYRSPL 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
++S ++E + Y+ L + + +L+ ++++ D ++ K + F ++MS
Sbjct: 303 DFSWDKMEETKK----AYERLKNAIEEAEVLNKLPIEENFEGDLYNAVQKAQSGFYSAMS 358
Query: 436 DDLHTTVVLAALSDPLKTINDLLH--TRKGKKQAMRLESLAALEKTIRNV-LTVLGLMST 492
DD +T LA+L ++ +N L + G LES KT+ ++ + GL +
Sbjct: 359 DDFNTPEALASLFGLVREMNILRDKAIKHGGISKKALESYKEAAKTLHDIGRDIFGLFDS 418
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
V + + K + ED + IE R ARK+K++ +D IR LA GI L D+
Sbjct: 419 LQPCVKQEEIKAKEKEESINEDLIQVLIEAREKARKDKQFAIADLIRDKLAEKGIILEDT 478
Query: 553 PVGTTWRPA 561
P GT W+ A
Sbjct: 479 PFGTKWKKA 487
>gi|387126947|ref|YP_006295552.1| cysteinyl-tRNA synthetase [Methylophaga sp. JAM1]
gi|386274009|gb|AFI83907.1| Cysteinyl-tRNA synthetase [Methylophaga sp. JAM1]
Length = 436
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/464 (46%), Positives = 285/464 (61%), Gaps = 33/464 (7%)
Query: 99 MYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGED 158
MYVCG+T YDL H+GHARV V FDV+ RYLR GY+V Y+RN TD+DDKII RA E GE
Sbjct: 1 MYVCGMTVYDLCHVGHARVMVVFDVVTRYLRASGYDVTYIRNITDIDDKIIKRAAENGET 60
Query: 159 PISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVD-GDVYF 217
+L+ RY +E H D L L P EPR ++ M ++DMI ++D G AY + GDVY+
Sbjct: 61 IQTLTDRYIKEMHADADALGVLRPDREPRATEAMQPMLDMIQTLIDKGLAYVAENGDVYY 120
Query: 218 SVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPG 277
V +F YG+LSGR+++D RAGER+AV+ K +P DF LWK+AK EP W+SPWGPGRPG
Sbjct: 121 DVSEFSGYGKLSGRQVDDLRAGERIAVNEAKTDPLDFVLWKAAKPEEPAWDSPWGPGRPG 180
Query: 278 WHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDS 337
WHIECSAMSA LGH FDIHGGG DL FPHHENEIAQS A ++YW+HNGFV ID
Sbjct: 181 WHIECSAMSAECLGHHFDIHGGGQDLQFPHHENEIAQSEGAHGCQSVNYWMHNGFVRIDD 240
Query: 338 EKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLH 397
EKMSKSLGNFFT+R+V+ Y A+R F++ +HYRSP+NY+ QLE A + Y +L
Sbjct: 241 EKMSKSLGNFFTVREVLAKYPAEAVRYFILMSHYRSPLNYAEDQLEQAKTALTRFYHSLR 300
Query: 398 DCEKALSLLDAAALKDSIPPDTVT--SINKFHNDFLASMSDDLHTTVVLAALSDPLKTIN 455
D + P+TV+ +F + F +M DD +T + L+ L+D + +N
Sbjct: 301 D----------------VTPETVSWREDAEFASRFAEAMDDDFNTALALSVLADVRQALN 344
Query: 456 DLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQ 515
+K A L A + VLGL L ++ +
Sbjct: 345 IAREENDEQKSAYLAGLLLAFGE-------VLGLFQQSAEAFLTGGQQDEAGK------- 390
Query: 516 VLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWR 559
+ Q I +R AR K++ ++D +R +L A+GI L D+ T+WR
Sbjct: 391 IEQLIAERNAARAAKDWSRADQVRDELTAMGIVLEDAAGKTSWR 434
>gi|312135922|ref|YP_004003260.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
gi|311775973|gb|ADQ05460.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
Length = 465
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/482 (42%), Positives = 300/482 (62%), Gaps = 28/482 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++ +E +P +GKV MYVCG T YD HIG+AR + FD L RY + GYEV Y
Sbjct: 3 LYNTLTMTKEEFEPLEQGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEVIY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTD++DK+I RAN+ G L+ R+ +E+++D L+ + PR ++ +P +I
Sbjct: 63 IQNFTDIEDKMINRANKEGITVFELAERFIKEYYKDADRLNVKRATKNPRATEEIPDMIT 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++D G+AY VDGDVYF KF EYG+LS + +E+ AG RV + +K++P DFALW
Sbjct: 123 LIQKLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDLSEKKEDPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W SPWG GRPGWH+ECS M+ YLG + DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KAKKEGEPAWLSPWGEGRPGWHVECSVMAMKYLGETIDIHAGGQDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A +W+HNG+V I++EKMSKSLGNFFT+R+++E YHP ALRLF++ HYR P+N+
Sbjct: 243 ATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPLNF 302
Query: 378 S---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
S + Q ESA +RI+ Y+ L L+ +S S+ +F F+ +M
Sbjct: 303 SLDLIEQAESALKRIYKCYENLE------YLIRNETGSNSSNSTLKASLEQFKIKFIDAM 356
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DDL+T L + ++ IN H K + L T++ + +LG++
Sbjct: 357 EDDLNTAEATGYLFEMVREIN--THANTCSKDVLILAR-----DTLKELCGILGIL---- 405
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E+ ++ D ++L+ +E R ARK K + ++D IR +L ++G ++D+P
Sbjct: 406 --------EQYEQKEDEIPLEILELVEKRNQARKAKNFAEADRIRDELKSLGYIVLDTPQ 457
Query: 555 GT 556
GT
Sbjct: 458 GT 459
>gi|308275277|emb|CBX31873.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
Length = 413
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/416 (49%), Positives = 270/416 (64%), Gaps = 11/416 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ RK+ +P GKV MYVCG T YD HIGHAR + FDV+ +YL G EV
Sbjct: 3 LRIYNTIERKKVPFEPVQPGKVSMYVCGPTVYDSCHIGHARSVIVFDVILKYLNATGLEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRNFTDVDDKII RA +LG + ++ RY +EF++DM L+ ++EP+ ++H+ I
Sbjct: 63 TYVRNFTDVDDKIINRAVQLGIESHEVAERYIKEFYEDMDALNIKRATIEPKATEHIDKI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I +I +L AYR+DGD+Y+SVDKF +YG+LSGRKLED AG RV +D RK NP DFA
Sbjct: 123 IALIEILLKKEIAYRIDGDIYYSVDKFKDYGKLSGRKLEDMEAGARVEIDERKNNPFDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWKS K GEP+WESPWG GRPGWHIECSAMS+AYLG +FDIHGGG DL+FPHHENEIAQS
Sbjct: 183 LWKSQKPGEPYWESPWGRGRPGWHIECSAMSSAYLGETFDIHGGGKDLIFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A YW+HNGFV I+ EKMSKSLGNF I+ +++ YHP ++RLFL+ HYRSPI
Sbjct: 243 EGAFEKPFAKYWVHNGFVNINHEKMSKSLGNFLLIKDILKSYHPDSVRLFLLSNHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
+++ +E + + IY + E+ + D D + + F SM
Sbjct: 303 DFTDKAMEESEAALDKIYSAIQRVEE---------IADITGKDFINYPEGYWEKFCESMD 353
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
DD +T + L D ++ IN LL + + + ++ IR + V+G++S
Sbjct: 354 DDFNTAKGIGYLFDSVRHINRLLDENSNSDEIKTI--INSIYADIRKMGDVIGILS 407
>gi|357419735|ref|YP_004932727.1| cysteinyl-tRNA synthetase [Thermovirga lienii DSM 17291]
gi|355397201|gb|AER66630.1| cysteinyl-tRNA synthetase [Thermovirga lienii DSM 17291]
Length = 476
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/485 (41%), Positives = 302/485 (62%), Gaps = 15/485 (3%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YN ++R +E + + +GKVG+Y CG T YD HIG+AR ++ FD R+L GYEV +
Sbjct: 6 IYNDLTRTKEPLVTQKKGKVGIYTCGPTVYDYFHIGNARPFIVFDAFRRFLEAQGYEVTF 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDK+I RA ELG L+ ++ E +++D L P+V PR ++H+ II
Sbjct: 66 VQNFTDIDDKMINRAKELGITVPQLAEKFIEAYYEDADALGIKRPTVAPRATEHIDEIIS 125
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +I+ NG AY V+GDVYF V +PEYG+LS + LE+ ++G RV ++ KK+P DFALW
Sbjct: 126 LIEKIMKNGHAYVVNGDVYFDVQSYPEYGKLSKQTLEELQSGARVEINPNKKHPLDFALW 185
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ K GEP W SPWG GRPGWHIECSAM+ YLG + DIH GG DLVFPHHENEIAQ+ A
Sbjct: 186 KAKKPGEPSWPSPWGEGRPGWHIECSAMAIKYLGETIDIHTGGSDLVFPHHENEIAQAEA 245
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A + YW+HNG++ I++EKMSKSLGNF T R+ + +HP+A+RLF++ HYR+P+N+
Sbjct: 246 ATGKPFVKYWMHNGYLMINAEKMSKSLGNFLTAREARKKFHPVAIRLFMLSAHYRTPLNF 305
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
SV L ++++ + + +C L + +IN F +++ DD
Sbjct: 306 SVENLINSAKGA----ERIRNCWNELLNAEERCYDSGTSMGETETINSLKEKFDSNLKDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T + L + +K +N +L K ++S AL + +L ++ + +T +E
Sbjct: 362 FNTAGAIGVLFEAVKIVNQVLKGNNFDKNF--IDSAKALMRYADEILGIIDINNTLKAEN 419
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
+ +L E+ + + I +R ARK + + K+D IR L+++GI L D+P GT
Sbjct: 420 ---------ESTELNEELINELIREREEARKQRNFAKADEIRDKLSSMGIVLEDTPSGTR 470
Query: 558 WRPAL 562
W+ AL
Sbjct: 471 WKRAL 475
>gi|269960838|ref|ZP_06175209.1| cysteinyl-tRNA synthetase [Vibrio harveyi 1DA3]
gi|424032917|ref|ZP_17772333.1| cysteine--tRNA ligase [Vibrio cholerae HENC-01]
gi|269834502|gb|EEZ88590.1| cysteinyl-tRNA synthetase [Vibrio harveyi 1DA3]
gi|408875278|gb|EKM14429.1| cysteine--tRNA ligase [Vibrio cholerae HENC-01]
Length = 460
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/489 (44%), Positives = 297/489 (60%), Gaps = 37/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R E H D L+ P VEPR + + I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY D GDV F V KF EYG+LS + L+ +AG RV +++ K++P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L A A + ++ F A+M
Sbjct: 302 LNYSEDNLNQARASLERLYTSL----RGLDLNAAPAGGE-----------EYVTRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L + LE + L +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KTENLEKASELGALMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L +A + D +D + IE R +R K++ +D R L +GI L
Sbjct: 393 ---ILHQDPEAFLKGDAGDDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLE 449
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 450 DGPEGTTWR 458
>gi|146295747|ref|YP_001179518.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|187629798|sp|A4XHE2.1|SYC_CALS8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145409323|gb|ABP66327.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 465
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/480 (43%), Positives = 301/480 (62%), Gaps = 24/480 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++ +E +P EGKV MYVCG T YD HIG+AR + FD L RY + GYEV Y
Sbjct: 3 LYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEVIY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTDV+DK+I RAN+ G L+ R+ +E+++D L+ + PR ++ + +I
Sbjct: 63 IQNFTDVEDKMINRANKEGITVFELAERFIQEYYKDADRLNVRRATKSPRATEEIEDMIA 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++D G+AY VDGDVYF KF EYG+LS + +ED AG RV +K++P DFALW
Sbjct: 123 LIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEDLMAGARVDPSEKKEDPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W SPWG GRPGWHIECS M+ YLG + DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KAKKEGEPAWNSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A +W+HNG+V I++EKMSKSLGNFFT+R+++E YHP ALRLF++ HYR P+N+
Sbjct: 243 ATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPLNF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV-TSINKFHNDFLASMSD 436
S+ +E A + IY C + L L A S D + +I + F+ +M D
Sbjct: 303 SIDLIEQAEVALKRIYT----CYENLEFLIQNAASSSENDDKLKAAIEELKAKFIDAMED 358
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
DL+T L + ++ IN H K E+L + ++ + ++LG++ YS
Sbjct: 359 DLNTAEATGYLFEMVREIN--THANSCSK-----ETLTFAKDILKELCSILGILEQ-YS- 409
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
+E+A+ + ++L+ +E R ARK K + ++D IR +L ++G ++D+P GT
Sbjct: 410 ----AKEEAIPQ------EILELVEKRNQARKAKNFLEADRIRDELKSLGYIVLDTPQGT 459
>gi|407892682|ref|ZP_11151712.1| cysteinyl-tRNA ligase [Diplorickettsia massiliensis 20B]
Length = 470
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/485 (43%), Positives = 303/485 (62%), Gaps = 21/485 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++++E KP + G+V +YVCG+T YDL HIGHARV V FDV+ RYL++ G V
Sbjct: 2 LKIYNTLTQQKETFKPLIAGQVSLYVCGMTVYDLCHIGHARVLVAFDVIVRYLKNRGLSV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y+RN TD+DDKII RA E E L+ R E H+D L+ +PP+ EP+ ++ + I
Sbjct: 62 KYIRNITDIDDKIIQRAQENHESITELTTRMIEAMHEDFAQLNLMPPTQEPKATESIAEI 121
Query: 196 IDMITQILDNGFAYRVDG-DVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I +I +LD G AY+ + D+++++D F YG L+ + LE R G RVAV+ K++P DF
Sbjct: 122 IQLIQILLDKGVAYQAENRDIFYAIDTFKTYGALAHQDLEKLRHGSRVAVELNKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK EP WESPWGPGRPGWHIECSAMS A LG FDIHGGG+DLVFPHH+NEIAQ
Sbjct: 182 VLWKAAKPNEPSWESPWGPGRPGWHIECSAMSMAALGEQFDIHGGGLDLVFPHHQNEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + WIH GFV ++ +KMSKSLGNFFT+R ++ Y +R FL+ +HYRSP
Sbjct: 242 SEAATDKKFVQTWIHVGFVQVNRQKMSKSLGNFFTLRDMLAEYPAEVVRYFLMASHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTS-INKFHNDFLAS 433
I+YS L+ A + +Y TL + + A+ I D++T+ ++ + F A+
Sbjct: 302 IHYSQENLQLAQAALQRLYTTLFEVDNL-----GASGHPEINQDSLTTLLSSYEESFQAA 356
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T LA L I+ + T K + + ++ TVLG++
Sbjct: 357 MDDDFNTPEALAVLFVMTHEIHRIKATDPNKA--------ILIAQVLKKQATVLGILQQN 408
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + +++ D + + L I+ R AR K+++ +DAIR++L +GIAL D+P
Sbjct: 409 PKDFL----KSGVQQIDSAKIESL--IQAREKARAGKDWKTADAIRQELEQMGIALKDTP 462
Query: 554 VGTTW 558
G+ W
Sbjct: 463 QGSDW 467
>gi|319775019|ref|YP_004137507.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|329123076|ref|ZP_08251646.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
gi|317449610|emb|CBY85816.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|327471631|gb|EGF17073.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
Length = 459
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/488 (45%), Positives = 292/488 (59%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGSRIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y AL+ + V F F +M
Sbjct: 302 LNYSEENLNLAQGALERLY---------------TALRGTDQSAVVFGGENFVETFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + IN L + +E L +R + +LGL
Sbjct: 347 DDDFNTPNALSVLFEMAREINKL--------KTEDVEKANGLAARLRELGAILGL----- 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
L Q EK L+ A +D+V + I+ R AR K++ +DA R +L A+GI L D
Sbjct: 394 ---LQQDPEKFLQ-AGSDDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMGIVLED 449
Query: 552 SPVGTTWR 559
GTTWR
Sbjct: 450 GANGTTWR 457
>gi|91226019|ref|ZP_01260946.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 12G01]
gi|269968727|ref|ZP_06182720.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 40B]
gi|91189460|gb|EAS75737.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 12G01]
gi|269826654|gb|EEZ80995.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 40B]
Length = 460
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/489 (44%), Positives = 297/489 (60%), Gaps = 37/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R E H D L+ P VEPR + + I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY D GDV F V KF EYG+LS + L+ +AG RV +++ K++P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L A A + ++ + F A+M
Sbjct: 302 LNYSEDNLNQARASLERLYTSL----RGLDLNAAPAGGE-----------EYVSRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L + LE + L +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KTENLEKASELGALMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L +A + D D + IE R +R K++ +D R L +GI L
Sbjct: 393 ---ILHQDPEAFLKGDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLE 449
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 450 DGPEGTTWR 458
>gi|452747914|ref|ZP_21947703.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri NF13]
gi|452008063|gb|EME00307.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri NF13]
Length = 461
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/487 (46%), Positives = 291/487 (59%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E +P + KV MYVCG+T YD HIGHARV + FDV+ R+LRH GY+V
Sbjct: 3 LSIYNTLTKTKEAFRPLEDNKVRMYVCGMTVYDFCHIGHARVMIAFDVVTRWLRHRGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA+E GE +L R H+D L+ L P +EPR +DH+ +
Sbjct: 63 TYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDETRLNVLRPDIEPRATDHIAGM 122
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D GFAY +GDVY+ V KF YG+LS RK+ED + G R+ VD K++P DF
Sbjct: 123 HTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKQDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W+SPWG GRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 183 VLWKGAKPGEPSWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 243 SEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P ++F F A+M
Sbjct: 303 INYSEDSLREAKSALERFYNGLK----------------GLPEAQPAGGDEFVARFAAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L + ++ +N L + +LAA K + +VL VL L +
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLRES-----DLPAAAALAARLKELADVLGVLQLEPETF 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D TE + L I R AR K + +SD IR L A+G+ L D
Sbjct: 402 ------LQAGAAGKVDATEVEAL--IAARLTARAEKNWAESDRIRDQLTAMGVVLEDGKG 453
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 454 GTTWRLA 460
>gi|171463666|ref|YP_001797779.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|229470557|sp|B1XUY8.1|SYC_POLNS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|171193204|gb|ACB44165.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 473
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/499 (45%), Positives = 301/499 (60%), Gaps = 40/499 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+SR +++ KP V GKV MYVCG+T YD HIGHARV + FD++ R+LR GYEV
Sbjct: 2 LQIYNTLSRSKQVFKPIVPGKVKMYVCGMTVYDFCHIGHARVMIVFDMVVRWLRASGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R+ + H D +L + P EPR +D++ +
Sbjct: 62 LYVRNITDIDDKIINRAIENGEPISALTNRFVDAMHADSDELGLMHPDQEPRATDYIAQM 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++++N AY+ DGDV F+V P YGQLSG+ L++ AGERVAV K++P DF
Sbjct: 122 QGMIGKLIENELAYQANDGDVNFAVRLLPRYGQLSGKTLDELNAGERVAVGDGKRDPLDF 181
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWKSAK EP W+SPWG GRPGWHIECSAMS LG FDIHGGG DL FPHHENE
Sbjct: 182 VLWKSAKPEEPADTRWKSPWGEGRPGWHIECSAMSCDLLGEHFDIHGGGADLQFPHHENE 241
Query: 312 IAQSCAAC--------NNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALR 363
IAQS A + ++YW+HNG + ++ EKMSKSLGNFF IR V++ + P +R
Sbjct: 242 IAQSEGALYGKDRKVDDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVLKSFDPEVIR 301
Query: 364 LFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSI 423
F++ THYRSPINYS QLE A + +Y L KA ++ ++ S
Sbjct: 302 FFMLKTHYRSPINYSDAQLEEARSGLVRLYTALAQGSKAQTI-------------SLGSS 348
Query: 424 NKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNV 483
N + F +M+DD +T +A L D + +N + Q + LA + K +
Sbjct: 349 NPWAKRFADAMNDDFNTPEAIAVLFDIVSEVN--------RAQGEEKQVLANILKALGAS 400
Query: 484 LTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLA 543
L L T + L+ A +A L+ +Q+ ++I R A++ K++ K+DAIRK L
Sbjct: 401 LNFLQRDPTVF------LQSSAKDQAGLSPEQIEEQIAARVAAKQAKDFAKADAIRKALL 454
Query: 544 AVGIALMDSPVG-TTWRPA 561
GI L D P G T WR A
Sbjct: 455 EQGIVLEDKPGGLTGWRRA 473
>gi|407071860|ref|ZP_11102698.1| cysteinyl-tRNA ligase [Vibrio cyclitrophicus ZF14]
Length = 461
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/489 (45%), Positives = 297/489 (60%), Gaps = 36/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RANE GE SL+ R E H D L+ P VEPR ++ + I
Sbjct: 62 NFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ GFAY +GDV F V KF EYG+LS + L+ +AG RV VDS K++P DF
Sbjct: 122 IELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L A A + ++ F +M
Sbjct: 302 LNYSEDNLNQARASLERLYTSL----RGLDLTAAPAGGE-----------EYVTRFSTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L + + IN + + +E +AL +R + ++G
Sbjct: 347 NDDFNTPEAYSVLFEMARDINRI--------KTESIEKASALGALMRELADIIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L Q E LK D + IE R +R +K++ +D R L +GI L
Sbjct: 393 --ILHQDPEAFLKGDAAGNDDEVAEIEALIKLRNDSRASKDWANADLARDKLNELGIVLE 450
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 451 DGPEGTTWR 459
>gi|392541321|ref|ZP_10288458.1| cysteinyl-tRNA synthetase [Pseudoalteromonas piscicida JCM 20779]
Length = 459
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/492 (45%), Positives = 292/492 (59%), Gaps = 40/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++ KP EGKV MYVCG+T YD H+GHAR YV+FDV+ RYLR+LGY+V
Sbjct: 2 LQIFNTLTRQKAPFKPLKEGKVDMYVCGITIYDFCHVGHARTYVSFDVMNRYLRYLGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R + H+D L+ LP +EP V+ HM I
Sbjct: 62 TYVRNITDVDDKIIKRAAENNESINDLTVRMTKAMHEDFTALNMLPADIEPTVTGHMDEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+MI ++++ G AY DGDV F V F +YGQLS + LE +AG RV V K +P DF
Sbjct: 122 IEMIARLIEKGHAYVAKDGDVLFDVSTFEQYGQLSQQDLEMLQAGARVEVAQDKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W+SPWG GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPAWQSPWGEGRPGWHIECSAMSSKHLGEFFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++ WIH G V ++ EKMSKSLGNFFT+R+V++ + +R FLI HYRS
Sbjct: 242 SCCANNGRYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLKAFDRETVRYFLINGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS LE A + IY L E L LK N + F +M
Sbjct: 302 LNYSQENLEQARSSLERIYTALRGVE-----LVEIELKG----------NAYAERFETAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD +T L + + K +N L + + + A L LA +LG+
Sbjct: 347 NDDFNTPEALPVIFELSKEVNRLKDSDAKAAGEHAFILVKLA----------EILGIA-- 394
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
Q ++ + + +D+V Q IE R AR+NK++ +D R L A+G+ L
Sbjct: 395 -------QQDPESFLQGEQDDDEVAQIEALIEKRRSARENKDWAAADEARDALTALGVVL 447
Query: 550 MDSPVGTTWRPA 561
DS TTWR A
Sbjct: 448 EDSAGKTTWRKA 459
>gi|262373040|ref|ZP_06066319.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
gi|262313065|gb|EEY94150.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
Length = 473
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/488 (45%), Positives = 305/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG++ MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKIIARANE GE L+ R+ E ++D +L C P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIARANENGESIQQLTARFIEAMNEDAANLGCAAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI+ ++D G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MISNLVDKGAAYPASNGDVYFEVTKFDKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ AL S + +F+N +M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFKAYQQTYGQKTVDALDQSF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + E L T+R + +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQA-------EQATVLYSTLRQLTNILGLVQHDV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L + ++AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DEFLKSDIGQEALT---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLDQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTIWRRA 472
>gi|78044929|ref|YP_361143.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
Z-2901]
gi|109894889|sp|Q3A9P1.1|SYC_CARHZ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|77997044|gb|ABB15943.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 465
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/485 (44%), Positives = 297/485 (61%), Gaps = 27/485 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+++ +E P+ GKV MYVCG T Y+ HIG+AR V FD + RY + G+EV Y
Sbjct: 3 IYNTLTKTKEEFIPREPGKVYMYVCGPTTYNYIHIGNARPIVFFDTVRRYFEYKGFEVIY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDKII RA E G PI L ++Y E+ +D L +V P+V++H+P II+
Sbjct: 63 VQNFTDIDDKIINRALEEGISPIELGQKYIIEYFKDADRLGVKRATVHPKVTEHIPEIIE 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
M+ +++ G+AY V+G+VYF+VD F +YG+LSGR LE+ +AG RV VD +KKNP DFALW
Sbjct: 123 MVKGLIEKGYAYEVEGNVYFAVDSFSDYGKLSGRDLEELKAGARVEVDEKKKNPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K AK GEP+WESPWGPGRPGWHIECSAMS YLG +FDIHGGG DLVFPHHENE+AQS A
Sbjct: 183 KKAKPGEPYWESPWGPGRPGWHIECSAMSLKYLGENFDIHGGGADLVFPHHENEVAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
YW+HNGF+T++ EKMSKSLGNFF +R+++E + +R FL+ THYRSP+++
Sbjct: 243 FTGKPFARYWMHNGFITVNQEKMSKSLGNFFLVREILEKFPGRVVRFFLLSTHYRSPLDF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
+L A + + + + ++ L A + + I F DF +M DD
Sbjct: 303 DDKKLNEAKAALERVDNFVQNLKEVNPLPGEARI------EIQEKITNFLRDFNEAMEDD 356
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T +A+L + + R G Q A +K L V Y++V
Sbjct: 357 FNTAQAMASLFELV---------RFGNTQIASGNLTAGDKKLFEEALNV-------YTQV 400
Query: 498 L---LQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ EK + D+T V IE R +K K+Y+ +D IR +L GI L D+P
Sbjct: 401 FGIEFGVLEK-IAGEDIT-PFVELLIEVRARLKKEKKYDLADFIRDELKKQGIILEDTPK 458
Query: 555 GTTWR 559
G W+
Sbjct: 459 GVRWK 463
>gi|406892373|gb|EKD37740.1| hypothetical protein ACD_75C01015G0004 [uncultured bacterium]
Length = 490
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/485 (42%), Positives = 290/485 (59%), Gaps = 8/485 (1%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
++NT+S K+E ++ G V +YVCG+T YD HIGHAR + FD++ YL+ G++V Y
Sbjct: 5 IHNTLSGKKETLQTLEPGHVKLYVCGITSYDYCHIGHARSALAFDMIVNYLKFRGHKVTY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTD+DDKIIARA E L+ R+ EF+ DM L P +EP+ ++H+ +I
Sbjct: 65 VRNFTDIDDKIIARAAEQQTSAEELAARFIREFYVDMDKLGINRPDIEPKATEHISEMIA 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++ G AY DVY+ VD FP+YG+LS R +ED +AG R++++ +K+NP DF LW
Sbjct: 125 LIEELISKGKAYPSGNDVYYIVDSFPDYGKLSKRNVEDMQAGARISINEQKRNPLDFVLW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K +K GEP WESPWGPGRPGWHIECSAMS YLG +FDIHGGG DL+FPHHENEIAQS
Sbjct: 185 KGSKPGEPTWESPWGPGRPGWHIECSAMSRKYLGETFDIHGGGQDLIFPHHENEIAQSEG 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ + WIH+GFVTI EKMSKSLGNF TIR ++ YHP LR F+ THYR+P+++
Sbjct: 245 VHGKAFANLWIHHGFVTIRDEKMSKSLGNFLTIRDILTHYHPEVLRFFIFSTHYRNPLDF 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLD---AAALKDSIPPDTVTS-INKFHNDFLAS 433
S ++ A+ + + L++C A+ LD + A SI D + + F +
Sbjct: 305 SESAMQDATAGL----ERLYECVAAVDRLDPQKSGANVASIFTDNDRQLLESMESRFQQA 360
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M +D +T D +KTIN + A +E L +R + ++G++
Sbjct: 361 MDNDFNTAQAQGIFFDTVKTINRICRALPAVPSASDVEFLKKCANNLRKLADIMGILRED 420
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L + K + L + + I +R R K + +SD IR L A I L D P
Sbjct: 421 AESFLAAGKNKMISEGGLDVNAIEALIAERNQCRSAKNWARSDEIRDLLLAQNIELKDGP 480
Query: 554 VGTTW 558
GTTW
Sbjct: 481 NGTTW 485
>gi|422009692|ref|ZP_16356675.1| cysteinyl-tRNA ligase [Providencia rettgeri Dmel1]
gi|414093510|gb|EKT55182.1| cysteinyl-tRNA ligase [Providencia rettgeri Dmel1]
Length = 462
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/490 (44%), Positives = 297/490 (60%), Gaps = 37/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FD + RYLR+LGY++
Sbjct: 2 LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E L+ R E H+D L+ L P EPR + H+ I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIGEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY +GDV F V P YG LS + LE +AG RV V K+NP DF
Sbjct: 122 IELTQSLIERGHAYVAANGDVMFEVKTDPNYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP WESPWG GRPGWHIECSAM++ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSL NFFTIR V+E Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + +Y L +K+ ++P ++F F+ +M
Sbjct: 302 LNYTEENLKQARTALERMYTALRGTDKS-----------AVPAGG----DEFKARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D ++ +N L ++ + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMVREVNRL--------KSEDMSAANAMAAQLRELAGVLGLLE--- 395
Query: 495 SEVLLQLREKALKRADLTED-----QVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
Q E LK TED ++ I+ R AR+NK++ ++DA R +L A+G+ L
Sbjct: 396 -----QDPESFLKGGAQTEDDAEVAKIEALIQQRLDARQNKDWAQADAARDELTAMGVVL 450
Query: 550 MDSPVGTTWR 559
D GTTWR
Sbjct: 451 EDGATGTTWR 460
>gi|114563765|ref|YP_751278.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
gi|122299286|sp|Q07ZX5.1|SYC_SHEFN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|114335058|gb|ABI72440.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
Length = 460
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/489 (46%), Positives = 299/489 (61%), Gaps = 37/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN++SR ++ KP GK+GMYVCGVT YDL HIGH R +V+FD++ RYLR++GYEV
Sbjct: 2 LKIYNSISRDKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYIGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ RN TDVDDKII RA E E SL+ R E HQD L+ P EPR + H+ I
Sbjct: 62 NFQRNITDVDDKIIKRAAENNESCESLTERLIAEMHQDFDALNMKRPDFEPRATLHIEEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDM+ ++LD AY +GDV FSV FPEYGQLSG+ L+ +AG RV +D+ K+NP DF
Sbjct: 122 IDMVQRLLDRDHAYVASNGDVLFSVASFPEYGQLSGQNLDQLQAGARVEIDNAKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +D EKMSKSL NFFTIR V++ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLDNFFTIRDVLKHYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L K L L AA ++ F F ++M
Sbjct: 302 LNYSEDNLKQARAALERLYTAL----KGLDLTVDAAPAEA-----------FVAKFKSAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L + ++ IN L T + +AL +++ + VLGL+S
Sbjct: 347 DDDFNTPEAYSVLFEMVREINRLKTT--------DMAEASALGVSLKQLADVLGLISQ-- 396
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+A + + ++D+V + I +R AR K++ +D R L +G+ L D
Sbjct: 397 -------TPEAFFKGEGSDDEVAEIEALIVERNRARTEKDWPAADVARDRLNELGVELED 449
Query: 552 -SPVGTTWR 559
P GTTWR
Sbjct: 450 GGPSGTTWR 458
>gi|334143779|ref|YP_004536935.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
gi|333964690|gb|AEG31456.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
Length = 458
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/487 (44%), Positives = 301/487 (61%), Gaps = 32/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT +R++E+ KP V GKVGMYVCGVT YD HIGHARV V FD + R++R G EV
Sbjct: 3 LHIYNTETRQKEVFKPIVPGKVGMYVCGVTVYDYCHIGHARVMVVFDTVVRHMRARGLEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E SL+ R+ H+D L+ L P +EP+ +D +P I
Sbjct: 63 KYVRNITDIDDKIIKRALENQESVQSLTERFITAMHEDETALNILRPDIEPKATDFIPEI 122
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
++ +++ G AY +GDVYF V F YG+LSG+K ++ AG RV V+ K++P DF
Sbjct: 123 QQLVNTLIEKGHAYAATNGDVYFKVKSFESYGRLSGKKQDELEAGARVEVNPNKQDPMDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK++K EP W+S WG GRPGWHIECSAMS + +G DIHGGGMDL FPHHENEIAQ
Sbjct: 183 VLWKASKANEPAWDSAWGQGRPGWHIECSAMSGSCIGERLDIHGGGMDLQFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A +++ W+H GFV +D+EKMSKSL NFFTIR+V++ YHP +R FL+ +HYRSP
Sbjct: 243 SECAHGEHYVNTWMHVGFVRVDNEKMSKSLNNFFTIREVLKDYHPEVIRYFLLSSHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY++ L+ A + +Y + L+AA +I P V +F F +M
Sbjct: 303 LNYTIENLDIAKTNLARLY----------TALEAA----TIQPGLVAVGTEFEAKFNDAM 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + +K +N K Q L L ++++ LGL+ T
Sbjct: 349 DDDFNTPQAMAVLFELVKEVN--------KTQQPELVGL------LQSLANRLGLL-TET 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E + + + L+++ + I +RT AR +K + +SD IR DL A G+ L+DS
Sbjct: 394 PEFF--FKSQVGQPDGLSDEAIEALIVERTQARADKNWARSDEIRDDLLAKGVELLDSKE 451
Query: 555 GTTWRPA 561
GT+WR A
Sbjct: 452 GTSWRRA 458
>gi|156974130|ref|YP_001445037.1| cysteinyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
gi|388600078|ref|ZP_10158474.1| cysteinyl-tRNA ligase [Vibrio campbellii DS40M4]
gi|156525724|gb|ABU70810.1| hypothetical protein VIBHAR_01842 [Vibrio harveyi ATCC BAA-1116]
Length = 460
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/489 (44%), Positives = 297/489 (60%), Gaps = 37/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R E H D L+ P VEPR + + I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY D GDV F V KF EYG+LS + LE +AG RV +++ K++P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLEQLQAGARVDIETAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L A A + ++ + + A+M
Sbjct: 302 LNYSEDNLNQARASLERLYTSL----RGLDLNAAPAGGE-----------EYVSRYTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L + LE + L +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KTENLEKASELGALMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L +A + D D + IE R +R K++ +D R L +GI L
Sbjct: 393 ---ILHQDPEAFLKGDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLE 449
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 450 DGPEGTTWR 458
>gi|375265152|ref|YP_005022595.1| cysteinyl-tRNA synthetase [Vibrio sp. EJY3]
gi|369840473|gb|AEX21617.1| cysteinyl-tRNA synthetase [Vibrio sp. EJY3]
Length = 460
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 301/485 (62%), Gaps = 29/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R E H D L+ P VEPR + + I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFITEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY D GDV F V KF EYG+LS + L+ +AG RV +++ K++P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L A P +++F N +M
Sbjct: 302 LNYSEDNLNQARASLERLYTSL----RGLDLKAA-------PAGGEEYVSRFTN----AM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L + +E + L +R + V+G++ Y
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KTESVEKASELGALMRELADVIGIL---Y 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L+ A ++ E + L ++ R +R +K++ +D R L +GI L D P
Sbjct: 396 QDPEAFLKGDAGNDDEVAEIEALIKL--RNDSRASKDWANADMARDKLTEMGIVLEDGPE 453
Query: 555 GTTWR 559
GTTWR
Sbjct: 454 GTTWR 458
>gi|409202160|ref|ZP_11230363.1| cysteinyl-tRNA synthetase [Pseudoalteromonas flavipulchra JG1]
Length = 459
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/492 (45%), Positives = 292/492 (59%), Gaps = 40/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++ KP EGKV MYVCG+T YD H+GHAR YV+FDV+ RYLR+LGY+V
Sbjct: 2 LQIFNTLTRQKAPFKPLKEGKVDMYVCGITIYDFCHVGHARTYVSFDVMNRYLRYLGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R + H+D L+ LP +EP V+ HM I
Sbjct: 62 TYVRNITDVDDKIIKRAAENKESINDLTVRMTKAMHEDFTALNMLPADIEPTVTGHMDEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+MI ++++ G AY DGDV F V F +YGQLS + LE +AG RV V K +P DF
Sbjct: 122 IEMIVRLIEKGHAYVAKDGDVLFDVSTFEQYGQLSQQDLEMLQAGARVEVAQDKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W+SPWG GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPAWQSPWGEGRPGWHIECSAMSSKHLGEFFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++ WIH G V ++ EKMSKSLGNFFT+R+V++ + +R FLI HYRS
Sbjct: 242 SCCANNGRYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLKAFDRETVRYFLINGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS LE A + IY L E L LK N + F +M
Sbjct: 302 LNYSQENLEQARSSLERIYTALRGVE-----LVEVELKG----------NAYVERFETAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD +T L + + K +N L + + + A L LA VLG+
Sbjct: 347 NDDFNTPEALPVIFELSKEVNRLKDSDAKAAGEHAFILVKLA----------EVLGIA-- 394
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
Q ++ + + +D+V Q IE R AR+NK++ +D R L A+G+ L
Sbjct: 395 -------QQDPESFLQGEQDDDEVAQIEALIEKRRSARENKDWAAADEARDALTALGVVL 447
Query: 550 MDSPVGTTWRPA 561
DS TTWR A
Sbjct: 448 EDSAGKTTWRKA 459
>gi|256823180|ref|YP_003147143.1| cysteinyl-tRNA synthetase [Kangiella koreensis DSM 16069]
gi|256796719|gb|ACV27375.1| cysteinyl-tRNA synthetase [Kangiella koreensis DSM 16069]
Length = 465
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/491 (45%), Positives = 293/491 (59%), Gaps = 36/491 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN ++R++E KP EGKV MYVCGVT YDL HIGHAR Y FDV+ R+L+ GY+V
Sbjct: 2 LQIYNNLTRQKEPFKPMEEGKVSMYVCGVTTYDLCHIGHARTYAAFDVINRFLKFSGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GED L+ R+ +E +QD + P +EPR + M I
Sbjct: 62 TYVRNITDIDDKIINRANENGEDFSELTERFIQEMYQDFDAIGLQRPDIEPRATQTMDEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M +++ G AY D GDVYF V F +YG+LS + L AGERV V+ KK+P DF
Sbjct: 122 IQMTQTLIEKGAAYATDNGDVYFHVPAFKDYGKLSKQDLTQLNAGERVDVNDIKKDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWKS+K GEP W+SPWG GRPGWHIECSAMS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKSSKPGEPSWDSPWGKGRPGWHIECSAMSKKCLGDTFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + + WIH G V +D EKMSKSLGNFFTIR V++ Y P ++R FL+ HYRS
Sbjct: 242 SECANDCTFARVWIHTGMVQVDKEKMSKSLGNFFTIRDVLKQYRPESVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLH--DCEKA----LSLLDAAALKDSIPPDTVTSINKFHN 428
++Y+ LESA + +Y +L D +A L +L+ A L+
Sbjct: 302 LSYTQANLESADASLERLYTSLRGVDFNRATDDKLGILEQAQLR---------------- 345
Query: 429 DFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLG 488
F +M DD + + L D K +N L +A + + A + I+ + VL
Sbjct: 346 -FTEAMDDDFNVPEAMPVLFDLAKEVNRL--------KATDMATAATIAVKIKELAGVLS 396
Query: 489 LMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIA 548
L+ L + +D++++ + I+ R AR +K ++ +D IR L A+ I
Sbjct: 397 LLQQDPESFL----KSGAGDSDVSDEDIDSLIQQRLQARADKNWDLADEIRDKLHAMNIE 452
Query: 549 LMDSPVGTTWR 559
L D+ GT+WR
Sbjct: 453 LEDAAGGTSWR 463
>gi|218709995|ref|YP_002417616.1| cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
gi|254781698|sp|B7VGZ1.1|SYC_VIBSL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218323014|emb|CAV19191.1| Cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
Length = 461
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 302/485 (62%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RANE GE SL+ R E H D L+ P VEPR ++ + I
Sbjct: 62 NFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ GFAY +GDV F V KF EYG+LS + L+ +AG RV +DS K++P DF
Sbjct: 122 IELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDIDSAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V++ Y +R FL+ HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L + A A + ++ F +M
Sbjct: 302 LNYSEDNLNQARASLERLYTSL----RGLDVTAAPAGGE-----------EYVTRFSTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L + + IN + + +E +AL +R + ++G++
Sbjct: 347 NDDFNTPEAYSVLFEMAREINRI--------KTESIEKASALGALMRELADIIGILHQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ + A ++ E + L ++ R +R +K++ +D R L +GI L D P
Sbjct: 398 PEAFLQ-GDAAGNDDEVAEIEGLIKL--RNDSRASKDWANADLARDKLNELGIVLEDGPE 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|414070586|ref|ZP_11406569.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
gi|410807040|gb|EKS13023.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
Length = 459
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/485 (45%), Positives = 292/485 (60%), Gaps = 30/485 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E KP VEGK+ MYVCG+T YD HIGHAR +V FDV+ RYLRH+GY++ Y
Sbjct: 4 IYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDLKY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L+ R + H+D L+ L P +EP V+ HM II
Sbjct: 64 VRNITDIDDKIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEIIV 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
M+ ++++ G AY DGDV F V F +YG LS + L ++G RV V K +P DF L
Sbjct: 124 MVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK GEP W SPWG GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHENEIAQSC
Sbjct: 184 WKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQSC 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A N +++ WIH G V ++ EKMSKSL NFFT+R+V++ Y ++R FLI HYRS +N
Sbjct: 244 CANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDAESVRYFLISGHYRSQLN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L+ A + IY L D E P + N+F F +M D
Sbjct: 304 YSQENLDQARSSLERIYTALRDVE---------------PVECDLEGNEFVAKFRKAMDD 348
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T L L + K +N R + ++ LA + ++I NVL V + E
Sbjct: 349 DFNTPEALPVLFELAKELN-----RVKESDVVQAGQLAFILRSIGNVLGV----AQQAPE 399
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
LQ + + A + E +++R E AR +K++ +D R L A+G+ L DS T
Sbjct: 400 AFLQGGQDDGEVATI-EALIVKRNE----ARTSKDWAAADEARDALNALGVILEDSAGKT 454
Query: 557 TWRPA 561
TWR A
Sbjct: 455 TWRKA 459
>gi|400288066|ref|ZP_10790098.1| cysteinyl-tRNA ligase [Psychrobacter sp. PAMC 21119]
Length = 486
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/495 (44%), Positives = 304/495 (61%), Gaps = 17/495 (3%)
Query: 70 ASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLR 129
A A L Y++++ ++ +P GKVGMYVCG+T YD HIGHAR+ V +DV+ R+LR
Sbjct: 6 AKARLGLTNYDSLTASKQYFEPLDAGKVGMYVCGMTIYDYCHIGHARIMVAYDVISRWLR 65
Query: 130 HLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVS 189
LGYEV YVRN TD+DDKII RA E E L+ R+ H D + L C+PP+ EPR +
Sbjct: 66 QLGYEVNYVRNITDIDDKIINRAAENNEPINELTERFITAMHDDELALGCIPPNQEPRAT 125
Query: 190 DHMPHIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRK 248
D++ + D+I ++ +AY + GDVY++VD F YG+LS R L++ +AG RV V++ K
Sbjct: 126 DYIDEMQDIIETLVAGSYAYAGNKGDVYYAVDSFAGYGKLSKRNLDEMQAGSRVEVENDK 185
Query: 249 KNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHH 308
+NP DF LWK+AK GEP W SPWG GRPGWHIECSAMS LG++FDIHGGG DL FPHH
Sbjct: 186 RNPFDFVLWKAAKPGEPQWASPWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQFPHH 245
Query: 309 ENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIG 368
ENEIAQS A+ + W+H GF+ +D EKMSKSLGNFFTIR VM YH +R FL+
Sbjct: 246 ENEIAQSEASTGCKYARNWMHVGFINVDGEKMSKSLGNFFTIRDVMAKYHSETVRYFLLS 305
Query: 369 THYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHN 428
+HYRS +N+S V L+ A + +Y TL E+ + + + D +S +
Sbjct: 306 SHYRSQVNFSDVALDEAHNSLSRLYNTLKIAEQQKG--QTLEINEHLINDAYSSDAGYF- 362
Query: 429 DFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLG 488
F+ +M+DD +T+ + L + IN + + + K + L AL + VL
Sbjct: 363 -FIQAMNDDFNTSAATSVLFGLARDINKAIKSEEVDKAWQWAQQLKALAQ-------VLN 414
Query: 489 LMSTGYSEVLLQLREKALKRAD--LTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVG 546
++ S+ L + A +AD LT+ + I +R A+ NK++ ++D +R+ L A G
Sbjct: 415 ILQQPVSQFLQAV---AGDQADDGLTDAVIDGLIIERAEAKANKDFTRADEVREQLKAAG 471
Query: 547 IALMDSPVGTTWRPA 561
I L DS GTTWR A
Sbjct: 472 IELEDSRAGTTWRRA 486
>gi|418481027|ref|ZP_13050077.1| cysteinyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|384571373|gb|EIF01909.1| cysteinyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 460
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/488 (44%), Positives = 302/488 (61%), Gaps = 35/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RANE GE SL+ R E H D L+ P +EPR ++++ I
Sbjct: 62 TFVRNITDIDDKIIKRANENGETCDSLTERLIGEMHADFDALNMKRPDIEPRATEYIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY D GDV F + K+ +YG+LS + LE +AG RV ++S K++ DF
Sbjct: 122 IELVQKLIERGFAYVADNGDVMFEIAKYDDYGKLSRQDLEQLQAGARVEIESAKRSSLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y P +R FL+ HYRS
Sbjct: 242 SCCAHGTDYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDPETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L AA + ++ F +M
Sbjct: 302 LNYSEENLNQARASLERLYTSL----RGLDLSTPAAGGE-----------EYVKRFTEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN + + + + +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREIN--------RVKTEDIATASALGSLMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+L Q E LK ++D+V + I+ R +R K++ +D R L +GI L D
Sbjct: 393 --ILHQDPEAFLKGDSGSDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED 450
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 451 GPEGTTWR 458
>gi|37679546|ref|NP_934155.1| cysteinyl-tRNA synthetase [Vibrio vulnificus YJ016]
gi|37198290|dbj|BAC94126.1| cysteinyl-tRNA synthetase [Vibrio vulnificus YJ016]
Length = 509
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 296/489 (60%), Gaps = 37/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 51 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 110
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R E H D L+ P VEPR + ++ I
Sbjct: 111 TFVRNITDIDDKIIKRAAENGETCDSLTERLIGEMHADFDALNMKRPDVEPRATQYIQEI 170
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY D GDV F V+KF EYG+LS + L+ +AG RV V++ K+ P DF
Sbjct: 171 IELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVETAKRCPLDF 230
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 231 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 290
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 291 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 350
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L L S P ++ + F A+M
Sbjct: 351 LNYSEENLNQARASLERLYTSLR------------GLDFSAAP---AGGEEYVSRFTAAM 395
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L + L + +AL +R + V+G
Sbjct: 396 NDDFNTPEAYSVLFDMAREINRL--------KTEDLANASALGALMRELADVIG------ 441
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L +A + D D + IE R +R K++ +D R L +GI L
Sbjct: 442 ---ILHQDPEAFLKGDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLE 498
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 499 DGPDGTTWR 507
>gi|221134802|ref|ZP_03561105.1| cysteinyl-tRNA synthetase [Glaciecola sp. HTCC2999]
Length = 459
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/489 (44%), Positives = 290/489 (59%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++ P KVGMYVCG+T YDLSH+GHAR Y++FDV+ RYLRH+GYEV
Sbjct: 2 LHIFNTLTREKAPFVPLEPNKVGMYVCGITVYDLSHMGHARTYLSFDVMVRYLRHMGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R H+D L+ LPP +EPRV+ HM I
Sbjct: 62 KYVRNITDVDDKIIQRAIENNETMSQLTERTVAMMHEDFAALNLLPPDIEPRVTTHMAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++I +++ G AY GDV F V F +YG LS + L+ ++G RVAV K +P DF
Sbjct: 122 IEVIEKLVAKGHAYVASSGDVLFDVSTFKDYGALSKQDLDQLQSGARVAVADGKDDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK EP W SPWG GRPGWHIECSAM+ +LG FDIHGGG DL FPHHENE+AQ
Sbjct: 182 VLWKKAKANEPSWSSPWGEGRPGWHIECSAMNHKHLGKHFDIHGGGSDLTFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H G V +D+EKMSKSLGNFFT+R V+E +H LR FL+ HYRS
Sbjct: 242 SCCAFDTPYVNTWVHTGMVQVDNEKMSKSLGNFFTLRSVLEQHHKETLRFFLMSAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSI--NKFHNDFLA 432
++YS LE A + +Y L D + PD+ T + + F A
Sbjct: 302 LSYSQDNLEQAQSGLERLYTALRD----------------VTPDSRTELGYGGYLARFEA 345
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M+DD +T + + L D K +N K ++ + L + + ++ +LG +
Sbjct: 346 AMNDDFNTPIAFSVLFDCAKDLN--------KAKSTDPAEASRLAQVLISLGAILGCLQD 397
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
L AD+ + V I R AR +K++ +DA R L A+G+ + DS
Sbjct: 398 DPVNFL-------QSDADIDGEAVAALIAQRNQARADKDWGAADAARDALTAMGVVIEDS 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 ATGTTWRKA 459
>gi|258621406|ref|ZP_05716440.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM573]
gi|262171188|ref|ZP_06038866.1| cysteinyl-tRNA synthetase [Vibrio mimicus MB-451]
gi|258586794|gb|EEW11509.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM573]
gi|261892264|gb|EEY38250.1| cysteinyl-tRNA synthetase [Vibrio mimicus MB-451]
Length = 459
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/485 (45%), Positives = 299/485 (61%), Gaps = 30/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP V GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E E SL+ R +E + D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY D GDV F V K+ EYG+LS + LE +AG RV V++ K++P DF
Sbjct: 122 IALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEAAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L L S+P ++ + F A+M
Sbjct: 302 LNYSEENLNQARASLERLYNALR------------GLDRSVP---AAGGEEYLSRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L ++ L + +AL +R + V+G++ Y
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KSEDLTNASALGSLMRELADVIGIL---Y 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E + A D +Q+ I+ R +R K++ +D R L +GI L D P
Sbjct: 396 QEPETFFQGSA---EDEEAEQIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLEDGPN 452
Query: 555 GTTWR 559
GTTWR
Sbjct: 453 GTTWR 457
>gi|359298707|ref|ZP_09184546.1| cysteinyl-tRNA synthetase [Haemophilus [parainfluenzae] CCUG 13788]
gi|402304648|ref|ZP_10823714.1| cysteine--tRNA ligase [Haemophilus sputorum HK 2154]
gi|400377443|gb|EJP30320.1| cysteine--tRNA ligase [Haemophilus sputorum HK 2154]
Length = 459
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/489 (45%), Positives = 292/489 (59%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR+LGY +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRYLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E +L R E H+D DL+ L P VEPR + H+P I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDALVERMIAEMHKDFDDLNILRPDVEPRATQHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ +++ G AY DGDV F V+ F +YG LS + L +AG RV + S KKNP DF
Sbjct: 122 IAMVEKLIAKGHAYVAADGDVMFDVESFSQYGALSRQNLAQLQAGARVEIKSVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP WESPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWESPWGNGRPGWHIECSAMNSQELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YW+H G +TID EKMSKSLGNFF+IR ++ LY +LR F + HYRS
Sbjct: 242 SCCAHGGEYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YSV L+ A + +Y L C+ ++ P I+ F +M
Sbjct: 302 LDYSVDNLDLARSALERLYTALRGCDLTVA-----------PAGGEQYISAFE----TAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
+DD +T LA L + + +N L + A+RL++LA VLGL+
Sbjct: 347 NDDFNTPGALAVLFEIAREVNKLKAEDPAQANGLAVRLKALAG----------VLGLLEQ 396
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
E L+ A + A++ I R A+ K + +D +R L A+ I L D+
Sbjct: 397 D-PESFLKGESNADEAAEIE-----ALIAKRNEAKAAKNWAVADEVRDKLKAMNIVLEDT 450
Query: 553 PVGTTWRPA 561
P GTTWR A
Sbjct: 451 PNGTTWRKA 459
>gi|332532274|ref|ZP_08408155.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
gi|332038372|gb|EGI74817.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
Length = 459
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/485 (45%), Positives = 295/485 (60%), Gaps = 30/485 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E KP VEGK+ MYVCG+T YD HIGHAR +V FDV+ RYLRH+GY++ Y
Sbjct: 4 IYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDLKY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L+ R + H+D L+ L P +EP V+ HM II
Sbjct: 64 VRNITDIDDKIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEIIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
M+ ++++ G AY DGDV F V F +YG LS + L ++G RV V K +P DF L
Sbjct: 124 MVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK GEP W SPWG GRPGWHIECS MS+ +LG FDIHGGG DL FPHHENEIAQSC
Sbjct: 184 WKKAKAGEPSWSSPWGEGRPGWHIECSVMSSKHLGEHFDIHGGGSDLQFPHHENEIAQSC 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A N +++ WIH G V ++ EKMSKSL NFFT+R+V++ Y ++R FLI HYRS +N
Sbjct: 244 CANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDAESVRYFLISGHYRSQLN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L+ A + IY AL+D +P + N+F F +M+D
Sbjct: 304 YSQENLDQARSSLERIY---------------TALRDVVPVECDLEGNEFVAKFRKAMND 348
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T L L + K +N + + G QA +L + +R++ VLG+ E
Sbjct: 349 DFNTPEALPVLFELAKELNRVKESDAG--QAGKLAFI------LRSLGEVLGVAQQA-PE 399
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
LQ + + A + E +++R E AR +K++ +D R L A+G+ L DS T
Sbjct: 400 AFLQGGQDDDEVATI-EALIVKRNE----ARASKDWAAADEARDALNALGVILEDSAGKT 454
Query: 557 TWRPA 561
TWR A
Sbjct: 455 TWRKA 459
>gi|417842975|ref|ZP_12489052.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21127]
gi|341950209|gb|EGT76798.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21127]
Length = 459
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/488 (44%), Positives = 289/488 (59%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +++ F F +M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAFGG---------------ENFVATFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + IN L + +E L +R + +LG
Sbjct: 347 DDDFNTPNALSVLFEMAREINKL--------KTEDVEKANGLAARLRELGAILG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LLQ + +A +D+V + I+ R AR K++ +DA R +L A+GI L D
Sbjct: 393 ---LLQQEPEKFLQAGSDDDEVAKIETLIKQRNEARAAKDWSAADAARNELTAMGIVLED 449
Query: 552 SPVGTTWR 559
GTTWR
Sbjct: 450 GANGTTWR 457
>gi|320156698|ref|YP_004189077.1| cysteinyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
gi|56749448|sp|Q7MLR5.2|SYC_VIBVY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|319932010|gb|ADV86874.1| cysteinyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
Length = 460
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 296/489 (60%), Gaps = 37/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R E H D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGETCDSLTERLIGEMHADFDALNMKRPDVEPRATQYIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY D GDV F V+KF EYG+LS + L+ +AG RV V++ K+ P DF
Sbjct: 122 IELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVETAKRCPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L L S P ++ + F A+M
Sbjct: 302 LNYSEENLNQARASLERLYTSLR------------GLDFSAAP---AGGEEYVSRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L + L + +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KTEDLANASALGALMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L +A + D D + IE R +R K++ +D R L +GI L
Sbjct: 393 ---ILHQDPEAFLKGDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLE 449
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 450 DGPDGTTWR 458
>gi|344995511|ref|YP_004797854.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|343963730|gb|AEM72877.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 465
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/480 (43%), Positives = 297/480 (61%), Gaps = 24/480 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT+S+ +E +P + KV MYVCG T YD HIG+AR + FD L RY + GYEV Y
Sbjct: 3 LYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEVIY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTDV+DK+I RAN+ G L+RR+ EE+++D L+ + PR ++ + +I
Sbjct: 63 IQNFTDVEDKMINRANKEGITVFELARRFIEEYYKDADRLNVKRATKNPRATEEIEDMIA 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++D G+AY VDGDVYF KF EYG+LS + +E+ AG RV + +K++P DF LW
Sbjct: 123 LIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFVLW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W SPWG GRPGWHIECS M+ YLG + DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A +W+HNG+V I++EKMSKSLGNFFT+R+++E YHP ALRLF++ HYR P+N+
Sbjct: 243 ATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPLNF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV-TSINKFHNDFLASMSD 436
S+ +E A + IY C + L L A S D + +I F+ +M D
Sbjct: 303 SIDLIEQAEVALKRIYT----CYENLEFLIQNAASSSESDDKLKAAIEDLKAKFIEAMED 358
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
DL+T L + ++ IN H K+A L + T++ + +LG++
Sbjct: 359 DLNTAEATGYLFEMVREIN--THANSCSKEA-----LTFAKDTLKELCGILGIL------ 405
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
E+ + + ++L+ +E R ARK K + ++D IR +L ++G ++D+P GT
Sbjct: 406 ------EQYGAKEEAIPQEILELVEKRNQARKVKNFAEADRIRDELKSLGYIVLDTPQGT 459
>gi|188026279|ref|ZP_02961521.2| hypothetical protein PROSTU_03559 [Providencia stuartii ATCC 25827]
gi|188022312|gb|EDU60352.1| cysteine--tRNA ligase [Providencia stuartii ATCC 25827]
Length = 494
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/485 (46%), Positives = 291/485 (60%), Gaps = 27/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FD + RYLR+LGY++
Sbjct: 34 LQIFNTLSRQKEEFKPIHPGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 93
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E SL+ R E H+D L+ L P EPR + H+ I
Sbjct: 94 NYVRNVTDIDDKIIKRAAENNETVDSLTTRMLAEMHKDFDALNILRPDSEPRATQHIDEI 153
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ ++ G AY D GDV F V YGQLS + LE +AG RV V K+NP DF
Sbjct: 154 IEITDLLIKRGHAYVADNGDVMFEVKTDKNYGQLSRQDLEQLQAGARVEVADSKRNPMDF 213
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP WESPWG GRPGWHIECSAM++ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 214 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKALGNHFDIHGGGSDLMFPHHENEIAQ 273
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSL NFFTIR V+E Y P +R FL+ HYRS
Sbjct: 274 SSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDPETVRYFLLSGHYRSQ 333
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + +Y L +K S+ P F F +M
Sbjct: 334 LNYTEENLKQARTALERLYTALRGTDK------------SVAP---AGGEIFKKRFEDAM 378
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L + K A L S +R + VLGL+
Sbjct: 379 NDDFNTPEAYSVLFDMAREINRL--KSENKVAANELAS------ELRKLAGVLGLLEQD- 429
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ + ++ + + L I+ R ARKNKE+ +DA R +L A+GI L D
Sbjct: 430 PEAFLQGNAQGEGDEEVAKIEAL--IKQRNNARKNKEWALADAARDELTAMGIVLEDGAQ 487
Query: 555 GTTWR 559
GTTWR
Sbjct: 488 GTTWR 492
>gi|416231107|ref|ZP_11628689.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
gi|326560050|gb|EGE10445.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
Length = 480
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/489 (43%), Positives = 303/489 (61%), Gaps = 22/489 (4%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
+QL LY+T+S + KP G++G+YVCG+T YD H+GHARV V FDV+ R+LR +GY
Sbjct: 9 SQLQLYDTLSASKRPFKPIHAGQIGIYVCGMTVYDYCHMGHARVMVGFDVIVRWLRAIGY 68
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
+V YVRN TD+DDKII RA + GE L+ R+ HQD L C P++EPR ++H+
Sbjct: 69 QVNYVRNITDIDDKIIQRAYDNGETITELTDRFITAMHQDEQFLGCQSPNIEPRATEHIE 128
Query: 194 HIIDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKN 250
++ +I +L AY+ GDVY++++KFP YG+LS R ++D +AG ERV+ K++
Sbjct: 129 NMQHLIDVLLTKNLAYQGSGGDVYYAIEKFPNYGKLSKRHVDDMQAGASERVSTAEDKRH 188
Query: 251 PADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHEN 310
P DF LWK+AK EP W+SPWG GRPGWHIECSAMS LG +FDIHGGG DL FPHHEN
Sbjct: 189 PFDFVLWKTAKPSEPHWQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGHDLQFPHHEN 248
Query: 311 EIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTH 370
EIAQS A ++ ++W+H GF+ ID EKMSKSLGNFFTIR+VM+ +HP +R FL+ +H
Sbjct: 249 EIAQSEGATGKTYANHWMHMGFINIDGEKMSKSLGNFFTIREVMDKFHPETIRFFLLSSH 308
Query: 371 YRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDF 430
YRSP+N+S L+ + + IYQ+L E + SI P+ S + F
Sbjct: 309 YRSPVNFSDTALKESHTALSRIYQSLKSAENFGVI--------SIMPNAWES--EAGQAF 358
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
+M+DD +T ++ L + IN + + G+ Q E+ T++ + +VL +
Sbjct: 359 AKAMNDDFNTPKAVSVLFSVVTEINRAM--KAGEYQKATQEA-----STLKTLASVLNIA 411
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
+ E L K L++ ++ +I R A+ K + K+DAIR +L GI L
Sbjct: 412 QSSPHEFLQA--NIGNKPDGLSDAEIANKIAQRQQAKAQKNFAKADAIRDELNRQGIELE 469
Query: 551 DSPVGTTWR 559
D +GTTWR
Sbjct: 470 DGRMGTTWR 478
>gi|386742349|ref|YP_006215528.1| cysteinyl-tRNA synthetase [Providencia stuartii MRSN 2154]
gi|384479042|gb|AFH92837.1| cysteinyl-tRNA synthetase [Providencia stuartii MRSN 2154]
Length = 462
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/485 (46%), Positives = 291/485 (60%), Gaps = 27/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FD + RYLR+LGY++
Sbjct: 2 LQIFNTLSRQKEEFKPIHPGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E SL+ R E H+D L+ L P EPR + H+ I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNETVDSLTTRMLAEMHKDFDALNILRPDSEPRATQHIDEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ ++ G AY D GDV F V YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IEITDLLIKRGHAYVADNGDVMFEVKTDKNYGQLSRQDLEQLQAGARVEVADSKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP WESPWG GRPGWHIECSAM++ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKALGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSL NFFTIR V+E Y P +R FL+ HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDPETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + +Y L +K S+ P F F +M
Sbjct: 302 LNYTEENLKQARTALERLYTALRGTDK------------SVAP---AGGEIFKKRFEDAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L + K A L S +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--KSENKVAANELAS------ELRKLAGVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ + ++ + + L I+ R ARKNKE+ +DA R +L A+GI L D
Sbjct: 398 PEAFLQGNAQGEGDEEVAKIEAL--IKQRNDARKNKEWALADAARDELTAMGIVLEDGAQ 455
Query: 555 GTTWR 559
GTTWR
Sbjct: 456 GTTWR 460
>gi|404379151|ref|ZP_10984218.1| cysteinyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
gi|294483496|gb|EFG31181.1| cysteinyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
Length = 475
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/500 (43%), Positives = 297/500 (59%), Gaps = 46/500 (9%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L+LYNT++R++E +P V MYVCG+T YD H+GHARV V FD++ R+LR GY +
Sbjct: 2 LYLYNTLTRQKERFEPIDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARAN+ GE L+ R+ + ++D L L P +EP+ ++H+ +
Sbjct: 62 TYVRNITDIDDKIIARANQNGETIQQLTERFIQAMNEDSQALGVLRPDIEPKATEHIAQM 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI ++++NG AY + GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF
Sbjct: 122 IQMIEKLIENGKAYPAENGDVYYAVREFDAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK EP W SPWG GRPGWHIECSAM G +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPEEPSWASPWGNGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAA----CN------------NSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYH 358
SC A C +SH+ YW+HNGF+ +D+EKMSKSLGNFFTIR V++ Y
Sbjct: 242 SCGANGGLCGHNKPVSGSLKKIDSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYQ 301
Query: 359 PLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPD 418
P +R F++ HYRSP+NYS L+ A + +Y TL++ + LD+
Sbjct: 302 PEVVRFFILRAHYRSPLNYSDAHLDDAKNSLTRLYNTLNNVKPIEFKLDSNG-------- 353
Query: 419 TVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEK 478
+ N + + F +M+DD T ++ L + N A L
Sbjct: 354 ---NNNDYTHKFFNAMNDDFGTAEAVSVLFEIANEANK--------------NDSAELSG 396
Query: 479 TIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAI 538
++ + VLGL+ + L + L+ D++ + I R +AR+ K + +SD I
Sbjct: 397 CLKTLGGVLGLLQDNPEQFL----QGGNNVDGLSADEINKLISQRKIARETKNWAESDRI 452
Query: 539 RKDLAAVGIALMDSPVGTTW 558
R LA I + DS GTTW
Sbjct: 453 RDILAEHKIQVKDSADGTTW 472
>gi|161501802|ref|NP_761714.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
gi|30316151|sp|Q8D8R1.2|SYC_VIBVU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|319999475|gb|AAO11241.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
Length = 460
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 295/489 (60%), Gaps = 37/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R E H D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGETCDSLTERLIGEMHADFDALNMKRPDVEPRATQYIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY D GDV F V+KF EYG+LS + L+ +AG RV V++ K+ P DF
Sbjct: 122 IELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVETAKRCPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L L S P ++ + F A+M
Sbjct: 302 LNYSEENLNQARASLERLYTSLR------------GLDFSAAP---AGGEEYVSRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L + L + +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KTEDLANASALGALMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L A + D D + IE R +R K++ +D R L +GI L
Sbjct: 393 ---ILHQDPDAFLKGDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLE 449
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 450 DGPEGTTWR 458
>gi|220904715|ref|YP_002480027.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254781675|sp|B8J0S2.1|SYC_DESDA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219869014|gb|ACL49349.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 483
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/483 (45%), Positives = 297/483 (61%), Gaps = 7/483 (1%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT+ R++E P GKV MYVCG+T YD HIGHAR + FDVL R LRH+G +V +
Sbjct: 3 LYNTLGRQKEEFTPLRPGKVHMYVCGITAYDYCHIGHARSALVFDVLVRQLRHMGLDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTDVDDKII RAN+ G D +++ Y F++DM L VEPR +DH+ I D
Sbjct: 63 VRNFTDVDDKIINRANKEGLDWREVAQTYINAFYEDMDRLGVQRADVEPRATDHIQEIQD 122
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ +++ G AY GDVYF V +P YG+LSGR L++ +G RVA K++P DFAL
Sbjct: 123 LCAKLVAEGKAYATTSGDVYFRVRSYPPYGKLSGRSLDELLSGARVAPGEEKEDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWGPGRPGWHIECSAMS +YL DIHGGG DLVFPHHENEIAQ+
Sbjct: 183 WKAAKPGEPSWESPWGPGRPGWHIECSAMSESYL--PLDIHGGGQDLVFPHHENEIAQTE 240
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A C+ YW+HNGFV +++EKMSKSLGNF TIR ++E Y P LR FL+G HYRSPI+
Sbjct: 241 AVCHCHLARYWVHNGFVQVNAEKMSKSLGNFKTIRDILESYLPETLRFFLLGKHYRSPID 300
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL-ASMS 435
++ ++ A + + +Y L + +KAL+ K S P +T + L +M+
Sbjct: 301 FTAEGMDEAEKALHRVYTALLETQKALT---REKWKKSPLPAQLTEDWAAQAEALDEAMN 357
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DDL+T L + ++ +N LL + + + L T LGL
Sbjct: 358 DDLNTAQALGHIFTQVRLVNRLLEDKTLRAAEAGRDLLQDFLARAEQWNTRLGLFGQQPE 417
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
L LR R ++ +V +++R AR NK++ +SDA+R+ L +G+++ D+P G
Sbjct: 418 AFLADLRRIRAARRNIDIPRVEALLQERQEARANKDFARSDALRQALLDLGVSVQDTPEG 477
Query: 556 TTW 558
W
Sbjct: 478 QNW 480
>gi|409397649|ref|ZP_11248512.1| cysteinyl-tRNA ligase [Pseudomonas sp. Chol1]
gi|409117783|gb|EKM94209.1| cysteinyl-tRNA ligase [Pseudomonas sp. Chol1]
Length = 461
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/487 (47%), Positives = 289/487 (59%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +Y+T+S+ ++ KP KV MYVCG+T YD HIGHARV V FDV+ R+LRH GYE+
Sbjct: 3 LSIYSTLSKSKDAFKPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVARWLRHRGYEL 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE L R H+D L+ L P +EPR +DH+ +
Sbjct: 63 TYVRNITDIDDKIIKRANENGESFQDLVARMIAAMHEDEARLNVLRPDIEPRATDHIAGM 122
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D GFAY +GDVY+ V KF YG+LS RK+ED + G R+ VD K++P DF
Sbjct: 123 HAMIQTLIDKGFAYAPGNGDVYYRVGKFAGYGKLSRRKIEDLKIGARIEVDEAKEDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP WESPWGPGRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 183 VLWKGAKPGEPSWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 243 SEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L L ++ P + +F A+M
Sbjct: 303 INYSEDSLREAKGALERFYNGLK------------GLPEAAPAGGEALVERFG----AAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L + ++ +N L + +LAA K + VL VL L +
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLRDS-----DLNAAAALAARLKELAGVLGVLQLDPEAF 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D E + L I R AR K + +SD IR L A+G+ L D
Sbjct: 402 ------LQAGAAGKVDAAEVEAL--IGARLAARAEKNWAESDRIRDQLTAMGVVLEDGKG 453
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 454 GTTWRLA 460
>gi|312621501|ref|YP_004023114.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
2002]
gi|312201968|gb|ADQ45295.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
2002]
Length = 465
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/482 (42%), Positives = 298/482 (61%), Gaps = 28/482 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++ +E +P EGKV MYVCG T YD HIG+AR + FD L RY + GYEV Y
Sbjct: 3 LYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEVIY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTDV+DK+I RAN+ G L+ R+ +E+++D L+ + PR ++ + +I
Sbjct: 63 IQNFTDVEDKMINRANKEGVTVFELAERFIQEYYKDADRLNVKRATKNPRATEEIEDMIA 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I ++D G+AY VDGDVYF KF EYG+LS + +E+ AG RV + +K++P DFALW
Sbjct: 123 LIQTLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W SPWG GRPGWHIECS M+ YLG + DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ +W+HNG+V I++EKMSKSLGNFFT+R+++E YHP ALRLF++ HYR P+N+
Sbjct: 243 STGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPLNF 302
Query: 378 S---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
S + Q ESA +RI+ Y+ L L+ +S + + F+ +M
Sbjct: 303 SIDLIEQAESALKRIYTCYENLE------YLIKNGTTSNSSDSTLKAVLKELKAKFIDAM 356
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DDL+T L + ++ IN H+ K + L T++ + ++LG++
Sbjct: 357 EDDLNTAEATGYLFEMVREIN--THSNTCSKDVLIL-----ARDTLKELCSILGIL---- 405
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E+ ++ D ++L+ +E R ARK K + ++D IR DL ++G ++D+P
Sbjct: 406 --------EQYEEKKDEIPPEILELVEKRNEARKAKNFLEADRIRDDLRSLGYIVLDTPQ 457
Query: 555 GT 556
GT
Sbjct: 458 GT 459
>gi|238022971|ref|ZP_04603397.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
gi|237865779|gb|EEP66917.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
Length = 474
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/499 (44%), Positives = 293/499 (58%), Gaps = 47/499 (9%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY +
Sbjct: 4 LTVYNTLTRQKEPFIPLNPQNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARANE GE L+ R+ ++D L P VEP+ ++H+ +
Sbjct: 64 TYVRNITDIDDKIIARANENGETIQQLTARFIAAMNEDSDALGVQRPDVEPKATEHIAQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI Q++ NG AY +GDVY++V +FP YGQLSG+ L+D RAGERV VD K++P DF
Sbjct: 124 IAMIEQLIANGKAYSAANGDVYYAVREFPAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 183
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK EP W+SPWG GRPGWHIECSAM G +FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKAAKPEEPHWQSPWGNGRPGWHIECSAMGGELFGDTFDIHGGGADLQFPHHENEIAQ 243
Query: 315 SCAACN---------------NSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHP 359
SC A + +SH+ YW+HNGF+ +D+EKMSKSLGNFFTIR V++ Y
Sbjct: 244 SCGAHHGISGEHAPRAAHKTIDSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYDA 303
Query: 360 LALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDT 419
+R F++ HYRSP+NYS L+ A + +Y L + A L A
Sbjct: 304 EVVRFFILRAHYRSPLNYSDAHLDDAKHSLTSLYNALGNVAPAPFTLSEHA--------- 354
Query: 420 VTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKT 479
N + F A+M DD T +A L + K +N K Q+ A L
Sbjct: 355 ----NDYTRRFYAAMDDDFDTVKAVAVLFELAKEVN--------KTQS------AELSGC 396
Query: 480 IRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIR 539
++ + VLGL+ E L + L+ D + I R +AR NK + +SD IR
Sbjct: 397 LKALAGVLGLLQREPHEFL----QSGAPDNGLSADAIEALIAQRNLARANKNWAESDRIR 452
Query: 540 KDLAAVGIALMDSPVGTTW 558
+LAA G+ L D+ TTW
Sbjct: 453 DELAAQGVVLRDAGGETTW 471
>gi|379012779|ref|YP_005270591.1| cysteinyl-tRNA synthetase [Acetobacterium woodii DSM 1030]
gi|375303568|gb|AFA49702.1| cysteinyl-tRNA synthetase CysS [Acetobacterium woodii DSM 1030]
Length = 465
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/486 (42%), Positives = 305/486 (62%), Gaps = 25/486 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT+++K+E P EGKV MY CG T Y+ HIG+AR ++ FDVL R+L + GYEV +
Sbjct: 3 LYNTLTQKKETFVPIEEGKVRMYSCGPTVYNYFHIGNARPFIVFDVLRRFLEYTGYEVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTDVDDKII R++E P +++ +Y +E+ D L SV P+VS+++ II+
Sbjct: 63 IQNFTDVDDKIINRSHEENISPEAVAEKYIQEYFADADALGIKRASVHPKVSENITEIIE 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
MI + G AY V G+VY+ V+ F +YG+LS + ++D R+G R+ V+ K +P DFALW
Sbjct: 123 MIKTLEAKGLAYNVSGNVYYRVEAFKDYGKLSKQSIDDLRSGARIEVNDEKHSPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K K+GEP+W SPWG GRPGWHIECSAMS +LG + DIHGGG DL+FPHHENEIAQS
Sbjct: 183 KKKKDGEPYWPSPWGDGRPGWHIECSAMSKKHLGATIDIHGGGQDLIFPHHENEIAQSEG 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+C + +YW+HNG++ ID++KMSKS GNFFT+R + + + +R+FL+ HYRSP+N+
Sbjct: 243 SCGKTFANYWVHNGYINIDNQKMSKSKGNFFTVRDIAKKFDLEVVRMFLLMAHYRSPVNF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDT--VTSINKFHNDFLASMS 435
S V L+ A+ + +Y E LL+ A L+ + + + +++++ +DF+A+M
Sbjct: 303 SEVLLQQAATALERLYTAKFQME---FLLEKAPLEAATETEMTWMNTLDQYKHDFIAAMD 359
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD++T +A + + ++ +N L K M A + + TVLGL
Sbjct: 360 DDINTADAIAVIFELVRDLNSNLDANSTKAAIM------AGQNIFSELTTVLGLA----- 408
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
++ K D ED + Q R ARK K+++++DAIR +L A GI L D+ G
Sbjct: 409 -----VKAKETNLDDAVEDLIAQ----RQAARKAKDFKRADAIRDELLAKGIVLEDTREG 459
Query: 556 TTWRPA 561
W+ A
Sbjct: 460 VKWKKA 465
>gi|419801786|ref|ZP_14327000.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK262]
gi|385193165|gb|EIF40546.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK262]
Length = 459
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/488 (45%), Positives = 294/488 (60%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP EGKVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + L +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLNQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +++ F F +M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAFGG---------------ENFVEAFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + IN L ++A + LAA +R + +LGL
Sbjct: 347 DDDFNTPNALSVLFEMAREINKL-----KTEEAEKANGLAA---RLRELAGILGL----- 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
L Q EK L+ A +D+V + I+ R AR K++ +DA R +L A+GI L D
Sbjct: 394 ---LQQDPEKFLQ-AGSDDDEVAKIEALIKQRNEARAAKDWTAADAARNELTAMGIVLED 449
Query: 552 SPVGTTWR 559
GTTWR
Sbjct: 450 GANGTTWR 457
>gi|325267558|ref|ZP_08134210.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
gi|324980908|gb|EGC16568.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
Length = 487
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/497 (44%), Positives = 294/497 (59%), Gaps = 47/497 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 19 LYNTLTRQKEEFVPLNPENVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPLTY 78
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARANE GE L+ R+ ++D L L P +EP+ ++H+ +I
Sbjct: 79 VRNITDIDDKIIARANENGETIGELTARFIAAMNEDSDALGVLRPDIEPKATEHIGQMIA 138
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F EYGQLSG+ L+D RAGERV VD+ K++P DF L
Sbjct: 139 MIEDLVANGKAYPAPNGDVYYAVREFAEYGQLSGKSLDDLRAGERVDVDANKRDPLDFVL 198
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAM G +FDIHGGG DL FPHHENEIAQSC
Sbjct: 199 WKAAKPGEPSWESPWGNGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENEIAQSC 258
Query: 317 AA----CN-----------NSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLA 361
A C NSH+ YW+HNGF+ +D+EKMSKSLGNFFTIR V++ Y P
Sbjct: 259 GAHGGLCGHDAPHAAGKRINSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYAPEV 318
Query: 362 LRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVT 421
+R F++ HYRSP+NYS L+ A + +Y TL + + A + A +D+
Sbjct: 319 VRFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLGNVQAA----EFAVREDA------- 367
Query: 422 SINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIR 481
N + F A+M DD +T ++ L + N + G A L ++
Sbjct: 368 --NDYTRRFFAAMDDDFNTAEAMSVLFELANEAN-----KTGS---------AELAGCLK 411
Query: 482 NVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKD 541
+ LGL+ L + + L+ D++ I R AR+ K + +SD IR
Sbjct: 412 ALGGTLGLLQDDPQHFL----QSGGEEGGLSADEIEALITQRKTARETKNWAESDRIRDL 467
Query: 542 LAAVGIALMDSPVGTTW 558
LA I L D GTTW
Sbjct: 468 LAEHKILLKDGADGTTW 484
>gi|332289654|ref|YP_004420506.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
gi|330432550|gb|AEC17609.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
Length = 459
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/489 (46%), Positives = 298/489 (60%), Gaps = 38/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+ R++E+ P +VGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLKREKEIFTPIHPNQVGMYVCGVTVYDLCHIGHGRTFVSFDVIARYLRYLGYHL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E ++D L+ P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENHETCEHLVDRMVAEMYKDFDALNIQRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ +++DNG AY +GDV F VD FPEYG+LS + L +AG RV ++ KKNP DF
Sbjct: 122 IALVQRLIDNGHAYVAQNGDVMFDVDSFPEYGKLSRQDLSQLQAGARVEINDIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W+SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWQSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A ++++YW+H+G + +D EKMSKSLGNFFTIR V++ Y ++R FL+ HYRS
Sbjct: 242 SCCAHGGAYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLQHYDAESVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLE---SASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
+NYS L+ SA ER++ AL DA A T +F F
Sbjct: 302 LNYSEENLKLAHSALERLY----------TALRGTDANA--------TAAGGEQFIEAFK 343
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A+M DD +T L+ L D + +N L +Q + ++ AA +R + VLGL+
Sbjct: 344 AAMDDDFNTPGALSVLFDMARELNKL-----KAEQNPQTDAFAA---RLRELAGVLGLLY 395
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
E LQ D E ++++ I R AR NK++ +DA R LAA+G+ +
Sbjct: 396 QD-PETFLQ------AGMDDDETKIIETLIAQRNQARANKDWATADAARDKLAAMGVVIE 448
Query: 551 DSPVGTTWR 559
D GTTWR
Sbjct: 449 DGANGTTWR 457
>gi|344344279|ref|ZP_08775143.1| cysteinyl-tRNA synthetase [Marichromatium purpuratum 984]
gi|343804236|gb|EGV22138.1| cysteinyl-tRNA synthetase [Marichromatium purpuratum 984]
Length = 462
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/485 (45%), Positives = 288/485 (59%), Gaps = 27/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++N+++R++ +P GKV MYVCG+T YD H+GHARV V FDV+YRYLR LGYEV
Sbjct: 2 LQIHNSLTRQKTPFQPLEPGKVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRALGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R+ H+D L L P+ EPR + H+ I
Sbjct: 62 TYVRNITDIDDKIIRRAAENGESCAALTERFIAAMHEDAAALGVLAPTSEPRATAHIDEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
M+ ++D G AY D GDVY++V +FP YG+LSG+ +D RAG RV VD K++P DF
Sbjct: 122 QTMVATLIDKGLAYAADNGDVYYAVSRFPGYGKLSGKDPQDLRAGARVEVDEAKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK AK GEP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKGAKPGEPSWSSPWGEGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A W+HNGFV I+ EKMSKSLGNFFT+R+V+E + +R F++ +HYRSP
Sbjct: 242 SEGATGEPFAEVWMHNGFVRINEEKMSKSLGNFFTVREVLERFRAEEIRYFILTSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ QL+SA + +Y L +P + + F F A+M
Sbjct: 302 LNYADEQLQSARGALTRLYTALR----------------GLPEAEAPAESAFATRFTAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA L + + +N + A E AAL +R + V+G++
Sbjct: 346 DDDFNTPEALAVLFELAREVNR-------ARDAGEPEQAAALGAELRRLGGVIGILQ--- 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LR L + + I R AR +++ ++D +R L GI L D
Sbjct: 396 DDPERYLRGGDGGTDGLDDAAIESMIAQRQAARAARDWAEADRLRDALTEAGIVLEDGAQ 455
Query: 555 GTTWR 559
GTTWR
Sbjct: 456 GTTWR 460
>gi|226951456|ref|ZP_03821920.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
gi|226837804|gb|EEH70187.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
Length = 473
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/488 (45%), Positives = 308/488 (63%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG++ +YVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRNEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKIIARANE GE L+ R+ + ++D DL C+ P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIARANENGESIQQLTARFIDAMNEDAADLGCVAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI+ +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MISTLVNKGAAYPASNGDVYFEVSKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEATTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ AL+ S + +F+N +M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFKAYQQVYGQKTVDALEQSF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + +QAM L S T+R + +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQA-EQAMVLYS------TLRQLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L + + AL +D + ++Q+ R A+K K++ K+D IR+ L G+ L D+
Sbjct: 408 DEFLKSDIGQDALALSDTDIEDLIQQ---RVDAKKAKDFAKADGIRQSLLDQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTIWRRA 472
>gi|345874764|ref|ZP_08826564.1| cysteine--tRNA ligase [Neisseria weaveri LMG 5135]
gi|343970123|gb|EGV38321.1| cysteine--tRNA ligase [Neisseria weaveri LMG 5135]
Length = 470
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/500 (44%), Positives = 296/500 (59%), Gaps = 49/500 (9%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY +
Sbjct: 2 LNIYNTLTRQKEEFIPIDSKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRAQGYPL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARA E GE L+ R+ ++D L + P VEP+ ++H+ +
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTERFIRAMNEDAAALGVIRPDVEPKATEHVQQM 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI +++DNG AY D GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF
Sbjct: 122 LGMIQRLIDNGKAYAADNGDVYYAVREFATYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGQGRPGWHIECSAMSEELFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAA----CNN---------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLA 361
SC A C + SH+ YW+HNGF+ +D+EKMSKSLGNFFTIR+V+E Y
Sbjct: 242 SCGAHGGSCGHNRSGGKAIESHVKYWLHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEV 301
Query: 362 LRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVT 421
+R F++ HYRSP+NYS L A + +Y ALK++ P +
Sbjct: 302 VRFFILRAHYRSPLNYSDAHLNDAKGALTRLY---------------TALKNTPPAEFAV 346
Query: 422 --SINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKT 479
+ N + F A+M+DD T +A L + N++ T + L
Sbjct: 347 NENANDYTRRFFAAMNDDFGTVEAIAVL---FELANEVNKTNSNE-----------LAGC 392
Query: 480 IRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIR 539
++ + +++GL+ E L + L+ +++ IE R AR K + +SD IR
Sbjct: 393 LKALGSIIGLLQRDPQEFL----QGGSVSDGLSNEEIESLIEQRKQARAEKNWAESDRIR 448
Query: 540 KDLAAVGIALMDSPVGTTWR 559
L A I L D GTTWR
Sbjct: 449 DLLNAENIILEDGAGGTTWR 468
>gi|402758353|ref|ZP_10860609.1| cysteinyl-tRNA ligase [Acinetobacter sp. NCTC 7422]
Length = 473
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/488 (44%), Positives = 305/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG++ MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKIIARANE GE L+ R+ + ++D +L C P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIARANENGESIQQLTARFIQAMNEDAANLGCAEPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI ++D G AY +GDVYF V KF YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGTLVDKGAAYPAANGDVYFEVSKFNNYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L+ + +F+N +M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFKAYQQVYGQKTVETLEQGF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + ++ M L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQAEQATM-------LYSTLRHLTNILGLVQHDV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L + ++ALK L++ ++ I+ R A+K K++ K+D IR+ L G+ L D+
Sbjct: 408 DEFLKSDIGQEALK---LSDTEIENFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTIWRRA 472
>gi|392421163|ref|YP_006457767.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri CCUG 29243]
gi|390983351|gb|AFM33344.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri CCUG 29243]
Length = 461
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/487 (46%), Positives = 290/487 (59%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E +P KV MYVCG+T YD HIGHARV V FDV+ R+LRH GY+V
Sbjct: 3 LSIYNTLTKTKEAFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA+E GE +L R + H+D L+ L P +EPR +DH+ +
Sbjct: 63 TYVRNITDIDDKIIRRASENGEPFQALVERMIDAMHEDETRLNVLRPDIEPRATDHIAGM 122
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D GFAY +GDVY+ V KF YG+LS RK+ED + G R+ VD K++P DF
Sbjct: 123 HTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKEDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W+SPWG GRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 183 VLWKGAKPGEPSWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 243 SEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P T ++F F +M
Sbjct: 303 INYSEDSLREAKGALERFYNGLK----------------GLPEATPGGGDEFVARFGVAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L + ++ +N L + +LAA K + VL VL L +
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLRES-----DLAAAAALAARLKELAGVLGVLQLEPEAF 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D TE + L I R AR K + +SD IR L A+G+ L D
Sbjct: 402 ------LQAGAAGKVDATEVEAL--IAARLTARAEKNWAESDRIRDQLTALGVVLEDGKG 453
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 454 GTTWRLA 460
>gi|83719803|ref|YP_442471.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
gi|167581386|ref|ZP_02374260.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
gi|167621097|ref|ZP_02389728.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis Bt4]
gi|257138679|ref|ZP_05586941.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
gi|109894888|sp|Q2SX78.1|SYC_BURTA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|83653628|gb|ABC37691.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
Length = 465
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 297/490 (60%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R ++ P+ G+V MYVCG+T YD HIGHAR+ V FD++ R+LR GY V
Sbjct: 4 LRIYNTLARDKQDFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDIVQRWLRAAGYRV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+RR+ + + D L P +EPR +D +P +
Sbjct: 64 TYVRNITDIDDKIIRRALENGETIQSLTRRFIDAMNADFDALGVERPDIEPRATDFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++ NG+AY+ DGDV +SV KF YG+LSG+ LED RAGERVA K +P DF
Sbjct: 124 LGMIEKLEANGYAYQAKDGDVNYSVRKFANYGKLSGKSLEDLRAGERVAAKDAKDDPLDF 183
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AK EP WES +G GRPGWHIECSAM LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKRAKPEEPAGASWESKYGAGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGFV +DSEKMSKSLGNFFTIR+V+E Y +R F++ THY
Sbjct: 244 IAQSEGATGQTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLEKYDAEVVRFFIVRTHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDF 430
RSP+NYS V L+ A + +Y ALKD P ++ H F
Sbjct: 304 RSPLNYSDVHLDDARASLTRLY---------------TALKDVTPDAAPLDWSEAHAQRF 348
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
A+M+DD +T V +A L + +N TR+ AL + ++ + +LGL+
Sbjct: 349 AAAMNDDFNTAVAVAVLFELATEVN---RTRE-----------PALARQLKRLAGLLGLL 394
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
E LQ A + L D++ RI R A++ K Y ++D IR +L GIAL
Sbjct: 395 GREPRE-FLQQAAGAARTGALEPDEIEARIAARVAAKQAKNYAEADRIRAELLEAGIALE 453
Query: 551 DSPVGTT-WR 559
D P G+T WR
Sbjct: 454 DKPGGSTEWR 463
>gi|359428272|ref|ZP_09219308.1| cysteinyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
gi|358236288|dbj|GAB00847.1| cysteinyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
Length = 473
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/488 (44%), Positives = 306/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG++ +YVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKIIARANE GE L+ R+ + ++D +L C+ P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIARANENGETIQQLTARFIDAMNEDAANLGCVAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI+ ++D G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MISTLVDKGAAYPATNGDVYFEVTKFDKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L+ S + +F+N +M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFKAYQQVYGQKTVETLEQSF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + E AL T+R + +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQA-------EQATALYSTLRQLTNILGLVQHDV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L + ++AL L++ ++ I+ R A+K K++ K+D IR+ L G+ L D+
Sbjct: 408 DEFLKSDIGQEALT---LSDTEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTIWRRA 472
>gi|28897924|ref|NP_797529.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|260364387|ref|ZP_05777025.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|260877081|ref|ZP_05889436.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|260895742|ref|ZP_05904238.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|417320155|ref|ZP_12106701.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
gi|31076996|sp|Q87QJ9.1|SYC_VIBPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|28806138|dbj|BAC59413.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|308088338|gb|EFO38033.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|308093754|gb|EFO43449.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|308115166|gb|EFO52706.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|328473118|gb|EGF43966.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
Length = 460
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 300/485 (61%), Gaps = 29/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R + H D L+ P VEPR + + I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCESLTERLIGDMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY D GDV F V KF EYG+LS + L+ +AG RV +++ K++P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L A A + ++ + F A+M
Sbjct: 302 LNYSEDNLNQARASLERLYTSL----RGLDLNAAPAGGE-----------EYVSRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L + +E + L +R + V+G++ Y
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KTESVEKASELGALMRELADVIGIL---Y 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L+ A ++ E + L ++ R +R +K++ +D R L +GI L D P
Sbjct: 396 QDPEAFLKGNAGNDDEVAEIEALIKL--RNDSRASKDWANADMARDKLTEMGIVLEDGPE 453
Query: 555 GTTWR 559
GTTWR
Sbjct: 454 GTTWR 458
>gi|260902702|ref|ZP_05911097.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
gi|308108249|gb|EFO45789.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
Length = 460
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 300/485 (61%), Gaps = 29/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R + H D L+ P VEPR + + I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCESLTERLIGDMHADFDALNMKRPDVEPRATQFISEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY D GDV F V KF EYG+LS + L+ +AG RV +++ K++P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L A A + ++ + F A+M
Sbjct: 302 LNYSEDNLNQARASLERLYTSL----RGLDLNAAPAGGE-----------EYVSRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L + +E + L +R + V+G++ Y
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KTESVEKASELGALMRELADVIGIL---Y 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L+ A ++ E + L ++ R +R +K++ +D R L +GI L D P
Sbjct: 396 QDPEAFLKGNAGNDDEVAEIEALIKL--RNDSRASKDWANADMARDKLTEMGIVLEDGPE 453
Query: 555 GTTWR 559
GTTWR
Sbjct: 454 GTTWR 458
>gi|153839789|ref|ZP_01992456.1| cysteinyl-tRNA synthetase, partial [Vibrio parahaemolyticus AQ3810]
gi|149746697|gb|EDM57685.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
Length = 463
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 300/485 (61%), Gaps = 29/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 5 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 64
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R + H D L+ P VEPR + + I
Sbjct: 65 TFVRNITDIDDKIIKRAAENGESCESLTERLIGDMHADFDALNMKRPDVEPRATQFISEI 124
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY D GDV F V KF EYG+LS + L+ +AG RV +++ K++P DF
Sbjct: 125 IELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 184
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 185 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPHHENEIAQ 244
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 245 SCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 304
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L A A + ++ + F A+M
Sbjct: 305 LNYSEDNLNQARASLERLYTSL----RGLDLNAAPAGGE-----------EYVSRFTAAM 349
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L + +E + L +R + V+G++ Y
Sbjct: 350 NDDFNTPEAYSVLFDMAREVNRL--------KTESVEKASELGALMRELADVIGIL---Y 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L+ A ++ E + L ++ R +R +K++ +D R L +GI L D P
Sbjct: 399 QDPEAFLKGNAGNDDEVAEIEALIKL--RNDSRASKDWANADMARDKLTEMGIVLEDGPE 456
Query: 555 GTTWR 559
GTTWR
Sbjct: 457 GTTWR 461
>gi|148980442|ref|ZP_01816064.1| cysteinyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
gi|145961245|gb|EDK26558.1| cysteinyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
Length = 461
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 301/485 (62%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RANE GE SL+ R E H D L+ P VEPR ++ + I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY +GDV F V KF EYG+LS + L+ +AG RV VDS K++P DF
Sbjct: 122 IELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
+WK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VVWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR ++ Y +R FL+ HYRS
Sbjct: 242 SCCAHGTDYVNTWMHSGMVMVDREKMSKSLGNFFTIRDLLAHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L A A + ++ F +M
Sbjct: 302 LNYSEDNLNQARASLERLYTSL----RGLDLTAAPAGGE-----------EYVTRFSTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L + + IN + + +E + L +R + ++G++
Sbjct: 347 NDDFNTPEAYSVLFEMAREINRI--------KTESIEKASGLGALMRELADIIGILHQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ + A ++ E + L ++ R +R +K++ +D R L +GI L D P
Sbjct: 398 PEAFLQ-GDAAGNDDEVAEIEALIKL--RNDSRASKDWANADLARDKLNELGIVLEDGPE 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|417840824|ref|ZP_12486932.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19501]
gi|341950635|gb|EGT77222.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19501]
Length = 459
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/488 (45%), Positives = 290/488 (59%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ YRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAQYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +++ A A F F +M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQS-----AVAFGGE----------NFVEAFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + IN L + +E L +R + +LG
Sbjct: 347 DDDFNTPNALSVLFEMAREINKL--------KTEDVEKANGLAARLRELGAILG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LLQ + +A +D+V + I+ R AR K++ +DA R +L +GI L D
Sbjct: 393 ---LLQQEPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWSAADAARNELTVMGIVLED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPNGTTWR 457
>gi|386388850|ref|ZP_10073696.1| cysteine--tRNA ligase [Haemophilus paraphrohaemolyticus HK411]
gi|385696993|gb|EIG27453.1| cysteine--tRNA ligase [Haemophilus paraphrohaemolyticus HK411]
Length = 459
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/490 (44%), Positives = 292/490 (59%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR+ GY +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
CYVRN TDVDDKII RA E E L R E H+D L+ L P VEPR + H+ I
Sbjct: 62 CYVRNITDVDDKIIKRAIENNETCDQLVDRMIAEMHKDFDALNILRPDVEPRATHHISEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ +++ NG AY DGDV F V+ FP+YG LS + L+ +AG RV + S KKNP DF
Sbjct: 122 IAMVEKLIANGHAYVAADGDVMFDVESFPKYGALSRQNLDQLQAGARVEIKSVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP WESPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + ++++YW+H G +TID EKMSKSLGNFF+IR +++LY +LR F + HYRS
Sbjct: 242 SCCANHGNYVNYWLHTGMLTIDKEKMSKSLGNFFSIRYMLDLYDAESLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YS+ L A + +Y L C+ ++P ++ F +M
Sbjct: 302 LDYSIDNLNLARSALERLYTALRGCDL------------TVP---AKGGEQYVEAFKTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA L + + +N L + E+ L ++ + VLG
Sbjct: 347 DDDFNTPGALAVLFEIAREVNKL--------KTEDAETANGLAVCLKELAGVLG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LL+ + + D +D+ + I+ R A+ K + +D +R L A+ I L D
Sbjct: 393 ---LLEQDPETFLKGDANDDEAAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLED 449
Query: 552 SPVGTTWRPA 561
+P GTTWR +
Sbjct: 450 TPNGTTWRKS 459
>gi|350552639|ref|ZP_08921836.1| cysteinyl-tRNA synthetase [Thiorhodospira sibirica ATCC 700588]
gi|349793570|gb|EGZ47402.1| cysteinyl-tRNA synthetase [Thiorhodospira sibirica ATCC 700588]
Length = 466
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/488 (44%), Positives = 298/488 (61%), Gaps = 29/488 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++RK++ P G V MYVCG+T YD H+GHARV V FDV+YRYL+ G+ V
Sbjct: 2 LHIYNSLTRKKDPFIPLTPGHVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLQAQGFNV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA + E L+ R+ H+D L+ LPP+ EPR + H+ I
Sbjct: 62 TYVRNITDIDDKIIQRAAQNHEPIEQLTERFIAAMHEDAQALNILPPTHEPRATQHIQPI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI Q+L G AY+ + D+Y++V+ F +YG+LSGR+LED RAG RV D K++P DF
Sbjct: 122 LHMIEQLLAKGHAYQASNQDIYYAVNSFKDYGKLSGRQLEDLRAGARVEPDEAKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W+SPWG GRPGWHIECSAMS +YLG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKRAKPGEPSWDSPWGLGRPGWHIECSAMSGSYLGQHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ + ++++YW+HNGFV ++ EKMSKSLGNFFT+R+++ Y +R F++G+HY+SP
Sbjct: 242 SEASHDCTYVNYWMHNGFVRVNEEKMSKSLGNFFTVREILARYQAEEVRYFILGSHYKSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINK---FHNDFL 431
+NY QLE A + +Y L ++ PP T + ++ + F
Sbjct: 302 LNYGDEQLEQARNALTRLYTALRGLDRQ-------------PPTTQSEQDQTQAYRQRFH 348
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A+M DD +T LA L + IN R + + LAA T+ + +LGL++
Sbjct: 349 AAMDDDFNTPEALAVLFELAHEIN-----RVRSQDPAYAQYLAA---TLYQLGGILGLLT 400
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
L A E + QR++ AR +K++ ++D IR L GI L D
Sbjct: 401 QDPQSYLQSGSGSDTIDASQIETLIAQRLQ----ARADKDWPEADRIRDHLKTQGIILED 456
Query: 552 SPVGTTWR 559
S TTWR
Sbjct: 457 SGNTTTWR 464
>gi|333985593|ref|YP_004514803.1| cysteinyl-tRNA synthetase [Methylomonas methanica MC09]
gi|333809634|gb|AEG02304.1| cysteinyl-tRNA synthetase [Methylomonas methanica MC09]
Length = 471
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/486 (45%), Positives = 290/486 (59%), Gaps = 35/486 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R ++ P+ GKVGMYVCG+T YD HIGHARV V FD + RYLRH GY++
Sbjct: 16 LKIYNTLTRSKQEFIPRQPGKVGMYVCGMTVYDYCHIGHARVMVVFDTVARYLRHAGYQL 75
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GED +L+ R+ E H+D L LPP +EP+ + + I
Sbjct: 76 TYVRNVTDIDDKIIQRANENGEDFAALTERFIEAMHEDERALAVLPPDIEPKATQSIADI 135
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+MI ++ +AY +GDV+++V++F YG+LSG+ +ED AGERV VD+ K++P DF
Sbjct: 136 INMIAALIGREYAYVGANGDVFYAVNRFQGYGKLSGKNIEDLNAGERVDVDNAKRDPLDF 195
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP+WESPWG GRPGWHIECSAMS LG+ FDIHGGGMDL FPHHENEIAQ
Sbjct: 196 VLWKMAKPGEPYWESPWGHGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQFPHHENEIAQ 255
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A ++YW+HNGFV ++ EKMSKSLGNFFT+R V++ Y P +R F++ +HYRSP
Sbjct: 256 SEGATGEPFVNYWMHNGFVRVNEEKMSKSLGNFFTVRDVLKQYRPEVIRFFILSSHYRSP 315
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS QL+ A + +Y L + + ++D D + F +M
Sbjct: 316 LNYSDEQLDDAGVALTRLYTAL----RGVDIVDVEIDAD------------YKQRFEQAM 359
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T V LA L D + +N + K + G + G
Sbjct: 360 DDDFNTPVALAVLFDLARELN-----KADDKTVLAATLKQLAGLLGLLQDDPDGFLKGGA 414
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L E + Q I R A+ NK++ ++DAIR L GI L D
Sbjct: 415 GS------------ESLAEAAIEQLIAARKAAKANKDWAQADAIRDQLKGQGIVLEDVAG 462
Query: 555 GTT-WR 559
G T WR
Sbjct: 463 GNTIWR 468
>gi|339487907|ref|YP_004702435.1| cysteinyl-tRNA synthetase [Pseudomonas putida S16]
gi|431802924|ref|YP_007229827.1| cysteinyl-tRNA ligase [Pseudomonas putida HB3267]
gi|338838750|gb|AEJ13555.1| cysteinyl-tRNA synthetase [Pseudomonas putida S16]
gi|430793689|gb|AGA73884.1| cysteinyl-tRNA ligase [Pseudomonas putida HB3267]
Length = 460
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/487 (45%), Positives = 285/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LTIYNTLSKTKETFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R + H+D L+ LPP EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWGPGRPGWHIECS MS LG SFDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVASHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P +F F +M
Sbjct: 302 INYSEDSLRDAKGALERFYHALR----------------GLPRVAAKGGEEFVERFSVAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L D ++ IN L + +E+ A L +R + VLG++
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRES--------DVEAAAGLAGRLRELGDVLGVLQLEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LR A + D E + L I+ R AR +K + +SD IR L A+G+ L D
Sbjct: 398 DDF---LRAGAEGKVDAAEVEGL--IQARLQARADKNWAESDRIRDQLTAMGVVLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|282857764|ref|ZP_06266973.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
gi|282584434|gb|EFB89793.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
Length = 474
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/486 (43%), Positives = 302/486 (62%), Gaps = 19/486 (3%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN ++RK+E P EGKV Y CG T YD HIG+AR ++ FDVL RYL GYEV
Sbjct: 3 LALYNDLTRKKEPFVPLHEGKVAFYSCGPTVYDYFHIGNARPFIVFDVLRRYLEFRGYEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTD+DDK+IARAN G L+ + ++++D L S PR ++++P I
Sbjct: 63 TFVQNFTDIDDKMIARANRDGVTVQQLAEKTIADYYEDADALGIKRASFYPRATEYIPKI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I MI +I+DNG AY DG V+F V FP YG+LS + L+D ++G R+ VD K++P DF
Sbjct: 123 IAMIQRIIDNGHAYVADGTVFFDVKSFPAYGKLSHQNLDDLQSGARIEVDDVKRSPLDFV 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK K GEP WESPWG GRPGWHIECSAMS LG + DIH GG+DLVFPHHENEIAQ+
Sbjct: 183 LWKPQKPGEPAWESPWGLGRPGWHIECSAMSTDLLGDTVDIHTGGIDLVFPHHENEIAQT 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA + YW+HN ++ I++EKMSKSLGNF T R + + PLA+R+F++G HYRSPI
Sbjct: 243 EAATGKPFVKYWLHNEYILINAEKMSKSLGNFLTARAARQKFPPLAIRMFMLGAHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDS--IPPDTVTSINKFHNDFLAS 433
N++ LE A+ + + L +C L L ++ + +++ F DF A+
Sbjct: 303 NFTPEGLEQAAAAV----ERLRNCWSDLQFAKGGRLGETSAAGAALMAALDTFRADFTAA 358
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T + + + + +N L KG ++ + ++AA EK ++ +V+G++
Sbjct: 359 MDDDFNTAAAIGVIFEAVTEVNKYL---KGNEK-LDPAAVAAAEKFFGDIDSVMGIIGIE 414
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+EK + D ++ I +R ARK +++++SDAIR +LAA GI L D+P
Sbjct: 415 --------QEKKEESGDEAA-RIEPLIAERNAARKARDFKRSDAIRDELAAQGIILEDTP 465
Query: 554 VGTTWR 559
GT W+
Sbjct: 466 QGTKWK 471
>gi|30248074|ref|NP_840144.1| cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
gi|61216300|sp|Q82Y45.1|SYC_NITEU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|30179959|emb|CAD83954.1| Cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
Length = 465
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/491 (44%), Positives = 298/491 (60%), Gaps = 36/491 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +Y+T++R R P G+V MYVCG+T YD H+GHARV V FD + R+L+ LGY+V
Sbjct: 2 LKIYDTLTRSRREFIPLTPGEVRMYVCGMTVYDYCHLGHARVLVVFDSVVRWLQTLGYKV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E +L+ RY + +D + L + PS EPR ++++ +
Sbjct: 62 IYVRNITDVDDKIIRRALENHEPFSALTARYIQAMEEDAMALGVISPSFEPRATEYVDSM 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +L+ AY +GDV++ V +FP YG+LSG+ L+D RAGERV +D+ K++P DF
Sbjct: 122 IAMIESLLNRELAYVASNGDVFYDVRRFPGYGKLSGKSLDDLRAGERVEIDTNKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK EP W+SPWG GRPGWHIECSAMS YLG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPDEPSWDSPWGKGRPGWHIECSAMSEHYLGDQFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S +SH++YW+HNGFV +D+EKMSKSLGNFFT+R+V+ Y P +R F++ HYRSP
Sbjct: 242 SEGVHGHSHVNYWMHNGFVRVDNEKMSKSLGNFFTVREVLTRYQPEVVRFFIVRAHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTL------HDCEKALSLLDAAALKDSIPPDTVTSINKFHN 428
+NYS L A + +Y L D E A +++D N +
Sbjct: 302 LNYSDAHLNDARSALERLYTVLKNHAPSQDSEVATAVIDWEN-------------NVYAR 348
Query: 429 DFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLG 488
F+++M+DD +T +A L D N R G A+L K + VL +L
Sbjct: 349 RFMSAMNDDFNTPEAVAVLFDLASEAN-----RTGDSH------YASLLKALGGVLGLLQ 397
Query: 489 LMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIA 548
Y + L++ + +++ I+ R ARK + + ++D +R+ LA GI
Sbjct: 398 QPPQQYLQYPAHLQD-----GQYSVEEIENMIQQRLQARKERNFAQADTLRQQLAEAGII 452
Query: 549 LMDSPVGTTWR 559
L DSP GTTWR
Sbjct: 453 LEDSPQGTTWR 463
>gi|297618406|ref|YP_003703565.1| cysteinyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297146243|gb|ADI03000.1| cysteinyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 539
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/533 (40%), Positives = 312/533 (58%), Gaps = 55/533 (10%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+SR++E + KV MYVCG T Y+ H+G+AR V FD++ RYL++ GYEV Y
Sbjct: 4 VYNTLSRRKERLNTLEPNKVKMYVCGPTTYNYIHLGNARPLVVFDIIRRYLQYKGYEVTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII R+ E G+ ++ +Y +E+ +D L PRVSDH+P II
Sbjct: 64 VQNFTDVDDKIIQRSQEEGKSAAEVAGKYIDEYFRDADALGVKRADYHPRVSDHIPDIIR 123
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++ G+AYR+ GDVY+ V F YGQLSGR LE+ AG RV VD RK++P DFALW
Sbjct: 124 VIETLVEKGYAYRIGGDVYYRVRAFERYGQLSGRSLEEMLAGARVEVDERKEDPMDFALW 183
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K AK GEP WESPWGPGRPGWHIECS M+ YLG + DIHGGG DLVFPHHENEIAQS A
Sbjct: 184 KEAKPGEPAWESPWGPGRPGWHIECSVMAMKYLGETLDIHGGGADLVFPHHENEIAQSEA 243
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+HNGF+T++ EKMSKSLGNFF +R+++ Y +R +L THYRSP+++
Sbjct: 244 YSGRPFVRYWLHNGFITVNKEKMSKSLGNFFILREILSQYPAEVVRFYLGSTHYRSPLDF 303
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDT--VTSINKFHNDFLASMS 435
+LE A + + TL + + + A ++ D V+ +++ F +M
Sbjct: 304 DNTKLEEAGRALARLNNTLRRLNEVVKNEEVEANDETRDADKGFVSRLHELKEKFEVAMD 363
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLT-----VLGLM 490
DD +T + L D + IN L +G+ + ++ AA+++ R V T +LG +
Sbjct: 364 DDFNTAQAIGYLFDMAREINAYLDFWEGEGSS---KAPAAIKEAYR-VFTLLGGNILGFL 419
Query: 491 STGYS-----------EVLLQLREKALKRADLTE-DQVLQ-------RIED--------- 522
S + E+L +++E+AL+ L +++L IED
Sbjct: 420 SEDFEHKGHGISDKVIEILFEMKEEALESGSLERVERILSCLQSAGIEIEDTFSGSTWRA 479
Query: 523 ----------------RTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWR 559
R+ AR+NK++ +D IR +L +G+ + D+ G WR
Sbjct: 480 NRPVNVSDLIEPLLSWRSEARRNKDFTTADVIRDNLKKIGVVVEDTREGARWR 532
>gi|254252008|ref|ZP_04945326.1| Cysteinyl-tRNA synthetase [Burkholderia dolosa AUO158]
gi|124894617|gb|EAY68497.1| Cysteinyl-tRNA synthetase [Burkholderia dolosa AUO158]
Length = 465
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/489 (46%), Positives = 300/489 (61%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R +++ P+ G+V MYVCG+T YD H+GHAR+ V FD++ R+LR +GY V
Sbjct: 4 LRIYNTLARDKQVFVPRRSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYRV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+ R+ H+D L P +EPR + +P +
Sbjct: 64 TYVRNITDIDDKIIRRAVENGETIKSLTDRFIGAMHEDEDALGIQRPDIEPRATQFIPQM 123
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI Q+ NG+AY+ DGDV +SV KF YG+LSG+ L+D RAGERVA + K++P DF
Sbjct: 124 LGMIEQLESNGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLDF 183
Query: 255 ALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AK +P WES +G GRPGWHIECSAM LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKRAKPEDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGFV +D+EKMSKSLGNFFTIR+V+E Y +R F++ THY
Sbjct: 244 IAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVVRFFIVRTHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RSP+NYS V L+ A + +Y L D E DA AL S P F
Sbjct: 304 RSPLNYSDVHLDDARASLTRLYTALKDVEP-----DALALDWSEP---------HAQRFA 349
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A+M+DD +T V +A L + +N TR A+L + ++ + +LGL+
Sbjct: 350 AAMNDDFNTPVAIATLFELAGEVN---RTRD-----------ASLARQLKQLAGLLGLLG 395
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LQ A + L D++ +I R A++ K+Y ++D IR +L GIAL D
Sbjct: 396 R-EPRAFLQQASGAARDGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALED 454
Query: 552 SPVGTT-WR 559
P G+T WR
Sbjct: 455 KPGGSTEWR 463
>gi|392309602|ref|ZP_10272136.1| cysteinyl-tRNA synthetase [Pseudoalteromonas citrea NCIMB 1889]
Length = 459
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/487 (45%), Positives = 286/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++ KP VEGKV MYVCG+T YD H+GHAR YV+FDV+ RY RHLGY+V
Sbjct: 2 LQIYNTLTRQKTPFKPLVEGKVDMYVCGITIYDFCHVGHARTYVSFDVMNRYFRHLGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E ED +L+ R + H+D L+ LP +EP V+ HM I
Sbjct: 62 TYVRNITDVDDKIIKRAAENNEDINALTVRMTKAMHEDFDALNILPADIEPTVTGHMDEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+MI +++ G AY GDV F V F +YGQLS + LE +AG RV V K +P DF
Sbjct: 122 IEMIERLITKGHAYVASSGDVLFDVSTFEQYGQLSQQNLEMLQAGARVEVAQDKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W SPWG GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWTSPWGEGRPGWHIECSAMSSKHLGDFFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++ WIH G V ++ EKMSKSLGNFFT+R+V++ Y +R FLI YRS
Sbjct: 242 SCCANNGRYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLKKYDRETVRYFLINGQYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS LE A + IY L E P + + N + F +M
Sbjct: 302 LNYSQENLEQARASLERIYTALRGVE---------------PVEVTLAGNSYVERFETAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T L + + K +N LL + + A L L + VLG+
Sbjct: 347 NDDFNTPEALPVIFELAKEVN-LLKDKDSEAAAKHAYILVMLGE-------VLGIAQQA- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ + + A ++ I R AR +K++ +D R L A+G+ L DS
Sbjct: 398 PESFLQGEQDNDEVA-----KIEALIVARNEARASKDWAAADVARDALTALGVVLEDSAG 452
Query: 555 GTTWRPA 561
TTWR A
Sbjct: 453 KTTWRKA 459
>gi|387902615|ref|YP_006332954.1| cysteinyl-tRNA synthetase [Burkholderia sp. KJ006]
gi|387577507|gb|AFJ86223.1| Cysteinyl-tRNA synthetase [Burkholderia sp. KJ006]
Length = 465
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/489 (45%), Positives = 300/489 (61%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R +++ P+ G+V MYVCG+T YD H+GHAR+ V FD++ R+LR +GY V
Sbjct: 4 LRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYRV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE SL+ R+ H D L P +EPR + +P +
Sbjct: 64 TYVRNITDVDDKIIRRAVENGESIKSLTDRFIGAMHDDEAALGIQRPDIEPRATQFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI Q+ NG+AY+ DGDV +SV KF YG+LSG+ L+D RAGERVA + K++P DF
Sbjct: 124 LGMIEQLEANGYAYQASDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLDF 183
Query: 255 ALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AK +P W S +G GRPGWHIECSAM LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKRAKAEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGFV +D+EKMSKSLGNFFTIR+V+E Y +R F++ THY
Sbjct: 244 IAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRFFIVRTHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RSP+NYS V L+ A + +Y L D E DA AL + P + F
Sbjct: 304 RSPLNYSDVHLDDARASLTRLYTALKDVEP-----DALALDWNEP---------YAQRFA 349
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A+M+DD++T V +A L + +N TR A+L + ++ + +LGL+
Sbjct: 350 AAMNDDINTPVAVATLFELAGEVN---RTRD-----------ASLARQLKQLAGLLGLLG 395
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LQ + + L D++ RI R A++ K+Y ++D IR +L GIAL D
Sbjct: 396 R-EPRAFLQQGAGSAQAGALAADEIEARIAARVAAKQAKDYAEADRIRAELLEAGIALED 454
Query: 552 SPVGTT-WR 559
P G+T WR
Sbjct: 455 KPGGSTEWR 463
>gi|417951842|ref|ZP_12594927.1| cysteinyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
gi|342803794|gb|EGU39143.1| cysteinyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
Length = 461
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 300/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RANE GE SL+ R E H D L+ P VEPR ++ + I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY +GDV F V KF EYG+LS + LE +AG RV V+S K++P DF
Sbjct: 122 IELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLEQLQAGARVDVESAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L A A + ++ F +M
Sbjct: 302 LNYSEDNLNQARASLERLYTSL----RGLDLTAAPAGGE-----------EYVTRFSTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L + + IN + + +E + L + + ++G++
Sbjct: 347 NDDFNTPEAYSVLFEMAREINRI--------KTESIEKASGLGALMCELADIIGILHQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ + A ++ E + L ++ R +R +K++ +D R L +GI L D P
Sbjct: 398 PEAFLQ-GDAAGNDDEVAEIEALIKL--RNDSRASKDWANADLARDKLNELGIVLEDGPE 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|257455309|ref|ZP_05620544.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
gi|257447271|gb|EEV22279.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
Length = 482
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/490 (46%), Positives = 302/490 (61%), Gaps = 29/490 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+Y++MS ++ P GKVGMYVCG+T YD HIGHARV V FDV+ R+LRH+GY+V Y
Sbjct: 12 IYDSMSGQKRPFTPLEAGKVGMYVCGMTVYDYCHIGHARVMVGFDVVVRWLRHIGYDVNY 71
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RA + GE L+ R+ + H+D +L C P+ EP+ +D +P +
Sbjct: 72 VRNITDIDDKIINRAKDNGESIYELTDRFIKAMHEDADNLGCERPNSEPKATDFIPQMQH 131
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
+I + AY+ GDVY++V+ F EYG+LS R+L D +AG ERV V++ KKNP DF
Sbjct: 132 LIQTLESKNLAYQGATGDVYYAVENFAEYGKLSKRRLADMQAGASERVNVETDKKNPFDF 191
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWKSAK+ EP W+SPWG GRPGWHIECSAMS LG +FDIHGGG DL FPHHENE
Sbjct: 192 VLWKSAKQTEPSETKWQSPWGVGRPGWHIECSAMSTCCLGDTFDIHGGGHDLQFPHHENE 251
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A ++ + W+H GF+ +D EKMSKSLGNFFTIR VM +HP +R F++ +HY
Sbjct: 252 IAQSEGATGKTYANNWMHVGFINVDGEKMSKSLGNFFTIRDVMGQFHPETIRFFILSSHY 311
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RSP+N+S L+ A + +YQ L E SL + A D P F F
Sbjct: 312 RSPVNFSDSALKEAQTSLTRLYQALKSVE---SLTEPAGEIDETP---------FETPFN 359
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDL--LHTRKGKKQAMRLESLAALEKTIRNVLTVLGL 489
+M DD ++ ++ L + IN L T +G QA+ +LA L K + L +L L
Sbjct: 360 QAMCDDFNSAGAVSVLFSLAREINKAVNLETVEGNAQAL---ALATLLKDLAQPLNILQL 416
Query: 490 MSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
T + L+ K + L++ ++ IE R A+ +K++ K+D IR DL A GI L
Sbjct: 417 NPTDF------LQAKVGETTGLSDSEIEAFIEARKQAKADKDFAKADQIRSDLKAQGIEL 470
Query: 550 MDSPVGTTWR 559
D GTTWR
Sbjct: 471 EDGKNGTTWR 480
>gi|407789635|ref|ZP_11136735.1| cysteinyl-tRNA ligase [Gallaecimonas xiamenensis 3-C-1]
gi|407206295|gb|EKE76253.1| cysteinyl-tRNA ligase [Gallaecimonas xiamenensis 3-C-1]
Length = 457
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/487 (45%), Positives = 296/487 (60%), Gaps = 32/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E +P V GKV +YVCG+T YDL HIGHAR YV FDV+ RYLRH GY+V
Sbjct: 2 LKVFNTLSREKETFQPLVPGKVSLYVCGITIYDLMHIGHARTYVAFDVINRYLRHKGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RANE GE +L+ R+ +D L+ LPP +EP+V+ HM I
Sbjct: 62 TYVRNITDVDDKIIKRANENGESCEALTERFATLMREDFAALNTLPPDIEPKVTTHMDDI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ ++D G AY+ D GDV F V F +YGQLS + L+ +AG RV V+ K++P DF
Sbjct: 122 IQMVKALVDRGHAYQADNGDVLFEVKSFEQYGQLSRQDLDALQAGARVDVEDAKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W SPWG GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKQAKPGEPKWASPWGEGRPGWHIECSAMSSRHLGPVFDIHGGGSDLTFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A YW+H+G V ++ EKMSKSLGNFFT+R V++++ +R FL+ +HYRS
Sbjct: 242 SCCASGQQFARYWLHSGMVQVNKEKMSKSLGNFFTVRDVLKVFDAETVRYFLLTSHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L L A + F A+M
Sbjct: 302 LNYSEDNLNQAKAALERLYTALKGVSAEAELAGDWAAR-----------------FDAAM 344
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L L + + +N KQ R + +A+L T++++ +LG++
Sbjct: 345 DDDFNTPEALVVLFELARELNK-------AKQEGRAD-VASLAATLKHLGGLLGVVQQA- 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ ++ DL + I R AR+++++ +DA R L A+G+ L D P
Sbjct: 396 PEAFLQGGDE-----DLDVAHIEGLIAKRNQARQDRDWAAADAARDALTALGVVLEDGPQ 450
Query: 555 GTTWRPA 561
GT+WR A
Sbjct: 451 GTSWRKA 457
>gi|296113612|ref|YP_003627550.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|416218561|ref|ZP_11624975.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|416234182|ref|ZP_11629731.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
gi|416238906|ref|ZP_11631589.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|416243700|ref|ZP_11634035.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC7]
gi|416247920|ref|ZP_11636012.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|416255849|ref|ZP_11639418.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis O35E]
gi|421780418|ref|ZP_16216907.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|295921307|gb|ADG61658.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BBH18]
gi|326559609|gb|EGE10023.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|326565528|gb|EGE15699.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
gi|326567711|gb|EGE17817.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|326568652|gb|EGE18723.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC7]
gi|326568779|gb|EGE18849.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|326575029|gb|EGE24958.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis O35E]
gi|407812574|gb|EKF83359.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
Length = 480
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/489 (43%), Positives = 303/489 (61%), Gaps = 22/489 (4%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
+QL LY+T+S + KP G++G+YVCG+T YD H+GHARV V FDV+ R+LR +GY
Sbjct: 9 SQLQLYDTLSASKRPFKPIHAGQIGIYVCGMTVYDYCHMGHARVMVGFDVIVRWLRAIGY 68
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
+V YVRN TD+DDKII RA + GE L+ R+ HQD L C P++EPR ++H+
Sbjct: 69 QVNYVRNITDIDDKIIQRAYDNGETITELTDRFITAMHQDEQFLGCQSPNIEPRATEHIE 128
Query: 194 HIIDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKN 250
++ +I +L AY+ GDVY++++KFP YG+LS R ++D +AG ERV+ K++
Sbjct: 129 NMQHLIDVLLTKNLAYQGSGGDVYYAIEKFPNYGKLSKRHVDDMQAGASERVSTAEDKRH 188
Query: 251 PADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHEN 310
P DF LWK+AK EP W+SPWG GRPGWHIECSAMS LG +FDIHGGG DL FPHHEN
Sbjct: 189 PFDFVLWKTAKPSEPHWQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGHDLQFPHHEN 248
Query: 311 EIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTH 370
EIAQS A ++ ++W+H GF+ ID EKMSKSLGNFFTIR+V++ +HP +R FL+ +H
Sbjct: 249 EIAQSEGATGKTYANHWMHMGFINIDGEKMSKSLGNFFTIREVVDKFHPETIRFFLLSSH 308
Query: 371 YRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDF 430
YRSP+N+S L+ + + IYQ+L E + SI P+ S + F
Sbjct: 309 YRSPVNFSDTALKESHTALSRIYQSLKSAENFGVI--------SIMPNAWES--EAGQAF 358
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
+M+DD +T ++ L + IN + + G+ Q E+ T++ + +VL +
Sbjct: 359 AKAMNDDFNTPKAVSVLFSVVTEINRAM--KAGEYQKATQEA-----STLKTLASVLNIA 411
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
+ E L K L++ ++ +I R A+ K + K+DAIR +L GI L
Sbjct: 412 QSSPHEFLQA--NIGNKPDGLSDAEIANKIAQRQQAKAQKNFAKADAIRDELNRQGIELE 469
Query: 551 DSPVGTTWR 559
D +GTTWR
Sbjct: 470 DGRMGTTWR 478
>gi|350570254|ref|ZP_08938622.1| cysteine--tRNA ligase [Neisseria wadsworthii 9715]
gi|349797303|gb|EGZ51070.1| cysteine--tRNA ligase [Neisseria wadsworthii 9715]
Length = 469
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/504 (43%), Positives = 296/504 (58%), Gaps = 54/504 (10%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY +
Sbjct: 2 LTVYNTLTRQKEQFVPLNPQNVRMYVCGMTVYDYCHLGHARVMVVFDIIARWLRQCGYPL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARA E GE L+ R+ + ++D L + P VEP+ ++H+ +
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMNEDAAALGVIRPDVEPKATEHVRQM 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI +++DNG AY + GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF
Sbjct: 122 LAMIQRLIDNGKAYPAENGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK EP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPSEPAWESPWGQGRPGWHIECSAMSEELFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAA----CNN--------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLAL 362
SC A C + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR V++ Y +
Sbjct: 242 SCGAHGGSCGHNHGGKTIESHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLKAYDAEVV 301
Query: 363 RLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTS 422
R F++ HYRSP+NYS L+ A + +Y ALK++ P + S
Sbjct: 302 RFFILRAHYRSPLNYSDAHLDDAKGALTRLY---------------TALKNTPPAECAVS 346
Query: 423 --INKFHNDFLASMSDDLHT---TVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALE 477
N + F A+M+DD T VVL L++ + N+ A L
Sbjct: 347 ENTNDYTRRFFAAMNDDFGTVEAVVVLFELANEVNKTNN-----------------AELA 389
Query: 478 KTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDA 537
++ + +++GL+ E L + L+ +++ I R AR K + +SD
Sbjct: 390 GCLKALSSIIGLLERDPLEFL----QGCAASGSLSNEEIENLIAQRKQARAEKNWAESDR 445
Query: 538 IRKDLAAVGIALMDSPVGTTWRPA 561
IR L A I L D GTTWR A
Sbjct: 446 IRDLLTAENIILEDGANGTTWRRA 469
>gi|302872638|ref|YP_003841274.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302575497|gb|ADL43288.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 465
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/480 (42%), Positives = 297/480 (61%), Gaps = 24/480 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT+S+ +E +P + KV MYVCG T YD HIG+AR + FD L RY + GYEV Y
Sbjct: 3 LYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEVIY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTD++DK+I RAN+ G L+ R+ +E+++D L+ + PR ++ +P +I
Sbjct: 63 IQNFTDIEDKMINRANKEGITVFELAERFIKEYYKDADRLNVKRATKNPRATEEIPDMIV 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++D G+AY VDGDVYF KF EYG+LS + +E+ AG RV + +K++P DFALW
Sbjct: 123 LIQKLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELVAGARVDLSEKKEDPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W SPWG GRPGWHIECS M+ YLG + DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KAKKEGEPAWFSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A +WIHNG+V I++EKMSKSLGNFFT+R+++E YHP ALRLF++ HYR P+N+
Sbjct: 243 ATGKPFARFWIHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPLNF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV-TSINKFHNDFLASMSD 436
S+ +E A + IY C + L L S D + T I + F+ +M D
Sbjct: 303 SLDLIEQAEVALKRIYT----CYENLEFLIQNETSSSENNDKLKTVIEQLKAKFIEAMED 358
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
DL+T L + ++ IN H K E+L + ++ + ++LG++
Sbjct: 359 DLNTAEATGYLFEMVREIN--THANFCSK-----ETLTFAKDVLKELCSILGIL------ 405
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
E+ + + ++L +E R ARK K + ++D IR +L ++G ++D+P GT
Sbjct: 406 ------EQYSSKEEYVPQEILDMVEKRNQARKLKNFAEADRIRDELKSLGYIVLDTPQGT 459
>gi|418292296|ref|ZP_12904242.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379063725|gb|EHY76468.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 461
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/487 (46%), Positives = 288/487 (59%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E P KV MYVCG+T YD HIGHARV V FDV+ R+LRH GY+V
Sbjct: 3 LSIYNTLSKTKEAFHPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA+E GE +L R H+D L+ L P +EPR +DH+ +
Sbjct: 63 TYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDETRLNVLRPDIEPRATDHIAGM 122
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D GFAY +GDVY+ V KF YG+LS RK+ED + G R+ VD K++P DF
Sbjct: 123 HTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKEDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W+SPWG GRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 183 VLWKGAKPGEPSWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 243 SEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P T ++F F +M
Sbjct: 303 INYSEDSLREAKGALERFYNGLK----------------GLPEATPGGGDEFIARFGVAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L + ++ +N L + +LAA K + VL VL L +
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLRES-----DLAAAAALAARLKELAGVLGVLQLEPEAF 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ + D TE + L I R AR K + +SD IR+ L A+G+ L D
Sbjct: 402 ------LQAGGAGKVDATEVEAL--IAARLTARAEKNWAESDRIREQLTAMGVVLEDGKG 453
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 454 GTTWRLA 460
>gi|50084652|ref|YP_046162.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
gi|61216194|sp|Q6FC71.1|SYC_ACIAD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|49530628|emb|CAG68340.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
Length = 473
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/488 (44%), Positives = 297/488 (60%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ G + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKPGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWDVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE E L+ R+ + ++D L C P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENNETIQQLTSRFIDAMNEDAAKLGCAEPDEAPKATEYIGEMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI+ ++D G AY +GDVYF V KF +YG+LSGRKLED +AG ERV ++ KK+P DF
Sbjct: 126 MISTLVDKGSAYPASNGDVYFEVSKFEKYGRLSGRKLEDMQAGASERVDIEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 186 VLWKGAKPNEPSWVSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLTFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y E+ D+ +F F +M
Sbjct: 306 VNFSDVALKEAKTALTRFYHAFKAYEQVYG-----------QNDSTQKDEQFIERFNIAM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + + +N R K+Q + E A T+R++ +LGL+
Sbjct: 355 RDDFNTPEAIAVLFELNRELN-----RAVKEQ--QAEQAAIYYVTLRHLTQILGLVQHDV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L + ++ L L++D++ I+ R A+K K++ +DAIR+ L G+ L D+
Sbjct: 408 DEFLKSDIGQEVLS---LSDDEIQAMIQQRADAKKAKDFSGADAIRQALLDQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTLWRRA 472
>gi|392538778|ref|ZP_10285915.1| cysteinyl-tRNA ligase [Pseudoalteromonas marina mano4]
Length = 459
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/485 (46%), Positives = 291/485 (60%), Gaps = 30/485 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E KP V+GK+ MYVCG+T YD HIGHAR +V FDV+ RYLRH+GY + Y
Sbjct: 4 IYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYNLKY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TDVDDKII RANE E L+ R + H+D L+ L P VEP V+ HM II+
Sbjct: 64 VRNITDVDDKIIKRANENKESINDLTLRMTKAMHEDFDSLNMLRPDVEPTVTGHMGEIIE 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
M+ +++ G AY DGDV F V F +YG LS + L ++G RV V K +P DF L
Sbjct: 124 MVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK GEP W SPWG GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHENEIAQSC
Sbjct: 184 WKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQSC 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A N +++ WIH G V ++ EKMSKSL NFFT+R V++ Y P ++R FLI HYRS +N
Sbjct: 244 CANNGEYVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVLKEYDPESVRYFLISGHYRSQLN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L+ A + IY AL+D P + N+F F +M D
Sbjct: 304 YSQENLDQARSSLERIY---------------TALRDVKPIECELESNEFVIKFRKAMDD 348
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T L L + K +N R + A++ LA + +TI VL V + E
Sbjct: 349 DFNTPEALPVLFELAKELN-----RVKESDAIQAGQLAFILRTIGEVLGV----AQQAPE 399
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
LQ + + A + E +++R E AR +K++ +D R L A+G+ L DS T
Sbjct: 400 AFLQGGQDDNEVATI-EALIVKRNE----ARASKDWAAADEARDALNALGVILEDSAGKT 454
Query: 557 TWRPA 561
TWR A
Sbjct: 455 TWRKA 459
>gi|424807047|ref|ZP_18232455.1| cysteinyl-tRNA synthetase [Vibrio mimicus SX-4]
gi|342324989|gb|EGU20769.1| cysteinyl-tRNA synthetase [Vibrio mimicus SX-4]
Length = 459
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 298/485 (61%), Gaps = 30/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP V GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E E SL+ R +E + D L+ P V PR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVGPRATAYIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY D GDV F V K+ EYG+LS + LE +AG RV V++ K++P DF
Sbjct: 122 IALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEAAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L L S+P ++ + F A+M
Sbjct: 302 LNYSEENLNQARASLERLYNALR------------GLDRSVP---AAGGEEYLSRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L ++ L + +AL +R + V+G++ Y
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KSEDLTNASALGSLMRELADVIGIL---Y 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E + A D +Q+ I+ R +R K++ +D R L +GI L D P
Sbjct: 396 QEPETFFQGSA---EDEEAEQIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLEDGPN 452
Query: 555 GTTWR 559
GTTWR
Sbjct: 453 GTTWR 457
>gi|410666863|ref|YP_006919234.1| cysteinyl-tRNA synthetase [Thermacetogenium phaeum DSM 12270]
gi|409104610|gb|AFV10735.1| cysteinyl-tRNA synthetase CysS [Thermacetogenium phaeum DSM 12270]
Length = 507
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/508 (43%), Positives = 301/508 (59%), Gaps = 29/508 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+SR++E P V +V MYVCG T Y+ H+G+AR V FD + RYL + GY V
Sbjct: 3 LMVYNTLSRRKEEFVPGVN-QVRMYVCGPTTYNFIHLGNARALVVFDTIRRYLEYKGYRV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YV+NFTD+DDKII RA E L+ +Y E+ +D L +V PR S+H+P +
Sbjct: 62 KYVQNFTDIDDKIINRAREENTSARELAEKYIGEYFRDADALRVKRATVHPRASEHIPEM 121
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
IDM+ + + G AY GDVYFSV FP YG+LSGR LE+ AG RV VD RK++P DF
Sbjct: 122 IDMVRVLCEKGIAYEYGGDVYFSVRSFPGYGKLSGRTLEEMLAGARVEVDERKRDPLDFV 181
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+AK GEPFWESPWG GRPGWH+ECS MS YLG FDIHGGG DL+FPHHENEIAQ+
Sbjct: 182 LWKAAKPGEPFWESPWGAGRPGWHLECSVMSLKYLGFGFDIHGGGSDLIFPHHENEIAQA 241
Query: 316 CA-ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
A A + YW+HNGFVT+D EKMSKSLGNFF +R +++ + P LR FL+ THYRSP
Sbjct: 242 EAYAGSEPFARYWVHNGFVTVDEEKMSKSLGNFFLVRGLLQEWAPEILRFFLLSTHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLH-------DCEKALSLLDAAALKDSIPPDTVTSINKFH 427
++++ L++A + + TL D + + A ++ + +F
Sbjct: 302 LDFNDAALKNARKSFNRLGNTLDLLNDTVGDGQGKKTAGRLAREAEAFRSRVADCVAQFE 361
Query: 428 NDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVL 487
+M DD +T + LAAL + + IN ++ + + L LA + + N+L VL
Sbjct: 362 E----AMDDDFNTALALAALFNMGREINGFINGDQFQPTPGVLYLLAQIREYYLNLLDVL 417
Query: 488 GLMSTGYSEVLLQLREKALKRADLTEDQVLQRIED----------------RTVARKNKE 531
GL+ E+ + R+ ++ A +D+ R+ D R AR+ K
Sbjct: 418 GLVPGEKRELGEEYRQPLIRIALSLKDEAGGRLPDRLPDGPRELLELLLKIRREARQQKN 477
Query: 532 YEKSDAIRKDLAAVGIALMDSPVGTTWR 559
Y+ SDA+R L GI + D+P GT WR
Sbjct: 478 YQLSDALRDALREEGIIIEDTPRGTRWR 505
>gi|423692284|ref|ZP_17666804.1| cysteine--tRNA ligase [Pseudomonas fluorescens SS101]
gi|388002211|gb|EIK63540.1| cysteine--tRNA ligase [Pseudomonas fluorescens SS101]
Length = 460
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/487 (45%), Positives = 287/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD HIGH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+ K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKATKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPAVAPAGGEAFVARFTEVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L + ++ IN L T +++ A L ++ + +VLG++
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRET--------DIDAAAGLAARLKELASVLGVLQMEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L+ A R D E L I+ R AR NK++ +SD IR L A+G+ L D
Sbjct: 398 DDF---LQAGAEGRVDAAEVDAL--IQARLAARSNKDWAESDRIRDQLTAMGVVLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|226940330|ref|YP_002795404.1| Syc [Laribacter hongkongensis HLHK9]
gi|254781683|sp|C1D7F5.1|SYC_LARHH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226715257|gb|ACO74395.1| Syc [Laribacter hongkongensis HLHK9]
Length = 457
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/487 (46%), Positives = 296/487 (60%), Gaps = 32/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT+SR++E +P GKV MYVCG+T YD H+GHARV V FD++ R+LR GY++
Sbjct: 2 LHLYNTLSRQKERFQPIQPGKVNMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE L++R+ + +D L P+ EPR + +P +
Sbjct: 62 TYVRNITDIDDKIIRRAAENGEPINVLTQRFIDAMDEDAAALGVQKPNFEPRATQFVPDM 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +++ G AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF
Sbjct: 122 ISMIEELIGKGRAYAAPNGDVYYAVREFAGYGQLSGKSLDDLRAGERVDVDPNKRDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W SPWG GRPGWHIECSAM+ Y G FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWPSPWGQGRPGWHIECSAMNEHYFGPHFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + ++YW+HNGF+ +D+EKMSKSLGNFFTIR+V+E Y +R F++ HYRSP
Sbjct: 242 SEGAHDCKFVNYWMHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS LE A + +Y L + A LD A N + F A+M
Sbjct: 302 LNYSDAHLEDARSALSRLYTALKNVPAADVALDWEA-------------NDYARRFRAAM 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A +L G+ R LA KT+ VL +L +
Sbjct: 349 DDDFNTVEAVA-----------VLFELAGEANKSRSAELAGWLKTLGGVLGLLQRDPVDF 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ +L+ +++ D+V Q I R AR K++ +SD IR +L A GI L D
Sbjct: 398 ------LQGGSLE-GEISADEVEQLIAARKAARAGKDWAESDRIRDELIARGIVLEDGAG 450
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 451 GTTWRRA 457
>gi|342216509|ref|ZP_08709156.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341587399|gb|EGS30799.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 461
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/483 (43%), Positives = 294/483 (60%), Gaps = 27/483 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++RK+E +P + V MY CG T Y+ H+G+AR V FD L RY + G++V +
Sbjct: 3 LYNTLTRKKEEFEPLQDKHVRMYNCGPTVYNYIHVGNARPMVVFDSLRRYFIYKGWDVDF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLP-PSVEPRVSDHMPHII 196
V NFTD+DDKII +ANE G + ++ RY EEF +D L+ ++ PR +++M II
Sbjct: 63 VVNFTDIDDKIIKKANEEGLETKEIAERYIEEFKKDAQGLNLYEYKTINPRATEYMDEII 122
Query: 197 DMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
I ++D G AY +DGDVYF + K +YG+LSG+ L++ ++G R+ V+ +KKNP DFAL
Sbjct: 123 HFIKDLVDKGAAYELDGDVYFDITKAKDYGKLSGKNLDELQSGARIDVNEKKKNPGDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK KEGEP WESPW GRPGWHIECS M+ LG + DIH GG DL FPHHENEIAQS
Sbjct: 183 WKKKKEGEPAWESPWSQGRPGWHIECSVMAKTLLGKTIDIHTGGEDLEFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A +W+HNG +T+D EKMSKS GNFFT+R + + Y LRLFLI +HYRSPIN
Sbjct: 243 AHNGQDFARFWLHNGMITVDHEKMSKSKGNFFTVRDISKEYDLEVLRLFLISSHYRSPIN 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
+S ++ + +Y T E AL A K P+ I + +F +M D
Sbjct: 303 FSKEVMDQNKHALERLYNTKDRLEGALK-----AAKPGSDPNFDQDIQRLKEEFCQAMED 357
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D++T L+ L D K IN +G + + LESL +++ ++ VLGL+
Sbjct: 358 DMNTADALSKLFDLSKRIN------QGINEEIGLESLKGAQESYLSLAKVLGLL------ 405
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K D E++VL+ I++R ARKNK++ ++DA+R L +GIA+ DS GT
Sbjct: 406 ---------YKEEDQAEEEVLKLIKEREEARKNKDFARADALRDQLLEMGIAIEDSRDGT 456
Query: 557 TWR 559
W+
Sbjct: 457 KWK 459
>gi|297582426|ref|YP_003698206.1| cysteinyl-tRNA synthetase [Bacillus selenitireducens MLS10]
gi|297140883|gb|ADH97640.1| cysteinyl-tRNA synthetase [Bacillus selenitireducens MLS10]
Length = 467
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/486 (45%), Positives = 294/486 (60%), Gaps = 30/486 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++R++E +P EGKV MYVCG T Y+ HIG+AR V FD++ RYL + GY+V Y
Sbjct: 5 LYNTLTRQKETFQPIEEGKVKMYVCGPTVYNYIHIGNARPAVVFDMVRRYLEYRGYDVTY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDKII ANEL ED ++++ RY ++ D L + PRV++ M II
Sbjct: 65 VSNFTDVDDKIIKAANELDEDVMTVAERYIAAYYNDTEALGVRKADLHPRVTESMDDIIT 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
IT+++D G+AY GDVYF KF YGQLS + L+D +AG R+ V+ +K++P DF LW
Sbjct: 125 FITRLIDKGYAYESSGDVYFRTRKFDTYGQLSQQSLDDLQAGARIQVEEKKEDPLDFVLW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AKEGE W SPWG GRPGWHIECSAM +LG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KTAKEGEIAWSSPWGEGRPGWHIECSAMVKKHLGDTIDIHAGGQDLSFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+YWIHNG++ ID+EKMSKSL NF + ++ + P +R F++ HYRSPIN+
Sbjct: 245 LNEQRMANYWIHNGYINIDNEKMSKSLNNFILVHDIIRQFDPDVVRFFIVNAHYRSPINF 304
Query: 378 SVVQLESAS---ERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
S QLE+A ERI Y+ L L ++A L I K F+ASM
Sbjct: 305 SDEQLETAKTSLERIQTTYENL-----TYRLGESADLGGG-QDKWFALIRKEGERFIASM 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ +A + D ++ N L + K E L A K ++ VLG+
Sbjct: 359 DDDFNSANAVAVMFDLVRQANIYLTEKHTSK-----EVLEAFLKQFDDMAFVLGI----- 408
Query: 495 SEVLLQLREKALKR-ADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
A+KR A+L ++ V Q IE+R ARK++++ ++D IR L GI L D+P
Sbjct: 409 ----------AVKRQAELLDEDVEQLIEERIQARKDRDFARADEIRDSLKDQGIILEDTP 458
Query: 554 VGTTWR 559
GT W+
Sbjct: 459 QGTRWK 464
>gi|359434426|ref|ZP_09224691.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20652]
gi|357918934|dbj|GAA60940.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20652]
Length = 459
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/485 (45%), Positives = 291/485 (60%), Gaps = 30/485 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E KP VEGK+ MYVCG+T YD HIGHAR +V FDV+ RYLRH+GY++ Y
Sbjct: 4 IYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDLKY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L+ R + H+D L+ L P +EP V+ HM II
Sbjct: 64 VRNITDIDDKIIKRANENGESINDLTSRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEIIV 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
M+ ++++ G AY DGDV F V F +YG LS + L ++G RV V K +P DF L
Sbjct: 124 MVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK GEP W SPWG GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHENEIAQSC
Sbjct: 184 WKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQSC 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A N +++ WIH G V ++ EKMSKSL NFFT+R+V++ Y ++R FLI HYRS +N
Sbjct: 244 CANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDAESVRYFLISGHYRSQLN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L+ A + IY L D E P + N+F F +M D
Sbjct: 304 YSQENLDQARSSLERIYTALRDVE---------------PVECDLEGNEFVAKFRKAMDD 348
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T L L + K +N + T QA +L + +R++ VLG+ E
Sbjct: 349 DFNTPEALPVLFELAKELNRVKDTE--ADQAGKLAFI------LRSLGEVLGVAQQA-PE 399
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
LQ + + A + E +++R E +R +K + +D R L A+G+ L DS T
Sbjct: 400 AFLQGGQDDDEVA-IIEALIVKRNE----SRASKNWAAADEARDALNALGVILEDSAGKT 454
Query: 557 TWRPA 561
TWR A
Sbjct: 455 TWRKA 459
>gi|260768877|ref|ZP_05877811.1| cysteinyl-tRNA synthetase [Vibrio furnissii CIP 102972]
gi|375131397|ref|YP_004993497.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) [Vibrio
furnissii NCTC 11218]
gi|260616907|gb|EEX42092.1| cysteinyl-tRNA synthetase [Vibrio furnissii CIP 102972]
gi|315180571|gb|ADT87485.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) [Vibrio
furnissii NCTC 11218]
Length = 460
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/485 (44%), Positives = 298/485 (61%), Gaps = 29/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNSLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E E SL+ R +E + D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENQESCESLTERLIQEMYADFDALNIKRPDVEPRATAYIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++D GFAY D GDV F V+KF +YG+LS + L+ +AG RV +D K++P DF
Sbjct: 122 IELVQRLIDRGFAYVADNGDVMFEVNKFDDYGKLSKQDLDQLQAGARVDIDMAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLNHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L L ++P ++ F +M
Sbjct: 302 LNYSEENLNQARASLERLYTSLR------------GLDMTVP---AAGGEEYLTRFTTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L K A L AL + + +V+ +L Y
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRLKTEDTDKASA-----LGALMRELADVIGIL------Y 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L+ A ++ E + L ++ R +R +K++ +D R L +GI L D P
Sbjct: 396 QDPEAFLKGDAGNDDEVAEIEALIKL--RNDSRASKDWANADMARDKLNEMGIVLEDGPS 453
Query: 555 GTTWR 559
GTTWR
Sbjct: 454 GTTWR 458
>gi|417957999|ref|ZP_12600916.1| cysteine--tRNA ligase [Neisseria weaveri ATCC 51223]
gi|343967391|gb|EGV35636.1| cysteine--tRNA ligase [Neisseria weaveri ATCC 51223]
Length = 470
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/500 (44%), Positives = 293/500 (58%), Gaps = 49/500 (9%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY +
Sbjct: 2 LNIYNTLTRQKEEFIPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRAQGYPL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARA E GE L+ R+ ++D L + P VEP+ ++H+ +
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTERFIRAMNEDAAALGVIRPDVEPKATEHVQQM 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI +++DNG AY D GDVY++V +F YGQLSG+ L+D RAGERV VDS K++P DF
Sbjct: 122 LGMIQRLIDNGKAYAADNGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDSFKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGQGRPGWHIECSAMSEELFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAA----CNN---------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLA 361
SC A C + SH+ YW+HNGF+ +D+EKMSKSLGNFFTI +V+E Y
Sbjct: 242 SCGAHGGSCGHNRSGGKAIESHVKYWLHNGFIRVDNEKMSKSLGNFFTICEVLEKYDAEV 301
Query: 362 LRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVT 421
+R F++ HYRSP+NYS L+ A + +Y ALK++ P +
Sbjct: 302 VRFFILRAHYRSPLNYSDAHLDDAKGALTRLY---------------TALKNTPPAEFAV 346
Query: 422 S--INKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKT 479
S N + F ASM+DD T +A L + +N T L
Sbjct: 347 SENANDYTRRFFASMNDDFGTVEAMAVLFELANEVNKTNSTE--------------LAGC 392
Query: 480 IRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIR 539
++ + V+GL+ E L + L+ +++ I R AR K + +SD IR
Sbjct: 393 LKALGGVIGLLQRDPLEFL----QGGSVSDGLSNEEIESLIAQRKQARAEKNWAESDRIR 448
Query: 540 KDLAAVGIALMDSPVGTTWR 559
L A I L D GTTWR
Sbjct: 449 DLLNAENIILEDGAGGTTWR 468
>gi|359449072|ref|ZP_09238573.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20480]
gi|358045104|dbj|GAA74822.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20480]
Length = 459
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/485 (46%), Positives = 291/485 (60%), Gaps = 30/485 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E KP V+GK+ MYVCG+T YD HIGHAR +V FDV+ RYLRH+GY + Y
Sbjct: 4 IYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYNLKY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TDVDDKII RANE E L+ R + H+D L+ L P VEP V+ HM II+
Sbjct: 64 VRNITDVDDKIIKRANENKESINDLTLRMTKAMHEDFDSLNMLRPDVEPTVTGHMGEIIE 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
M+ +++ G AY DGDV F V F +YG LS + L ++G RV V K +P DF L
Sbjct: 124 MVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGARVEVAQDKDDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK GEP W SPWG GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHENEIAQSC
Sbjct: 184 WKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQSC 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A N +++ WIH G V ++ EKMSKSL NFFT+R V++ Y P ++R FLI HYRS +N
Sbjct: 244 CANNGEYVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVLKEYDPESVRYFLISGHYRSQLN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L+ A + IY AL+D P + N+F F +M D
Sbjct: 304 YSQENLDQARSSLERIY---------------TALRDVKPIECELESNEFVIKFRKAMDD 348
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T L L + K +N R + A++ LA + +TI VL V + E
Sbjct: 349 DFNTPEALPVLFELAKELN-----RVKESDAIQAGQLAFILRTIGEVLGV----AQQAPE 399
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
LQ + + A + E +++R E AR +K++ +D R L A+G+ L DS T
Sbjct: 400 AFLQGGQDDNEVATI-EALIVKRNE----ARASKDWAAADEARDALNALGVILEDSAGKT 454
Query: 557 TWRPA 561
TWR A
Sbjct: 455 TWRKA 459
>gi|258626834|ref|ZP_05721641.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM603]
gi|258580881|gb|EEW05823.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM603]
Length = 459
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 298/485 (61%), Gaps = 30/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP V GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E E SL+ R +E + D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY D GDV F V K+ EYG+LS + LE +AG RV V++ K++P DF
Sbjct: 122 IALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEAAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L L +P ++ + F A+M
Sbjct: 302 LNYSEENLNQARASLERLYNALR------------GLDRRVP---AAGGEEYLSRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L ++ L + +AL +R + V+G++ Y
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KSEDLTNASALGSLMRELADVIGIL---Y 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E + A D +Q+ I+ R +R K++ +D R L +GI L D P
Sbjct: 396 QEPETFFQGSA---EDEEAEQIEALIKLRNDSRAVKDWANADMARDKLNEMGIVLEDCPN 452
Query: 555 GTTWR 559
GTTWR
Sbjct: 453 GTTWR 457
>gi|381160970|ref|ZP_09870202.1| cysteinyl-tRNA synthetase [Thiorhodovibrio sp. 970]
gi|380879034|gb|EIC21126.1| cysteinyl-tRNA synthetase [Thiorhodovibrio sp. 970]
Length = 466
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/486 (45%), Positives = 290/486 (59%), Gaps = 25/486 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R +E P G+ MYVCG+T YDL H+GHARV V FD++YRYL+ GY V
Sbjct: 2 LHIYNSLTRHKEPFVPIEPGRARMYVCGMTVYDLCHLGHARVLVVFDMVYRYLQQAGYAV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARA E G L+ R+ H+D L PP++EPR + H+ I
Sbjct: 62 TYVRNITDIDDKIIARAAEQGIPIDQLTERFIAAMHEDAARLGVRPPTLEPRATAHIDEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ ++++ AY D GDVY+ V F YG+LSG+ D RAG RV VD K++P DF
Sbjct: 122 LAMVQRLIEREHAYVADKGDVYYQVSSFSGYGRLSGKDPGDLRAGARVDVDQHKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWGPGRPGWHIECSAMS LG+ FDIHGGG DL FPHH+NEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGPGRPGWHIECSAMSTQCLGNHFDIHGGGADLQFPHHDNEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A ++ W+HNGFV I+ EKMSKSLGNFFT+R+++ Y P +R F++ +HYRSP
Sbjct: 242 SEGATGEPFVNIWMHNGFVRINDEKMSKSLGNFFTVREILTRYRPEEIRYFILASHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY LE A + +Y L + L + AA D + F +M
Sbjct: 302 LNYDESNLEQARSALTRLYTAL----RGLPAAEPAAEPD--------GGDAHRQRFTDAM 349
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA L D + IN L + L AAL +R++ VLGL+
Sbjct: 350 DDDFNTPEALAVLFDLAREINRLRDS--------DLSRAAALGAELRSLGAVLGLVQDQA 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ LR A + + D ++ I+ R AR++K++ ++D IR L GI L D
Sbjct: 402 DDF---LRGGADAQPEGPSDAEIENLIQRRVQARQDKDFAEADRIRDQLQQAGILLEDGA 458
Query: 554 VGTTWR 559
GT WR
Sbjct: 459 GGTRWR 464
>gi|333376196|ref|ZP_08467988.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
gi|332968931|gb|EGK07978.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
Length = 469
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/496 (43%), Positives = 291/496 (58%), Gaps = 44/496 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E +P V MYVCG+T YD H+GHARV V FD++ R+LR GY +
Sbjct: 2 LQIYNTLTRQKEKFEPLDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE G L+ + ++D L L P VEP+ ++H+P +
Sbjct: 62 TYVRNITDIDDKIIKRANERGITIQELTEEFITAMNEDSDKLGVLRPDVEPKATEHIPQM 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD+ K++P DF
Sbjct: 122 IQMIEDLIANGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVDVDTNKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK EP W SPWG GRPGWHIECSAM G +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPEEPHWNSPWGKGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAA----CNN--------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLAL 362
SC A CN+ SH+ YW+HNGF+ +D+EKMSKSLGNFFTIR V++ Y P +
Sbjct: 242 SCGAHNSSCNHNHGDKIIQSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYQPEVV 301
Query: 363 RLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTS 422
R F++ HYRSP+NYS L+ A + +Y TL++ A L +
Sbjct: 302 RFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLNNVAPAAFEL-------------TEN 348
Query: 423 INKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRN 482
N++ F A+M+DD T ++ L + N + A ++
Sbjct: 349 TNEYTRKFFAAMNDDFGTAEAMSVLFELANEANK--------------HNSAEFAGCLKA 394
Query: 483 VLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDL 542
+ +LGL+ L + L+ D++ + I R AR+ K + +SD IR L
Sbjct: 395 LGGMLGLLQEEPQAFL----QSGASDDGLSADEINELIAQRKTARETKNWAESDRIRDVL 450
Query: 543 AAVGIALMDSPVGTTW 558
AA I + DS GTTW
Sbjct: 451 AAHKIIVKDSADGTTW 466
>gi|421521487|ref|ZP_15968142.1| cysteinyl-tRNA ligase [Pseudomonas putida LS46]
gi|402754813|gb|EJX15292.1| cysteinyl-tRNA ligase [Pseudomonas putida LS46]
Length = 460
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/487 (45%), Positives = 286/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R + H+D L+ LPP EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWGPGRPGWHIECS MS LG SFDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVASHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P F F +M
Sbjct: 302 INYSEDSLRDAKGALERFYHALR----------------GLPRVAAKGGEAFVERFSVAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L D ++ IN L + +E+ A L +R + VLG++
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDS--------DVEAAAGLAGRLRELGDVLGVLQLEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LR A + D E + L I+ R AR +K + +SD IR +L A+G+ L DS
Sbjct: 398 DDF---LRAGAEGKVDAAEVEGL--IQARLQARADKNWAESDRIRDELTAMGVVLEDSKG 452
Query: 555 GTTWRPA 561
TTWR A
Sbjct: 453 TTTWRLA 459
>gi|384084823|ref|ZP_09995998.1| cysteinyl-tRNA synthetase [Acidithiobacillus thiooxidans ATCC
19377]
Length = 466
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/486 (44%), Positives = 294/486 (60%), Gaps = 37/486 (7%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LY+T+ R + +++P G+VG+YVCG+T YD H+GHARV VTFD + RYLR G +V Y
Sbjct: 10 LYDTLQRDKTILEPATPGQVGIYVCGMTVYDYCHLGHARVMVTFDTVVRYLRARGMKVTY 69
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RA E GE +L+ R+ E H D L C P +EPR ++H+ + +
Sbjct: 70 VRNITDIDDKIIRRALEQGESIQALTARFIEAMHADEAALLCQKPDLEPRATEHVGAMQN 129
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++++ G AY +GDVY++V FP+YG+LSG+ +++ +G RV + K++P DFAL
Sbjct: 130 MIAELIERGHAYAAANGDVYYAVRSFPDYGKLSGKSIDELNSGARVELGEDKRDPLDFAL 189
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS- 315
WK+AK EP W SPWG GRPGWHIECSAMSA LG +FDIHGGG DL FPHHENEIAQS
Sbjct: 190 WKAAKPDEPSWSSPWGEGRPGWHIECSAMSADALGCTFDIHGGGADLQFPHHENEIAQSQ 249
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A C +H YW+HNGFV I+ EKMSKSL NF T+R+++ L+ LR F++ + YRSP+
Sbjct: 250 GAGCAFAH--YWMHNGFVRINDEKMSKSLNNFLTVRELLPLFSGEVLRFFILSSQYRSPL 307
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
+YS LE A + +Y L + +P +FHN +MS
Sbjct: 308 HYSEEGLEQARAGLTRLYTALR----------GMPARQIVPELGSEWRERFHN----AMS 353
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD HT LA L D + +N L + E A L +R + +LG
Sbjct: 354 DDFHTPAALATLFDLAREVNRLRDEQS--------EVAAPLATLLRELAAMLG------- 398
Query: 496 EVLLQLREKALKRADLTEDQ--VLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+LQ ++ R D + +RI R AR+ K++ +DAIR +LAA GI L D P
Sbjct: 399 --ILQEDPESYFRGSNESDNAWIEERIAARLAARQKKDFAGADAIRAELAAAGIILEDGP 456
Query: 554 VGTTWR 559
GT+WR
Sbjct: 457 AGTSWR 462
>gi|226328546|ref|ZP_03804064.1| hypothetical protein PROPEN_02441 [Proteus penneri ATCC 35198]
gi|225203279|gb|EEG85633.1| cysteine--tRNA ligase [Proteus penneri ATCC 35198]
Length = 463
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 293/485 (60%), Gaps = 27/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP GK+GMYVCG+T YDL HIGH R +V FD + RYLR+LGY+V
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAITRYLRYLGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P EPR + H+ I
Sbjct: 62 NYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNIARPDSEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ ++ G AY D GDV F++D P+YG LS + LE +AG RV V + K+NP DF
Sbjct: 122 IELTEALIKLGHAYVADNGDVMFAIDTDPDYGLLSRQDLEQLQAGARVEVANVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM++ LGH FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGKGRPGWHIECSAMNSKELGHHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + +Y +L ++ + A F F+ +M
Sbjct: 302 LNYTEENLKQARTALERLYTSLRGTDENAQPVGGEA---------------FEAQFIDAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L +A+ + + L +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDLAREVNRL--------KAVDMNAANGLAAVLRKLAKVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ KA +++ + ++L I+ R ARKNK++ +D R L A+GI L D P
Sbjct: 398 PEHFLQSGAKADDASEVEKIELL--IQQRNDARKNKDWAAADVARDALTAMGIVLEDGPQ 455
Query: 555 GTTWR 559
GT WR
Sbjct: 456 GTVWR 460
>gi|387894410|ref|YP_006324707.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens A506]
gi|387159469|gb|AFJ54668.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens A506]
Length = 460
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/487 (45%), Positives = 286/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD HIGH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPAVAPAGGEAFVARFTEVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L + ++ IN L T +++ A L ++ + +VLG++
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRET--------DIDAAAGLAARLKELASVLGVLQMEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L+ A R D E L I+ R AR NK++ +SD IR L A+G+ L D
Sbjct: 398 DDF---LQAGAEGRVDAAEVDAL--IQARLAARSNKDWAESDRIRDQLTAMGVVLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|365873642|ref|ZP_09413175.1| cysteinyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
gi|363983729|gb|EHM09936.1| cysteinyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
Length = 467
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/482 (43%), Positives = 304/482 (63%), Gaps = 22/482 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
++N ++ K+E P EGKV YVCG T YD HIG+AR ++ FDV+ RYL +LGY+V Y
Sbjct: 5 IFNDLTNKKEPFVPVEEGKVRFYVCGPTVYDYFHIGNARPFIVFDVMRRYLEYLGYQVKY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDK+I RANE+G L+ ++ E ++QD L +V P+ ++ +PHII+
Sbjct: 65 VQNFTDIDDKMINRANEMGITVKELADKFIEAYYQDADALGIKRATVNPKATEEIPHIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I ++ G AY+VDGDVYF V +P YG+L + LE+ +AG R+ VD RK++P DFALW
Sbjct: 125 LIEILIRKGHAYQVDGDVYFDVKSYPAYGKLIRQDLEELQAGARIDVDPRKRHPLDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ K GEP WESPWG GRPGWHIECSAM +LG + DIHGGG DLVFPHHENEIAQS A
Sbjct: 185 KAQKPGEPAWESPWGLGRPGWHIECSAMCRHHLGETIDIHGGGCDLVFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A + YW+HNG++ ID EKMSKSLGNF T R V+ +HPLA+RLF++ HYRSPIN+
Sbjct: 245 ATGKPFVRYWVHNGYLMIDKEKMSKSLGNFMTARDVISKFHPLAVRLFMLSAHYRSPINF 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L A + + + AL D+ + + + +++ + FL +M DD
Sbjct: 305 SEDNLRQAQGALERLRNGWAEISFALKRQDSGGISEELR----SAVRESREQFLNAMDDD 360
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
L+T + A+ +++ N + G + + LE+L + +++V ++G++
Sbjct: 361 LNTAEAIGAVFALIRSANSHI----GSQSPLDLEALNEAARFLQDVDRIMGII------- 409
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
++ A + ++ + I R ARK + ++++DAIR L ++GI L D+P GT
Sbjct: 410 -------GIENAQALDHEIEELIHRRNQARKERNFKEADAIRDKLLSMGIVLEDTPQGTR 462
Query: 558 WR 559
W+
Sbjct: 463 WK 464
>gi|251793189|ref|YP_003007917.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
gi|247534584|gb|ACS97830.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
Length = 459
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/489 (45%), Positives = 292/489 (59%), Gaps = 38/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NT++R++E+ KP GK+GMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY++
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 TAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H+G + +D EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 242 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +K+ D+ F +M
Sbjct: 302 LNYSEENLNLAHGALERLYTALRGTDKSAVAFGGENFVDA---------------FREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAM-RLESLAALEKTIRNVLTVLGLMSTG 493
DD +T L+ L + + +N L K Q M + LAA +R + +LG
Sbjct: 347 DDDFNTPNALSVLFEIARELNKL------KTQDMAKANGLAA---RLRELAAILG----- 392
Query: 494 YSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
LLQL + +A ED+V + I+ R AR K++ +DA R L +GI L
Sbjct: 393 ----LLQLDPEQFLQASSDEDEVAKIEALIKQRNEARVAKDWPAADAARNALTQMGIVLE 448
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 449 DGPNGTTWR 457
>gi|212703175|ref|ZP_03311303.1| hypothetical protein DESPIG_01217 [Desulfovibrio piger ATCC 29098]
gi|212673441|gb|EEB33924.1| cysteine--tRNA ligase [Desulfovibrio piger ATCC 29098]
Length = 483
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/484 (44%), Positives = 305/484 (63%), Gaps = 9/484 (1%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++RK+E P GKV MYVCG+T YD HIGHAR + FDVL R+LR LG +V +
Sbjct: 3 LYNTLTRKKEEFVPVRPGKVNMYVCGITAYDYCHIGHARSALVFDVLVRHLRALGLDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTDVDDKII RANE D + + Y + FH+DM L+ + EPR ++++ + D
Sbjct: 63 VRNFTDVDDKIIRRANEEKRDWREVGQTYIDAFHEDMDRLNVVRADHEPRATEYIQQMQD 122
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ ++++ G AY V GDVYF V +P YG+LSGR L++ +AG RVA K++P DFAL
Sbjct: 123 LCSELIAQGKAYAVPSGDVYFRVRAYPPYGKLSGRSLDELQAGARVAPGEEKQDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEPFWESPWG GRPGWHIECSAMS YL DIHGGG DL+FPHHENEIAQ+
Sbjct: 183 WKAAKPGEPFWESPWGKGRPGWHIECSAMSKEYL--PLDIHGGGQDLIFPHHENEIAQTE 240
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AAC+ +W+HNGFV +++EKMSKSLGNF TIR ++ Y P LR FL+G HYRSPI+
Sbjct: 241 AACSCQLARFWVHNGFVQVNAEKMSKSLGNFKTIRDILASYLPETLRFFLLGKHYRSPID 300
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
++ ++ + + + IY+ + KAL A K +P D + ++ F A++ D
Sbjct: 301 FTADIMDESEKALQRIYECQLEAGKALER--AKWKKVDLPADILKEWDEHGQGFNAALDD 358
Query: 437 DLHTTVVLAALSDPLKTINDLLHTR--KGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
D++T L + ++ +N +L + + + A RL L + + LGL
Sbjct: 359 DVNTAQALGHIFSQVRLVNRVLEDKALRAGEGARRL--LEEFFERHNDWSAQLGLFGQDP 416
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LL LR++ R ++ +V +++R AR K++ +SD +R LA +G+A+ D+
Sbjct: 417 ATFLLALRDQRAARLNIDVPRVQTLLDERAAARAAKDFARSDELRAALAELGVAVRDTVE 476
Query: 555 GTTW 558
G W
Sbjct: 477 GQVW 480
>gi|254373761|ref|ZP_04989244.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3548]
gi|290954116|ref|ZP_06558737.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
URFT1]
gi|422939228|ref|YP_007012375.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC200]
gi|151571482|gb|EDN37136.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3548]
gi|407294379|gb|AFT93285.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC200]
Length = 459
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 287/485 (59%), Gaps = 29/485 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
YN++S ++E KP K+ MY CGVT YD HIGHAR Y+ FDV+ RY ++ GY+V
Sbjct: 3 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTL 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L R + H L+ L PS EPR ++ +P ++
Sbjct: 63 VRNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVA 122
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ G+AY+ +GDV++ V KF +YG+LS + LE + G RV V K+NP DF L
Sbjct: 123 MIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKENPMDFVL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AKEGEP W+SPWG GRPGWHIECSAMS LG +FDIH GG DL FPHHENEIAQS
Sbjct: 183 WKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +YW+H+G V +++EKMSKSL NFFTI +V+E YHP +R FL T YRS IN
Sbjct: 243 ACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFLASTVYRSEIN 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS LE+A + ++ L D E ++ ++P D +++ F+ +M +
Sbjct: 303 YSKENLENAKASVERLFNALRDIE---------PIEVNLPDDA----SEYEEKFIKAMDN 349
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L K IN L T K K +R + VLG++ T E
Sbjct: 350 DFNTPEALAVLFSLAKEINTLKTTNKYKASGYAY--------LLRKLCDVLGILFTDIEE 401
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K AD +E + L I +RT A+K+K Y ++D IR L GI L DS GT
Sbjct: 402 YF-----KQGDGADASEIEKL--IAERTQAKKDKNYARADEIRNQLQQQGIILEDSATGT 454
Query: 557 TWRPA 561
TW+
Sbjct: 455 TWKKG 459
>gi|381401996|ref|ZP_09926885.1| cysteinyl-tRNA synthetase [Kingella kingae PYKK081]
gi|380833122|gb|EIC13001.1| cysteinyl-tRNA synthetase [Kingella kingae PYKK081]
Length = 469
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/496 (43%), Positives = 290/496 (58%), Gaps = 44/496 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E +P V MYVCG+T YD H+GHARV V FD++ R+LR GY +
Sbjct: 2 LQIYNTLTRQKEKFEPLDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE G L+ + ++D L L P VEP+ ++H+P +
Sbjct: 62 TYVRNITDIDDKIIKRANERGITIQELTEEFITAMNEDSDKLGVLRPDVEPKATEHIPQM 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD+ K++P DF
Sbjct: 122 IQMIEDLIANGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVDVDTNKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK EP W SPWG GRPGWHIECSAM G +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPEEPHWNSPWGKGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAA----CNN--------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLAL 362
SC A CN+ SH+ YW+HNGF+ +D+EKMSKSLGNFFTIR V++ Y P +
Sbjct: 242 SCGAHNSSCNHNHGDKIIQSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYQPEVV 301
Query: 363 RLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTS 422
R F++ HYRSP+NYS L+ A + +Y TL++ A L +
Sbjct: 302 RFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLNNVAPAAFEL-------------TEN 348
Query: 423 INKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRN 482
N++ F A+M+DD T ++ L + N + A ++
Sbjct: 349 TNEYTRKFFAAMNDDFGTAEAMSVLFELANEANK--------------HNSAEFAGCLKA 394
Query: 483 VLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDL 542
+ VLGL+ L + L+ D++ + I R AR+ K + +SD IR L
Sbjct: 395 LGGVLGLLQEEPQAFL----QSGASDDGLSADEINELIAQRKTARETKNWAESDRIRDVL 450
Query: 543 AAVGIALMDSPVGTTW 558
AA I + D GTTW
Sbjct: 451 AAHKIIVKDGADGTTW 466
>gi|134296083|ref|YP_001119818.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
gi|166200137|sp|A4JFD0.1|SYC_BURVG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|134139240|gb|ABO54983.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
Length = 465
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/489 (45%), Positives = 299/489 (61%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R +++ P+ G+V MYVCG+T YD H+GHAR+ V FD++ R+LR +GY V
Sbjct: 4 LRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYRV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE SL+ R+ H D L P +EPR + +P +
Sbjct: 64 TYVRNITDVDDKIIRRAVENGESIKSLTDRFIGAMHDDEAALGIQRPDIEPRATQFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI Q+ NG+AY+ DGDV +SV KF YG+LSG+ L+D RAGERVA + K++P DF
Sbjct: 124 LGMIEQLEANGYAYQASDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLDF 183
Query: 255 ALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AK +P W S +G GRPGWHIECSAM LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKRAKAEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGFV +D+EKMSKSLGNFFTIR+V+E Y +R F++ THY
Sbjct: 244 IAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRFFIVRTHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RSP+NYS V L+ A + +Y L D E DA AL + P + F
Sbjct: 304 RSPLNYSDVHLDDARASLTRLYTALKDVEP-----DALALDWNEP---------YAQRFA 349
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A+M+DD++T V +A L + +N TR A+L + ++ + +LGL+
Sbjct: 350 AAMNDDINTPVAVATLFELAGEVN---RTRD-----------ASLARQLKQLAGLLGLLG 395
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LQ + L D++ RI R A++ K+Y ++D IR +L GIAL D
Sbjct: 396 R-EPRAFLQQGAGSAHAGALAADEIEARIAARVAAKQAKDYAEADRIRAELLEAGIALED 454
Query: 552 SPVGTT-WR 559
P G+T WR
Sbjct: 455 KPGGSTEWR 463
>gi|427403812|ref|ZP_18894694.1| cysteinyl-tRNA synthetase [Massilia timonae CCUG 45783]
gi|425717481|gb|EKU80439.1| cysteinyl-tRNA synthetase [Massilia timonae CCUG 45783]
Length = 464
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/493 (46%), Positives = 306/493 (62%), Gaps = 35/493 (7%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
+QL +YNT++R +++ PKV GKVGMYVCG+T YD H+GHAR+ + FDV+YR+L GY
Sbjct: 2 SQLKIYNTLARDKQVFVPKVAGKVGMYVCGMTVYDYCHVGHARMMMAFDVVYRWLMASGY 61
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
EV YVRN TD+DDKII RA E GE +L++R+ + +D L LPP+V PR ++++P
Sbjct: 62 EVNYVRNITDIDDKIIRRAVENGETIGALTKRFEKYMDEDTDALGILPPTVVPRATEYVP 121
Query: 194 HIIDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
H++ +I ++ G AY+ DGDV ++V F YG+LSG+ L+D RAGERV V + K++P
Sbjct: 122 HMLSIIEKLEQKGLAYQTEDGDVNYAVRGFDGYGKLSGKSLDDLRAGERVDVKTAKRDPL 181
Query: 253 DFALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHE 309
DF LWK+AKE EP W+S WG GRPGWHIECSAMS A LG FDIHGGG DL FPHHE
Sbjct: 182 DFVLWKAAKESEPLEAKWDSQWGRGRPGWHIECSAMSCATLGEHFDIHGGGADLQFPHHE 241
Query: 310 NEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGT 369
NEIAQS A ++YWIHNGFV +D+EKMSKSLGNFFTIR+V+ Y +R F++
Sbjct: 242 NEIAQSEGAFGGPMVNYWIHNGFVRVDNEKMSKSLGNFFTIREVLAKYDAEVVRFFILRA 301
Query: 370 HYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-N 428
HYRSP+NYS V ++ A + +Y L D + L D + ++ H
Sbjct: 302 HYRSPLNYSDVHIDDARGALTRLYTALADVD----------LGDG---ELAVDWDEAHAK 348
Query: 429 DFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLG 488
F +M DD +T + +A L D +N K + A +L++LAA VLG
Sbjct: 349 RFRDAMDDDFNTPLAVAELFDLASEVN----RGKSVETARQLKALAA----------VLG 394
Query: 489 LMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIA 548
L+ + LQ L E +L I R A+ +++ ++DAIRK+L A GI
Sbjct: 395 LLERA-PQAFLQAGTPG--SGGLDEAAILDAIARRAAAKAARDFAQADAIRKELTAAGIV 451
Query: 549 LMDSPVGTTWRPA 561
L D GTTWR A
Sbjct: 452 LEDKADGTTWRRA 464
>gi|297537709|ref|YP_003673478.1| cysteinyl-tRNA synthetase [Methylotenera versatilis 301]
gi|297257056|gb|ADI28901.1| cysteinyl-tRNA synthetase [Methylotenera versatilis 301]
Length = 469
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/501 (45%), Positives = 311/501 (62%), Gaps = 48/501 (9%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R+++ P V GKV MYVCG+T YD H+GHARV V FD++ R+LR GY V
Sbjct: 2 LKIYNTLAREKQTFTPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVSRWLRSSGYAV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE L++R+ E +D L + P +EP+ ++ + +
Sbjct: 62 TYVRNITDIDDKIIKRANENGETIGQLTQRFIEAMDEDSAKLGIIRPDIEPKATEFIDGM 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI+ +++ GFAY +GDV++SV+ F YG+LSG+ LED RAGERV VD+ KK+P DF
Sbjct: 122 IQMISALIEKGFAYVAANGDVFYSVNNFEGYGKLSGKSLEDLRAGERVEVDTHKKDPMDF 181
Query: 255 ALWKSAKEGEPFWESPW-----GPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHE 309
LWKS K EP W+SP+ G GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHE
Sbjct: 182 VLWKSVKPNEPSWDSPFGGPNGGKGRPGWHIECSAMSSHHLGEHFDIHGGGQDLQFPHHE 241
Query: 310 NEIAQSCAACNNSH-----ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRL 364
NEIAQS AA +++ ++YW+HNGFV +D EKMSKSLGNFFTIR V+E Y +R
Sbjct: 242 NEIAQSEAAHSHNGEPCQMVNYWMHNGFVRVDDEKMSKSLGNFFTIRTVLEKYDAEVVRF 301
Query: 365 FLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSIN 424
F++ HYRSP+NYS Q L D + AL+ L +L+ + D
Sbjct: 302 FILRAHYRSPLNYS--------------DQHLDDAKLALTRL-YTSLRGHVVADVAIDWQ 346
Query: 425 KFHN-DFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNV 483
+ H+ F +M DD +T +A L D +N K +++ +AAL K++ V
Sbjct: 347 QPHSARFKEAMDDDFNTPEAMAVLFDLANEVN--------KTKSLE---VAALLKSLAGV 395
Query: 484 LTVLGLMSTGY--SEVLLQLREKALKRADLTEDQ-VLQRIEDRTVARKNKEYEKSDAIRK 540
L +L + + +V QL LK + DQ V+QR E A+K K + ++D IRK
Sbjct: 396 LGLLQRDADAFLQGDVAAQLAGTELK---IDIDQLVIQRNE----AKKTKNFAEADRIRK 448
Query: 541 DLAAVGIALMDSPVGTTWRPA 561
+LA GI L D+ +GTTWR
Sbjct: 449 ELADAGIVLEDTALGTTWRKG 469
>gi|406040789|ref|ZP_11048144.1| cysteinyl-tRNA ligase [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 473
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/488 (45%), Positives = 306/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+V+G++ +YVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRVDGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII+RANE GE L+ R+ ++D L C P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIISRANENGETIQQLTARFITAMNEDAASLGCAEPDESPKATEYIDQMQN 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++NG AY +GDVY+ V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGTLVENGTAYPSSNGDVYYEVTKFAKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK EP W+SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKANEPSWQSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S L+ A + Y E+ + + L ++F F ++M
Sbjct: 306 VNFSDTALKEAKTALTRFYHAFKAYEQTYGQIHSDQLD-----------HEFIERFNSAM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L D + +N R K+Q E A T+R++ T+LGL+
Sbjct: 355 RDDFNTPEAMAVLFDLNRELN-----RAVKEQCA--EQAALYYATLRHLTTILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L + ++AL L +D++ I+ R A+K K++ K+D IR+ L G+AL D+
Sbjct: 408 DEFLKSDIGQQALS---LNDDEIEALIQQRHDAKKAKDFAKADGIRQSLLEKGVALEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|225848506|ref|YP_002728669.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644318|gb|ACN99368.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 487
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/487 (42%), Positives = 293/487 (60%), Gaps = 7/487 (1%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++ K+E P +V +Y CGVT YD +H+GH R + FD++ RYLR+LGY V
Sbjct: 3 LKIYNTLTGKKEDFAPIKPPQVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYLRYLGYNV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRNFTDVDDKII RA +S +Y +E+ D P +EPRV+ H+P I
Sbjct: 63 IFVRNFTDVDDKIINRAKNECVPFTVISDKYIKEYFDDAEKFRIEPADIEPRVTTHIPDI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I I +++D G+AY VDGDVYFSV KF +YG+LS R +++ AG R+ +KK+P DFA
Sbjct: 123 IKFIQELIDKGYAYEVDGDVYFSVRKFKDYGKLSKRSIDELLAGARIEPGEKKKDPLDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWKSAK GEP+WESPWG GRPGWH EC AM +LG + DIHGGG+DL FPHHENEIAQ+
Sbjct: 183 LWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPHHENEIAQA 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
+ YWIHNG VT++ +KMSKSLGN+ T++++ Y P LRL ++ HYRSP+
Sbjct: 243 ESLTGKPFARYWIHNGLVTVNGQKMSKSLGNYVTLKEIYSKYEPDILRLLVLSVHYRSPL 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
++S ++E + Y+ L + + +L ++ D T I K + F ++MS
Sbjct: 303 DFSWDKMEETKK----AYERLKNAIQEYEILQKLPTDENFEEDLYTEIQKAQSGFYSAMS 358
Query: 436 DDLHTTVVLAALSDPLKTINDLLH--TRKGKKQAMRLESLAALEKTIRNVL-TVLGLMST 492
DD +T LA+L ++ +N L ++G L+S T+ N+ + GL +
Sbjct: 359 DDFNTPEALASLFGLVRQMNILKDKAIKQGGISKKALQSYKEAADTLHNICRDIFGLFDS 418
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
V + + + L ED + IE R ARK K++ +D IR LA GI + D+
Sbjct: 419 LQPCVKTEEIKVEKQEEKLDEDLINILIEVRDKARKEKQFSIADTIRDKLAEKGIVIEDT 478
Query: 553 PVGTTWR 559
P GT W+
Sbjct: 479 PFGTKWK 485
>gi|425744739|ref|ZP_18862794.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-323]
gi|425490335|gb|EKU56635.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-323]
Length = 473
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/488 (44%), Positives = 303/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG++ MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKIIARANE GE L+ R+ + ++D +L C P P+ ++++ +
Sbjct: 66 IRNITDIDDKIIARANENGESIQQLTARFIDAMNEDAANLGCAAPDEAPKATEYIDQMQS 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI ++D G AY +GDVYF V KF +YG+LSGRKLED +AG ERV V+ KK+P DF
Sbjct: 126 MINTLVDKGAAYPSSNGDVYFEVSKFDKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L+ + + +F+N +M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFKAYQQVYGQKTIETLEQNF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + E AL T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQA-------EQATALYSTLRHLTHILGLVQHDV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L + ++AL +D + +Q+ R A+K K++ K+D IR+ L G+ L D+
Sbjct: 408 DEFLKSDIGQEALSLSDADIEDFIQQ---RVDAKKAKDFAKADGIRQSLLDQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTIWRRA 472
>gi|410630804|ref|ZP_11341491.1| cysteinyl-tRNA synthetase [Glaciecola arctica BSs20135]
gi|410149770|dbj|GAC18358.1| cysteinyl-tRNA synthetase [Glaciecola arctica BSs20135]
Length = 459
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/489 (43%), Positives = 294/489 (60%), Gaps = 38/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVG+YVCG+T YD+ H+GHAR Y++FD++ RY+R G EV
Sbjct: 2 LHIYNTLTRQKEQFKPLQAGKVGLYVCGITVYDVCHVGHARTYLSFDLMVRYMRSRGLEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII+RANE G P + + H+D + L P VEPRV+ HMP I
Sbjct: 62 KYVRNITDVDDKIISRANEQGLTPEQFTEKTIGRMHEDFAAIGLLEPDVEPRVTTHMPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++I +++D G+AY+ GDV F V+ + EYG+L + LE +G RV V K++P DF
Sbjct: 122 INVIQRLIDKGYAYQAPSGDVLFEVNTYAEYGKLGRQDLEQLNSGARVEVVDEKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWKS K GEPFWESPWG GRPGWHIECSAM+ +LG FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKSVKPGEPFWESPWGNGRPGWHIECSAMNHKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V ++ EKMSKSLGNFFT+R V+++Y +R FL+ YRS
Sbjct: 242 SCCAFDTPYVNYWVHTGMVQVNQEKMSKSLGNFFTLRDVLDVYDAETVRYFLMSAQYRSQ 301
Query: 375 INYS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV-TSINKFHNDF 430
++YS + Q S ER++ +L+D P V ++ + F
Sbjct: 302 LSYSDSFIQQARSGLERLY------------------TSLRDVTPNMNVDIAMGDYQTRF 343
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
+M DD +T A L D K IN + +QA A L + + +LG++
Sbjct: 344 NHAMDDDFNTPEAFAVLFDLAKEIN-----KSTGQQA------ADLAGVMIKLADILGIL 392
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
+E L + A Q+ I+ R AR +K++ +D+ R L A+ I L
Sbjct: 393 QQAPNEFL----QSAAGGEQDDVAQIEGLIKARNDARASKDWAAADSARDALNALNIVLE 448
Query: 551 DSPVGTTWR 559
D+ GTTWR
Sbjct: 449 DNENGTTWR 457
>gi|410690165|ref|YP_006963884.1| Cysteinyl-tRNA synthetase [Salmonella sp. 40]
gi|389597466|gb|AFK90217.1| Cysteinyl-tRNA synthetase [Salmonella sp. 40]
Length = 463
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/487 (44%), Positives = 294/487 (60%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT +R++E KP G+VGMYVCG+T YDL HIGH R +V+FDV+ RYLR LGY++
Sbjct: 2 LKIYNTYTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMITEMHKDFDALNILRPELEPRATHHISEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVD--SRKKNPA 252
I++ ++ G AY + GDV FSV P+YG+LS + LE ++G+RV D K+N
Sbjct: 122 INITETLIRRGHAYIAENGDVMFSVSTDPDYGKLSRQDLEQLQSGDRVRTDVVDVKRNSM 181
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DF LWK +KEGEP W SPWG GRPGWHIECSAM+ +LGH FDIHGGG DL+FPHHENEI
Sbjct: 182 DFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKHLGHHFDIHGGGSDLMFPHHENEI 241
Query: 313 AQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
AQS A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYR
Sbjct: 242 AQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYR 301
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
S +NYS L+ A + +Y +L +K+++ A F F+
Sbjct: 302 SQLNYSEENLKQARSALERLYTSLRGTDKSVAPAGGEA---------------FEARFIE 346
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T + L D + +N L +++ + + +R + VLGL+
Sbjct: 347 AMDDDFNTPEAYSVLFDMAREVNRL--------KSVDMAEANGMASHLRKLSGVLGLLEQ 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
E LQ +K D ++ I+ R ARK K + +D+ R L +GI L D
Sbjct: 399 -EPEAFLQ---SGVKTGDAEVAEIELLIQQRLDARKAKNWSAADSARDRLNEMGIVLEDG 454
Query: 553 PVGTTWR 559
P GTTWR
Sbjct: 455 PQGTTWR 461
>gi|92114173|ref|YP_574101.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
gi|123084029|sp|Q1QVV6.1|SYC_CHRSD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91797263|gb|ABE59402.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
Length = 461
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 289/485 (59%), Gaps = 31/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
+ +YNT++R++E P G+V MYVCG+T YD HIGHARV V FD++ RYLR G+EV
Sbjct: 1 MQIYNTLTRRKETFTPLDAGRVRMYVCGITVYDYCHIGHARVMVAFDMITRYLRWRGFEV 60
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKI+ RA E E +L+ R H+D L L P EPR + H+ I
Sbjct: 61 DYVRNITDIDDKILKRAEENDEPIAALTERMIAAMHEDEGRLGVLRPDREPRATAHVDDI 120
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ +++D G+AY +GDVY+ V +F YG+LS R L+D RAG RV V++ K++P DF
Sbjct: 121 VAMVQRLIDKGYAYPAANGDVYYRVRRFEGYGKLSNRDLDDMRAGSRVEVETAKEDPLDF 180
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GE W SPWG GRPGWHIECSAMS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 181 VLWKAAKPGEASWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLVFPHHENEIAQ 240
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +++ W+H G V +D EKMSKSLGNFFTIR+V+E + P +R L+ +HYRSP
Sbjct: 241 SEAATGRPYVNTWMHAGAVRVDQEKMSKSLGNFFTIREVLEAHAPEVVRYLLLASHYRSP 300
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INY+ L A + Y L + P + F+A+M
Sbjct: 301 INYAPDALSDARRSLERFYNALQ----------------GVAPVAGEVAAGYRERFIAAM 344
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALE-KTIRNVLTVLGLMSTG 493
DD +T LA L D + +N + K++A A E K + VL + G G
Sbjct: 345 DDDFNTAEALAVLFDLARELN------RAKQEAPAHAPALAHELKELGGVLGLFGQDPEG 398
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ + R ++E+ + RIE R A+K K++ +D IR +LAA+GI L D
Sbjct: 399 FLQA-------GAGRLPMSEEDIEARIEARAQAKKAKDFATADGIRDELAALGIVLKDGR 451
Query: 554 VGTTW 558
GTTW
Sbjct: 452 DGTTW 456
>gi|89256953|ref|YP_514315.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
LVS]
gi|115315315|ref|YP_764038.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
OSU18]
gi|134301406|ref|YP_001121374.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156503147|ref|YP_001429212.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|254368215|ref|ZP_04984235.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
257]
gi|254372282|ref|ZP_04987773.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
GA99-3549]
gi|421751146|ref|ZP_16188203.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
AS_713]
gi|421753001|ref|ZP_16190009.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
831]
gi|421756735|ref|ZP_16193634.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
80700103]
gi|421758602|ref|ZP_16195446.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
70102010]
gi|423051325|ref|YP_007009759.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. holarctica
F92]
gi|424673870|ref|ZP_18110799.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
70001275]
gi|109894902|sp|Q2A1T7.1|SYC_FRATH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|122324692|sp|Q0BKI3.1|SYC_FRATO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629822|sp|A7NE53.1|SYC_FRATF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629824|sp|A4IWF2.1|SYC_FRATW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|89144784|emb|CAJ80122.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
LVS]
gi|115130214|gb|ABI83401.1| cysteine--tRNA ligase [Francisella tularensis subsp. holarctica
OSU18]
gi|134049183|gb|ABO46254.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|134254025|gb|EBA53119.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
257]
gi|151570011|gb|EDN35665.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3549]
gi|156253750|gb|ABU62256.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|409088688|gb|EKM88750.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
831]
gi|409088845|gb|EKM88903.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
AS_713]
gi|409092065|gb|EKM92047.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
70102010]
gi|409093282|gb|EKM93232.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
80700103]
gi|417435524|gb|EKT90418.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
70001275]
gi|421952047|gb|AFX71296.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. holarctica
F92]
Length = 464
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 287/485 (59%), Gaps = 29/485 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
YN++S ++E KP K+ MY CGVT YD HIGHAR Y+ FDV+ RY ++ GY+V
Sbjct: 8 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTL 67
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L R + H L+ L PS EPR ++ +P ++
Sbjct: 68 VRNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVA 127
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ G+AY+ +GDV++ V KF +YG+LS + LE + G RV V K+NP DF L
Sbjct: 128 MIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKENPMDFVL 187
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AKEGEP W+SPWG GRPGWHIECSAMS LG +FDIH GG DL FPHHENEIAQS
Sbjct: 188 WKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHHENEIAQSE 247
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +YW+H+G V +++EKMSKSL NFFTI +V+E YHP +R FL T YRS IN
Sbjct: 248 ACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFLASTVYRSEIN 307
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS LE+A + ++ L D E ++ ++P D +++ F+ +M +
Sbjct: 308 YSKENLENAKASVERLFNALRDIE---------PIEVNLPDDA----SEYEEKFIKAMDN 354
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L K IN L T K K +R + VLG++ T E
Sbjct: 355 DFNTPEALAVLFSLAKEINTLKTTNKYKASGYAY--------LLRKLCDVLGILFTDIEE 406
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K AD +E + L I +RT A+K+K Y ++D IR L GI L DS GT
Sbjct: 407 YF-----KQGDGADASEIEKL--IAERTQAKKDKNYARADEIRNQLQQQGIILEDSATGT 459
Query: 557 TWRPA 561
TW+
Sbjct: 460 TWKKG 464
>gi|386012371|ref|YP_005930648.1| protein CysS [Pseudomonas putida BIRD-1]
gi|313499077|gb|ADR60443.1| CysS [Pseudomonas putida BIRD-1]
Length = 460
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/487 (45%), Positives = 285/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R + H+D L+ LPP EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWGPGRPGWHIECS MS LG SFDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVASHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P F F +M
Sbjct: 302 INYSEDSLRDAKGALERFYHALR----------------GLPRVAAKGGEAFVERFSVAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L D ++ IN L + +E+ A L +R + VLG++
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDS--------DVEAAAGLAGRLRELGDVLGVLQLEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LR A + D E + L I+ R AR +K + +SD IR L A+G+ L DS
Sbjct: 398 DDF---LRAGAEGKVDAAEVEGL--IQARLQARADKNWAESDRIRDQLTAMGVVLEDSKG 452
Query: 555 GTTWRPA 561
TTWR A
Sbjct: 453 TTTWRLA 459
>gi|297579367|ref|ZP_06941295.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC385]
gi|417825068|ref|ZP_12471656.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE48]
gi|422909615|ref|ZP_16944258.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-09]
gi|422923151|ref|ZP_16956313.1| cysteinyl-tRNA synthetase [Vibrio cholerae BJG-01]
gi|429886116|ref|ZP_19367682.1| Cysteinyl-tRNA synthetase [Vibrio cholerae PS15]
gi|297536961|gb|EFH75794.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC385]
gi|340046553|gb|EGR07483.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE48]
gi|341634699|gb|EGS59448.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-09]
gi|341644386|gb|EGS68602.1| cysteinyl-tRNA synthetase [Vibrio cholerae BJG-01]
gi|429227010|gb|EKY33067.1| Cysteinyl-tRNA synthetase [Vibrio cholerae PS15]
Length = 459
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/487 (44%), Positives = 298/487 (61%), Gaps = 34/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP V GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E E SL+ R +E + D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY D GDV F V ++ EYG+LS + L+ +AG RV +++ K++P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L L S+P ++ F A+M
Sbjct: 302 LNYSEENLNQARASLERLYNALR------------GLDRSVP---AAGGEEYVTRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L ++ + + +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KSEDMTNASALGSLMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTED--QVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+L Q E + + ED Q+ I+ R +R K++ +D R L +GI L D
Sbjct: 393 --ILYQEPEAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDG 450
Query: 553 PVGTTWR 559
P GTTWR
Sbjct: 451 PNGTTWR 457
>gi|294650979|ref|ZP_06728319.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
gi|292823080|gb|EFF81943.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
Length = 473
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/488 (44%), Positives = 304/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG++ +YVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRNEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKIIARANE GE L+ R+ + ++D +L C+ P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIARANENGESIQQLTARFIDAMNEDAANLGCVAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI+ +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MISTLVNKGAAYPASNGDVYFEVSKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEATTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ AL+ S + +F+N +M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFKAYQQVYGQKTVDALEQSF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + E L T+R + +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQA-------EQATVLYSTLRQLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L + + AL +D + ++Q+ R A+K K++ K+D IR+ L G+ L D+
Sbjct: 408 DEFLKSDIGQDALALSDTDIEDLIQQ---RVDAKKAKDFAKADGIRQSLLDQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTIWRRA 472
>gi|184157544|ref|YP_001845883.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|332874278|ref|ZP_08442197.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|384131638|ref|YP_005514250.1| cysS [Acinetobacter baumannii 1656-2]
gi|385236958|ref|YP_005798297.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|387124491|ref|YP_006290373.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-TJ]
gi|407932282|ref|YP_006847925.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TYTH-1]
gi|417869475|ref|ZP_12514460.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH1]
gi|417872928|ref|ZP_12517811.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH2]
gi|417878946|ref|ZP_12523538.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH3]
gi|417881912|ref|ZP_12526221.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH4]
gi|421203711|ref|ZP_15660846.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AC12]
gi|421533834|ref|ZP_15980114.1| cysteine--tRNA ligase [Acinetobacter baumannii AC30]
gi|421629211|ref|ZP_16069951.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC180]
gi|421687025|ref|ZP_16126761.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-143]
gi|421703081|ref|ZP_16142548.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1122]
gi|421706801|ref|ZP_16146204.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1219]
gi|421790903|ref|ZP_16227093.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-2]
gi|424052919|ref|ZP_17790451.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab11111]
gi|424064410|ref|ZP_17801895.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab44444]
gi|425755223|ref|ZP_18873045.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-113]
gi|445464068|ref|ZP_21449451.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC338]
gi|445481109|ref|ZP_21455771.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-78]
gi|187631665|sp|A3M419.2|SYC_ACIBT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558609|sp|B2HX34.1|SYC_ACIBC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|183209138|gb|ACC56536.1| Cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|193076930|gb|ABO11663.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
gi|322507858|gb|ADX03312.1| cysS [Acinetobacter baumannii 1656-2]
gi|323517455|gb|ADX91836.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|332737503|gb|EGJ68411.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|342230338|gb|EGT95178.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH1]
gi|342230714|gb|EGT95540.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH3]
gi|342232733|gb|EGT97504.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH2]
gi|342238444|gb|EGU02876.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH4]
gi|385878983|gb|AFI96078.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-TJ]
gi|398326755|gb|EJN42898.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AC12]
gi|404566489|gb|EKA71635.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-143]
gi|404670997|gb|EKB38866.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab11111]
gi|404673146|gb|EKB40945.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab44444]
gi|407192917|gb|EKE64090.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1122]
gi|407193200|gb|EKE64368.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1219]
gi|407900863|gb|AFU37694.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TYTH-1]
gi|408702925|gb|EKL48332.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC180]
gi|409988287|gb|EKO44460.1| cysteine--tRNA ligase [Acinetobacter baumannii AC30]
gi|410404321|gb|EKP56389.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-2]
gi|425495265|gb|EKU61454.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-113]
gi|444770795|gb|ELW94937.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-78]
gi|444779964|gb|ELX03936.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC338]
Length = 473
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/488 (44%), Positives = 304/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKLED +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ AL S I +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSF-------IERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + + AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|187931126|ref|YP_001891110.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|229558635|sp|B2SFH9.1|SYC_FRATM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187712035|gb|ACD30332.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 459
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 288/485 (59%), Gaps = 29/485 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
YN++S ++E KP K+ MY CGVT YD HIGHAR Y+ FDV+ RY ++ GY+V
Sbjct: 3 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTL 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN T++DDKII RANE GE L R + H L+ L PS EPR ++ +P ++
Sbjct: 63 VRNITNIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVA 122
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ G+AY+ +GDV++ V KF +YG+LS + LE + G RV V K+NP DF L
Sbjct: 123 MIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKENPMDFVL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AKEGEP W+SPWG GRPGWHIECSAMS LG++FDIH GG DL FPHHENEIAQS
Sbjct: 183 WKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGNTFDIHAGGSDLRFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +YW+H+G V +++EKMSKSL NFFTI +V+E YHP +R FL T YRS IN
Sbjct: 243 ACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFLASTVYRSEIN 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS LE+A + ++ L D E ++ ++P D +++ F+ +M +
Sbjct: 303 YSKENLENAKASVERLFNALRDIE---------PIEVNLPDDA----SEYEEKFIKAMDN 349
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L K IN L T K K +R + VLG++ T E
Sbjct: 350 DFNTPEALAVLFSLAKEINTLKTTNKYKASGYAY--------LLRKLCDVLGILFTDIEE 401
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K AD +E + L I +RT A+K+K Y ++D IR L GI L DS GT
Sbjct: 402 YF-----KQGDGADASEIEKL--IAERTQAKKDKNYARADEIRNQLQQQGIILEDSATGT 454
Query: 557 TWRPA 561
TW+
Sbjct: 455 TWKKG 459
>gi|164686505|ref|ZP_02210533.1| hypothetical protein CLOBAR_00070 [Clostridium bartlettii DSM
16795]
gi|164604516|gb|EDQ97981.1| cysteine--tRNA ligase [Clostridium bartlettii DSM 16795]
Length = 474
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/492 (42%), Positives = 308/492 (62%), Gaps = 36/492 (7%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT+SRK+E KP EGKV MYVCG T Y+ HIG+AR ++ FD L RYL + GY+V +
Sbjct: 11 LYNTLSRKKEEFKPIEEGKVKMYVCGPTVYNFIHIGNARPFIIFDTLRRYLEYRGYDVTF 70
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII R++E P ++ +Y +E+ D L SV P+V+D++ II
Sbjct: 71 VQNFTDVDDKIIKRSHEENITPEEVATKYIKEYFVDADGLGIKRASVHPQVTDNIEQIIA 130
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ ++ D G+AY V+GDVYF KF +YG+LSG K E+ AG R+ V+ +K++P DF LW
Sbjct: 131 FVKELEDKGYAYAVNGDVYFDTKKFKDYGKLSGIKQEELEAGARIEVNDQKRHPMDFVLW 190
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W SPWG GRPGWHIECS MS YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 191 KAKKEGEPGWASPWGEGRPGWHIECSVMSNRYLGETIDIHAGGQDLKFPHHENEIAQSEA 250
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ +YW+HN ++ +++EKMSKSLGNFFT+R++ E+Y +RLF++ THYR+PIN+
Sbjct: 251 RSGKNFSNYWLHNEYINVNNEKMSKSLGNFFTVREISEIYDLEVVRLFMLSTHYRNPINF 310
Query: 378 S---VVQLESASERIFYIYQ----TLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDF 430
S + Q ++ ER++ + T+++ E + + A L+D + F F
Sbjct: 311 SDEILNQSKAGLERLYNAKEKAEFTINNLEDSKMTEEEAKLQDELAS--------FRQKF 362
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLT-VLGL 489
+ +M DD++T ++A+ + K +N + K+ A + AL++ N LT VL +
Sbjct: 363 IDAMDDDVNTADAVSAIFELAKFMNSNITENSSKEFAQK-----ALDEF--NELTGVLNI 415
Query: 490 MSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
++ K+ D+ ++++ + IE RT A+KNK ++ +D IR+ L GI L
Sbjct: 416 VNKD-------------KKEDILDEEIEKLIEQRTEAKKNKNFQLADEIRQQLLDKGIVL 462
Query: 550 MDSPVGTTWRPA 561
D+ G W+ A
Sbjct: 463 EDTRQGVKWKRA 474
>gi|71906558|ref|YP_284145.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
gi|109894895|sp|Q47HK6.1|SYC_DECAR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71846179|gb|AAZ45675.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
Length = 456
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/487 (45%), Positives = 300/487 (61%), Gaps = 33/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN++ R++++ P KV MYVCG+T YD H+GHARV V FD++YR+L+ GY+V
Sbjct: 2 LKIYNSLKREKQVFTPIEPNKVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWLKASGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE L+ R+ H+D L P EPR ++++P +
Sbjct: 62 TYVRNITDIDDKIIKRAIENGETIQQLTNRFIAFMHEDADALGVQRPDYEPRATEYVPEM 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+D+I ++ NG AY+ DGDV ++V KFP YG+LSG+ L+D RAGERV VDS K++P DF
Sbjct: 122 LDLIGKLEANGLAYQASDGDVNYAVRKFPGYGKLSGKSLDDLRAGERVEVDSAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W+SPWG GRPGWHIECSAMS+ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKHAKPGEPAWQSPWGDGRPGWHIECSAMSSKLLGQHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + ++YW+HNGFV +D+EKMSKSLGNFFTIR V+E + +R F++ HYRSP
Sbjct: 242 SEGANCCNFVNYWMHNGFVRVDNEKMSKSLGNFFTIRTVLEQFDAEVVRFFILRAHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L D A + +D + N+F F A++
Sbjct: 302 LNYSDAHLDDARRSLDSLYFALRDVPPAAADIDWS--------------NEFAGRFAAAL 347
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
++D + +A L + +N R +S A L ++ + V+GL+
Sbjct: 348 NEDFDSHGAIAVLFELAAEVN-------------RQKS-AGLSCLLKGLGGVIGLLEREP 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
S L + L E V Q I DR A+K K + ++D IR +L A GI L DSP
Sbjct: 394 SAYL----QGGAGVGGLDEAAVGQMIVDRAAAKKAKNFAEADRIRDELKAAGIILDDSPQ 449
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 450 GTTWRRA 456
>gi|225024891|ref|ZP_03714083.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
23834]
gi|224942349|gb|EEG23558.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
23834]
Length = 473
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/502 (44%), Positives = 291/502 (57%), Gaps = 56/502 (11%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P VEP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDVEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIEALIRNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSDKLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR V++ Y P
Sbjct: 244 GASGHVCGHEHAHTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPP--- 417
+R F++ HYRSP+NYS L+ A + +Y TL + +PP
Sbjct: 304 IVRFFILRAHYRSPLNYSDAHLDDAKNALTRLYNTLAN----------------VPPVEF 347
Query: 418 DTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLES-LAAL 476
+ N + F A+M+DD T +A L + L K Q+ L L AL
Sbjct: 348 QVASEANDYTRRFFAAMNDDFDTVQAVAVLFE--------LAGEANKTQSAELSGCLKAL 399
Query: 477 EKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSD 536
TI GL+ +E L + L+ +++ I R AR +K + +SD
Sbjct: 400 AGTI-------GLLQRNPTEFL----QGGATANGLSNEEIEALIARRKQARADKNWAESD 448
Query: 537 AIRKDLAAVGIALMDSPVGTTW 558
IR LA GI L D GT+W
Sbjct: 449 RIRDLLAEQGITLRDGADGTSW 470
>gi|229515228|ref|ZP_04404688.1| cysteinyl-tRNA synthetase [Vibrio cholerae TMA 21]
gi|229347933|gb|EEO12892.1| cysteinyl-tRNA synthetase [Vibrio cholerae TMA 21]
Length = 459
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/487 (44%), Positives = 298/487 (61%), Gaps = 34/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP V GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E E SL+ R +E + D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY D GDV F V ++ EYG+LS + L+ +AG RV +++ K++P DF
Sbjct: 122 IALVERLIERGFAYIADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L L S+P ++ F A+M
Sbjct: 302 LNYSEENLNQARASLERLYNALR------------GLDRSVP---AAGGEEYVTRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L ++ + + +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDIAREINRL--------KSEDMTNASALGSLMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTED--QVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+L Q E + + ED Q+ I+ R +R K++ +D R L +GI L D
Sbjct: 393 --ILYQEPEAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDG 450
Query: 553 PVGTTWR 559
P GTTWR
Sbjct: 451 PNGTTWR 457
>gi|387823873|ref|YP_005823344.1| cysteinyl-tRNA synthetase [Francisella cf. novicida 3523]
gi|328675472|gb|AEB28147.1| Cysteinyl-tRNA synthetase [Francisella cf. novicida 3523]
Length = 459
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/486 (44%), Positives = 289/486 (59%), Gaps = 31/486 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
YN++S ++E KP K+ MY CGVT YD HIGHAR Y+ FDV+ RY ++ GY+V
Sbjct: 3 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTL 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L R + H L+ L PS EP+ ++ +P +I
Sbjct: 63 VRNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPKATETIPEMIA 122
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI +++ G+AY+ +GDV++ V KF +YG+LS + LE + G RV V K+NP DF L
Sbjct: 123 MIETLIEKGYAYQGANGDVFYRVSKFADYGKLSKQNLEALQQGSRVDVVEEKENPIDFVL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AKEGEP W+SPWG GRPGWHIECSAMS LG +FDIH GG DL FPHHENEIAQS
Sbjct: 183 WKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +YW+H+G V +++EKMSKSL NFFTI +V+E YHP +R FL T YRS IN
Sbjct: 243 ACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFLASTVYRSEIN 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS LE+A + ++ TL D E ++ ++P D +++ F+ +M +
Sbjct: 303 YSKENLENAKASVEKLFNTLRDIE---------PVEVNLPDDA----SEYEEKFIKAMDN 349
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L K IN L T K K +R + VLG++ T E
Sbjct: 350 DFNTPEALAVLFSLAKEINTLKTTNKYKASGYAY--------LLRKLCDVLGILFTDIEE 401
Query: 497 VLLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
K+ D + ++R I +RT A+K+K Y ++D IR L GI L DS G
Sbjct: 402 Y--------FKQGDSVDVGEIERLIVERTQAKKDKNYLRADEIRNQLQEQGIILEDSATG 453
Query: 556 TTWRPA 561
TTW+
Sbjct: 454 TTWKKG 459
>gi|421351582|ref|ZP_15801947.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-25]
gi|395952027|gb|EJH62641.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-25]
Length = 459
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/487 (44%), Positives = 298/487 (61%), Gaps = 34/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP V GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E E SL+ R +E + D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY D GDV F V ++ EYG+LS + L+ +AG RV +++ K++P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L L S+P ++ F A+M
Sbjct: 302 LNYSEENLNQARASLERLYNALR------------GLDRSVP---AAGGEEYVTRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L ++ + + +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDIAREINRL--------KSEDMTNASALGSLMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTED--QVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+L Q E + + ED Q+ I+ R +R K++ +D R L +GI L D
Sbjct: 393 --ILYQEPEAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDG 450
Query: 553 PVGTTWR 559
P GTTWR
Sbjct: 451 PNGTTWR 457
>gi|14521604|ref|NP_127080.1| cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|13878786|sp|Q9UYV2.1|SYC_PYRAB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|5458823|emb|CAB50310.1| cysS cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|380742214|tpe|CCE70848.1| TPA: cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
Length = 477
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/483 (44%), Positives = 293/483 (60%), Gaps = 16/483 (3%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++RK+E +KP +G+V MYVCG T YD H+GHAR Y+ FDV+ RYL H G+ V
Sbjct: 5 VYNTLTRKKEELKPLRDGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGFTVLM 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTD+DDKII RA E GEDP L+ R+ + F +DM L P + PRV++H+ II+
Sbjct: 65 VMNFTDIDDKIIKRAQETGEDPGKLAERFIKVFLEDMNALKVKPADIYPRVTEHIDDIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++ + G+AY VYF V KF +YG+LSG K+E+ R G RV KKNP DFALW
Sbjct: 125 FIKKLKEKGYAYEGSDGVYFEVQKFKDYGKLSGVKIEELRKGARVEPGEGKKNPEDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K AK GEP W+SPWG GRPGWHIECS MS+ YLG SFDIHGGG DL+FPHHENEIAQS A
Sbjct: 185 KKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ + YW+H GFV + EKMSKSLGNF T+R++++ Y P +RLF++ HYRSP++Y
Sbjct: 245 CFGHEWVRYWLHTGFVMVKGEKMSKSLGNFVTVRELLQRYSPEVIRLFVLQKHYRSPLDY 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
+ L+ A + +Y TL + A+ + + + +I + F +M DD
Sbjct: 305 TEEGLQHAKNNLERLYNTLENIRIAMRNAELSYKWSEKDFEAYEAIREARKKFYDAMDDD 364
Query: 438 LHTTVVLAALSDPLKTIND-LLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
+T L A+ + IN +L K K+ +R ALE + V V G+ + E
Sbjct: 365 FNTAEALKAVFEVSNAINKYILEVDKPKESILR----KALE-FFKVVSEVFGIFEDYFKE 419
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
EK + ++L +E R RK K ++ +D IR++L +GI L D T
Sbjct: 420 EKKGEEEKLI--------ELL--VEVRKQLRKEKRFDLADKIREELRKLGIQLEDKGQET 469
Query: 557 TWR 559
W+
Sbjct: 470 VWK 472
>gi|153830573|ref|ZP_01983240.1| cysteinyl-tRNA synthetase [Vibrio cholerae 623-39]
gi|229520308|ref|ZP_04409734.1| cysteinyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
gi|229529129|ref|ZP_04418519.1| cysteinyl-tRNA synthetase [Vibrio cholerae 12129(1)]
gi|254292163|ref|ZP_04962934.1| cysteinyl-tRNA synthetase [Vibrio cholerae AM-19226]
gi|417821192|ref|ZP_12467806.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE39]
gi|419830317|ref|ZP_14353802.1| cysteine--tRNA ligase [Vibrio cholerae HC-1A2]
gi|419837569|ref|ZP_14361007.1| cysteine--tRNA ligase [Vibrio cholerae HC-46B1]
gi|421343906|ref|ZP_15794309.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43B1]
gi|421354512|ref|ZP_15804844.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-45]
gi|422307789|ref|ZP_16394944.1| cysteine--tRNA ligase [Vibrio cholerae CP1035(8)]
gi|422917697|ref|ZP_16952015.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-02A1]
gi|423735520|ref|ZP_17708717.1| cysteine--tRNA ligase [Vibrio cholerae HC-41B1]
gi|423822603|ref|ZP_17716613.1| cysteine--tRNA ligase [Vibrio cholerae HC-55C2]
gi|423855994|ref|ZP_17720418.1| cysteine--tRNA ligase [Vibrio cholerae HC-59A1]
gi|423882868|ref|ZP_17724005.1| cysteine--tRNA ligase [Vibrio cholerae HC-60A1]
gi|423956069|ref|ZP_17734908.1| cysteine--tRNA ligase [Vibrio cholerae HE-40]
gi|423985139|ref|ZP_17738457.1| cysteine--tRNA ligase [Vibrio cholerae HE-46]
gi|423998127|ref|ZP_17741379.1| cysteine--tRNA ligase [Vibrio cholerae HC-02C1]
gi|424009862|ref|ZP_17752799.1| cysteine--tRNA ligase [Vibrio cholerae HC-44C1]
gi|424017020|ref|ZP_17756850.1| cysteine--tRNA ligase [Vibrio cholerae HC-55B2]
gi|424019945|ref|ZP_17759731.1| cysteine--tRNA ligase [Vibrio cholerae HC-59B1]
gi|424625311|ref|ZP_18063772.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-50A1]
gi|424629797|ref|ZP_18068084.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-51A1]
gi|424633841|ref|ZP_18071941.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-52A1]
gi|424636921|ref|ZP_18074929.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-55A1]
gi|424640833|ref|ZP_18078716.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A1]
gi|424648900|ref|ZP_18086563.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A1]
gi|443527820|ref|ZP_21093869.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-78A1]
gi|148873935|gb|EDL72070.1| cysteinyl-tRNA synthetase [Vibrio cholerae 623-39]
gi|150421926|gb|EDN13902.1| cysteinyl-tRNA synthetase [Vibrio cholerae AM-19226]
gi|229332903|gb|EEN98389.1| cysteinyl-tRNA synthetase [Vibrio cholerae 12129(1)]
gi|229342674|gb|EEO07666.1| cysteinyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
gi|340038823|gb|EGQ99797.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE39]
gi|341636579|gb|EGS61273.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-02A1]
gi|395939986|gb|EJH50667.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43B1]
gi|395953637|gb|EJH64250.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-45]
gi|408012740|gb|EKG50509.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-50A1]
gi|408018373|gb|EKG55826.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-52A1]
gi|408023551|gb|EKG60712.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A1]
gi|408024210|gb|EKG61335.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-55A1]
gi|408033180|gb|EKG69738.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A1]
gi|408055353|gb|EKG90286.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-51A1]
gi|408618993|gb|EKK92040.1| cysteine--tRNA ligase [Vibrio cholerae CP1035(8)]
gi|408620090|gb|EKK93102.1| cysteine--tRNA ligase [Vibrio cholerae HC-1A2]
gi|408629831|gb|EKL02495.1| cysteine--tRNA ligase [Vibrio cholerae HC-41B1]
gi|408634579|gb|EKL06814.1| cysteine--tRNA ligase [Vibrio cholerae HC-55C2]
gi|408640897|gb|EKL12679.1| cysteine--tRNA ligase [Vibrio cholerae HC-59A1]
gi|408640992|gb|EKL12773.1| cysteine--tRNA ligase [Vibrio cholerae HC-60A1]
gi|408657928|gb|EKL29003.1| cysteine--tRNA ligase [Vibrio cholerae HE-40]
gi|408664537|gb|EKL35371.1| cysteine--tRNA ligase [Vibrio cholerae HE-46]
gi|408852482|gb|EKL92304.1| cysteine--tRNA ligase [Vibrio cholerae HC-02C1]
gi|408856117|gb|EKL95812.1| cysteine--tRNA ligase [Vibrio cholerae HC-46B1]
gi|408860082|gb|EKL99733.1| cysteine--tRNA ligase [Vibrio cholerae HC-55B2]
gi|408863657|gb|EKM03131.1| cysteine--tRNA ligase [Vibrio cholerae HC-44C1]
gi|408867039|gb|EKM06401.1| cysteine--tRNA ligase [Vibrio cholerae HC-59B1]
gi|443453692|gb|ELT17510.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-78A1]
Length = 459
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/487 (44%), Positives = 298/487 (61%), Gaps = 34/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP V GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E E SL+ R +E + D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY D GDV F V ++ EYG+LS + L+ +AG RV +++ K++P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L L S+P ++ F A+M
Sbjct: 302 LNYSEENLNQARASLERLYNALR------------GLDRSVP---AAGGEEYVTRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L ++ + + +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KSEDMTNASALGSLMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTED--QVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+L Q E + + ED Q+ I+ R +R K++ +D R L +GI L D
Sbjct: 393 --ILYQEPEAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDG 450
Query: 553 PVGTTWR 559
P GTTWR
Sbjct: 451 PNGTTWR 457
>gi|257464496|ref|ZP_05628867.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
gi|257450156|gb|EEV24199.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
Length = 459
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/492 (44%), Positives = 288/492 (58%), Gaps = 40/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP ++GMYVCGVT YDL H GH R +V+FDV+ RYLR+ GY V
Sbjct: 2 LKIYNTLKREKEEFKPINPNQIGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRYSGYNV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E H+D L+ L P VEPR + H+P I
Sbjct: 62 RYVRNITDVDDKIIKRALENKETCDQLVDRMIAEMHKDFDALNILRPDVEPRATKHIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ +++ NG AY DGDV F V+ F +YG LS + LE +AG RV + S KKNP DF
Sbjct: 122 IAMVEKLIANGHAYVAEDGDVMFDVESFKQYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YW+H G +TID EKMSKSLGNFF+IR ++ LY +LR F + HYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YSV L+ A + +Y +L C+ + + F +M
Sbjct: 302 LDYSVENLDLARSALERLYTSLRGCDVS---------------GVAEGGEHYVEAFKTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLL--HTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
DD +T LA L + + +N L K A+RL+ LA VLG
Sbjct: 347 DDDFNTPGALAVLFEIARELNKLKIEDMAKANGLAVRLKELAG----------VLG---- 392
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LL+ ++ + D D+ + I+ R A+ NK + +D +R L A+ I L
Sbjct: 393 -----LLEQEPESFLQGDTNSDEAAEIEALIKQRNEAKANKNWAVADEVRDKLKAMNIVL 447
Query: 550 MDSPVGTTWRPA 561
D+P GT WR A
Sbjct: 448 EDTPNGTIWRKA 459
>gi|416052811|ref|ZP_11578446.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347991603|gb|EGY33066.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 469
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/490 (45%), Positives = 288/490 (58%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NT++R++E+ KP GK+GMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY++
Sbjct: 12 LQLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E ++D L+ L P EPR + H+P I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRIVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID++ +++ AY D GDV F V+ F YG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 132 IDIVQKLIQRRHAYVADNGDVMFDVESFKGYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W+SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNGKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H+G + +D EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLSHYDAESVRYFLLTAHYRSQ 311
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +K+ D+ F +M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGTDKSAVAFGGENFVDT---------------FREAM 356
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T L+ L + + +N L K A RL LAA +LG
Sbjct: 357 DDDFNTPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAA----------ILG---- 402
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LLQL + +A ED+V + I+ R AR K++ +DA R L +GI L
Sbjct: 403 -----LLQLDPEQFLQAGSNEDEVAKIEALIKQRNEARAAKDWAVADAARNALTEMGIVL 457
Query: 550 MDSPVGTTWR 559
D P GTTWR
Sbjct: 458 EDGPNGTTWR 467
>gi|82703002|ref|YP_412568.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
gi|109894912|sp|Q2Y7U5.1|SYC_NITMU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|82411067|gb|ABB75176.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
Length = 464
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/491 (44%), Positives = 296/491 (60%), Gaps = 31/491 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++N+++R+++ P GKV +YVCG+T YD H+GHARV V FD++ R+ R ++V
Sbjct: 2 LKIHNSLAREKQEFIPLTPGKVKVYVCGMTVYDYCHLGHARVMVVFDMVQRWFRANRFDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E +L+ R+ + +D L PPS EPR + H+ +
Sbjct: 62 TYVRNITDIDDKIIRRAQENKESIEALTARFIQAMEEDAAALGVEPPSWEPRATRHVEDM 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI ++D AY +GDVY++V +FP YG+LSG+ L++ RAGERV VD K +P DF
Sbjct: 122 IAMIQVLVDKKLAYPASNGDVYYAVHRFPGYGKLSGKSLDELRAGERVIVDPHKNDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W+SPWGPGRPGWHIECSAM YLG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPQWDSPWGPGRPGWHIECSAMGEHYLGEHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + ++YW+HNGFV ++ EKMSKSLGNFFT+R+++ + P +R F++ HYRSP
Sbjct: 242 SEGAHGHPFVNYWMHNGFVRVNDEKMSKSLGNFFTVREILAHFQPEVVRFFILRAHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ +QLE A + +Y L K + + D + P + + F +M
Sbjct: 302 LNYADMQLEDAGRALDRLYTAL----KGIEVHDEVEIDWDDP---------YASRFREAM 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T LA L D +N RL AL K + VL +L Y
Sbjct: 349 NDDFNTPEALAVLFDLATEVN-----------KTRLPRDIALMKALGGVLGLLQQDPWKY 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
++ + ++V Q I+ R VAR NK+Y ++D IRK+L I L D P
Sbjct: 398 ------FQQADSEDPAFAPEKVEQLIQQRLVARANKDYREADRIRKELMEANIILEDGPH 451
Query: 555 GTTWRPALPLA 565
GTTWR A L+
Sbjct: 452 GTTWRRATGLS 462
>gi|392551107|ref|ZP_10298244.1| cysteinyl-tRNA ligase [Pseudoalteromonas spongiae UST010723-006]
Length = 458
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/487 (46%), Positives = 290/487 (59%), Gaps = 31/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP V GKVGMYVCG+T YD H+GHAR YV+FDV+ R+LRH G++V
Sbjct: 2 LQIYNTLTRQKEAFKPLVAGKVGMYVCGITIYDYCHVGHARTYVSFDVMNRFLRHSGFDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RANE GE +L+ R + H+D L+ LP +EP V+ HM I
Sbjct: 62 TYVRNITDVDDKIIKRANENGEAIDALTVRMTKAMHEDFDALNMLPADIEPTVTGHMDEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+MI +++D AY +GDV F V F +YG LS + L+ +AG RV V K +P DF
Sbjct: 122 IEMIERLIDKKHAYVASNGDVLFDVSTFEQYGSLSQQDLDMLQAGARVDVAEGKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK EP W SPWG GRPGWHIECSAMS +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKVDEPSWSSPWGEGRPGWHIECSAMSNKHLGAHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ WIH G V ++ EKMSKSLGNFFT+R V++ Y ++R FLI HYRS
Sbjct: 242 SCCATGEKYVNTWIHTGMVQVNKEKMSKSLGNFFTLRDVLKEYDRESVRFFLINGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS LE A + IY L E ++ S+ D V N +M
Sbjct: 302 LNYSTENLEQARAAMERIYTALRGVE---------VVETSLENDYVARFN-------TAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T L + + K IN R + A + LA + KT+ +L + +
Sbjct: 346 NDDFNTPEALPVIFELAKEIN-----RLKDEDANQAGQLAFILKTLGEILGI----AQQD 396
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ E+A E +LQR + AR +K + +D R L A+G+ L DS
Sbjct: 397 PESFLQ-GEQADDEVAEIEALILQRNQ----ARADKNWALADEARDKLTALGVVLEDSAG 451
Query: 555 GTTWRPA 561
TTWR A
Sbjct: 452 KTTWRKA 458
>gi|288574958|ref|ZP_06393315.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570699|gb|EFC92256.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 469
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/487 (42%), Positives = 295/487 (60%), Gaps = 20/487 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN ++RK+E P +G+VG Y CG T YD HIG+AR ++ FDVL RY+ GY V
Sbjct: 3 LVLYNDLTRKKEPFVPLKDGEVGFYSCGPTVYDYFHIGNARPFIVFDVLRRYMEFSGYRV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTDVDDK+I RANE+G L+ + ++ +D L + PR ++H+ I
Sbjct: 63 TFVQNFTDVDDKMINRANEMGITVQELAEKTIADYFEDADALGIKRATHYPRATEHIEEI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
ID++ ++ ++G AY VDG VYF V FPEYG+LS + +E+ ++G R+ V+S K+NP DF
Sbjct: 123 IDLVKRLEESGHAYEVDGVVYFDVSSFPEYGKLSRQNIEELQSGSRIEVNSSKRNPLDFV 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+ K GEP W+SPWG GRPGWHIECSAM+ YLG++ DIH GG DL FPHHENEIAQ+
Sbjct: 183 LWKAQKPGEPAWDSPWGKGRPGWHIECSAMAMKYLGNTLDIHSGGTDLTFPHHENEIAQA 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA + YW+HN ++ ID EKMSKSLGNF T R+ + Y PLA+R+F++ HYRSP+
Sbjct: 243 EAATEEVFVRYWLHNEYILIDKEKMSKSLGNFMTAREARKHYSPLAIRMFMLSAHYRSPV 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
N+ L+ A+ + + LH+C D V SI + +DF+A+M
Sbjct: 303 NFGPEGLQQATAAL----ERLHNCWSDFRYAADNRPHSQGQDDIVESIKRHRDDFVAAMD 358
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T + + + + T+N L KG ++ E + A+E R+V +++GL+
Sbjct: 359 DDFNTAGAIGHIFEAVSTVNGHL---KG-NDSLSSEGIKAIEDFFRDVDSIMGLIGLDSD 414
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
D +++ I R AR K++ SDAIR LAA G+ L D+P G
Sbjct: 415 ------------GQDDDSEEIESLIRKREEARSAKDFATSDAIRDQLAAKGVILEDTPQG 462
Query: 556 TTWRPAL 562
T W+ +
Sbjct: 463 TKWKKKI 469
>gi|229523866|ref|ZP_04413271.1| cysteinyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
gi|229337447|gb|EEO02464.1| cysteinyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
Length = 459
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/487 (44%), Positives = 298/487 (61%), Gaps = 34/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP V GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E E SL+ R +E + D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY D GDV F V ++ EYG+LS + L+ +AG RV +++ K++P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L L S+P ++ F A+M
Sbjct: 302 LNYSEENLNQARASLERLYNALR------------GLDRSVP---AAGGEEYVTRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L ++ + + +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KSEDMTNASALGSLMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTED--QVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+L Q E + + ED Q+ I+ R +R K++ +D R L +GI L D
Sbjct: 393 --ILYQEPEAFFQGSAEDEDAAQIEALIKLRNDSRAAKDWANADLARDKLNEMGIVLEDG 450
Query: 553 PVGTTWR 559
P GTTWR
Sbjct: 451 PNGTTWR 457
>gi|109898207|ref|YP_661462.1| cysteinyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
gi|109700488|gb|ABG40408.1| cysteinyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
Length = 464
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/487 (45%), Positives = 301/487 (61%), Gaps = 25/487 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++EL P E KVG+YVCG+T YDLSH+GHAR Y++FD++ RYLRH GYEV
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE L+ R H D + L P +EPRV+ HMP I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTSELTERTIAMMHDDFAAIGLLAPDIEPRVTTHMPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I +I +++ G AY+ GDV F V + +YG+LS + L+ G RV VDS K +P DF
Sbjct: 122 IAIIERLIQRGHAYQAKSGDVLFDVSSYADYGKLSKQDLDQLNMGSRVDVDSDKDDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W+SPWG GRPGWHIECSAM+ +LG FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKTAKPGEPSWQSPWGDGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +DSEKMSKSLGNFFT+R V++ + LR FL+ HYRS
Sbjct: 242 SCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLQQHDAETLRYFLMSAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YS + A + +Y +L D KA + +D + D +T +K +M
Sbjct: 302 LSYSQSNITQARSALERLYTSLRDV-KANTQVDMHS------ADYLTRFDK-------AM 347
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L D K +N +G++ R LA + + N+ VLG++
Sbjct: 348 DDDFNTPEAMAVLFDVAKELNRA--KAEGQEGHERASDLAGV---LINLGKVLGILQRSP 402
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
SE L + ++ D ++ I+ R AR K++ +DA R L A+ I L D P
Sbjct: 403 SEYL-----QGEQQDDDEVAEIEGLIKARNDARAAKDWAAADAARDGLNALNIILEDGPS 457
Query: 555 GTTWRPA 561
GTTWR
Sbjct: 458 GTTWRKG 464
>gi|417568294|ref|ZP_12219157.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|417578880|ref|ZP_12229713.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-17]
gi|395554589|gb|EJG20591.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|395568018|gb|EJG28692.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-17]
Length = 477
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/488 (44%), Positives = 304/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 10 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 69
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 70 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 129
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKLED +AG ERV V+ KK+P DF
Sbjct: 130 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 189
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 190 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 249
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 250 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 309
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ AL S I +F+N +M
Sbjct: 310 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSF-------IERFNN----AM 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 359 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 411
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + + AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 412 DDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 468
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 469 QGTVWRRA 476
>gi|188997490|ref|YP_001931741.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
gi|229558793|sp|B2V6B4.1|SYC_SULSY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|188932557|gb|ACD67187.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 487
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/489 (42%), Positives = 296/489 (60%), Gaps = 7/489 (1%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++ K+E P G+V +Y CGVT YD +H+GH R + FD++ RYLR+LGY V
Sbjct: 3 LKIYNTLTGKKEDFAPIKPGEVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYLRYLGYNV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRNFTDVDDKII RA +S ++ +E+ D P +EPRV+ H+P I
Sbjct: 63 IFVRNFTDVDDKIINRAKNECLPFSVISDKFIKEYFDDAEKFRIEPADIEPRVTTHIPDI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I+ I +++D G+AY DGDVYFSV KF EYG+LS R +++ AG R+ +KK+P DFA
Sbjct: 123 INFIQKLVDAGYAYEADGDVYFSVRKFKEYGKLSKRSIDELLAGARIEPGEKKKDPLDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWKSAK GEP+WESPWG GRPGWH EC AM +LG + DIHGGG+DL FPHHENEIAQ+
Sbjct: 183 LWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPHHENEIAQA 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A YWIHNG VT++ +KMSKSLGN+ ++++ Y P LRL ++ HYRSP+
Sbjct: 243 EALTGKPFARYWIHNGLVTVNGQKMSKSLGNYIKLKEIYSKYEPDILRLLVLSVHYRSPL 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
++S ++E + Y+ L + + +L+ + ++ D +I K + F ++MS
Sbjct: 303 DFSWDKMEETKK----AYERLKNAIEEAEVLNKLPIDENFEGDLYNAIQKAQSGFYSAMS 358
Query: 436 DDLHTTVVLAALSDPLKTINDLLH--TRKGKKQAMRLESLAALEKTIRNV-LTVLGLMST 492
DD +T LA+L ++ +N L + G +ES KT+ ++ + GL +
Sbjct: 359 DDFNTPEALASLFGLVREMNILRDKAIKHGGISKKAIESYKEAAKTLHDIGRDIFGLFDS 418
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ + + K + ED + IE R ARK K++ +D IR LA GI L D+
Sbjct: 419 LQPCIKQEEVKVKEKEESINEDLIQVLIEAREKARKEKQFTIADLIRDKLAEKGIILEDA 478
Query: 553 PVGTTWRPA 561
P GT W+ A
Sbjct: 479 PFGTKWKKA 487
>gi|417853615|ref|ZP_12498974.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. Anand1_goat]
gi|338219221|gb|EGP04909.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. Anand1_goat]
Length = 459
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/490 (45%), Positives = 295/490 (60%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP KVGMYVCG+T YDL H+GH R +V FDV+ RYLR+LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L + E H+D L+ L P VEPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +++ AY +GDV F V+ F EYG+LS + LE +AG RV + + KKNP DF
Sbjct: 122 IAMIEKLIARQHAYVSANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWSSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YWIH+G + +D EKMSKSLGNFFT+R+V+ LY ++R FL+ HYRS
Sbjct: 242 SCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLE---SASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
+NYS L SA ER++ AL+ + P T + F
Sbjct: 302 LNYSEENLNLAHSALERLY------------------TALRGTDPTAVATEGQNYLAAFR 343
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M DD +T ++ L + + IN L + ++ +LAA +R + +LGL
Sbjct: 344 EAMDDDFNTPKAISVLFEIAREINKL-----KNEDILKANALAA---RLRELAGILGL-- 393
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQR--IEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
L Q E+ L+ ++ VL I+ R AR K++ +DA R LA +G+ L
Sbjct: 394 ------LYQDPEQFLQSGSDNDEVVLIEALIKQRNDARAAKDWASADAARNKLAEMGVVL 447
Query: 550 MDSPVGTTWR 559
D+ GTTWR
Sbjct: 448 EDNVNGTTWR 457
>gi|119471530|ref|ZP_01613944.1| cysteinyl-tRNA synthetase [Alteromonadales bacterium TW-7]
gi|119445473|gb|EAW26759.1| cysteinyl-tRNA synthetase [Alteromonadales bacterium TW-7]
Length = 459
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/485 (45%), Positives = 286/485 (58%), Gaps = 30/485 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E KP V+GK+ MYVCG+T YD HIGHAR +V FDV+ RYLRH+GY + Y
Sbjct: 4 IYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYNLKY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TDVDDKII RANE E L+ R + H+D L+ L P VEP V+ HM II+
Sbjct: 64 VRNITDVDDKIIKRANENKESINDLTLRMTKAMHEDFDSLNMLRPDVEPTVTGHMDEIIE 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
M+ +++ G AY DGDV F V F +YG LS + L ++G RV V K +P DF L
Sbjct: 124 MVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK GEP W SPWG GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHENEIAQSC
Sbjct: 184 WKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQSC 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A N +++ WIH G V ++ EKMSKSL NFFT+R V++ Y P ++R FLI HYRS +N
Sbjct: 244 CANNGEYVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVLKEYDPESVRYFLISGHYRSQLN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L+ A + IY AL+D P + N+F F +M D
Sbjct: 304 YSQENLDQARSSLERIY---------------TALRDVKPIECELESNEFVIKFRKAMDD 348
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T L L + K +N R + A++ LA + +TI VL V + E
Sbjct: 349 DFNTPEALPVLFELAKELN-----RVKESDAIQAGQLAFILRTIGEVLGV----AQQAPE 399
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
LQ + + A + I R AR +K + +D R L A+G+ L DS T
Sbjct: 400 AFLQGGQDDNEVATIE-----ALIVKRNDARASKNWAAADEARDALNALGVILEDSAGKT 454
Query: 557 TWRPA 561
TWR A
Sbjct: 455 TWRKA 459
>gi|378773899|ref|YP_005176142.1| cysteinyl-tRNA synthetase [Pasteurella multocida 36950]
gi|356596447|gb|AET15173.1| cysteinyl-tRNA synthase [Pasteurella multocida 36950]
Length = 459
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/490 (45%), Positives = 294/490 (60%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP KVGMYVCG+T YDL H+GH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L + E H+D L+ L P VEPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMISEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +++ AY +GDV F V+ F EYG+LS + LE +AG RV + + KKNP DF
Sbjct: 122 IAMIEKLIARQHAYVSANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWSSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YWIH+G + +D EKMSKSLGNFFT+R+V+ LY ++R FL+ HYRS
Sbjct: 242 SCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLE---SASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
+NYS L SA ER++ AL+ + P T + F
Sbjct: 302 LNYSEENLNLAHSALERLY------------------TALRGTDPTAVATEGQNYLAAFR 343
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M DD +T ++ L + + IN L + ++ +LAA +R + +LGL
Sbjct: 344 EAMDDDFNTPKAISVLFEIAREINKL-----KNEDILKANALAA---RLRELAGILGL-- 393
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQR--IEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
L Q E+ L+ ++ VL I+ R AR K++ +DA R LA +G+ L
Sbjct: 394 ------LYQDPEQFLQSGSDNDEVVLIEALIKQRNDARAAKDWASADAARNKLAEMGVVL 447
Query: 550 MDSPVGTTWR 559
D+ GTTWR
Sbjct: 448 EDNVNGTTWR 457
>gi|379335352|gb|AFD03335.1| cysteinyl-tRNA synthetase [uncultured bacterium W5-15b]
Length = 480
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/482 (40%), Positives = 302/482 (62%), Gaps = 13/482 (2%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YN++++K+E ++ KV MY CG T YD +H+GHAR V+FD++ R+LR+ GY+V +
Sbjct: 10 VYNSLTQKKEEMQTHEGNKVRMYACGPTVYDSAHLGHARSAVSFDIIQRFLRYAGYDVTF 69
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN+TD+DDKII RANELG +S ++ +E+ DM + P +EP+V++H+ II+
Sbjct: 70 VRNYTDIDDKIINRANELGVPAKEISEKFIQEYKDDMASIGVQTPDIEPKVTEHIEQIIE 129
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I I+D G Y + DV+FSV KF YG+LS R +++ G R+ V+ +K++P DFALW
Sbjct: 130 LIQTIIDRGHGYVSENDVFFSVRKFKGYGKLSKRSVDNMLEGVRIDVNEKKQDPLDFALW 189
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K AK+GEP W SPWG GRPGWHIECS MS YLG +F+IHGGG DL+FPHHENEIAQS A
Sbjct: 190 KGAKKGEPSWPSPWGNGRPGWHIECSVMSMEYLGTNFEIHGGGKDLIFPHHENEIAQSEA 249
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A +W+HNG + I+SEKMSKSLGNFFT++ ++ + P ++R F + HY++P ++
Sbjct: 250 ASGEQFAKHWLHNGLIQINSEKMSKSLGNFFTVQNAVKRWTPESIRFFFLSHHYQNPADF 309
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S ++ + IY TL D +++ DS+ P+ ++ KF ++ +M D+
Sbjct: 310 SEQVMDDTEISLERIYTTLKRAN------DLSSVSDSVDPELQENLEKFRENWFRAMCDN 363
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T + L D ++ IN + K +L+ + I+ +V+G++ E
Sbjct: 364 FNTADAIGNLFDLVRAINKSIDANGWTK------TLSDTLEEIKKFSSVVGILEKDPDE- 416
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
L+ R+ + LT +++ IE+R R +K++ ++D IR +L A GI L D GT
Sbjct: 417 YLEGRKSSANLEGLTPEEIEVLIEERKQTRTDKDWARADEIRDELDAKGIVLEDKAGGTI 476
Query: 558 WR 559
W+
Sbjct: 477 WK 478
>gi|329117979|ref|ZP_08246692.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465867|gb|EGF12139.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
Length = 494
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/511 (43%), Positives = 294/511 (57%), Gaps = 48/511 (9%)
Query: 66 DDKPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLY 125
D+ + L LYNT++R++E P V MYVCG+T YD H+GHARV V FD++
Sbjct: 13 DNYTINTKPMLNLYNTLTRQKEAFSPIDPANVRMYVCGMTVYDYCHLGHARVMVVFDMIA 72
Query: 126 RYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVE 185
R+LR GY + YVRN TD+DDKIIARA E GE L+ R+ H+D L L P +E
Sbjct: 73 RWLRECGYPLTYVRNITDIDDKIIARAAENGETIGELTARFIAAMHEDADALGVLRPDLE 132
Query: 186 PRVSDHMPHIIDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAV 244
P+ ++++P +I MI ++ G AY +GDVY++V +FP YGQLSG+ L+D RAGERV V
Sbjct: 133 PKATENIPQMIAMIESLIQKGKAYPAANGDVYYAVREFPAYGQLSGKSLDDLRAGERVEV 192
Query: 245 DSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLV 304
D K++P DF LWK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL
Sbjct: 193 DGFKRDPLDFVLWKAAKAGEPAWESPWGQGRPGWHIECSAMSENLFGDTFDIHGGGADLQ 252
Query: 305 FPHHENEIAQSCAACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFF 348
FPHHENEIAQS A + SH+ YW+HNGF+ +D EKMSKSLGNFF
Sbjct: 253 FPHHENEIAQSVGASGHTCGHDHTLTHHGKPVASHVKYWLHNGFIRVDGEKMSKSLGNFF 312
Query: 349 TIRQVMELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDA 408
TIR V++ Y P +R F++ HYRSP+NYS L+ A + +Y L + A L
Sbjct: 313 TIRDVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALARLYTALKNTPPAGFALSE 372
Query: 409 AALKDSIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAM 468
A N + F A+M+DD T +A L + +N TR
Sbjct: 373 TA-------------NNYTRRFYAAMNDDFGTVEAVAVLFELAGEVNK---TRD------ 410
Query: 469 RLESLAALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARK 528
AAL ++ + ++GL+ +E L + L+ +++ I R AR
Sbjct: 411 -----AALSGCLKALGGIIGLLQRDPTEFL----QGGTASDGLSNEEIENLIAMRKQARA 461
Query: 529 NKEYEKSDAIRKDLAAVGIALMDSPVGTTWR 559
+K + +SD IR L A I L DS TTWR
Sbjct: 462 DKNWAESDRIRDLLTAQNIILEDSAGITTWR 492
>gi|167033877|ref|YP_001669108.1| cysteinyl-tRNA synthetase [Pseudomonas putida GB-1]
gi|187629853|sp|B0KUU0.1|SYC_PSEPG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166860365|gb|ABY98772.1| cysteinyl-tRNA synthetase [Pseudomonas putida GB-1]
Length = 460
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/487 (45%), Positives = 284/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E KP KV MYVCG+T YD H+GH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLSKAKETFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R + H+D L+ LPP EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRANENGETFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWGPGRPGWHIECS MS LG SFDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVASHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P F F +M
Sbjct: 302 INYSEDSLRDAKGALERFYHALR----------------GLPRVAAKGGEAFVERFSMAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L D ++ IN L + LE+ A L +R + VLG++
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDS--------DLEAAAGLAGRLRELGDVLGVLQLEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LR A + D E + L I+ R AR +K + +SD IR L A+G+ L DS
Sbjct: 398 DDF---LRAGAEGKVDAAEVEGL--IQARLQARTDKNWAESDRIRDQLTAMGVVLEDSKG 452
Query: 555 GTTWRPA 561
TTWR A
Sbjct: 453 ATTWRLA 459
>gi|163801179|ref|ZP_02195079.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
gi|159175528|gb|EDP60325.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
Length = 460
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/489 (43%), Positives = 294/489 (60%), Gaps = 37/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R E H D L+ P VEPR + + I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTDRLIGEMHVDFDSLNMKRPDVEPRATQFIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ GFAY D GDV F V +F EYG+LS + L+ +AG RV +++ K++P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVRQFKEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L L + P ++ F A+M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLR------------GLDSNAAP---AGGEEYVTRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L + +E + L +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KTENVEKASELGALMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L +A + D +D+ + IE R +R K++ +D R L +GI L
Sbjct: 393 ---ILHQDPEAFLKGDAGDDEEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLE 449
Query: 551 DSPVGTTWR 559
D GTTWR
Sbjct: 450 DGSEGTTWR 458
>gi|118496920|ref|YP_897970.1| cysteinyl-tRNA synthetase [Francisella novicida U112]
gi|187629823|sp|A0Q4Q1.1|SYC_FRATN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118422826|gb|ABK89216.1| cysteinyl-tRNA synthetase [Francisella novicida U112]
Length = 459
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/486 (44%), Positives = 287/486 (59%), Gaps = 31/486 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
YN++S ++E KP K+ MY CGVT YD HIGHAR Y+ FDV+ RY ++ GY+V
Sbjct: 3 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTL 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L R + H L+ L PS EPR ++ +P ++
Sbjct: 63 VRNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVA 122
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ G+AY+ +GDV++ V KF +YG+LS + LE + G RV V K+NP DF L
Sbjct: 123 MIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKENPMDFVL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AKEGEP W+SPWG GRPGWHIECSAMS LG +FDIH GG DL FPHHENEIAQS
Sbjct: 183 WKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +YW+H+G V +++EKMSKSL NFFTI +V+E YHP +R FL T YRS IN
Sbjct: 243 ACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFLASTVYRSEIN 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS LE+A + ++ L D E ++ ++P D +++ F+ +M +
Sbjct: 303 YSKENLENAKASVERLFNALRDIE---------PIEVNLPDDA----SEYEEKFIKAMDN 349
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L K IN L T K K +R + VLG++ T E
Sbjct: 350 DFNTPEALAVLFSLAKEINTLKTTNKYKASGYAY--------LLRKLCDVLGILFTDIEE 401
Query: 497 VLLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
K+ D + +++ I +RT A+K+K Y ++D IR L GI L DS G
Sbjct: 402 Y--------FKQGDGVDASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSATG 453
Query: 556 TTWRPA 561
TTW+
Sbjct: 454 TTWKKG 459
>gi|421502280|ref|ZP_15949235.1| cysteinyl-tRNA ligase [Pseudomonas mendocina DLHK]
gi|400347127|gb|EJO95482.1| cysteinyl-tRNA ligase [Pseudomonas mendocina DLHK]
Length = 461
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/487 (45%), Positives = 291/487 (59%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +++ +P V +V MYVCG+T YD HIGHARV V FDV+ R+LR GY+V
Sbjct: 3 LSIYNTLTKTKDVFQPLVGNQVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRQRGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L R H+D L L P +EPR + H+ +
Sbjct: 63 TYVRNITDIDDKIIKRANENGEPFEALVERMIAAMHEDEARLSVLRPDIEPRATGHIAGM 122
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS RK+++ + G R+ VD K++P DF
Sbjct: 123 HQMIQTLIDKGYAYAPGNGDVYYRVTKFETYGKLSRRKIDELKIGARIEVDEIKEDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W+SPWG GRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 183 VLWKGAKPGEPSWDSPWGKGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 243 SEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L L ++ P T + +F A+M
Sbjct: 303 INYSEESLKEAKGALERFYNGLK------------GLPEAAPAGGETYVERFG----AAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L + ++ +N L + LAA K + +VL VL L +
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLRES-----DVQAAAGLAAQLKQLASVLGVLQLEPEAF 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D E + L I R AR +K + +SD IR L A+G+ L D
Sbjct: 402 ------LQAGAAGKVDAAEVEAL--IAARLQARADKNWAESDRIRDQLTAMGVVLEDGKG 453
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 454 GTTWRLA 460
>gi|397697053|ref|YP_006534936.1| Cysteinyl-tRNA synthetase [Pseudomonas putida DOT-T1E]
gi|397333783|gb|AFO50142.1| Cysteinyl-tRNA synthetase [Pseudomonas putida DOT-T1E]
Length = 460
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/487 (45%), Positives = 284/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R + H+D L LPP EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRANENGETFDALTARMIDAMHEDERRLSILPPDQEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWGPGRPGWHIECS MS LG SFDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVASHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P F F +M
Sbjct: 302 INYSEDSLRDAKGALERFYHALR----------------GLPRVAAKGGEAFVERFSVAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L D ++ IN L + +E+ A L +R + VLG++
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDS--------DVEAAAGLAGRLRELGDVLGVLQLEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LR A + D E + L I+ R AR +K + +SD IR L A+G+ L DS
Sbjct: 398 DDF---LRAGAEGKVDAAEVEGL--IQARLQARADKNWAESDRIRDQLTAMGVVLEDSKG 452
Query: 555 GTTWRPA 561
TTWR A
Sbjct: 453 TTTWRLA 459
>gi|218767348|ref|YP_002341860.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
gi|34222758|sp|Q9JWJ3.1|SYC_NEIMA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|121051356|emb|CAM07647.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
Length = 699
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/499 (43%), Positives = 293/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 230 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G++FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 469
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 576
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
++N + F A+M+DD T +A L + +N + A L +
Sbjct: 577 ENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAQLAGCL 622
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 623 KALGGIIGLLQRDPTEFL----QGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRD 678
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 679 LLNEHKIILEDNAGGTTWR 697
>gi|410690076|ref|YP_006963796.1| Cysteinyl-tRNA synthetase [Salmonella sp. 14]
gi|389597196|gb|AFK89949.1| Cysteinyl-tRNA synthetase [Salmonella sp. 14]
Length = 463
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/487 (44%), Positives = 293/487 (60%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT +R++E KP G+VGMYVCG+T YDL HIGH R +V+FDV+ RYLR LGY++
Sbjct: 2 LKIYNTYTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMITEMHKDFDALNILRPELEPRATHHISEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVD--SRKKNPA 252
I++ ++ G AY + GDV FSV P YG+LS + LE ++G+RV D K+N
Sbjct: 122 INITETLIRRGHAYIAENGDVMFSVSTDPGYGKLSRQDLEQLQSGDRVRTDVVDVKRNSM 181
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DF LWK +KEGEP W SPWG GRPGWHIECSAM+ +LGH FDIHGGG DL+FPHHENEI
Sbjct: 182 DFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKHLGHHFDIHGGGSDLMFPHHENEI 241
Query: 313 AQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
AQS A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYR
Sbjct: 242 AQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYR 301
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
S +NYS L+ A + +Y +L +K+++ A F F+
Sbjct: 302 SQLNYSEENLKQARSALERLYTSLRGTDKSVAPAGGEA---------------FEARFIE 346
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T + L D + +N L +++ + + +R + VLGL+
Sbjct: 347 AMDDDFNTPEAYSVLFDMAREVNRL--------KSVDMAEANGMASHLRKLSGVLGLLEQ 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
E LQ +K D ++ I+ R ARK K + +D+ R L +GI L D
Sbjct: 399 -EPEAFLQ---SGVKTGDAEVAEIELLIQQRLDARKAKNWSAADSARDRLNEMGIVLEDG 454
Query: 553 PVGTTWR 559
P GTTWR
Sbjct: 455 PQGTTWR 461
>gi|254360582|ref|ZP_04976731.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|452745743|ref|ZP_21945575.1| cysteinyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
gi|153091122|gb|EDN73127.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|452085882|gb|EME02273.1| cysteinyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
Length = 458
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/492 (45%), Positives = 290/492 (58%), Gaps = 41/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR+ GY +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E H+D L+ L P VEPR + H+P I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDELVDRMIAEMHKDFDALNILRPDVEPRATKHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ +++ NG AY DGDV F V+ F +YG LS + LE +AG RV + S KKNP DF
Sbjct: 122 IAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKSIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YW+H G +TID EKMSKSLGNFF+IR ++ LY +LR F + HYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YS+ L+ A + +Y L C+ + ++I V + F +M
Sbjct: 302 LDYSIDNLDLARSALERLYTALRGCDVS---------GEAIGEHYVEA-------FKTAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T LA L + + +N L K A+RL+ LA VLG
Sbjct: 346 DDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAG----------VLG---- 391
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LL+ A + D +D+ + I+ R A+ K + +D +R L A+ I L
Sbjct: 392 -----LLEQDPDAFLKGDANDDETAEIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVL 446
Query: 550 MDSPVGTTWRPA 561
D+P GT WR A
Sbjct: 447 EDTPNGTIWRKA 458
>gi|331006994|ref|ZP_08330231.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC1989]
gi|330419182|gb|EGG93611.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC1989]
Length = 478
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/497 (44%), Positives = 304/497 (61%), Gaps = 36/497 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++ + P GK+ +YVCG+T YD HIGHARV ++FDV+ R+LR G++V
Sbjct: 3 LTIYNTLAREKVIFTPIDAGKIRLYVCGMTVYDYCHIGHARVLISFDVIVRFLRSQGWDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE L++R+ + H+D L+ LPP+ EPR + HM +I
Sbjct: 63 EYVRNITDVDDKIINRAEENGESSEILAQRFIDAMHEDERALNILPPNQEPRATAHMDNI 122
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ +++ +AY + DVY+ V KF YGQLSG+K ++ AG RV V K++P DF
Sbjct: 123 IAMVKTLINKNYAYVASNNDVYYRVGKFGNYGQLSGKKPDELMAGARVEVGDIKEDPRDF 182
Query: 255 ALWKS---------AKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVF 305
ALWK+ K WESPWG GRPGWHIECSAMS + LG+SFDIHGGG DL F
Sbjct: 183 ALWKAIDPSNVVGDGKNAPVSWESPWGAGRPGWHIECSAMSKSCLGNSFDIHGGGPDLPF 242
Query: 306 PHHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLF 365
PHHENEIAQS AA +++YW+H G V +D EKMSKSLGNFFTIR V++ YH +R
Sbjct: 243 PHHENEIAQSEAANGCKYVNYWLHAGAVRVDGEKMSKSLGNFFTIRDVLKKYHSEVIRYL 302
Query: 366 LIGTHYRSPINYSVVQLESASERIFYIYQTLH---DCEKALSLLDAAALKDSIPPDTVTS 422
++ +HYRS INYS L A + YQTL D E A +L DS+
Sbjct: 303 IVNSHYRSSINYSEDNLIEAKSGLDRFYQTLKHYTDVEPAA----IESLSDSV------- 351
Query: 423 INKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRN 482
++ F+ SM+DD +T + L+ + + +KTIN + A + + L A K + N
Sbjct: 352 ---YYQHFVDSMNDDFNTRIALSGMYELIKTINTV-----AVDDAEKAKKLVAELKAMAN 403
Query: 483 VLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDL 542
+L VL T + LQ +K + L+ D + I R A+K+K+Y+++D IR+ L
Sbjct: 404 ILGVLQADPTEF----LQAEDKTSQVVGLSIDVIETLISQRIQAKKDKQYQRADDIRQQL 459
Query: 543 AAVGIALMDSPVGTTWR 559
G+ L DS GT WR
Sbjct: 460 DDQGVLLEDSREGTAWR 476
>gi|375083186|ref|ZP_09730216.1| cysteinyl-tRNA synthetase [Thermococcus litoralis DSM 5473]
gi|374742140|gb|EHR78548.1| cysteinyl-tRNA synthetase [Thermococcus litoralis DSM 5473]
Length = 474
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/482 (42%), Positives = 283/482 (58%), Gaps = 14/482 (2%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNTMS+++E KP +G+V MYVCG T YD +H+GHAR Y+ FDV+ RYL H GY V
Sbjct: 3 VYNTMSKQKEEFKPLRDGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHKGYTVLM 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTD+DDKII RANE GEDP L+ ++ + F +DM L P + PRV++H+ IID
Sbjct: 63 VMNFTDIDDKIIRRANETGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIQDIID 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ ++ + G+AY VYF V K+ EYG+LS ED R G RV KKNP DFALW
Sbjct: 123 FVKKLEEKGYAYEGSDGVYFEVRKYQEYGKLSKINPEDLRKGVRVEPGEGKKNPEDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K AK GEP WESPWG GRPGWHIECS MS YLG SFDIHGGG DL+FPHHENEIAQ+ A
Sbjct: 183 KKAKPGEPKWESPWGKGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQTEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+H GFV + EKMSKSLGNF TIR++++ Y +R F++ HYRSP++Y
Sbjct: 243 CTGKEWVRYWLHTGFVMVKGEKMSKSLGNFVTIRELLQRYSAEVIRFFVLQKHYRSPLDY 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
+ ++ A + +Y TL + AL + D + + F +M DD
Sbjct: 303 TEEGIQHAKNNLERLYNTLENIRIALEKAETPFKWDKEEFELYEVVRDARKKFYEAMDDD 362
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T + + + +N L + K+++ ++L + + V V G+ + E
Sbjct: 363 FNTAEAMKPIFEVANAVNRYLEKVEKPKESVLRKAL----EFFKMVSEVFGIFEDYFKEA 418
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
E+ ++ R+ RK K +E +D IR +L +GI L D+P GT
Sbjct: 419 KETKEEELIELLIEV----------RSALRKQKNFELADKIRSELRELGIQLEDTPQGTI 468
Query: 558 WR 559
W+
Sbjct: 469 WK 470
>gi|398845843|ref|ZP_10602856.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM84]
gi|398253175|gb|EJN38319.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM84]
Length = 460
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 284/485 (58%), Gaps = 30/485 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+S+ +E KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+ Y
Sbjct: 4 IYNTLSKTKEAFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYELTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE +L+ R + H+D L+ L P EPR +DH+ +
Sbjct: 64 VRNITDIDDKIINRANENGESFDALTARMIDAMHEDERRLNILKPDQEPRATDHIAGMHA 123
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF L
Sbjct: 124 MIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK K GEP+W+SPWGPGRPGWHIECS MS LG SFDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKGVKPGEPYWDSPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPHHENEIAQSE 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA + + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS IN
Sbjct: 244 AATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVASHYRSAIN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L A + Y L +P +F F +M+D
Sbjct: 304 YSEDSLRDAKGALERFYHALR----------------GLPRVPAKGGEEFVERFSVAMND 347
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D T A L D ++ IN L + L++ A L +R + VLG++ +
Sbjct: 348 DFGTPEACAVLFDLVREINRLRDS--------DLDAAAGLAGRLRELGDVLGVLQLEADD 399
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
LR A + D E + L I+ R AR +K + +SD IR L A+G+ L D GT
Sbjct: 400 F---LRAGAEGKVDAAEVEAL--IQARLQARTDKNWAESDRIRDQLTAMGVVLEDGKGGT 454
Query: 557 TWRPA 561
TWR A
Sbjct: 455 TWRLA 459
>gi|418289253|ref|ZP_12901614.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM233]
gi|372199990|gb|EHP14134.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM233]
Length = 473
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 293/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++EL P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKELFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAQLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPTEFL----QGSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|169830402|ref|YP_001716384.1| cysteinyl-tRNA synthetase [Candidatus Desulforudis audaxviator
MP104C]
gi|229558630|sp|B1I0T1.1|SYC_DESAP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169637246|gb|ACA58752.1| cysteinyl-tRNA synthetase [Candidatus Desulforudis audaxviator
MP104C]
Length = 478
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/489 (44%), Positives = 290/489 (59%), Gaps = 22/489 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
++NT++ ++E P+ G+V +YVCG T Y+ H+G+AR V FD + RY + GY V Y
Sbjct: 3 IFNTLTGRKETFCPRDPGRVSIYVCGPTTYNFIHLGNARALVVFDTIRRYFLYKGYRVLY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTDVDDKII R+ E G DP +L+ +Y +E+ D L+ V P+VSDH+P II
Sbjct: 63 IQNFTDVDDKIINRSREEGIDPQTLAAKYVDEYFVDADALNVRRADVHPKVSDHIPEIIA 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+IT I+D G AY GDVYF+V KF YG+LS R L+D AG RV V +K++P DFALW
Sbjct: 123 LITMIIDRGLAYVAGGDVYFAVRKFGGYGRLSKRSLDDLLAGARVEVGEQKRDPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK GEP+WESPWG GRPGWHIECSAM+ YLG FDIHGGG DL+FPHHENEIAQS
Sbjct: 183 KAAKPGEPWWESPWGRGRPGWHIECSAMALKYLGTGFDIHGGGADLIFPHHENEIAQSEG 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A YWIHNGF+TI EKMSKSLGN F +R++ LY P ALRLFL+ HYR+P++Y
Sbjct: 243 ATGEPFARYWIHNGFITIREEKMSKSLGNVFLVRELTRLYPPEALRLFLLSNHYRNPLDY 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINK-------FHNDF 430
+E++ + L C L LL +L P N+ F
Sbjct: 303 DPEAMEASVRAV----NRLKTC---LGLL-RESLDRPAPDGDGGGGNRLEAVLEVLQGRF 354
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
A+M DD +T + A + D +N LH + ++L + R VLG+
Sbjct: 355 EAAMDDDFNTALAQAVMFDLTHEVNTYLHQNDRPSRGALQKALDLFDAFNR----VLGIF 410
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
++L E DL++ + I R AR+NK++ +D IR L A+GI L
Sbjct: 411 PEHKGRIVL---EAGAVSGDLSQGLLDLLIALRQDARRNKDFATADRIRDGLRALGILLE 467
Query: 551 DSPVGTTWR 559
D+P G W+
Sbjct: 468 DTPQGVRWK 476
>gi|145636711|ref|ZP_01792377.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
gi|145270009|gb|EDK09946.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
Length = 459
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/488 (44%), Positives = 290/488 (59%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR L Y++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLDYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWSSPWGTGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +++ A A F F +M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQS-----AVAFGGE----------NFVATFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + IN L + +E L +R + +LG
Sbjct: 347 DDDFNTPNALSVLFEMAREINKL--------KTEDVEKANGLAARLRELGAILG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LLQ + +A +D+V + I+ R AR K++ +D+ R +L A+GI L D
Sbjct: 393 ---LLQQEPEKFLQAGSDDDEVAKIEALIKQRNEARVAKDWSAADSARNELTAMGIVLED 449
Query: 552 SPVGTTWR 559
GTTWR
Sbjct: 450 GANGTTWR 457
>gi|240949657|ref|ZP_04753992.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
gi|240295915|gb|EER46591.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
Length = 459
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/492 (45%), Positives = 288/492 (58%), Gaps = 40/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP ++GMYVCGVT YDL H GH R +V+FDV+ RYLR+ GY V
Sbjct: 2 LKIYNTLKREKEEFKPINPNQIGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRYSGYNV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E H+D L+ L P VEPR + H+P I
Sbjct: 62 RYVRNITDVDDKIIKRALENKETCDQLVDRMIAEMHKDFDALNILRPDVEPRATKHIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ M+ +++ NG AY DGDV F V+ F +YG LS + LE +AG RV + S KKNP DF
Sbjct: 122 VAMVEKLIANGHAYVAEDGDVMFDVESFKQYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YW+H G +TID EKMSKSLGNFF+IR ++ LY +LR F + HYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YSV L+ A + +Y L C+ + AA + F +M
Sbjct: 302 LDYSVENLDLARSALERLYTALRGCD-----VSGAA----------EGGEHYVEAFKTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T LA L + + +N L K A+RL+ LA VLGL+
Sbjct: 347 DDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAG----------VLGLLEQ 396
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
E LQ D D+ + I+ R A+ NK + +D +R L A+ I L
Sbjct: 397 D-PESFLQ--------GDTNSDEAAEIEALIKQRNEAKANKNWAVADEVRDKLKAMNIVL 447
Query: 550 MDSPVGTTWRPA 561
D+P GT WR A
Sbjct: 448 EDTPNGTIWRKA 459
>gi|330810612|ref|YP_004355074.1| cysteine--tRNA ligase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423698259|ref|ZP_17672749.1| cysteine--tRNA ligase [Pseudomonas fluorescens Q8r1-96]
gi|327378720|gb|AEA70070.1| Cysteine--tRNA ligase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388005576|gb|EIK66843.1| cysteine--tRNA ligase [Pseudomonas fluorescens Q8r1-96]
Length = 460
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/487 (44%), Positives = 288/487 (59%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD HIGH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD++DKII RA E GE +L+ R + H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIEDKIINRARENGEPYDALTERMIKAMHEDEARLNILKPDLEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 LSMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGAKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V++ YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPSVPAAGGEAFVARFTEVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L + ++ IN L + L + A L ++ + +VLG++
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRES--------DLNAAAGLAARLKELASVLGVLQLEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L+ A R D E + L I+ R AR NK++ +SD IR L A+G+ L D
Sbjct: 398 DDF---LQAGAEGRVDAAEVEAL--IQARLTARANKDWAESDRIRDQLTAMGVVLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|114330220|ref|YP_746442.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
gi|122314719|sp|Q0AJJ4.1|SYC_NITEC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|114307234|gb|ABI58477.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
Length = 467
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/487 (45%), Positives = 295/487 (60%), Gaps = 26/487 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +Y+T++R R P GKV MYVCG+T YD H+GHARV V FD + R+L+ L YEV
Sbjct: 2 LKIYDTLTRSRREFIPLTPGKVKMYVCGMTVYDHCHLGHARVLVVFDSVVRWLQTLDYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E +L+ RY + +D L + PS EPR ++ + +
Sbjct: 62 TYVRNITDIDDKIIRRALENHEPFGALTARYIQAMEEDAAALGIISPSFEPRATECIESM 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI +L G AY + GDV++ V +FP YG+LSG+ L+D RAGERV +D+ K++P DF
Sbjct: 122 VTMIESLLSKGLAYVANNGDVFYDVRRFPGYGKLSGKSLDDLRAGERVEIDTNKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK EP W+SPWG GRPGWHIECSAMS YLG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPDEPSWDSPWGKGRPGWHIECSAMSGHYLGERFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S + H++YW+HNGFV +D+EKMSKSLGNFFT+R+V+ Y P +R F++ HYRSP
Sbjct: 242 SEGVHGHPHVNYWMHNGFVRVDNEKMSKSLGNFFTVREVLARYQPEVVRFFIVRAHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINK-FHNDFLAS 433
+NYS L A + +Y L + + + A T+ +N + F+A+
Sbjct: 302 LNYSDAHLNDARNALERLYTALKNHAPSQAQAAEEATA------TIDWVNDGYAQRFMAA 355
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M+DD +T +A L D N R G A+L K + +L +L
Sbjct: 356 MNDDFNTPEAVAVLFDLASEAN-----RTGNSH------YASLLKALGGILGLLQQSPRQ 404
Query: 494 YSEVLLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
Y L+ A + D + ++R I+ R ARK K + ++DA+R+ LA GI L D
Sbjct: 405 Y------LQHPAHPQNDHHSIEEIERMIQQRLQARKEKNFAQADALRQQLAEAGIILEDG 458
Query: 553 PVGTTWR 559
P GTTWR
Sbjct: 459 PQGTTWR 465
>gi|392373606|ref|YP_003205439.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Candidatus Methylomirabilis oxyfera]
gi|258591299|emb|CBE67598.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Candidatus Methylomirabilis oxyfera]
Length = 530
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/525 (42%), Positives = 306/525 (58%), Gaps = 37/525 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ +K+E +P V G+V MY CG T YD +HIGHAR +TFDV++RYL GY+V
Sbjct: 3 LVVYNTLHQKKERFEPAVPGEVRMYACGPTVYDRAHIGHARAALTFDVVWRYLERRGYKV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN+TDVDDKII RA ELG+ SL E + +DM L P+ EPR + H+ +
Sbjct: 63 SYVRNYTDVDDKIIQRAAELGQSRESLVEEQIEAYRRDMDALGLRTPTEEPRATRHIREM 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I++I ++ G AY VDGDVYF V + +YG+LS R L++ +AG RV VD RK++P DFA
Sbjct: 123 IEIIRTLMAKGVAYSVDGDVYFEVRRSSDYGKLSHRGLDELQAGARVEVDPRKRDPLDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+++ GEP WESPWGPGRPGWHIECSAMS YLG +FDIHGGG DL+FPHHENEIAQS
Sbjct: 183 LWKASRPGEPAWESPWGPGRPGWHIECSAMSMKYLGETFDIHGGGADLIFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A YWIHNGFV I +EKMSKSLGN TIR+++ P A +LFL+GTHYR+P+
Sbjct: 243 ECATGKPFARYWIHNGFVNIRAEKMSKSLGNILTIRELLGRISPCAFKLFLLGTHYRAPV 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALK---DSIPPDTVTSINKFHNDFLA 432
+S L SA+ + L + ++ + + A + DS+P I + ++
Sbjct: 303 EFSEDALISATAAAARFHTVLEEVQRFQDVQGSKADRSRMDSLP--LSGQIREAEQEYTD 360
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T LAAL + K +N L G + + L+ +T+R + +VLG +
Sbjct: 361 AMDDDFNTPRALAALFNLTKGVNVALRDVDGAPEPSLVYGLSMAGETLRTLGSVLGGLFE 420
Query: 493 GYSEVL--LQLREKALKRADLTEDQVLQRIED---------------------------- 522
G EV+ L + A T VL+ D
Sbjct: 421 GPREVVDRLIMTPSAGTSTSGTAASVLRITGDDYCKAREAVESAMASGHTPPTEAIRTIV 480
Query: 523 --RTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPALPLA 565
R + R K++ +DAIR L +G+ + D+ G W A+ A
Sbjct: 481 AYRALCRDRKDWTTADAIRTWLTNLGVVVDDTGDGVRWYVAVARA 525
>gi|395449080|ref|YP_006389333.1| cysteinyl-tRNA synthetase [Pseudomonas putida ND6]
gi|388563077|gb|AFK72218.1| cysteinyl-tRNA synthetase [Pseudomonas putida ND6]
Length = 460
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/487 (45%), Positives = 284/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R + H+D L+ LPP EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRANENGETFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWGPGRPGWHIECS MS LG SFDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVASHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P F F +M
Sbjct: 302 INYSEDSLRDAKGALERFYHALR----------------GLPRVAAKGGEAFVERFSVAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L D ++ IN L + E+ A L +R + VLG++
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDSDP--------EAAAGLAGRLRELGDVLGVLQLEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LR A + D E + L I+ R AR +K + +SD IR L A+G+ L DS
Sbjct: 398 DDF---LRAGAEGKVDAAEVEGL--IQARLQARADKNWAESDRIRDQLTAMGVVLEDSKG 452
Query: 555 GTTWRPA 561
TTWR A
Sbjct: 453 TTTWRLA 459
>gi|209695403|ref|YP_002263332.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
gi|226710839|sp|B6EH43.1|SYC_ALISL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|208009355|emb|CAQ79625.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
Length = 462
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/491 (43%), Positives = 297/491 (60%), Gaps = 39/491 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP EGKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR LGY++
Sbjct: 2 LKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E E +L+ R E H D L P VEPR ++++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENNESCEALTERLIAEMHADFDALKMKRPDVEPRATEYITEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVD--SRKKNPA 252
++++ ++++ GFAY +GDV F V KF EYG+LS + LE +AG RV ++ S K++
Sbjct: 122 VELVERLIERGFAYVASNGDVMFEVKKFDEYGRLSRQDLEQLQAGSRVTLEETSVKRSGM 181
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DF LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL+FPHHENEI
Sbjct: 182 DFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLMFPHHENEI 241
Query: 313 AQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
AQSC A + +++ W+H+G V ID EKMSKSLGNFFTIR V+ Y +R FL+ HYR
Sbjct: 242 AQSCCAHDAKYVNTWMHSGMVMIDREKMSKSLGNFFTIRDVLAHYDSETVRYFLMSGHYR 301
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
S +NYS L A + +Y +L + ++ P T + +F
Sbjct: 302 SQLNYSEENLNQARSSLERLYTSLRGLDLTVT-----------PAGGETFVTRFS----T 346
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M+DD +T + L + + +N L + +E+ + L +R + VLGL+S
Sbjct: 347 AMNDDFNTPEAYSVLFEMAREVNRL--------KTENIEAASKLGALMRELAEVLGLLSQ 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGIA 548
+A + D D + IE R AR K++ +DA R + A+ I
Sbjct: 399 ---------EPEAFLQGDSGSDNEVAEIEALIKARNDARAAKDWSAADAARDAITALNIV 449
Query: 549 LMDSPVGTTWR 559
L D P GTTWR
Sbjct: 450 LEDGPEGTTWR 460
>gi|194324147|ref|ZP_03057921.1| cysteinyl-tRNA synthetase [Francisella novicida FTE]
gi|194321594|gb|EDX19078.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
FTE]
Length = 464
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/486 (44%), Positives = 287/486 (59%), Gaps = 31/486 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
YN++S ++E KP K+ MY CGVT YD HIGHAR Y+ FDV+ RY ++ GY+V
Sbjct: 8 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTL 67
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L R + H L+ L PS EPR ++ +P ++
Sbjct: 68 VRNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVA 127
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ G+AY+ +GDV++ V KF +YG+LS + LE + G RV V K+NP DF L
Sbjct: 128 MIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKENPMDFVL 187
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AKEGEP W+SPWG GRPGWHIECSAMS LG +FDIH GG DL FPHHENEIAQS
Sbjct: 188 WKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHHENEIAQSE 247
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +YW+H+G V +++EKMSKSL NFFTI +V+E YHP +R FL T YRS IN
Sbjct: 248 ACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFLASTVYRSEIN 307
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS LE+A + ++ L D E ++ ++P D +++ F+ +M +
Sbjct: 308 YSKENLENAKASVERLFNALRDIE---------PIEVNLPDDA----SEYEEKFIKAMDN 354
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L K IN L T K K +R + VLG++ T E
Sbjct: 355 DFNTPEALAVLFSLAKEINTLKTTNKYKASGYAY--------LLRKLCDVLGILFTDIEE 406
Query: 497 VLLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
K+ D + +++ I +RT A+K+K Y ++D IR L GI L DS G
Sbjct: 407 Y--------FKQGDGVDASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSATG 458
Query: 556 TTWRPA 561
TTW+
Sbjct: 459 TTWKKG 464
>gi|260557959|ref|ZP_05830171.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|260408469|gb|EEX01775.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|452949314|gb|EME54782.1| cysteinyl-tRNA ligase [Acinetobacter baumannii MSP4-16]
Length = 473
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/488 (44%), Positives = 303/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI ++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVTKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S I +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSF-------IERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + M L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATM-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + ++AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|325578800|ref|ZP_08148847.1| cysteine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
gi|325159624|gb|EGC71756.1| cysteine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
Length = 482
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/490 (45%), Positives = 291/490 (59%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP EGKVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 25 LKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 84
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 85 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 144
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY + GDV F V+ F EYG+LS + L+ +AG R+ ++ KKNP DF
Sbjct: 145 IEIVEKLIARGHAYVANNGDVMFDVESFKEYGKLSRQDLDQLQAGARIEINEIKKNPMDF 204
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 205 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 264
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSL NFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 265 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLSNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 324
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +++ F F +M
Sbjct: 325 LNYSEENLNLAQGALERLYTALRGTDQSAVAFGG---------------ENFVEAFREAM 369
Query: 435 SDDLHTTVVLAALSDPLKTINDLL--HTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
DD +T L+ L + + IN L K A RL LA +LGL
Sbjct: 370 DDDFNTPNALSVLFEMAREINKLKTEDAEKANGLAARLCELAG----------ILGL--- 416
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
L Q EK L+ A +D+V + I+ R AR K++ +DA R +L A+GI L
Sbjct: 417 -----LQQDPEKFLQ-AGSDDDEVAKIEALIKQRNEARAAKDWTAADAARNELTAMGIVL 470
Query: 550 MDSPVGTTWR 559
D P GTTWR
Sbjct: 471 EDGPNGTTWR 480
>gi|315633667|ref|ZP_07888957.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
gi|315477709|gb|EFU68451.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
Length = 459
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/488 (44%), Positives = 289/488 (59%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NT++R++E+ KP GK+GMYVCGVT YDL HIGH R +V FDV+ RYLR+LGYE+
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVVARYLRYLGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCEQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H+G + +D EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 242 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLSAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +K+ D+ F +M
Sbjct: 302 LNYSEENLNLAHGALERLYTALRGTDKSAVAFGGENFVDT---------------FREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + +N L + ++ L +R + +LG
Sbjct: 347 DDDFNTPNALSVLFEMARELNKL--------KTEDMDKANGLAARLRELAGILG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LLQL + +A +D+V + I+ R AR K++ +DA R L +GI L D
Sbjct: 393 ---LLQLDPEQFLQAGSDDDEVAKIEGLIKQRNEARAAKDWPAADAARNALTQMGIVLED 449
Query: 552 SPVGTTWR 559
GTTWR
Sbjct: 450 GLNGTTWR 457
>gi|26989624|ref|NP_745049.1| cysteinyl-tRNA synthetase [Pseudomonas putida KT2440]
gi|37999406|sp|Q88IU4.1|SYC_PSEPK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|24984507|gb|AAN68513.1|AE016483_4 cysteinyl-tRNA synthetase [Pseudomonas putida KT2440]
Length = 460
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/487 (45%), Positives = 285/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R + H+D L+ LPP EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRANENGETFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +++ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKRIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWGPGRPGWHIECS MS LG SFDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVASHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P F F +M
Sbjct: 302 INYSEDSLRDAKGALERFYHALR----------------GLPRVAAKGGEAFVERFSVAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L D ++ IN L + +E+ A L +R + VLG++
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDS--------DVEAAAGLAGRLRELGDVLGVLQLEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LR A + D E + L I+ R AR +K + +SD IR L A+G+ L DS
Sbjct: 398 DDF---LRAGAEGKVDAAEVEGL--IQARLKARADKNWAESDRIRDQLTAMGVVLEDSKG 452
Query: 555 GTTWRPA 561
TTWR A
Sbjct: 453 TTTWRLA 459
>gi|117617683|ref|YP_857264.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117559090|gb|ABK36038.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 458
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/490 (46%), Positives = 294/490 (60%), Gaps = 37/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YD HIGH R +V FDV+ RYLR+ GY++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYSGYQL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E G L+ R + H D L + P VEPR + H+ I
Sbjct: 62 NYVRNVTDVDDKIIKRAAETGVTCDDLTARLIGDMHADFDALGMVRPDVEPRATQHIGEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +LD AY D GDV F VD + +YG+LSG+ LE +AG RV V K+NP DF
Sbjct: 122 IELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W+SPWGPGRPGWHIECSAM++ +LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L D A AAA D + +F +M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPAA-----AAAGGDE-------QVARFKE----AM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D ++ IN +KG+ A+ AAL +R + VLG
Sbjct: 346 DDDFNTPEAYSALFDLVREIN----RQKGEDMAV----AAALGARLRELGAVLG------ 391
Query: 495 SEVLLQLREKALKRADLTEDQVL---QRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+LQ +A + D +++V Q I R AR +K + +DA R L +GI L D
Sbjct: 392 ---ILQQDPEAFLKGDEADEEVAEIEQLIAQRNQARADKNWAAADAARNRLTEMGIVLED 448
Query: 552 SPVGTTWRPA 561
S T+WR A
Sbjct: 449 SAGKTSWRRA 458
>gi|445406289|ref|ZP_21431727.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-57]
gi|444781577|gb|ELX05494.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-57]
Length = 473
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/488 (44%), Positives = 304/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ AL S I +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSF-------IERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + + AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|384424847|ref|YP_005634205.1| cysteinyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
gi|327484400|gb|AEA78807.1| Cysteinyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
Length = 459
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/487 (44%), Positives = 296/487 (60%), Gaps = 34/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP V GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY +
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E E SL+ R +E + D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY D GDV F V ++ EYG+LS + L+ +AG RV +++ K++P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L L S+P ++ F A+M
Sbjct: 302 LNYSEENLNQARASLERLYNALR------------GLDRSVP---AAGGEEYVTRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L ++ + + +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KSEDMTNASALGSLMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTED--QVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+L Q E + + ED Q+ I+ R +R K++ +D R L +GI L D
Sbjct: 393 --ILYQEPEAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDG 450
Query: 553 PVGTTWR 559
P GTTWR
Sbjct: 451 PNGTTWR 457
>gi|261493400|ref|ZP_05989926.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261496665|ref|ZP_05993045.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261307868|gb|EEY09191.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311044|gb|EEY12221.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 469
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/492 (44%), Positives = 288/492 (58%), Gaps = 40/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR+ GY +
Sbjct: 12 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 71
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E H+D L+ L P VEPR + H+P I
Sbjct: 72 RYVRNITDVDDKIIKRALENNETCDELVDRMIAEMHKDFDALNILRPDVEPRATKHIPEI 131
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ +++ NG AY DGDV F V+ F +YG LS + LE +AG RV + S KKNP DF
Sbjct: 132 IAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKSIKKNPMDF 191
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YW+H G +TID EKMSKSLGNFF+IR ++ LY +LR F + HYRS
Sbjct: 252 SCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSL 311
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YS+ L+ A + +Y L C+ + + ++ F +M
Sbjct: 312 LDYSIDNLDLARSALERLYTALRGCDVSGEAIGGEHYVEA---------------FKTAM 356
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T LA L + + +N L K A+RL+ LA VLG
Sbjct: 357 DDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAG----------VLG---- 402
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LL+ A + D +D+ + I+ R A+ K + +D +R L A+ I L
Sbjct: 403 -----LLEQDPDAFLKGDANDDETAEIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVL 457
Query: 550 MDSPVGTTWRPA 561
D+P GT WR A
Sbjct: 458 EDTPNGTIWRKA 469
>gi|363890596|ref|ZP_09317922.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium CM5]
gi|361964885|gb|EHL17890.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium CM5]
Length = 466
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/483 (42%), Positives = 297/483 (61%), Gaps = 24/483 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNTMS ++E K +GKV MY CG T Y+ HIG+AR ++ FD L YL ++GYEV +
Sbjct: 3 IYNTMSSQKEEFKELEKGKVKMYSCGPTVYNYFHIGNARPFIVFDTLRNYLEYIGYEVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII +ANE G PI L+ +Y EE+ +D + +V PRV++++ IID
Sbjct: 63 VQNFTDVDDKIIIKANEEGITPIQLADKYIEEYFKDAKAIGIRKATVHPRVTENIKEIID 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++D GFAY + DVYF V KF EYG+LS + ++D +G R+ ++ K+ P DFALW
Sbjct: 123 FIQDLIDKGFAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARIEINDEKRAPIDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K KEGE W+SPWG GRPGWHIECS MS YLG S DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KGKKEGEIGWDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+++ +YW+HNG++ +D+EKMSKSLGNFFT+R V++ + LR F++ HYRSPINY
Sbjct: 243 RSSHTFANYWMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTLRFFMLSAHYRSPINY 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L A + I ++ L+ +D + + + V + + +F+ M+DD
Sbjct: 303 SKDMLNQAKSSLERIKNCKNNLNFILTKIDKTDMSEQ-EKENVAYLQECKTNFIDKMNDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
L+T + A+ D +K N + K +++T+ + + G+++
Sbjct: 362 LNTADAITAIFDLVKFANTNVSIDSSK---------VFVQQTLDMLNELTGVLNI----- 407
Query: 498 LLQLREKALKRADLTED--QVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
A+ +AD D ++ + IE R +A+K+K++ K+D IR +L +GI + D+ G
Sbjct: 408 -------AMDKADEDVDVAKIEELIEQRNIAKKSKDFAKADTIRDELKQMGIEIKDTRQG 460
Query: 556 TTW 558
W
Sbjct: 461 VQW 463
>gi|389606841|emb|CCA45752.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha522]
Length = 699
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/565 (40%), Positives = 313/565 (55%), Gaps = 60/565 (10%)
Query: 17 IKFSPFINSFHTLQLRPPKPNNRRVFRCFSTLNSS-----PNVIDDKSNGKTDGDDKPAS 71
K S F +F P +F S +N+ P + + K + + +
Sbjct: 171 FKLSEFTKNFANCYAEP-------IFTNISHINNPQLRNVPWSVSTGTEQKLSSEQQRSI 223
Query: 72 ASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHL 131
S +YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR
Sbjct: 224 HSPMTTIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 283
Query: 132 GYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDH 191
GY + YVRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ +++
Sbjct: 284 GYPLTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATEN 343
Query: 192 MPHIIDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKN 250
+P +I MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++
Sbjct: 344 IPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRD 403
Query: 251 PADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHEN 310
P DF LWK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHEN
Sbjct: 404 PLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHEN 463
Query: 311 EIAQSCAACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVM 354
EIAQS A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V+
Sbjct: 464 EIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVL 523
Query: 355 ELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDS 414
+ Y P +R F++ HYRSP+NYS L+ A + +Y TL + AAA
Sbjct: 524 KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTP-------AAAF--- 573
Query: 415 IPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLA 474
D + N + F A+M+DD T +A L + +N + A
Sbjct: 574 ---DLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDA 616
Query: 475 ALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEK 534
L ++ + ++GL+ +E L + L+ +++ I R AR +K + +
Sbjct: 617 HLAGCLKALGGIIGLLQRDPTEFL----QGGAASDGLSNEEIEDLIARRKQARADKNWAE 672
Query: 535 SDAIRKDLAAVGIALMDSPVGTTWR 559
SD IR L I L D+ GTTWR
Sbjct: 673 SDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|325272290|ref|ZP_08138699.1| cysteinyl-tRNA synthetase [Pseudomonas sp. TJI-51]
gi|324102572|gb|EGC00010.1| cysteinyl-tRNA synthetase [Pseudomonas sp. TJI-51]
Length = 460
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/487 (45%), Positives = 284/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LTIYNTLTKAKETFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R + H+D L+ LPP EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWGPGRPGWHIECS MS LG SFDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVASHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P F F +M
Sbjct: 302 INYSEDSLRDAKGALERFYHALR----------------GLPRVAAKGGEAFVERFSVAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L D ++ IN L + +++ A L +R + VLG++
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDS--------DVDAAAGLAGRLRELGDVLGVLQLDA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LR A + D E + L I+ R AR +K + +SD IR L A+G+ L DS
Sbjct: 398 DDF---LRAGAEGKVDAAEVEGL--IQARLQARADKNWAESDRIRDQLTAMGVVLEDSKG 452
Query: 555 GTTWRPA 561
TTWR A
Sbjct: 453 ATTWRLA 459
>gi|330503048|ref|YP_004379917.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina NK-01]
gi|328917334|gb|AEB58165.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina NK-01]
Length = 461
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/487 (45%), Positives = 286/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E KP V MYVCG+T YD HIGHARV V FDV+ R+LR GY+V
Sbjct: 3 LSIYNTLSKVKEPFKPLEGNSVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRQRGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L R H+D L+ L P +EPR + H+ +
Sbjct: 63 TYVRNITDIDDKIIKRANENGEPFEALVERMIAAMHEDEARLNVLRPDIEPRATGHIAGM 122
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D GFAY +GDVY+ V KF YG+LS RK+++ + G R+ VD K++P DF
Sbjct: 123 HQMIQTLIDKGFAYAPGNGDVYYRVTKFETYGKLSRRKIDELKIGARIEVDEIKEDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 183 VLWKAAKPGEPSWESPWGKGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 243 SEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F ++M
Sbjct: 303 INYSEESLKEAKGALERFYNGLK----------------GLPEAAPAGGEAFVERFGSAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L + ++ +N L + LAA K + +VL VL L +
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLRES-----DLQAAAGLAAQLKQLASVLGVLQLEPDAF 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D E + L I R AR +K + +SD IR L A+G+ L D
Sbjct: 402 ------LQAGAAGKVDAAEVEAL--IAARLQARADKNWAESDRIRDQLTAMGVVLEDGKG 453
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 454 GTTWRLA 460
>gi|323526548|ref|YP_004228701.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
gi|323383550|gb|ADX55641.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
Length = 465
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/490 (45%), Positives = 293/490 (59%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R ++ P G V MYVCG+T YD H+GHARV V FD++ R+LR LGYEV
Sbjct: 4 LRIYNTLARDKQTFVPLQAGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGYEV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+ R+ H+D L P +EPR +D +P +
Sbjct: 64 TYVRNITDIDDKIIRRAVENGETIKSLTDRFIAALHEDADALGIARPDIEPRATDFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI + NG+AY+ DGDV ++V KF YG+LSG+ LED RAGERVA + K++P DF
Sbjct: 124 LGMIETLEANGYAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDAKEDPLDF 183
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK +K GEP W+S +G GRPGWHIECSAM + LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKRSKAGEPADTGWDSKYGRGRPGWHIECSAMGCSLLGEHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS AA ++YW+HNG+V ID+EKMSKSL NFFTIR+V+ Y +R F+ HY
Sbjct: 244 IAQSEAATGQPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRFFIARAHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDF 430
RSP+NYS V ++ A + +Y AL D P N+ H F
Sbjct: 304 RSPLNYSDVHIDDARNALGRLY---------------TALTDVAPDGAALDWNEAHAQRF 348
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
A+M+DD +T V ++ L + +N TR AL + +R++ VLGL+
Sbjct: 349 QAAMNDDFNTPVAVSVLFELATEVN---RTRD-----------PALARQLRSLGAVLGLL 394
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
L Q A++ A L + +I +R A++ K+Y +D IR +L G+AL
Sbjct: 395 GREPRAYLQQAAGAAVEGA-LEPAAIEAKIAERAAAKQAKDYAAADRIRAELLEAGVALE 453
Query: 551 DSPVG-TTWR 559
D P G T WR
Sbjct: 454 DKPGGLTEWR 463
>gi|161869111|ref|YP_001598277.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
gi|161594664|gb|ABX72324.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
Length = 699
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/499 (43%), Positives = 292/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 576
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
++N + F A+M+DD T +A L + +N + A L +
Sbjct: 577 ENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAQLAGCL 622
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 623 KALGGIIGLLQRDPTEFL----QGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRD 678
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 679 LLNEHKIILEDNAGGTTWR 697
>gi|395649608|ref|ZP_10437458.1| cysteinyl-tRNA ligase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 462
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/489 (46%), Positives = 287/489 (58%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD HIGH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLSKSKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTARMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWGPGRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGTKPGEPSWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPAVAPAGGEAFVARFTEVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL + +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELAS-------VLGVLQMEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L+ A R D TE L I+ R AR NK++ +SD IR L A+G+ L D
Sbjct: 399 DF------LQAGAEGRVDATEVDAL--IQARLAARVNKDWAESDRIRDQLTAMGVVLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|387772152|ref|ZP_10128111.1| cysteine--tRNA ligase [Haemophilus parahaemolyticus HK385]
gi|386907797|gb|EIJ72499.1| cysteine--tRNA ligase [Haemophilus parahaemolyticus HK385]
Length = 459
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/489 (44%), Positives = 290/489 (59%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR+ GY +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E H+D L+ L P VEPR + H+P I
Sbjct: 62 HYVRNITDVDDKIIKRAIENNETCDQLVDRMIAEMHKDFDALNILRPDVEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ +++ NG AY DGDV F V+ FP+YG LS + L+ +AG RV + S KKNP DF
Sbjct: 122 IAMVEKLIANGHAYVAADGDVMFDVESFPKYGALSRQNLDQLQAGARVEIKSVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP WESPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWESPWGKGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G +TID EKMSKSLGNFF+IR +++LY +LR F + HYRS
Sbjct: 242 SCCAHHGDYVNYWLHTGMLTIDREKMSKSLGNFFSIRYMLDLYDAESLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YS+ L A + +Y L C+ ++P ++ F +M
Sbjct: 302 LDYSIDNLNLARSALERLYTALRGCDL------------TVP---AKGGEQYVEAFKIAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA L + + +N L + E+ L ++ + VLGL+
Sbjct: 347 DDDFNTPGALAVLFEIAREVNKL--------KTEDAETANGLAVCLKELAGVLGLLE--- 395
Query: 495 SEVLLQLREKALKRA--DLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
Q E LK D ++ I+ R A+ K + +D +R L A+ I L D+
Sbjct: 396 -----QDPETFLKGGANDDEAAEIEALIKQRNEAKAAKNWAIADEVRDKLKAMNIVLEDT 450
Query: 553 PVGTTWRPA 561
P GTTWR A
Sbjct: 451 PNGTTWRKA 459
>gi|337754352|ref|YP_004646863.1| cysteinyl-tRNA synthetase [Francisella sp. TX077308]
gi|336445957|gb|AEI35263.1| Cysteinyl-tRNA synthetase [Francisella sp. TX077308]
Length = 459
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/484 (43%), Positives = 291/484 (60%), Gaps = 31/484 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
YN++S K+E KP K+ MY CGVT YD HIGHAR Y+ FDV+ RY ++ G++V +
Sbjct: 3 FYNSLSGKKEEFKPIEPNKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGFDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RA E E L R + H+ L+ L PS EP+ ++ +P +I
Sbjct: 63 VRNITDIDDKIIKRAKENSESTTELVDRNIKAMHEVFDKLNILKPSFEPKATETIPEMIA 122
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI +++ GFAY+ +GDV++ V +F +YG+LS + LE G RV V K+NP DF L
Sbjct: 123 MIETLVEKGFAYQGANGDVFYRVAEFADYGKLSKQNLEALEQGSRVDVVEEKENPMDFVL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AKEGEP WESPWG GRPGWHIECSAMS LG++FDIH GG DL FPHHENE+AQS
Sbjct: 183 WKKAKEGEPAWESPWGAGRPGWHIECSAMSKKILGNTFDIHAGGSDLRFPHHENEVAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +++YW+H+G V +++EKMSKSL NFFTI++V++ YHP +R FL T YRS IN
Sbjct: 243 ACNDCKYVNYWLHSGMVKVNAEKMSKSLNNFFTIKEVLQEYHPEVIRYFLASTVYRSEIN 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L++A + ++ L D E ++ ++P D N++ F+ +M +
Sbjct: 303 YSKENLDNAKASVERLFNALRDIE---------PVEINLPDDA----NEYEEKFIKAMDN 349
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L K IN L T K K +R + VLG++ T
Sbjct: 350 DFNTPEALAVLFSLAKEINTLKTTNKYKASGYAF--------LLRKLCDVLGILFTD--- 398
Query: 497 VLLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
E K+ D + +++ I +R A+K+K Y ++D IR +L GI L DS G
Sbjct: 399 -----TEDYFKQGDGVDASEIEKLIAERAQAKKDKNYARADEIRNELHNQGIILEDSATG 453
Query: 556 TTWR 559
TTW+
Sbjct: 454 TTWK 457
>gi|404399554|ref|ZP_10991138.1| cysteinyl-tRNA ligase [Pseudomonas fuscovaginae UPB0736]
Length = 460
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/487 (44%), Positives = 288/487 (59%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDFCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H+D L+ P +EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMIAAMHEDEARLNIQKPDMEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDESKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V++ YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F +M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPNVPAAGGEAFVERFTQAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L + ++ IN L + + +E+ A L ++ + VLG++
Sbjct: 346 NDDFGTPEACAVLFEMVREINRL--------REIDIEAAAGLAARLKQLADVLGVLQLEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E L+ A R D + + L I+ R AR NK++ +SD IR + A+G+ L D
Sbjct: 398 DEF---LQAGAAGRVDAAQVEAL--IQARLAARANKDWAESDRIRDQITAMGVVLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|148548000|ref|YP_001268102.1| cysteinyl-tRNA synthetase [Pseudomonas putida F1]
gi|187629852|sp|A5W458.1|SYC_PSEP1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148512058|gb|ABQ78918.1| cysteinyl-tRNA synthetase [Pseudomonas putida F1]
Length = 460
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/487 (45%), Positives = 284/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R + H+D L+ LPP EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRANENGETFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWGPGRPGWHIECS MS LG SFDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTRCLGESFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVASHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P F F +M
Sbjct: 302 INYSEDSLRDAKGALERFYHALR----------------GLPRVAAKGGEAFVERFSVAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L D ++ IN L + E+ A L +R + VLG++
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDSDP--------EAAAGLAGRLRELGDVLGVLQLEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LR A + D E + L I+ R AR +K + +SD IR L A+G+ L DS
Sbjct: 398 DDF---LRAGAEGKVDAAEVEGL--IQARLQARADKNWAESDRIRDQLTAMGVVLEDSKG 452
Query: 555 GTTWRPA 561
TTWR A
Sbjct: 453 TTTWRLA 459
>gi|402838090|ref|ZP_10886604.1| cysteine--tRNA ligase [Eubacteriaceae bacterium OBRC8]
gi|402273799|gb|EJU22990.1| cysteine--tRNA ligase [Eubacteriaceae bacterium OBRC8]
Length = 466
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/483 (42%), Positives = 297/483 (61%), Gaps = 24/483 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNTMS ++E K +GKV MY CG T Y+ HIG+AR ++ FD L YL ++GYEV +
Sbjct: 3 IYNTMSSQKEEFKELEKGKVKMYSCGPTVYNYFHIGNARPFIVFDTLRNYLEYIGYEVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII +ANE G PI L+ +Y EE+ +D + +V PRV++++ IID
Sbjct: 63 VQNFTDVDDKIIIKANEEGITPIQLADKYIEEYFKDAKAIGIRKATVHPRVTENIKEIID 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++D GFAY + DVYF V KF EYG+LS + ++D +G R+ ++ K+ P DFALW
Sbjct: 123 FIQDLIDKGFAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARIEINDEKRAPIDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K KEGE W+SPWG GRPGWHIECS MS YLG S DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KGKKEGEIGWDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+++ +YW+HNG++ +D+EKMSKSLGNFFT+R V++ + LR F++ HYRSPINY
Sbjct: 243 RSSHTFANYWMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTLRFFMLSAHYRSPINY 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L A + I ++ L+ +D + + + V + + +F+ M+DD
Sbjct: 303 SKDMLNQAKSSLERIKNCKNNLNFILTKIDKTDMSEQ-EKENVAYLQECKTNFIDKMNDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
L+T + A+ D +K N + K +++T+ + + G+++
Sbjct: 362 LNTADAITAIFDLVKFANTNVSIDSSK---------VFVQQTLDMLNELTGVLNI----- 407
Query: 498 LLQLREKALKRADLTED--QVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
A+ +AD D ++ + IE R +A+K+K++ K+D IR +L +GI + D+ G
Sbjct: 408 -------AMDKADEDVDVAKIEELIEQRNIAKKSKDFAKADEIRDELKQMGIEIKDTRQG 460
Query: 556 TTW 558
W
Sbjct: 461 VQW 463
>gi|254369813|ref|ZP_04985823.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC022]
gi|157122772|gb|EDO66901.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC022]
Length = 464
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/485 (45%), Positives = 284/485 (58%), Gaps = 29/485 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
YN++S ++E KP K+ MY CGVT YD HIGHAR Y+ FDV+ RY ++ GY+V
Sbjct: 8 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTL 67
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L R H L+ L PS EPR ++ +P ++
Sbjct: 68 VRNITDIDDKIIKRANENGESTTELVERNIRAMHDVFARLNILKPSKEPRATETIPEMVA 127
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ G+AY+ +GDV++ V KF +YG+LS + LE + G RV V K+NP DF L
Sbjct: 128 MIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKENPMDFVL 187
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AKEGEP W+SPWG GRPGWHIECSAMS LG +FDIH GG DL FPHHENEIAQS
Sbjct: 188 WKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHHENEIAQSE 247
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +YW+H+G V +++EKMSKSL NFFTI +V+E YHP +R FL T YRS IN
Sbjct: 248 ACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFLASTVYRSEIN 307
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS LE+A + ++ L D E L PD + ++ F+ +M +
Sbjct: 308 YSKENLENAKASVERLFNALRDIEPIEVNL----------PDNAS---EYEEKFIKAMDN 354
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L K IN L T K K + +R + VLG++ T E
Sbjct: 355 DFNTPEALAVLFSLAKEINTLKTTNKYKA--------SGYAYLLRKLCDVLGILFTDIEE 406
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K AD +E + L I +RT A+K+K Y ++D IR L GI L DS GT
Sbjct: 407 YF-----KQGDGADASEIEKL--IAERTQAKKDKNYARADEIRNQLQQQGIILEDSATGT 459
Query: 557 TWRPA 561
TW+
Sbjct: 460 TWKKG 464
>gi|77360989|ref|YP_340564.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
gi|109894923|sp|Q3IF51.1|SYC_PSEHT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|76875900|emb|CAI87121.1| cysteine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
Length = 459
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/491 (45%), Positives = 287/491 (58%), Gaps = 42/491 (8%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E KP VEGK+ MYVCG+T YD HIGHAR +V FDV+ RYLRH+GY++ Y
Sbjct: 4 IYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDLKY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TDVDDKII RANE GE L+ R + H+D L+ L P VEP V+ HM II+
Sbjct: 64 VRNITDVDDKIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDVEPTVTAHMDEIIE 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
M+ +++ G AY DGDV F V F +YG LS + L ++G RV V K +P DF L
Sbjct: 124 MVERLITKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK GEP W SPWG GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHENEIAQSC
Sbjct: 184 WKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQSC 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A N +++ WIH G V ++ EKMSKSL NFFT+R+V++ Y ++R FLI HYRS +N
Sbjct: 244 CANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKQYDAESVRYFLISGHYRSQLN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L+ A + IY L E LD N++ F +M D
Sbjct: 304 YSQENLDQARSSLERIYTALRGVEPVACELDD---------------NEYVIKFRKAMDD 348
Query: 437 DLHTTV---VLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
D +T VL L+ L + D+ + G+ LA + +I VL V
Sbjct: 349 DFNTPEALPVLFELAKELNLVKDIDSQQAGQ--------LAFILGSISEVLGV------- 393
Query: 494 YSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
Q +A + +D+V Q I R AR +K + +D R L+A+G+ L
Sbjct: 394 -----AQQDPEAFLQGGQDDDEVAQIEALIVKRNDARASKNWAAADEARDALSALGVILE 448
Query: 551 DSPVGTTWRPA 561
DS TTWR A
Sbjct: 449 DSAGKTTWRKA 459
>gi|363893842|ref|ZP_09320936.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium ACC19a]
gi|361963344|gb|EHL16422.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium ACC19a]
Length = 466
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/481 (42%), Positives = 298/481 (61%), Gaps = 20/481 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNTMS ++E K +GKV MY CG T Y+ HIG+AR ++ FD L YL ++GYEV +
Sbjct: 3 IYNTMSSQKEEFKELEKGKVKMYSCGPTVYNYFHIGNARPFIVFDTLRNYLEYIGYEVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII +ANE G PI L+ +Y EE+ +D + +V PRV++++ IID
Sbjct: 63 VQNFTDVDDKIIIKANEEGITPIQLADKYIEEYFKDAKAIGIRKATVHPRVTENIKEIID 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++D GFAY + DVYF V KF EYG+LS + ++D +G R+ ++ K+ P DFALW
Sbjct: 123 FIQDLIDKGFAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARIEINDEKRAPIDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K KEGE W+SPWG GRPGWHIECS MS YLG S DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KGKKEGEIGWDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+++ +YW+HNG++ +D+EKMSKSLGNFFT+R V++ + LR F++ HYRSPINY
Sbjct: 243 RSSHTFANYWMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTLRFFMLSAHYRSPINY 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L A + I ++ L+ +D + + + V + + +F+ M+DD
Sbjct: 303 SKDMLNQAKSSLERIKNCKNNLNFILTKIDKTDMSEQ-EKENVAYLQECKTNFIDKMNDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
L+T + A+ D +K N + S+ + + ++ L +L ++ V
Sbjct: 362 LNTADAITAIFDLVKFANTNV-------------SIDSSKVFVQQTLDMLNELTA----V 404
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
L +KA + D+ ++ + IE R +A+K+K++ K+D IR +L +GI + D+ G
Sbjct: 405 LNIAMDKADEDVDVA--KIEELIEQRNIAKKSKDFAKADEIRDELKQMGIEIKDTRQGVQ 462
Query: 558 W 558
W
Sbjct: 463 W 463
>gi|169633852|ref|YP_001707588.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii SDF]
gi|229558610|sp|B0VS71.1|SYC_ACIBS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169152644|emb|CAP01639.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii]
Length = 473
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/488 (44%), Positives = 304/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTMRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YWIH GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWIHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S + +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + ++AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|169796523|ref|YP_001714316.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213156364|ref|YP_002318784.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|215483986|ref|YP_002326211.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|301346200|ref|ZP_07226941.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB056]
gi|301510179|ref|ZP_07235416.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB058]
gi|301594397|ref|ZP_07239405.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB059]
gi|332853945|ref|ZP_08435065.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332870201|ref|ZP_08439096.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|417572308|ref|ZP_12223162.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|421644195|ref|ZP_16084680.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|421657702|ref|ZP_16097952.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|421700456|ref|ZP_16139970.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|421799698|ref|ZP_16235688.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC1]
gi|226735042|sp|B7GWA1.1|SYC_ACIB3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735043|sp|B7IBU3.1|SYC_ACIB5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558611|sp|B0VAU1.1|SYC_ACIBY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169149450|emb|CAM87336.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213055524|gb|ACJ40426.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|213985743|gb|ACJ56042.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|332728301|gb|EGJ59682.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332732368|gb|EGJ63625.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|400207876|gb|EJO38846.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|404569987|gb|EKA75070.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|408506006|gb|EKK07722.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|408711688|gb|EKL56889.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|410409239|gb|EKP61172.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC1]
Length = 473
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/488 (44%), Positives = 304/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ER+ V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERIDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ AL S I +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSF-------IERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + + AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|433480605|ref|ZP_20437886.1| cysteine--tRNA ligase [Neisseria meningitidis 63041]
gi|433514404|ref|ZP_20471186.1| cysteine--tRNA ligase [Neisseria meningitidis 63049]
gi|433520767|ref|ZP_20477475.1| cysteine--tRNA ligase [Neisseria meningitidis 65014]
gi|433541958|ref|ZP_20498396.1| cysteine--tRNA ligase [Neisseria meningitidis 63006]
gi|432213882|gb|ELK69792.1| cysteine--tRNA ligase [Neisseria meningitidis 63041]
gi|432245366|gb|ELL00836.1| cysteine--tRNA ligase [Neisseria meningitidis 63049]
gi|432251383|gb|ELL06752.1| cysteine--tRNA ligase [Neisseria meningitidis 65014]
gi|432275029|gb|ELL30107.1| cysteine--tRNA ligase [Neisseria meningitidis 63006]
Length = 473
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/499 (43%), Positives = 293/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G++FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
++N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAQLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPTEFL----QGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|417551275|ref|ZP_12202353.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
gi|417564947|ref|ZP_12215821.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|395556703|gb|EJG22704.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|400385730|gb|EJP48805.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
Length = 473
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/488 (44%), Positives = 304/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ AL S + +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + + AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|417850906|ref|ZP_12496721.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
gi|338220217|gb|EGP05763.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
Length = 459
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/490 (44%), Positives = 294/490 (60%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP KVGMYVCG+T YDL H+GH R +V FDV+ RYLR+LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L + E H+D L+ L P VEPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +++ AY +GDV F V+ F EYG+LS + LE +AG RV + + KKNP DF
Sbjct: 122 IAMIEKLIARQHAYVSANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWSSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YWIH+G + +D EKMSKSLGNFFT+R+V+ LY ++R FL+ HYRS
Sbjct: 242 SCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLE---SASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
+NYS L SA ER++ AL+ + P T + F
Sbjct: 302 LNYSEENLNLAHSALERLY------------------TALRGTDPTAVATEGQNYLAAFR 343
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M DD +T ++ L + + IN L + ++ +LAA +R + +LGL
Sbjct: 344 EAMDDDFNTPKAISVLFEIAREINKL-----KNEDILKANALAA---RLRELAGILGL-- 393
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQR--IEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
L Q E+ L+ ++ L I+ R AR K++ +DA R LA +G+ L
Sbjct: 394 ------LYQDPEQFLQSGSDNDEVALIEALIKQRNDARTAKDWASADAARNKLAEMGVVL 447
Query: 550 MDSPVGTTWR 559
D+ GTTWR
Sbjct: 448 EDNVNGTTWR 457
>gi|284006809|emb|CBA72076.1| cysteinyl-tRNA synthetase [Arsenophonus nasoniae]
Length = 504
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/487 (45%), Positives = 293/487 (60%), Gaps = 26/487 (5%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
+ L +YNT+SR++E +P GK+GMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY
Sbjct: 41 SMLKIYNTLSRQKEEFRPITPGKIGMYVCGVTIYDLCHIGHGRTFVAFDVISRYLRYLGY 100
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
++ YVRN TDVDDKII RA E E +L+ R E ++D L+ L P EP + H+
Sbjct: 101 DLTYVRNITDVDDKIIKRAAENNETCDALTSRMLIEMYKDFDALNILRPDFEPNATHHIK 160
Query: 194 HIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
II + ++L G AY D GDV F+++ P+YG LS + LE +AG RV V K+NP
Sbjct: 161 EIIALTERLLKRGHAYIADNGDVMFAINSDPDYGLLSRQDLEQLQAGARVEVADVKRNPL 220
Query: 253 DFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEI 312
DF LWK +K EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEI
Sbjct: 221 DFVLWKMSKPNEPSWSSPWGDGRPGWHIECSAMNGKQLGEHFDIHGGGADLMFPHHENEI 280
Query: 313 AQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
AQS A + +++YW+H G V +D EKMSKSL NFFTIR V+ Y +R FL+ HYR
Sbjct: 281 AQSTCANDGPYVNYWMHTGMVMVDREKMSKSLNNFFTIRDVLAHYDAETVRYFLLSGHYR 340
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
S +NY+ L+ A + +Y L D DA +K + F F+A
Sbjct: 341 SQLNYTEENLKQARTSLERLYTALRDT-------DANHVKSA-------DNEIFKQRFMA 386
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M+DD +T + L D + IN L K AM E L +R + +LGL+ T
Sbjct: 387 AMNDDFNTPEAYSVLFDLAREINRL----KVDDMAMANE----LAVQLRQLANILGLL-T 437
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
E LQ R + A++ + + L I+ R ARKNK + ++D+ R +L +GI L DS
Sbjct: 438 QNPEQFLQSRAQVSHSAEIEKIEAL--IKQRNDARKNKFWAQADSARDELTRMGIILEDS 495
Query: 553 PVGTTWR 559
P GT WR
Sbjct: 496 PQGTVWR 502
>gi|445434059|ref|ZP_21439862.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC021]
gi|444756927|gb|ELW81464.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC021]
Length = 473
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/488 (44%), Positives = 305/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S I +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDHSF-------IERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + A+ L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQAAV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + ++AL L++ ++ I+ R A+K K++ K+DAIR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADAIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|348028897|ref|YP_004871583.1| cysteinyl-tRNA synthetase [Glaciecola nitratireducens FR1064]
gi|347946240|gb|AEP29590.1| cysteinyl-tRNA synthetase [Glaciecola nitratireducens FR1064]
Length = 462
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/487 (43%), Positives = 290/487 (59%), Gaps = 31/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++RK+E P VE KVG+YVCG+T YDL H+GHAR Y++FD++ RYLRH GY+V
Sbjct: 2 LQIYNTLTRKKEPFTPLVENKVGLYVCGITVYDLCHMGHARTYLSFDIMVRYLRHAGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E P L++R H+D ++ P +EPRV++HM I
Sbjct: 62 NYVRNITDVDDKIIQRAIANNETPDELTKRTIAMMHEDFASINLTEPDIEPRVTEHMDEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+D+I ++++ AY+ GDV F V + +YG+LS + L AG RV S K +P DF
Sbjct: 122 VDVIQRLIEKKHAYQAPSGDVLFDVSSYEQYGRLSKQDLSQLNAGARVETSSDKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWKSAK EP W SPWG GRPGWHIECSAM+ +LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKSAKPDEPSWASPWGNGRPGWHIECSAMNHKHLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H G V +D KMSKSLGNFFT+R V++++ P LR FL+ HYRS
Sbjct: 242 SCCAFDTPYVNTWMHAGMVQVDDVKMSKSLGNFFTLRDVLKVHDPETLRFFLMSAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINK--FHNDFLA 432
++YS + A + +Y +L D I P+ + + + F A
Sbjct: 302 LSYSQDSISQAKAGLERLYTSLRD----------------ITPNMGVDLAQGGYLARFEA 345
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M+DD + V + L D K +N K A+ LA + K + +L +L + +
Sbjct: 346 AMNDDFNMPVAFSVLFDVAKDLN------KASDPAV-ANDLAGILKKLGAILGILQMAPS 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
Y + L E D +V IE R AR NK++ +DA R L +G+ L D
Sbjct: 399 DYLQGNLGGEE-----GDDLAAKVEALIEQRNTARANKDWPMADAARDGLNEIGVVLEDG 453
Query: 553 PVGTTWR 559
P GTTWR
Sbjct: 454 PSGTTWR 460
>gi|315230286|ref|YP_004070722.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
gi|315183314|gb|ADT83499.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
Length = 474
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/483 (43%), Positives = 284/483 (58%), Gaps = 16/483 (3%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+++++E KP EG+V MYVCG T YD +H+GHAR Y+ FDV+ RYL H GY V
Sbjct: 3 VYNTLTKQKEEFKPLREGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHKGYTVLM 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTD+DDKII RA E GEDP L+ ++ + F +DM L P + PRV++H+ IID
Sbjct: 63 VMNFTDIDDKIIRRAQETGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIEDIID 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ ++ + G+AY VYF V +F +YG+LSG KLE+ R G RV K+NP DFALW
Sbjct: 123 FVKKLEEKGYAYEGSDGVYFEVQRFRDYGKLSGIKLEELRKGARVEPGEGKRNPEDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K AK GEP W+SPWG GRPGWHIECS MS YLG FDIHGGG DL+FPHHENEIAQ+ A
Sbjct: 183 KKAKPGEPKWDSPWGEGRPGWHIECSTMSTKYLGEQFDIHGGGNDLIFPHHENEIAQTEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+H GFV + EKMSKSLGNF TIR++++ Y P +R F++ HYRSP++Y
Sbjct: 243 CTGKEWVRYWLHTGFVMVKGEKMSKSLGNFVTIRELLQRYSPEVIRFFVLQKHYRSPLDY 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
+ ++ A + +Y T+ + AL + + I + F +M DD
Sbjct: 303 TEEGIQHAKNNLEKLYNTIENIRIALEKAEIPFKWSKEEFELYEVIREAKRKFYEAMDDD 362
Query: 438 LHTTVVLAALSDPLKTINDLL-HTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
+T + + + +N L K K+ +R ALE + V V G+ + E
Sbjct: 363 FNTAEAMKPIFEVANAVNKYLAKVEKPKESVLR----KALE-FFKMVGEVFGIFEEYFKE 417
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
E+ ++ I+ R RK K Y +D IR +L +GI L D+P GT
Sbjct: 418 TKETKEEELIELL----------IQVRAELRKQKNYALADKIRAELRELGIQLEDTPQGT 467
Query: 557 TWR 559
W+
Sbjct: 468 IWK 470
>gi|397687288|ref|YP_006524607.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri DSM 10701]
gi|395808844|gb|AFN78249.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri DSM 10701]
Length = 460
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/489 (46%), Positives = 285/489 (58%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E +P +V MYVCG+T YD HIGHARV V FDV+ R+LR GY+V
Sbjct: 2 LSIYNTLSKTKEAFQPLEGNQVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRQRGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L R H+D L+ L P VEPR + H+ +
Sbjct: 62 TYVRNITDIDDKIIRRANENGEPFEALVERMIAAMHEDEARLNVLRPDVEPRATQHIDGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS R++ED + G R+ VD K++P DF
Sbjct: 122 FAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRRRIEDLKIGARIEVDEAKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W+SPWG GRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWQSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E Y P +R L+ +HYRSP
Sbjct: 242 SEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYQPEVVRYLLVSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F A+M
Sbjct: 302 INYSEDSLKEAKGALERFYTALR----------------GLPEVAAAGGENFVERFGAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
DD ++ A L D + IN L + A RL+ L N+L VL +
Sbjct: 346 DDDFNSPEACAVLFDMAREINRLRDADPQAAAALAARLKELG-------NLLGVLQM--- 395
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+V LQ A + D E + L I R AR K + +SD IR L A+G+ L D
Sbjct: 396 -NPDVFLQA--GAEGKVDAAEVEAL--IAARLQARAEKNWAESDRIRDQLTAMGVVLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|421652216|ref|ZP_16092579.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC0162]
gi|425750916|ref|ZP_18868870.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-348]
gi|445457362|ref|ZP_21446507.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC047]
gi|408506489|gb|EKK08197.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC0162]
gi|425484701|gb|EKU51101.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-348]
gi|444776942|gb|ELX00979.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC047]
Length = 473
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/488 (44%), Positives = 306/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S + +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEVSTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ AL S I +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSF-------IERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N R K++ + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELN-----RAVKEE--QADQVTVLYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + + AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|425065810|ref|ZP_18468930.1| Cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
P1059]
gi|404383305|gb|EJZ79759.1| Cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
P1059]
Length = 459
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/490 (44%), Positives = 294/490 (60%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP KVGMYVCG+T YDL H+GH R +V FDV+ RYLR+LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L + E H+D L+ L P VEPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +++ AY +GDV F V+ F EYG+LS + LE +AG RV + + KKNP DF
Sbjct: 122 IAMIEKLIARQHAYVSANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWSSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YWIH+G + +D EKMSKSLGNFFT+R+V+ LY ++R FL+ HYRS
Sbjct: 242 SCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLE---SASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
+NYS L SA ER++ AL+ + P T + F
Sbjct: 302 LNYSEENLNLAHSALERLY------------------TALRGTDPTAVATEGQNYLAAFR 343
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M DD +T ++ L + + IN L + ++ +LAA +R + +LGL
Sbjct: 344 EAMDDDFNTPKAISVLFEIAREINKL-----KNEDILKANALAA---RLRELAGILGL-- 393
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQR--IEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
L Q E+ L+ ++ L I+ R AR K++ +DA R LA +G+ L
Sbjct: 394 ------LYQDPEQFLQSGSDNDEVALIEALIKQRNDARAAKDWASADAARNKLAEMGVVL 447
Query: 550 MDSPVGTTWR 559
D+ GTTWR
Sbjct: 448 EDNVNGTTWR 457
>gi|425063642|ref|ZP_18466767.1| Cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
X73]
gi|404382196|gb|EJZ78657.1| Cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
X73]
Length = 459
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/490 (44%), Positives = 294/490 (60%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP KVGMYVCG+T YDL H+GH R +V FDV+ RYLR+LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L + E H+D L+ L P VEPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +++ AY +GDV F V+ F EYG+LS + LE +AG RV + + KKNP DF
Sbjct: 122 IAMIEKLIARQHAYVSANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGKGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YWIH+G + +D EKMSKSLGNFFT+R+V+ LY ++R FL+ HYRS
Sbjct: 242 SCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLE---SASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
+NYS L SA ER++ AL+ + P T + F
Sbjct: 302 LNYSEENLNLAHSALERLY------------------TALRGTDPTAVATEGQNYLAAFR 343
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M DD +T ++ L + + IN L + ++ +LAA +R + +LGL
Sbjct: 344 EAMDDDFNTPKAISVLFEIAREINKL-----KNEDILKANALAA---RLRELAGILGL-- 393
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQR--IEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
L Q E+ L+ ++ L I+ R AR K++ +DA R LA +G+ L
Sbjct: 394 ------LYQDPEQFLQSGSDNDEVALIEALIKQRNDARAAKDWASADATRNKLAEMGVVL 447
Query: 550 MDSPVGTTWR 559
D+ GTTWR
Sbjct: 448 EDNVNGTTWR 457
>gi|416893541|ref|ZP_11924691.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
gi|347813831|gb|EGY30484.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
Length = 469
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/489 (44%), Positives = 293/489 (59%), Gaps = 38/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NT++R++E+ KP GK+GMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E ++D L+ L P EPR + H+P I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDSLNILRPDFEPRATHHIPEI 131
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 132 IAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H+G + ++ EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVNKEKMSKSLGNFFTIRDVLSHYDAESVRYFLLTAHYRSQ 311
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +K+ D+ F +M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGIDKSAVAFGGENFVDA---------------FRDAM 356
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAM-RLESLAALEKTIRNVLTVLGLMSTG 493
DD +T L+ L + + +N L K + M + LAA +R + +LG
Sbjct: 357 DDDFNTPNALSVLFEMARELNKL------KTEDMAKANGLAA---RLRELAGILG----- 402
Query: 494 YSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
LLQL + +A +D+V + I+ R AR K++ +DA R L +GI L
Sbjct: 403 ----LLQLDPEQFLQAGSDDDEVAKIEGLIKQRNEARAAKDWPAADAARNALTEMGIVLE 458
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 459 DGPNGTTWR 467
>gi|385858044|ref|YP_005904556.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
gi|325208933|gb|ADZ04385.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
Length = 473
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/499 (43%), Positives = 293/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G++FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
++N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAQLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPTEFL----QGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|302188937|ref|ZP_07265610.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
Length = 460
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/487 (45%), Positives = 289/487 (59%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R + H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVVEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L K L + +AA + F F +M
Sbjct: 302 INYSEDSLRESKAALERFYHAL----KGLPVAEAAGGE------------AFVERFSTAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L + ++ IN L + LAA K + +VL VL L + +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRES-----DVTAAAGLAARLKQLASVLGVLQLEADDF 400
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
LR A R D E + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 401 ------LRAGAEGRVDAAEVEAL--IQARLAARAAKDWAESDRIRDQITAMGVLLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|319943420|ref|ZP_08017702.1| cysteine--tRNA ligase [Lautropia mirabilis ATCC 51599]
gi|319743235|gb|EFV95640.1| cysteine--tRNA ligase [Lautropia mirabilis ATCC 51599]
Length = 506
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/517 (43%), Positives = 303/517 (58%), Gaps = 49/517 (9%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN+++R++E +P G+VG+YVCG+T YD HIGHAR+ V FDV+ R+LR GY+V
Sbjct: 5 LKLYNSLTRRKEDFQPLEAGRVGLYVCGMTVYDYCHIGHARMLVAFDVVQRWLRARGYQV 64
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+ R+ H+D L P +EPR + ++P +
Sbjct: 65 TYVRNITDIDDKIIRRAVENGETLSSLTGRFIAAMHEDEAALGIQRPDLEPRATQYVPQM 124
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+D+++ + NG+AYR DGD F V +F YG+L G+ L+D RAGERVAV + K++P DF
Sbjct: 125 LDLVSLLEKNGYAYRSGDGDTLFRVRRFAGYGRLGGKSLDDLRAGERVAVAAGKEDPFDF 184
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK+AK EP W+ P+GPGRPGWH+ECSAMS LG FDIHGGG DL FPHHENE
Sbjct: 185 VLWKAAKPEEPAEACWQGPFGPGRPGWHLECSAMSTRLLGRQFDIHGGGADLQFPHHENE 244
Query: 312 IAQSCAA----CNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLI 367
IAQS AA S + YW+HNGFV +D EKMSKSLGNFFTIR V++ + +R F++
Sbjct: 245 IAQSDAAYFPEGGKSFVRYWLHNGFVQVDGEKMSKSLGNFFTIRDVLKKFDGEVIRFFIV 304
Query: 368 GTHYRSPINYSVVQLESASERIFYIYQTLH-DCEKALSLLDAAALKDSIPPDTVTSINKF 426
+HYRS +NYS L+ A E + +Y L D A + ++ A + +
Sbjct: 305 RSHYRSQVNYSDAGLDDARESLLRLYNALSTDWPAAQAQVEGQAGQGAAVSAGAGQAAAA 364
Query: 427 HND---------------------FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKK 465
F +M DD +T V ++ L + DL TR
Sbjct: 365 ACADGEAARAAVAAIDWSEPRAMRFAEAMDDDFNTPVAVSVL---FELATDLNRTRD--- 418
Query: 466 QAMRLESLAALEKTIRNVLTVLGLMSTGYSEVLLQ---LREKALKRADLTEDQVLQRIED 522
A+E+ +R + VLGL+ G V ++ LR A DL ++ + ++
Sbjct: 419 --------PAIERQLRGLAAVLGLL--GQDPVAVRRNGLRGAAAHEGDLDDNAIQALVDA 468
Query: 523 RTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWR 559
R ARK + + ++DAIR+ LA GI L D P GTTWR
Sbjct: 469 RLAARKARNFAEADAIRQQLAEAGITLEDGPAGTTWR 505
>gi|385792247|ref|YP_005825223.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|328676393|gb|AEB27263.1| Cysteinyl-tRNA synthetase [Francisella cf. novicida Fx1]
Length = 459
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 285/485 (58%), Gaps = 29/485 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
YN++S ++E KP K+ MY CGVT YD HIGHAR Y+ FDV+ RY ++ GY+V
Sbjct: 3 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTL 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L R + H L+ L PS EPR ++ +P ++
Sbjct: 63 VRNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVA 122
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ G+AY+ +GDV++ V KF +YG+LS + LE + G RV V K+NP DF L
Sbjct: 123 MIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKENPMDFVL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK+GEP W SPWG GRPGWHIECSAMS LG +FDIH GG DL FPHHENEIAQS
Sbjct: 183 WKMAKKGEPAWNSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +YW+H+G V +++EKMSKSL NFFTI +V+E YHP +R FL T YRS IN
Sbjct: 243 ACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFLASTVYRSEIN 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS LE+A + ++ L D E ++ ++P D +++ F+ M +
Sbjct: 303 YSKENLENAKASVERLFNALRDIE---------PIEVNLPDDA----SEYEEKFIKVMDN 349
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L K IN L T K K +R + VLG++ T E
Sbjct: 350 DFNTPEALAVLFSLAKEINTLKTTNKYKASGYAY--------LLRKLCDVLGILFTDIEE 401
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K AD +E + L I +RT A+K+K Y ++D IR L GI L DS GT
Sbjct: 402 YF-----KQGDGADASEIEKL--IAERTQAKKDKNYARADEIRNQLQQQGIILEDSATGT 454
Query: 557 TWRPA 561
TW+
Sbjct: 455 TWKKG 459
>gi|212711245|ref|ZP_03319373.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
30120]
gi|212685974|gb|EEB45502.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
30120]
Length = 462
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/485 (44%), Positives = 292/485 (60%), Gaps = 27/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FD + RYLR+LGY+V
Sbjct: 2 LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E L+ R E H+D L+ L P EPR + H+ I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIHEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTESLIERGHAYVADNGDVMFEVKTDPSYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP WESPWG GRPGWHIECSAM++ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSL NFFTIR V+E Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + +Y L +K+ T + + F +M
Sbjct: 302 LNYTEENLKQARTALERLYTALRGTDKSA---------------TPAGGEIYKSRFCEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T +AL D + +N L + +++ + +R + VLGL+
Sbjct: 347 NDDFNTPEAYSALFDMARELNRL--------KTENMDAANGMAAQLRELAKVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ ++ A++ + + L I+ R AR++K++ +D R L A+GI L DS
Sbjct: 398 PETFLQGGAQSEDDAEVAKIEAL--IKQRNDARQSKDWALADQARDALTAMGIVLEDSSA 455
Query: 555 GTTWR 559
GTTWR
Sbjct: 456 GTTWR 460
>gi|379717862|ref|YP_005306198.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
TIGB03]
gi|379726465|ref|YP_005318651.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
TI0902]
gi|377827914|gb|AFB81162.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
TI0902]
gi|377829539|gb|AFB79618.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
TIGB03]
Length = 459
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 286/485 (58%), Gaps = 29/485 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
YN++S ++E KP K+ MY CGVT YD HIGHAR Y+ FDV+ RY ++ GY+V
Sbjct: 3 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTL 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L R + H L+ L PS EPR ++ +P ++
Sbjct: 63 VRNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVA 122
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ G+AY+ + DV++ V KF +YG+LS + LE + G RV V K+NP DF L
Sbjct: 123 MIETLIKKGYAYQGANSDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKENPMDFVL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AKEGEP W+SPWG GRPGWHIECSAMS LG +FDIH GG DL FPHHENEIAQS
Sbjct: 183 WKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +YW+H+G V +++EKMSKSL NFFTI +V+E YHP +R FL T YRS IN
Sbjct: 243 ACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFLASTVYRSEIN 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS LE+A + ++ L D E ++ ++P D +++ F+ +M +
Sbjct: 303 YSKENLENAKASVERLFNALRDIE---------PIEVNLPDDA----SEYEEKFIKAMDN 349
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L K IN L T K K +R + VLG++ T E
Sbjct: 350 DFNTPEALAVLFSLAKEINTLKTTNKYKASGYAY--------LLRKLCDVLGILFTDIEE 401
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K AD +E + L I +RT A+K+K Y ++D IR L GI L DS GT
Sbjct: 402 YF-----KQGDGADASEIEKL--IAERTQAKKDKNYVRADEIRNQLQQQGIILEDSATGT 454
Query: 557 TWRPA 561
TW+
Sbjct: 455 TWKKG 459
>gi|310826702|ref|YP_003959059.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
gi|308738436|gb|ADO36096.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
Length = 465
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/488 (43%), Positives = 304/488 (62%), Gaps = 29/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT+++K+E P EGKV MY CG T Y+ HIG+AR ++ FDVL R+L ++GY+V +
Sbjct: 3 LYNTLTQKKEAFVPIEEGKVRMYSCGPTVYNYFHIGNARPFIVFDVLRRFLEYIGYDVKF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII R+ E G ++ +Y E+ +D L V PRVSDHMP II+
Sbjct: 63 VQNFTDVDDKIINRSIEEGITAAEVADKYIAEYFKDADALGIRRADVHPRVSDHMPEIIE 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
MI ++ G AY VDG+VY+ VD F +YG+LS + ++D ++G R+ V+ K++P DFALW
Sbjct: 123 MIKELEARGLAYNVDGNVYYQVDHFHDYGKLSKQSIDDLKSGARIDVNDEKRSPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K K+GEP+WESPWG GRPGWHIECSAMS +LG S DIHGGG DL+FPHHENEIAQS
Sbjct: 183 KKKKDGEPYWESPWGQGRPGWHIECSAMSRKHLGESIDIHGGGQDLIFPHHENEIAQSEG 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+C +YW+HNG++ I++EKMSKS GNFFT+R + + Y +R+F++ HYRSP+N+
Sbjct: 243 SCGCKFANYWVHNGYININNEKMSKSKGNFFTVRDIAKHYDLEVVRMFMLMAHYRSPVNF 302
Query: 378 S---VVQLESASERIFYI-YQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
S + Q ++A ER++ YQ + E S +AA+ + D + ++ F+ +
Sbjct: 303 SDELLGQAQNALERLYNAKYQMEYLLENNKS--EAASEDEKTWMDNLA---QYKKGFIDA 357
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M+DDL+T +AA+ + ++ N L +A E++ A + + V+GL +
Sbjct: 358 MNDDLNTADAIAAIFELVRDTNSNL------SEASSREAVKAALDLFKELTGVIGLAAKE 411
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
K DL E +V I R ARKNK++ +D IR L A GI L D+
Sbjct: 412 -------------KETDL-EAEVEALIAQRQEARKNKDFSLADEIRDALLAKGIILEDTR 457
Query: 554 VGTTWRPA 561
G W+ A
Sbjct: 458 EGVKWKKA 465
>gi|56708635|ref|YP_170531.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110671107|ref|YP_667664.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
FSC198]
gi|254371268|ref|ZP_04987270.1| hypothetical protein FTBG_01042 [Francisella tularensis subsp.
tularensis FSC033]
gi|254875501|ref|ZP_05248211.1| cysS, cysteinyl-tRNA synthetase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|385795338|ref|YP_005831744.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
NE061598]
gi|421756284|ref|ZP_16193204.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
80700075]
gi|61216126|sp|Q5NEL1.1|SYC_FRATT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123063359|sp|Q14G14.1|SYC_FRAT1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56605127|emb|CAG46249.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110321440|emb|CAL09632.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
FSC198]
gi|151569508|gb|EDN35162.1| hypothetical protein FTBG_01042 [Francisella tularensis subsp.
tularensis FSC033]
gi|254841500|gb|EET19936.1| cysS, cysteinyl-tRNA synthetase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159873|gb|ADA79264.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
NE061598]
gi|409085022|gb|EKM85176.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
80700075]
Length = 464
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 287/485 (59%), Gaps = 29/485 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
YN++S ++E KP K+ MY CGVT YD HIGHAR Y+ FDV+ RY ++ GY+V
Sbjct: 8 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTL 67
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L R + H L+ L PS EPR ++ +P ++
Sbjct: 68 VRNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVA 127
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ G+AY+ + DV++ V KF +YG+LS + LE + G RV V K+NP DF L
Sbjct: 128 MIETLIKKGYAYQGANSDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKENPMDFVL 187
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AKEGEP W+SPWG GRPGWHIECSAMS LG +FDIH GG DL FPHHENEIAQS
Sbjct: 188 WKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHHENEIAQSE 247
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +YW+H+G V +++EKMSKSL NFFTI +V+E YHP +R FL T YRS IN
Sbjct: 248 ACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFLASTVYRSEIN 307
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS LE+A + ++ L D E ++ ++P D +++ F+ +M +
Sbjct: 308 YSKENLENAKASVERLFNALRDIE---------PIEVNLPDDA----SEYEEKFIKAMDN 354
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L K IN L T K K + +R + VLG++ T E
Sbjct: 355 DFNTPEALAVLFSLAKEINTLKTTNKYKA--------SGYAYLLRKLCDVLGILFTDIEE 406
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K AD +E + L I +RT A+K+K Y ++D IR L GI L DS GT
Sbjct: 407 YF-----KQGDGADASEIEKL--IAERTQAKKDKNYVRADEIRNQLQQQGIILEDSATGT 459
Query: 557 TWRPA 561
TW+
Sbjct: 460 TWKKG 464
>gi|411008777|ref|ZP_11385106.1| cysteinyl-tRNA ligase [Aeromonas aquariorum AAK1]
Length = 458
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/490 (46%), Positives = 297/490 (60%), Gaps = 37/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YD HIGH R +V FDV+ RYLR+ GY++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYSGYQL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E G L+ R + H D L + P VEPR + H+ I
Sbjct: 62 NYVRNVTDVDDKIIKRAAETGVTCDDLTERLIGDMHADFDALGMVRPDVEPRATQHIGEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +LD AY D GDV F VD + +YG+LSG+ LE +AG RV V K+NP DF
Sbjct: 122 IELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W+SPWGPGRPGWHIECSAM++ +LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L D A AAA D +++F +M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPAA-----AAAGGDE-------QVDRFKE----AM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D ++ IN +KG+ A+ A L +R + VLG
Sbjct: 346 DDDFNTPEAYSALFDLVREIN----RQKGEDMAV----AAGLGARLRELGAVLG------ 391
Query: 495 SEVLLQLREKALKRADLTEDQV--LQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+LQ +A + D +++V ++R I +R AR +K + +DA R L +GI L D
Sbjct: 392 ---ILQQDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMGIVLED 448
Query: 552 SPVGTTWRPA 561
S T+WR A
Sbjct: 449 SAGKTSWRRA 458
>gi|15602810|ref|NP_245882.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. Pm70]
gi|13431884|sp|P57890.1|SYC_PASMU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|12721267|gb|AAK03029.1| CysS [Pasteurella multocida subsp. multocida str. Pm70]
Length = 459
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/490 (44%), Positives = 294/490 (60%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP KVGMYVCG+T YDL H+GH R +V FDV+ RYLR+LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L + E H+D L+ L P VEPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +++ AY +GDV F V+ F EYG+LS + LE +AG RV + + KKNP DF
Sbjct: 122 IAMIEKLIARQHAYVSANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YWIH+G + +D EKMSKSLGNFFT+R+V+ LY ++R FL+ HYRS
Sbjct: 242 SCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLE---SASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
+NYS L SA ER++ AL+ + P T + F
Sbjct: 302 LNYSEENLNLAHSALERLY------------------TALRGTDPTAVATEGQNYLAAFR 343
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M DD +T ++ L + + IN L + ++ +LAA +R + +LGL
Sbjct: 344 EAMDDDFNTPKAISVLFEIAREINKL-----KNEDILKANALAA---RLRELAGILGL-- 393
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQR--IEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
L Q E+ L+ ++ L I+ R AR K++ +DA R LA +G+ L
Sbjct: 394 ------LYQDPEQFLQSGSDNDEVALIEALIKQRNDARAAKDWASADAARNKLAEMGVVL 447
Query: 550 MDSPVGTTWR 559
D+ GTTWR
Sbjct: 448 EDNVNGTTWR 457
>gi|430377175|ref|ZP_19431308.1| cysteinyl-tRNA ligase [Moraxella macacae 0408225]
gi|429540312|gb|ELA08341.1| cysteinyl-tRNA ligase [Moraxella macacae 0408225]
Length = 470
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 299/493 (60%), Gaps = 33/493 (6%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
+ L LY+T++ K+ P +GKVG+YVCG+T YD HIGHARV V+FDV+YR+L Y
Sbjct: 2 SDLHLYDTLTAKKRPFTPIEDGKVGLYVCGMTVYDYCHIGHARVMVSFDVIYRWLSRF-Y 60
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
+V YVRN TD+DDKII RA E GE +L+ R+ + H+D +L CL P+ EP+ +D++P
Sbjct: 61 QVNYVRNITDIDDKIIKRAGENGESIFTLTERFTKAMHEDADNLGCLRPTHEPKATDYIP 120
Query: 194 HIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
+++MIT + + AY+ D GDVY+ V+ F +YG+LS R+L D +AG RV K+NP
Sbjct: 121 QMLNMITTLQNKQLAYQGDSGDVYYKVENFADYGKLSKRRLADMQAGIRVDTADDKQNPF 180
Query: 253 DFALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHE 309
DF LWKSAKE EP W+SP+G GRPGWHIECSAMS LG +FDIHGGG DL FPHHE
Sbjct: 181 DFVLWKSAKESEPDETKWQSPFGQGRPGWHIECSAMSTCCLGDNFDIHGGGHDLQFPHHE 240
Query: 310 NEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGT 369
NEIAQS A + + W+H GFV +D EKMSKSL NFFTIR V++ +H +R F++ +
Sbjct: 241 NEIAQSEGATQKPYANNWLHVGFVNVDGEKMSKSLNNFFTIRDVLKDFHAEVIRFFMLSS 300
Query: 370 HYRSPINYSVVQLESAS---ERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKF 426
HYRSPIN+S L+ A R+++ + HD D I D + +
Sbjct: 301 HYRSPINFSDTALKEAHASLSRLYHALKLFHD--------------DEIIIDECVWQSDY 346
Query: 427 HNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTV 486
F +M DD +T L+ L + IN + L+ L K ++ +
Sbjct: 347 GQAFSRAMHDDFNTPKALSVLFQLVGEINKAFKNNE-------LDKSKHLAKILKTLAEP 399
Query: 487 LGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVG 546
L + G +E L +K+L L+E ++L +I+ RT A+ +K + +D IR +L A G
Sbjct: 400 LNIAQAGPNEFL----QKSLNADGLSETEILAKIDARTQAKIDKNFTLADQIRDELNAQG 455
Query: 547 IALMDSPVGTTWR 559
I L DS GT WR
Sbjct: 456 IELEDSRAGTMWR 468
>gi|417552874|ref|ZP_12203944.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-81]
gi|417561155|ref|ZP_12212034.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC137]
gi|421199231|ref|ZP_15656395.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC109]
gi|421456054|ref|ZP_15905397.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-123]
gi|421632844|ref|ZP_16073487.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-13]
gi|421805171|ref|ZP_16241064.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-694]
gi|395523737|gb|EJG11826.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC137]
gi|395565198|gb|EJG26846.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC109]
gi|400211152|gb|EJO42115.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-123]
gi|400393133|gb|EJP60179.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-81]
gi|408707563|gb|EKL52846.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-13]
gi|410409769|gb|EKP61693.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-694]
Length = 473
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/488 (44%), Positives = 304/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWPSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ AL S I +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSF-------IERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + + AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|104781222|ref|YP_607720.1| cysteinyl-tRNA synthetase [Pseudomonas entomophila L48]
gi|123079208|sp|Q1IBP9.1|SYC_PSEE4 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|95110209|emb|CAK14916.1| cysteinyl-tRNA synthetase [Pseudomonas entomophila L48]
Length = 460
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/487 (44%), Positives = 283/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E KP V MYVCG+T YD H+GH R V FD++ R+LR GY +
Sbjct: 2 LTIYNTLSKTKETFKPLDGNNVRMYVCGMTVYDYCHLGHGRSMVAFDLITRWLRKSGYAL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R + H+D L L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTARMIDAMHEDERRLSILKPDLEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ V K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRKKIEDLRIGARIEVGESKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEPFW+SPWGPGRPGWHIECS MS LG SFDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGAKPGEPFWDSPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFTIR V++ YHP +R L+ +HYRS
Sbjct: 242 SEAATGKPYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLVASHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L +P F F +M
Sbjct: 302 INYSEDSLRDSKGALERFYHALR----------------GLPRVAAKGGEAFVERFTVAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L D ++ IN L + +E+ A L +R + VLG++
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRES--------DVEAAAGLAGRLRELGDVLGVLQLDA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LR A + D + + L I+ R AR +K + +SD IR + A+G+ L D
Sbjct: 398 DEF---LRAGAEGKVDAAQVEAL--IQARLQARADKNWAESDRIRDQITAMGVVLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|302039377|ref|YP_003799699.1| cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
gi|300607441|emb|CBK43774.1| Cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
Length = 486
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/496 (43%), Positives = 299/496 (60%), Gaps = 24/496 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT+S +E +P V GKV MYVCGVT YD HIGHAR + FDVL RYL + G+ V
Sbjct: 2 LRLYNTLSGSKEPFEPLVPGKVRMYVCGVTVYDYCHIGHARSALVFDVLRRYLEYSGFVV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+ +NFTDVDDKII RA E G ++ Y +++DM L ++EPR ++H+ I
Sbjct: 62 EFAKNFTDVDDKIIKRAKEQGVSCEHVTTTYINAYYEDMEKLGVRRATLEPRATEHIAEI 121
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
+ ++ +L G AYRVDGDVYF VD++ YG+LS R ++D +AG RV VD RK++P DFA
Sbjct: 122 VRLVDTLLAKGMAYRVDGDVYFQVDRYAVYGRLSKRNVDDLQAGARVDVDERKRHPMDFA 181
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK +K GEP W+SPWG GRPGWHIECSAM+ +LG +FDIHGGGMDL+FPHHENEIAQS
Sbjct: 182 LWKGSKPGEPSWDSPWGQGRPGWHIECSAMAMRHLGETFDIHGGGMDLIFPHHENEIAQS 241
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVME------LYHPLALRLFLIGT 369
C A YW+HNGFV I+ EKMSKSLGNFFTIR++ + LR FL+ T
Sbjct: 242 CGATGKEFARYWVHNGFVQINQEKMSKSLGNFFTIREIFQKSEWPDTVTGEMLRYFLLTT 301
Query: 370 HYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHND 429
HYRSP+++S L+ A + Y L ++A + ++ +
Sbjct: 302 HYRSPLDFSDQSLKEAKNALNGFYDLFE------RLNESAPVHSPGDQSMQEAMVRTREA 355
Query: 430 FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGL 489
F+A+M DDL+T LAAL N L G MR + + R + VLGL
Sbjct: 356 FVAAMDDDLNTPNALAALQMLRGDTNKALEA--GLSGEMR----QMVRQEFRALGIVLGL 409
Query: 490 MSTGYSEVLLQLREKALKRAD-----LTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAA 544
+ T +Q ++ + A+ L+++ + ++ R A+++K Y+ +D +R +LA+
Sbjct: 410 LQTDTWRFKIQQQQPSSGGAEASTGTLSDEDIADKLAARLAAKRSKNYQLADQLRAELAS 469
Query: 545 VGIALMDSPVGTT-WR 559
GI + D GT+ W+
Sbjct: 470 HGITIEDRQDGTSRWK 485
>gi|170717373|ref|YP_001783468.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
gi|189082066|sp|B0UVH6.1|SYC_HAES2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|168825502|gb|ACA30873.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
Length = 459
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/485 (45%), Positives = 291/485 (60%), Gaps = 30/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR+LGYE+
Sbjct: 2 LKIFNTLTREKEVFKPISENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E ++D L+ L P EPR + H+ I
Sbjct: 62 TYVRNITDVDDKIIRRALENKETCEQLVDRMVVEMYKDFDALNVLRPDFEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ +++ G AY D GDV F V+ F EYG+LS + L +AG RV + KKNP DF
Sbjct: 122 IALVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLTQLQAGARVEISEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ +LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWNSPWGAGRPGWHIECSAMNCKHLGEHFDIHGGGADLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 242 SCCAHGNRYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ F F +M
Sbjct: 302 LNYSEENLDLAHGALERLYTALRGTDKSAVSFGG---------------ENFIAQFTEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T ++ L + + IN L + K + + LAA +R + ++LGL+
Sbjct: 347 NDDFNTPNAISVLFEMAREINRLKNEDK-----LLADGLAA---RLRELASILGLLDQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ + A + E I+ R AR+ K++ ++DA R +L +G+ L DS
Sbjct: 398 PEDFLQAGSDDAEIAKIEE-----LIKQRNDARQAKDWARADAARNELTTMGVILEDSSN 452
Query: 555 GTTWR 559
GT WR
Sbjct: 453 GTMWR 457
>gi|125974555|ref|YP_001038465.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|256004086|ref|ZP_05429071.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|281419079|ref|ZP_06250096.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
gi|385779993|ref|YP_005689158.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
gi|419721338|ref|ZP_14248502.1| cysteinyl-tRNA synthetase [Clostridium thermocellum AD2]
gi|419726884|ref|ZP_14253904.1| cysteinyl-tRNA synthetase [Clostridium thermocellum YS]
gi|187629806|sp|A3DH43.1|SYC_CLOTH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|125714780|gb|ABN53272.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|255992009|gb|EEU02106.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|281407228|gb|EFB37489.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
gi|316941673|gb|ADU75707.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
gi|380769849|gb|EIC03749.1| cysteinyl-tRNA synthetase [Clostridium thermocellum YS]
gi|380782508|gb|EIC12142.1| cysteinyl-tRNA synthetase [Clostridium thermocellum AD2]
Length = 468
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/481 (43%), Positives = 288/481 (59%), Gaps = 19/481 (3%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++RK+E P E +V MY CG T Y+ HIG+AR ++ FD L RYL + GY V +
Sbjct: 3 LYNTLTRKKEEFHPIDEKEVKMYSCGPTVYNYFHIGNARPFIIFDTLRRYLEYKGYNVKF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDK+I RANE G L+ ++ E+ D L +V PR ++++ II+
Sbjct: 63 VQNFTDIDDKMIKRANEEGITVKELADKFINEYFVDAKGLGIKEATVHPRATENIDAIIE 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
MI ++ + GFAY VDGDVYFS KF EYG+LS + LED G R+ VD RKK+P DFALW
Sbjct: 123 MIKKLEEKGFAYNVDGDVYFSARKFTEYGKLSHQSLEDLELGARIDVDERKKDPMDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ K GEP W+SPWG GRPGWHIECSAM+ YLG + DIH GG DLVFPHHENEIAQS A
Sbjct: 183 KAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLVFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A +W+HNGF+ +D EKM+KS GNFFT+R + + + +R F++ HYRSPIN+
Sbjct: 243 ANGKPFARFWLHNGFINVDGEKMAKSKGNFFTVRDIAKTFDYEVIRFFMLSAHYRSPINF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S LE A + IY L + E A + DS + + F+ +M DD
Sbjct: 303 SAELLEQAKNGLERIYNCLDNLEYLKEHAQAEKITDS-ERELQNRLLGIKAKFIEAMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
++T +AA+ D +K +N ++ + + SL+ I+ + VLG+ +V
Sbjct: 362 INTADAIAAIFDIVKEVNTNINATSNSSKEIIDFSLS----LIKELGGVLGIAQKSRQKV 417
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
L + ++ + IE R ARK K+++ +D IR L +GI L D+P G
Sbjct: 418 L--------------DKEIEELIERRQKARKEKDWKTADEIRDKLKEMGIILEDTPQGVK 463
Query: 558 W 558
W
Sbjct: 464 W 464
>gi|331082990|ref|ZP_08332109.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
gi|330399727|gb|EGG79388.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 468
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/491 (43%), Positives = 298/491 (60%), Gaps = 32/491 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+++K+E P EGKV MYVCG T Y+ HIG+AR + FD + RY+ + GYEV Y
Sbjct: 3 IYNTLTKKKEEFIPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYMEYKGYEVNY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDKIIA+A E G +S RY +E +DM D++ P + P + + +ID
Sbjct: 63 VSNFTDVDDKIIAKAVEEGVSAEEISSRYIKECKKDMADMNVKPATTHPLATQEIDGMID 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGER---VAVDSRKKNPADF 254
MI ++D GFAY V+G VYF V F EYG+LS + LED ++G R V+ +++K++P DF
Sbjct: 123 MIQTLMDKGFAYEVNGTVYFRVKNFKEYGKLSHKNLEDLQSGFRSLQVSGENQKEDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK KEGEPFW SPW GRPGWHIECS MS YLG DIH GG DLVFPHHENEIAQ
Sbjct: 183 VLWKPKKEGEPFWVSPWSEGRPGWHIECSVMSKKYLGEEIDIHAGGEDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHIS-YWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
S CN + YW+HN F+ ID+ KMSKSLGNFFT+R++ E Y LR F++ HYRS
Sbjct: 243 S-ECCNGKQFARYWMHNAFLNIDNRKMSKSLGNFFTVREIGEKYDLQVLRFFMLNAHYRS 301
Query: 374 PINYSVVQLESAS---ERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDF 430
P+N+S +E++ ERI + L + + + ++ + + + K+ N
Sbjct: 302 PLNFSAELMEASKNSLERIITCVEQLKHLLETAEKTEMTETEKALEVEVLEYVKKYEN-- 359
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
SM DD +T +AA+ + +K N T+ + + L TI ++ VLGL+
Sbjct: 360 --SMEDDFNTADAIAAIFELVKFAN----TKANENSTAAF--VQYLFDTIVHLSDVLGLI 411
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
K A++ ++++ + IE+R +ARK K ++++D IR +LAA+GI L
Sbjct: 412 VN--------------KEAEILDEEIEKLIEERQMARKEKNFKRADEIRDELAAMGIILK 457
Query: 551 DSPVGTTWRPA 561
D+ G W+ A
Sbjct: 458 DTREGVQWKRA 468
>gi|260589563|ref|ZP_05855476.1| cysteine--tRNA ligase [Blautia hansenii DSM 20583]
gi|260540131|gb|EEX20700.1| cysteine--tRNA ligase [Blautia hansenii DSM 20583]
Length = 468
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/491 (43%), Positives = 298/491 (60%), Gaps = 32/491 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+++K+E P EGKV MYVCG T Y+ HIG+AR + FD + RY+ + GYEV Y
Sbjct: 3 IYNTLTKKKEEFIPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYMEYKGYEVNY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDKIIA+A E G +S RY +E +DM D++ P + P + + +ID
Sbjct: 63 VSNFTDVDDKIIAKAVEEGVSAEEISSRYIKECKKDMADMNVKPATTHPLATQEIDGMID 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGER---VAVDSRKKNPADF 254
MI ++D GFAY V+G VYF V F EYG+LS + LED ++G R V+ +++K++P DF
Sbjct: 123 MIQTLMDKGFAYEVNGTVYFRVKNFKEYGKLSHKNLEDLQSGFRSLQVSGENQKEDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK KEGEPFW SPW GRPGWHIECS MS YLG DIH GG DLVFPHHENEIAQ
Sbjct: 183 VLWKPKKEGEPFWVSPWSEGRPGWHIECSVMSKKYLGEEIDIHAGGEDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHIS-YWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
S CN + YW+HN F+ ID+ KMSKSLGNFFT+R++ E Y LR F++ HYRS
Sbjct: 243 S-ECCNGKQFARYWMHNAFLNIDNRKMSKSLGNFFTVREIGEKYDLQVLRFFMLNAHYRS 301
Query: 374 PINYSVVQLESAS---ERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDF 430
P+N+S +E++ ERI + L + + A + ++ + + + K+ N
Sbjct: 302 PLNFSAELMEASKNSLERIITCVEQLKHLLETAEKTEMTAEEKALEAEVLEYVKKYEN-- 359
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
SM DD +T +AA+ + +K N T+ + + L TI ++ VLGL+
Sbjct: 360 --SMEDDFNTADAIAAIFELVKFAN----TKANENSTAAF--VQYLFDTIVHLSDVLGLI 411
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
K A++ ++++ + IE+R +ARK K ++++D IR +LA +GI L
Sbjct: 412 VN--------------KEAEILDEEIEKLIEERQMARKEKNFKRADEIRDELATMGIILK 457
Query: 551 DSPVGTTWRPA 561
D+ G W+ A
Sbjct: 458 DTREGVQWKRA 468
>gi|422336724|ref|ZP_16417697.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
gi|353346036|gb|EHB90323.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
Length = 459
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/489 (44%), Positives = 292/489 (59%), Gaps = 38/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NT++R++E+ KP GK+GMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY++
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 TAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H+G + +D EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 242 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +K+ D+ F +M
Sbjct: 302 LNYSEENLNLAHGALERLYTALRGTDKSAVAFGGENFVDA---------------FRDAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAM-RLESLAALEKTIRNVLTVLGLMSTG 493
DD +T L+ L + + +N L K + M + LAA +R + +LG
Sbjct: 347 DDDFNTPNALSVLFEMARELNKL------KTEDMAKANGLAA---RLRELAGILG----- 392
Query: 494 YSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
LLQL + +A +D+V + I+ R AR K++ +DA R L +GI L
Sbjct: 393 ----LLQLDPEQFLQAGSDDDEVAKIEGLIKQRNEARAAKDWPAADAARNALTEMGIVLE 448
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 449 DGPNGTTWR 457
>gi|225851008|ref|YP_002731242.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
gi|254781689|sp|C0QRE6.1|SYC_PERMH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|225645417|gb|ACO03603.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
Length = 487
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/489 (43%), Positives = 301/489 (61%), Gaps = 11/489 (2%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++ K+E P G+V +Y CGVT YD++H+GH R + FDV+ RYLR+LGY V
Sbjct: 3 LKVYNTLTGKKEEFVPIKPGEVKIYTCGVTVYDVNHVGHGRSLIVFDVIRRYLRYLGYNV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRNFTDVDDKII RA ++ RY +E+ QD + P VEPRV+ H+P I
Sbjct: 63 YFVRNFTDVDDKIINRAKNECLPFTVIADRYIKEYFQDAENFRIEPADVEPRVTTHIPDI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
ID I +++D G+AY V+GDVYFSV KF EYG+LS R +++ AG RV +K++P DFA
Sbjct: 123 IDFIQRLIDKGYAYEVEGDVYFSVRKFKEYGKLSKRSVDELIAGARVEPGEKKRDPLDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK++K GEP W+SPWG GRPGWH EC AM +LG + DIHGGG+DL FPHHENE+AQ+
Sbjct: 183 LWKASKAGEPAWDSPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPHHENELAQA 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A + YWIHNG VT++ +KMSKSLGN+ T++++ Y P LRL ++ HYRSP+
Sbjct: 243 EALSDKPFARYWIHNGLVTVNGQKMSKSLGNYITLKEIYSKYDPDVLRLLVLSVHYRSPL 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
++S ++E + Y+ L +L I K F A+MS
Sbjct: 303 DFSWEKMEETKK----AYERLKGAIDEYEILKKLPENPDFDEHLYDEIAKAEQGFYAAMS 358
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T LA+L ++ +N +L + K + ++L + K +VL +G G
Sbjct: 359 DDFNTPEALASLFTLVREMN-ILRDKAVKSGGISKKALESY-KEASDVLHSIGKEIFGLF 416
Query: 496 EVL---LQLREKALKRADLTEDQVLQR--IEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
+ L +++ E +++A+ D L IE R ARK K++E +D IR+ L+ +GI +
Sbjct: 417 DSLQPCIEVEEIKVEKAEEKIDTQLVEALIEVRNKARKEKQFEIADYIREKLSQLGIVIE 476
Query: 551 DSPVGTTWR 559
D+PVGT W+
Sbjct: 477 DTPVGTKWK 485
>gi|421694240|ref|ZP_16133865.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-692]
gi|404568242|gb|EKA73346.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-692]
Length = 473
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/488 (44%), Positives = 304/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S + +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + ++AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|399910862|ref|ZP_10779176.1| cysteinyl-tRNA synthetase [Halomonas sp. KM-1]
Length = 476
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/488 (44%), Positives = 296/488 (60%), Gaps = 24/488 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
+ +YNT++R++E P GKV MYVCG+T YD H+GHARV V FDV+ RYLR ++V
Sbjct: 1 MQIYNTLTRRKEPFTPIEPGKVRMYVCGMTVYDYCHLGHARVMVAFDVVTRYLRWRDFDV 60
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKI+ RA+E GE SL+ R H+D L L P EPR + H+ I
Sbjct: 61 TYVRNITDIDDKILKRADENGETIASLTERMIAAMHEDEARLGVLRPDREPRATGHVSEI 120
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ ++D G+ Y +GDVY+ V KF YG+L+ R L++ RAG RV VD K++P DF
Sbjct: 121 IAMVETLIDKGYGYPAANGDVYYRVRKFEGYGKLNNRNLDEMRAGARVDVDEHKEDPLDF 180
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GE W SPWG GRPGWHIECSAMS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 181 VLWKAAKPGEASWPSPWGEGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEIAQ 240
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +++ W+H G V ++ EKMSKSLGNFFTIR+V+E++ P +R L+ +HYRSP
Sbjct: 241 SEAATGKPYVNTWMHAGAVRVNQEKMSKSLGNFFTIREVLEVHDPEVVRYLLVASHYRSP 300
Query: 375 INYSVVQLESASERIFYIYQTLHDC----EKALSLLDAAALKDSIPPDTVTSINKFHNDF 430
INY+ L A + + Y L + ++ AL ++ D F + F
Sbjct: 301 INYAPESLADARKSLERFYNALDGVGVGGKDEKTIQKERALAKAVYGD-------FEDRF 353
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
+ +M DD +T L+ L D + +N + KK+A +L L ++ + VLGL+
Sbjct: 354 IVAMDDDFNTAEALSVLFDLARELN------RAKKEATKLAP--GLAHELKRLGGVLGLL 405
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
E L+ L L+E ++ +I R A+K +++ +D IR +LA +GI L
Sbjct: 406 QQ-QPEAFLKGGAGELP---LSESEIEAKIVARAEAKKARDFAAADGIRDELATLGIVLK 461
Query: 551 DSPVGTTW 558
DS GT+W
Sbjct: 462 DSREGTSW 469
>gi|261855684|ref|YP_003262967.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
gi|261836153|gb|ACX95920.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
Length = 454
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/488 (45%), Positives = 289/488 (59%), Gaps = 41/488 (8%)
Query: 76 LWLYNTMSR-KRELV--KPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLG 132
L +Y++ +R KRE V KPK VGMYVCG+T YD HIGHARV V FD++ RY R G
Sbjct: 2 LVIYDSHARAKREFVPIKPKT---VGMYVCGMTVYDRCHIGHARVMVVFDMVVRYFRASG 58
Query: 133 YEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHM 192
YEV YVRN TD+DDKIIARA E E SL+ RY E H D L CL P+ EPR ++ +
Sbjct: 59 YEVHYVRNITDIDDKIIARAAENKESIRSLTERYIEAMHDDAAALGCLLPTAEPRATESV 118
Query: 193 PHIIDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNP 251
++ MI +++ G AYR +GDVYF V F YG+LS R +D RAG RV +D K +P
Sbjct: 119 GDMVAMIESLIERGHAYRAANGDVYFDVSTFDRYGELSNRNPDDLRAGARVEIDEAKTDP 178
Query: 252 ADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
DF LWK+ K G+P W++P+GPGRPGWHIECSAMS LG +FDIHGGG DL FPHHENE
Sbjct: 179 LDFVLWKAEKPGDPSWDAPFGPGRPGWHIECSAMSTRALGATFDIHGGGQDLQFPHHENE 238
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + +++YW+HNGFV I+ EKMSKSLGNFFT+ +VM YHP +RLF++ +HY
Sbjct: 239 IAQSECATGHHYVNYWMHNGFVRINEEKMSKSLGNFFTVAEVMRQYHPEVIRLFVLSSHY 298
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RSP+NYS L++A + Y + D P T + F
Sbjct: 299 RSPLNYSDQNLDAARASLTRWYTAIKDA-----------------PQNGTPNPEVMARFR 341
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
M DD +T LA + + + +N + K A TI+ + +L L
Sbjct: 342 GVMDDDFNTPEALAIVFEQISELN------RSKD--------ANCAATIKAIGEILNL-- 385
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
G + LR L+++ + Q+I +R AR NK++ SD IR +L A GI L D
Sbjct: 386 -GQHDPESFLRWAPSSSDQLSDEAIEQKIAERASARANKDFAASDRIRDELQAAGIVLED 444
Query: 552 SPVGTTWR 559
TTWR
Sbjct: 445 KAGQTTWR 452
>gi|406928420|gb|EKD64226.1| hypothetical protein ACD_51C00046G0015 [uncultured bacterium]
Length = 462
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/489 (43%), Positives = 299/489 (61%), Gaps = 36/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L + NT+S K+E KP + VGMYVCG T YD H+GH R V FD++ +YL++ GY+V
Sbjct: 3 LKVKNTLSGKKEEFKPIKDNHVGMYVCGPTVYDFGHLGHGRSAVVFDIIRKYLKYKGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YV N+TD+DDK+I RAN+ G L+ + E+ +D L P +P+ + ++P +
Sbjct: 63 TYVSNYTDIDDKMINRANKEGITVKQLAEKIIPEYQEDYGQLKIDKPDTQPKATQYIPQM 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I++I ++++ G+AY ++ VY+ V+KF YG+LSG+ ++ +AG R+ D +K++P DF
Sbjct: 123 IELIKKLIEKGYAYELEDGVYYEVEKFAHYGKLSGQNQDELKAGARIEKDDKKRHPHDFV 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK AK EP W SPWG GRPGWHIECSAMS LG +FDIHGGGMDL+FPHHE+EIAQS
Sbjct: 183 LWKKAKPDEPSWPSPWGEGRPGWHIECSAMSMDLLGETFDIHGGGMDLIFPHHEDEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA S++ YW+HNGF+TI++EKMSKSLGNFFT++++ Y+P +R +IGTHYRSPI
Sbjct: 243 EAATGKSYVKYWLHNGFITINNEKMSKSLGNFFTLKEIFAKYNPNTVRYMIIGTHYRSPI 302
Query: 376 NYS---VVQLESASERI--FYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDF 430
N+S + Q E+A RI F I + E + S + ALK ++ DF
Sbjct: 303 NFSHELLDQSENALSRIKDFLINLKNYKNETSKS---SPALKKTLENAI--------KDF 351
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
M DD T L AL + +K +N L+ + G E + K I +VL +L +
Sbjct: 352 EKRMDDDFDTAGGLGALYNLIKEVNILM--KNGDLAETDKEKIETTLKKIDSVLCILPEV 409
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
T + +V I+ RT ARKNK++ +D IRKDL + GI L
Sbjct: 410 ETSVNP------------------EVENAIKARTDARKNKDFALADKIRKDLESQGIILE 451
Query: 551 DSPVGTTWR 559
D+P GT W+
Sbjct: 452 DTPQGTIWK 460
>gi|170721588|ref|YP_001749276.1| cysteinyl-tRNA synthetase [Pseudomonas putida W619]
gi|229558806|sp|B1J805.1|SYC_PSEPW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169759591|gb|ACA72907.1| cysteinyl-tRNA synthetase [Pseudomonas putida W619]
Length = 460
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/487 (44%), Positives = 286/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R + H+D L+ L P EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRANENGETFDALTARMIDAMHEDERRLNILKPDQEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP+W+SPWGPGRPGWHIECS MS LG SFDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPYWDSPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFTIR V+++YHP +R L+ +HYRS
Sbjct: 242 SEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDVYHPEVVRYLLVASHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P +F F +M
Sbjct: 302 INYSEDSLRDAKGALERFYHALR----------------GLPRVAAKGGEEFVERFSVAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L D ++ IN L + ++ A L +R + VLG++
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDSDP--------DAAAGLAGRLRELGDVLGVLQLEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LR A + D E + L I+ R AR +K + +SD IR L A+G+ L DS
Sbjct: 398 DDF---LRAGAEGKVDAAEVEAL--IQARLQARADKNWAESDRIRDQLTAMGVVLEDSKG 452
Query: 555 GTTWRPA 561
TTWR A
Sbjct: 453 ATTWRLA 459
>gi|383309904|ref|YP_005362714.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. HN06]
gi|380871176|gb|AFF23543.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. HN06]
Length = 459
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/490 (44%), Positives = 294/490 (60%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP KVGMYVCG+T YDL H+GH R +V FDV+ RYLR+LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L + E H+D L+ L P VEPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHRDFDALNVLRPDVEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +++ AY +GDV F V+ F EYG+LS + LE +AG RV + + KKNP DF
Sbjct: 122 IAMIEKLIARQHAYVSANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YWIH+G + +D EKMSKSLGNFFT+R+V+ LY ++R FL+ HYRS
Sbjct: 242 SCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLE---SASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
+NYS L SA ER++ AL+ + P T + F
Sbjct: 302 LNYSEENLNLAHSALERLY------------------TALRGTDPTAVATEGQNYLAAFR 343
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M DD +T ++ L + + IN L + ++ +LAA +R + +LGL
Sbjct: 344 EAMDDDFNTPKAISVLFEIAREINKL-----KNEDILKANALAA---RLRELAGILGL-- 393
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQR--IEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
L Q E+ L+ ++ L I+ R AR K++ +DA R LA +G+ L
Sbjct: 394 ------LYQDPEQFLQSGSDNDEVALIEALIKQRNDARAAKDWASADAARNKLAEMGVVL 447
Query: 550 MDSPVGTTWR 559
D+ GTTWR
Sbjct: 448 EDNVNGTTWR 457
>gi|409422162|ref|ZP_11259271.1| cysteinyl-tRNA ligase [Pseudomonas sp. HYS]
Length = 460
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/487 (44%), Positives = 287/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR+ GY++
Sbjct: 2 LTIYNTLSKTKEVFKPLEGNKVRMYVCGMTVYDFCHLGHGRSMVAFDLVTRWLRYSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RAN+ GE +L+ R + H+D L+ LPP EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRANDNGESFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWGPGRPGWHIECS MS LG SFDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGNDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFTIR V++ YHP +R L+ +HYRS
Sbjct: 242 SEAATGKQYANSWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLVSSHYRSS 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L +P ++ F +M
Sbjct: 302 INYSEDSLRESKGALERFYHALR----------------GLPRVAAEGGEEYVERFTVAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L D ++ IN L R+ QA A L +R + +LG++
Sbjct: 346 NDDFGTPEACAVLFDLVREINRL---RESDPQAA-----AGLAGRLRELGDLLGVLQLDA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LR A + D E + L I+ R AR +K + +SD IR L A+G+ L D
Sbjct: 398 DDF---LRAGAEGKVDAAEVEAL--IQARLQARADKNWAESDRIRDQLTAMGVVLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|313667586|ref|YP_004047870.1| cysteinyl-trna synthetase [Neisseria lactamica 020-06]
gi|313005048|emb|CBN86480.1| cysteinyl-trna synthetase (ec 6.1.1.16) (cysteine--trna ligase)
(cysrs) [Neisseria lactamica 020-06]
Length = 473
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/499 (43%), Positives = 295/499 (59%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 LYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G++FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGKGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE-- 351
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ + + F +M+DD T +A L + +N + A RL++L
Sbjct: 352 -AGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKT----NNAQLAGRLKALGG----- 401
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 402 -----IIGLLQRDPTEFL----QGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDTAGGTTWR 471
>gi|208780370|ref|ZP_03247711.1| cysteinyl-tRNA synthetase [Francisella novicida FTG]
gi|208743738|gb|EDZ90041.1| cysteinyl-tRNA synthetase [Francisella novicida FTG]
Length = 464
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/486 (44%), Positives = 286/486 (58%), Gaps = 31/486 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
YN++S ++E KP K+ MY CGVT YD HIGHAR Y+ FDV+ RY + GY+V
Sbjct: 8 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFNYRGYDVTL 67
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L R + H L+ L PS EPR ++ +P ++
Sbjct: 68 VRNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVA 127
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ G+AY+ +GDV++ V KF +YG+LS + LE + G RV V K+NP DF L
Sbjct: 128 MIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKENPMDFVL 187
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AKEGEP W SPWG GRPGWHIECSAMS LG +FDIH GG DL FPHHENEIAQS
Sbjct: 188 WKMAKEGEPAWNSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHHENEIAQSE 247
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +YW+H+G V +++EKMSKSL NFFTI +V+E YHP +R FL T YRS IN
Sbjct: 248 ACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFLASTVYRSEIN 307
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS LE+A + ++ L D E ++ ++P D +++ F+ +M +
Sbjct: 308 YSKENLENAKASVERLFNALRDIE---------PIEVNLPDDA----SEYEEKFIKAMDN 354
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L K IN L T K K + +R + VLG++ T E
Sbjct: 355 DFNTPEALAVLFSLAKEINTLKTTNKYKA--------SGYAYLLRKLCDVLGILFTDIEE 406
Query: 497 VLLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
K+ D + +++ I +RT A+K+K Y ++D IR L GI L DS G
Sbjct: 407 Y--------FKQGDGVDASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSATG 458
Query: 556 TTWRPA 561
TTW+
Sbjct: 459 TTWKKG 464
>gi|416214986|ref|ZP_11623197.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
gi|325143495|gb|EGC65816.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
Length = 473
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/499 (43%), Positives = 294/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + AAA D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTP-------AAAF------DLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAQLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPTEFL----QGSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|423094541|ref|ZP_17082337.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Q2-87]
gi|397886248|gb|EJL02731.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Q2-87]
Length = 460
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/487 (44%), Positives = 291/487 (59%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD HIGH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD++DKII RA E GE +L+ R + H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIEDKIINRARENGEPYDALTERMIQAMHEDEARLNILKPDLEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 LSMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W+SPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGAKPGEPSWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V++ YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L K L ++PP F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHAL----KGLP---------AVPP---AGGEGFVARFTEVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L + ++ IN L + L + A L ++ + +VLG++
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRES--------DLNAAAGLAARLKELASVLGVLQLEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L+ A R D E L I+ R AR NK++ +SD IR L A+G+ L D
Sbjct: 398 DDF---LQAGAEGRVDAAEVDAL--IQARLTARTNKDWAESDRIRDQLTAMGVVLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|421555761|ref|ZP_16001686.1| cysteine--tRNA ligase [Neisseria meningitidis 98008]
gi|402328737|gb|EJU64103.1| cysteine--tRNA ligase [Neisseria meningitidis 98008]
Length = 473
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/499 (43%), Positives = 294/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + AAA D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTP-------AAAF------DLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAQLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPTEFL----QGSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|323499496|ref|ZP_08104466.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
gi|323315369|gb|EGA68410.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
Length = 460
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/489 (44%), Positives = 292/489 (59%), Gaps = 37/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RANE GE SL+ R E H D L+ P VEPR ++++ I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEYIKEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ GFAY D GDV F + K+ +YG+LS + L+ +AG RV ++S K++ DF
Sbjct: 122 IELVETLIERGFAYVADNGDVMFEIAKYDDYGKLSRQDLDQLQAGARVEIESAKRSSLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHGTDYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L L S+P + F +M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLR------------GLDISVP---AAGGEDYVKRFTDAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN R + M +L AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREIN-----RLKTEDVMAASALGAL---MRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L +A + D D + IE R +R K++ +D R L +GI L
Sbjct: 393 ---ILHQDPEAFLKGDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLE 449
Query: 551 DSPVGTTWR 559
D GTTWR
Sbjct: 450 DGSEGTTWR 458
>gi|363891501|ref|ZP_09318680.1| cysteine-tRNA ligase [Eubacteriaceae bacterium CM2]
gi|361965558|gb|EHL18540.1| cysteine-tRNA ligase [Eubacteriaceae bacterium CM2]
Length = 466
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/481 (42%), Positives = 296/481 (61%), Gaps = 20/481 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNTMS ++E K +GKV MY CG T Y+ HIG+AR ++ FD L YL ++GYEV +
Sbjct: 3 IYNTMSSQKEEFKELEKGKVKMYSCGPTVYNYFHIGNARPFIVFDTLRNYLEYIGYEVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII +ANE G PI L+ +Y EE+ +D + +V PRV++++ IID
Sbjct: 63 VQNFTDVDDKIIIKANEEGITPIQLADKYIEEYFKDAKAIGIRKATVHPRVTENIKEIID 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++D GFAY + DVYF V KF EYG+LS + ++D +G R+ ++ K+ P DFALW
Sbjct: 123 FIQDLIDKGFAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARIEINDEKRAPIDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K KEGE W+SPWG GRPGWHIECS MS YLG S DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KGKKEGEIGWDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+++ +YW+HNG++ +D+EKMSKSLGNFFT+R V++ + LR F++ HYRSPINY
Sbjct: 243 RSSHTFANYWMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTLRFFMLSAHYRSPINY 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L A + I ++ L+ +D + + + V + + +F+ M+DD
Sbjct: 303 SKDMLNQAKNSLERIKNCKNNLNFILTKIDKTDMSEQ-EKENVVYLQECKTNFIDKMNDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
L+T + A+ D +K N + S+ + + ++ L +L + TG +
Sbjct: 362 LNTADAITAIFDLVKFANTNV-------------SIDSSKVFVQQTLDMLNEL-TGVLNI 407
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
+ ++ + A + E IE R +A+K+K++ K+D IR +L +GI + D+ G
Sbjct: 408 AMDKTDEDVDVAKIEE-----LIEQRNIAKKSKDFAKADEIRDELKQMGIEIKDTRQGVQ 462
Query: 558 W 558
W
Sbjct: 463 W 463
>gi|262404192|ref|ZP_06080747.1| cysteinyl-tRNA synthetase [Vibrio sp. RC586]
gi|262349224|gb|EEY98362.1| cysteinyl-tRNA synthetase [Vibrio sp. RC586]
Length = 459
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/485 (44%), Positives = 296/485 (61%), Gaps = 30/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP V GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E E SL+ R +E + D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENSETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY D GDV F V K+ EYG+LS + L+ +AG RV V++ K++P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLDQLQAGARVDVEAAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETIRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L L ++P ++ F A+M
Sbjct: 302 LNYSEENLNQARASLERLYNALR------------GLDRTVP---AAGGEEYLTRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L ++ L + +AL + + V+G++ Y
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KSEDLTNASALGSLMCELADVIGIL---Y 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E + A D +Q+ I+ R +R K++ +D R L +GI L D P
Sbjct: 396 QEPEAFFQGGA---EDEEAEQIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLEDGPN 452
Query: 555 GTTWR 559
GTTWR
Sbjct: 453 GTTWR 457
>gi|417546818|ref|ZP_12197904.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC032]
gi|421656805|ref|ZP_16097102.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-72]
gi|421664669|ref|ZP_16104805.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC110]
gi|421665433|ref|ZP_16105546.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC087]
gi|421672803|ref|ZP_16112757.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC099]
gi|400384706|gb|EJP43384.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC032]
gi|408503798|gb|EKK05551.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-72]
gi|408711840|gb|EKL57032.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC110]
gi|410378497|gb|EKP31115.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC099]
gi|410390191|gb|EKP42588.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC087]
Length = 473
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/488 (44%), Positives = 303/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S I +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSF-------IERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + + AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|435852952|ref|YP_007314271.1| cysteinyl-tRNA synthetase [Halobacteroides halobius DSM 5150]
gi|433669363|gb|AGB40178.1| cysteinyl-tRNA synthetase [Halobacteroides halobius DSM 5150]
Length = 476
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/486 (42%), Positives = 297/486 (61%), Gaps = 16/486 (3%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+SR++E KP + KV MY CG T YD HIG+AR ++ D++ RYL + GY+V
Sbjct: 3 LKIYNTLSRQKEEFKPLEKNKVKMYSCGPTVYDYFHIGNARAFIVPDIIKRYLEYQGYQV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V NFTD+DDK+I RANE G L+ + E +++D L+ V PR ++H+ +
Sbjct: 63 KHVLNFTDIDDKMIKRANEEGITVSELANEFIEAYYKDTAALNIKEADVYPRATEHIDEM 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I++I ++D G+AY +GDVYF VDKF +YG+LS +K+ED +AG RV V++RK++P DF
Sbjct: 123 IELIKDLIDKGYAYESNGDVYFRVDKFSDYGKLSNKKIEDLQAGARVEVNNRKESPIDFV 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK +K+GEP W+SPWG GRPGWHIECS MS YLG FDIH GG+DL FPHHENE+AQS
Sbjct: 183 LWKKSKDGEPAWDSPWGAGRPGWHIECSVMSTKYLGAKFDIHTGGVDLTFPHHENEVAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A C N + YW+HNG++ ID EKMSKSLGNFFT R+++E Y P +R FLI HYRSPI
Sbjct: 243 EAHCGNQVVKYWLHNGYINIDGEKMSKSLGNFFTTREILEEYSPAVVRFFLISKHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV-TSINKFHNDFLASM 434
N+S LE A + + T+ +K LL ++ + + F+ +M
Sbjct: 303 NFSDQALEEAKAGLERLENTV---DKLDHLLKQEPIEGELNGSHIKKVCKSKKEKFITAM 359
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLT-VLGLMSTG 493
+DD +T + AL + + +N + + A ESL + + T VLG+++
Sbjct: 360 NDDFNTALATGALYELARELNRFISKDDFELTADVKESLQLAKDLFAELATDVLGILT-- 417
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E+ + L V ++ R R +EY+ +D +R +LA + I + D+P
Sbjct: 418 ---------EREVANQGLVGPLVELLLDLREDLRTKQEYQLADKVRDELAELDIEVKDTP 468
Query: 554 VGTTWR 559
GT W+
Sbjct: 469 QGTEWK 474
>gi|443470479|ref|ZP_21060579.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|443473065|ref|ZP_21063090.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|442900156|gb|ELS26408.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|442903628|gb|ELS28919.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
Length = 462
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/487 (45%), Positives = 281/487 (57%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E +P V MYVCG+T YD HIGHARV V FDV+ R+LR GY+V
Sbjct: 4 LSIYNTLTKAKEAFQPLEGNSVRMYVCGMTVYDYCHIGHARVMVAFDVVTRWLRERGYDV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE L R H+D L L P +EPR + H+ +
Sbjct: 64 TYVRNITDIDDKIIRRAQENGEPFEVLVDRMIAAMHEDEARLSVLRPDIEPRATGHIAGM 123
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+MI ++D GFAY +GDVY+ V +F YG+LS R++++ + G R+ VD K++P DF
Sbjct: 124 HEMIQTLIDKGFAYAPGNGDVYYRVGRFEGYGKLSRRRIDELKIGARIEVDESKEDPLDF 183
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP WESPWGPGRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 184 VLWKGAKPGEPSWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 243
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 244 SEAATGKLYAKAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSP 303
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F A+M
Sbjct: 304 INYSEESLKEAKGALERFYNGLK----------------GLPAVAPAGGEAFVARFGAAM 347
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L + ++ +N L LAA K++ VL VL L +
Sbjct: 348 DDDFNSPEACAVLFEMIREVNRLREV-----DVQVAAGLAAQLKSMAAVLGVLQLEPDAF 402
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D E L I+ R AR K + +SD IR L A+G+ L D
Sbjct: 403 ------LQAGAAGKVDAAEVDAL--IQARLAARAEKNWAESDRIRDRLTAMGVVLEDGKG 454
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 455 GTTWRLA 461
>gi|416165303|ref|ZP_11607427.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
gi|433474412|ref|ZP_20431764.1| cysteine--tRNA ligase [Neisseria meningitidis 97021]
gi|433482842|ref|ZP_20440092.1| cysteine--tRNA ligase [Neisseria meningitidis 2006087]
gi|433484856|ref|ZP_20442070.1| cysteine--tRNA ligase [Neisseria meningitidis 2002038]
gi|433487087|ref|ZP_20444274.1| cysteine--tRNA ligase [Neisseria meningitidis 97014]
gi|433537689|ref|ZP_20494180.1| cysteine--tRNA ligase [Neisseria meningitidis 77221]
gi|325127358|gb|EGC50293.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
gi|432207068|gb|ELK63063.1| cysteine--tRNA ligase [Neisseria meningitidis 97021]
gi|432213680|gb|ELK69591.1| cysteine--tRNA ligase [Neisseria meningitidis 2006087]
gi|432219093|gb|ELK74941.1| cysteine--tRNA ligase [Neisseria meningitidis 2002038]
gi|432220072|gb|ELK75899.1| cysteine--tRNA ligase [Neisseria meningitidis 97014]
gi|432270438|gb|ELL25576.1| cysteine--tRNA ligase [Neisseria meningitidis 77221]
Length = 473
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/499 (43%), Positives = 294/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + AAA D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTP-------AAAF------DLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAQLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPTEFL----QGSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|445492789|ref|ZP_21460635.1| cysteine--tRNA ligase [Acinetobacter baumannii AA-014]
gi|444762993|gb|ELW87339.1| cysteine--tRNA ligase [Acinetobacter baumannii AA-014]
Length = 473
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/488 (44%), Positives = 303/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIEQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGSAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S + +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + + AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|71280239|ref|YP_270455.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
gi|109894893|sp|Q47XL5.1|SYC_COLP3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71145979|gb|AAZ26452.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
Length = 469
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/500 (45%), Positives = 278/500 (55%), Gaps = 46/500 (9%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+SR++E P GKVG+YVCG T YDL HIGH R Y++FD + RYLR GY+V
Sbjct: 2 LQIYNTLSRQKETFTPINAGKVGLYVCGCTVYDLCHIGHGRTYISFDNIARYLRFSGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDV+DKII RANE E +L+ R HQD L+ P +EPRV+ HM I
Sbjct: 62 NYVRNITDVEDKIINRANENNETTEALTERTIAAMHQDFDSLNMARPDLEPRVTTHMNEI 121
Query: 196 IDMITQILDNGFAYRV--------DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSR 247
I MI ++ AY GDV F V + +YG+LSG+ LE ++G RV VD
Sbjct: 122 IAMIETLVTKEHAYVAGANAASTGQGDVLFDVSSYNDYGKLSGQNLEQLQSGSRVEVDQN 181
Query: 248 KKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPH 307
K NP DF LWKSAK GEP W SPWG GRPGWHIECSAM+A LGH FDIHGGG DL FPH
Sbjct: 182 KNNPLDFVLWKSAKPGEPSWSSPWGEGRPGWHIECSAMNAKELGHHFDIHGGGSDLTFPH 241
Query: 308 HENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLI 367
HENEIAQSC A N +++YW+H G V +D EKMSKSLGNFFTIR V+ Y +R FL
Sbjct: 242 HENEIAQSCCALNTPYVNYWMHTGMVQVDQEKMSKSLGNFFTIRDVLAQYDAETVRFFLT 301
Query: 368 GTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINK-- 425
HYRS +NYS L A + IY +L D +I D V INK
Sbjct: 302 TGHYRSQLNYSTDNLTQARASVERIYTSLRDV--------------NIESDYV--INKDS 345
Query: 426 -FHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVL 484
F F +M DD +T LA L + K +N +L AL + +
Sbjct: 346 SFVKQFCQAMDDDFNTPQALAVLFEISKELNVAKAAANNALAIDLASTLVALGEIVG--- 402
Query: 485 TVLGLMSTGYSEVLLQLREKALKRADLTEDQVL---QRIEDRTVARKNKEYEKSDAIRKD 541
LLQL A + D D+V I R AR +K++ +D R
Sbjct: 403 -------------LLQLDPAAFLQGDNDNDEVAIIEALIVQRNQARIDKDWAMADDARDK 449
Query: 542 LAAVGIALMDSPVGTTWRPA 561
L A+ I L DS TTWR A
Sbjct: 450 LNAMNIVLEDSAGKTTWRKA 469
>gi|418291506|ref|ZP_12903501.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM220]
gi|372199758|gb|EHP13951.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM220]
Length = 473
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 296/499 (59%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G++FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE-- 351
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ + + F +M+DD T +A L + +N + A RL++L
Sbjct: 352 -AGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKT----NNAQLAGRLKALGG----- 401
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
++GL+ +E L + + L+ +++ I R AR +K + +SD IR
Sbjct: 402 -----IIGLLQRDPTEFL----QGGVASDGLSNEEIEDLIARRKQARSDKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|339483845|ref|YP_004695631.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
gi|338805990|gb|AEJ02232.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
Length = 460
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/487 (44%), Positives = 293/487 (60%), Gaps = 33/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R+++ P + GKV +YVCG+T YD H+GHARV V FD + R+ + ++V
Sbjct: 2 LKIYNSIAREKQDFVPIIPGKVKIYVCGMTVYDYCHLGHARVLVVFDTVIRWFKANDFDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E +L++R+ + ++D L P+ EPR +D++ ++
Sbjct: 62 SYVRNITDIDDKIIKRAQENNESIGTLTQRFIQAMNEDSSALGVSSPTYEPRATDYVENM 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +++ AYR +GDVY++V FP YGQLSG+ L D RAGERV +DS KK+P DF
Sbjct: 122 IGMIGTLIEKDLAYRASNGDVYYAVHNFPSYGQLSGKSLNDLRAGERVEIDSNKKDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWKSAK GEPFWESPWG GRPGWHIECSAMS LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKPGEPFWESPWGRGRPGWHIECSAMSEQLLGVHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A ++ ++YW+HNGFV +D+EKMSKSLGNFFT+R++++ Y P +R F++ YRSP
Sbjct: 242 SEGAHDHPFVNYWMHNGFVRVDNEKMSKSLGNFFTVREILKHYQPEVVRFFILRAQYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDT-VTSINKFH-NDFLA 432
+NYS Q L D + AL L ALK+ P D N H F
Sbjct: 302 LNYSD--------------QHLKDTKLALDRL-YIALKEVKPIDMPAIDWNNLHAQRFKT 346
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T +A L + +N + G K+ L +
Sbjct: 347 AMEDDFNTPEAIAVLFELASDVN-----KTGSKENAGLLKGLGNLLG----------LLQ 391
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ LQ + + L +D + + I+ R ARK Y +DAIRK+L GI L D+
Sbjct: 392 QNPQEYLQNKVVTSELNSLPQDAIERLIQQRISARKEGRYSDADAIRKNLLEQGIILEDN 451
Query: 553 PVGTTWR 559
P GTTWR
Sbjct: 452 PQGTTWR 458
>gi|385852162|ref|YP_005898677.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
gi|325206985|gb|ADZ02438.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
Length = 473
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/499 (43%), Positives = 293/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + AAA D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTP-------AAAF------DLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAQLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPTEFL----QGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|87122362|ref|ZP_01078243.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
gi|86162337|gb|EAQ63621.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
Length = 460
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/484 (45%), Positives = 298/484 (61%), Gaps = 29/484 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S K+E P V GKVGMYVCG T YD HIGHAR ++FD++ R++R G+++
Sbjct: 2 LKVYNTLSGKKEEFVPLVPGKVGMYVCGNTVYDYCHIGHARAMISFDIIARHIRFSGFDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E P SL+ R E QD + L P EP+ ++ M I
Sbjct: 62 NYVRNITDVDDKIIKRAAENDETPESLTLRMIEAQTQDELKLGNKLPDREPKATEFMQEI 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
IDMI+ ++D GFAY+ GDVYF +K YG+L+ RKLED AG R+ V+S K+NPADF
Sbjct: 122 IDMISVLVDKGFAYQGSTGDVYFRTEKHEAYGKLNNRKLEDMLAGARIDVESAKENPADF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWKSAKEGE W+SPWG GRPGWHIECSAMS LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKEGEVHWQSPWGIGRPGWHIECSAMSTNCLGPHFDIHGGGPDLKFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A +++YW+H G V +++EKMSKSLGNFFT+R V+E Y+P +R ++ + YRSP
Sbjct: 242 SECANGTDYVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLEKYNPEVIRFLMVSSQYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
I+YS L A + +Y +L AL D D + S + + +M
Sbjct: 302 IDYSEQSLLEAKVGLERMYTSLQ----------GQALTD----DYIAS--SYTERYQQAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T V ++ L D ++ +N K +A ++ L K + + +LGL+
Sbjct: 346 DDDFNTPVAISVLFDLVRELN--------KAKASAADNAPILAKELSVLAELLGLLGQDP 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L + ++ ++E ++ I +R ARK+K + +SD IR +L+ GI L+DS
Sbjct: 398 EYFL----KNSVLNNGISEAEIETLIAERIQARKDKNFARSDEIRDELSEQGITLLDSRE 453
Query: 555 GTTW 558
GT+W
Sbjct: 454 GTSW 457
>gi|407713995|ref|YP_006834560.1| cysteinyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
gi|407236179|gb|AFT86378.1| cysteinyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
Length = 465
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/490 (45%), Positives = 293/490 (59%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R ++ P G V MYVCG+T YD H+GHARV V FD++ R+LR LGY+V
Sbjct: 4 LRIYNTLARDKQTFVPLQAGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGYDV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+ R+ H+D L P +EPR +D +P +
Sbjct: 64 TYVRNITDIDDKIIRRAVENGETIKSLTDRFIAALHEDADALGIARPDIEPRATDFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI + NG+AY+ DGDV ++V KF YG+LSG+ LED RAGERVA + K++P DF
Sbjct: 124 LGMIETLEANGYAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDAKEDPLDF 183
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK +K GEP W+S +G GRPGWHIECSAM + LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKQSKAGEPADTGWDSKYGRGRPGWHIECSAMGCSLLGEHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS AA ++YW+HNG+V ID+EKMSKSL NFFTIR+V+ Y +R F+ HY
Sbjct: 244 IAQSEAATGQPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRFFIARAHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDF 430
RSP+NYS V ++ A + +Y AL D P N+ H F
Sbjct: 304 RSPLNYSDVHIDDARNALGRLY---------------TALTDVAPDGAALDWNEAHAQRF 348
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
A+M+DD +T V ++ L + +N TR AL + +R++ VLGL+
Sbjct: 349 QAAMNDDFNTPVAVSVLFELATEVN---RTRD-----------PALARQLRSLGAVLGLL 394
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
L Q A++ A L + +I +R A++ K+Y +D IR +L G+AL
Sbjct: 395 GREPRAYLQQAAGAAVEGA-LDPAAIEAKIAERVAAKQAKDYAAADRIRAELLEAGVALE 453
Query: 551 DSPVG-TTWR 559
D P G T WR
Sbjct: 454 DKPGGLTEWR 463
>gi|421560018|ref|ZP_16005883.1| cysteine--tRNA ligase [Neisseria meningitidis 92045]
gi|402334103|gb|EJU69397.1| cysteine--tRNA ligase [Neisseria meningitidis 92045]
Length = 473
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/499 (43%), Positives = 294/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + AAA D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTP-------AAAF------DLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAQLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPTEFL----QGSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|385329332|ref|YP_005883635.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
gi|308390183|gb|ADO32503.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
Length = 699
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/499 (43%), Positives = 291/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 576
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 577 ENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAQLAGCL 622
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 623 KALGGIIGLLQRDPTEFL----QGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRD 678
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 679 LLNEHKIILEDNAGGTTWR 697
>gi|388467470|ref|ZP_10141680.1| cysteine--tRNA ligase [Pseudomonas synxantha BG33R]
gi|388011050|gb|EIK72237.1| cysteine--tRNA ligase [Pseudomonas synxantha BG33R]
Length = 460
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/489 (45%), Positives = 286/489 (58%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD HIGH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWGPGRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGTKPGEPSWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPCVAPAGGEAFVARFTEVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL + +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELAS-------VLGVLQMEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L+ A R D E L I+ R AR NK++ +SD IR L A+G+ L D
Sbjct: 399 DF------LQAGAEGRVDAAEVDAL--IQARLAARANKDWAESDRIRDQLTAMGVVLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|421562116|ref|ZP_16007952.1| cysteine--tRNA ligase [Neisseria meningitidis NM2657]
gi|254671629|emb|CBA09335.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha153]
gi|402335505|gb|EJU70770.1| cysteine--tRNA ligase [Neisseria meningitidis NM2657]
Length = 473
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 296/499 (59%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G++FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE-- 351
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ + + F +M+DD T +A L + +N + A RL++L
Sbjct: 352 -AGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKT----NNAQLAGRLKALGG----- 401
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
++GL+ +E L + + L+ +++ I R AR +K + +SD IR
Sbjct: 402 -----IIGLLQRDPTEFL----QGGVASDGLSNEEIEDLIARRKQARSDKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|15641850|ref|NP_231482.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121591342|ref|ZP_01678630.1| cysteinyl-tRNA synthetase [Vibrio cholerae 2740-80]
gi|121730275|ref|ZP_01682651.1| cysteinyl-tRNA synthetase [Vibrio cholerae V52]
gi|147673703|ref|YP_001217382.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|227081977|ref|YP_002810528.1| cysteinyl-tRNA synthetase [Vibrio cholerae M66-2]
gi|227118296|ref|YP_002820192.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|229508055|ref|ZP_04397560.1| cysteinyl-tRNA synthetase [Vibrio cholerae BX 330286]
gi|229511706|ref|ZP_04401185.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
gi|229518845|ref|ZP_04408288.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC9]
gi|229607616|ref|YP_002878264.1| cysteinyl-tRNA synthetase [Vibrio cholerae MJ-1236]
gi|254848934|ref|ZP_05238284.1| cysteinyl-tRNA synthetase [Vibrio cholerae MO10]
gi|255745392|ref|ZP_05419341.1| cysteinyl-tRNA synthetase [Vibrio cholera CIRS 101]
gi|298498113|ref|ZP_07007920.1| cysteinyl-tRNA synthetase [Vibrio cholerae MAK 757]
gi|360035732|ref|YP_004937495.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
gi|379741684|ref|YP_005333653.1| cysteinyl-tRNA synthetase [Vibrio cholerae IEC224]
gi|417813891|ref|ZP_12460544.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-49A2]
gi|417817628|ref|ZP_12464257.1| cysteinyl-tRNA synthetase [Vibrio cholerae HCUF01]
gi|418334866|ref|ZP_12943780.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-06A1]
gi|418338484|ref|ZP_12947378.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-23A1]
gi|418346401|ref|ZP_12951163.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-28A1]
gi|418350163|ref|ZP_12954894.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43A1]
gi|418355542|ref|ZP_12958261.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-61A1]
gi|419826827|ref|ZP_14350326.1| cysteine--tRNA ligase [Vibrio cholerae CP1033(6)]
gi|421318339|ref|ZP_15768907.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
gi|421321620|ref|ZP_15772173.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
gi|421325417|ref|ZP_15775941.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
gi|421329079|ref|ZP_15779589.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
gi|421332987|ref|ZP_15783464.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
gi|421336576|ref|ZP_15787037.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
gi|421340007|ref|ZP_15790439.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-20A2]
gi|421348335|ref|ZP_15798712.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-46A1]
gi|422896952|ref|ZP_16934405.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-40A1]
gi|422903151|ref|ZP_16938131.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48A1]
gi|422907036|ref|ZP_16941843.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-70A1]
gi|422913886|ref|ZP_16948392.1| cysteinyl-tRNA synthetase [Vibrio cholerae HFU-02]
gi|422926092|ref|ZP_16959106.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-38A1]
gi|423145411|ref|ZP_17133005.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-19A1]
gi|423150087|ref|ZP_17137401.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-21A1]
gi|423153907|ref|ZP_17141088.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-22A1]
gi|423156990|ref|ZP_17144083.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-32A1]
gi|423160561|ref|ZP_17147501.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-33A2]
gi|423165379|ref|ZP_17152110.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48B2]
gi|423731398|ref|ZP_17704701.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A1]
gi|423767016|ref|ZP_17712820.1| cysteine--tRNA ligase [Vibrio cholerae HC-50A2]
gi|423895289|ref|ZP_17727036.1| cysteine--tRNA ligase [Vibrio cholerae HC-62A1]
gi|423930727|ref|ZP_17731430.1| cysteine--tRNA ligase [Vibrio cholerae HC-77A1]
gi|424002842|ref|ZP_17745917.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A2]
gi|424006631|ref|ZP_17749601.1| cysteine--tRNA ligase [Vibrio cholerae HC-37A1]
gi|424024612|ref|ZP_17764263.1| cysteine--tRNA ligase [Vibrio cholerae HC-62B1]
gi|424027497|ref|ZP_17767100.1| cysteine--tRNA ligase [Vibrio cholerae HC-69A1]
gi|424586768|ref|ZP_18026347.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
gi|424591511|ref|ZP_18030938.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
gi|424595416|ref|ZP_18034737.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
gi|424599332|ref|ZP_18038513.1| cysteinyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
gi|424602052|ref|ZP_18041194.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
gi|424607022|ref|ZP_18045966.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
gi|424610847|ref|ZP_18049686.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-39A1]
gi|424613658|ref|ZP_18052446.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-41A1]
gi|424617639|ref|ZP_18056311.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-42A1]
gi|424622418|ref|ZP_18060926.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-47A1]
gi|424645383|ref|ZP_18083119.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A2]
gi|424653150|ref|ZP_18090530.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A2]
gi|424656971|ref|ZP_18094256.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A2]
gi|440710051|ref|ZP_20890702.1| cysteinyl-tRNA synthetase [Vibrio cholerae 4260B]
gi|443504209|ref|ZP_21071167.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-64A1]
gi|443508106|ref|ZP_21074870.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-65A1]
gi|443511949|ref|ZP_21078587.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-67A1]
gi|443515507|ref|ZP_21082018.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-68A1]
gi|443519298|ref|ZP_21085695.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-71A1]
gi|443524191|ref|ZP_21090404.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-72A2]
gi|443531789|ref|ZP_21097803.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-7A1]
gi|443535585|ref|ZP_21101463.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-80A1]
gi|443539133|ref|ZP_21104987.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A1]
gi|449055723|ref|ZP_21734391.1| Cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. Inaba G4222]
gi|11387140|sp|Q9KQZ9.1|SYC_VIBCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187631647|sp|A5F763.1|SYC_VIBC3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781697|sp|C3LNF1.1|SYC_VIBCM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|9656376|gb|AAF94996.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121546806|gb|EAX56972.1| cysteinyl-tRNA synthetase [Vibrio cholerae 2740-80]
gi|121627977|gb|EAX60538.1| cysteinyl-tRNA synthetase [Vibrio cholerae V52]
gi|146315586|gb|ABQ20125.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|227009865|gb|ACP06077.1| cysteinyl-tRNA synthetase [Vibrio cholerae M66-2]
gi|227013746|gb|ACP09956.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|229343534|gb|EEO08509.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC9]
gi|229351671|gb|EEO16612.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
gi|229355560|gb|EEO20481.1| cysteinyl-tRNA synthetase [Vibrio cholerae BX 330286]
gi|229370271|gb|ACQ60694.1| cysteinyl-tRNA synthetase [Vibrio cholerae MJ-1236]
gi|254844639|gb|EET23053.1| cysteinyl-tRNA synthetase [Vibrio cholerae MO10]
gi|255737222|gb|EET92618.1| cysteinyl-tRNA synthetase [Vibrio cholera CIRS 101]
gi|297542446|gb|EFH78496.1| cysteinyl-tRNA synthetase [Vibrio cholerae MAK 757]
gi|340036377|gb|EGQ97353.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-49A2]
gi|340037351|gb|EGQ98326.1| cysteinyl-tRNA synthetase [Vibrio cholerae HCUF01]
gi|341621711|gb|EGS47448.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-70A1]
gi|341621796|gb|EGS47529.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48A1]
gi|341622546|gb|EGS48200.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-40A1]
gi|341637547|gb|EGS62225.1| cysteinyl-tRNA synthetase [Vibrio cholerae HFU-02]
gi|341646298|gb|EGS70412.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-38A1]
gi|356417575|gb|EHH71190.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-06A1]
gi|356418447|gb|EHH72044.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-21A1]
gi|356423021|gb|EHH76482.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-19A1]
gi|356428467|gb|EHH81693.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-22A1]
gi|356430126|gb|EHH83335.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-23A1]
gi|356433480|gb|EHH86669.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-28A1]
gi|356440077|gb|EHH93038.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-32A1]
gi|356444659|gb|EHH97468.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43A1]
gi|356445658|gb|EHH98460.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-33A2]
gi|356451191|gb|EHI03892.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48B2]
gi|356452040|gb|EHI04719.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-61A1]
gi|356646886|gb|AET26941.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
gi|378795194|gb|AFC58665.1| cysteinyl-tRNA synthetase [Vibrio cholerae IEC224]
gi|395916597|gb|EJH27427.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
gi|395917255|gb|EJH28083.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
gi|395918614|gb|EJH29438.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
gi|395927613|gb|EJH38376.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
gi|395928389|gb|EJH39142.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
gi|395931675|gb|EJH42419.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
gi|395939290|gb|EJH49972.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-20A2]
gi|395942914|gb|EJH53590.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-46A1]
gi|395958976|gb|EJH69427.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A2]
gi|395959689|gb|EJH70106.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A2]
gi|395962555|gb|EJH72851.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-42A1]
gi|395970947|gb|EJH80652.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-47A1]
gi|395973689|gb|EJH83243.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
gi|395976039|gb|EJH85503.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
gi|408007296|gb|EKG45379.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-39A1]
gi|408013276|gb|EKG51005.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-41A1]
gi|408031528|gb|EKG68144.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
gi|408032309|gb|EKG68895.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
gi|408041832|gb|EKG77920.1| cysteinyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
gi|408043299|gb|EKG79300.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
gi|408053849|gb|EKG88848.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A2]
gi|408607617|gb|EKK81020.1| cysteine--tRNA ligase [Vibrio cholerae CP1033(6)]
gi|408624020|gb|EKK96972.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A1]
gi|408633949|gb|EKL06229.1| cysteine--tRNA ligase [Vibrio cholerae HC-50A2]
gi|408654159|gb|EKL25301.1| cysteine--tRNA ligase [Vibrio cholerae HC-77A1]
gi|408655089|gb|EKL26214.1| cysteine--tRNA ligase [Vibrio cholerae HC-62A1]
gi|408845239|gb|EKL85355.1| cysteine--tRNA ligase [Vibrio cholerae HC-37A1]
gi|408846012|gb|EKL86124.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A2]
gi|408870174|gb|EKM09454.1| cysteine--tRNA ligase [Vibrio cholerae HC-62B1]
gi|408878800|gb|EKM17793.1| cysteine--tRNA ligase [Vibrio cholerae HC-69A1]
gi|439974274|gb|ELP50451.1| cysteinyl-tRNA synthetase [Vibrio cholerae 4260B]
gi|443431154|gb|ELS73706.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-64A1]
gi|443435312|gb|ELS81455.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-65A1]
gi|443438932|gb|ELS88647.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-67A1]
gi|443442917|gb|ELS96219.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-68A1]
gi|443447094|gb|ELT03749.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-71A1]
gi|443449525|gb|ELT09816.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-72A2]
gi|443457179|gb|ELT24576.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-7A1]
gi|443461125|gb|ELT32198.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-80A1]
gi|443465233|gb|ELT39893.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A1]
gi|448264762|gb|EMB01999.1| Cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. Inaba G4222]
Length = 459
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/487 (44%), Positives = 296/487 (60%), Gaps = 34/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP V GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E E SL+ R +E + D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY D GDV F V ++ EYG+LS + L+ +AG RV +++ K++P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM+++ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L L S+P ++ F A+M
Sbjct: 302 LNYSEENLNQARASLERLYNALR------------GLDRSVP---AAGGEEYVTRFTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L ++ + + +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KSEDMTNASALGSLMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTED--QVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+L Q E + + ED Q+ I+ R +R K++ +D R L +GI L D
Sbjct: 393 --ILYQEPEAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDG 450
Query: 553 PVGTTWR 559
P GTTWR
Sbjct: 451 PNGTTWR 457
>gi|290476082|ref|YP_003468980.1| cysteine tRNA synthetase [Xenorhabdus bovienii SS-2004]
gi|289175413|emb|CBJ82216.1| cysteine tRNA synthetase [Xenorhabdus bovienii SS-2004]
Length = 460
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/488 (45%), Positives = 288/488 (59%), Gaps = 35/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP EGKVGMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY++
Sbjct: 2 LKIFNTLSRQKEEFKPIHEGKVGMYVCGITIYDLCHIGHGRTFVAFDVIARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E +L+ R E H D L+ P EPR + H+ I
Sbjct: 62 TYVRNVTDVDDKIIKRATENNESCDALTTRMLSEMHSDFDALNIQRPDSEPRATQHISEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I + ++++ G AY D GDV FS+D P+YG LS + LE +AG RV + K+NP DF
Sbjct: 122 IQITEELINRGHAYVADNGDVMFSIDTNPDYGLLSRQDLEQLQAGARVEIADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGVGRPGWHIECSAMNGKQLGQHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A +++YW+H+G V +D EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHGGPYVNYWMHSGMVMVDKEKMSKSLSNFFTIRDVLGYYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + +Y L +K S P T F F +M
Sbjct: 302 LNYTEENLKQARTALERLYTALRGTDK------------SAQP---TGSEAFEARFTEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L K + + + A E +R + +LGL+
Sbjct: 347 NDDFNTPEAYSVLFDIAREINCL------KTENLAAANGLAAE--LRKLAGILGLLE--- 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
Q E+ L+ +D V Q I+ R AR NKE+ +DA R L A+ I L D
Sbjct: 396 -----QEPEQFLQGGAHVDDDVAQIEALIKQRNDARTNKEWALADAARDQLNAMRIELED 450
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 451 GPQGTTWR 458
>gi|386818264|ref|ZP_10105482.1| cysteinyl-tRNA synthetase [Thiothrix nivea DSM 5205]
gi|386422840|gb|EIJ36675.1| cysteinyl-tRNA synthetase [Thiothrix nivea DSM 5205]
Length = 461
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/487 (44%), Positives = 296/487 (60%), Gaps = 28/487 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E P +V MYVCG+T YD H+GHARV V FD +YRYL+ GY V
Sbjct: 2 LHIYNSLTRQKETFHPIHPRQVFMYVCGMTVYDYCHLGHARVMVVFDTVYRYLKASGYLV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R+ + H+D L+ L P EPR + ++P +
Sbjct: 62 QYVRNITDIDDKIIKRAAENGEPIEALTARFIDAMHEDEAALNVLRPDDEPRATSNIPEM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI +LD G AY+ +GDVY+ V KF YG+LSGRKLED RAGERVAVD K +P DF
Sbjct: 122 LAMIQTLLDKGLAYQGSNGDVYYDVSKFDGYGKLSGRKLEDMRAGERVAVDEIKDDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK++K GEP W++PWG GRPGWHIECSAMS LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKASKPGEPAWDAPWGAGRPGWHIECSAMSQKLLGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S + H++YW+HNGF+ ++ EKMSKSLGNFFTIR+V++ Y A+R F++ +HYRS
Sbjct: 242 SEGCTGHKHVNYWMHNGFIRVNDEKMSKSLGNFFTIREVLQHYRAEAVRFFILNSHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ QL++A+ + +Y L +P + ++ F A+M
Sbjct: 302 LNYATDQLDAANASLSRLYTALR----------------GLPEAGAANYTEYERRFDAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A + + + IN + T + + A L +L L +L
Sbjct: 346 DDDFNTPEAIAVMFELARDIN-RIRTEQSEGAAAPLGALLKLLGKALGIL-------QDN 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E L+ A +D D ++Q+ R AR K + +SD IR +L G+ L DS
Sbjct: 398 PEEWLKGSAGADGLSDADIDALIQQ---RLAARAAKNWGESDRIRDELKTKGVILEDSAG 454
Query: 555 GTTWRPA 561
T+WR A
Sbjct: 455 ATSWRRA 461
>gi|393762614|ref|ZP_10351241.1| cysteinyl-tRNA ligase [Alishewanella agri BL06]
gi|392606849|gb|EIW89733.1| cysteinyl-tRNA ligase [Alishewanella agri BL06]
Length = 459
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/490 (46%), Positives = 294/490 (60%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+SR++E+ P GKVG+YVCG+T YD H+GHAR YV FDV+ RYLR GY+V
Sbjct: 2 LQIYNTLSRQKEVFTPITPGKVGLYVCGITIYDYCHVGHARTYVAFDVINRYLRFCGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE +L+ R+ + H D L LP +EP V+ HM I
Sbjct: 62 TYVRNITDVDDKIIKRAAENGESCDALTARFTQAMHADFKALGLLPADIEPTVTGHMQEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ Q+LD G+AY DGDV F V K+ YG+LS + LE +AG RV V K +P DF
Sbjct: 122 ILMVQQLLDKGYAYIAKDGDVLFDVSKYDAYGELSQQNLEMLQAGARVEVSDSKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP+W+SPWG GRPGWHIECSAMSA +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKTAKPGEPYWQSPWGNGRPGWHIECSAMSAKHLGAHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++ WIH G V +D EKMSKSLGNFFT+++V+ Y+ A+R FL+ + YRS
Sbjct: 242 STCAHGHKYVNTWIHTGMVQVDKEKMSKSLGNFFTVKEVLAQYNAEAVRYFLLSSQYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS LE A + +Y AL+D P V N + F A+M
Sbjct: 302 LNYSKENLEQAHAALGRLYN---------------ALRDITPATQVDLNNDYVARFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L L + + +N T K LAA+ +T+ VL +
Sbjct: 347 DDDFNTPEALPVLFELAREVNRFKTTEPAKA-----AELAAVLQTLAGVLGI-------- 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LQ +A ++ ++D+V Q I R AR K++ +DA R +L A+GI L D
Sbjct: 394 ----LQGDAEAFLKSGASDDEVGQIEALIAKRNAARAAKDWAAADAARAELTALGIVLED 449
Query: 552 SPVGTTWRPA 561
T+WR A
Sbjct: 450 KNGVTSWRKA 459
>gi|422017177|ref|ZP_16363745.1| cysteinyl-tRNA ligase [Providencia alcalifaciens Dmel2]
gi|414105882|gb|EKT67436.1| cysteinyl-tRNA ligase [Providencia alcalifaciens Dmel2]
Length = 462
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/485 (44%), Positives = 292/485 (60%), Gaps = 27/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FD + RYLR+LGY++
Sbjct: 2 LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E L+ R E H+D L+ L P EPR + H+ I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIHEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTESLIERGHAYVADNGDVMFEVKTDPNYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP WESPWG GRPGWHIECSAM++ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSL NFFTIR V+E Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + +Y L +K+ T + + F +M
Sbjct: 302 LNYTEENLKQARTALERLYTALRGTDKSA---------------TPAGGEIYKSRFCEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T +AL D + +N L + +++ + +R + VLGL+
Sbjct: 347 NDDFNTPEAYSALFDMARELNRL--------KTENMDAANGMAAQLRELAKVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ ++ A++ + + L I+ R AR++K++ +D R L A+GI L DS
Sbjct: 398 PETFLQGGAQSEDDAEVAKIEAL--IKQRNDARQSKDWALADQARDALTAMGIVLEDSSA 455
Query: 555 GTTWR 559
GTTWR
Sbjct: 456 GTTWR 460
>gi|239503714|ref|ZP_04663024.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB900]
gi|421678924|ref|ZP_16118806.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC111]
gi|410391847|gb|EKP44211.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC111]
Length = 473
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/488 (44%), Positives = 303/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEKYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S + +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + + AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|158319520|ref|YP_001512027.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
gi|187629787|sp|A8MLB7.1|SYC_ALKOO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|158139719|gb|ABW18031.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
Length = 464
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/485 (44%), Positives = 296/485 (61%), Gaps = 28/485 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++RK+E P EGKV MY CG T Y+ HIG+AR ++ FD L RYL + GY+V +
Sbjct: 3 LYNTLTRKKEEFIPLEEGKVRMYACGPTVYNYFHIGNARTFMVFDALRRYLIYRGYDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII RANE G P +S R+ +E+ D L + P+V+++M II
Sbjct: 63 VQNFTDVDDKIIRRANEEGVAPEEISERFIKEYFYDAGTLGIEKADIHPKVTENMAEIIA 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ ++++ G AY +GDVYF V K+ EYG+LS + LED +AG R+ ++ KKNP DFALW
Sbjct: 123 FVAKLVEKGHAYESNGDVYFDVSKYEEYGKLSKQSLEDLQAGARIEINEYKKNPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
KSAK GEP WESPWG GRPGWHIECSAM+ YLG + DIHGGG DLVFPHHENEIAQS A
Sbjct: 183 KSAKAGEPSWESPWGNGRPGWHIECSAMAKRYLGETIDIHGGGGDLVFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+YW+H G++ +D++KMSKSL NFFT R++ E + LR F++ HYR+PIN+
Sbjct: 243 CSGKKFANYWLHVGYLNVDNKKMSKSLNNFFTPREISEEFDLENLRFFMLSAHYRNPINF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDT--VTSINKFHNDFLASMS 435
S LE+A + +Y ++ E LL+ AA ++ + + + F N F+ ++
Sbjct: 303 SRDLLEAAKNGLDRLYTGKNNLE---YLLENAAEREVSEEEKNFIHGLQSFKNQFIDAVD 359
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T +A + D ++ IN + + KK ++ A + + VLGL
Sbjct: 360 DDFNTADGIAVIFDLVREINSHISEKNSKK------AVEASYDLLMELTGVLGL------ 407
Query: 496 EVLLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
LKR ++ ++R I +R ARK+K + SD IR DL GI L D+
Sbjct: 408 ----------LKREAEDLEEEIERLIAERQQARKDKNFALSDKIRDDLKEKGIVLEDTAQ 457
Query: 555 GTTWR 559
G WR
Sbjct: 458 GVKWR 462
>gi|293608603|ref|ZP_06690906.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427426577|ref|ZP_18916628.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-136]
gi|292829176|gb|EFF87538.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425696633|gb|EKU66338.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-136]
Length = 473
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/488 (44%), Positives = 304/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G+ V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S I +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSF-------IERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N R K++ + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELN-----RAVKEE--QADQATVLYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + ++AL L++ ++ I+ R A+K K++ K+D IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQEALT---LSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|237747642|ref|ZP_04578122.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
gi|229379004|gb|EEO29095.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
Length = 462
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/489 (44%), Positives = 295/489 (60%), Gaps = 37/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R +E+ P GKV MYVCG+T YD HIGHAR+ ++FDV+YR+L+ GYEV
Sbjct: 4 LQIYNSLTRSKEVFTPIEPGKVRMYVCGMTIYDYCHIGHARMMMSFDVVYRWLKATGYEV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+ R+ + H+D L LPP EPR ++++P +
Sbjct: 64 TYVRNITDIDDKIINRAAENGEPISSLTSRFTQYMHEDTCALGILPPDHEPRATEYVPEM 123
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+++I ++ NG AY+ DGDV +SV F YG+LSG+ L+D RAGERV +++ K++P DF
Sbjct: 124 LELIGKLEKNGLAYQSTDGDVNYSVRDFEGYGKLSGKSLDDLRAGERVDINTGKRDPLDF 183
Query: 255 ALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWKSAK EP W S WG GRPGWHIECSAMS+ LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKSAKPTEPEEAKWPSRWGTGRPGWHIECSAMSSKLLGEHFDIHGGGADLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A ++ ++YW+HNGFV +D+EKMSKSLGNFFTIR V++ Y LR F+I +HY
Sbjct: 244 IAQSEGASHHPFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLKSYDAEVLRFFIIRSHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RSP+NYS L+ A + +Y L D + + D A DS ++ F
Sbjct: 304 RSPLNYSDAHLDDAKNALTRLYTALKDVD----VKDQAVDWDS----------EYAKRFA 349
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
++M+DD +T +A L + +N G + L LE+ R L G +
Sbjct: 350 SAMNDDFNTPEAVAVLFELANEVNRTHLAELGSQLKALAGVLGLLERDPRQFLQGDGAVD 409
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
G E + +I+ R A+K K + ++D IR +L GI L D
Sbjct: 410 EG------------------EEKWIESQIQARIDAKKAKNFAEADKIRSELLEKGIVLED 451
Query: 552 SPVG-TTWR 559
P G T WR
Sbjct: 452 KPGGLTEWR 460
>gi|424659553|ref|ZP_18096802.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-16]
gi|408052108|gb|EKG87167.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-16]
Length = 459
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/487 (44%), Positives = 300/487 (61%), Gaps = 34/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP V GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E E SL+ R +E + D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENEETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY D GDV F V ++ EYG+LS + L+ +AG RV +++ K++P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L ++++ AA +D + F A+M
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLDRSVP---AAGGEDYVTR------------FTAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L ++ + + +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREINRL--------KSEDMTNASALGSLMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTED--QVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+L Q E + + ED Q+ I+ R +R K++ +D R L +GI L D
Sbjct: 393 --ILYQEPEAFFQGSAEDEDAAQIEALIKLRNDSRAAKDWANADLARDKLNEMGIVLEDG 450
Query: 553 PVGTTWR 559
P GTTWR
Sbjct: 451 PNGTTWR 457
>gi|343496600|ref|ZP_08734695.1| cysteinyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
gi|342821044|gb|EGU55843.1| cysteinyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
Length = 461
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/489 (45%), Positives = 294/489 (60%), Gaps = 36/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++N+++R++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIFNSLTRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R E H D L+ P VEPR + + I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID++ +++ GFAY D GDV F V K+ EYG+LS + L+ +AG RV V+ K++P DF
Sbjct: 122 IDLVETLIERGFAYVADNGDVMFEVKKYDEYGKLSRQDLDQLQAGARVDVELAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+++ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y +L + L L S P ++ F +M
Sbjct: 302 LNYSEENLNQARASLERLYTSL----RGLDL--------SASP---AGGEEYVTRFTEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N + KG+ LE +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRI----KGEN----LEQASALGALLRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L Q E LK D + IE R +R K++ +D R L +GI L
Sbjct: 393 --ILHQDPEAFLKGGAADNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLNEMGIELE 450
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 451 DGPEGTTWR 459
>gi|312796649|ref|YP_004029571.1| cysteinyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
gi|312168424|emb|CBW75427.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Burkholderia rhizoxinica
HKI 454]
Length = 483
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/491 (45%), Positives = 291/491 (59%), Gaps = 35/491 (7%)
Query: 75 QLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYE 134
QL LYNT+SR +E P +G+V MYVCG+T YD H+GH R+ V FD++ R+LR LGY
Sbjct: 20 QLRLYNTLSRNKETFVPLHDGEVRMYVCGMTVYDYCHVGHGRLMVVFDMIQRWLRTLGYR 79
Query: 135 VCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPH 194
V YVRN TD+DDKII RA + GE +L+ R+ H+D L+ P EPR + +
Sbjct: 80 VTYVRNITDIDDKIIRRAVDNGEPIRALTERFIAAMHEDEAALNIQRPDHEPRATQFISQ 139
Query: 195 IIDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPAD 253
++ MI + NG+AY DGDV +SV KF YGQLSG+ LED RAGERV + K++P D
Sbjct: 140 MLGMIDALERNGYAYSGRDGDVNYSVRKFAAYGQLSGKSLEDLRAGERVTQNDAKEDPLD 199
Query: 254 FALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHEN 310
F LWK +K+GEP W+S WG GRPGWHIECSAMS A LG FDIHGGG DL FPHHEN
Sbjct: 200 FVLWKRSKDGEPPDTGWDSKWGRGRPGWHIECSAMSCALLGERFDIHGGGQDLQFPHHEN 259
Query: 311 EIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTH 370
EIAQS ++YW+HNGFV +D+EKMSKSLGNFFT+R V++ Y +R+ ++ H
Sbjct: 260 EIAQSEGVTGQPFVNYWLHNGFVNVDNEKMSKSLGNFFTLRDVLQRYDGEVIRMLILRAH 319
Query: 371 YRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-ND 429
YRSP+NYS L+ A + +Y ALK+ P D ++ H
Sbjct: 320 YRSPLNYSDSHLDDARAALTRLY---------------TALKNVAPDDRALDWSERHAAA 364
Query: 430 FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGL 489
F A+M+DD +T V AAL D + +N R G AL + ++ + VLG+
Sbjct: 365 FRAAMNDDFNTPVAFAALFDLVTDLN-----RTGDP---------ALARQLKGLAGVLGM 410
Query: 490 MSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
+ E L + A L Q+ ++IE R A++ K Y ++D IR L G+ L
Sbjct: 411 LGRDPREYLQARAPATDELAPLDAAQIDEQIEARAQAKRAKNYAEADRIRAALLEAGVVL 470
Query: 550 MDSPVGTT-WR 559
D P G T WR
Sbjct: 471 EDKPGGKTEWR 481
>gi|419955025|ref|ZP_14471158.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri TS44]
gi|387968208|gb|EIK52500.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri TS44]
Length = 461
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/487 (46%), Positives = 285/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +Y+T+S+ ++ +KP + KV MYVCG+T YD HIGHARV V FDV+ R+LRH GYE+
Sbjct: 3 LSIYSTLSKSKDELKPLEDNKVRMYVCGMTVYDFCHIGHARVMVAFDVVARWLRHRGYEL 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE L R H+D L+ L P +EPR +DH+ +
Sbjct: 63 TYVRNITDIDDKIIKRAKENGESFQELVARMIAAMHEDEARLNVLRPDLEPRATDHIAGM 122
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D GFAY +GDVY+ V KF YG+LS RK+ED + G R+ VD K++P DF
Sbjct: 123 HVMIQTLIDKGFAYAPGNGDVYYRVGKFEGYGKLSRRKIEDLKIGARIEVDEAKEDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP WESPWGPGRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 183 VLWKGAKPGEPSWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 243 SEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P F F A+M
Sbjct: 303 INYSEDSLREAKGALERFYNGLK----------------GLPVAAPAGGEAFVERFGAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L + ++ +N L T +LAA K + VL VL L +
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLRET-----DLAGAAALAARLKELAGVLGVLQLAPDAF 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D V I R AR K + +SD IR L A+G+ L D
Sbjct: 402 ------LQAGAAGKVDAA--AVEALIAARLQARSEKNWAESDRIRDQLTAMGVVLEDGKG 453
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 454 GTTWRLA 460
>gi|433522782|ref|ZP_20479461.1| cysteine--tRNA ligase [Neisseria meningitidis 61103]
gi|432257297|gb|ELL12600.1| cysteine--tRNA ligase [Neisseria meningitidis 61103]
Length = 473
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 295/499 (59%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE-- 351
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ + + F +M+DD T +A L + +N + A RL++L
Sbjct: 352 -AGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVN----KTNNAQLAGRLKALGG----- 401
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
++GL+ +E L + + L+ +++ I R AR +K + +SD IR
Sbjct: 402 -----IIGLLQRDPTEFL----QGGVASDGLSNEEIEDLIARRKQARSDKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|421624016|ref|ZP_16064894.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC098]
gi|408702528|gb|EKL47938.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC098]
Length = 473
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/488 (44%), Positives = 303/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE E L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENDETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ AL S I +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSF-------IERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + + AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQDALA---LSDAEIENFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|410088151|ref|ZP_11284848.1| Cysteinyl-tRNA synthetase [Morganella morganii SC01]
gi|409765456|gb|EKN49568.1| Cysteinyl-tRNA synthetase [Morganella morganii SC01]
Length = 462
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/485 (45%), Positives = 289/485 (59%), Gaps = 27/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FD + RYLRH GY+V
Sbjct: 2 LKIYNTLSRQKEEFKPINPGKIGMYVCGITVYDLCHIGHGRTFVAFDTIVRYLRHAGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y+RN TDVDDKII RANE E L R E H+D ++ + P EPR + H+ I
Sbjct: 62 NYIRNITDVDDKIIKRANENNETCDQLVDRMVAEMHRDFDAMNLMRPDSEPRATHHIKEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +LD G AY D GDV F + PEYG LS + LE +AG RV V K+NP DF
Sbjct: 122 IEITQLLLDRGHAYVADNGDVMFDISSDPEYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSL NFFTIR V+ Y P +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLGYYDPETVRYFLLSAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + Y L +K DAA + + +F N F +M
Sbjct: 302 LNYTEENLKQARTALERFYTALRGTDK-----DAAVVVNE----------EFANRFRDAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L K++ M + L +R + VLGL++
Sbjct: 347 DDDFNTPEAYSVLFDMARELNRL------KQEDM--TAANGLAAQLRQLAGVLGLLTQDP 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L+ A +D ++ I+ R AR +KE+ +DA R L +GI L D P
Sbjct: 399 EQF---LQSGAQSESDEDAAKIEALIKQRNDARASKEWALADAARDALTDMGIVLEDGPQ 455
Query: 555 GTTWR 559
GTTWR
Sbjct: 456 GTTWR 460
>gi|33152217|ref|NP_873570.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
gi|38372510|sp|Q7VMA0.1|SYC_HAEDU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|33148439|gb|AAP95959.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
Length = 459
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/490 (44%), Positives = 291/490 (59%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR+ GY +
Sbjct: 2 LKIYNTLKREKEEFKPINPAQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E +L R E H D L+ + P VEPR ++H+ I
Sbjct: 62 RYVRNITDVDDKIIKRALENNESCEALVERMIAEMHNDFDALNIMRPDVEPRATEHIAEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ +++ NG AY DGDV F V F +YG LS + L+ +AG RV + S KKNP DF
Sbjct: 122 IAMVEKLIMNGHAYVAADGDVMFDVTSFNQYGALSRQNLDQLQAGARVEIKSAKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKRSKENEPSWLSPWGNGRPGWHIECSAMNNKELGEHFDIHGGGADLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YW+H G +TID EKMSKS+GNFF+IR ++ LY +LR F + HYRS
Sbjct: 242 SCCAHQGEYVNYWLHTGMLTIDKEKMSKSVGNFFSIRHMLGLYDAESLRYFFLTAHYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YS L+ A + +Y L C+ +++ + + VT+ F +M
Sbjct: 302 LDYSTDNLDLARSALERLYTALRGCD--------LSVQANGGENYVTA-------FKTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA L + + +N L + ++QA AL ++ + VLGL++
Sbjct: 347 DDDFNTPAALAVLFEMAREVNKL--KTEDQQQA------NALAVCLKELAAVLGLLTQDP 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
L + ++ DQ + I+ R A+ NK + +D +R L A+ I L D
Sbjct: 399 DNFL---------KGEVNIDQTAEIEALIQQRNQAKANKNWAVADQVRGKLKAMNILLED 449
Query: 552 SPVGTTWRPA 561
+P GT WR A
Sbjct: 450 TPTGTVWRKA 459
>gi|392546145|ref|ZP_10293282.1| cysteinyl-tRNA ligase [Pseudoalteromonas rubra ATCC 29570]
Length = 459
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/491 (46%), Positives = 292/491 (59%), Gaps = 38/491 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +Y+T++R++ KP VEGKVGMYVCG+T YD H+GHAR YV+FDV+ RYLRHLGYEV
Sbjct: 2 LQIYDTLTRQKTEFKPIVEGKVGMYVCGITIYDFCHVGHARTYVSFDVMNRYLRHLGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E+ +L+ R + H+D L+ LP +EP V+ HM I
Sbjct: 62 TYVRNITDVDDKIIKRAAENNEEINALTVRMTKAMHEDFEALNILPADIEPTVTGHMDEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+MI ++++ G AY +GDV F V F +YG+LS + L+ +AG RV V K +P DF
Sbjct: 122 IEMIERLIEKGHAYVASNGDVLFDVSTFEDYGKLSQQDLDMLQAGARVEVAEGKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W SPWG GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWTSPWGEGRPGWHIECSAMSSKHLGELFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++ WIH G V ++ EKMSKSLGNFFT+R+V++ Y +R FLI HYRS
Sbjct: 242 SCCANNGCYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLKAYDRETVRYFLINGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS LE A + IY L E +T + N F F A+M
Sbjct: 302 LNYSQENLEQARSSLERIYTALRGVELV---------------ETELAGNPFVARFEAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T L + + K +N LL K L L + VLG+
Sbjct: 347 NDDFNTPEALPVIFELAKEVN-LLKDSDAKAAGEHAFILVKLAE-------VLGIA---- 394
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKN----KEYEKSDAIRKDLAAVGIALM 550
Q +A D ED+V +IE RKN K++ +DA R L A+G+ L
Sbjct: 395 -----QQDPEAFLHGDQDEDEV-AKIEALIEQRKNARADKDWAAADAARDALTAMGVVLE 448
Query: 551 DSPVGTTWRPA 561
DS TTWR A
Sbjct: 449 DSAGKTTWRKA 459
>gi|375111151|ref|ZP_09757362.1| cysteinyl-tRNA synthetase [Alishewanella jeotgali KCTC 22429]
gi|374568693|gb|EHR39865.1| cysteinyl-tRNA synthetase [Alishewanella jeotgali KCTC 22429]
Length = 459
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/490 (46%), Positives = 293/490 (59%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+SR++E+ P GKVG+YVCG+T YD H+GHAR YV FDV+ RYLR GY+V
Sbjct: 2 LQIYNTLSRQKEVFTPITPGKVGLYVCGITIYDYCHVGHARTYVAFDVINRYLRFCGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE +L+ R+ + H D L LP +EP V+ HM I
Sbjct: 62 TYVRNITDVDDKIIKRAAENGESCDALTARFTQAMHADFNALGLLPADIEPTVTGHMQEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ Q+LD G+AY DGDV F V K+ YG LS + LE +AG RV V K +P DF
Sbjct: 122 ILMVQQLLDKGYAYIAKDGDVLFDVSKYQAYGALSQQNLEMLQAGARVEVSDSKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP+W+SPWG GRPGWHIECSAMSA +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKTAKPGEPYWQSPWGNGRPGWHIECSAMSAKHLGAHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++ WIH G V +D EKMSKSLGNFFT+++V+ Y+ A+R FL+ + YRS
Sbjct: 242 STCAHGHKYVNTWIHTGMVQVDKEKMSKSLGNFFTVKEVLAQYNAEAVRYFLLSSQYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS LE A + +Y AL+D P V N + F A+M
Sbjct: 302 LNYSKENLEQAHAALGRLYN---------------ALRDITPATQVDLNNDYVTRFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L L + + +N T K LAA+ +T+ VL +
Sbjct: 347 DDDFNTPEALPVLFELAREVNRFKTTEPAKA-----AELAAVLQTLAGVLGI-------- 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LQ +A ++ ++D+V Q I R AR K++ +DA R +L A+GI L D
Sbjct: 394 ----LQGDAEAFLKSGASDDEVGQIEALIAKRNAARAAKDWAAADAARAELTALGIVLED 449
Query: 552 SPVGTTWRPA 561
T+WR A
Sbjct: 450 KNGVTSWRKA 459
>gi|375134138|ref|YP_004994788.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
gi|325121583|gb|ADY81106.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
Length = 473
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/488 (44%), Positives = 302/488 (61%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G+ V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S I +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQKTTETLDQSF-------IERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + ++AL L++ ++ I+ R A+K K++ K+D IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQEALS---LSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|168187713|ref|ZP_02622348.1| cysteinyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
gi|169294420|gb|EDS76553.1| cysteinyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
Length = 466
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/485 (41%), Positives = 299/485 (61%), Gaps = 27/485 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
L+NTM+R++E KP +G+V MYVCG T Y+ HIG+ R ++ FD + RY + GY+V +
Sbjct: 3 LFNTMTRQKEEFKPIKDGQVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYRGYKVNF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTD+DDK+I +ANE L R+ +E+++D L+ +V PR +++M II+
Sbjct: 63 IQNFTDIDDKMIKKANEENITVKELGDRFIQEYYKDADGLNIKRATVNPRATEYMDEIIE 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ ++D G+AY V+GDVYF+ +F EYG+LSG+ L+D +AG R+++D RKK+P DFA+W
Sbjct: 123 FVRDLIDKGYAYEVNGDVYFNTKQFKEYGKLSGQNLDDLQAGARISIDERKKDPMDFAIW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
KS K GEP W+ PWG GRPGWHIECS M+ LG + DIH GG DLVFPHHENEIAQS A
Sbjct: 183 KSEKPGEPSWDCPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+H+ ++ ID++KMSKSL NFFT R+++E Y +RLF++ HYR+P+N+
Sbjct: 243 RNGKAFAHYWMHSAYLNIDNKKMSKSLNNFFTTREILEKYDAEVVRLFMLSAHYRTPLNF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDT---VTSINKFHNDFLASM 434
S L+SA +Y + + E+ LLD + D I D V ++N + ++ M
Sbjct: 303 SNELLQSAKASNERLYNAIGNLER---LLDEVKI-DKITEDEKEYVKNLNSYKEKYIEKM 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A + D +K IN ++T K E + + IR + LG++
Sbjct: 359 DDDFNTADAIAVIFDLVKDINTNINTESSK------ELVEYSLELIRELGKPLGILQKS- 411
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+L L ++ + IE R ARK++++ +D IR DL A GI L D+P
Sbjct: 412 --TILDLNT-----------EIEKLIEQRQQARKDRDWALADKIRDDLKARGIVLEDTPQ 458
Query: 555 GTTWR 559
G W+
Sbjct: 459 GVRWK 463
>gi|167626735|ref|YP_001677235.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189082064|sp|B0U0I3.1|SYC_FRAP2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167596736|gb|ABZ86734.1| Cysteine--tRNA ligase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
Length = 459
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/485 (44%), Positives = 287/485 (59%), Gaps = 29/485 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
YN++S K+E KP K+ MYVCG+T YD HIGHAR + FDV+ RY ++ G++V +
Sbjct: 3 FYNSLSGKKEEFKPIEPNKIKMYVCGITVYDDCHIGHARTNIAFDVINRYFKYRGFDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L R + H L+ L P+ EPR + +P +I
Sbjct: 63 VRNITDIDDKIIKRANENGETTDKLVERTIKSMHDAFDKLNILRPTKEPRATQTIPEMIA 122
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI +++ GFAY+ +GDV++ V KF +YG+LS + LE G RV V K+NP DF L
Sbjct: 123 MIETLVEKGFAYQGTNGDVFYRVAKFADYGKLSKQNLEALEQGSRVDVVEEKENPMDFVL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AKEGEP W+SPWG GRPGWHIECSAMS LG +FDIH GG DL FPHHENEIAQS
Sbjct: 183 WKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +YW+H+G V +++EKMSKSL NFFTI +V+E YHP +R FL T YRS IN
Sbjct: 243 ACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTINEVIEEYHPEVIRYFLASTVYRSEIN 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L++A + ++ L D E ++ ++P D +++ F+ +M +
Sbjct: 303 YSKENLDNARASVERLFNALRDIE---------PVEVNLPDDA----SEYEEKFIKAMDN 349
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L K IN L K K +R + VLG++ T E
Sbjct: 350 DFNTPEALAVLFSLAKEINTLKTVNKYKASGYAF--------LLRKLCDVLGILFTDIEE 401
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K D++E + L I +RT A+K+K Y ++D IR DL GI L DS GT
Sbjct: 402 YF-----KQGDGIDVSEIEKL--IAERTQAKKDKNYARADEIRNDLQNQGIILEDSATGT 454
Query: 557 TWRPA 561
TW+
Sbjct: 455 TWKKG 459
>gi|384142630|ref|YP_005525340.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-ZJ06]
gi|347593123|gb|AEP05844.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-ZJ06]
Length = 473
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/488 (44%), Positives = 304/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S + +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + ++AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQYLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|427828191|ref|ZP_18995209.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|316983974|gb|EFV62953.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
Length = 587
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 294/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 118 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 177
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 178 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 237
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 238 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 297
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 298 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 357
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 358 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 417
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 418 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE-- 465
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ + + F +M+DD T +A L + +N + A RL++L
Sbjct: 466 -AGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVN----KTNDAQLAGRLKALGG----- 515
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 516 -----IIGLLQRDPTEFL----QGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRD 566
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 567 LLNEHKIILEDNAGGTTWR 585
>gi|317126835|ref|YP_004093117.1| cysteinyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
gi|315471783|gb|ADU28386.1| cysteinyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
Length = 466
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/484 (44%), Positives = 293/484 (60%), Gaps = 22/484 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+SRK E +P EGKV MYVCG T Y+ HIG+AR V FD++ RYL++ GYEV Y
Sbjct: 5 VYNTLSRKVEPFQPIEEGKVSMYVCGPTVYNYIHIGNARPAVVFDMVRRYLQYRGYEVQY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+ NFTDVDDKII A E+GED +++ R+ E + +D L PRV++ MP IID
Sbjct: 65 ISNFTDVDDKIIKAAEEMGEDVPTIAERFIEAYFEDTAALGVQKADKHPRVTETMPEIID 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++++ G+AY GDVYF KF YG+LS + ++D + G R+ V +K++P DF LW
Sbjct: 125 FIARLIEKGYAYESQGDVYFRTRKFDGYGKLSHQSIDDLKLGSRIEVGDKKEDPLDFVLW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
KSAKEGE +W+SPWG GRPGWHIECSAM YLG + DIH GG DL FPHHENEIAQS +
Sbjct: 185 KSAKEGEIYWDSPWGNGRPGWHIECSAMVKKYLGDTIDIHAGGQDLSFPHHENEIAQSES 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+YWIHNG++ ID+EKMSKSLGNF + +++ Y P +R F++ HYRSPIN+
Sbjct: 245 LNGKKMANYWIHNGYINIDNEKMSKSLGNFILVHDIIKKYDPEVVRFFIVNAHYRSPINF 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S QL SA + I T + + LS + A L + + T + H FL +M DD
Sbjct: 305 SDEQLTSAKSGLERIKTTYLNVKHRLS--ETANLGEDVEKWT-KDMGVIHTRFLEAMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
++ +AA+ D +K N L+ R+ LE K + ++ VLGL E+
Sbjct: 362 FNSANAVAAMFDLIKLGN--LYLREDHTNKRVLEYFI---KQLDDMSYVLGLTLNKKEEI 416
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
L ++++ I++R ARKN+ + ++D IR L I L D+P GT
Sbjct: 417 L--------------DEEIEVLIQERIDARKNRNFARADEIRDLLKEQNIILEDTPQGTR 462
Query: 558 WRPA 561
W+ A
Sbjct: 463 WKRA 466
>gi|157369409|ref|YP_001477398.1| cysteinyl-tRNA synthetase [Serratia proteamaculans 568]
gi|187631631|sp|A8GAY0.1|SYC_SERP5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157321173|gb|ABV40270.1| cysteinyl-tRNA synthetase [Serratia proteamaculans 568]
Length = 461
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/485 (45%), Positives = 289/485 (59%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE L+ R E H D L P +EPR + H+ I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTTRMLAEMHADFDSLLIERPDIEPRATQHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+++ +++D G AY +GDV FS+D P+YG LS + L+ +AG RV +D K+NP DF
Sbjct: 122 VEITQRLIDRGHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLGYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L + ++A + F F +M
Sbjct: 302 LNYSEENLKQARTALERLYTALRGTD-----VNAQPAGGEV----------FEARFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D + +N L +A L + L +R + VLGL+
Sbjct: 347 DDDFNTPEAYSALFDLAREVNRL--------KAEDLTAANGLAAELRKLAKVLGLLQQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E+ LQ +A ++ E + L I+ R ARK K++ +DA R L + I L D P
Sbjct: 398 PELFLQGGAQA-DDGEVAEIEAL--IKQRNDARKAKDWALADAARDRLNEMNIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|385325019|ref|YP_005879458.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
meningitidis 8013]
gi|261393406|emb|CAX51042.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
meningitidis 8013]
Length = 473
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 295/499 (59%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G++FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE-- 351
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ + + F +M+DD T +A L + +N + A RL++L
Sbjct: 352 -AGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKT----NNAQLAGRLKALGG----- 401
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 402 -----IIGLLQRDPTEFL----QGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|399520526|ref|ZP_10761302.1| cysS [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399111967|emb|CCH37861.1| cysS [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 461
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/487 (45%), Positives = 281/487 (57%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E KP V MYVCG+T YD HIGHARV V FDV+ R+LR GY+V
Sbjct: 3 LSIYNTLSKAKEPFKPLEGNSVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRQRGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L R H+D L L P +EPR + H+ +
Sbjct: 63 TYVRNITDIDDKIIRRANENGEPFEALVERMIAAMHEDEARLSVLRPDIEPRATGHIAGM 122
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED + G R+ VD K++P DF
Sbjct: 123 HQMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLKIGARIEVDEAKEDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP W+SPWG GRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 183 VLWKGVKPGEPSWQSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 243 SEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F A+M
Sbjct: 303 INYSEESLKEAKGALERFYNGLK----------------GLPEAAPAGGEAFVERFGAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L + ++ +N L + LAA K + +VL VL L +
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLRES-----DVQAAAGLAAQLKQLASVLGVLQLEPEAF 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D E L I R AR K + +SD IR L A+G+ L D
Sbjct: 402 ------LQAGAAGKVDAAEVDTL--IAARLQARAEKNWAESDRIRDQLTAMGVVLEDGKG 453
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 454 GTTWRLA 460
>gi|397169815|ref|ZP_10493244.1| cysteinyl-tRNA synthetase [Alishewanella aestuarii B11]
gi|396088598|gb|EJI86179.1| cysteinyl-tRNA synthetase [Alishewanella aestuarii B11]
Length = 459
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/490 (46%), Positives = 293/490 (59%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+SR++E+ P GKVG+YVCG+T YD H+GHAR YV FDV+ RYLR GY+V
Sbjct: 2 LQIYNTLSRQKEVFTPITPGKVGLYVCGITIYDYCHVGHARTYVAFDVINRYLRFCGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE +L+ R+ + H D L LP +EP V+ HM I
Sbjct: 62 TYVRNITDVDDKIIKRAAENGESCDALTARFTQAMHADFKALGLLPADIEPTVTGHMQEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ Q+LD G+AY DGDV F V K+ YG LS + LE +AG RV V K +P DF
Sbjct: 122 ILMVQQLLDKGYAYIAKDGDVLFDVSKYQAYGALSQQNLEMLQAGARVEVSDSKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP+W+SPWG GRPGWHIECSAMSA +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKTAKPGEPYWQSPWGNGRPGWHIECSAMSAKHLGAHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++ WIH G V +D EKMSKSLGNFFT+++V+ Y+ A+R FL+ + YRS
Sbjct: 242 STCAHGHKYVNTWIHTGMVQVDKEKMSKSLGNFFTVKEVLAQYNAEAVRYFLLSSQYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS LE A + +Y AL+D P V N + F A+M
Sbjct: 302 LNYSKENLEQAHAALGRLYN---------------ALRDITPATQVDLNNDYVARFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L L + + +N T K LAA+ +T+ VL +
Sbjct: 347 DDDFNTPEALPVLFELAREVNRFKTTEPAKA-----AELAAVLQTLAGVLGI-------- 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LQ +A ++ ++D+V Q I R AR K++ +DA R +L A+GI L D
Sbjct: 394 ----LQGDAEAFLKSGASDDEVGQIEALIAKRNAARAAKDWAAADAARAELTALGIVLED 449
Query: 552 SPVGTTWRPA 561
T+WR A
Sbjct: 450 KNGVTSWRKA 459
>gi|410628124|ref|ZP_11338853.1| cysteinyl-tRNA synthetase [Glaciecola mesophila KMM 241]
gi|410152346|dbj|GAC25622.1| cysteinyl-tRNA synthetase [Glaciecola mesophila KMM 241]
Length = 464
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/490 (45%), Positives = 301/490 (61%), Gaps = 31/490 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++EL P E KVG+YVCG+T YDLSH+GHAR Y++FD++ RYLRH GY+V
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H+D + L P +EPRV+ HMP I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTSALTERTIAMMHEDFAAIGLLEPDIEPRVTTHMPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ +I +++ G AY+ GDV F V + +YG+LS + L+ G RV VDS K +P DF
Sbjct: 122 VAIIERLIQRGHAYQAKSGDVLFDVSSYADYGKLSKQDLDQLNMGSRVDVDSDKDDPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+ K GEP W SPWG GRPGWHIECSAM+ +LG FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKTVKPGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V +DSEKMSKSLGNFFT+R V++ + LR FL+ HYRS
Sbjct: 242 SCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLQQHDAETLRYFLMSAHYRSQ 301
Query: 375 INYS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
++YS + Q SA ER +Y +L D KA + +D + D +T +K
Sbjct: 302 LSYSENNITQARSALER---LYTSLRDV-KANTRVDMQS------TDYLTRFDK------ 345
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M DD +T +A L D K +N R + E + L + N+ VLG++
Sbjct: 346 -AMDDDFNTPEAMAVLFDVAKELN-----RAKAEGEAGHERASDLAGVLINLGKVLGILQ 399
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
SE L + ++ D ++ I+ R AR K++ +DA R L A+ I L D
Sbjct: 400 RSPSEYL-----QGEQQDDDEVAEIEGLIKARNDARAAKDWAAADAARDALNALNIILED 454
Query: 552 SPVGTTWRPA 561
P GTTWR
Sbjct: 455 GPSGTTWRKG 464
>gi|94676564|ref|YP_588592.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123081502|sp|Q1LTX2.1|SYC_BAUCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|94219714|gb|ABF13873.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 462
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/488 (43%), Positives = 295/488 (60%), Gaps = 28/488 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++ K+E+ KP GKV +YVCGVT YDL HIGH R +VTFDV+ RYLR+ GYEV
Sbjct: 2 LAIFNTLTNKKEIFKPIHIGKVALYVCGVTAYDLCHIGHVRTFVTFDVVIRYLRYCGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y+RN TD++DKII +A GE L+ R E H D+ L+ L P EPR + H+ I
Sbjct: 62 NYIRNITDIEDKIIRKAANNGESCQQLTDRMIAEMHHDLDLLNILRPDKEPRATQHIKEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I + Q++D AY +GDV F+++ YG LS + L + G+RV + + K+NP DF
Sbjct: 122 IQLTRQLIDKEHAYIASNGDVMFAIESANNYGILSSQNLNQLQIGQRVKITTVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAMS YLG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKHGEPTWSSPWGNGRPGWHIECSAMSIKYLGKHFDIHGGGSDLIFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S NN ++++W+H+G VTI +EKMSKSL NFFT+R V++ Y +R FLI +HYR P
Sbjct: 242 STCMENNPYVNFWMHSGMVTICNEKMSKSLSNFFTVRDVLKYYDAETVRYFLISSHYRKP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L + + K+ IP + F F+ +M
Sbjct: 302 LNYSEKSLQLARTALKSLYIALRNTK-----------KEVIP----SGGEYFIEQFMMAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
++D +T A L +N L + ++S + T+R + +LGL+
Sbjct: 347 NNDFNTPAAHAVLFQLAHEVNRL--------KTKNIKSAQGMAATLRYLANILGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
EV LQ ++K + DL + + ++ R RK ++ ++D +R+ LAA+GI L D+P
Sbjct: 398 PEVFLQ-KQKIV--TDLNIALIEELVKQRNNIRKKHQWVQADKVREKLAAMGIVLEDTPQ 454
Query: 555 GTTWRPAL 562
GT WR +
Sbjct: 455 GTIWRRSF 462
>gi|421493946|ref|ZP_15941299.1| CYSS [Morganella morganii subsp. morganii KT]
gi|455740332|ref|YP_007506598.1| Cysteinyl-tRNA synthetase [Morganella morganii subsp. morganii KT]
gi|400191717|gb|EJO24860.1| CYSS [Morganella morganii subsp. morganii KT]
gi|455421895|gb|AGG32225.1| Cysteinyl-tRNA synthetase [Morganella morganii subsp. morganii KT]
Length = 462
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/485 (45%), Positives = 289/485 (59%), Gaps = 27/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FD + RYLRH GY+V
Sbjct: 2 LKIYNTLSRQKEEFKPINPGKIGMYVCGITVYDLCHIGHGRTFVAFDTIVRYLRHAGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y+RN TDVDDKII RANE E L R E H+D ++ + P EPR + H+ I
Sbjct: 62 NYIRNITDVDDKIIRRANENNETCDQLVDRMVAEMHRDFDAMNLMRPDSEPRATHHIKEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +LD G AY D GDV F + PEYG LS + LE +AG RV V K+NP DF
Sbjct: 122 IEITQLLLDRGHAYVADNGDVMFDISSDPEYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSL NFFTIR V+ Y P +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLGYYDPETVRYFLLSAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + Y L +K DAA + + +F N F +M
Sbjct: 302 LNYTEENLKQARTALERFYTALRGTDK-----DAAVVVNE----------EFANRFRDAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L K++ M + L +R + VLGL++
Sbjct: 347 DDDFNTPEAYSVLFDMARELNRL------KQEDM--TAANGLAAQLRQLAGVLGLLTQDP 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L+ A +D ++ I+ R AR +KE+ +DA R L +GI L D P
Sbjct: 399 EQF---LQSGAQSESDEDAAKIEALIKQRNDARASKEWALADAARDALTDMGIVLEDGPQ 455
Query: 555 GTTWR 559
GTTWR
Sbjct: 456 GTTWR 460
>gi|424060453|ref|ZP_17797944.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab33333]
gi|404668405|gb|EKB36314.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab33333]
Length = 473
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/488 (44%), Positives = 302/488 (61%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI ++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVTKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S + +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + + AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|421808496|ref|ZP_16244343.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC035]
gi|410415644|gb|EKP67429.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC035]
Length = 473
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/488 (44%), Positives = 303/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ ++ EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEKYVNYWMHVGFINVNGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S I +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSF-------IERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLL-QLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + + AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSNIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|331268391|ref|YP_004394883.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
gi|329124941|gb|AEB74886.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
Length = 472
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/488 (40%), Positives = 295/488 (60%), Gaps = 21/488 (4%)
Query: 72 ASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHL 131
++ L+NTM+R++E KP +G+V MYVCG T Y+ HIG+ R ++ FD + RY +
Sbjct: 3 GGNKMKLFNTMTRQKEEFKPIKDGEVNMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYK 62
Query: 132 GYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDH 191
GY+V +++NFTD+DDK+I +ANE L R+ EE+++D L+ +V PR ++
Sbjct: 63 GYKVNFIQNFTDIDDKMIKKANEENITVKELGDRFIEEYYKDSDGLNIKRATVNPRATEF 122
Query: 192 MPHIIDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNP 251
M I+ + ++D G+AY+VDGDVYFS KF EYG+LSG+ LED +AG R+ VD RK++P
Sbjct: 123 MDEIVAFVKDLIDKGYAYKVDGDVYFSTKKFTEYGKLSGQNLEDLQAGARITVDERKQDP 182
Query: 252 ADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
DFA+WK+ K GEP WESPWG GRPGWHIECS M+ LG + DIH GG DLVFPHHENE
Sbjct: 183 MDFAIWKNEKPGEPSWESPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPHHENE 242
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + +YW+H+ ++ I+++KMSKSL NFFT R+++E Y +RLF++ HY
Sbjct: 243 IAQSEARNGKAFANYWMHSAYLNINNKKMSKSLNNFFTTREILERYDAEVIRLFMLSAHY 302
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
R+P+N+S LESA +Y ++ + E+ L + + + + +N + ++
Sbjct: 303 RTPLNFSDELLESAKASNERLYNSIGNLERLLDEVKIEKMTED-EKEYTKVLNSYKEKYI 361
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
M DD +T +A + D +K IN H + + SL + IR + LG++
Sbjct: 362 EKMDDDFNTADAIAVIFDLIKEIN--THVNADSSKELVNYSL----EIIRELGMPLGILQ 415
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+L L ++ IE R ARK++ + +D IR DL A GI L D
Sbjct: 416 KS---TMLDLNA-----------EIEGLIEQRQQARKDRNWALADKIRDDLKARGIVLED 461
Query: 552 SPVGTTWR 559
+P G W+
Sbjct: 462 TPQGVRWK 469
>gi|121996916|ref|YP_001001703.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
gi|187629827|sp|A1WT89.1|SYC_HALHL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|121588321|gb|ABM60901.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
Length = 459
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/488 (44%), Positives = 291/488 (59%), Gaps = 37/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++N+++ +E +P G+V +YVCG+T YD H+GHAR V FD + RYLR LGYEV
Sbjct: 2 LKIHNSLTGAKEPFQPIEPGQVRIYVCGMTVYDFCHLGHARALVVFDAVVRYLRWLGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R+ H+D L PP EPR ++ + +
Sbjct: 62 TYVRNITDIDDKIIRRAAENGEPMTALTDRFIRAMHEDCSALGVEPPDHEPRATERLESM 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I +I +++ G AY D GDVYFSV FPEYG+LSGR++E+ R+G R+ D K +P DF
Sbjct: 122 IALIEELIAGGHAYVGDNGDVYFSVASFPEYGKLSGRRVEELRSGSRIEPDEAKHDPVDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W SPWG GRPGWHIECSAMS LG FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKAAKSGEPAWPSPWGDGRPGWHIECSAMSRDLLGSHFDIHGGGVDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + ++YW+HNG V ID EKM+KSLGNFFT+R V+ + +RLFL+ +HYRSP
Sbjct: 242 SECASGHRFVNYWMHNGHVRIDDEKMAKSLGNFFTVRDVLAEHPAEVVRLFLLSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + +Y L P + ++ F +M
Sbjct: 302 LNYTGDALDEARGGLERLYNALRGL-----------------PAAAPARSQARERFREAM 344
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA L D + IN L ++A A+ +R + VLG
Sbjct: 345 DDDFNTREALAVLFDGAREINRL-------REAGDASGAASAAAELRELGAVLG------ 391
Query: 495 SEVLLQLREKALKRADLTE---DQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LLQ +A R D+ + +++ + RT ARK K++ ++D IR +L A GI L D
Sbjct: 392 ---LLQQDPEAYLRGDVADAEAEEIESLVAQRTAARKAKDFAEADRIRDELQARGIELED 448
Query: 552 SPVGTTWR 559
+P GT WR
Sbjct: 449 TPEGTKWR 456
>gi|421675648|ref|ZP_16115568.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC065]
gi|421693049|ref|ZP_16132696.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-116]
gi|404559102|gb|EKA64374.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-116]
gi|410381910|gb|EKP34471.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC065]
Length = 473
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/488 (43%), Positives = 303/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S + +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + ++ L L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQEVLA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|261364077|ref|ZP_05976960.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
gi|288568121|gb|EFC89681.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
Length = 473
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/499 (43%), Positives = 293/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + AAA D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTP-------AAAF------DLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAHLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KVLGGIIGLLQRDPTEFL----QGGAVSDGLSNEEIDDLIAQRKQARADKNWAESDRIRN 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNADGTTWR 471
>gi|421556545|ref|ZP_16002460.1| cysteine--tRNA ligase [Neisseria meningitidis 80179]
gi|402337218|gb|EJU72468.1| cysteine--tRNA ligase [Neisseria meningitidis 80179]
Length = 473
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 292/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+ K GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKATKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + AAA D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTP-------AAAF------DLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAQLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPTEFL----QGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|345858483|ref|ZP_08810876.1| cysteinyl-tRNA synthetase [Desulfosporosinus sp. OT]
gi|344328502|gb|EGW39887.1| cysteinyl-tRNA synthetase [Desulfosporosinus sp. OT]
Length = 455
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/465 (43%), Positives = 298/465 (64%), Gaps = 16/465 (3%)
Query: 97 VGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELG 156
+ MYVCG T Y+ H G+ R++V FD++ RY + GY+V Y++NFTDVDDKII R
Sbjct: 1 MAMYVCGPTTYNYFHAGNGRMFVVFDMIRRYFMYKGYDVRYIQNFTDVDDKIIQRGKVEE 60
Query: 157 EDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVY 216
DP++L ++Y EE+ +D +L+ LP ++ P+ ++H+P +I++I +++ NG AY DGDVY
Sbjct: 61 MDPLALGQKYIEEYFKDAKELNLLPATIHPKATEHIPEMIEIIQELVSNGLAYETDGDVY 120
Query: 217 FSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRP 276
F+VD FP YG+LSGR LED +AG RV VD RK +P DFALWK AK EPFWESPWG GRP
Sbjct: 121 FAVDHFPNYGKLSGRTLEDMKAGARVEVDERKHHPMDFALWKKAKPEEPFWESPWGNGRP 180
Query: 277 GWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNNSHIS-YWIHNGFVTI 335
GWHIEC+AMS YLG FD+HGGG DLVFPHHENEIAQ+ + YW+HN F+TI
Sbjct: 181 GWHIECTAMSLKYLGSGFDVHGGGEDLVFPHHENEIAQTEGYLKGQTFAHYWMHNAFLTI 240
Query: 336 DSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQT 395
+ EKMSKSLGNFFTIR+++ + +R +L+GTHYRSP++++ L A + + ++ +
Sbjct: 241 NQEKMSKSLGNFFTIRELLAKFSGEVIRFYLLGTHYRSPLDFNDQNLVMAQKGLERLHTS 300
Query: 396 LHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTIN 455
+ ++AL + ++ + I + + + F +M DD ++ + AAL + KT+N
Sbjct: 301 IRLAQEALD-REGSSSNEQIEAELFKAAKEAREAFEKAMDDDFNSALAYAALFELAKTMN 359
Query: 456 DLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQ 515
+ E+LA +KT+ + VLG+ +S ++ ++ LK Q
Sbjct: 360 GCVQENPAPS-----EALATAQKTLLELGGVLGI-DLLHSVLVPAANDETLK-------Q 406
Query: 516 VLQRI-EDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWR 559
V++ + + R+ +R+ K++E +D IR L GI + D+P G W+
Sbjct: 407 VMEVVLQIRSRSRQKKDWEMADFIRDALKDKGIVIEDTPQGARWQ 451
>gi|336449929|ref|ZP_08620386.1| cysteinyl-tRNA synthetase [Idiomarina sp. A28L]
gi|336283086|gb|EGN76293.1| cysteinyl-tRNA synthetase [Idiomarina sp. A28L]
Length = 460
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/486 (44%), Positives = 296/486 (60%), Gaps = 31/486 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN++++++E KP G+V +YVCGVT YDL HIGHAR YV FDV+ RYLR+LGY+V
Sbjct: 2 LKLYNSLTQRKEEFKPIQAGEVKLYVCGVTIYDLCHIGHARTYVAFDVIVRYLRYLGYQV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TDVDDKII RA E E S++ R+ H D L+ + P +EPRV+ HM I
Sbjct: 62 TFVRNVTDVDDKIIRRAAENNESIDSITERFLGYMHDDFRALNLVEPDIEPRVTTHMQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID++ Q+++ AY GDV F V FPEYG+LSG+ LE +AG RVAV K++ DF
Sbjct: 122 IDLVAQLVEKKHAYVASSGDVLFDVSSFPEYGRLSGQNLEQLQAGARVAVTEGKQDQMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK EP WESPWG GRPGWHIECSAM+ +LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKRAKADEPSWESPWGAGRPGWHIECSAMNGKHLGKHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V ++ EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVQVNQEKMSKSLGNFFTIRDVLASYAAETVRFFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + IY + + +A++++S ++N
Sbjct: 302 LNYSEAHLDQAHASLERIYTAMRGINAETA---SASVRESYEARIREALN---------- 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAA-LEKTIRNVLTVLGLMSTG 493
DD + ++ + + + +N +Q +SLAA L ++ +LG++
Sbjct: 349 -DDFNVPEAMSVIFEITREVN---------RQRSENKSLAAELVFLLQEYGAILGILQQQ 398
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L + + +++ + + L IE R AR+ K++ +DA R +L A+GI L D+
Sbjct: 399 PDEFL----KGSEDDSEVAKIEAL--IEQRNSAREAKDWAGADAARDELQALGIVLEDTA 452
Query: 554 VGTTWR 559
GT WR
Sbjct: 453 EGTLWR 458
>gi|421907821|ref|ZP_16337690.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha704]
gi|393291136|emb|CCI73697.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha704]
Length = 699
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/499 (43%), Positives = 290/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 230 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 530 VVRFFILRAHYRSPLNYSDTHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 576
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 577 ENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAQLAGCL 622
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ + L + L+ +++ I R AR +K + +SD IR
Sbjct: 623 KALGGIIGLLQRDPTAFL----QGGAASDGLSNEEIEDLIAQRKQARADKNWAESDRIRD 678
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 679 LLNEHKIILEDNAGGTTWR 697
>gi|390960204|ref|YP_006424038.1| cysteinyl-tRNA synthetase [Thermococcus sp. CL1]
gi|390518512|gb|AFL94244.1| cysteinyl-tRNA synthetase [Thermococcus sp. CL1]
Length = 451
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/461 (44%), Positives = 274/461 (59%), Gaps = 14/461 (3%)
Query: 99 MYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGED 158
MYVCG T YD +H+GHAR YV FDV+ RYL H GY V V NFTD+DDKII RANE GED
Sbjct: 1 MYVCGPTVYDYTHLGHARTYVAFDVIRRYLEHRGYTVLMVMNFTDIDDKIIKRANETGED 60
Query: 159 PISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRVDGDVYFS 218
P L+ R+ F +DM L P + PRV++HM II+ + ++ + G+AY VYF
Sbjct: 61 PKELAERFLRYFLEDMRALKVKPADIYPRVTEHMEDIIEFVRKLQEKGYAYEGSDGVYFE 120
Query: 219 VDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGW 278
V KF +YG+LS KLED G RV K+NP DFALWK AK GEP W SPWG GRPGW
Sbjct: 121 VRKFKDYGKLSKIKLEDLVKGARVEPGEGKRNPEDFALWKKAKPGEPKWSSPWGEGRPGW 180
Query: 279 HIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSE 338
HIECS MS YLG SFDIHGGG DL+FPHHENEIAQS A + + YW+H GF+ ++ E
Sbjct: 181 HIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQSEACTGHEWVRYWLHTGFLMVNGE 240
Query: 339 KMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHD 398
KMSKSLGNF TIR+++E Y P +RLF++ HYRSP++Y+ +E A + +Y TL +
Sbjct: 241 KMSKSLGNFVTIREMLERYDPEVIRLFILQRHYRSPLDYTEEGMEHAKNNLERLYNTLEN 300
Query: 399 CEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLL 458
A+ + + + + + +I F +M DD +T L A+ + +N L
Sbjct: 301 IRVAMERAEISFRWEKLEFEAYEAIRDAGRKFYEAMDDDFNTAEALKAVFEASNAVNRYL 360
Query: 459 HTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQ 518
+ K+++ L + R V V G+ + E +RA E+ +
Sbjct: 361 TEVETPKESV----LRKAWEFFRIVSEVFGIFEDYFRE----------QRAGEEEELIRL 406
Query: 519 RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWR 559
I+ R RK + + +D IR +L +GI L D+P GT W+
Sbjct: 407 LIDVRAQLRKERNFALADRIRDELRNLGIQLEDTPQGTVWK 447
>gi|339494031|ref|YP_004714324.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|338801403|gb|AEJ05235.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 462
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/487 (46%), Positives = 287/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E +P KV MYVCG+T YD HIGHARV V FDV+ R+LRH GY+V
Sbjct: 4 LAIYNTLSKAKEPFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYDV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA+E GE +L R H+D L+ L P VEPR +DH+ +
Sbjct: 64 TYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDETRLNVLRPDVEPRATDHIAGM 123
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D GFAY +GDVY+ V KF YG+LS RK+ED + G R+ VD K++P DF
Sbjct: 124 HTMIQTLIDKGFAYAPGNGDVYYRVGKFAGYGKLSRRKIEDLKIGARIEVDEAKEDPLDF 183
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W+SPWGPGRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 184 VLWKGAKPGEPSWDSPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 243
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 244 SEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSP 303
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P ++F F A+M
Sbjct: 304 INYSEDSLREAKSALERFYNGLK----------------GLPEAQPAGGDEFVARFAAAM 347
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L + ++ +N L + +LAA K + VL VL L +
Sbjct: 348 DDDFNSPEGCAVLFEMIREVNRLRES-----DLTAAAALAARLKELAGVLGVLQLEPGAF 402
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D E + L A KN + +SD IR L A+G+ L D
Sbjct: 403 ------LQAGAAGKVDAAEVEALIAARLAARAEKN--WGESDRIRDQLTAMGVVLEDGKG 454
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 455 GTTWRLA 461
>gi|308050311|ref|YP_003913877.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
gi|307632501|gb|ADN76803.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
Length = 460
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/488 (45%), Positives = 295/488 (60%), Gaps = 35/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP GKVGMYVCGVT YD HIGHAR YV FD + RYLR G +V
Sbjct: 2 LQIFNTLTRQKEAFKPIQPGKVGMYVCGVTIYDYCHIGHARTYVAFDTMVRYLRSQGLDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E +L R+ E +QD L+ L P +EP V+ HM I
Sbjct: 62 TYVRNITDVDDKIIRRAAENNESCEALVARFTEAMYQDFDALNLLRPDIEPTVTGHMAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID+I +++ G AY D GDV+F V F +YG+LS + LE ++G RV VD K+NP DF
Sbjct: 122 IDIIQTLVNKGHAYVTDAGDVWFEVKTFDDYGKLSRQDLEQLQSGARVEVDESKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWKSAK GEP W SPWG GRPGWHIECSAM+ +LG FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 ALWKSAKPGEPSWTSPWGEGRPGWHIECSAMNGKHLGKVFDIHGGGSDLMFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + ++++YW+H+G V ++ EKMSKSL NFFTIR+V++ Y ++R FL+ +HYRS
Sbjct: 242 SCCAHDTNYVNYWVHSGMVQVNKEKMSKSLNNFFTIREVLKQYQAESVRYFLLSSHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y AL+ P + N F A+M
Sbjct: 302 LNYSEENLNQAHAALERLY---------------TALRGVTPATELNLDNDHVARFQAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T L L D + +N K+ E A L +R + V+G
Sbjct: 347 NDDFNTAEALPVLFDLARELNI-------TKEDGESEQAAQLAGLMRYLGGVMG------ 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LL+ +A + +D+V + I+ R AR +K++ +DA R +L A+GI L D
Sbjct: 394 ---LLEQAPEAFLQGGGDDDEVAKIEGLIKARNDARASKDWAAADAARDELTAMGIVLED 450
Query: 552 SPVGTTWR 559
GT+WR
Sbjct: 451 GAGGTSWR 458
>gi|383753596|ref|YP_005432499.1| putative cysteinyl-tRNA synthetase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365648|dbj|BAL82476.1| putative cysteinyl-tRNA synthetase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 475
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/494 (42%), Positives = 298/494 (60%), Gaps = 28/494 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNTMSR +E KP EG+ +Y CGVTPY+ HIG+AR +VT+DV+ RYL H GY+V
Sbjct: 2 LKVYNTMSRSKEEFKPLKEGEASIYCCGVTPYNHPHIGNARPFVTWDVIRRYLAHKGYKV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
Y++NFTDVDDKII ANE G +S RY + + + M L+ + PRVS+ +P I
Sbjct: 62 RYIQNFTDVDDKIIRTANEEGVKWSDISGRYIDAYFKAMDALNVKRADIYPRVSETIPDI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ +++D G+AY VD GDV++ V+KF YG+LSGRKLED +AG R+ VD RK++P DF
Sbjct: 122 IAMVQKLVDKGYAYAVDNGDVFYRVEKFAGYGKLSGRKLEDMQAGARIDVDERKEHPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK+AK GEP W+SPWG GRPGWHIECS MS YLG FD HGGG DL+FPHHENEIAQ
Sbjct: 182 ALWKAAKPGEPSWDSPWGKGRPGWHIECSTMSLKYLGEKFDFHGGGSDLIFPHHENEIAQ 241
Query: 315 SCAACNNSH--ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYR 372
S A + H YW+HNGF+TI +EKMSKS NFFT++ ++ Y +R F++ THYR
Sbjct: 242 SQACIGDEHSFAQYWLHNGFITIHNEKMSKSKNNFFTVKDILAEYPGEVVRFFILQTHYR 301
Query: 373 SPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLA 432
SP+++S +L+ A + + Q+ ++ L+ + + + +FH
Sbjct: 302 SPLDFSDERLKEAQTSLNRLAQSKGFMDELLAKAGKSDTAKELADKAAGYVKEFHE---- 357
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T + ++ + K IN K A E+ A + + + + ++G+
Sbjct: 358 AMDDDFNTALAISQIFALSKDINIYYQDVMNKGTAFDSENFAKVAEAYKLMTGIIGI--- 414
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIED-----RTVARKNKEYEKSDAIRKDLAAVGI 547
++ + +D + ++ D R ARK K + +D IR +L G+
Sbjct: 415 -------------FEQEEAADDGLANKLMDLIINIRQDARKEKNWALADKIRDELKEAGV 461
Query: 548 ALMDSPVGTTWRPA 561
L D+P G W+ A
Sbjct: 462 ILEDTPQGVRWKKA 475
>gi|170733433|ref|YP_001765380.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
gi|229558621|sp|B1JUK8.1|SYC_BURCC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169816675|gb|ACA91258.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
Length = 465
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/491 (45%), Positives = 299/491 (60%), Gaps = 38/491 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R +++ P+ G+V MYVCG+T YD H+GHAR+ V FD++ R+LR +GY V
Sbjct: 4 LRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYRV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+ R+ H+D L P VEPR + +P +
Sbjct: 64 TYVRNITDIDDKIIRRAVENGETIKSLTDRFIGAMHEDETALGIQRPDVEPRATQFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI + NG+AY+ DGDV +SV KF +YG+LSG+ L+D RAGERVA + K++P DF
Sbjct: 124 LGMIETLETNGYAYQAADGDVNYSVRKFADYGKLSGKSLDDLRAGERVAANDAKQDPLDF 183
Query: 255 ALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AKE EP W S +G GRPGWHIECSAM + LG+ FDIHGGG DL FPHHENE
Sbjct: 184 VLWKRAKEDEPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGFV +D+EKMSKSLGNFFTIR+V+E Y +R F++ THY
Sbjct: 244 IAQSEGATGETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVVRFFIVRTHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVT-SINKFHND- 429
RSP+NYS V L+ A + +Y L D E PDT+ N+ H
Sbjct: 304 RSPLNYSDVHLDDARASLTRLYTALKDVE----------------PDTLALDWNEPHGQR 347
Query: 430 FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGL 489
F A+M+DD +T V +A L + +N R SLA K + +L +LG
Sbjct: 348 FAAAMNDDFNTPVAVATLFELAGEVN-----------RTRDASLARQLKQLAGLLGLLGR 396
Query: 490 MSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
+ + + AD E Q+ R+ A++ K+Y ++D IR +L GIAL
Sbjct: 397 EPRAFLQQASGAAQAGGLAADEIEAQIAARV----AAKQAKDYAEADRIRAELLEAGIAL 452
Query: 550 MDSPVGTT-WR 559
D P G+T WR
Sbjct: 453 EDKPGGSTEWR 463
>gi|162139463|ref|YP_001172566.2| cysteinyl-tRNA synthetase [Pseudomonas stutzeri A1501]
gi|187631654|sp|A4VL73.2|SYC_PSEU5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 461
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/487 (46%), Positives = 287/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E +P KV MYVCG+T YD HIGHARV V FDV+ R+LRH GY+V
Sbjct: 3 LAIYNTLSKAKEPFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA+E GE +L R H+D L+ L P VEPR +DH+ +
Sbjct: 63 TYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDETRLNVLRPDVEPRATDHIAGM 122
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D GFAY +GDVY+ V KF YG+LS RK+ED + G R+ VD K++P DF
Sbjct: 123 HTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKEDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W+SPWGPGRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 183 VLWKGAKPGEPSWDSPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 243 SEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P ++F F A+M
Sbjct: 303 INYSEDSLREAKSALERFYNGLK----------------GLPEAQPAGGDEFVARFAAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L + ++ +N L + +LAA K + VL VL L +
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLR-----EADLAAAAALAARLKVLAGVLGVLQLEPDAF 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D E + L A KN + +SD IR L A+G+ L D
Sbjct: 402 ------LQAGAAGKVDAAEVEALIAARLAARAEKN--WGESDRIRDQLTAMGVVLEDGKG 453
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 454 GTTWRLA 460
>gi|440229808|ref|YP_007343601.1| cysteinyl-tRNA synthetase [Serratia marcescens FGI94]
gi|440051513|gb|AGB81416.1| cysteinyl-tRNA synthetase [Serratia marcescens FGI94]
Length = 461
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/485 (46%), Positives = 286/485 (58%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY++
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE L+ R E H D L P EPR + H+ I
Sbjct: 62 NYVRNVTDVDDKIIRRAAENGETCDQLTGRMLAEMHADFDALLIERPDQEPRATQHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ ++L+ AY +GDV FS+D P+YG LS + LE +AG RV +D K+NP DF
Sbjct: 122 IEITQRLLERDHAYVASNGDVMFSIDSDPQYGLLSRQDLEQLQAGARVEIDDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTIRDVLGYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL+ + P F F +M
Sbjct: 302 LNYSEENLKQARASLERLY---------------TALRGTDPAAQPAGGEAFEARFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D + +N L AM E +R + VLGL+
Sbjct: 347 DDDFNTPEAYSALFDLAREVNRLKSEDMAAANAMAAE--------LRKLANVLGLLQQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A ++ E + L I+ R ARK+KE+ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDGEVAEIEAL--IKQRNDARKSKEWALADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|336123884|ref|YP_004565932.1| cysteinyl-tRNA synthetase [Vibrio anguillarum 775]
gi|335341607|gb|AEH32890.1| Cysteinyl-tRNA synthetase [Vibrio anguillarum 775]
Length = 460
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/489 (44%), Positives = 295/489 (60%), Gaps = 37/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP KVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNSITRQKEEFKPIHANKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R + H D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIADMHADFDALNMKRPDVEPRATAYIQEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY +GDV F V+KF EYG+LS + L+ +AG R+ VD K++P DF
Sbjct: 122 IGLVQRLIERGFAYVASNGDVMFEVNKFDEYGKLSKQDLDQLQAGARIDVDLAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM++A LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGEGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L + L L A V ++ + F +M
Sbjct: 302 LNYSEDNLKQARASLERLYTAL----RGLDLTVA-----------VAGGEEYVSRFSIAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L + L+ +AL +R + V+G
Sbjct: 347 NDDFNTPEAYSVLFDMARDINKL--------KTENLQQASALGALMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L +A + D D+ + IE R +R K++ +D R L +GI L
Sbjct: 393 ---ILHQDPEAFLKGDANGDEQVAEIEALIKLRNDSRAAKDWANADVARDKLNELGIILE 449
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 450 DGPSGTTWR 458
>gi|385800588|ref|YP_005836992.1| cysteinyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
gi|309389952|gb|ADO77832.1| cysteinyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
Length = 483
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/481 (41%), Positives = 298/481 (61%), Gaps = 9/481 (1%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++ ++E KP + KV MYVCG+T + SHIGH R + +DV+ R+L +LGY+V Y
Sbjct: 4 VYNTLTGEKEEFKPVEKDKVKMYVCGLTVQNYSHIGHIRSVINYDVIRRFLEYLGYQVDY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+ NFTD+++KI+ RA E P +L+ +Y F +D+ + + P RVS+++ II+
Sbjct: 64 ISNFTDINEKIVQRAAEEDLKPAALANKYANAFLEDLREFNVKPADKYLRVSENVAEIIE 123
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
M+T +++ G+AY V+G+VYFSV+ F +YG+LSGR L++ +AG R+AV+ K+NP DF LW
Sbjct: 124 MVTTLIEKGYAYEVNGNVYFSVESFADYGKLSGRNLDEMQAGARIAVNKEKRNPLDFGLW 183
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K E E W+SPWG G PGWHIECSAMS LG +FDIHGGG+DL+FPHHENEIAQS A
Sbjct: 184 KKV-ESETGWDSPWGEGWPGWHIECSAMSMKRLGSTFDIHGGGVDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ ++YW+HNG V + EKMSKS GNFFT R+V++ + +R FL+ HYRSPI++
Sbjct: 243 YSDQKFVNYWLHNGTVNLSGEKMSKSQGNFFTSREVLKEFSAEVVRYFLLTRHYRSPIDF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S +LE A+ + I T K LSL +A ++ I + +I +F+A++ DD
Sbjct: 303 SYEKLEEAATSLTRIKNTRKQLAKVLSLDINSAAENKIEQEFFENIISKKKEFIAALKDD 362
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T + + D IN ++ ++ L EK ++ +LGL
Sbjct: 363 FNTAEAIGVIHDLAGEINSYINRKEFDLNEKNFALLTKTEKIFLELIEILGLE------- 415
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
+L + ++L V I+ R AR+NK ++++D IR L +GI ++DSP GT
Sbjct: 416 -FKLESASESESELVSPLVNLLIKLRNKARENKNWQEADLIRDQLEEIGIEVIDSPHGTE 474
Query: 558 W 558
W
Sbjct: 475 W 475
>gi|88860441|ref|ZP_01135079.1| cysteinyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
gi|88817639|gb|EAR27456.1| cysteinyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
Length = 459
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/488 (44%), Positives = 284/488 (58%), Gaps = 36/488 (7%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E KP V GK+ MYVCG+T YD H+GHAR YV+FDV+ RY RHLGY+V Y
Sbjct: 4 IYNTLTRQKEQFKPMVAGKISMYVCGITIYDYCHVGHARTYVSFDVMNRYFRHLGYDVTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TDVDDKII RA+E E+ L+ R + H+D L+ LP +EP V+ H+P II
Sbjct: 64 VRNITDVDDKIIKRAHENNEEINDLTVRMTKAMHEDFNALNMLPADIEPTVTGHIPEIIT 123
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
M+ ++++ G AY +GDV F V F YG LS + L +AG RV VD K +P DF L
Sbjct: 124 MVERLIEKGHAYIAGNGDVLFDVSTFAAYGALSQQDLSMLQAGARVEVDMGKDDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK EP W SPWG GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHENEIAQSC
Sbjct: 184 WKKAKPEEPSWGSPWGAGRPGWHIECSAMSSKHLGDHFDIHGGGSDLQFPHHENEIAQSC 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A +++ WIH G V ++ EKMSKSL NFFT+R+V++ Y +R FLI HYRS +N
Sbjct: 244 CASGQKYVNTWIHTGMVQVNKEKMSKSLNNFFTVREVLKQYDRETVRFFLINGHYRSQLN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L+ A + IY AL+ P + N++ F +M+D
Sbjct: 304 YSQENLDQARSSLERIY---------------TALRGVTPTPVDLAANEYVAKFRQAMND 348
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T L + + K IN + + K A L ++ + VLG+
Sbjct: 349 DFNTPEALPVVFELAKEINRVKDSDSSKA--------AELAFVLKAITEVLGIA------ 394
Query: 497 VLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
Q ++ + + ED+V Q I R AR +K + +D R L A+ I L DS
Sbjct: 395 ---QQEPESFLQGNQDEDEVAQIEALIAQRNQARADKNWALADDARDKLNAMNIILEDSA 451
Query: 554 VGTTWRPA 561
TTWR A
Sbjct: 452 GKTTWRKA 459
>gi|421545409|ref|ZP_15991472.1| cysteine--tRNA ligase [Neisseria meningitidis NM140]
gi|421547458|ref|ZP_15993493.1| cysteine--tRNA ligase [Neisseria meningitidis NM183]
gi|421549491|ref|ZP_15995504.1| cysteine--tRNA ligase [Neisseria meningitidis NM2781]
gi|421551603|ref|ZP_15997590.1| cysteine--tRNA ligase [Neisseria meningitidis 69166]
gi|421553643|ref|ZP_15999602.1| cysteine--tRNA ligase [Neisseria meningitidis NM576]
gi|421567919|ref|ZP_16013650.1| cysteine--tRNA ligase [Neisseria meningitidis NM3001]
gi|433472311|ref|ZP_20429687.1| cysteine--tRNA ligase [Neisseria meningitidis 68094]
gi|433478638|ref|ZP_20435944.1| cysteine--tRNA ligase [Neisseria meningitidis 70012]
gi|433527099|ref|ZP_20483716.1| cysteine--tRNA ligase [Neisseria meningitidis 69096]
gi|433539845|ref|ZP_20496309.1| cysteine--tRNA ligase [Neisseria meningitidis 70030]
gi|402320768|gb|EJU56249.1| cysteine--tRNA ligase [Neisseria meningitidis NM183]
gi|402320956|gb|EJU56436.1| cysteine--tRNA ligase [Neisseria meningitidis NM140]
gi|402323198|gb|EJU58644.1| cysteine--tRNA ligase [Neisseria meningitidis NM2781]
gi|402326610|gb|EJU62009.1| cysteine--tRNA ligase [Neisseria meningitidis 69166]
gi|402327463|gb|EJU62851.1| cysteine--tRNA ligase [Neisseria meningitidis NM576]
gi|402342864|gb|EJU78020.1| cysteine--tRNA ligase [Neisseria meningitidis NM3001]
gi|432206264|gb|ELK62273.1| cysteine--tRNA ligase [Neisseria meningitidis 68094]
gi|432212918|gb|ELK68849.1| cysteine--tRNA ligase [Neisseria meningitidis 70012]
gi|432257916|gb|ELL13208.1| cysteine--tRNA ligase [Neisseria meningitidis 69096]
gi|432270890|gb|ELL26023.1| cysteine--tRNA ligase [Neisseria meningitidis 70030]
Length = 473
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 295/499 (59%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE-- 351
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ + + F +M+DD T +A L + +N + A RL++L
Sbjct: 352 -AGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVN----KTNDAQLAGRLKALGG----- 401
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
++GL+ +E L + + L+ +++ I R AR +K + +SD IR
Sbjct: 402 -----IIGLLQRDPTEFL----QGSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|334705447|ref|ZP_08521313.1| cysteinyl-tRNA synthetase [Aeromonas caviae Ae398]
Length = 458
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/490 (45%), Positives = 294/490 (60%), Gaps = 37/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YD HIGH R +V FDV+ RYLR+ GY++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E L+ R + HQD L + P +EPR + H+ I
Sbjct: 62 TYVRNVTDVDDKIIKRAAETHVTCDDLTERLIGDMHQDFDALGMVRPDIEPRATQHIGEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ +L+ G AY D GDV F V+ + +YG+LSG+ LE +AG RV V K+NP DF
Sbjct: 122 IALVETLLEKGHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W+SPWGPGRPGWHIECSAM++ +LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L D L L AA + + F +M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRD----LPLAAAAGGDEQVAR------------FKEAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D ++ IN +++A + A L +R + VLG
Sbjct: 346 DDDFNTPEAYSALFDLVREIN--------RQKAEDMAVAAGLGARLRELGAVLG------ 391
Query: 495 SEVLLQLREKALKRADLTEDQV--LQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+LQ +A + D +++V ++R I +R AR +K + +DA R L +GI L D
Sbjct: 392 ---ILQQDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMGIVLED 448
Query: 552 SPVGTTWRPA 561
S T+WR A
Sbjct: 449 SAGKTSWRRA 458
>gi|445443240|ref|ZP_21442575.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-92]
gi|444762811|gb|ELW87163.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-92]
Length = 473
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/488 (43%), Positives = 303/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI ++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVTKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VM+ +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMDKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S + +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + ++AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|294671003|ref|ZP_06735859.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307490|gb|EFE48733.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 473
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/501 (43%), Positives = 292/501 (58%), Gaps = 48/501 (9%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++RK+E P V MYVCG+T YD H+GHARV V FD++ R+LR GY +
Sbjct: 2 LTIYNTLTRKKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQM 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAG+RV VD K++P DF
Sbjct: 122 IAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGKRVEVDGFKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYH 358
S A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y
Sbjct: 242 SVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYD 301
Query: 359 PLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPD 418
P +R F++ HYRSP+NYS L+ A + +Y TL + A L A
Sbjct: 302 PEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFELSENA-------- 353
Query: 419 TVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEK 478
N + F A+M+DD T +A L + +N + A L
Sbjct: 354 -----NDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAHLAG 394
Query: 479 TIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAI 538
++ + ++GL+ +E L + L+ +++ I R AR +K + +SD I
Sbjct: 395 CLKALGGIIGLLQRDPTEFL----QGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRI 450
Query: 539 RKDLAAVGIALMDSPVGTTWR 559
R L I L D+ GTTWR
Sbjct: 451 RDLLNEHKIILEDNAGGTTWR 471
>gi|383935040|ref|ZP_09988478.1| cysteinyl-tRNA synthetase [Rheinheimera nanhaiensis E407-8]
gi|383703805|dbj|GAB58569.1| cysteinyl-tRNA synthetase [Rheinheimera nanhaiensis E407-8]
Length = 459
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/485 (47%), Positives = 289/485 (59%), Gaps = 30/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+SRK+EL P V GK G+YVCG+T YD H+GHAR YV FDV+ RYLR LGY+V
Sbjct: 2 LQIYNTLSRKKELFTPIVPGKAGLYVCGITIYDYCHVGHARTYVAFDVINRYLRFLGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E +L+ R+ + H D L +P +EPRV+ HM I
Sbjct: 62 TYVRNITDVDDKIIKRAAENNESCDALTARFTKAMHADFNALGLMPADIEPRVTTHMAEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI Q+L G+AY DGDV F V K+ YG+LS + L+ +AG RV V K +P DF
Sbjct: 122 IQMIEQLLAKGYAYVAADGDVLFDVSKYEAYGELSQQNLDMLQAGARVNVAENKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWKSAK GEP+W+SPWG GRPGWHIECSAMSA +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKPGEPYWQSPWGNGRPGWHIECSAMSAKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++ WIH G V +D EKMSKSLGNFFT++ V+ Y+ A+R FL+ +HYRS
Sbjct: 242 STCAHGHKYVNTWIHTGMVQVDKEKMSKSLGNFFTVKDVLAQYNAEAVRYFLLSSHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS LE A + +Y AL++ P V + + F A+M
Sbjct: 302 LNYSAENLEQAHAALGRLY---------------TALRNITPAADVDLQSDYIARFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L L + + +N T K A L + + VLGL+ G
Sbjct: 347 DDDFNTPEALPVLFELAREVNRFKETEPAKA--------AELAGVLSLLAGVLGLLQ-GD 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+E LQ D+ E + L I R AR NK++ +DA R L A GI + D
Sbjct: 398 AEQFLQ---SGTSDDDVAEIEAL--IAQRNTARANKDWAAADAARDALTAKGIIVEDKNG 452
Query: 555 GTTWR 559
T+WR
Sbjct: 453 VTSWR 457
>gi|261378624|ref|ZP_05983197.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
gi|269144957|gb|EEZ71375.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
Length = 473
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/501 (43%), Positives = 292/501 (58%), Gaps = 48/501 (9%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY +
Sbjct: 2 LNIYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQM 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF
Sbjct: 122 IAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYH 358
S A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y
Sbjct: 242 SVGASGHSCGHNHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYD 301
Query: 359 PLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPD 418
P +R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 302 PEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA-------------KFD 348
Query: 419 TVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEK 478
++N + F A+M+DD T +A L + +N + A L
Sbjct: 349 LFENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAHLAG 394
Query: 479 TIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAI 538
++ + ++GL+ E L + L+ +++ I R AR +K + +SD I
Sbjct: 395 CLKALGGIIGLLQRDPIEFL----QGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRI 450
Query: 539 RKDLAAVGIALMDSPVGTTWR 559
R L I L D+ GTTWR
Sbjct: 451 RDLLNEHKIILEDNAGGTTWR 471
>gi|410615541|ref|ZP_11326560.1| cysteinyl-tRNA synthetase [Glaciecola psychrophila 170]
gi|410164954|dbj|GAC40449.1| cysteinyl-tRNA synthetase [Glaciecola psychrophila 170]
Length = 459
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/489 (44%), Positives = 301/489 (61%), Gaps = 38/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVG+YVCG+T YD+ H+GHAR Y++FD++ RY+R G EV
Sbjct: 2 LHIYNTLTRQKEQFKPLQAGKVGLYVCGITVYDVCHVGHARTYLSFDLMVRYMRSRGLEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII+RANE G P + + H+D + L P VEPRV+ H+P I
Sbjct: 62 KYVRNITDVDDKIISRANEQGLTPDQFTEKTIARMHEDFAAIGLLEPDVEPRVTTHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++I +++D G+AY+ D GDV F V + +YG+L + L+ +G RVAV + K++P DF
Sbjct: 122 INVIQRLIDKGYAYQADSGDVLFEVSTYADYGRLGRQDLDQLNSGSRVAVAAEKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWKS K GEPFWESPWG GRPGWHIECSAM+ +LG FDIHGGG DL FPHHENE+AQ
Sbjct: 182 VLWKSVKPGEPFWESPWGNGRPGWHIECSAMNHKHLGEHFDIHGGGSDLTFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G V ++ EKMSKSLGNFFT+R V+E+Y +R FL+ YRS
Sbjct: 242 SCCAFDTPYVNYWMHTGMVQVNQEKMSKSLGNFFTLRDVLEVYDAETVRYFLMSAQYRSQ 301
Query: 375 INYS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPP-DTVTSINKFHNDF 430
++YS + Q ++ ER++ AL+D P D S+ + F
Sbjct: 302 LSYSDSFIQQARASLERLY------------------TALRDVTPNMDVDVSMGDYQTRF 343
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
+M DD +T A L D K IN + ++QA A L + + +LG++
Sbjct: 344 NQAMDDDFNTPEAFAILFDLAKEIN-----KSDEQQA------ADLAGVMIKLADILGIL 392
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
++ LQ ++ D+ E + L I+ R AR NK++ +DA R L A+ + L
Sbjct: 393 QQAPND-FLQGSAGGVQD-DVFEIEAL--IKARNDARTNKDWAAADAARDALNALNVVLE 448
Query: 551 DSPVGTTWR 559
DS GTTWR
Sbjct: 449 DSANGTTWR 457
>gi|284919700|emb|CAX65477.1| hypothetical protein [Enterobacter hormaechei]
Length = 480
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/496 (43%), Positives = 294/496 (59%), Gaps = 35/496 (7%)
Query: 68 KPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRY 127
K + + L NT+ ++EL+ P E K+GMYVCGVT YDL H+GHAR +V FD++ RY
Sbjct: 14 KNNEVNVMIKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRY 73
Query: 128 LRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPR 187
LR GY+V +VRN TD+DDKII RA + GED SL+ R E H D L LPP++EPR
Sbjct: 74 LRFRGYDVTFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPR 133
Query: 188 VSDHMPHIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDS 246
++H+P II MI ++L FAY + GDV FS YG+LSG+ + RAG R+ V+
Sbjct: 134 PTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNE 193
Query: 247 RKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFP 306
K++P DF LWK AK GEP W SPWG GRPGWHIECSAM+ YLG FDIHGGG DL+FP
Sbjct: 194 YKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFP 253
Query: 307 HHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFL 366
HHENEIAQS +A + +++YW+H G VT++ EKMSKSL NFFT+R ++ + ++R FL
Sbjct: 254 HHENEIAQSTSANDGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFL 313
Query: 367 IGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKF 426
+ HYR P+NYS + A + +Y + + S + +
Sbjct: 314 LSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRS----------------EQHDAW 357
Query: 427 HNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTV 486
F +M DD +T LA L + + IN L T + AAL T++++ V
Sbjct: 358 RARFCEAMDDDFNTPQALAILFELTREINRLCGTND--------DEAAALATTLKDLGNV 409
Query: 487 LGLMSTGYSEVLLQLREKALKRADL--TEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLA 543
LGL+ L R+DL E Q++++ I R+ AR+ +++K+D +R +LA
Sbjct: 410 LGLLEQSADAFLKN-------RSDLHPAELQLIEKLIHQRSEARRMGKWDKADRLRNELA 462
Query: 544 AVGIALMDSPVGTTWR 559
GI L D T+WR
Sbjct: 463 EQGIDLEDVGENTSWR 478
>gi|212637933|ref|YP_002314453.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
gi|226735044|sp|B7GJ46.1|SYC_ANOFW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212559413|gb|ACJ32468.1| Cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
Length = 465
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/486 (42%), Positives = 293/486 (60%), Gaps = 31/486 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++RK+E P KV MYVCG T Y+ HIG+AR + FD + RYL+ GYEV Y
Sbjct: 5 VYNTLTRKKEPFIPLEPNKVKMYVCGPTVYNYIHIGNARPAIVFDTIRRYLQFRGYEVQY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDK+I A ELGED +++ R+ E + +D+ L C V PRV++++ II
Sbjct: 65 VSNFTDVDDKLIRAARELGEDVPTIAERFIEAYFEDITALGCKKADVHPRVTENIDTIIQ 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I Q+++ G+AY VDGDVY+ +F +YG+LS + +++ ++G R+ V +K++P DFALW
Sbjct: 125 FIEQLIEKGYAYEVDGDVYYRTRRFSDYGKLSHQSVDELKSGARIEVGEKKEDPLDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AKEGE +W+SPWG GRPGWHIECSAM+ YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KAAKEGEIYWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
YW+HNG++ ID+EKMSKSLGNF + +++ P LR F++ HYR PINY
Sbjct: 245 LTGKPFAKYWLHNGYINIDNEKMSKSLGNFILVHDIIKQVDPQVLRFFMLSVHYRHPINY 304
Query: 378 SVVQLESAS---ERIFYIYQTL-HDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
S LESA ER+ Y L H E + +L + + I + N+F+
Sbjct: 305 SQPLLESARSGLERLKTAYANLKHRLESSTNLT-------TNDEQWLAKIEELRNEFIRE 357
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T +A L + K N L +Q ++ A + + VLGL
Sbjct: 358 MDDDFNTANGIAVLFELAKQANVYLMENHTSQQVIQ-----AFLQQFEQLFDVLGL---- 408
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+L++ +L ++++ I+ R ARKN+++ +D IR +L A I L D+P
Sbjct: 409 -----------SLQQDELLDEEIEALIQQRIEARKNRDFALADRIRDELKAKNIILEDTP 457
Query: 554 VGTTWR 559
GT WR
Sbjct: 458 QGTRWR 463
>gi|375000267|ref|ZP_09724607.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353074955|gb|EHB40715.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
Length = 461
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/485 (46%), Positives = 296/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID+ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IDLTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ A + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGEDMA----AANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V LQ +A ++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PDVFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|254875866|ref|ZP_05248576.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254841887|gb|EET20301.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 459
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/485 (44%), Positives = 286/485 (58%), Gaps = 29/485 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
YN++S K+E KP K+ MYVCG+T YD HIGHAR + FDV+ RY ++ G++V +
Sbjct: 3 FYNSLSGKKEEFKPIEPNKIKMYVCGITVYDDCHIGHARTNIAFDVINRYFKYRGFDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE L R + H L+ L P+ EPR + +P +I
Sbjct: 63 VRNITDIDDKIIKRANENGETTDQLVERTIKSMHDAFDKLNILRPTKEPRATQTIPEMIA 122
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI +++ GFAY+ +GDV++ V KF +YG+LS + LE G RV V K+NP DF L
Sbjct: 123 MIETLVEKGFAYQGTNGDVFYRVAKFADYGKLSKQNLEALEQGSRVDVVEEKENPMDFVL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AKEGEP W+SPWG GRPGWHIECSAMS LG +FDIH GG DL FPHHENEIAQS
Sbjct: 183 WKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +YW+H+G V +++EKMSKSL NFFTI +V+E YHP +R FL T YRS IN
Sbjct: 243 ACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTINEVIEEYHPEVIRYFLASTVYRSEIN 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L++A + ++ L D E ++ ++P D N++ F+ +M +
Sbjct: 303 YSKENLDNARASVERLFNALRDIE---------PVEVNLPDDA----NEYEEKFIKAMDN 349
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L K IN L K K +R + VLG++ T E
Sbjct: 350 DFNTPEALAVLFSLAKEINTLKTVNKYKASGYAF--------LLRKLCDVLGILFTDIEE 401
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K D++E + L I +R A+K+K Y ++D IR +L GI L DS GT
Sbjct: 402 YF-----KQGDGIDVSEIEKL--IAERAQAKKDKNYARADEIRNELQNQGIILEDSATGT 454
Query: 557 TWRPA 561
TW+
Sbjct: 455 TWKKG 459
>gi|146307594|ref|YP_001188059.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina ymp]
gi|187629851|sp|A4XVG1.1|SYC_PSEMY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145575795|gb|ABP85327.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina ymp]
Length = 461
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/487 (44%), Positives = 289/487 (59%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +++ +P V +V MYVCG+T YD HIGHARV V FDV+ R+LR GY+V
Sbjct: 3 LSIYNTLTKTKDVFQPLVGNQVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRQRGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L R H+D L L P +EPR + H+ +
Sbjct: 63 TYVRNITDIDDKIIKRANENGEPFEALVERMIAAMHEDEARLSVLRPDIEPRATGHIAGM 122
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V +F YG+LS RK+++ + G R+ VD K++P DF
Sbjct: 123 HQMIQTLIDKGYAYAPGNGDVYYRVTRFETYGKLSRRKIDELKIGARIEVDEIKEDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W+SPWG GRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 183 VLWKGAKPGEPSWDSPWGKGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 243 SEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L L ++ P + +F +M
Sbjct: 303 INYSEESLKEAKGALERFYNGLK------------GLPEAAPAGGEAYVERFG----VAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L + ++ +N L + LAA K + +VL VL L +
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLRES-----DVQAAAGLAAQLKQLASVLGVLQLEPEAF 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D E + L I R AR +K + +SD IR L A+G+ L D
Sbjct: 402 ------LQAGAAGKVDAAEVEAL--IAARLQARADKNWAESDRIRDQLTAMGVVLEDGKG 453
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 454 GTTWRLA 460
>gi|395495078|ref|ZP_10426657.1| cysteinyl-tRNA ligase [Pseudomonas sp. PAMC 25886]
Length = 462
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 285/489 (58%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD HIGH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPAVAPAGGEAFVARFTEVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL + +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELAS-------VLGVLQMEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L+ A R D E L I+ R AR NK++ +SD IR L A+G+ L D
Sbjct: 399 DF------LQAGAEGRVDAAEVDAL--IQARLTARANKDWAESDRIRDQLTAMGVVLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|395794944|ref|ZP_10474258.1| cysteinyl-tRNA ligase [Pseudomonas sp. Ag1]
gi|395340887|gb|EJF72714.1| cysteinyl-tRNA ligase [Pseudomonas sp. Ag1]
Length = 462
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 285/489 (58%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD HIGH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPSVAPAGGEAFVARFTEVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL + +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELAS-------VLGVLQMEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L+ A R D E L I+ R AR NK++ +SD IR L A+G+ L D
Sbjct: 399 DF------LQAGAEGRVDAAEVDAL--IQARLTARANKDWAESDRIRDQLTAMGVVLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|387771057|ref|ZP_10127229.1| cysteine--tRNA ligase [Pasteurella bettyae CCUG 2042]
gi|386902976|gb|EIJ67797.1| cysteine--tRNA ligase [Pasteurella bettyae CCUG 2042]
Length = 459
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/488 (44%), Positives = 292/488 (59%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP +VGMYVCGVT YDL H GH R +V+FDV+ RYLR LGY +
Sbjct: 2 LKIFNTLTREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRFLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
++RN TDVDDKII RA E E L R E H+D L+ L P VEPR + HMP I
Sbjct: 62 RFIRNITDVDDKIIKRALENNETCDQLVERMIAEMHKDFDALNILRPDVEPRATKHMPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M+ ++ G AY DGDV F V+ + YG+LS + LE +AG RV + S KKNP DF
Sbjct: 122 IAMVEALIKRGHAYVAADGDVMFDVESYQNYGRLSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP WESPWG GRPGWHIECSAM++ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWESPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G +TI+ EKMSKSL NFFTIR ++ Y ++R F + YRS
Sbjct: 242 SCCAHDGEYVNYWLHTGMLTINEEKMSKSLNNFFTIRDILTKYDSESVRYFFLTAQYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YS + A + + +Y L C+ + + P++ +++ F +M
Sbjct: 302 LDYSEENIGLARKALERLYTALRGCDFNVKM-----------PES----DQYVEAFKEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA L D + IN L + +A RL S ++ + VLGL+
Sbjct: 347 DDDFNTPGALAVLFDLAREINKL--KTENINEANRLSS------RLKQLAGVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVL---QRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
E LQ D +D+V Q I+ R AR K++ ++DA R +L A+GI L D
Sbjct: 398 PESFLQ--------GDTADDEVAKIEQLIKQRNEARAAKDWAQADAARNELTAMGIVLED 449
Query: 552 SPVGTTWR 559
GTTWR
Sbjct: 450 GANGTTWR 457
>gi|421564183|ref|ZP_16009991.1| cysteine--tRNA ligase [Neisseria meningitidis NM2795]
gi|402338983|gb|EJU74206.1| cysteine--tRNA ligase [Neisseria meningitidis NM2795]
Length = 473
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/499 (43%), Positives = 290/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 304 VVRFFILRAHYRSPLNYSDTHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAQLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ + L + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPTAFL----QGGAASDGLSNEEIEDLIAQRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|406676594|ref|ZP_11083780.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC35]
gi|404626817|gb|EKB23627.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC35]
Length = 458
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/490 (45%), Positives = 295/490 (60%), Gaps = 37/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YD HIGH R +V FDV+ RYLR+ GY++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E L+ R + H D L + P +EPR + H+ I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +LD AY D GDV F V+ + +YG+LSG+ LE +AG RV V K+NP DF
Sbjct: 122 IELVQSLLDKEHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L D L + AA + + F +M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRD----LPVAAAAGGDEQVAR------------FKEAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D ++ IN +KG+ A+ AAL +R + VLG
Sbjct: 346 DDDFNTPEAYSALFDLVREIN----RQKGEDMAV----AAALGARLRELGAVLG------ 391
Query: 495 SEVLLQLREKALKRADLTEDQV--LQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+LQ +A + D +++V ++R I +R AR +K + +DA R L +GI L D
Sbjct: 392 ---ILQQDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMGIVLED 448
Query: 552 SPVGTTWRPA 561
S T+WR A
Sbjct: 449 STGKTSWRRA 458
>gi|365969337|ref|YP_004950898.1| cysteinyl-tRNA synthetase [Enterobacter cloacae EcWSU1]
gi|365748250|gb|AEW72477.1| Cysteinyl-tRNA synthetase [Enterobacter cloacae EcWSU1]
Length = 465
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/489 (45%), Positives = 296/489 (60%), Gaps = 30/489 (6%)
Query: 73 STQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLG 132
S+ L ++NTM+R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LG
Sbjct: 3 SSMLKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLG 62
Query: 133 YEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHM 192
Y + YVRN TD+DDKII RANE GE ++L R E H+D L+ P EPR + H+
Sbjct: 63 YNLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNIQRPDSEPRATHHI 122
Query: 193 PHIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNP 251
IID+ ++++ G AY D GDV FSV P YGQLS + L+ +AG RV V K+NP
Sbjct: 123 HEIIDITEKLIERGHAYVADNGDVMFSVPTDPTYGQLSRQDLDQLQAGARVDVVDVKRNP 182
Query: 252 ADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
DF LWK +KEGEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENE
Sbjct: 183 MDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPHHENE 242
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HY
Sbjct: 243 IAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHY 302
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RS +NYS L+ A + +Y L +K++ A F F+
Sbjct: 303 RSQLNYSEENLKQARAALERLYTALRGTDKSVPAAGGEA---------------FEARFI 347
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
M+DD +T + L D + +N L ++ + + AL +R + +VLGL+
Sbjct: 348 DVMNDDFNTPEAYSVLFDMAREVNRL--------KSEDMAAANALASHLRKLSSVLGLLE 399
Query: 492 TGYSEVLLQLREKALKRADLTE-DQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
E L L+ A +AD +E ++ Q I R AR+ K++ +DA R L +GI L
Sbjct: 400 ---QEPDLFLQSGA--QADDSEVAEIEQLINARLEARQAKDWAAADAARNRLTEMGIILE 454
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 455 DGPQGTTWR 463
>gi|15677904|ref|NP_275072.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|385854125|ref|YP_005900639.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|416198682|ref|ZP_11619049.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|433466065|ref|ZP_20423533.1| cysteine--tRNA ligase [Neisseria meningitidis NM422]
gi|433491440|ref|ZP_20448549.1| cysteine--tRNA ligase [Neisseria meningitidis NM418]
gi|433505933|ref|ZP_20462861.1| cysteine--tRNA ligase [Neisseria meningitidis 9506]
gi|433508075|ref|ZP_20464969.1| cysteine--tRNA ligase [Neisseria meningitidis 9757]
gi|433510233|ref|ZP_20467087.1| cysteine--tRNA ligase [Neisseria meningitidis 12888]
gi|433512288|ref|ZP_20469096.1| cysteine--tRNA ligase [Neisseria meningitidis 4119]
gi|30316184|sp|Q9JXE6.1|SYC_NEIMB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|7227346|gb|AAF42401.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|325139404|gb|EGC61944.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|325201129|gb|ADY96584.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|432200267|gb|ELK56364.1| cysteine--tRNA ligase [Neisseria meningitidis NM422]
gi|432225192|gb|ELK80945.1| cysteine--tRNA ligase [Neisseria meningitidis NM418]
gi|432238457|gb|ELK94023.1| cysteine--tRNA ligase [Neisseria meningitidis 9506]
gi|432238657|gb|ELK94222.1| cysteine--tRNA ligase [Neisseria meningitidis 9757]
gi|432244477|gb|ELK99965.1| cysteine--tRNA ligase [Neisseria meningitidis 12888]
gi|432244649|gb|ELL00134.1| cysteine--tRNA ligase [Neisseria meningitidis 4119]
Length = 473
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 294/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE-- 351
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ + + F +M+DD T +A L + +N + A RL++L
Sbjct: 352 -AGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVN----KTNDAQLAGRLKALGG----- 401
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 402 -----IIGLLQRDPTEFL----QGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|254492720|ref|ZP_05105891.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268595732|ref|ZP_06129899.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268597919|ref|ZP_06132086.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268600306|ref|ZP_06134473.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268602538|ref|ZP_06136705.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268681087|ref|ZP_06147949.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268685567|ref|ZP_06152429.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291044895|ref|ZP_06570604.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
gi|293397970|ref|ZP_06642176.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
gi|226511760|gb|EEH61105.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268549121|gb|EEZ44539.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268551707|gb|EEZ46726.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268584437|gb|EEZ49113.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268586669|gb|EEZ51345.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268621371|gb|EEZ53771.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268625851|gb|EEZ58251.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291011789|gb|EFE03785.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
gi|291611916|gb|EFF40985.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
Length = 476
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 290/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 7 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 66
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 67 VRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 126
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 127 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 186
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 187 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 246
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 247 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 306
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 307 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 353
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 354 ENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAHLAGCL 399
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ E L + L+ +++ I R AR +K + +SD IR
Sbjct: 400 KALGGIIGLLQRNPIEFL----QGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRD 455
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L DS GTTWR
Sbjct: 456 LLNEHKIILEDSAGGTTWR 474
>gi|268600169|ref|ZP_06134336.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268685235|ref|ZP_06152097.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
gi|268584300|gb|EEZ48976.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268625519|gb|EEZ57919.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
Length = 476
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 290/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 7 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 66
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 67 VRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 126
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 127 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 186
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 187 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 246
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 247 GASGHTCGHDHAQTHHGRSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 306
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 307 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 353
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 354 ENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAHLAGCL 399
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ E L + L+ +++ I R AR +K + +SD IR
Sbjct: 400 KALGGIIGLLQRNPIEFL----QGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRD 455
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L DS GTTWR
Sbjct: 456 LLNEHKIILEDSAGGTTWR 474
>gi|90407713|ref|ZP_01215892.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
gi|90311182|gb|EAS39288.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
Length = 460
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/485 (45%), Positives = 296/485 (61%), Gaps = 29/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+++E P V GKV MYVCGVT YD HIGH R +V FD + RYLR GY++
Sbjct: 2 LKIYNTLSKQKEEFTPLVAGKVSMYVCGVTIYDNCHIGHGRTFVAFDSVVRYLRFKGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
++RN TDVDDKII RANE E +L+ R+ + H+D L+ L P +EPRV++HMP +
Sbjct: 62 NFIRNITDVDDKIIKRANENNESCDALTARFTKAMHRDFDALNILRPDLEPRVTEHMPDV 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +++ AY +GDV FSV F YG+LSG+ L+ +AG RV V+ K +P DF
Sbjct: 122 IAMIKTLIEKQHAYVASNGDVLFSVSSFDGYGKLSGQNLDMLQAGARVDVEESKHDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP WESPWG GRPGWHIECSAMS +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWESPWGAGRPGWHIECSAMSFKHLGPIFDIHGGGSDLTFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + ++ + W+H+G V +D KMSKSL NFFTI+ V+E Y ++R FLI HYRS
Sbjct: 242 SCCAHDATYANTWMHSGMVQVDKVKMSKSLNNFFTIKDVLEAYDAESVRYFLISGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L D + + DA KD N + F +M
Sbjct: 302 LNYSEDNLKQARASLERLYTALRDVD----ISDAPIAKD----------NSHYQAFCKAM 347
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T LA L + K +N K K A + S L +R + VLGL+
Sbjct: 348 DDDFNTPEALAVLFELAKALN------KAKLSADK--SAPELALLLRTLGNVLGLLDQS- 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
++ LQ E + A++ + ++L I+ R AR NK++ +D R L+A+ I L D
Sbjct: 399 ADDFLQGDESS---AEVEKIELL--IKQRNDARANKDWASADDARAQLSALNIVLEDGAN 453
Query: 555 GTTWR 559
GTTWR
Sbjct: 454 GTTWR 458
>gi|261400776|ref|ZP_05986901.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
gi|269209376|gb|EEZ75831.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
Length = 473
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/498 (43%), Positives = 294/498 (59%), Gaps = 48/498 (9%)
Query: 79 YNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYV 138
YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + YV
Sbjct: 5 YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTYV 64
Query: 139 RNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDM 198
RN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I M
Sbjct: 65 RNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAM 124
Query: 199 ITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF LW
Sbjct: 125 IETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK GEP WESPWG GRPGWHIECSAMS G++FDIHGGG DL FPHHENEIAQS
Sbjct: 185 KAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVG 244
Query: 318 ACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLA 361
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 245 ATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEV 304
Query: 362 LRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVT 421
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 305 VRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE--- 351
Query: 422 SINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIR 481
+ + + F +M+DD T +A L + +N + A RL++L
Sbjct: 352 AGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKT----NNAQLAGRLKALGG------ 401
Query: 482 NVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKD 541
++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 402 ----IIGLLQRDPTEFL----QGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDL 453
Query: 542 LAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 454 LNEHKIILEDTAGGTTWR 471
>gi|260549524|ref|ZP_05823742.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|424056184|ref|ZP_17793705.1| cysteinyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|425739726|ref|ZP_18857922.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-487]
gi|260407317|gb|EEX00792.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|407441224|gb|EKF47730.1| cysteinyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|425496120|gb|EKU62262.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-487]
Length = 473
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/488 (44%), Positives = 302/488 (61%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKRAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L I +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQGF-------IERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R + +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRYLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + ++AL L++ ++ I+ R A+K K++ K+DAIR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADAIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|423202014|ref|ZP_17188593.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER39]
gi|404615625|gb|EKB12587.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER39]
Length = 458
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/490 (45%), Positives = 296/490 (60%), Gaps = 37/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YD HIGH R +V FDV+ RYLR+ GY++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E L+ R + H D L + P +EPR + H+ I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +LD AY D GDV F V+ + +YG+LSG+ LE +AG RV V K+NP DF
Sbjct: 122 IELVQSLLDKEHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V+ + +R FL+ HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHFDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L D L + AA ++ + F +M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRD----LPVAAAAGGEEQVAR------------FKEAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D ++ IN +KG+ A+ AAL +R + VLG
Sbjct: 346 DDDFNTPEAYSALFDLVREIN----RQKGEDMAV----AAALGARLRELGAVLG------ 391
Query: 495 SEVLLQLREKALKRADLTEDQV--LQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+LQ +A + D +++V ++R I +R AR +K + +DA R L +GI L D
Sbjct: 392 ---ILQQDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMGIVLED 448
Query: 552 SPVGTTWRPA 561
S T+WR A
Sbjct: 449 SAGKTSWRRA 458
>gi|194099737|ref|YP_002002872.1| protein CysS [Neisseria gonorrhoeae NCCP11945]
gi|385336681|ref|YP_005890628.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|193935027|gb|ACF30851.1| CysS [Neisseria gonorrhoeae NCCP11945]
gi|317165224|gb|ADV08765.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 475
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 290/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 6 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 66 VRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 126 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 185
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 186 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 245
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 246 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 305
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 306 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 352
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 353 ENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAHLAGCL 398
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ E L + L+ +++ I R AR +K + +SD IR
Sbjct: 399 KALGGIIGLLQRNPIEFL----QGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRD 454
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L DS GTTWR
Sbjct: 455 LLNEHKIILEDSAGGTTWR 473
>gi|421541345|ref|ZP_15987471.1| cysteine--tRNA ligase [Neisseria meningitidis 93004]
gi|402314868|gb|EJU50436.1| cysteine--tRNA ligase [Neisseria meningitidis 93004]
Length = 473
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/499 (43%), Positives = 294/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G++FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE-- 351
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ + + F +M+DD T +A L + +N + A L +
Sbjct: 352 -ADDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKT--------------NDAQLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPTEFL----QGGAASDGLSNEEIEDLIAQRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|386020696|ref|YP_005938720.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
gi|327480668|gb|AEA83978.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
Length = 462
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/487 (46%), Positives = 286/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E +P KV MYVCG+T YD HIGHARV V FDV+ R+LRH GY+V
Sbjct: 4 LAIYNTLSKAKEPFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYDV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA+E GE +L R H+D L+ L P VEPR +DH+ +
Sbjct: 64 TYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDETRLNVLRPDVEPRATDHIAGM 123
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D GFAY +GDVY+ V KF YG+LS RK+ED + G R+ VD K++P DF
Sbjct: 124 HTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKEDPLDF 183
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W+SPWGPGRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 184 VLWKGAKPGEPSWDSPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 243
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 244 SEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSP 303
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P ++F F A M
Sbjct: 304 INYSEDSLREAKSALERFYNGLK----------------GLPEAQPAGGDEFVARFAAVM 347
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L + ++ +N L + +LAA K + VL VL L +
Sbjct: 348 DDDFNSPEACAVLFEMIREVNRLRES-----DLTAAAALAARLKELAGVLGVLQLEPGAF 402
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D E + L A KN + +SD IR L A+G+ L D
Sbjct: 403 ------LQAGAAGKVDAAEVEALIAARLAARAEKN--WGESDRIRDQLTAMGVVLEDGKG 454
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 455 GTTWRLA 461
>gi|238027920|ref|YP_002912151.1| cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
gi|237877114|gb|ACR29447.1| Cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
Length = 464
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/489 (44%), Positives = 289/489 (59%), Gaps = 35/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R +++ P+ G+V MYVCG+T YD H+GHAR+ V FDV+ R+LR LGY V
Sbjct: 4 LRIYNTLARDKQVFVPRHPGEVRMYVCGITVYDYCHVGHARMMVVFDVVQRWLRALGYRV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+ R+ H+D+ L P EPR +D +P +
Sbjct: 64 TYVRNITDIDDKIIRRAVENGETIGSLTSRFIAAMHEDLDALGVARPEHEPRATDFVPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI + NG+AY+ DGDV ++V KF YG+LSG+ L+D RAGERVA + K++P DF
Sbjct: 124 LGMIETLEANGYAYQASDGDVNYAVRKFANYGRLSGKSLDDLRAGERVAANDAKQDPLDF 183
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWKSAK GEP W+S +G GRPGWHIECSAM LGH FDIHGGG DL FPHHENE
Sbjct: 184 VLWKSAKPGEPADTSWDSKYGRGRPGWHIECSAMGCTLLGHHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGFV +DSEKMSKSLGNFFTIR+V+ Y +R F++ THY
Sbjct: 244 IAQSEGATGETFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLARYDAEVMRFFIVRTHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RSP+NYS V L+ A + +Y L D DAA L P F
Sbjct: 304 RSPLNYSEVHLDDARASLTRLYTALKDVTP-----DAAPLDRDEP---------HARRFA 349
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A+M+DD +T + ++ L + +N ++ L L + R L +
Sbjct: 350 AAMNDDFNTALAVSVLFELAGEVNRTREPALARQLKQLGGLLGLLGREPRAYLQQASGAA 409
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+G E A E Q+ R+ A++ K Y ++D IR L G+AL D
Sbjct: 410 SGALE------------AGAIEAQIAARV----AAKQAKNYAEADRIRAALLEAGVALED 453
Query: 552 SPVG-TTWR 559
P G T WR
Sbjct: 454 KPGGLTEWR 462
>gi|113460388|ref|YP_718450.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
gi|123131947|sp|Q0I1Q1.1|SYC_HAES1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|112822431|gb|ABI24520.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
Length = 459
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 293/485 (60%), Gaps = 30/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR+LGYE+
Sbjct: 2 LKIFNTLTREKEVFKPISENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII R+ E E L R E ++D L+ L P EPR + H+ I
Sbjct: 62 TYVRNITDVDDKIIRRSLENRETCEQLVDRMVVEMYKDFDALNVLRPDFEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ +++ G AY D GDV F V+ F EYG+LS + L +AG RV + KKNP DF
Sbjct: 122 IALVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLTQLQAGARVEISEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ +LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWNSPWGAGRPGWHIECSAMNCKHLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 242 SCCAHGNRYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ A A F F +M
Sbjct: 302 LNYSEENLDLAHGALERLYTALRGTDKS-----AVAFGGE----------NFIAQFTEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T ++ L + + IN L + K + + LAA +R + +LGL+
Sbjct: 347 NDDFNTPNAISVLFEMAREINRLKNEDK-----LLADGLAA---RLRELAGILGLLEQDP 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L + A++ + + L I+ R AR+ K++ ++DA R +L +G+ L D
Sbjct: 399 EDFL----QAGSDDAEIAKIEAL--IKQRNDARQAKDWARADAARNELTTMGVILEDGSN 452
Query: 555 GTTWR 559
GT WR
Sbjct: 453 GTMWR 457
>gi|59802301|ref|YP_209013.1| hypothetical protein NGO1993 [Neisseria gonorrhoeae FA 1090]
gi|240013127|ref|ZP_04720040.1| CysS [Neisseria gonorrhoeae DGI18]
gi|240015570|ref|ZP_04722110.1| CysS [Neisseria gonorrhoeae FA6140]
gi|240120198|ref|ZP_04733160.1| CysS [Neisseria gonorrhoeae PID24-1]
gi|81311142|sp|Q5F5D6.1|SYC_NEIG1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|59719196|gb|AAW90601.1| putative cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
Length = 473
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 290/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAHLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ E L + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRNPIEFL----QGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L DS GTTWR
Sbjct: 453 LLNEHKIILEDSAGGTTWR 471
>gi|402779984|ref|YP_006635530.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|402540896|gb|AFQ65045.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
Length = 471
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/496 (43%), Positives = 294/496 (59%), Gaps = 35/496 (7%)
Query: 68 KPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRY 127
K + + L NT+ ++EL+ P E K+GMYVCGVT YDL H+GHAR +V FD++ RY
Sbjct: 5 KNNEVNVMIKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRY 64
Query: 128 LRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPR 187
LR GY+V +VRN TD+DDKII RA + GED SL+ R E H D L LPP++EPR
Sbjct: 65 LRFRGYDVTFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPR 124
Query: 188 VSDHMPHIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDS 246
++H+P II MI ++L FAY + GDV FS YG+LSG+ + RAG R+ V+
Sbjct: 125 PTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNE 184
Query: 247 RKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFP 306
K++P DF LWK AK GEP W SPWG GRPGWHIECSAM+ YLG FDIHGGG DL+FP
Sbjct: 185 YKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFP 244
Query: 307 HHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFL 366
HHENEIAQS +A + +++YW+H G VT++ EKMSKSL NFFT+R ++ + ++R FL
Sbjct: 245 HHENEIAQSTSANDGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFL 304
Query: 367 IGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKF 426
+ HYR P+NYS + A + +Y + + S + +
Sbjct: 305 LSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRS----------------EQHDAW 348
Query: 427 HNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTV 486
F +M DD +T LA L + + IN L T + AAL T++++ V
Sbjct: 349 RARFCEAMDDDFNTPQALAILFELTREINRLCGTND--------DEAAALATTLKDLGNV 400
Query: 487 LGLMSTGYSEVLLQLREKALKRADL--TEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLA 543
LGL+ L R+DL E Q++++ I R+ AR+ +++K+D +R +LA
Sbjct: 401 LGLLEQSADAFLKN-------RSDLHPAELQLIEKLIHQRSEARRMGKWDKADRLRNELA 453
Query: 544 AVGIALMDSPVGTTWR 559
GI L D T+WR
Sbjct: 454 EQGIDLEDVGENTSWR 469
>gi|378949916|ref|YP_005207404.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens F113]
gi|359759930|gb|AEV62009.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens F113]
Length = 460
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/487 (44%), Positives = 287/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD HIGH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD++DKII RA E GE +L+ R + H+D L+ P +EPR +DH+P +
Sbjct: 62 TYVRNITDIEDKIINRARENGEPYDALTERMIKAMHEDEARLNIRKPDLEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 LSMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W SPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWASPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V++ YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPSVPAAGGEAFVVRFTEVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L + ++ IN L + L + A L ++ + +VLG++
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRES--------DLNAAAGLAARLKELASVLGVLQLEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L+ A R D E + L I+ R AR NK++ +SD IR L A+G+ L D
Sbjct: 398 DDF---LQAGAEGRVDAAEVEAL--IQARLTARANKDWAESDRIRDQLTAMGVVLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|385341075|ref|YP_005894946.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|416175060|ref|ZP_11609368.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
gi|416189388|ref|ZP_11615301.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|433489259|ref|ZP_20446405.1| cysteine--tRNA ligase [Neisseria meningitidis M13255]
gi|325129292|gb|EGC52130.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
gi|325135312|gb|EGC57933.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|325201281|gb|ADY96735.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|432220189|gb|ELK76014.1| cysteine--tRNA ligase [Neisseria meningitidis M13255]
Length = 473
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/499 (43%), Positives = 290/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAQLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ E L + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPIEFL----QGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|421863184|ref|ZP_16294884.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379306|emb|CBX22079.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 483
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/498 (43%), Positives = 294/498 (59%), Gaps = 48/498 (9%)
Query: 79 YNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYV 138
YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + YV
Sbjct: 15 YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTYV 74
Query: 139 RNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDM 198
RN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I M
Sbjct: 75 RNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAM 134
Query: 199 ITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF LW
Sbjct: 135 IETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLW 194
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK GEP WESPWG GRPGWHIECSAMS G++FDIHGGG DL FPHHENEIAQS
Sbjct: 195 KAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVG 254
Query: 318 ACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLA 361
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 255 ATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEV 314
Query: 362 LRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVT 421
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 315 VRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE--- 361
Query: 422 SINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIR 481
+ + + F +M+DD T +A L + +N + A RL++L
Sbjct: 362 AGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKT----NNAQLAGRLKALGG------ 411
Query: 482 NVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKD 541
++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 412 ----IIGLLQRDPTEFL----QGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDL 463
Query: 542 LAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 464 LNEHKIILEDTAGGTTWR 481
>gi|340363807|ref|ZP_08686122.1| cysteine--tRNA ligase [Neisseria macacae ATCC 33926]
gi|339884918|gb|EGQ74673.1| cysteine--tRNA ligase [Neisseria macacae ATCC 33926]
Length = 473
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/502 (43%), Positives = 291/502 (57%), Gaps = 54/502 (10%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREYGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A L A
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFELSENA---------- 353
Query: 421 TSINKFHNDFLASMSDDLHT---TVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALE 477
N + F A+M+DD T VL L+ + ND+ L
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDV-----------------HLA 393
Query: 478 KTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDA 537
++ + ++GL+ +E L + L+ +++ I R AR +K + +SD
Sbjct: 394 GCLKALGGIIGLLQRDPTEFL----QGGAVSDGLSNEEIEDLIAQRKQARADKNWAESDR 449
Query: 538 IRKDLAAVGIALMDSPVGTTWR 559
IR L I L D+ GTTWR
Sbjct: 450 IRDLLNEHKIILEDNAGGTTWR 471
>gi|261345727|ref|ZP_05973371.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
gi|282566216|gb|EFB71751.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
Length = 462
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/488 (44%), Positives = 291/488 (59%), Gaps = 33/488 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP GK+GMYVCG+T YDL HIGH R +V FD + RYLR+LGY++
Sbjct: 2 LQIFNTLTRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E L+ R E H+D L+ L P EPR + H+ I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIHEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTESLIERGHAYVADNGDVMFEVKTDPNYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP WESPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A +++YW+H+G V +D EKMSKSL NFFTIR V++ Y +R FL+ HYRS
Sbjct: 242 STCAHEGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLQYYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + +Y +L +K+++ A K F +M
Sbjct: 302 LNYTEENLKQARTALERLYTSLRGTDKSVAPAGGEAFKAR---------------FCEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAA---LEKTIRNVLTVLGLMS 491
+DD +T + L D + IN L + E +AA + +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDIAREINRL-----------KTEDMAAANGMAAQLRELAKVLGLLE 395
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
E LQ + A++ + + L I+ R AR++K++ +D R L A+G+ L D
Sbjct: 396 Q-EPEAFLQGGAQGEDDAEVAKIEAL--IKQRNDARQSKDWALADQARDALTAMGVVLED 452
Query: 552 SPVGTTWR 559
S GTTWR
Sbjct: 453 SSAGTTWR 460
>gi|37527666|ref|NP_931010.1| cysteinyl-tRNA synthetase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|61216271|sp|Q7N0S5.1|SYC_PHOLL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|36787101|emb|CAE16176.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) (CysRS)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 461
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/489 (44%), Positives = 292/489 (59%), Gaps = 36/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCG+T YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIFNTLSRQKEEFKPIHPGKVGMYVCGITIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E ++D L+ L P +EPR + H+ I
Sbjct: 62 TYVRNVTDVDDKIIKRAAENSESCDDLTGRMLAEMYKDFDALNILRPDLEPRATRHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I + ++ G AY D GDV FSV+ +YG LS + L +AG RV V K+NP DF
Sbjct: 122 IALTESLIKRGHAYVADNGDVMFSVESDQDYGLLSRQDLSQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM++ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGNHFDIHGGGADLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + Y L + S+PP F F+ +M
Sbjct: 302 LNYTEDNLKQARTALERFYTALRGTDA------------SVPP---AGGEIFEARFIDAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D ++ IN L ++ +++ L +R + +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMVREINRL--------KSEDMDAANGLAAELRKLAGILGL----- 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGIALM 550
L Q E+ L R +D+ + +IE R ARKNK++ +D+ R L +GI L
Sbjct: 394 ---LQQQPEQFLHRGIQADDEEIAKIEALIKQRNDARKNKDWPLADSARNQLNEMGIELE 450
Query: 551 DSPVGTTWR 559
D P GT+WR
Sbjct: 451 DGPQGTSWR 459
>gi|121635739|ref|YP_975984.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
gi|120867445|emb|CAM11217.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
Length = 699
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/499 (43%), Positives = 293/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 470 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE-- 577
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ + + F +M+DD T +A L + +N + A L +
Sbjct: 578 -ADDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKT--------------NDAQLAGCL 622
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 623 KALGGIIGLLQRDPTEFL----QGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRD 678
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 679 LLNEHKIILEDNAGGTTWR 697
>gi|319638892|ref|ZP_07993650.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
gi|317399796|gb|EFV80459.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
Length = 473
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/499 (43%), Positives = 291/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFSPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGDLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENANDYTSRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDANLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ E L + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPIEFL----QGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|433497645|ref|ZP_20454670.1| cysteine--tRNA ligase [Neisseria meningitidis M7089]
gi|433499690|ref|ZP_20456691.1| cysteine--tRNA ligase [Neisseria meningitidis M7124]
gi|433501759|ref|ZP_20458738.1| cysteine--tRNA ligase [Neisseria meningitidis NM174]
gi|432231584|gb|ELK87243.1| cysteine--tRNA ligase [Neisseria meningitidis M7089]
gi|432232373|gb|ELK88018.1| cysteine--tRNA ligase [Neisseria meningitidis M7124]
gi|432232760|gb|ELK88396.1| cysteine--tRNA ligase [Neisseria meningitidis NM174]
Length = 473
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/499 (43%), Positives = 294/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G++FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE-- 351
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ + + F +M+DD T +A L + +N + A L +
Sbjct: 352 -AGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKT--------------NNAQLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPTEFL----QGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|300715706|ref|YP_003740509.1| cysteinyl-tRNA synthetase [Erwinia billingiae Eb661]
gi|299061542|emb|CAX58656.1| Cysteinyl-tRNA synthetase [Erwinia billingiae Eb661]
Length = 462
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/492 (44%), Positives = 292/492 (59%), Gaps = 41/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE L+ R E H+D L+ LPP EPR + H+ I
Sbjct: 62 NYVRNITDIDDKIIKRANENGETVEVLTNRMIGEMHKDFAALNILPPDQEPRATRHISEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSR-KKNPAD 253
I+++++++D AY +GDV FSV P+YGQLS + LE +AG RV V+ K+NP D
Sbjct: 122 IEIVSKLIDREHAYVASNGDVMFSVPSDPQYGQLSRQDLEQLQAGARVEVEQDVKRNPMD 181
Query: 254 FALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIA 313
F LWK +K EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIA
Sbjct: 182 FVLWKMSKANEPSWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIA 241
Query: 314 QSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
QS A +++YW+H+G V ID EKMSKSL NFFT+R V++ + +R FL+ HYRS
Sbjct: 242 QSTCAHEGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQHFDAETVRCFLMSGHYRS 301
Query: 374 PINY---SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDF 430
+NY ++ Q SA ER++ A++++ F F
Sbjct: 302 QLNYGEDNLKQARSALERLY------------------TAIRNTDSSAEPAGGEVFETRF 343
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
+M DD +T +AL D + +N L +A + + L +R + VLGL+
Sbjct: 344 REAMDDDFNTPEAYSALFDMAREVNRL--------KAEDMSAANGLAAKLRQLAGVLGLL 395
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGI 547
E+ LQ A +D+V + I R AR+ K + ++D R L A+GI
Sbjct: 396 EQD-PELFLQ------NGAQSNDDEVAEIEALIRQRLDARREKNWAQADMARDKLVAMGI 448
Query: 548 ALMDSPVGTTWR 559
L D P GT+WR
Sbjct: 449 VLEDGPQGTSWR 460
>gi|403675335|ref|ZP_10937514.1| cysteinyl-tRNA ligase [Acinetobacter sp. NCTC 10304]
Length = 473
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/488 (43%), Positives = 302/488 (61%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR V E +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVTEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S + +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + + AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|349611156|ref|ZP_08890463.1| cysteinyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
gi|348614537|gb|EGY64083.1| cysteinyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
Length = 473
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/504 (43%), Positives = 292/504 (57%), Gaps = 54/504 (10%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY +
Sbjct: 2 LTIYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQM 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF
Sbjct: 122 IAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYH 358
S A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y
Sbjct: 242 SVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYD 301
Query: 359 PLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPD 418
P +R F++ HYRSP+NYS L+ A + +Y TL + A L A
Sbjct: 302 PEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFELSENA-------- 353
Query: 419 TVTSINKFHNDFLASMSDDLHT---TVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAA 475
N + F A+M+DD T VL L+ + ND+
Sbjct: 354 -----NDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDV-----------------H 391
Query: 476 LEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKS 535
L ++ + ++GL+ +E L + L+ +++ I R AR +K + +S
Sbjct: 392 LAGCLKALGGIIGLLQRDPTEFL----QGGAVSDGLSNEEIEDLIARRKQARADKNWAES 447
Query: 536 DAIRKDLAAVGIALMDSPVGTTWR 559
D IR L I L D+ GTTWR
Sbjct: 448 DRIRDLLNEHKIILEDNAGGTTWR 471
>gi|258404670|ref|YP_003197412.1| cysteinyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
gi|257796897|gb|ACV67834.1| cysteinyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
Length = 485
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/482 (41%), Positives = 285/482 (59%), Gaps = 3/482 (0%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+M+R++E P+ G++ +YVCG+T YD HIGHAR V FDVL RY R + V +
Sbjct: 3 LYNSMTRQKEEFIPQTSGEISLYVCGITAYDYCHIGHARAAVVFDVLVRYFRDQNFAVHF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTDVDDKII RA E + ++++Y +++DM L P + EP+ ++H+ +I
Sbjct: 63 VRNFTDVDDKIIKRAAEEHLEADEVAQKYIAAYYEDMERLGVQPANFEPKATEHIQDMIG 122
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ ++ G AY GDVYF V P YG LSGR+L+ RAG R+A K++P DFAL
Sbjct: 123 LAENLIAKGHAYATASGDVYFRVRSLPSYGSLSGRELDTMRAGARIAPGEEKEDPLDFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK EP W SPWG GRPGWH+ECSAMS +LG DIHGGG DL FPHHENE AQS
Sbjct: 183 WKRAKPEEPSWPSPWGNGRPGWHLECSAMSERFLGLPLDIHGGGQDLAFPHHENERAQSL 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA +W+HNGFV +++EKMSKSLGNF TIR ++ Y P LR FL+ HYRSP++
Sbjct: 243 AASGKELARFWVHNGFVQVEAEKMSKSLGNFITIRDILSYYLPEVLRYFLVTKHYRSPLD 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
++ ++ A + + +YQT +ALS + + K +P + I+ + +M D
Sbjct: 303 FNWEVMDEAEKGLRRLYQTRQHIAEALSRSNWS--KTELPSELSAEIDDLDAKWRQNMED 360
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
DL+T L + + N +L + +K + L ++ ++ VLGL
Sbjct: 361 DLNTAGALGHVFTLNRLANRILEDKTWRKAEAGGKLLERIQSIFEHIGNVLGLFQQTPDA 420
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L LR + KR + V Q I R AR+ K++ +D++R+ L +GI + D+P G
Sbjct: 421 FLDDLRTQKAKRKGIDTSAVAQLITKRQEARRAKDFTTADSVRQQLEEMGIEVQDTPQGP 480
Query: 557 TW 558
W
Sbjct: 481 VW 482
>gi|312961737|ref|ZP_07776235.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens WH6]
gi|311283996|gb|EFQ62579.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens WH6]
Length = 462
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/489 (45%), Positives = 286/489 (58%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD HIGH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRANENGEAFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPAVAPAGGEAFVARFTEVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL + +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELAS-------VLGVLQMEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L+ A R D + + L I+ R AR NK++ +SD IR L A+G+ L D
Sbjct: 399 DF------LQAGAEGRVDAAQVEAL--IQARLAARTNKDWAESDRIRDQLTAMGVVLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|225077094|ref|ZP_03720293.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
NRL30031/H210]
gi|224951651|gb|EEG32860.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
NRL30031/H210]
Length = 473
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/503 (43%), Positives = 293/503 (58%), Gaps = 56/503 (11%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKESFSPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + P T
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT-----------------PATA 346
Query: 421 TSINKFHND----FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAAL 476
+++ ND F A+M+DD T +A L + +N + A L
Sbjct: 347 FELSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAHL 392
Query: 477 EKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSD 536
++ + ++GL+ +E L + L+ +++ I R AR +K + +SD
Sbjct: 393 AGCLKALGGIIGLLQRDPTEFL----QGGAVSDGLSNEEIDDLIARRKQARADKNWAESD 448
Query: 537 AIRKDLAAVGIALMDSPVGTTWR 559
IR L I L D+ GTTWR
Sbjct: 449 RIRDLLNEHKIILEDNAGGTTWR 471
>gi|418849052|ref|ZP_13403787.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392822399|gb|EJA78211.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
Length = 461
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/485 (46%), Positives = 297/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
ALWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 ALWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGED----MTAANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V LQ +A ++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PDVFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|298369710|ref|ZP_06981027.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
gi|298282267|gb|EFI23755.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
Length = 473
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/499 (42%), Positives = 292/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFTPINPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + ++ +
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTP-------------AVAFELS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAHLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPTEFL----QGGAVSDGLSNEEIEDLIARRKQARSDKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|408481226|ref|ZP_11187445.1| cysteinyl-tRNA ligase [Pseudomonas sp. R81]
Length = 462
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 286/489 (58%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD HIGH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+ K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKATKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPAVAPAGGEAFVARFTEVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL + +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELAS-------VLGVLQMEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L+ A R D QV I+ R AR NK++ +SD IR L A+G+ L D
Sbjct: 399 DF------LQAGAEGRVDAA--QVDALIQARLAARTNKDWAESDRIRDQLTAMGVVLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|416573459|ref|ZP_11767805.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|363571726|gb|EHL55630.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
Length = 461
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/485 (46%), Positives = 298/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID+ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IDLTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ A + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGEDMA----AANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V LQ +A R ++ E + L I+ R ARK K++ +DA R LA +GI L D P
Sbjct: 398 PDVFLQSGAQADDR-EVAEIEAL--IQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|237745445|ref|ZP_04575925.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
gi|229376796|gb|EEO26887.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
Length = 462
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/495 (44%), Positives = 304/495 (61%), Gaps = 45/495 (9%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R +++ P GKV MYVCG+T YD HIGHAR+ ++FDV+YR+L+ LGYEV
Sbjct: 4 LQIYNSLTRSKQVFTPIEPGKVRMYVCGMTIYDYCHIGHARMMMSFDVVYRWLKALGYEV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+ R+ + H+D L LPP EPR ++++P +
Sbjct: 64 TYVRNITDIDDKIINRAGENGESISSLTARFTQYMHEDTSALGILPPDHEPRATEYVPEM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+++I ++ NG AY+ DGDV +SV F YG+LSG+ L+D RAGERV V++ K++P DF
Sbjct: 124 LELIAKLEKNGLAYQSEDGDVNYSVRDFRGYGKLSGKSLDDLRAGERVDVNTGKRDPLDF 183
Query: 255 ALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWKSAK EP W S WG GRPGWHIECSAMS+ LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKSAKPSEPDEAKWSSRWGAGRPGWHIECSAMSSKLLGDHFDIHGGGADLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGFV +D+EKMSKSLGNFFTIR V++ Y LR F+I +HY
Sbjct: 244 IAQSEGASGHPFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLKNYDAEVLRFFIIRSHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDC---EKALSLLDAAALKDSIPPDTVTSINKFHN 428
RSP+NYS L+ A + +Y L D +K + + A++
Sbjct: 304 RSPLNYSDAHLDDARSALTRLYTALKDIDVQDKPVDWQEEHAVR---------------- 347
Query: 429 DFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLG 488
F +M+DD +T +A L + +N R S+ + ++ + +VLG
Sbjct: 348 -FSRAMNDDFNTPEAVAVLFELANEVN-------------RTHSVEVASQ-LKALGSVLG 392
Query: 489 LMSTGYSEVLLQLREKALKRADLTEDQVLQ-RIEDRTVARKNKEYEKSDAIRKDLAAVGI 547
L+ + L + D E++ ++ +I+ R A+K +++ K+D IR +L GI
Sbjct: 393 LLERDPRQFL-----QGNGTVDENEEKWIEAQIQARREAKKTRDFAKADKIRNELLEKGI 447
Query: 548 ALMDSPVGTT-WRPA 561
L D P G T WR A
Sbjct: 448 VLEDKPGGKTEWRRA 462
>gi|423207191|ref|ZP_17193747.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC34]
gi|404620258|gb|EKB17155.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC34]
Length = 458
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/490 (45%), Positives = 296/490 (60%), Gaps = 37/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YD HIGH R +V FDV+ RYLR+ GY++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E L+ R + H D L + P +EPR + H+ I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +L+ AY D GDV F V+ + +YG+LSG+ LE +AG RV V K+NP DF
Sbjct: 122 IELVQSLLEKEHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L D A AAA D + +F +M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPAA-----AAAGGDE-------QVARFKE----AM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D ++ IN +KG+ A+ AAL +R + VLG
Sbjct: 346 DDDFNTPEAYSALFDLVREIN----RQKGEDMAV----AAALGARLRELGAVLG------ 391
Query: 495 SEVLLQLREKALKRADLTEDQV--LQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+LQ +A + D +++V ++R I +R AR +K + +DA R L +GI L D
Sbjct: 392 ---ILQQDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMGIVLED 448
Query: 552 SPVGTTWRPA 561
S T+WR A
Sbjct: 449 SAGKTSWRRA 458
>gi|304388715|ref|ZP_07370773.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
gi|304337279|gb|EFM03455.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
Length = 699
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/499 (43%), Positives = 293/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYLLTY 289
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 470 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE-- 577
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ + + F +M+DD T +A L + +N + A L +
Sbjct: 578 -ADDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKT--------------NDAQLAGCL 622
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 623 KALGGIIGLLQRDPTEFL----QGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRD 678
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 679 LLNEHKIILEDNAGGTTWR 697
>gi|157145196|ref|YP_001452515.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
gi|425075962|ref|ZP_18479065.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425086595|ref|ZP_18489688.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|444350682|ref|YP_007386826.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
gi|157082401|gb|ABV12079.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
gi|204636645|gb|ACI01739.1| putative cysteinyl-tRNA synthetase class Ia [Escherichia coli]
gi|405593466|gb|EKB66907.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405603319|gb|EKB76440.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|443901512|emb|CCG29286.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
Length = 460
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/486 (43%), Positives = 291/486 (59%), Gaps = 35/486 (7%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
L NT+ ++EL+ P E K+GMYVCGVT YDL H+GHAR +V FD++ RYLR GY+V +
Sbjct: 4 LTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYDVTF 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RA + GED SL+ R E H D L LPP++EPR ++H+P II
Sbjct: 64 VRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTEHIPQIIS 123
Query: 198 MITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++L FAY + GDV FS YG+LSG+ + RAG R+ V+ K++P DF L
Sbjct: 124 MIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK GEP W SPWG GRPGWHIECSAM+ YLG FDIHGGG DL+FPHHENEIAQS
Sbjct: 184 WKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHENEIAQST 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
+A + +++YW+H G VT++ EKMSKSL NFFT+R ++ + ++R FL+ HYR P+N
Sbjct: 244 SANDGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLLSAHYRKPLN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS + A + +Y + + S + + F +M D
Sbjct: 304 YSEENIHLARASLTRLYTACQFADGSRS----------------EQHDAWRARFCEAMDD 347
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L + + IN L T + AAL T++++ VLGL+
Sbjct: 348 DFNTPQALAILFELTREINRLCGTND--------DEAAALATTLKDLGNVLGLLEQSADA 399
Query: 497 VLLQLREKALKRADL--TEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L R+DL E Q++++ I R+ AR+ +++K+D +R +LA GI L D
Sbjct: 400 FLKN-------RSDLHPAELQLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLEDVG 452
Query: 554 VGTTWR 559
T+WR
Sbjct: 453 ENTSWR 458
>gi|433447291|ref|ZP_20410888.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
gi|431999955|gb|ELK20862.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
Length = 465
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/486 (43%), Positives = 295/486 (60%), Gaps = 31/486 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++RK+E P KV MYVCG T Y+ HIG+AR + FD + RYL+ GYEV Y
Sbjct: 5 VYNTLTRKKEPFIPLEPNKVKMYVCGPTVYNYIHIGNARPAIVFDTIRRYLQFRGYEVQY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDK+I A ELGED +++ R+ E + +D+ L C V PRV++++ II
Sbjct: 65 VSNFTDVDDKLIRAARELGEDVPTIAERFIEAYFEDITALGCKKADVHPRVTENIDTIIQ 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I Q+++ G+AY VDGDVY+ +F +YG+LS + +++ ++G R+ V +K++P DFALW
Sbjct: 125 FIEQLIEKGYAYEVDGDVYYRTRRFSDYGKLSHQSIDELKSGARIEVGEKKEDPLDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AKEGE +W+SPWG GRPGWHIECSAM+ YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KAAKEGEIYWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
YW+HNG++ ID+EKMSKSLGNF + +++ P LR F++ HYR PINY
Sbjct: 245 LTGKPFAKYWLHNGYINIDNEKMSKSLGNFILVHDIIKQVDPQVLRFFMLSVHYRHPINY 304
Query: 378 SVVQLESAS---ERIFYIYQTL-HDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
S LESA ER+ Y L H E + +L + + I + N+F+
Sbjct: 305 SQPLLESARSGLERLKTAYANLKHRLESSTNLT-------TNDEQWLAKIEELRNEFIRE 357
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T +A L + K N L K QA+ + L E+ + VLGL
Sbjct: 358 MDDDFNTANGIAVLFELAKQANVYL-MEKHTSQAVIQKFLRQFEQ----LFDVLGL---- 408
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+L++ +L ++++ I+ R ARKN+++ +D IR +L A I L D+P
Sbjct: 409 -----------SLQQDELLDEEIEALIQQRIEARKNRDFALADRIRDELKAKNIILEDTP 457
Query: 554 VGTTWR 559
GT WR
Sbjct: 458 QGTRWR 463
>gi|53719852|ref|YP_108838.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei K96243]
gi|53723757|ref|YP_103282.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
gi|67642953|ref|ZP_00441703.1| cysteine--tRNA ligase [Burkholderia mallei GB8 horse 4]
gi|76809388|ref|YP_334067.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
gi|121599658|ref|YP_993471.1| cysteinyl-tRNA synthetase [Burkholderia mallei SAVP1]
gi|124385862|ref|YP_001029097.1| cysteinyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
gi|126441734|ref|YP_001059571.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 668]
gi|126449503|ref|YP_001080979.1| cysteinyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
gi|126452065|ref|YP_001066849.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
gi|134277835|ref|ZP_01764550.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 305]
gi|167001797|ref|ZP_02267589.1| cysteine--tRNA ligase [Burkholderia mallei PRL-20]
gi|167720284|ref|ZP_02403520.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei DM98]
gi|167739281|ref|ZP_02412055.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 14]
gi|167816497|ref|ZP_02448177.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 91]
gi|167830172|ref|ZP_02461643.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 9]
gi|167846407|ref|ZP_02471915.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei B7210]
gi|167894988|ref|ZP_02482390.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 7894]
gi|167903372|ref|ZP_02490577.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
gi|167916840|ref|ZP_02503931.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 112]
gi|167919625|ref|ZP_02506716.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
gi|217420917|ref|ZP_03452422.1| cysteine--tRNA ligase [Burkholderia pseudomallei 576]
gi|226198973|ref|ZP_03794536.1| cysteine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
gi|237812906|ref|YP_002897357.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei MSHR346]
gi|242315930|ref|ZP_04814946.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1106b]
gi|254178125|ref|ZP_04884780.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
gi|254184417|ref|ZP_04891007.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1655]
gi|254191450|ref|ZP_04897954.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
gi|254197349|ref|ZP_04903771.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei S13]
gi|254200234|ref|ZP_04906600.1| cysteinyl-tRNA synthetase [Burkholderia mallei FMH]
gi|254209314|ref|ZP_04915660.1| cysteinyl-tRNA synthetase [Burkholderia mallei JHU]
gi|254258938|ref|ZP_04949992.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1710a]
gi|254297083|ref|ZP_04964536.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 406e]
gi|254358017|ref|ZP_04974290.1| cysteinyl-tRNA synthetase [Burkholderia mallei 2002721280]
gi|386861244|ref|YP_006274193.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1026b]
gi|403519278|ref|YP_006653412.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei BPC006]
gi|418382652|ref|ZP_12966590.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 354a]
gi|418538402|ref|ZP_13104011.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1026a]
gi|418540456|ref|ZP_13105995.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1258a]
gi|418546705|ref|ZP_13111902.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1258b]
gi|418552948|ref|ZP_13117791.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 354e]
gi|61216158|sp|Q62J37.1|SYC_BURMA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216161|sp|Q63SS8.1|SYC_BURPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|109894887|sp|Q3JQT6.1|SYC_BURP1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166200132|sp|A3ML43.1|SYC_BURM7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166200133|sp|A2SAX8.1|SYC_BURM9 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166200134|sp|A1V5G8.1|SYC_BURMS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166200135|sp|A3NWX8.1|SYC_BURP0 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166200136|sp|A3NB50.1|SYC_BURP6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|52210266|emb|CAH36245.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei K96243]
gi|52427180|gb|AAU47773.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
gi|76578841|gb|ABA48316.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
gi|121228468|gb|ABM50986.1| cysteinyl-tRNA synthetase [Burkholderia mallei SAVP1]
gi|124293882|gb|ABN03151.1| cysteine--tRNA ligase [Burkholderia mallei NCTC 10229]
gi|126221227|gb|ABN84733.1| cysteine--tRNA ligase [Burkholderia pseudomallei 668]
gi|126225707|gb|ABN89247.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
gi|126242373|gb|ABO05466.1| cysteine--tRNA ligase [Burkholderia mallei NCTC 10247]
gi|134251485|gb|EBA51564.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 305]
gi|147749830|gb|EDK56904.1| cysteinyl-tRNA synthetase [Burkholderia mallei FMH]
gi|147750087|gb|EDK57158.1| cysteinyl-tRNA synthetase [Burkholderia mallei JHU]
gi|148027144|gb|EDK85165.1| cysteinyl-tRNA synthetase [Burkholderia mallei 2002721280]
gi|157807476|gb|EDO84646.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 406e]
gi|157939122|gb|EDO94792.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
gi|160699164|gb|EDP89134.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
gi|169654090|gb|EDS86783.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei S13]
gi|184214948|gb|EDU11991.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1655]
gi|217396329|gb|EEC36346.1| cysteine--tRNA ligase [Burkholderia pseudomallei 576]
gi|225929073|gb|EEH25097.1| cysteine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
gi|237504389|gb|ACQ96707.1| cysteine--tRNA ligase [Burkholderia pseudomallei MSHR346]
gi|238524180|gb|EEP87614.1| cysteine--tRNA ligase [Burkholderia mallei GB8 horse 4]
gi|242139169|gb|EES25571.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1106b]
gi|243062482|gb|EES44668.1| cysteine--tRNA ligase [Burkholderia mallei PRL-20]
gi|254217627|gb|EET07011.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1710a]
gi|385347688|gb|EIF54338.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1026a]
gi|385361808|gb|EIF67680.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1258a]
gi|385363464|gb|EIF69238.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1258b]
gi|385372357|gb|EIF77475.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 354e]
gi|385377132|gb|EIF81748.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 354a]
gi|385658372|gb|AFI65795.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1026b]
gi|403074921|gb|AFR16501.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei BPC006]
Length = 465
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/490 (46%), Positives = 299/490 (61%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R ++ P+ G+V MYVCG+T YD HIGHAR+ V FD++ R+LR GY V
Sbjct: 4 LRIYNTLARDKQDFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDIVQRWLRARGYRV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+RR+ + + D L P +EPR ++ +P +
Sbjct: 64 TYVRNITDIDDKIIRRAVENGETIQSLTRRFTDAMNADFDALGVERPDLEPRATEFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++ NG+AY+ DGDV +SV KF YG+LSG+ LED RAGERVA + K++P DF
Sbjct: 124 LGMIEKLEANGYAYQAKDGDVNYSVRKFANYGRLSGKSLEDLRAGERVAANDAKEDPLDF 183
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AK EP WES +G GRPGWHIECSAM LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKRAKPQEPAGASWESKYGAGRPGWHIECSAMGCTLLGAHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGFV +DSEKMSKSLGNFFTIR+V+E + +R F++ THY
Sbjct: 244 IAQSEGATGQTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLEKFDAEVVRFFIVRTHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDF 430
RSP+NYS V L+ A + +Y ALKD+ P ++ H F
Sbjct: 304 RSPLNYSDVHLDDARASLTRLY---------------TALKDATPDAQPLDWSEAHAQRF 348
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
A+M+DD +T V +A L + +N TR+ AL + +R + +LGL+
Sbjct: 349 AAAMNDDFNTAVAVAVLFELATEVN---RTRE-----------PALARQLRLLAGLLGLL 394
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
E LQ A + L ++ RI R A++ K Y ++D IR +L GIAL
Sbjct: 395 GREPRE-FLQHAAGAARTGALEPHEIEARIAARVAAKQAKNYAEADRIRAELLEAGIALE 453
Query: 551 DSPVGTT-WR 559
D P G+T WR
Sbjct: 454 DKPGGSTEWR 463
>gi|359437267|ref|ZP_09227337.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20311]
gi|359446712|ref|ZP_09236363.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20439]
gi|392554148|ref|ZP_10301285.1| cysteinyl-tRNA ligase [Pseudoalteromonas undina NCIMB 2128]
gi|358028091|dbj|GAA63586.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20311]
gi|358039518|dbj|GAA72612.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20439]
Length = 459
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/488 (44%), Positives = 285/488 (58%), Gaps = 36/488 (7%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E KP V+GK+ MYVCG+T YD HIGHAR +V FDV+ RYLRHLGY++ Y
Sbjct: 4 IYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHLGYDLKY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TDVDDKII RANE GE L+ R + H+D L+ L P VEP V+ HM II
Sbjct: 64 VRNITDVDDKIIKRANENGEAINDLTVRMTKAMHEDFDSLNMLRPDVEPTVTGHMDEIIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
M+ +++ G AY DGDV F V F +YG LS + L ++G RV V K +P DF L
Sbjct: 124 MVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK GEP W SPWG GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHENEIAQSC
Sbjct: 184 WKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQSC 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A N +++ WIH G V ++ EKMSKSL NFFT+R+V++ Y ++R FLI HYRS +N
Sbjct: 244 CANNGQYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKQYDAESVRYFLISGHYRSQLN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L+ A + IY L E P + N++ F +M+D
Sbjct: 304 YSQENLDQARSSLERIYTALRGVE---------------PVECELEGNEYVAKFRKAMND 348
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D ++ L + + K +N + + E L +R++ +LG+
Sbjct: 349 DFNSPEALPVVFEVAKELNRVKESDS--------EKAGHLAFVLRSLGEILGIA------ 394
Query: 497 VLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
Q +A + +D+V + I R AR +K + +D R L A+G+ L DS
Sbjct: 395 ---QQAPEAFLQGGQNDDEVAEIEALIVKRNDARASKNWAAADEARDALNALGVILEDSA 451
Query: 554 VGTTWRPA 561
TTWR A
Sbjct: 452 GKTTWRKA 459
>gi|299770841|ref|YP_003732867.1| cysteinyl-tRNA synthetase [Acinetobacter oleivorans DR1]
gi|298700929|gb|ADI91494.1| cysteinyl-tRNA synthetase [Acinetobacter oleivorans DR1]
Length = 473
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/488 (44%), Positives = 300/488 (61%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G+ V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L C P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCAAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGSAYPAANGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S I +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQMYGQTTTETLDQSF-------IERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R + +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRYLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + ++AL L++ ++ I+ R A+K K++ K+D IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQEALT---LSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|83591300|ref|YP_431309.1| cysteinyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
gi|109894909|sp|Q2RFM3.1|SYC_MOOTA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|83574214|gb|ABC20766.1| cysteinyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
Length = 476
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/492 (42%), Positives = 295/492 (59%), Gaps = 26/492 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
++LYNT++ ++E P G+V MYVCG T Y+ H+G+AR V FD L RYL + Y+V
Sbjct: 1 MYLYNTLTGRKEEFTPVEPGRVRMYVCGPTTYNYIHLGNARPMVVFDTLRRYLEYRNYDV 60
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YV+NFTD+DDK+I RA E + P+ ++ RY EEF +D L+ ++ PRVS H+ I
Sbjct: 61 LYVQNFTDIDDKVINRAREEHQAPLVIAERYIEEFFKDADALNVKRATLYPRVSQHIDAI 120
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I I +++ GFAY DGDVYF V+KFP YG+LS R + RAG RV V++ K+NP DFA
Sbjct: 121 IAAIATLVERGFAYVADGDVYFEVEKFPAYGRLSKRTPGEMRAGARVEVNTSKRNPLDFA 180
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+A GEP WESPWGPGRPGWHIECS M+ YLG FDIHGGG DL+FPHHENEIAQ+
Sbjct: 181 LWKAACPGEPSWESPWGPGRPGWHIECSTMALKYLGPGFDIHGGGADLIFPHHENEIAQA 240
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A + +W+HNGF+T++ EKMSKS GNFF +R +++ + PLA+RL+L+ THYRSPI
Sbjct: 241 EAQTGCTFARFWLHNGFITVNQEKMSKSKGNFFLVRDILKRFRPLAVRLYLLATHYRSPI 300
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDT---VTSINKFHNDFLA 432
++ L +A + + T +A L + ++P T + +F++
Sbjct: 301 DFDDAGLLAAERGLERLENTRRLLGEARCQLTGTGAETTVPARTSALAGRAEELRQEFIS 360
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T LAAL D + IN L+ A + E+ VL + G
Sbjct: 361 AMDDDFNTARALAALYDLAREINSYLNGTTTIDPAALRTAAITFEQLGGEVLGLFG---- 416
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIED-----RTVARKNKEYEKSDAIRKDLAAVGI 547
Q R++ +D++L + D R AR+ +++ +D IR L +GI
Sbjct: 417 -------QARQQ-------VDDELLSGLMDLILQVRQEARQRRDWATADTIRDRLKELGI 462
Query: 548 ALMDSPVGTTWR 559
L D+P G W+
Sbjct: 463 VLEDTPRGPRWK 474
>gi|85058683|ref|YP_454385.1| cysteinyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
gi|109894945|sp|Q2NV45.1|SYC_SODGM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|84779203|dbj|BAE73980.1| cysteinyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
Length = 457
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/490 (45%), Positives = 291/490 (59%), Gaps = 42/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP GKVGMYVCG+T YDL HIGH R +V FDV+ RYLR+ GYEV
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVTRYLRYRGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD++DKII RA E GE L+ R E H D L+ L P EPR + ++ I
Sbjct: 62 NYVRNITDIEDKIIRRAAENGETFHQLTERMISEMHSDFDQLNILRPDQEPRATHYIDAI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ Q++D AY +GDV F+VD +YG LS + LE +AG RV V K+NP DF
Sbjct: 122 IELVGQLIDRDHAYVAANGDVMFAVDSDSDYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LGH FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNGRQLGHHFDIHGGGSDLIFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++ W+H G V +D EKMSKSLGNFFT+R V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNVWMHAGMVMVDREKMSKSLGNFFTVRDVLRYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
+NYS + Q SA ER++ AL DA A +P + F F+
Sbjct: 302 LNYSEENLKQARSALERLYI----------ALRGTDATA----VPAGG----DHFVAQFI 343
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A+M DD +T + L D + +N L K + + +AA T+R + VLG
Sbjct: 344 AAMDDDFNTPKAYSVLFDIAREVNRL------KSEQPAAQGMAA---TLRQLAGVLG--- 391
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQR--IEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LL+ A + ED V+ I+ R ARK +++ +D R L A+GI L
Sbjct: 392 ------LLEQEPAAFLQQGAAEDNVMIEALIQQRNDARKARQWALADEARDKLTALGIVL 445
Query: 550 MDSPVGTTWR 559
D P GTTWR
Sbjct: 446 EDGPQGTTWR 455
>gi|260913075|ref|ZP_05919557.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
gi|260632662|gb|EEX50831.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
Length = 467
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/486 (44%), Positives = 296/486 (60%), Gaps = 32/486 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E+ KP KVGMYVCG+T YDL H+GH R +V FDV+ RYLR+LGY++
Sbjct: 2 LKIYNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA + E L R E ++D L+ L P VEPR + H+ I
Sbjct: 62 TYVRNITDVDDKIIKRALKNRESCDQLVDRMVAEMYKDFDMLNVLRPDVEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ +++ G AY +GDV F+V+ F EYG+LS + LE +AG RV + KKNP DF
Sbjct: 122 ITLVEKLIQRGHAYVSSNGDVMFNVESFKEYGKLSRQNLEQLQAGARVEIVHIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W+SPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPEEPSWDSPWGPGRPGWHIECSAMNYKVLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H+G + +D EKMSKSLGNFFT+R V+ +Y ++R FL+ HYRSP
Sbjct: 242 SCCAHGNQYVNYWMHSGMIMVDREKMSKSLGNFFTLRDVLNIYDAESVRYFLLNAHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +K+ +I IN F +M
Sbjct: 302 LNYSEENLNLAHTALERLYTALRGTDKS-----------AIACGGENYINAFKE----AM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T ++ L + + +N L K + M E +L +R + +LGL+
Sbjct: 347 NDDFNTPNAVSVLFEIAREVNKL------KNEDM--EKANSLAARLRELADILGLLYQDP 398
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L L ++ +K L E + QR E AR K++ +DA R+ L+ + + L D
Sbjct: 399 EEFLQSGLDDEEVK---LIESLIKQRNE----ARAAKDWATADAAREQLSKMKVVLEDGA 451
Query: 554 VGTTWR 559
GTTWR
Sbjct: 452 NGTTWR 457
>gi|419765672|ref|ZP_14291901.1| hypothetical protein UUU_25010 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397741410|gb|EJK88639.1| hypothetical protein UUU_25010 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 471
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/496 (43%), Positives = 293/496 (59%), Gaps = 35/496 (7%)
Query: 68 KPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRY 127
K + + L NT+ ++EL+ P E K+GMYVCGVT YDL H+GHAR +V FD++ RY
Sbjct: 5 KNNEVNVMIKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRY 64
Query: 128 LRHLGYEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPR 187
LR GY+V +VRN TD+DDKII RA + GED SL+ R E H D L LPP++EPR
Sbjct: 65 LRFRGYDVTFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPR 124
Query: 188 VSDHMPHIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDS 246
++H+P II MI ++L FAY + GDV FS YG+LSG+ + RAG R+ V+
Sbjct: 125 PTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNE 184
Query: 247 RKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFP 306
K++P DF LWK AK GEP W SPWG GRPGWHIECSAM+ YLG FDIHGGG DL+FP
Sbjct: 185 YKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCRYLGTHFDIHGGGSDLIFP 244
Query: 307 HHENEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFL 366
HHENEIAQS +A +++YW+H G VT++ EKMSKSL NFFT+R ++ + ++R FL
Sbjct: 245 HHENEIAQSTSANVGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFL 304
Query: 367 IGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKF 426
+ HYR P+NYS + A + +Y + + S + +
Sbjct: 305 LSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRS----------------EQHDAW 348
Query: 427 HNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTV 486
F +M DD +T LA L + + IN L T + AAL T++++ V
Sbjct: 349 RARFCEAMDDDFNTPQALAILFELTREINRLCGTND--------DEAAALATTLKDLGNV 400
Query: 487 LGLMSTGYSEVLLQLREKALKRADL--TEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLA 543
LGL+ L R+DL E Q++++ I R+ AR+ +++K+D +R +LA
Sbjct: 401 LGLLEQSADAFLKN-------RSDLHPAELQLIEKLIHQRSEARRMGKWDKADRLRNELA 453
Query: 544 AVGIALMDSPVGTTWR 559
GI L D T+WR
Sbjct: 454 EQGIDLEDVGENTSWR 469
>gi|421797751|ref|ZP_16233787.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-21]
gi|410395945|gb|EKP48230.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-21]
Length = 473
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/488 (43%), Positives = 303/488 (62%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G++V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L CL P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ER+ V+ KK+P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERIDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK+ EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKKNEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEKYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S + +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSF-------VERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAILFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHNV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+ L + + AL L++ ++ I+ R A+K K++ K+D+IR+ L G+ L D+
Sbjct: 408 DDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|407793853|ref|ZP_11140884.1| cysteinyl-tRNA ligase [Idiomarina xiamenensis 10-D-4]
gi|407214007|gb|EKE83858.1| cysteinyl-tRNA ligase [Idiomarina xiamenensis 10-D-4]
Length = 465
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 294/485 (60%), Gaps = 24/485 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NT++R++E KP EG+V +YVCGVT YD HIGHAR YV+FDV+ RYLR +GY+V
Sbjct: 2 LTLFNTLTRQKEAFKPIHEGQVNLYVCGVTIYDFCHIGHARTYVSFDVVVRYLRAIGYQV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RANE G+ ++R + H+D L+ L P VEP V+DHM I
Sbjct: 62 KYVRNITDVDDKIIRRANESGQQIGDITRHFAAAMHEDFAALNLLEPDVEPTVTDHMDDI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +++ G AY D GDV F V F +YG+LS + L +AG RV VD+ K +P DF
Sbjct: 122 IAMIAALIEKGAAYVADNGDVLFDVSTFNDYGKLSKQDLSQLQAGARVDVDNSKADPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W SPWG GRPGWHIECSAM+ +LG FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKPAKAGEPSWPSPWGAGRPGWHIECSAMNKKHLGSHFDIHGGGSDLIFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A ++++++YW+H+G V +D KMSKSLGNFFTIR V+ Y +R FL+ +HYRS
Sbjct: 242 SCCANDSAYVNYWMHSGMVQVDDVKMSKSLGNFFTIRDVLSQYSAETVRYFLLSSHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++Y+ L+ A + +Y TL D A +L + T +++ F +M
Sbjct: 302 LSYTSDNLQQAHASLERLYGTLRDIAPAEALDE-------------TLYDRYWQRFCQAM 348
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD + L + + + K + A L A L ++ + VLGL+
Sbjct: 349 NDDFNVPEATPLLFELARDSQRM----KQQGDAESLAQAAQLTAVMKRLAAVLGLLQQA- 403
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ ++ A + A ++ I R AR NK++ +DA R L +G+ L D
Sbjct: 404 PEAFLQGQQDAAEVA-----RIEALIAQRENARANKDWAAADAARDQLTELGVVLEDGAG 458
Query: 555 GTTWR 559
GT WR
Sbjct: 459 GTRWR 463
>gi|358450731|ref|ZP_09161184.1| cysteinyl-tRNA synthetase [Marinobacter manganoxydans MnI7-9]
gi|357225107|gb|EHJ03619.1| cysteinyl-tRNA synthetase [Marinobacter manganoxydans MnI7-9]
Length = 462
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/486 (45%), Positives = 294/486 (60%), Gaps = 29/486 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+++++E +P GKV MYVCG+T YD H+GHARV V FDV+ RYLRH GY+V Y
Sbjct: 4 IYNTLTQQKEEFRPIEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVITRYLRHRGYDVNY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKI+ RA+E GE L+ R + H+D L L P EPR + ++ II
Sbjct: 64 VRNITDIDDKILRRADENGEPYDELTDRMIKAMHEDEARLGVLSPDEEPRATAYIDEIIA 123
Query: 198 MITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI +++ G AY D GDVYFSVD F +YG+LS +KLED AG RV V K++PADFAL
Sbjct: 124 MIHKLIAGGHAYAADNGDVYFSVDSFDDYGKLSKKKLEDLLAGARVDVQEAKRSPADFAL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GE W SPWG GRPGWHIECSAMS LG +FDIHGGG DL+FPHHENEIAQS
Sbjct: 184 WKAAKAGEVSWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLLFPHHENEIAQSE 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A ++ ++ W+H G + ++ EKMSKSLGNFFTIR++ME Y +R FL+ +HYRS ++
Sbjct: 244 CATGHTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIMEKYPAEVVRYFLVSSHYRSQVD 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHND-FLASMS 435
YS L A + +Y AL+ +P H++ F +M
Sbjct: 304 YSEENLAEAGRTLTRLYH---------------ALRGIVPAKAADVPESEHDERFAEAMD 348
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T +A L IN H R G++ + +S A L + + VLGL+
Sbjct: 349 DDFNTAGAIAVLHAVANEINQ--HRRDGREDDAK-QSAAILVR----LGGVLGLLQQD-P 400
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
E Q A +L+ + + I+ R ARK K + ++D IR +L GI L DS G
Sbjct: 401 EAFFQ----ADTGGELSAEDIEAMIQARADARKAKNFAEADRIRDELLEKGIILDDSREG 456
Query: 556 TTWRPA 561
TTWR A
Sbjct: 457 TTWRKA 462
>gi|409405694|ref|ZP_11254156.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. GW103]
gi|386434243|gb|EIJ47068.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. GW103]
Length = 463
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/496 (43%), Positives = 301/496 (60%), Gaps = 42/496 (8%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
++L +YNT++R ++ P GKV +YVCG+T YD HIGHARV V FD++ R+LR GY
Sbjct: 2 SELKIYNTLARDKQTFSPIEPGKVRLYVCGMTVYDYCHIGHARVLVVFDMVQRWLRACGY 61
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
V YVRN TD+DDKII RA E GE L+ R+ + ++D L P EPR + ++P
Sbjct: 62 AVTYVRNITDIDDKIIHRAAENGETIAQLTNRFIDAMNEDAAALGVQRPDHEPRATKYVP 121
Query: 194 HIIDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
++D+I ++ NG AY+ DGDV +SV FP YG+LSG+ L+D RAGERV V++ K++P
Sbjct: 122 KMLDLIGKLEKNGLAYKASDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDPL 181
Query: 253 DFALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHE 309
DF LWK+AK EP W+SPWG GRPGWHIECSAMS+ LG FDIHGGG DL FPHHE
Sbjct: 182 DFVLWKAAKPSEPDEAKWDSPWGCGRPGWHIECSAMSSDLLGDHFDIHGGGQDLQFPHHE 241
Query: 310 NEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGT 369
NEIAQS A ++ ++YW+HNGFV ID+EKMSKSLGNFFTIR V++ Y P LR F++
Sbjct: 242 NEIAQSEGAHQHTFVNYWMHNGFVRIDNEKMSKSLGNFFTIRDVLKKYDPEVLRFFILRA 301
Query: 370 HYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDT--VTSINKFH 427
HYRSP+NYS L+ A + + +Y L D +PP+ + +
Sbjct: 302 HYRSPLNYSDAHLDDARQALTRLYTALKD----------------VPPEAGGLLADESHA 345
Query: 428 NDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVL 487
F +++DD +T + ++ L + +N + QA +L++LA +L
Sbjct: 346 QRFTEALNDDFNTPMAVSVLFELANEVN----RDRSPVQARQLKALAG----------IL 391
Query: 488 GLMSTGYSEVLLQLREKALKRAD-LTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVG 546
GL+ E L + + AD L + ++ IE R A+ K++ ++D +R L G
Sbjct: 392 GLLQRAPDEYL----KGGVAAADGLGQAEIEALIEARKAAKAGKDFAEADRLRAVLTEAG 447
Query: 547 IALMDSPVG-TTWRPA 561
I L D P G T WR A
Sbjct: 448 IILEDKPGGLTEWRRA 463
>gi|440721391|ref|ZP_20901790.1| cysteinyl-tRNA ligase [Pseudomonas syringae BRIP34876]
gi|440724438|ref|ZP_20904720.1| cysteinyl-tRNA ligase [Pseudomonas syringae BRIP34881]
gi|443644740|ref|ZP_21128590.1| Cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae B64]
gi|440363812|gb|ELQ00971.1| cysteinyl-tRNA ligase [Pseudomonas syringae BRIP34876]
gi|440370082|gb|ELQ07028.1| cysteinyl-tRNA ligase [Pseudomonas syringae BRIP34881]
gi|443284757|gb|ELS43762.1| Cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae B64]
Length = 460
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 289/489 (59%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R E H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIEAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L K L + + A + F F +M
Sbjct: 302 INYSEDSLRESKAALERFYHAL----KGLPVAEPAGGE------------AFVERFSTAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL L +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDIAAAAGLAARLKQLAS-------VLGVLQLEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ LR A R D E + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 399 DF------LRAGAEGRVDAAEVEAL--IQARLAARAAKDWAESDRIRDQITAMGVLLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|422591326|ref|ZP_16665971.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|330878748|gb|EGH12897.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
str. M302280]
Length = 460
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/485 (45%), Positives = 288/485 (59%), Gaps = 30/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GY++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA + GE +L+ R + H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKPYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L K L ++ A + F F A+M
Sbjct: 302 INYSEDSLRESKAALERFYHAL----KGLPAVEPAGGE------------AFVERFTAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L + ++ IN L T G A LAA K + VL VL L + +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRET--GVTAAA---GLAARLKQLACVLGVLQLEADDF 400
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
LR A R D E + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 401 ------LRAGAQGRVDAAEVEAL--IQARLAARAAKDWAESDRIRDQITAMGVLLEDGKG 452
Query: 555 GTTWR 559
GTTWR
Sbjct: 453 GTTWR 457
>gi|241758928|ref|ZP_04757040.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
gi|241320749|gb|EER56982.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
Length = 477
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/503 (43%), Positives = 291/503 (57%), Gaps = 48/503 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFTPINPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY V+ DVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAVNDDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAHLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ E L + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPIEFL----QGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWRPALP 563
L I L D+ GTTWR P
Sbjct: 453 LLNEHKIILEDNAGGTTWRRGKP 475
>gi|403238385|ref|ZP_10916971.1| cysteinyl-tRNA ligase [Bacillus sp. 10403023]
Length = 465
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/486 (43%), Positives = 291/486 (59%), Gaps = 31/486 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++RK+E P E KV MYVCG T Y+ HIG+AR + FD + RY GY+V Y
Sbjct: 5 IYNTLTRKKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYFEFRGYDVNY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDK+I ANELGED +++ R+ + +D+ L C V PRV+++M IID
Sbjct: 65 VSNFTDVDDKLIKAANELGEDVPTIADRFINAYFEDVSALGCKKADVHPRVTENMEIIID 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++D GFAY +GDVY+ +F EYG+LS + +++ R G R+ V +K++ DF LW
Sbjct: 125 FIQALIDKGFAYESEGDVYYRTREFKEYGKLSHQSIDELRVGARIEVGDKKQDALDFVLW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
KSAK GE +WESPWG GRPGWHIECSAM+ YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KSAKPGEIYWESPWGEGRPGWHIECSAMAKRYLGDTIDIHAGGQDLAFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ +YW+HNG++ ID+EKMSKSLGNF + +M+ P LR F++ HYR PINY
Sbjct: 245 VNGKTFANYWMHNGYINIDNEKMSKSLGNFVLVHDIMKDVDPQVLRFFMLSVHYRHPINY 304
Query: 378 SVVQLES---ASERIFYIYQTL-HDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
S+ LES A ER+ Y L H + + +L + DS + +T+ F NDF+ +
Sbjct: 305 SLELLESTKNALERLRTSYSNLKHRLQSSTNLTN----DDSAWLEKITA---FRNDFIEA 357
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T ++ L + K N L + ++ + A + + + LGL
Sbjct: 358 MDDDFNTANAISVLFELSKQANYYLQEKNTSEKV-----IEAFLQEFEVLFSTLGLR--- 409
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L+ L ++++ I R ARKN+++ SD IR L A+ I L D+P
Sbjct: 410 ------------LEDEQLLDEEIEDLIAKRNQARKNRDFALSDQIRDQLKAMNIILEDTP 457
Query: 554 VGTTWR 559
GT W+
Sbjct: 458 QGTRWK 463
>gi|229591304|ref|YP_002873423.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
gi|259511840|sp|C3JYD3.1|SYC_PSEFS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229363170|emb|CAY50215.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
Length = 462
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 284/489 (58%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD HIGH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPSVAPAGGEAFVARFTEVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELAS-------VLGVLQMKPE 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L+ A R D E L I+ R AR NK++ +SD IR L A+G+ L D
Sbjct: 399 DF------LQAGAEGRVDAAEVDAL--IQARLAARANKDWAESDRIRDQLTAMGVVLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|255067745|ref|ZP_05319600.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
gi|255047956|gb|EET43420.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
Length = 483
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/501 (43%), Positives = 291/501 (58%), Gaps = 48/501 (9%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+L GY +
Sbjct: 12 LNLYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLCECGYPL 71
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +
Sbjct: 72 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQM 131
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF
Sbjct: 132 IAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 191
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQ
Sbjct: 192 VLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQ 251
Query: 315 SCAACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYH 358
S A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y
Sbjct: 252 SVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYD 311
Query: 359 PLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPD 418
P +R F++ HYRSP+NYS L+ A + +Y TL + A L A
Sbjct: 312 PEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFELSENA-------- 363
Query: 419 TVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEK 478
N + F A+M+DD T +A L + +N + A L
Sbjct: 364 -----NDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAYLAG 404
Query: 479 TIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAI 538
++ + ++GL+ +E L + L+ +++ I R AR +K + +SD I
Sbjct: 405 CLKALGGIIGLLQRDPTEFL----QGGAVSDGLSNEEIEDLIAQRKQARSDKNWAESDRI 460
Query: 539 RKDLAAVGIALMDSPVGTTWR 559
R L I L D+ GTTWR
Sbjct: 461 RDLLNEHKIILEDNAGGTTWR 481
>gi|424071451|ref|ZP_17808876.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|407998831|gb|EKG39229.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
Length = 460
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 290/489 (59%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R + H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L K L + + A + F F A+M
Sbjct: 302 INYSEDSLRESKAALERFYHAL----KGLPVAEPAGGE------------AFVERFSAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL L +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVAAAAGLAARLKQLAS-------VLGVLQLEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ LR A R D E + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 399 DF------LRAGAEGRVDAAEVEAL--IQARLAARAAKDWAESDRIRDQITAMGVLLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|120554762|ref|YP_959113.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
gi|187629847|sp|A1U1Q7.1|SYC_MARAV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120324611|gb|ABM18926.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
Length = 463
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/484 (45%), Positives = 290/484 (59%), Gaps = 29/484 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+++++E K GKV MYVCG+T YD H+GHARV V FDV+ RYLRH GY+V Y
Sbjct: 3 IYNTLTQQKEAFKTLEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVVTRYLRHRGYDVHY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKI+ RA+E GE L+ R H+D L L P+ EPR + + II
Sbjct: 63 VRNITDIDDKILRRADENGEVYTDLTDRMIRAMHEDEAKLGVLSPNEEPRATAFIDDIIA 122
Query: 198 MITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI +++ G AY D GDVYF+V+ FP+YG+LS +KLED AG RV V K++PADFAL
Sbjct: 123 MIQKLIAGGHAYAADNGDVYFAVESFPDYGKLSKKKLEDLVAGARVDVQEAKRSPADFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GE W+SPWG GRPGWHIECSAMS LG +FDIHGGG DL+FPHHENEIAQS
Sbjct: 183 WKAAKPGEVSWQSPWGEGRPGWHIECSAMSTKCLGDTFDIHGGGPDLLFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A ++ + W+H G + ++ EKMSKSLGNFFTIR+++E Y +R FL+ +HYRS ++
Sbjct: 243 CATGHTFVHTWMHAGAIRVNKEKMSKSLGNFFTIREILEKYPAEVVRYFLVSSHYRSQVD 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHN-DFLASMS 435
YS L A + +Y AL+ +P H+ F M
Sbjct: 303 YSEDNLAEAGRTLTKLYH---------------ALRGIVPAKEADVAETDHDRRFAEVMD 347
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T +A L ND+ H R+ + S A L + + VLGL+
Sbjct: 348 DDFNTAGAIAVLH---AVANDINHYRREGDEEAAKRSAAVLVR----LGAVLGLLQQN-P 399
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
E Q A ++LT + + I+ R ARK K++ ++D IR DL GI L DS G
Sbjct: 400 EAFFQ----ADTGSELTAEDIEAMIQARADARKAKDFAEADRIRDDLLEKGIILDDSREG 455
Query: 556 TTWR 559
TTWR
Sbjct: 456 TTWR 459
>gi|385337194|ref|YP_005891067.1| cysteinyl-tRNA synthetase [Neisseria meningitidis WUE 2594]
gi|319409608|emb|CBY89907.1| cysteinyl-tRNA synthetase (cysteine-tRNA ligase; CysRS) [Neisseria
meningitidis WUE 2594]
Length = 699
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 293/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 290 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE-- 577
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ + + F +M+DD T +A L + +N + A RL++L
Sbjct: 578 -AGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVN----KTNDAQLAGRLKALGG----- 627
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
++GL+ E L + L+ +++ I R AR +K + +SD IR
Sbjct: 628 -----IIGLLQRDPIEFL----QGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRD 678
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 679 LLNEHKIILEDNAGGTTWR 697
>gi|385340928|ref|YP_005894800.1| cysteinyl-tRNA synthetase [Neisseria meningitidis G2136]
gi|416180165|ref|ZP_11611350.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M6190]
gi|416185171|ref|ZP_11613345.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M13399]
gi|416193715|ref|ZP_11617271.1| cysteinyl-tRNA synthetase [Neisseria meningitidis ES14902]
gi|416209140|ref|ZP_11621220.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 961-5945]
gi|421543337|ref|ZP_15989432.1| cysteine--tRNA ligase [Neisseria meningitidis NM255]
gi|433468080|ref|ZP_20425527.1| cysteine--tRNA ligase [Neisseria meningitidis 87255]
gi|433470229|ref|ZP_20427634.1| cysteine--tRNA ligase [Neisseria meningitidis 98080]
gi|433493523|ref|ZP_20450604.1| cysteine--tRNA ligase [Neisseria meningitidis NM586]
gi|433495574|ref|ZP_20452632.1| cysteine--tRNA ligase [Neisseria meningitidis NM762]
gi|433503920|ref|ZP_20460871.1| cysteine--tRNA ligase [Neisseria meningitidis NM126]
gi|254671915|emb|CBA04234.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha275]
gi|325131324|gb|EGC54035.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M6190]
gi|325133259|gb|EGC55925.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M13399]
gi|325137353|gb|EGC59941.1| cysteinyl-tRNA synthetase [Neisseria meningitidis ES14902]
gi|325141357|gb|EGC63840.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 961-5945]
gi|325199172|gb|ADY94628.1| cysteinyl-tRNA synthetase [Neisseria meningitidis G2136]
gi|402314983|gb|EJU50550.1| cysteine--tRNA ligase [Neisseria meningitidis NM255]
gi|432200763|gb|ELK56852.1| cysteine--tRNA ligase [Neisseria meningitidis 98080]
gi|432200991|gb|ELK57078.1| cysteine--tRNA ligase [Neisseria meningitidis 87255]
gi|432225583|gb|ELK81324.1| cysteine--tRNA ligase [Neisseria meningitidis NM586]
gi|432227143|gb|ELK82855.1| cysteine--tRNA ligase [Neisseria meningitidis NM762]
gi|432238194|gb|ELK93770.1| cysteine--tRNA ligase [Neisseria meningitidis NM126]
Length = 473
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/499 (43%), Positives = 293/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE-- 351
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ + + F +M+DD T +A L + +N + A L +
Sbjct: 352 -ADDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKT--------------NDAQLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ +E L + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPTEFL----QGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|403054114|ref|ZP_10908598.1| cysteinyl-tRNA ligase [Acinetobacter bereziniae LMG 1003]
Length = 457
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/454 (45%), Positives = 282/454 (62%), Gaps = 25/454 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G+ V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVKY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARANE GE +L+ R+ + ++D +L CL P PR +D++ + +
Sbjct: 66 VRNITDIDDKIIARANENGESITALTDRFIQAMNEDAENLGCLHPDEAPRATDYIDQMQN 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V+KF YG+LSGRKL+D +AG ERV VD KK+P DF
Sbjct: 126 MIGHLVNKGAAYPSANGDVYFEVEKFARYGRLSGRKLDDMQAGASERVDVDVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ + +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTDEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S L+ A + Y ++ + L L ++ F F +M
Sbjct: 306 VNFSDFALKEAKTTLSRFYHAFKAYQQVYADLSTDVLDET-----------FVERFNIAM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T+ +A L + +K +N + ++ + T+R++ +LGL+
Sbjct: 355 RDDFNTSEAIAVLFEIIKELNRAVKEENAEQATLYY-------STLRHLTNILGLVQYNV 407
Query: 495 SEVL---LQLREKALKRADLTEDQVLQRIEDRTV 525
E L + L AD+T D + QR++ + +
Sbjct: 408 DEFLKSDIGQEALGLSEADIT-DFIQQRVDAKKI 440
>gi|416510386|ref|ZP_11736984.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416520758|ref|ZP_11740383.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416557371|ref|ZP_11759500.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|363549055|gb|EHL33412.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363554086|gb|EHL38325.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363578885|gb|EHL62687.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
Length = 461
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/485 (45%), Positives = 297/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE+ ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGENFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGED----MTAANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V LQ +A ++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PDVFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|385331930|ref|YP_005885881.1| cysteinyl-tRNA synthetase [Marinobacter adhaerens HP15]
gi|311695080|gb|ADP97953.1| cysteinyl-tRNA synthetase [Marinobacter adhaerens HP15]
Length = 462
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/486 (45%), Positives = 294/486 (60%), Gaps = 29/486 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+++++E +P GKV MYVCG+T YD H+GHARV V FDV+ RYLRH GY+V Y
Sbjct: 4 IYNTLTQQKEEFRPIEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVITRYLRHRGYDVNY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKI+ RA+E GE L+ R + H+D L L P EPR + ++ II
Sbjct: 64 VRNITDIDDKILRRADENGEPYDELTDRMIKAMHEDEARLGVLSPDEEPRATAYIDEIIA 123
Query: 198 MITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI +++ G AY D GDVYF+VD F +YG+LS +KLED AG RV V K++PADFAL
Sbjct: 124 MIHKLIAGGHAYAADNGDVYFAVDSFDDYGKLSKKKLEDLLAGARVDVQEAKRSPADFAL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GE W SPWG GRPGWHIECSAMS LG +FDIHGGG DL+FPHHENEIAQS
Sbjct: 184 WKAAKAGEVSWPSPWGDGRPGWHIECSAMSTCCLGETFDIHGGGPDLLFPHHENEIAQSE 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A ++ ++ W+H G + ++ EKMSKSLGNFFTIR++ME Y +R FL+ +HYRS ++
Sbjct: 244 CATGHTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIMEKYPAEVVRYFLVSSHYRSQVD 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHND-FLASMS 435
YS L A + +Y AL+ +P H++ F +M
Sbjct: 304 YSEENLAEAGRTLTRLYH---------------ALRGIVPAKAADVPESEHDERFAEAMD 348
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T +A L IN H R G++ + +S A L + + VLGL+
Sbjct: 349 DDFNTAGAIAVLHAVANEINQ--HRRDGREDDAK-QSAAILVR----LGGVLGLLQQD-P 400
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
E Q A +L+ + + I+ R ARK K + ++D IR +L GI L DS G
Sbjct: 401 EAFFQ----ADTGGELSAEDIEAMIQARADARKAKNFAEADRIRDELLEKGIILDDSREG 456
Query: 556 TTWRPA 561
TTWR A
Sbjct: 457 TTWRKA 462
>gi|387813875|ref|YP_005429358.1| cysteinyl-tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338888|emb|CCG94935.1| cysteinyl-tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 463
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/484 (45%), Positives = 290/484 (59%), Gaps = 29/484 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+++++E K GKV MYVCG+T YD H+GHARV V FDV+ RYLRH GY+V Y
Sbjct: 3 IYNTLTQQKEAFKTLEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVVTRYLRHRGYDVHY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKI+ RA+E GE L+ R H+D L L P+ EPR + + II
Sbjct: 63 VRNITDIDDKILRRADENGEVYTDLTDRMIRAMHEDEAKLGVLSPNDEPRATAFIDDIIA 122
Query: 198 MITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI +++ G AY D GDVYF+V+ FP+YG+LS +KLED AG RV V K++PADFAL
Sbjct: 123 MIQKLIAGGHAYAADNGDVYFAVESFPDYGKLSKKKLEDLVAGARVDVQEAKRSPADFAL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GE W+SPWG GRPGWHIECSAMS LG +FDIHGGG DL+FPHHENEIAQS
Sbjct: 183 WKAAKPGEVSWQSPWGEGRPGWHIECSAMSTKCLGDTFDIHGGGPDLLFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A ++ + W+H G + ++ EKMSKSLGNFFTIR+++E Y +R FL+ +HYRS ++
Sbjct: 243 CATGHTFVHTWMHAGAIRVNKEKMSKSLGNFFTIREILEKYPAEVVRYFLVSSHYRSQVD 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHN-DFLASMS 435
YS L A + +Y AL+ +P H+ F M
Sbjct: 303 YSEDNLAEAGRTLTKLYH---------------ALRGIVPAKGADVAETDHDRRFAEVMD 347
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T +A L ND+ H R+ + S A L + + VLGL+
Sbjct: 348 DDFNTAGAIAVLH---AVANDINHYRREGDEEAAKRSAAVLVR----LGAVLGLLQQN-P 399
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
E Q A ++LT + + I+ R ARK K++ ++D IR DL GI L DS G
Sbjct: 400 EAFFQ----ADTGSELTAEDIEAMIQARADARKAKDFAEADRIRDDLLEKGIILDDSREG 455
Query: 556 TTWR 559
TTWR
Sbjct: 456 TTWR 459
>gi|238754302|ref|ZP_04615659.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
gi|238707549|gb|EEP99909.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
Length = 463
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 290/485 (59%), Gaps = 26/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCG+T YDL HIGH R +V FDV+ RYLR+ GY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYSGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EP + H+ I
Sbjct: 62 TYVRNVTDVDDKIIKRAAENNETCDQLTSRMLAEMHKDFDALNLERPDLEPHATHHISEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ AY +GDV F+VD P+YG LS + LE +AG RV + K+NP DF
Sbjct: 122 IQLVQRLIERDHAYVAANGDVMFAVDSDPDYGLLSRQDLEQLQAGARVEIADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL +D A+ +F F A+M
Sbjct: 302 LNYSEENLKQARASLERLY-------TALRGMDTNAV--------AAGGEEFEARFRAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L KG+ A + L +R + VLGL++
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL----KGEDMA----AANGLAAELRKLAHVLGLLAQDP 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L + + +++E + L I+ R AR +K++ +D+ R L +GI L DSP
Sbjct: 399 EQFLQSSAQTDVDNNEVSEIEAL--IKQRNDARSSKDWALADSARDRLNEMGIVLEDSPQ 456
Query: 555 GTTWR 559
GT WR
Sbjct: 457 GTIWR 461
>gi|421539054|ref|ZP_15985225.1| cysteine--tRNA ligase [Neisseria meningitidis 93003]
gi|402315166|gb|EJU50732.1| cysteine--tRNA ligase [Neisseria meningitidis 93003]
Length = 473
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/502 (43%), Positives = 293/502 (58%), Gaps = 54/502 (10%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G++FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + AAA D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTP-------AAAF------DLS 350
Query: 421 TSINKFHNDFLASMSDDLHT---TVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALE 477
+ N + F A+M+DD T VL L+ + ND+ L
Sbjct: 351 ENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDV-----------------HLA 393
Query: 478 KTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDA 537
++ + ++GL+ E L + L+ +++ I R AR +K + +SD
Sbjct: 394 GCLKALGGIIGLLQRDPIEFL----QGGAVSDGLSNEEIDDLIARRKQARADKNWAESDR 449
Query: 538 IRKDLAAVGIALMDSPVGTTWR 559
IR L I L D+ GTTWR
Sbjct: 450 IRDLLNEHKIILEDNAGGTTWR 471
>gi|298159261|gb|EFI00319.1| Cysteinyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 460
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/487 (44%), Positives = 288/487 (59%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVARWLRFSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA + GE +L+ R + H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L K L + + A + F F +M
Sbjct: 302 INYSEDSLRESKAALERFYHAL----KGLPVAEPAGGE------------AFVERFSTAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L + ++ IN L + LAA K + +VL VL L + +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRES-----DVTAAAGLAARLKQLASVLGVLQLEADDF 400
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
LR A R D + + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 401 ------LRAGAEGRVDAAQVEAL--IQARLAARAAKDWAESDRIRDQITAMGVLLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|288550004|ref|ZP_05968971.2| cysteine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
gi|288316405|gb|EFC55343.1| cysteine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
Length = 465
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 292/489 (59%), Gaps = 30/489 (6%)
Query: 73 STQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLG 132
S+ L ++NTM+R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LG
Sbjct: 3 SSMLKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLG 62
Query: 133 YEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHM 192
Y + YVRN TD+DDKII RANE GE ++L R E H D L+ P EPR + H+
Sbjct: 63 YNLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHNDFDALNIQRPDSEPRATHHI 122
Query: 193 PHIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNP 251
IID+ ++++ G AY D GDV FSV P YGQLS + LE +AG RV V K+NP
Sbjct: 123 HEIIDITEKLIERGHAYVADNGDVMFSVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNP 182
Query: 252 ADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
DF LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENE
Sbjct: 183 MDFVLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPHHENE 242
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HY
Sbjct: 243 IAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHY 302
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RS +NYS L+ A + +Y L +K++ A F F+
Sbjct: 303 RSQLNYSEENLKQARSALERLYTALRGTDKSVPAAGGEA---------------FEARFV 347
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
M+DD +T + L D + +N L ++ + + AL +R + +VLGL+
Sbjct: 348 EVMNDDFNTPEAYSVLFDMAREVNRL--------KSEDMAAANALASHLRKLSSVLGLLE 399
Query: 492 TGYSEVLLQLREKALKRADLTE-DQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
L ++ +AD E ++ Q I+ R AR+ K++ +DA R L +GI L
Sbjct: 400 QEPDAFL-----QSGAQADEGEVAEIEQLIKARLEARQAKDWAAADAARNRLTEMGIILE 454
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 455 DGPQGTTWR 463
>gi|416552292|ref|ZP_11757008.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363564518|gb|EHL48565.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
Length = 461
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/485 (46%), Positives = 297/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID+ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IDLTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ AA + F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKS-----AAPAGGEV----------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGED----MTAANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V LQ +A ++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PDVFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|330830124|ref|YP_004393076.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
gi|423209170|ref|ZP_17195724.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER397]
gi|328805260|gb|AEB50459.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
gi|404619015|gb|EKB15935.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER397]
Length = 458
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/490 (44%), Positives = 294/490 (60%), Gaps = 37/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YD HIGH R +V FDV+ RYLR+ GY++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E L+ R + H D L + P +EPR + H+ I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +L+ AY D GDV F V+ + +YG+LSG+ LE +AG RV V K+NP DF
Sbjct: 122 IELVQSLLEKEHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L D L + AA + + F +M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRD----LPVAAAAGGDEQVAR------------FKEAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D ++ IN +++A + AAL +R + VLG
Sbjct: 346 DDDFNTPEAYSALFDLVREIN--------RQKAEDMVVAAALGARLRELGAVLG------ 391
Query: 495 SEVLLQLREKALKRADLTEDQV--LQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+LQ +A + D +++V ++R I +R AR +K + +DA R L +GI L D
Sbjct: 392 ---ILQQDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMGIVLED 448
Query: 552 SPVGTTWRPA 561
S T+WR A
Sbjct: 449 SAGKTSWRRA 458
>gi|423080651|ref|ZP_17069270.1| cysteine--tRNA ligase [Clostridium difficile 002-P50-2011]
gi|423085098|ref|ZP_17073555.1| cysteine--tRNA ligase [Clostridium difficile 050-P50-2011]
gi|357550746|gb|EHJ32555.1| cysteine--tRNA ligase [Clostridium difficile 050-P50-2011]
gi|357552715|gb|EHJ34482.1| cysteine--tRNA ligase [Clostridium difficile 002-P50-2011]
Length = 467
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/483 (42%), Positives = 293/483 (60%), Gaps = 23/483 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R +E P EGKV MYVCG T Y+ HIG+AR ++ FD L RYL + GY+V Y
Sbjct: 5 VYNTLTRAKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDVTY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII R++E G P ++ +Y +E+ D L +V P+V+D++ II+
Sbjct: 65 VQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++ D G+AY V+GDVYF +KF YG+LSG+K ED AG R+ V+ +K++P DF LW
Sbjct: 125 FIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFVLW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W+SPWG GRPGWHIECS MS YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+HNG++ I+ EKMSKS GNFFT+R + +LY +R F++ HYR+P+N+
Sbjct: 245 RSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPVNF 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L A + +Y T E LS L + L + + V ++ F F+ +M DD
Sbjct: 305 SDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEK-EIELVKELDNFRQKFIDAMDDD 363
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
++T ++ + + K IN + SL +K + + G+++
Sbjct: 364 VNTADAVSVIFELAKLINSNVDENS---------SLEFAKKCLDEFNELTGVLNI----- 409
Query: 498 LLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K+ D D+ ++ I+ RT A+KNKE++ +D IR+ L +GI L D+ G
Sbjct: 410 -------VNKKKDTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTRQGV 462
Query: 557 TWR 559
W+
Sbjct: 463 KWK 465
>gi|422650242|ref|ZP_16713048.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330963331|gb|EGH63591.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 460
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 285/485 (58%), Gaps = 30/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GY++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA + GE L+ R + H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDVLTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI +++ G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIEKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKPYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L K L D A + F F A+M
Sbjct: 302 INYSEDSLRESKAALERFYHAL----KGLPAADPAGGE------------AFVERFTAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L + ++ IN L T LAA K + +VL VL L + +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRET-----DVTAAAGLAARLKQLASVLGVLQLEADDF 400
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
LR A R D E + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 401 ------LRAGAQGRVDAAEVEAL--IQARLAARAAKDWAESDRIRDQITAMGVLLEDGKG 452
Query: 555 GTTWR 559
GTTWR
Sbjct: 453 GTTWR 457
>gi|66044980|ref|YP_234821.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
gi|75502675|sp|Q4ZVN9.1|SYC_PSEU2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|63255687|gb|AAY36783.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
Length = 460
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 289/489 (59%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R E H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIEAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L K L + + A + F F +M
Sbjct: 302 INYSEDSLRESKAALERFYHAL----KGLPVAEPAGGE------------AFVERFSTAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL L +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDIAAAACLAARLKQLAS-------VLGVLQLEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ LR A R D E + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 399 DF------LRAGAEGRVDAAEVEAL--IQARLAARAAKDWAESDRIRDRITAMGVLLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|262278507|ref|ZP_06056292.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
gi|262258858|gb|EEY77591.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
Length = 473
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/488 (44%), Positives = 300/488 (61%), Gaps = 25/488 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+ RK+ P+ EG + MYVCG+T YD HIGHARV V FD + R+LR G+ V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWSVRY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+RN TD+DDKII RANE GE L+ R+ + ++D +L C P P+ ++++ + +
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCAAPDEAPKATEYIDQMQN 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKNPADF 254
MI +++ G AY +GDVYF V KF +YG+LSGRKL+D +AG ERV V+ KK+P DF
Sbjct: 126 MIGNLVNKGSAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AKE EP W SPWG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A+ +++YW+H GF+ +D EKMSKSLGNFFTIR VME +HP +R F++ +HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S V L+ A + Y + ++ L S I +F+N +M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSF-------IERFNN----AM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + K +N + + + + L T+R++ +LGL+
Sbjct: 355 CDDFNTAEAMAVLFELNKELNRAVKEEQADQATV-------LYSTLRHLTNILGLVQHDV 407
Query: 495 SEVLLQ-LREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L + ++AL L++ ++ I+ R A+K K++ K+D IR+ L G+ L D+
Sbjct: 408 DAFLKSDIGQEALT---LSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR 464
Query: 554 VGTTWRPA 561
GT WR A
Sbjct: 465 QGTVWRRA 472
>gi|167550932|ref|ZP_02344688.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205324269|gb|EDZ12108.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 461
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/485 (45%), Positives = 296/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGTDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGED----MTAANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V LQ +A ++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PDVFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|156934911|ref|YP_001438827.1| hypothetical protein ESA_02760 [Cronobacter sakazakii ATCC BAA-894]
gi|156533165|gb|ABU77991.1| hypothetical protein ESA_02760 [Cronobacter sakazakii ATCC BAA-894]
Length = 479
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/489 (45%), Positives = 294/489 (60%), Gaps = 36/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NTMSR++E KP G+VGMYVCG+T YDL HIGH R ++ FDV+ RYLR LGY++
Sbjct: 20 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 79
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GED ++L R E H+D L+ L P EPR + H+P I
Sbjct: 80 KYVRNITDIDDKIIKRANENGEDFVALVDRMVTEMHKDFDALNILRPDSEPRATQHIPEI 139
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ Q++ G AY +GDV F+V+ +YG+LS + LE +AG RV V K+NP DF
Sbjct: 140 IEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRNPMDF 199
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 200 VLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 259
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 260 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 319
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA+A TV F F+ +M
Sbjct: 320 LNYSEENLKQARASLERLY-------TALRGTDASA--------TVAGGEAFEARFVEAM 364
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L +A + L +R + VLGL+
Sbjct: 365 NDDFNTPEAYSVLFDMAREVNRL--------KAEDSSAANQLAAHLRKLAAVLGLLE--- 413
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGIALM 550
Q E+ L+ D + IE R ARK K++ +DA R L +GI L
Sbjct: 414 -----QEPEQFLQSGAQANDDEVAEIEALIVKRLEARKAKDWAAADAARDRLNEMGIILE 468
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 469 DGPQGTTWR 477
>gi|350545604|ref|ZP_08915076.1| Cysteinyl-tRNA synthetase [Candidatus Burkholderia kirkii UZHbot1]
gi|350526661|emb|CCD39993.1| Cysteinyl-tRNA synthetase [Candidatus Burkholderia kirkii UZHbot1]
Length = 465
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/490 (44%), Positives = 286/490 (58%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R ++ P G+V MYVCG+T YD HIGHARV V FD++ R+LR LGY+V
Sbjct: 4 LRIYNTLARDKQTFTPLRAGEVRMYVCGMTVYDYCHIGHARVMVVFDIVQRWLRTLGYKV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E SL+ R+ + H+D L PP +EP ++ +P +
Sbjct: 64 TYVRNITDIDDKIIRRAVENNEPIKSLTHRFIQAMHEDADALGVAPPDIEPHATEFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI + NG+AY DGDV ++V KF +YG+LSG+ LED RAGERVA + K++P DF
Sbjct: 124 LGMIDALQANGYAYHAKDGDVNYAVRKFADYGRLSGKSLEDLRAGERVAANDAKQDPLDF 183
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AK EP W+S WG GRPGWHIECSAM A LG FDIHGGGMDL FPHHENE
Sbjct: 184 VLWKQAKADEPADSGWDSKWGRGRPGWHIECSAMGCALLGEQFDIHGGGMDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A ++YW+HNGFV IDSEKMSKSLGNF TIR+V+E + +R F+ HY
Sbjct: 244 IAQSEGATGKRFVNYWMHNGFVQIDSEKMSKSLGNFLTIREVLEKFDAEVVRFFIARAHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDF 430
RSP+NYS V ++ A + +Y ALKD P + N+ F
Sbjct: 304 RSPLNYSDVHIDDAKNGLTRLY---------------TALKDVKPDNQPLDWNEADVQRF 348
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
++M+DD +T V ++ L D +N ++ L L + R
Sbjct: 349 QSAMNDDFNTPVAVSVLFDLASEVNRTRDAALARQLKGLAGVLGLLGREPR--------- 399
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
+ LQ L ++ +I +R A++ K Y ++D IR +L GIAL
Sbjct: 400 ------IFLQQAAGTGAEQGLWPQEIEAKIAERIAAKQAKNYAEADRIRAELLEAGIALE 453
Query: 551 DSPVGTT-WR 559
D P G+T WR
Sbjct: 454 DKPGGSTEWR 463
>gi|315127193|ref|YP_004069196.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
gi|315015707|gb|ADT69045.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
Length = 459
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/488 (44%), Positives = 285/488 (58%), Gaps = 36/488 (7%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E KP V+GK+ MYVCG+T YD HIGHAR +V FDV+ RYLRHLGY++ Y
Sbjct: 4 IYNTLTRQKEEFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHLGYDLKY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TDVDDKII RANE GE L+ R + H+D L+ L P +EP V+ HM II
Sbjct: 64 VRNITDVDDKIIKRANENGEAINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTGHMDEIIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
M+ +++ G AY DGDV F V F +YG LS + L ++G RV V K +P DF L
Sbjct: 124 MVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK GEP W SPWG GRPGWHIECSAMS+ +LG FDIHGGG DL FPHHENEIAQSC
Sbjct: 184 WKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQSC 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A N +++ WIH G V ++ EKMSKSL NFFT+R+V++ Y ++R FLI HYRS +N
Sbjct: 244 CANNGQYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKQYDAESVRYFLISGHYRSQLN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L+ A + IY L E P + N++ F +M+D
Sbjct: 304 YSQENLDQARSSLERIYTALRGVE---------------PVECELEGNEYVAKFRKAMND 348
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D ++ L + + K +N + + E L +R++ +LG+
Sbjct: 349 DFNSPEALPVVFEVAKELNRVKDSDS--------EKAGHLAFILRSLGEILGIA------ 394
Query: 497 VLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
Q +A + +D+V + I R AR +K + +D R L A+G+ L DS
Sbjct: 395 ---QQAPEAFLQGGQNDDEVAEIEALIVKRNDARASKNWAAADEARDALNALGVVLEDSA 451
Query: 554 VGTTWRPA 561
TTWR A
Sbjct: 452 GKTTWRKA 459
>gi|254804107|ref|YP_003082328.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
gi|254667649|emb|CBA03462.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
Length = 475
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 290/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 6 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 66 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 126 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 185
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 186 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 245
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 246 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 305
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A L A
Sbjct: 306 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFGLSENA---------- 355
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
N + F A+M+DD T +A L + +N + A L +
Sbjct: 356 ---NDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAHLAGCL 398
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ E L + L+ +++ I R AR +K + +SD IR
Sbjct: 399 KALGGIIGLLQRDPIEFL----QGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRD 454
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 455 LLNEHKIILEDNAGGTTWR 473
>gi|402566136|ref|YP_006615481.1| cysteinyl-tRNA synthetase [Burkholderia cepacia GG4]
gi|402247333|gb|AFQ47787.1| cysteinyl-tRNA synthetase [Burkholderia cepacia GG4]
Length = 465
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 301/489 (61%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R +++ P+ G+V MYVCG+T YD H+GHAR+ V FD++ R+LR +G+ V
Sbjct: 4 LRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGFRV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+ R+ H+D L P +EPR + +P +
Sbjct: 64 TYVRNITDIDDKIIRRAVENGETIKSLTDRFIGAMHEDEAALGIQRPDIEPRATQFIPQM 123
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++ NG+AY+ DGDV +SV KF YG+LSG+ L+D RAGERVA + K++P DF
Sbjct: 124 LGMIEKLETNGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLDF 183
Query: 255 ALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AK +P W S +G GRPGWHIECSAM LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKRAKAEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGFV +D+EKMSKSLGNFFTIR+V+E Y +R F++ THY
Sbjct: 244 IAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRFFIVRTHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RSP+NYS V L+ A + +Y L D E D AL + P + F
Sbjct: 304 RSPLNYSDVHLDDARASLTRLYTALKDVEP-----DTLALDWNEP---------YAQRFA 349
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A+M+DD++T V +A L + +N TR A+L + ++ + +LGL+
Sbjct: 350 AAMNDDINTPVAVATLFELAGEVN---RTRD-----------ASLARQLKQLAGLLGLLG 395
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LQ A + L D++ +I R A++ K+Y ++D IR +L VGIAL D
Sbjct: 396 R-EPRAFLQQGTGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLEVGIALED 454
Query: 552 SPVGTT-WR 559
P G+T WR
Sbjct: 455 KPGGSTEWR 463
>gi|255527266|ref|ZP_05394147.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296187245|ref|ZP_06855641.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|255509051|gb|EET85410.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296048116|gb|EFG87554.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
Length = 465
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/484 (41%), Positives = 299/484 (61%), Gaps = 21/484 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
++NT++RK+E P E +V MYVCG T Y+ HIG+AR +V FD + RYL + GY+V +
Sbjct: 3 VFNTIARKKEEFIPLSEKEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKVKF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTD+DDK+I RA E L ++ EE+++D L+ +V PR ++++ I+D
Sbjct: 63 IQNFTDIDDKMIKRAKEDNITVKELGDKFIEEYYKDADSLNIERATVNPRATEYINEIVD 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ +++D G+AY VDGDVYF KF +YG+LSG+ LED +AG R++VD RKK+P DFA+W
Sbjct: 123 FVKELIDRGYAYEVDGDVYFHTKKFKDYGKLSGQNLEDLQAGARISVDERKKDPMDFAVW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
KS K GEP W+SPWG GRPGWHIECS M+ LG + DIH GG DL FPHHENE+AQS A
Sbjct: 183 KSQKPGEPAWKSPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLAFPHHENEVAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+H+ FV +++EKMSKSL NFFT R+++E Y +RLF++ HYR+ IN+
Sbjct: 243 RTGKTFAKYWMHSAFVNVNNEKMSKSLNNFFTAREILEKYDSDVIRLFMLSGHYRTQINF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S+ LES + +Y ++ + E L L D + + ++ + ++ M DD
Sbjct: 303 SMESLESMKAAMDRLYNSISNLESLLEETKQEELMDQ-EVEYIKILDGYKEKYIEKMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T ++ + D ++ IN ++++S L K N++ LG
Sbjct: 362 FNTADAVSVIFDLIRDIN----------TNVKIDSSKKLIKHCLNLIKELGKP------- 404
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
L + +K+ K+ +L E+++ IE+R ARK+K + SD IR DL GI L D+P G
Sbjct: 405 -LGILQKS-KKGNL-EEKIEALIEERQQARKDKNWALSDKIRDDLKEQGILLEDTPQGVR 461
Query: 558 WRPA 561
W+ A
Sbjct: 462 WKRA 465
>gi|187608842|sp|A7MK00.2|SYC_CROS8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 461
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/489 (45%), Positives = 294/489 (60%), Gaps = 36/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NTMSR++E KP G+VGMYVCG+T YDL HIGH R ++ FDV+ RYLR LGY++
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GED ++L R E H+D L+ L P EPR + H+P I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVTEMHKDFDALNILRPDSEPRATQHIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ Q++ G AY +GDV F+V+ +YG+LS + LE +AG RV V K+NP DF
Sbjct: 122 IEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA+A TV F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLY-------TALRGTDASA--------TVAGGEAFEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L +A + L +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KAEDSSAANQLAAHLRKLAAVLGLLE--- 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGIALM 550
Q E+ L+ D + IE R ARK K++ +DA R L +GI L
Sbjct: 396 -----QEPEQFLQSGAQANDDEVAEIEALIVKRLEARKAKDWAAADAARDRLNEMGIILE 450
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 451 DGPQGTTWR 459
>gi|421566414|ref|ZP_16012164.1| cysteine--tRNA ligase [Neisseria meningitidis NM3081]
gi|402340327|gb|EJU75529.1| cysteine--tRNA ligase [Neisseria meningitidis NM3081]
Length = 473
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/502 (43%), Positives = 293/502 (58%), Gaps = 54/502 (10%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G++FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + AAA D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTP-------AAAF------DLS 350
Query: 421 TSINKFHNDFLASMSDDLHT---TVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALE 477
+ N + F A+M+DD T VL L+ + ND+ L
Sbjct: 351 ENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDV-----------------HLA 393
Query: 478 KTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDA 537
++ + ++GL+ E L + L+ +++ I R AR +K + +SD
Sbjct: 394 GCLKALGGIIGLLQRDPIEFL----QGGAVSDGLSNEEIDDLIARRKQARADKNWAESDH 449
Query: 538 IRKDLAAVGIALMDSPVGTTWR 559
IR L I L D+ GTTWR
Sbjct: 450 IRDLLNEHKIILEDNAGGTTWR 471
>gi|365539623|ref|ZP_09364798.1| cysteinyl-tRNA synthetase [Vibrio ordalii ATCC 33509]
Length = 460
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/488 (45%), Positives = 298/488 (61%), Gaps = 35/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E KP KVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNSITRQKEEFKPIHANKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R + H D L+ P VEPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIADMHADFDALNMKRPDVEPRATAYIQEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY +GDV F V KF EYG+LS + L+ +AG RV VD K++P DF
Sbjct: 122 IGLVQRLIERGFAYVASNGDVMFEVSKFDEYGKLSKQDLDQLQAGARVDVDLAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM++A LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGEGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTPYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L + L L ++P V ++ + F +M
Sbjct: 302 LNYSEDNLKQARASLERLYTAL----RGLDL--------TVP---VAGGEEYVSRFTIAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + IN L + +QA +AL +R + V+G
Sbjct: 347 DDDFNTPEAYSVLFDMARDINKL--KTENHQQA------SALGALMRELADVIG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+L Q E LK +DQV + I+ R +R K++ +D R L +GI L D
Sbjct: 393 --ILHQDPEVFLKGDTNGDDQVAEIEALIKLRNDSRAAKDWANADVARDKLNELGIILED 450
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 451 GPSGTTWR 458
>gi|325981668|ref|YP_004294070.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
gi|325531187|gb|ADZ25908.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
Length = 459
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/490 (44%), Positives = 290/490 (59%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R+++ P GKV +YVCG+T YD H+GHARV V FD + R+ + V
Sbjct: 2 LKIYNSIAREKQDFVPITPGKVKLYVCGMTVYDYCHLGHARVLVVFDTVVRWFEANDFTV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E +L++R+ + ++D V L P+ EP + H+ +
Sbjct: 62 NYVRNITDIDDKIIKRAQENNESIEALTQRFIQAMNEDSVALGVSSPTHEPCATHHVKSM 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI+ +++ AY+ +GDVYFSV FP YG+LSG+ L D RAGERV +DS KK+P DF
Sbjct: 122 IGMISTLVEKNLAYQAHNGDVYFSVHNFPGYGKLSGKSLNDLRAGERVDIDSSKKDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWKSAK GEPFWESPWGPGRPGWHIECSAM +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKSGEPFWESPWGPGRPGWHIECSAMCEQFLGEHFDIHGGGQDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A ++ ++YW+HNGFV +D+EKMSKSLGNFFT+R++++LY P +R F++ HYRSP
Sbjct: 242 SEGAHDHPFVNYWMHNGFVRVDNEKMSKSLGNFFTVREILKLYQPEVVRFFILRAHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSIN---KFHNDFL 431
+NYS Q L D + AL L ALK+ + P +V ++ + F
Sbjct: 302 LNYSD--------------QHLKDTKLALDRL-YIALKE-VEPISVARVDWNYPYAQKFK 345
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M DD +T +A L D IN L L++ + L
Sbjct: 346 RAMDDDFNTPDAIALLFDLASDINKTGSREHAGLLKALGGLLGLLQQNPQEYLQ------ 399
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ A + + V Q I++R ARK Y +D IRK L GI L D
Sbjct: 400 ----------NKAASSELNSSAHDVEQLIQERINARKEGRYSDADTIRKQLQEQGIILED 449
Query: 552 SPVGTTWRPA 561
S GTTWR A
Sbjct: 450 SSQGTTWRRA 459
>gi|416526740|ref|ZP_11742645.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416536050|ref|ZP_11748117.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363557792|gb|EHL41997.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363565156|gb|EHL49192.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
Length = 461
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/485 (46%), Positives = 297/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID+ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IDLTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ A + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGEDMA----AANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V LQ +A ++ E + L I+ R ARK K++ +DA R LA +GI L D P
Sbjct: 398 PDVFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|416044172|ref|ZP_11574948.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|416058943|ref|ZP_11580697.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|347996476|gb|EGY37551.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|347999327|gb|EGY40169.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
Length = 469
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/490 (45%), Positives = 291/490 (59%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NT++R++E+ KP GK+GMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E ++D L+ L P EPR + H+P I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID++ +++ G AY D GDV F V+ F +YG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 132 IDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H+G + +D EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +K+ D+ F +M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGIDKSAVAFGGENFVDA---------------FREAM 356
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T L+ L + + +N L K A RL LAA +LG
Sbjct: 357 DDDFNTPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAA----------ILG---- 402
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LLQL + +A ED+V + I+ R AR K++ +DA R L +GI L
Sbjct: 403 -----LLQLDPEQFLQAGSDEDEVAKIEALIKQRNEARTAKDWAAADAARNALTKMGIIL 457
Query: 550 MDSPVGTTWR 559
D P GTTWR
Sbjct: 458 EDGPNGTTWR 467
>gi|257483826|ref|ZP_05637867.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|289625911|ref|ZP_06458865.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289651301|ref|ZP_06482644.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
2250]
gi|422583557|ref|ZP_16658680.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|422595324|ref|ZP_16669612.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|422606355|ref|ZP_16678365.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
301020]
gi|330868387|gb|EGH03096.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330890007|gb|EGH22668.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
301020]
gi|330985629|gb|EGH83732.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 460
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/487 (44%), Positives = 288/487 (59%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA + GE +L+ R + H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L K L + + A + F F +M
Sbjct: 302 INYSEDSLRESKAALERFYHAL----KGLPVAEPAGGE------------AFVERFSTAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L + ++ IN L + LAA K + +VL VL L + +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRES-----DVTAAAGLAARLKQLASVLGVLQLEADDF 400
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
LR A R D + + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 401 ------LRAGAEGRVDAAQVEAL--IQARLAARAAKDWAESDRIRDQITAMGVLLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|421263687|ref|ZP_15714715.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. P52VAC]
gi|401689234|gb|EJS84709.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. P52VAC]
Length = 459
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/490 (44%), Positives = 292/490 (59%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP KVGMYVCG+T YDL H+GH R +V FDV+ RYLR+LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L + E H+D L+ L P VEPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI +++ AY +GDV F V+ F EYG+LS + LE +AG RV + + KKNP DF
Sbjct: 122 IAMIEKLIARQHAYVSANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GE W SPWG GRPGWHIECSAM+ LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGETSWPSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YWIH+G + +D EKMSKSLGNFFT+R+V+ LY ++R FL+ HYRS
Sbjct: 242 SCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLE---SASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
+NYS L SA ER++ AL+ + P T + F
Sbjct: 302 LNYSEENLNLAHSALERLY------------------TALRGTDPTAVATEGQNYLAAFR 343
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M DD +T ++ L + + IN L + ++ +LAA +R + +LGL
Sbjct: 344 EAMDDDFNTPKAISVLFEIAREINKL-----KNEDILKANALAA---RLRELAGILGL-- 393
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQR--IEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
L Q E+ L+ ++ L I+ R AR K++ +DA R LA +G+ L
Sbjct: 394 ------LYQDPEQFLQSGSDNDEVALIEALIKQRNDARAAKDWASADAARNKLAEMGVVL 447
Query: 550 MDSPVGTTWR 559
D+ TTWR
Sbjct: 448 EDNVNATTWR 457
>gi|107028742|ref|YP_625837.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
gi|116690099|ref|YP_835722.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
gi|254247826|ref|ZP_04941147.1| Cysteinyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
PC184]
gi|123370109|sp|Q1BHP1.1|SYC_BURCA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166200131|sp|A0K8K2.1|SYC_BURCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|105897906|gb|ABF80864.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
gi|116648188|gb|ABK08829.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
gi|124872602|gb|EAY64318.1| Cysteinyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
PC184]
Length = 465
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/491 (45%), Positives = 298/491 (60%), Gaps = 38/491 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R +++ P+ G+V MYVCG+T YD H+GHAR+ V FD++ R+LR +GY V
Sbjct: 4 LRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYRV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+ R+ H+D L P VEPR + +P +
Sbjct: 64 TYVRNITDIDDKIIRRAVENGETIKSLTDRFIGAMHEDETALGIQRPDVEPRATQFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI + NG+AY+ DGDV +SV KF +YG+LSG+ L+D RAGERVA + K++P DF
Sbjct: 124 LGMIETLETNGYAYQAADGDVNYSVRKFADYGKLSGKSLDDLRAGERVAANDAKQDPLDF 183
Query: 255 ALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AK EP W S +G GRPGWHIECSAM + LG+ FDIHGGG DL FPHHENE
Sbjct: 184 VLWKRAKADEPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGFV +D+EKMSKSLGNFFTIR+V+E Y +R F++ THY
Sbjct: 244 IAQSEGATGETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVVRFFIVRTHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVT-SINKFH-ND 429
RSP+NYS V L+ A + +Y L D E PDT+ N+ H
Sbjct: 304 RSPLNYSDVHLDDARASLTRLYTALKDVE----------------PDTLALDWNEPHAQR 347
Query: 430 FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGL 489
F A+M+DD +T V +A L + +N R SLA K + +L +LG
Sbjct: 348 FAAAMNDDFNTPVAVATLFELAGEVN-----------RTRDASLARQLKQLAGLLGLLGR 396
Query: 490 MSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
+ + + AD E Q+ R+ A++ K+Y ++D IR +L GIAL
Sbjct: 397 EPRAFLQQASGAAQAGGLAADEIEAQIAARV----AAKQAKDYAEADRIRAELLEAGIAL 452
Query: 550 MDSPVGTT-WR 559
D P G+T WR
Sbjct: 453 EDKPGGSTEWR 463
>gi|419136924|ref|ZP_13681722.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
gi|377984810|gb|EHV48038.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
Length = 460
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/486 (43%), Positives = 291/486 (59%), Gaps = 35/486 (7%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
L NT+ ++EL+ P E K+GMYVCGVT YDL H+GHAR +V FD++ RYLR GY+V +
Sbjct: 4 LTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYDVTF 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RA + GED SL+ R E H D L LPP++EPR ++H+P II
Sbjct: 64 VRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTEHIPQIIS 123
Query: 198 MITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++L FAY + GDV FS YG+LSG+ + RAG R+ V+ K++P DF L
Sbjct: 124 MIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AK GEP W SPWG GRPGWHIECSAM+ YLG FDIHGGG DL+FPHHENEIAQS
Sbjct: 184 WKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHENEIAQST 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
+A + +++YW+H G VT++ EKMSKSL +FFT+R ++ + ++R FL+ HYR P+N
Sbjct: 244 SANDGPYVNYWLHTGMVTVNKEKMSKSLNSFFTLRDILNRFDAQSVRFFLLSAHYRKPLN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS + A + +Y + + S + + F +M D
Sbjct: 304 YSEENIHLARASLTRLYTACQFADGSRS----------------EQHDAWRARFCGAMDD 347
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L + + IN L T + AAL T++++ VLGL+
Sbjct: 348 DFNTPQALAILFELTREINRLCGTND--------DEAAALATTLKDLGNVLGLLEQSADA 399
Query: 497 VLLQLREKALKRADL--TEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L R+DL E Q++++ I R+ AR+ +++K+D +R +LA GI L D
Sbjct: 400 FLKN-------RSDLHPAELQLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLEDVG 452
Query: 554 VGTTWR 559
T+WR
Sbjct: 453 ENTSWR 458
>gi|423089340|ref|ZP_17077700.1| cysteine--tRNA ligase [Clostridium difficile 70-100-2010]
gi|357558276|gb|EHJ39775.1| cysteine--tRNA ligase [Clostridium difficile 70-100-2010]
Length = 467
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/483 (42%), Positives = 293/483 (60%), Gaps = 23/483 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R +E P EGKV MYVCG T Y+ HIG+AR ++ FD L RYL + GY+V Y
Sbjct: 5 VYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDVTY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII R++E G P ++ +Y +E+ D L +V P+V+D++ II+
Sbjct: 65 VQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++ D G+AY V+GDVYF +KF YG+LSG+K ED AG R+ V+ +K++P DF LW
Sbjct: 125 FIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFVLW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W+SPWG GRPGWHIECS MS YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+HNG++ I+ EKMSKS GNFFT+R + +LY +R F++ HYR+P+N+
Sbjct: 245 RSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPVNF 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L A + +Y T E LS L + L + + V ++ F F+ +M DD
Sbjct: 305 SDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEK-EVELVKELDDFRQKFIDAMDDD 363
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
++T ++ + + K IN + SL +K + + G+++
Sbjct: 364 VNTADAVSVIFELAKLINSNVDENS---------SLEFAKKCLDEFNELTGVLNI----- 409
Query: 498 LLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K+ D D+ ++ I+ RT A+KNKE++ +D IR+ L +GI L D+ G
Sbjct: 410 -------VNKKKDTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTRQGV 462
Query: 557 TWR 559
W+
Sbjct: 463 KWK 465
>gi|16759512|ref|NP_455129.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142716|ref|NP_806058.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56414312|ref|YP_151387.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161615258|ref|YP_001589223.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168239036|ref|ZP_02664094.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168240371|ref|ZP_02665303.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168465640|ref|ZP_02699522.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194442819|ref|YP_002039781.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194451708|ref|YP_002044570.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194734068|ref|YP_002113550.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197363232|ref|YP_002142869.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198241911|ref|YP_002214492.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389934|ref|ZP_03216545.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|213162267|ref|ZP_03347977.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213423442|ref|ZP_03356426.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213427916|ref|ZP_03360666.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213586100|ref|ZP_03367926.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213617481|ref|ZP_03372307.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213647061|ref|ZP_03377114.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|289823986|ref|ZP_06543585.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|375117973|ref|ZP_09763140.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|378960494|ref|YP_005217980.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|386590471|ref|YP_006086871.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|416424774|ref|ZP_11691955.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416432900|ref|ZP_11696505.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416440170|ref|ZP_11700751.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416444471|ref|ZP_11703704.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416453677|ref|ZP_11709751.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416458657|ref|ZP_11713176.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416465692|ref|ZP_11717014.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416478343|ref|ZP_11721707.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416490174|ref|ZP_11726680.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416501486|ref|ZP_11732076.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416542410|ref|ZP_11751580.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416576758|ref|ZP_11769340.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416583650|ref|ZP_11773406.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416594999|ref|ZP_11780813.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416596677|ref|ZP_11781569.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416605824|ref|ZP_11787256.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416614650|ref|ZP_11792902.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416623468|ref|ZP_11797443.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416633974|ref|ZP_11802255.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416638936|ref|ZP_11804235.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416648571|ref|ZP_11809216.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416670853|ref|ZP_11820342.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416681864|ref|ZP_11823863.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416693733|ref|ZP_11826833.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416706889|ref|ZP_11832078.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416713303|ref|ZP_11836945.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416719366|ref|ZP_11841222.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416723502|ref|ZP_11844168.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416733637|ref|ZP_11850598.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416739762|ref|ZP_11853992.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416745200|ref|ZP_11857132.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416757240|ref|ZP_11863070.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416764316|ref|ZP_11867920.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416766726|ref|ZP_11869342.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|418485343|ref|ZP_13054327.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418491010|ref|ZP_13057539.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418493088|ref|ZP_13059556.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418498170|ref|ZP_13064585.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418504464|ref|ZP_13070822.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418507905|ref|ZP_13074213.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418525684|ref|ZP_13091664.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|418763106|ref|ZP_13319230.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418766639|ref|ZP_13322711.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418771811|ref|ZP_13327817.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418774939|ref|ZP_13330900.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418781109|ref|ZP_13336994.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418784571|ref|ZP_13340408.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418788084|ref|ZP_13343882.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418793959|ref|ZP_13349685.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418799466|ref|ZP_13355132.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418804829|ref|ZP_13360433.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|418807689|ref|ZP_13363247.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418812228|ref|ZP_13367752.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418815587|ref|ZP_13371088.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418821233|ref|ZP_13376658.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418828661|ref|ZP_13383682.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|418831865|ref|ZP_13386815.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418835867|ref|ZP_13390758.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418838852|ref|ZP_13393694.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418844306|ref|ZP_13399098.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418854017|ref|ZP_13408701.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|418860895|ref|ZP_13415470.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418864745|ref|ZP_13419269.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418866398|ref|ZP_13420861.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|419727697|ref|ZP_14254665.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419734001|ref|ZP_14260896.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419739729|ref|ZP_14266473.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419745923|ref|ZP_14272533.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419749653|ref|ZP_14276132.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|419788833|ref|ZP_14314516.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419793876|ref|ZP_14319492.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|421570132|ref|ZP_16015825.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421577364|ref|ZP_16022952.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421581953|ref|ZP_16027494.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421584647|ref|ZP_16030155.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|445144283|ref|ZP_21387032.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445150875|ref|ZP_21389941.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|21264006|sp|Q8Z8P6.1|SYC_SALTI RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216133|sp|Q5PCE2.1|SYC_SALPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187631630|sp|A9MW31.1|SYC_SALPB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710850|sp|B5FLP7.1|SYC_SALDC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558785|sp|B4TA89.1|SYC_SALHS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558786|sp|B4SXP2.1|SYC_SALNS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558787|sp|B5BCZ8.1|SYC_SALPK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558788|sp|B4TN59.1|SYC_SALSV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|25293235|pir||AC0569 cysteinyl-tRNA synthetase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16501804|emb|CAD05021.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138347|gb|AAO69918.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56128569|gb|AAV78075.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161364622|gb|ABX68390.1| hypothetical protein SPAB_03027 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401482|gb|ACF61704.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194410012|gb|ACF70231.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194709570|gb|ACF88791.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195631983|gb|EDX50503.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197094709|emb|CAR60239.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197288172|gb|EDY27557.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197936427|gb|ACH73760.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199602379|gb|EDZ00925.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205339820|gb|EDZ26584.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|322614796|gb|EFY11725.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618903|gb|EFY15791.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623610|gb|EFY20449.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629091|gb|EFY25870.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631812|gb|EFY28566.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637451|gb|EFY34153.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642135|gb|EFY38745.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322645840|gb|EFY42361.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649781|gb|EFY46206.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653205|gb|EFY49538.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322660646|gb|EFY56882.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664798|gb|EFY60991.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322669149|gb|EFY65299.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322670695|gb|EFY66828.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322679067|gb|EFY75122.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682094|gb|EFY78119.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322685076|gb|EFY81073.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323193031|gb|EFZ78254.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196887|gb|EFZ82029.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323203872|gb|EFZ88889.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323214431|gb|EFZ99182.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323220129|gb|EGA04593.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226317|gb|EGA10529.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230246|gb|EGA14366.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233984|gb|EGA18073.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238322|gb|EGA22380.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244009|gb|EGA28018.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323246597|gb|EGA30571.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252160|gb|EGA36017.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323257792|gb|EGA41471.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261192|gb|EGA44784.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323264876|gb|EGA48375.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323272440|gb|EGA55847.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326622240|gb|EGE28585.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|366056321|gb|EHN20647.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366063705|gb|EHN27918.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366065263|gb|EHN29453.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366071306|gb|EHN35406.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366073947|gb|EHN38011.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366080211|gb|EHN44183.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366829565|gb|EHN56441.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372206453|gb|EHP19957.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|374354366|gb|AEZ46127.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|381297904|gb|EIC38988.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381299188|gb|EIC40262.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381301279|gb|EIC42335.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381304571|gb|EIC45546.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|381310809|gb|EIC51635.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|383797515|gb|AFH44597.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|392615966|gb|EIW98401.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392616299|gb|EIW98732.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392733386|gb|EIZ90588.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392734350|gb|EIZ91532.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392736650|gb|EIZ93812.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392747836|gb|EJA04827.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392750139|gb|EJA07115.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392754102|gb|EJA11021.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392763639|gb|EJA20446.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392763784|gb|EJA20590.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392764542|gb|EJA21341.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392769858|gb|EJA26587.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|392776968|gb|EJA33654.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392778952|gb|EJA35623.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392789424|gb|EJA45943.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392790828|gb|EJA47321.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392792039|gb|EJA48507.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392798762|gb|EJA55033.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392803142|gb|EJA59343.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392814678|gb|EJA70629.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392815126|gb|EJA71070.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392825524|gb|EJA81264.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392826279|gb|EJA82012.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392829863|gb|EJA85523.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392840308|gb|EJA95844.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|402515390|gb|EJW22804.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402515952|gb|EJW23365.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402525289|gb|EJW32579.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402531165|gb|EJW38378.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|444847423|gb|ELX72573.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444856380|gb|ELX81413.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
Length = 461
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/485 (45%), Positives = 296/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGED----MTAANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V LQ +A ++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PDVFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|288818363|ref|YP_003432711.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|384129119|ref|YP_005511732.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|288787763|dbj|BAI69510.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|308751956|gb|ADO45439.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
Length = 490
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/496 (43%), Positives = 296/496 (59%), Gaps = 22/496 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S K E P KV +Y CGVT YD SH+GH R + FDV RYL HLGY+V
Sbjct: 3 LKIYNTLSGKVEEFVPLNPPKVYIYTCGVTVYDDSHVGHGRSLIVFDVFRRYLEHLGYKV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRNFTDVDDKII RA E D ++++ RY ++ DM + P VEPRV++H+ I
Sbjct: 63 KFVRNFTDVDDKIINRAKEENTDFMTIANRYIASYYIDMESIKVKPADVEPRVTEHLQEI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
ID+I +++ G+AY GDVYFSV FPEYG+LS R E+ G RV +K++P DFA
Sbjct: 123 IDVIKGLVEKGYAYESGGDVYFSVKAFPEYGKLSKRSTEELEVGARVEPSEKKRDPLDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWKSAK GEP WESPWG GRPGWH EC AM +LG + DIHGGG+DLVFPHHENEIAQ+
Sbjct: 183 LWKSAKAGEPAWESPWGLGRPGWHTECVAMVFKHLGKTIDIHGGGLDLVFPHHENEIAQA 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A YW+HNG VT+ +KMSKSLGN+ T+R+V YHP LRL ++ THYRSP+
Sbjct: 243 EALTGKPFARYWMHNGLVTVGGQKMSKSLGNYVTLREVYRRYHPDVLRLLVLFTHYRSPL 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
++S ++E A I + D + L + ++++ + + F +S
Sbjct: 303 DFSWEKMEEAKRAYERIRHAIEDLD---MLKNLQVVEENKISQLYEKVKEAEEAFFEDLS 359
Query: 436 DDLHTTVVLAALSDPLKTINDL--LHTRKGKKQAMRLESLAALEKTIRNVLT----VLGL 489
+D +T +ALS + +L + +R ++ + + L+A E + ++L + GL
Sbjct: 360 EDFNTP---SALSHIFALVGELGKVKSRAISERRISRQDLSAYEFAVSSILRHMRGIFGL 416
Query: 490 MSTGYSEVLLQLREKALKRADLTEDQVL-QRIED-----RTVARKNKEYEKSDAIRKDLA 543
Y E + + + R +L QVL +R+ D R AR K ++ +D IR L
Sbjct: 417 FEDIYPEKPV----REVVRRELEAGQVLDERLIDILVDVRNQARAEKVFKIADYIRDRLK 472
Query: 544 AVGIALMDSPVGTTWR 559
VGI L D+P GT WR
Sbjct: 473 EVGIVLEDTPAGTKWR 488
>gi|261379506|ref|ZP_05984079.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
gi|284797969|gb|EFC53316.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
Length = 473
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/499 (43%), Positives = 290/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKVGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAHLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ E L + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPIEFL----QGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|238790851|ref|ZP_04634606.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
gi|238721068|gb|EEQ12753.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
Length = 473
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/492 (45%), Positives = 290/492 (58%), Gaps = 42/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 14 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 73
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EPR + H+P I
Sbjct: 74 TYVRNVTDVDDKIIKRAIENNETCEQLTSRMLAEMHKDFDALNLERPDLEPRATHHIPEI 133
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ AY +GDV F+VD P+YG LS + L+ +AG RV V K+NP DF
Sbjct: 134 IELTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 193
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 194 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 253
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 254 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 313
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA A T +F F A+M
Sbjct: 314 LNYSEENLKQARASLERLY-------TALRGTDANA--------TPAGGAEFEARFRAAM 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAA---LEKTIRNVLTVLGLMS 491
DD +T + L D + +N L + E +AA L +R + VLGL+
Sbjct: 359 DDDFNTPEAYSVLFDIAREVNRL-----------KTEDIAAANGLAAELRKLAHVLGLLE 407
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGI 547
Q E L+ T+D + +IE R AR +K++ +D+ R L +GI
Sbjct: 408 --------QDPELFLQSGAQTDDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGI 459
Query: 548 ALMDSPVGTTWR 559
L D P GTTWR
Sbjct: 460 VLEDGPQGTTWR 471
>gi|440288665|ref|YP_007341430.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium strain FGI
57]
gi|440048187|gb|AGB79245.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium strain FGI
57]
Length = 463
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/485 (45%), Positives = 295/485 (60%), Gaps = 26/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NTM+R++E KP G+VGMYVCG+T YD HIGH R +V+FDV+ RYLR LGY++
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDFCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE + L R E H+D L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVQLVDRMIVEMHKDFDALNILRPDAEPRATHHIHEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ ++++ G AY + GDV FSV P YG+LS + LE +AG RV V K+NP DF
Sbjct: 122 IEITERLIERGHAYVAESGDVMFSVPTDPNYGKLSRQDLEQLQAGARVEVAEVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LGH FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGHHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L + + D ++ + ++ + F +M
Sbjct: 302 LNYSEDNLKQARSALERLYTAL----RGTTTTDLEFVRSA----------QYVDRFKEAM 347
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T V A L D K +N+ KQA E A +R + VLGL+
Sbjct: 348 DDDFNTPVAYAVLFDLAKEVNN-------AKQAGNSEEANAAATCLRTLAAVLGLLEQD- 399
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A ++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 400 PEAFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 456
Query: 555 GTTWR 559
GTTWR
Sbjct: 457 GTTWR 461
>gi|238760398|ref|ZP_04621538.1| Cysteinyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
gi|238701403|gb|EEP93980.1| Cysteinyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
Length = 461
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/489 (45%), Positives = 288/489 (58%), Gaps = 36/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EP + H+P I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPHATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ AY D GDV FSV+ P+YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTERLIARNHAYVADNGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA A T +F F A+M
Sbjct: 302 LNYSEENLKQARASLERLY-------TALRGTDANA--------TPAGGAEFEARFRAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L + + + AL +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDIAREVNRL--------KTEDMTAANALAAELRKLAHVLGLLE--- 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGIALM 550
Q E L+ T+D + +IE R AR +K++ +D+ R L +GI L
Sbjct: 396 -----QDPELFLQSGAQTDDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLE 450
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 451 DGPQGTTWR 459
>gi|238762909|ref|ZP_04623877.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
gi|238698920|gb|EEP91669.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
Length = 461
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/489 (45%), Positives = 290/489 (59%), Gaps = 36/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EPR + H+P I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLKRPDLEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ AY +GDV FSV+ P+YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTERLIAREHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA A T +F F A+M
Sbjct: 302 LNYSEENLKQARASLERLY-------TALRGTDANA--------TPAGGAEFEARFRAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + AL +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDIAREVNRL--------KAEDMTAANALAAELRKLAHVLGLLE--- 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGIALM 550
Q E L+ T+D + +IE R AR +K++ +D+ R L +GI L
Sbjct: 396 -----QDPELFLQSGAQTDDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLE 450
Query: 551 DSPVGTTWR 559
D P GT WR
Sbjct: 451 DGPQGTIWR 459
>gi|255099211|ref|ZP_05328188.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-63q42]
gi|255304994|ref|ZP_05349166.1| cysteinyl-tRNA synthetase [Clostridium difficile ATCC 43255]
gi|400927240|ref|YP_001086515.2| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Clostridium difficile 630]
gi|347595718|sp|Q18CD5.2|SYC_CLOD6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|328887507|emb|CAJ66866.2| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Clostridium difficile 630]
Length = 465
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/483 (42%), Positives = 293/483 (60%), Gaps = 23/483 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R +E P EGKV MYVCG T Y+ HIG+AR ++ FD L RYL + GY+V Y
Sbjct: 3 VYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDVTY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII R++E G P ++ +Y +E+ D L +V P+V+D++ II+
Sbjct: 63 VQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQIIE 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++ D G+AY V+GDVYF +KF YG+LSG+K ED AG R+ V+ +K++P DF LW
Sbjct: 123 FIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFVLW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W+SPWG GRPGWHIECS MS YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 183 KAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+HNG++ I+ EKMSKS GNFFT+R + +LY +R F++ HYR+P+N+
Sbjct: 243 RSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPVNF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L A + +Y T E LS L + L + + V ++ F F+ +M DD
Sbjct: 303 SDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEK-EVELVKELDDFRQKFIDAMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
++T ++ + + K IN + SL +K + + G+++
Sbjct: 362 VNTADAVSVIFELAKLINSNVDENS---------SLEFAKKCLDEFNELTGVLNI----- 407
Query: 498 LLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K+ D D+ ++ I+ RT A+KNKE++ +D IR+ L +GI L D+ G
Sbjct: 408 -------VNKKKDTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTRQGV 460
Query: 557 TWR 559
W+
Sbjct: 461 KWK 463
>gi|390568854|ref|ZP_10249146.1| cysteinyl-tRNA ligase [Burkholderia terrae BS001]
gi|420252649|ref|ZP_14755752.1| cysteinyl-tRNA synthetase [Burkholderia sp. BT03]
gi|389939203|gb|EIN01040.1| cysteinyl-tRNA ligase [Burkholderia terrae BS001]
gi|398054156|gb|EJL46292.1| cysteinyl-tRNA synthetase [Burkholderia sp. BT03]
Length = 465
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/490 (44%), Positives = 292/490 (59%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R ++ P EG+V MYVCG+T YD H+GHARV V FD++ R+LR LGY+V
Sbjct: 4 LRIYNTLARDKQNFVPLHEGEVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGYKV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD++DKII RA E GE +L+ R+ H+D L P +EPR +D +P +
Sbjct: 64 TYVRNITDIEDKIIRRAVENGESIRALTDRFIAALHEDADALGIERPDLEPRATDFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++ NG+AY+ DGDV ++V KF YG LSG+ LED RAGERVA + K++P DF
Sbjct: 124 LGMIEKLEQNGYAYQAADGDVNYAVRKFANYGALSGKSLEDLRAGERVAANDAKQDPLDF 183
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK +K EP W+S +G GRPGWHIECSAM LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKQSKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNG+V ID+EKMSKSLGNFFTIR+V+ Y +R F+ HY
Sbjct: 244 IAQSEGATRQTFVNYWMHNGYVQIDNEKMSKSLGNFFTIREVLAKYDAEVVRFFIARAHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDF 430
RSP+NYS L+ A + +Y ALKD+ P N+ H F
Sbjct: 304 RSPLNYSDTHLDDARSALARLY---------------TALKDTPPGAGEIDWNEAHAQRF 348
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
A+M+DD +T V ++ L + +N TR AAL + + + VLGL+
Sbjct: 349 RAAMNDDFNTPVAVSVLFELASEVN---RTRD-----------AALARQLHGLARVLGLL 394
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
LQ + L + +I R A++ K+Y ++D IRK+L GIAL
Sbjct: 395 RR-EPRAYLQQAAGSESEGALDVAAIEVKIAARVAAKQAKDYAEADRIRKELLDAGIALE 453
Query: 551 DSPVG-TTWR 559
D P G T WR
Sbjct: 454 DKPGGLTEWR 463
>gi|296449821|ref|ZP_06891588.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
gi|296877885|ref|ZP_06901905.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
gi|296261308|gb|EFH08136.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
gi|296431082|gb|EFH16909.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
Length = 467
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/483 (42%), Positives = 293/483 (60%), Gaps = 23/483 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R +E P EGKV MYVCG T Y+ HIG+AR ++ FD L RYL + GY+V Y
Sbjct: 5 VYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDVTY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII R++E G P ++ +Y +E+ D L +V P+V+D++ II+
Sbjct: 65 VQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++ D G+AY V+GDVYF +KF YG+LSG+K ED AG R+ V+ +K++P DF LW
Sbjct: 125 FIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFVLW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W+SPWG GRPGWHIECS MS YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+HNG++ I+ EKMSKS GNFFT+R + +LY +R F++ HYR+P+N+
Sbjct: 245 RSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPVNF 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L A + +Y T E LS L + L + + V ++ F F+ +M DD
Sbjct: 305 SDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEK-EVELVKELDGFRQKFIDAMDDD 363
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
++T ++ + + K IN + SL +K + + G+++
Sbjct: 364 VNTADAVSVIFELAKLINSNVDENS---------SLEFAKKCLDEFNELTGVLNI----- 409
Query: 498 LLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K+ D D+ ++ I+ RT A+KNKE++ +D IR+ L +GI L D+ G
Sbjct: 410 -------VNKKKDTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTRQGV 462
Query: 557 TWR 559
W+
Sbjct: 463 KWK 465
>gi|417791399|ref|ZP_12438856.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii E899]
gi|449309141|ref|YP_007441497.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii SP291]
gi|333954515|gb|EGL72360.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii E899]
gi|449099174|gb|AGE87208.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii SP291]
Length = 461
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 293/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NTMSR++E KP G+VGMYVCG+T YDL HIGH R ++ FDV+ RYLR LGY++
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GED ++L R E H+D L+ L P EPR + H+P I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPDSEPRATQHIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ Q++ G AY +GDV F+V+ +YG+LS + LE +AG RV V K+NP DF
Sbjct: 122 IEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA+A T F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLY-------TALRGTDASA--------TAAGGEAFEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L +A + L +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KAEDSSAANQLAAHLRKLAAVLGLLEQAP 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L + E +++R+E ARK K++ +DA R L +GI L D P
Sbjct: 399 EQFLQSGAQANDDEVAEIEALIVKRLE----ARKAKDWAAADAARDRLNEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|333900431|ref|YP_004474304.1| cysteinyl-tRNA synthetase [Pseudomonas fulva 12-X]
gi|333115696|gb|AEF22210.1| cysteinyl-tRNA synthetase [Pseudomonas fulva 12-X]
Length = 461
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/487 (46%), Positives = 287/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E KP V MYVCG+T YD HIGHARV V FDV+ R+LRH GY+V
Sbjct: 3 LSIYNTLSKVKEPFKPLEGNSVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYDV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L R H+D L+ L P +EPR + H+ +
Sbjct: 63 TYVRNITDIDDKIIKRANENGEPFEALVERMIAAMHEDEGRLNVLRPDIEPRATGHIAGM 122
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS RK+++ + G R+ VD K++P DF
Sbjct: 123 HQMIQTLIDKGYAYAPGNGDVYYRVTKFETYGKLSRRKIDELKIGARIEVDEVKEDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 183 VLWKAAKPGEPSWESPWGKGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 243 SEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +A AA F F A+M
Sbjct: 303 INYSEESLREAKGALERFYNGLKGLPQAQPAGGAA----------------FVERFAAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD ++ A L + ++ IN L + LAA K + +L VL L +
Sbjct: 347 DDDFNSPEACAVLFEMIREINRLRES-----DLQAAAGLAAQLKALAGLLGVLQLEPDAF 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D E + L I R AR +K + +SD IR + A+G+ L D
Sbjct: 402 ------LKAGAEGKVDAAEVEAL--IAARLQARADKNWAESDRIRDQITALGVVLEDGKG 453
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 454 GTTWRLA 460
>gi|255654140|ref|ZP_05399549.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-23m63]
Length = 465
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/483 (42%), Positives = 293/483 (60%), Gaps = 23/483 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R +E P EGKV MYVCG T Y+ HIG+AR ++ FD L RYL + GY+V Y
Sbjct: 3 VYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDVTY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII R++E G P ++ +Y +E+ D L +V P+V+D++ II+
Sbjct: 63 VQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQIIE 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++ D G+AY V+GDVYF +KF YG+LSG+K ED AG R+ V+ +K++P DF LW
Sbjct: 123 FIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFVLW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W+SPWG GRPGWHIECS MS YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 183 KAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+HNG++ I+ EKMSKS GNFFT+R + +LY +R F++ HYR+P+N+
Sbjct: 243 RSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPVNF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L A + +Y T E LS L + L + + V ++ F F+ +M DD
Sbjct: 303 SDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEK-EVELVKELDGFRQKFIDAMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
++T ++ + + K IN + SL +K + + G+++
Sbjct: 362 VNTADAVSVIFELAKLINSNVDENS---------SLEFAKKCLDEFNELTGVLNI----- 407
Query: 498 LLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K+ D D+ ++ I+ RT A+KNKE++ +D IR+ L +GI L D+ G
Sbjct: 408 -------VNKKKDTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTRQGV 460
Query: 557 TWR 559
W+
Sbjct: 461 KWK 463
>gi|218703810|ref|YP_002411329.1| cysteinyl-tRNA synthetase [Escherichia coli UMN026]
gi|293403647|ref|ZP_06647738.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1412]
gi|298379257|ref|ZP_06989138.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1302]
gi|300897246|ref|ZP_07115688.1| cysteinyl-tRNA synthetase [Escherichia coli MS 198-1]
gi|419937015|ref|ZP_14453934.1| cysteinyl-tRNA synthetase [Escherichia coli 576-1]
gi|432352190|ref|ZP_19595498.1| cysteinyl-tRNA synthetase [Escherichia coli KTE2]
gi|432400638|ref|ZP_19643398.1| cysteinyl-tRNA synthetase [Escherichia coli KTE26]
gi|432429676|ref|ZP_19672135.1| cysteinyl-tRNA synthetase [Escherichia coli KTE181]
gi|432459496|ref|ZP_19701660.1| cysteinyl-tRNA synthetase [Escherichia coli KTE204]
gi|432474545|ref|ZP_19716558.1| cysteinyl-tRNA synthetase [Escherichia coli KTE208]
gi|432521162|ref|ZP_19758327.1| cysteinyl-tRNA synthetase [Escherichia coli KTE228]
gi|432541381|ref|ZP_19778255.1| cysteinyl-tRNA synthetase [Escherichia coli KTE235]
gi|432630097|ref|ZP_19866047.1| cysteinyl-tRNA synthetase [Escherichia coli KTE80]
gi|432639646|ref|ZP_19875491.1| cysteinyl-tRNA synthetase [Escherichia coli KTE83]
gi|432664713|ref|ZP_19900309.1| cysteinyl-tRNA synthetase [Escherichia coli KTE116]
gi|432791775|ref|ZP_20025869.1| cysteinyl-tRNA synthetase [Escherichia coli KTE78]
gi|432797742|ref|ZP_20031770.1| cysteinyl-tRNA synthetase [Escherichia coli KTE79]
gi|432884493|ref|ZP_20099449.1| cysteinyl-tRNA synthetase [Escherichia coli KTE158]
gi|432910211|ref|ZP_20117338.1| cysteinyl-tRNA synthetase [Escherichia coli KTE190]
gi|433017483|ref|ZP_20205753.1| cysteinyl-tRNA synthetase [Escherichia coli KTE105]
gi|433051826|ref|ZP_20239063.1| cysteinyl-tRNA synthetase [Escherichia coli KTE122]
gi|433066735|ref|ZP_20253578.1| cysteinyl-tRNA synthetase [Escherichia coli KTE128]
gi|433157470|ref|ZP_20342345.1| cysteinyl-tRNA synthetase [Escherichia coli KTE177]
gi|433176977|ref|ZP_20361441.1| cysteinyl-tRNA synthetase [Escherichia coli KTE82]
gi|226735058|sp|B7N980.1|SYC_ECOLU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218430907|emb|CAR11781.1| cysteinyl-tRNA synthetase [Escherichia coli UMN026]
gi|291429500|gb|EFF02520.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1412]
gi|298280370|gb|EFI21874.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1302]
gi|300358974|gb|EFJ74844.1| cysteinyl-tRNA synthetase [Escherichia coli MS 198-1]
gi|388398419|gb|EIL59325.1| cysteinyl-tRNA synthetase [Escherichia coli 576-1]
gi|430880589|gb|ELC03874.1| cysteinyl-tRNA synthetase [Escherichia coli KTE2]
gi|430929358|gb|ELC49869.1| cysteinyl-tRNA synthetase [Escherichia coli KTE26]
gi|430947342|gb|ELC67043.1| cysteinyl-tRNA synthetase [Escherichia coli KTE181]
gi|430992580|gb|ELD08951.1| cysteinyl-tRNA synthetase [Escherichia coli KTE204]
gi|431010485|gb|ELD24833.1| cysteinyl-tRNA synthetase [Escherichia coli KTE208]
gi|431045716|gb|ELD55946.1| cysteinyl-tRNA synthetase [Escherichia coli KTE228]
gi|431064099|gb|ELD73297.1| cysteinyl-tRNA synthetase [Escherichia coli KTE235]
gi|431174616|gb|ELE74661.1| cysteinyl-tRNA synthetase [Escherichia coli KTE80]
gi|431185221|gb|ELE84951.1| cysteinyl-tRNA synthetase [Escherichia coli KTE83]
gi|431204781|gb|ELF03339.1| cysteinyl-tRNA synthetase [Escherichia coli KTE116]
gi|431342571|gb|ELG29550.1| cysteinyl-tRNA synthetase [Escherichia coli KTE78]
gi|431345962|gb|ELG32876.1| cysteinyl-tRNA synthetase [Escherichia coli KTE79]
gi|431420081|gb|ELH02415.1| cysteinyl-tRNA synthetase [Escherichia coli KTE158]
gi|431447286|gb|ELH28028.1| cysteinyl-tRNA synthetase [Escherichia coli KTE190]
gi|431537058|gb|ELI13207.1| cysteinyl-tRNA synthetase [Escherichia coli KTE105]
gi|431575791|gb|ELI48517.1| cysteinyl-tRNA synthetase [Escherichia coli KTE122]
gi|431590975|gb|ELI61978.1| cysteinyl-tRNA synthetase [Escherichia coli KTE128]
gi|431681896|gb|ELJ47668.1| cysteinyl-tRNA synthetase [Escherichia coli KTE177]
gi|431710199|gb|ELJ74628.1| cysteinyl-tRNA synthetase [Escherichia coli KTE82]
Length = 461
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/485 (45%), Positives = 296/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWGPGRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGPGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + +VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSSVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|421896923|ref|ZP_16327318.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum MolK2]
gi|206588088|emb|CAQ18668.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum MolK2]
Length = 465
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/491 (45%), Positives = 296/491 (60%), Gaps = 34/491 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R+++ P G+V MYVCG+T YD H+GHARV V FD++ R+LR Y+V
Sbjct: 4 LKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASAYDV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R+ H+D L P EPR ++++P +
Sbjct: 64 TYVRNITDIDDKIIKRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYVPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++ NG AY+ DGDV ++V KFP YG+LSG+ LED RAGERVA + K++P DF
Sbjct: 124 LSMIGKLQANGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDAKQDPLDF 183
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWKSAK EP W SPWG GRPGWHIECSAMS LG FD+HGGG DL FPHHENE
Sbjct: 184 VLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQ+ A ++ ++ W+HNGFV ++ EKMSKSLGNFFTIR+V+++Y P +R F++ +HY
Sbjct: 244 IAQAEGANGSTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILRSHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RS +NYS L+ A + +Y L D A+ PD S + F
Sbjct: 304 RSDLNYSDAHLDDARHALTRLYTALKDVPAAV----------GAKPDWSESHGQ---RFR 350
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M+DD +T V +A L + +N K + A+ + LAAL V+GL+
Sbjct: 351 EAMNDDFNTPVAMAVLFELASEVN------KTRSPAL-VNQLAALG-------GVMGLLG 396
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
L A D E V RIE R VA+ +++ ++D IR DL A GI L D
Sbjct: 397 RDPHAFLQGGVGAAADGLDTVE--VEARIEARRVAKAARDFARADGIRADLLAAGIVLED 454
Query: 552 SPVGTT-WRPA 561
P G T WR A
Sbjct: 455 KPGGVTEWRRA 465
>gi|170025371|ref|YP_001721876.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
gi|229558805|sp|B1JHJ1.1|SYC_YERPY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169751905|gb|ACA69423.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
Length = 461
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/488 (45%), Positives = 291/488 (59%), Gaps = 34/488 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EPR + H+ I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+M +++ G AY +GDV F+VD P+YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L + ++ P V +F F +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTD-----------ANATPAGGV----EFEARFRTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L K + M + A E +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDIAREVNRL------KNEDMAAANGLAAE--LRKLAQVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
E+ LQ +A +D+V + I+ R AR +K++ +DA R L +GI L D
Sbjct: 398 PELFLQGGAQA------DDDEVAKIEALIKQRNDARSSKDWALADAARDQLNDLGIVLED 451
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 452 GPQGTTWR 459
>gi|237803609|ref|ZP_04591194.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331025591|gb|EGI05647.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 460
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/487 (44%), Positives = 283/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA + GE +L+ R + H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDTLTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKPYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L +P F F +M
Sbjct: 302 INYSEDSLRESKAALERFYHALR----------------GLPVAAPAGGEAFVERFSTAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L + ++ IN L + LAA K + +VL VL L + +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRES-----DVPAAAGLAARLKQLASVLGVLQLEADDF 400
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
LR A R D E + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 401 ------LRAGAEGRVDAAEVEAL--IQARLAARAAKDWAESDRIRDQITAMGVLLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|253681484|ref|ZP_04862281.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
gi|253561196|gb|EES90648.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
Length = 466
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/484 (41%), Positives = 295/484 (60%), Gaps = 25/484 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
L+NTM+R++E KP +G+V MYVCG T Y+ HIG+ R ++ FD + RY + GY+V +
Sbjct: 3 LFNTMTRQKEEFKPIKDGEVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYKGYKVNF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTD+DDK+I +ANE L R+ E+++D L+ +V PR ++ M II
Sbjct: 63 IQNFTDIDDKMIKKANEENVTVKELGDRFINEYYKDADGLNIKRATVNPRATEFMDEIIS 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ ++D G+AY VDGDVYFS KF EYG+LSG+ L+D +AG R+ VD RK++P DFA+W
Sbjct: 123 FVKDLIDKGYAYEVDGDVYFSTKKFAEYGKLSGQNLDDLQAGARITVDERKQDPMDFAIW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ K GEP WESPWG GRPGWHIECS M+ LG + DIH GG DLVFPHHENEIAQS A
Sbjct: 183 KNEKPGEPSWESPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+YW+H+ ++ I+++KMSKSL NFFT R+++E Y +RLF++ HYR+P+N+
Sbjct: 243 RNGKDFANYWMHSAYLNINNKKMSKSLNNFFTTREILERYDAEVIRLFMLSAHYRTPLNF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKD--SIPPDTVTSINKFHNDFLASMS 435
S LESA +Y ++ + E+ LLD +++ + + + +N + ++ M
Sbjct: 303 SDELLESAKASNERLYNSIGNLER---LLDEVKIEEMTGVEKEYIKVLNSYKEKYIEKMD 359
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T +A + D +K IN ++T K E + + IR + LG++
Sbjct: 360 DDFNTADAIAVIFDLIKEINTHVNTDSSK------ELVNYSLELIRELGMPLGILQKS-- 411
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
++ L ++ IE R ARK++++ +D IR DL A GI L D+ G
Sbjct: 412 -TIVDLNA-----------EIEGLIEQRQKARKDRDWALADKIRDDLKARGIVLEDTAQG 459
Query: 556 TTWR 559
W+
Sbjct: 460 VRWK 463
>gi|383191176|ref|YP_005201304.1| cysteinyl-tRNA synthetase [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371589434|gb|AEX53164.1| cysteinyl-tRNA synthetase [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 463
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/486 (45%), Positives = 293/486 (60%), Gaps = 28/486 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCG+T YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE ++L+ R E H D L+ LPP EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRAAENGETFMALTDRMIGEMHADFAALNILPPDSEPRATQHIHEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSR-KKNPAD 253
ID++ ++D AY +GDV F V+ P+YG LS + L+ +AG RV V++ K+NP D
Sbjct: 122 IDIVQTLIDRDHAYVASNGDVMFWVESDPDYGLLSRQDLDQLQAGARVEVEANVKRNPMD 181
Query: 254 FALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIA 313
F LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIA
Sbjct: 182 FVLWKMSKPGEPSWTSPWGKGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIA 241
Query: 314 QSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
QS A + +++ W+H+G V ID EKMSKSL NFFT+R V++ Y ++R FL+ HYRS
Sbjct: 242 QSSCAHDGPYVNTWMHSGMVMIDREKMSKSLDNFFTVRDVLKYYDAESVRYFLMSGHYRS 301
Query: 374 PINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
+NYS L+ A + +Y AL DAAA T F F A+
Sbjct: 302 QLNYSEENLKLARTSMERLY-------TALRGTDAAA--------TPAGGEAFVTRFRAA 346
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T + L D + IN L + L + L +R + VLGL+
Sbjct: 347 MDDDFNTPEAYSVLFDMARDINRL--------KTEDLSAANGLAAELRQLAGVLGLLEQD 398
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L+ +A ++ E + L I+ R AR +K++ +D R L +GI L D P
Sbjct: 399 -PEQFLKSGAQADNDDEVAEIEAL--IKQRNDARASKDWGMADKARDRLNEMGIVLEDGP 455
Query: 554 VGTTWR 559
GTTWR
Sbjct: 456 AGTTWR 461
>gi|70731271|ref|YP_261012.1| cysteinyl-tRNA synthetase [Pseudomonas protegens Pf-5]
gi|109894922|sp|Q4K9S1.1|SYC_PSEF5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|68345570|gb|AAY93176.1| cysteine--tRNA ligase [Pseudomonas protegens Pf-5]
Length = 460
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/487 (43%), Positives = 285/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLITRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H+D L+ P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRANENGEAFEALTERMIAAMHEDEARLNIKKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HTMIQTLIDKGYAYAPGNGDVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDESKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W SPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWPSPWGDGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V++ YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLVASHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPKVAPAGGEAFVERFTQVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L + ++ IN L + +++ A L ++ + +VLG++
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRES--------DIDAAAGLAARLKELASVLGVLQLEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L E + A QV I+ R AR NK++ +SD IR + A+G+ L D
Sbjct: 398 DDFLQAGAEGRVDGA-----QVEALIQARLAARANKDWAESDRIRDQITAMGVILEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|433476514|ref|ZP_20433845.1| cysteine--tRNA ligase [Neisseria meningitidis 88050]
gi|433516605|ref|ZP_20473363.1| cysteine--tRNA ligase [Neisseria meningitidis 2004090]
gi|433518715|ref|ZP_20475449.1| cysteine--tRNA ligase [Neisseria meningitidis 96023]
gi|433524927|ref|ZP_20481579.1| cysteine--tRNA ligase [Neisseria meningitidis 97020]
gi|433529189|ref|ZP_20485794.1| cysteine--tRNA ligase [Neisseria meningitidis NM3652]
gi|433531364|ref|ZP_20487941.1| cysteine--tRNA ligase [Neisseria meningitidis NM3642]
gi|433533398|ref|ZP_20489954.1| cysteine--tRNA ligase [Neisseria meningitidis 2007056]
gi|433535558|ref|ZP_20492083.1| cysteine--tRNA ligase [Neisseria meningitidis 2001212]
gi|432207372|gb|ELK63362.1| cysteine--tRNA ligase [Neisseria meningitidis 88050]
gi|432250791|gb|ELL06171.1| cysteine--tRNA ligase [Neisseria meningitidis 2004090]
gi|432250876|gb|ELL06253.1| cysteine--tRNA ligase [Neisseria meningitidis 96023]
gi|432257429|gb|ELL12729.1| cysteine--tRNA ligase [Neisseria meningitidis 97020]
gi|432263543|gb|ELL18760.1| cysteine--tRNA ligase [Neisseria meningitidis NM3652]
gi|432263814|gb|ELL19025.1| cysteine--tRNA ligase [Neisseria meningitidis NM3642]
gi|432264712|gb|ELL19911.1| cysteine--tRNA ligase [Neisseria meningitidis 2007056]
gi|432269148|gb|ELL24311.1| cysteine--tRNA ligase [Neisseria meningitidis 2001212]
Length = 473
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 293/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D +P +
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA----------DPMPSE-- 351
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ + + F +M+DD T +A L + +N + A RL++L
Sbjct: 352 -AGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVN----KTNDAQLAGRLKALGG----- 401
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
++GL+ E L + L+ +++ I R AR +K + +SD IR
Sbjct: 402 -----IIGLLQRDPIEFL----QGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|417548036|ref|ZP_12199117.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
gi|417566287|ref|ZP_12217161.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|395558043|gb|EJG24044.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|400388335|gb|EJP51407.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
Length = 477
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/489 (41%), Positives = 298/489 (60%), Gaps = 19/489 (3%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
+ L++YN +R +E +P V ++ +YVCG+T YD HIGHAR + FD++ R+LR G+
Sbjct: 2 SDLYVYNAETRSKEHFEPIVANEIKLYVCGITVYDYCHIGHARTMIAFDLIVRFLRSQGW 61
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
+V Y+RN TD+DDKII +A + E L+ R+ + H+D L CL P EP+ +D +
Sbjct: 62 KVKYIRNITDIDDKIIHKAQDNHESIGELTDRFIQAMHEDFQTLGCLSPDAEPKATDSIQ 121
Query: 194 HIIDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAG--ERVAVDSRKKN 250
I +I +++ +AY++ +GD+YFS++ +P+YG+LSGRKL D +AG +RV++++ K +
Sbjct: 122 DIQRIIQTLIEKKYAYQIANGDIYFSIESYPDYGRLSGRKLADMQAGASQRVSLETEKHH 181
Query: 251 PADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHEN 310
P DF LWK++K EPFW+SPWG GRPGWHIECSAMS +LG+ FDIHGGG DL+FPHHEN
Sbjct: 182 PFDFVLWKASKPNEPFWQSPWGNGRPGWHIECSAMSMCHLGNHFDIHGGGGDLIFPHHEN 241
Query: 311 EIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTH 370
EIAQS AA +++YW+H GF+ ++ EKMSKSLGNF TIR + YHP +RL ++ +H
Sbjct: 242 EIAQSEAATGEKYVNYWLHTGFINVNGEKMSKSLGNFLTIRDAFKSYHPEVIRLLMMSSH 301
Query: 371 YRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDF 430
YRSPI++S L+ + + YQ ++ + ++ D A T + N F F
Sbjct: 302 YRSPIDFSDHILKDTQKVLSRFYQAIYHAQPFIASKDDAI-------KTELNSNPFIQKF 354
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
+M+DD +T L D LK +N L +K + L I N+L +
Sbjct: 355 NQAMNDDFNTPEALVICFDLLKQLNIALKEESPEKVIKNYQLLL----WIGNILNIF--- 407
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
Y + + + + L+E ++ + I R AR NK+Y +D IR+ L GI L
Sbjct: 408 --QYDPEKILKHSASEQDSPLSEQEIQEAILARNTARSNKQYALADQIRQKLLQSGILLE 465
Query: 551 DSPVGTTWR 559
D+ T WR
Sbjct: 466 DTQTQTIWR 474
>gi|339998481|ref|YP_004729364.1| cysteinyl-tRNA synthetase [Salmonella bongori NCTC 12419]
gi|339511842|emb|CCC29553.1| cysteinyl-tRNA synthetase [Salmonella bongori NCTC 12419]
Length = 461
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/485 (45%), Positives = 296/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 INITQTLIEKGHAYVADNGDVMFDVPTDPAYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGED----MTAANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|283834167|ref|ZP_06353908.1| cysteine--tRNA ligase [Citrobacter youngae ATCC 29220]
gi|291070317|gb|EFE08426.1| cysteine--tRNA ligase [Citrobacter youngae ATCC 29220]
Length = 461
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/485 (45%), Positives = 296/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V+FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHSDFDALNILRPDLEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YGQLS + L+ +AG RV V K+NP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+++ A F F+ +M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L KG+ A + + +R + +VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL----KGEDMA----AANGMASHLRKLSSVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A ++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|421843582|ref|ZP_16276742.1| cysteinyl-tRNA synthetase [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|411775303|gb|EKS58749.1| cysteinyl-tRNA synthetase [Citrobacter freundii ATCC 8090 = MTCC
1658]
Length = 461
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/485 (45%), Positives = 296/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V+FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHSDFDALNILRPDLEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YGQLS + L+ +AG RV V K+NP DF
Sbjct: 122 IEITEQLMAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+++ A F F+ +M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L KG+ A + + +R + +VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL----KGEDMA----AANGMAAHLRKLSSVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A ++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|437834270|ref|ZP_20844942.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435301340|gb|ELO77373.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
Length = 461
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/485 (45%), Positives = 296/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YGQLS + LE +AG RV + K+NP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDIVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGED----MTAANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V LQ +A ++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PDVFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|296313701|ref|ZP_06863642.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
gi|296839719|gb|EFH23657.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
Length = 475
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/499 (43%), Positives = 292/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 6 IYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 66 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDANALGVLRPDIEPKATENIPQMIA 125
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ N AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 126 MIETLIQNSKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 185
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS LG +FDIHGGG DL FPHHENEIAQS
Sbjct: 186 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLLGDTFDIHGGGADLQFPHHENEIAQSV 245
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y P
Sbjct: 246 GASGHSCGHNHAQTHYGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 305
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + AAA D
Sbjct: 306 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTP-------AAAF------DLS 352
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 353 ENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAHLAGCL 398
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ E L + L+ +++ I R AR +K + +SD IR
Sbjct: 399 KALGGIIGLLQRDPIEFL----QGGAVSDGLSNEEIDDLIARRKQARADKNWVESDRIRD 454
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 455 LLNEHKIILEDNAGGTTWR 473
>gi|332800102|ref|YP_004461601.1| cysteinyl-tRNA synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|332697837|gb|AEE92294.1| cysteinyl-tRNA synthetase [Tepidanaerobacter acetatoxydans Re1]
Length = 466
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/487 (40%), Positives = 296/487 (60%), Gaps = 26/487 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
+ +YNT++RK+E P + V MY CG T YD HIG+ARV++TFD++ YL+ GY+V
Sbjct: 1 MLIYNTLTRKKEEFVPLEDNHVKMYTCGPTVYDFFHIGNARVFITFDMVRNYLKFRGYDV 60
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTD+DDK+I RAN+ G L R+ E+ D L V PR ++H+ I
Sbjct: 61 TFVQNFTDIDDKMIKRANDEGITVKELGERFIGEYFHDADTLGITRADVHPRATEHIDEI 120
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
ID+I +++ G+AY V+GDVY+ +F +YG+LS + +++ +AG R+ +KK+P DFA
Sbjct: 121 IDLIKILVEKGYAYEVNGDVYYKTSRFKDYGKLSHQNIDELKAGARIEPGEQKKDPIDFA 180
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+ K GEP W+SPWG GRPGWHIECS M+ YLG + DIHGGG DL+FPHHENEIAQS
Sbjct: 181 LWKAQKPGEPAWDSPWGKGRPGWHIECSVMAMKYLGETIDIHGGGPDLIFPHHENEIAQS 240
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA +++H G++ I+++KMSKSLGNFFT+R +++ Y P LR F++ +HYR+PI
Sbjct: 241 EAATGKPFARFFMHVGYLNINNQKMSKSLGNFFTVRDILKTYDPEVLRFFMLSSHYRNPI 300
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH---NDFLA 432
N+S +E A + + LH+ ++ L++ A + D +NK N+F+
Sbjct: 301 NFSQDLMEQAKNSL----ERLHNAIYSMEHLESVAQDKDLAEDDEKYLNKLETNKNEFIK 356
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T +A+L + ++ N + KK + + I + +VLGL
Sbjct: 357 AMDDDFNTADAIASLFNIVREYNMFVDENSPKKL------IVDTKDAILTLGSVLGLFRK 410
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ LL ++++ Q+I +R ARK K Y +D IR DL A GI L D+
Sbjct: 411 FMEKTLL-------------DEEIEQKIIEREQARKEKNYALADKIRDDLKAQGIILEDT 457
Query: 553 PVGTTWR 559
P G W+
Sbjct: 458 PAGVRWK 464
>gi|422640394|ref|ZP_16703821.1| cysteinyl-tRNA synthetase [Pseudomonas syringae Cit 7]
gi|330952785|gb|EGH53045.1| cysteinyl-tRNA synthetase [Pseudomonas syringae Cit 7]
Length = 460
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 289/489 (59%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIGAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L K L L + A + F F A+M
Sbjct: 302 INYSEDSLRESKAALERFYHAL----KGLPLAEPAGGE------------AFVERFSAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL L +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVAAAAGLAARLKQLAS-------VLGVLQLEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ LR A R + E + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 399 DF------LRAGAEGRVNAAEVEAL--IQARLAARAAKDWAESDRIRDQITAMGVLLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|145589043|ref|YP_001155640.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|187629841|sp|A4SX62.1|SYC_POLSQ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145047449|gb|ABP34076.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 473
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/499 (43%), Positives = 294/499 (58%), Gaps = 40/499 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+SR +++ KP V GKV MYVCG+T YD HIGHARV + FD++ R+LR GYEV
Sbjct: 2 LQIYNTLSRSKQVFKPIVPGKVKMYVCGMTVYDFCHIGHARVMIVFDMVVRWLRASGYEV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E +L+ R+ H D +L + P EPR +D++ +
Sbjct: 62 QYVRNITDIDDKIIKRALENSEPISALTNRFIAAMHADSDELGLMHPDQEPRATDYIQQM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++++N AY+ DGDV F+V P YGQLSG+ L++ AGERVA+ K++P DF
Sbjct: 122 QGMIGKLIENELAYQGEDGDVNFAVRLLPRYGQLSGKTLDELNAGERVAIGGGKRDPLDF 181
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWKSAK EP W SPWG GRPGWHIECSAMS LG FDIHGGG DL FPHHENE
Sbjct: 182 VLWKSAKPEEPADTRWNSPWGEGRPGWHIECSAMSCDLLGAHFDIHGGGADLQFPHHENE 241
Query: 312 IAQSCAACNNSH--------ISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALR 363
IAQS A + ++YW+HNG + ++ EKMSKSLGNFF IR V++ + P +R
Sbjct: 242 IAQSEGALYGQNRQENDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVLKSFDPEVVR 301
Query: 364 LFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSI 423
F++ HYRSPINYS QLE A + +Y L + D++P D
Sbjct: 302 FFMLKAHYRSPINYSDAQLEEARSGLTRLYTALTHIPEV----------DTVPIDLQ--- 348
Query: 424 NKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNV 483
N + F +M+DD +T +A L D +N + Q + LA L K++
Sbjct: 349 NPWAKRFADAMNDDFNTPEAIAVLFDLASEVN--------RAQGAEKQMLAGLLKSLGGT 400
Query: 484 LTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLA 543
L L T + L+ + ++ L+ +Q+ + I R A++ K++ K+D IRK L
Sbjct: 401 LNFLQRDPTNF------LQAGSKDQSGLSSEQIEEHIAARVAAKQAKDFAKADGIRKALL 454
Query: 544 AVGIALMDSPVGTT-WRPA 561
G+ L D P G T WR A
Sbjct: 455 EQGVVLEDKPGGITEWRRA 473
>gi|422617423|ref|ZP_16686126.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
M301072]
gi|330897806|gb|EGH29225.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
M301072]
Length = 460
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/489 (45%), Positives = 289/489 (59%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R + H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L K L + + A + F F +M
Sbjct: 302 INYSEDSLRESKAALERFYHAL----KGLPVAEPAGGE------------AFVERFSTAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL L +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDIAAAAGLAARLKQLAS-------VLGVLQLEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ LR A R D E + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 399 DF------LRAGAEGRVDAAEVEAL--IQARLAARAAKDWAESDRIRDQITAMGVLLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|261868784|ref|YP_003256706.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|415770039|ref|ZP_11484654.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|416108703|ref|ZP_11591198.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|444346355|ref|ZP_21154322.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|261414116|gb|ACX83487.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|348004228|gb|EGY44753.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|348657072|gb|EGY74669.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|443541696|gb|ELT52102.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 469
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/490 (45%), Positives = 291/490 (59%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NT++R++E+ KP GK+GMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E ++D L+ L P EPR + H+P I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID++ +++ G AY D GDV F V+ F +YG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 132 IDIVQKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H+G + +D EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +K+ D+ F +M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGTDKSAVAFGGENFVDA---------------FREAM 356
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T L+ L + + +N L K A RL LAA +LG
Sbjct: 357 DDDFNTPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAA----------ILG---- 402
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LLQL + +A ED+V + I+ R +R K++ +DA R L +GI L
Sbjct: 403 -----LLQLDPEQFLQAGSDEDEVAKIEALIKQRNESRATKDWAAADAARNALTEMGIIL 457
Query: 550 MDSPVGTTWR 559
D P GTTWR
Sbjct: 458 EDGPNGTTWR 467
>gi|429216070|ref|ZP_19207229.1| cysteinyl-tRNA synthetase [Pseudomonas sp. M1]
gi|428153723|gb|EKX00277.1| cysteinyl-tRNA synthetase [Pseudomonas sp. M1]
Length = 461
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/487 (45%), Positives = 288/487 (59%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E +P V +V MYVCG+T YD HIGHARV V FDV+ R+LR GYE+
Sbjct: 3 LSVYNTLSKAKEPFQPLVGNQVRMYVCGMTVYDFCHIGHARVMVAFDVIARWLRQRGYEL 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R H+D L L P +EPR + H+ +
Sbjct: 63 TYVRNITDIDDKIIRRAQENGEPFDALTERMIAAMHEDEARLSVLRPDIEPRATGHIAGM 122
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D GFAY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 123 HAMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DLVFPHHENEIAQ
Sbjct: 183 VLWKAAKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G V +D EKMSKSLGNFFTIR+V+E YHP +R L+ +HYRSP
Sbjct: 243 SEAATGKPYAATWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRFLLVSSHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F A+M
Sbjct: 303 INYSEDNLKEAKGALERFYTALR----------------GLPEVEAAGGEAFAERFAAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L + + +N L + +LAA + + +L VL L +
Sbjct: 347 DDDFNTPEAVAVLFEMAREVNRLR-----EADLQAAAALAAKLRELAGLLGVLQLEPDAF 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L+ A + D + + L I+ R AR K + +SD IR +L A+G+ L D
Sbjct: 402 ------LQAGAAGKVDAAQVEAL--IQARLEARAAKNWAESDRIRDELTAMGVVLEDGKG 453
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 454 GTTWRLA 460
>gi|302390937|ref|YP_003826757.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
gi|302203014|gb|ADL11692.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
Length = 481
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/492 (42%), Positives = 304/492 (61%), Gaps = 23/492 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++K+E +P + +V +Y CG T YD HIG+AR ++ D+L RYL + GY V
Sbjct: 3 LQIYNTLTQKKEEFEPLDQDEVKLYSCGPTVYDYFHIGNARAFILPDILKRYLEYKGYNV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V NFTDVDDK+I RANE + L+ R+ + +D L+ V P+ ++H+ I
Sbjct: 63 LHVTNFTDVDDKMIKRANEEEIEIEELADRFITAYFEDTERLNIKQADVYPKATEHISDI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I+++ ++ D G+AY VDGDV+F+V KF +YG+LS ++LE+ +G RV V+ +K++P DF
Sbjct: 123 IELVKKLEDKGYAYEVDGDVFFAVRKFADYGKLSNQELEELTSGSRVEVNDKKEDPLDFV 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK +KEGEP WESPWG GRPGWHIECSAMS YLG FD H GG+DLVFPHHENEIAQ+
Sbjct: 183 LWKKSKEGEPSWESPWGTGRPGWHIECSAMSMCYLGEEFDFHTGGVDLVFPHHENEIAQN 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A + ++YW+HNG++ +D EKMSKSLGNFFT R +++ Y LR FLI HYRSPI
Sbjct: 243 EAGVGSQVVNYWLHNGYINVDGEKMSKSLGNFFTTRDILQDYSAEVLRFFLISKHYRSPI 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV---TSINKFHNDFLA 432
N+S +L++A++ + + T++ + L D A LK + I F
Sbjct: 303 NFSDAELDNAAKSLQRLQNTVNKLKDLLD-RDRADLKPGNKEELQELEKKIKAKREKFEE 361
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DDL+T + + AL + K +N +++ A E N++ + T
Sbjct: 362 AMDDDLNTALAIGALHELAKELNIVVND-------------ADFELNQANIIVLEKAYDT 408
Query: 493 GYSEVLLQLREKALKRAD-----LTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGI 547
+ E+ Q+ L+ D LT D + +E R AR+N+++E +D IR +L+ +GI
Sbjct: 409 -FKELSQQVLGINLETEDDISDNLTSDLIGLLLEVRNKARQNQDWELADQIRDELSELGI 467
Query: 548 ALMDSPVGTTWR 559
L D+P GT W+
Sbjct: 468 ILEDTPQGTDWK 479
>gi|335424982|ref|ZP_08553974.1| cysteinyl-tRNA synthetase [Salinisphaera shabanensis E1L3A]
gi|334886972|gb|EGM25316.1| cysteinyl-tRNA synthetase [Salinisphaera shabanensis E1L3A]
Length = 462
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/484 (44%), Positives = 288/484 (59%), Gaps = 29/484 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
L++++S +R+ +K V +YVCGVT YD H+GHARV + FD+ RYLR +G+ V Y
Sbjct: 4 LHDSLSGQRQPLKTLEPDHVRLYVCGVTAYDYCHLGHARVMIVFDMFVRYLRAIGWRVTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE P ++S R+ E +D L PS EP + H+ II
Sbjct: 64 VRNVTDIDDKIINRANETGETPEAISTRFTEAMREDEAALGLKAPSAEPTATGHVDQIIA 123
Query: 198 MITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++++NG AY D GDVY+ V F YG LSGR+L D RAGER+AV+ K +P DF L
Sbjct: 124 MIERLIENGAAYASDNGDVYYDVSTFDNYGALSGRRLADLRAGERIAVNEAKTDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK EP W+SPWG GRPGWHIECSAMS LG SFDIHGGG+DL FPHHENEIAQS
Sbjct: 184 WKAAKPDEPSWDSPWGQGRPGWHIECSAMSTHCLGASFDIHGGGLDLQFPHHENEIAQSE 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
AA +++ W+HNGFVT+D EKMSKSLGNF TIR V+ Y ++R F++ THYRSP+
Sbjct: 244 AATGQRYVTTWMHNGFVTVDDEKMSKSLGNFLTIRDVLAKYDAESVRYFVLSTHYRSPLA 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVT-SINKFHNDFLASMS 435
Y+V +++A+ + +Y AL+D P D + + + + F +M+
Sbjct: 304 YNVDAMDAATSALSRLY---------------TALRDVAPNDAQSEAADAYEARFTDAMA 348
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DDL+T +A L + D ++ QA + +GL+
Sbjct: 349 DDLNTPAAIAVL---FEMARDCQRLKQDDCQAAGAIAARLALLA-----GRIGLLEQS-P 399
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
+V LQ L+ D + +++R AR K + ++D IR L A I L D P G
Sbjct: 400 QVFLQ---GHAGEEGLSADTIEAMLQERRDARAAKNFARADEIRDALTAQNIVLEDGPDG 456
Query: 556 TTWR 559
T WR
Sbjct: 457 TLWR 460
>gi|108808560|ref|YP_652476.1| cysteinyl-tRNA synthetase [Yersinia pestis Antiqua]
gi|108811182|ref|YP_646949.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|145599972|ref|YP_001164048.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides F]
gi|149365066|ref|ZP_01887101.1| cysteinyl-tRNA synthetase [Yersinia pestis CA88-4125]
gi|153947472|ref|YP_001401974.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
gi|162421370|ref|YP_001605813.1| cysteinyl-tRNA synthetase [Yersinia pestis Angola]
gi|165927660|ref|ZP_02223492.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|166011255|ref|ZP_02232153.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166214354|ref|ZP_02240389.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398585|ref|ZP_02304109.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422736|ref|ZP_02314489.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423331|ref|ZP_02315084.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|218930118|ref|YP_002347993.1| cysteinyl-tRNA synthetase [Yersinia pestis CO92]
gi|229838673|ref|ZP_04458832.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229896170|ref|ZP_04511340.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides A]
gi|229899240|ref|ZP_04514383.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229901410|ref|ZP_04516532.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|270489600|ref|ZP_06206674.1| cysteine--tRNA ligase [Yersinia pestis KIM D27]
gi|294504817|ref|YP_003568879.1| cysteinyl-tRNA synthetase [Yersinia pestis Z176003]
gi|384123284|ref|YP_005505904.1| cysteinyl-tRNA synthetase [Yersinia pestis D106004]
gi|384127139|ref|YP_005509753.1| cysteinyl-tRNA synthetase [Yersinia pestis D182038]
gi|384139080|ref|YP_005521782.1| cysteinyl-tRNA synthetase [Yersinia pestis A1122]
gi|420548145|ref|ZP_15045976.1| cysteine--tRNA ligase [Yersinia pestis PY-01]
gi|420553460|ref|ZP_15050726.1| cysteine--tRNA ligase [Yersinia pestis PY-02]
gi|420559037|ref|ZP_15055595.1| cysteine--tRNA ligase [Yersinia pestis PY-03]
gi|420564461|ref|ZP_15060440.1| cysteine--tRNA ligase [Yersinia pestis PY-04]
gi|420569501|ref|ZP_15065018.1| cysteine--tRNA ligase [Yersinia pestis PY-05]
gi|420575167|ref|ZP_15070142.1| cysteine--tRNA ligase [Yersinia pestis PY-06]
gi|420580485|ref|ZP_15074976.1| cysteine--tRNA ligase [Yersinia pestis PY-07]
gi|420585834|ref|ZP_15079824.1| cysteine--tRNA ligase [Yersinia pestis PY-08]
gi|420590946|ref|ZP_15084421.1| cysteine--tRNA ligase [Yersinia pestis PY-09]
gi|420596334|ref|ZP_15089269.1| cysteine--tRNA ligase [Yersinia pestis PY-10]
gi|420601996|ref|ZP_15094308.1| cysteine--tRNA ligase [Yersinia pestis PY-11]
gi|420607428|ref|ZP_15099212.1| cysteine--tRNA ligase [Yersinia pestis PY-12]
gi|420612817|ref|ZP_15104048.1| cysteine--tRNA ligase [Yersinia pestis PY-13]
gi|420618197|ref|ZP_15108746.1| cysteine--tRNA ligase [Yersinia pestis PY-14]
gi|420623493|ref|ZP_15113510.1| cysteine--tRNA ligase [Yersinia pestis PY-15]
gi|420628572|ref|ZP_15118118.1| cysteine--tRNA ligase [Yersinia pestis PY-16]
gi|420633693|ref|ZP_15122712.1| cysteine--tRNA ligase [Yersinia pestis PY-19]
gi|420638899|ref|ZP_15127398.1| cysteine--tRNA ligase [Yersinia pestis PY-25]
gi|420644384|ref|ZP_15132392.1| cysteine--tRNA ligase [Yersinia pestis PY-29]
gi|420649655|ref|ZP_15137163.1| cysteine--tRNA ligase [Yersinia pestis PY-32]
gi|420655294|ref|ZP_15142232.1| cysteine--tRNA ligase [Yersinia pestis PY-34]
gi|420660785|ref|ZP_15147156.1| cysteine--tRNA ligase [Yersinia pestis PY-36]
gi|420666090|ref|ZP_15151921.1| cysteine--tRNA ligase [Yersinia pestis PY-42]
gi|420670966|ref|ZP_15156357.1| cysteine--tRNA ligase [Yersinia pestis PY-45]
gi|420676308|ref|ZP_15161217.1| cysteine--tRNA ligase [Yersinia pestis PY-46]
gi|420681923|ref|ZP_15166294.1| cysteine--tRNA ligase [Yersinia pestis PY-47]
gi|420687244|ref|ZP_15171028.1| cysteine--tRNA ligase [Yersinia pestis PY-48]
gi|420692464|ref|ZP_15175609.1| cysteine--tRNA ligase [Yersinia pestis PY-52]
gi|420698237|ref|ZP_15180687.1| cysteine--tRNA ligase [Yersinia pestis PY-53]
gi|420704036|ref|ZP_15185317.1| cysteine--tRNA ligase [Yersinia pestis PY-54]
gi|420709438|ref|ZP_15190082.1| cysteine--tRNA ligase [Yersinia pestis PY-55]
gi|420714890|ref|ZP_15194936.1| cysteine--tRNA ligase [Yersinia pestis PY-56]
gi|420720394|ref|ZP_15199666.1| cysteine--tRNA ligase [Yersinia pestis PY-58]
gi|420725871|ref|ZP_15204476.1| cysteine--tRNA ligase [Yersinia pestis PY-59]
gi|420731467|ref|ZP_15209496.1| cysteine--tRNA ligase [Yersinia pestis PY-60]
gi|420736490|ref|ZP_15214034.1| cysteine--tRNA ligase [Yersinia pestis PY-61]
gi|420741963|ref|ZP_15218954.1| cysteine--tRNA ligase [Yersinia pestis PY-63]
gi|420747666|ref|ZP_15223787.1| cysteine--tRNA ligase [Yersinia pestis PY-64]
gi|420753121|ref|ZP_15228643.1| cysteine--tRNA ligase [Yersinia pestis PY-65]
gi|420758860|ref|ZP_15233290.1| cysteine--tRNA ligase [Yersinia pestis PY-66]
gi|420764162|ref|ZP_15237915.1| cysteine--tRNA ligase [Yersinia pestis PY-71]
gi|420769390|ref|ZP_15242606.1| cysteine--tRNA ligase [Yersinia pestis PY-72]
gi|420774374|ref|ZP_15247118.1| cysteine--tRNA ligase [Yersinia pestis PY-76]
gi|420779986|ref|ZP_15252059.1| cysteine--tRNA ligase [Yersinia pestis PY-88]
gi|420785573|ref|ZP_15256951.1| cysteine--tRNA ligase [Yersinia pestis PY-89]
gi|420790732|ref|ZP_15261580.1| cysteine--tRNA ligase [Yersinia pestis PY-90]
gi|420796262|ref|ZP_15266544.1| cysteine--tRNA ligase [Yersinia pestis PY-91]
gi|420801311|ref|ZP_15271084.1| cysteine--tRNA ligase [Yersinia pestis PY-92]
gi|420806674|ref|ZP_15275938.1| cysteine--tRNA ligase [Yersinia pestis PY-93]
gi|420812024|ref|ZP_15280749.1| cysteine--tRNA ligase [Yersinia pestis PY-94]
gi|420817545|ref|ZP_15285730.1| cysteine--tRNA ligase [Yersinia pestis PY-95]
gi|420822854|ref|ZP_15290497.1| cysteine--tRNA ligase [Yersinia pestis PY-96]
gi|420827943|ref|ZP_15295069.1| cysteine--tRNA ligase [Yersinia pestis PY-98]
gi|420833622|ref|ZP_15300202.1| cysteine--tRNA ligase [Yersinia pestis PY-99]
gi|420838498|ref|ZP_15304604.1| cysteine--tRNA ligase [Yersinia pestis PY-100]
gi|420843684|ref|ZP_15309311.1| cysteine--tRNA ligase [Yersinia pestis PY-101]
gi|420849347|ref|ZP_15314399.1| cysteine--tRNA ligase [Yersinia pestis PY-102]
gi|420854999|ref|ZP_15319197.1| cysteine--tRNA ligase [Yersinia pestis PY-103]
gi|420860203|ref|ZP_15323771.1| cysteine--tRNA ligase [Yersinia pestis PY-113]
gi|421764579|ref|ZP_16201368.1| cysteinyl-tRNA ligase [Yersinia pestis INS]
gi|21264007|sp|Q8ZCC0.1|SYC_YERPE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123073499|sp|Q1CKY1.1|SYC_YERPN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123372235|sp|Q1C4U1.1|SYC_YERPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187470969|sp|A7FL46.1|SYC_YERP3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187470970|sp|A4TP63.1|SYC_YERPP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558804|sp|A9R253.1|SYC_YERPG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|108774830|gb|ABG17349.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|108780473|gb|ABG14531.1| cysteinyl-tRNA synthetase [Yersinia pestis Antiqua]
gi|115348729|emb|CAL21675.1| cysteinyl-tRNA synthetase [Yersinia pestis CO92]
gi|145211668|gb|ABP41075.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides F]
gi|149291479|gb|EDM41553.1| cysteinyl-tRNA synthetase [Yersinia pestis CA88-4125]
gi|152958967|gb|ABS46428.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
gi|162354185|gb|ABX88133.1| cysteinyl-tRNA synthetase [Yersinia pestis Angola]
gi|165920414|gb|EDR37691.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989933|gb|EDR42234.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204483|gb|EDR48963.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958327|gb|EDR55348.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051089|gb|EDR62497.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057501|gb|EDR67247.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229681339|gb|EEO77433.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|229687642|gb|EEO79715.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695039|gb|EEO85086.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229701093|gb|EEO89122.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides A]
gi|262362880|gb|ACY59601.1| cysteinyl-tRNA synthetase [Yersinia pestis D106004]
gi|262366803|gb|ACY63360.1| cysteinyl-tRNA synthetase [Yersinia pestis D182038]
gi|270338104|gb|EFA48881.1| cysteine--tRNA ligase [Yersinia pestis KIM D27]
gi|294355276|gb|ADE65617.1| cysteinyl-tRNA synthetase [Yersinia pestis Z176003]
gi|342854209|gb|AEL72762.1| cysteinyl-tRNA synthetase [Yersinia pestis A1122]
gi|391423674|gb|EIQ86138.1| cysteine--tRNA ligase [Yersinia pestis PY-01]
gi|391424374|gb|EIQ86753.1| cysteine--tRNA ligase [Yersinia pestis PY-02]
gi|391424729|gb|EIQ87076.1| cysteine--tRNA ligase [Yersinia pestis PY-03]
gi|391438705|gb|EIQ99426.1| cysteine--tRNA ligase [Yersinia pestis PY-04]
gi|391439857|gb|EIR00474.1| cysteine--tRNA ligase [Yersinia pestis PY-05]
gi|391443572|gb|EIR03875.1| cysteine--tRNA ligase [Yersinia pestis PY-06]
gi|391455549|gb|EIR14656.1| cysteine--tRNA ligase [Yersinia pestis PY-07]
gi|391456444|gb|EIR15468.1| cysteine--tRNA ligase [Yersinia pestis PY-08]
gi|391458487|gb|EIR17345.1| cysteine--tRNA ligase [Yersinia pestis PY-09]
gi|391471519|gb|EIR29074.1| cysteine--tRNA ligase [Yersinia pestis PY-10]
gi|391472873|gb|EIR30293.1| cysteine--tRNA ligase [Yersinia pestis PY-11]
gi|391473719|gb|EIR31069.1| cysteine--tRNA ligase [Yersinia pestis PY-12]
gi|391487453|gb|EIR43379.1| cysteine--tRNA ligase [Yersinia pestis PY-13]
gi|391489029|gb|EIR44814.1| cysteine--tRNA ligase [Yersinia pestis PY-15]
gi|391489638|gb|EIR45367.1| cysteine--tRNA ligase [Yersinia pestis PY-14]
gi|391503544|gb|EIR57731.1| cysteine--tRNA ligase [Yersinia pestis PY-16]
gi|391503810|gb|EIR57967.1| cysteine--tRNA ligase [Yersinia pestis PY-19]
gi|391508889|gb|EIR62571.1| cysteine--tRNA ligase [Yersinia pestis PY-25]
gi|391519328|gb|EIR71970.1| cysteine--tRNA ligase [Yersinia pestis PY-29]
gi|391521221|gb|EIR73707.1| cysteine--tRNA ligase [Yersinia pestis PY-34]
gi|391522153|gb|EIR74563.1| cysteine--tRNA ligase [Yersinia pestis PY-32]
gi|391534333|gb|EIR85521.1| cysteine--tRNA ligase [Yersinia pestis PY-36]
gi|391537088|gb|EIR88010.1| cysteine--tRNA ligase [Yersinia pestis PY-42]
gi|391539374|gb|EIR90102.1| cysteine--tRNA ligase [Yersinia pestis PY-45]
gi|391552393|gb|EIS01819.1| cysteine--tRNA ligase [Yersinia pestis PY-46]
gi|391552769|gb|EIS02164.1| cysteine--tRNA ligase [Yersinia pestis PY-47]
gi|391553371|gb|EIS02701.1| cysteine--tRNA ligase [Yersinia pestis PY-48]
gi|391567328|gb|EIS15201.1| cysteine--tRNA ligase [Yersinia pestis PY-52]
gi|391568468|gb|EIS16184.1| cysteine--tRNA ligase [Yersinia pestis PY-53]
gi|391573381|gb|EIS20451.1| cysteine--tRNA ligase [Yersinia pestis PY-54]
gi|391581635|gb|EIS27496.1| cysteine--tRNA ligase [Yersinia pestis PY-55]
gi|391584036|gb|EIS29622.1| cysteine--tRNA ligase [Yersinia pestis PY-56]
gi|391594270|gb|EIS38438.1| cysteine--tRNA ligase [Yersinia pestis PY-58]
gi|391597353|gb|EIS41185.1| cysteine--tRNA ligase [Yersinia pestis PY-60]
gi|391598656|gb|EIS42350.1| cysteine--tRNA ligase [Yersinia pestis PY-59]
gi|391611769|gb|EIS53912.1| cysteine--tRNA ligase [Yersinia pestis PY-61]
gi|391612314|gb|EIS54398.1| cysteine--tRNA ligase [Yersinia pestis PY-63]
gi|391615548|gb|EIS57299.1| cysteine--tRNA ligase [Yersinia pestis PY-64]
gi|391624825|gb|EIS65408.1| cysteine--tRNA ligase [Yersinia pestis PY-65]
gi|391630058|gb|EIS69884.1| cysteine--tRNA ligase [Yersinia pestis PY-66]
gi|391635620|gb|EIS74755.1| cysteine--tRNA ligase [Yersinia pestis PY-71]
gi|391637683|gb|EIS76572.1| cysteine--tRNA ligase [Yersinia pestis PY-72]
gi|391647632|gb|EIS85241.1| cysteine--tRNA ligase [Yersinia pestis PY-76]
gi|391651309|gb|EIS88497.1| cysteine--tRNA ligase [Yersinia pestis PY-88]
gi|391656004|gb|EIS92682.1| cysteine--tRNA ligase [Yersinia pestis PY-89]
gi|391660617|gb|EIS96746.1| cysteine--tRNA ligase [Yersinia pestis PY-90]
gi|391668146|gb|EIT03408.1| cysteine--tRNA ligase [Yersinia pestis PY-91]
gi|391677645|gb|EIT11934.1| cysteine--tRNA ligase [Yersinia pestis PY-93]
gi|391678488|gb|EIT12696.1| cysteine--tRNA ligase [Yersinia pestis PY-92]
gi|391679224|gb|EIT13376.1| cysteine--tRNA ligase [Yersinia pestis PY-94]
gi|391691554|gb|EIT24472.1| cysteine--tRNA ligase [Yersinia pestis PY-95]
gi|391694557|gb|EIT27202.1| cysteine--tRNA ligase [Yersinia pestis PY-96]
gi|391696240|gb|EIT28745.1| cysteine--tRNA ligase [Yersinia pestis PY-98]
gi|391708199|gb|EIT39474.1| cysteine--tRNA ligase [Yersinia pestis PY-99]
gi|391711820|gb|EIT42751.1| cysteine--tRNA ligase [Yersinia pestis PY-100]
gi|391712687|gb|EIT43541.1| cysteine--tRNA ligase [Yersinia pestis PY-101]
gi|391724443|gb|EIT54019.1| cysteine--tRNA ligase [Yersinia pestis PY-102]
gi|391725375|gb|EIT54847.1| cysteine--tRNA ligase [Yersinia pestis PY-103]
gi|391727841|gb|EIT57009.1| cysteine--tRNA ligase [Yersinia pestis PY-113]
gi|411174690|gb|EKS44721.1| cysteinyl-tRNA ligase [Yersinia pestis INS]
Length = 461
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 290/488 (59%), Gaps = 34/488 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EPR + H+ I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+M +++ G AY +GDV F+VD P+YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA A T +F F +M
Sbjct: 302 LNYSEENLKQARASLERLY-------TALRGTDANA--------TPAGGAEFEARFRTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L K + M + A E +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDIAREVNRL------KNEDMAAANGLAAE--LRKLAQVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
E+ LQ +A +D+V + I+ R AR +K + +DA R L +GI L D
Sbjct: 398 PELFLQGGAQA------DDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLED 451
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 452 GPQGTTWR 459
>gi|336316096|ref|ZP_08570998.1| cysteinyl-tRNA synthetase [Rheinheimera sp. A13L]
gi|335879586|gb|EGM77483.1| cysteinyl-tRNA synthetase [Rheinheimera sp. A13L]
Length = 459
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/485 (46%), Positives = 289/485 (59%), Gaps = 30/485 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++RK+E P V GKV MYVCG+T YD H+GHAR YV FDV+ RYLR GY+V
Sbjct: 2 LQIFNTLTRKKESFVPLVPGKVSMYVCGITIYDFCHVGHARTYVAFDVMNRYLRFSGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RANE GE +L+ RY H D L +P +EPRV+ HM I
Sbjct: 62 TYVRNITDVDDKIIKRANENGESCDALTARYTVAMHDDFKALGLMPADIEPRVTTHMAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++I ++ G+AY DGDV F V K+ YGQLS + L+ ++G RV +D K +P DF
Sbjct: 122 IELIETLVAKGYAYIASDGDVLFDVSKYEAYGQLSQQNLDMLQSGARVEIDQAKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK EP W SPWG GRPGWHIECSAMSA +LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMAKPNEPSWSSPWGEGRPGWHIECSAMSAKHLGKHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ WIH G V +D EKMSKSLGNFFT++ V+ Y+ A+R FLI +HYRS
Sbjct: 242 SCCAHDTPYVNTWIHTGMVQVDKEKMSKSLGNFFTVKDVLADYNAEAVRYFLISSHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y AL++ P V N + F A+M
Sbjct: 302 LNYSAENLLQAHSALGRLY---------------TALREVKPAADVDMNNDYVKTFSAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L L + + IN K++A + L + + +V+G++ G
Sbjct: 347 DDDFNTALALPVLFELARDIN--------KEKATDPAKASQLAGLLIKLGSVMGILQ-GD 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+E LQ D+ E + L I R AR NK++ +DA R L A GI L D
Sbjct: 398 AETFLQ---SGTDSDDVAEIEAL--IAQRNTARANKDWAAADAARDALVAKGIILEDKAG 452
Query: 555 GTTWR 559
TTWR
Sbjct: 453 ITTWR 457
>gi|123443257|ref|YP_001007231.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|187470968|sp|A1JNP9.1|SYC_YERE8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|122090218|emb|CAL13084.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 461
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 288/489 (58%), Gaps = 36/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EPR + H+P I
Sbjct: 62 TYVRNVTDVDDKIIKRALENNETCEQLTTRMLVEMHKDFDALNLKRPDLEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I + +++ AY +GDV FSV+ P+YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IALTERLIARNHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA A T +F F A+M
Sbjct: 302 LNYSEENLKQARASLERLY-------TALRGTDANA--------TPAGGAEFEARFRAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L + + + AL +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDIAREVNRL--------KTEDITAANALAAELRKLAYVLGLLE--- 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGIALM 550
Q E L+ T+D + +IE R AR +K++ +D+ R L +GI L
Sbjct: 396 -----QDPELFLQSGAQTDDDEVAKIEVLIKQRNDARSSKDWALADSARDQLNELGIVLE 450
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 451 DGPQGTTWR 459
>gi|22125011|ref|NP_668434.1| cysteinyl-tRNA synthetase [Yersinia pestis KIM10+]
gi|45440695|ref|NP_992234.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
91001]
gi|21957858|gb|AAM84685.1|AE013714_1 cysteine tRNA synthetase [Yersinia pestis KIM10+]
gi|45435553|gb|AAS61111.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
91001]
Length = 476
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 290/488 (59%), Gaps = 34/488 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 17 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 76
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EPR + H+ I
Sbjct: 77 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 136
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+M +++ G AY +GDV F+VD P+YG LS + L+ +AG RV V K+NP DF
Sbjct: 137 IEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 196
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 197 VLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 256
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 257 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 316
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA A T +F F +M
Sbjct: 317 LNYSEENLKQARASLERLY-------TALRGTDANA--------TPAGGAEFEARFRTAM 361
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L K + M + A E +R + VLGL+
Sbjct: 362 DDDFNTPEAYSVLFDIAREVNRL------KNEDMAAANGLAAE--LRKLAQVLGLLEQD- 412
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
E+ LQ +A +D+V + I+ R AR +K + +DA R L +GI L D
Sbjct: 413 PELFLQGGAQA------DDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLED 466
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 467 GPQGTTWR 474
>gi|322833979|ref|YP_004214006.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
gi|384259159|ref|YP_005403093.1| cysteinyl-tRNA synthetase [Rahnella aquatilis HX2]
gi|321169180|gb|ADW74879.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
gi|380755135|gb|AFE59526.1| cysteinyl-tRNA synthetase [Rahnella aquatilis HX2]
Length = 463
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/486 (45%), Positives = 293/486 (60%), Gaps = 28/486 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCG+T YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE ++L+ R E H D L+ LPP EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRAAENGETFMALTDRMIAEMHADFASLNILPPDSEPRATQHIHEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSR-KKNPAD 253
ID++ +++D AY +GDV F V+ P+YG LS + L+ +AG RV V++ K+NP D
Sbjct: 122 IDIVQKLIDRDHAYVASNGDVMFWVESDPDYGLLSRQDLDQLQAGARVEVEANVKRNPMD 181
Query: 254 FALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIA 313
F LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIA
Sbjct: 182 FVLWKMSKPGEPSWTSPWGEGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIA 241
Query: 314 QSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
QS A + +++ W+H+G V ID EKMSKSL NFFT+R V++ Y ++R FL+ HYRS
Sbjct: 242 QSSCAHDGPYVNTWMHSGMVMIDREKMSKSLDNFFTVRDVLKYYDAESVRYFLMSGHYRS 301
Query: 374 PINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
+NYS L+ A + +Y AL DAAA T F F A+
Sbjct: 302 QLNYSEENLKLARTSMERLY-------TALRGTDAAA--------TPAGGEAFVTRFRAA 346
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T + L D + IN L + L + L +R + VLGL+
Sbjct: 347 MDDDFNTPEAYSVLFDMARDINRL--------KTEDLSAANGLAAELRQLAGVLGLLEQD 398
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E L+ +A ++ E + L I+ R AR +K++ +D R L +GI L D
Sbjct: 399 -PEQFLKSGAQADNDDEVAEIEAL--IKQRNDARASKDWGMADKARDRLNEMGIVLEDGA 455
Query: 554 VGTTWR 559
GTTWR
Sbjct: 456 AGTTWR 461
>gi|148657145|ref|YP_001277350.1| cysteinyl-tRNA synthetase [Roseiflexus sp. RS-1]
gi|148569255|gb|ABQ91400.1| cysteinyl-tRNA synthetase [Roseiflexus sp. RS-1]
Length = 478
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 292/493 (59%), Gaps = 33/493 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R E + G V MYVCGVT YD +HIGHA + FDV+ RYL + GY V +
Sbjct: 5 IYNTLTRTLEPFETLEPGVVKMYVCGVTVYDRAHIGHAMSAIVFDVVRRYLEYRGYAVQH 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDKII RA E+G DP L+ Y EF +D+ L+ + PR ++ MP I
Sbjct: 65 VVNFTDVDDKIINRAREIGRDPKELAESYIAEFLEDLEALNVKRAHIYPRATETMPEIQQ 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
IT++++ G AY VDGDVYF + P+YG+LS R L+D AG R++VD RK+NPADFALW
Sbjct: 125 FITRLIETGHAYVVDGDVYFRIATVPDYGKLSRRSLDDMIAGNRISVDERKENPADFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AK GEPFW+SPWGPGRPGWHIECSAM+ A+LG DIHGGG DL+FPHHENEIAQ+ +
Sbjct: 185 KAAKPGEPFWDSPWGPGRPGWHIECSAMNLAHLGEQIDIHGGGADLIFPHHENEIAQTES 244
Query: 318 ACNNSHISYWIHNGFVTIDS---------EKMSKSLGNFFTIRQVMELYHPLALRLFLIG 368
YW+HNG + I + EKMSKSLGN TIR+ + YHP LRL ++
Sbjct: 245 LTGKPFARYWMHNGMLQIQTRLADGTYKLEKMSKSLGNVVTIREFLAQYHPDVLRLTVLS 304
Query: 369 THYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHN 428
+ YRSP+ + E A+++ + + E + ++A D + T+ +
Sbjct: 305 SSYRSPLAFGE---EIAADQERKLVRLRSALEPPIGTIEAGLAVDVLLAAARTTRER--- 358
Query: 429 DFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLG 488
F+A+M DD +T LAAL D ++ IN + + A + T R + VLG
Sbjct: 359 -FIAAMDDDFNTAGALAALFDLVRAIN------TARDAGVGGAPFAEAQATFRELTDVLG 411
Query: 489 LMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIA 548
L T ++ Q A DL IE R+ RK K++ +D +R LA +GI
Sbjct: 412 LTLTPQQPIIQQ----AAPFIDLL-------IEVRSELRKAKQFALADMVRNRLADLGIT 460
Query: 549 LMDSPVGTTWRPA 561
L D+P GT W+ A
Sbjct: 461 LEDTPQGTRWKAA 473
>gi|171320751|ref|ZP_02909762.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
gi|171094016|gb|EDT39118.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
Length = 465
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/489 (45%), Positives = 299/489 (61%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R +++ P+ G+V MYVCG+T YD H+GHAR+ V FD++ R+LR +GY V
Sbjct: 4 LRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYRV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+ R+ H+D L P +EPR + +P +
Sbjct: 64 TYVRNITDIDDKIIRRALENGETIKSLTDRFIGAMHEDEAALGIQRPDIEPRATQFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI + NG+AY+ DGDV +SV KF YG+LSG+ L+D RAGERVA + K++P DF
Sbjct: 124 LGMIETLETNGYAYQAGDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLDF 183
Query: 255 ALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AK +P W S +G GRPGWHIECSAM LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKRAKADDPQGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGFV +D+EKMSKSLGNFFTIR+V+E Y +R F++ THY
Sbjct: 244 IAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRFFIVRTHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RSP+NYS V L+ A + +Y L D E DA AL + P F
Sbjct: 304 RSPLNYSDVHLDDARASLTRLYTALKDVEP-----DALALDWNEP---------HAQRFA 349
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A+M+DD++T V +A L + +N TR A+L + ++ + +LGL+
Sbjct: 350 AAMNDDINTPVAVATLFELAGEVN---RTRD-----------ASLARQLKQLAGLLGLLG 395
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LQ A + L D++ +I R A++ K+Y ++D IR +L GIAL D
Sbjct: 396 R-EPRAFLQQGTGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALED 454
Query: 552 SPVGTT-WR 559
P G+T WR
Sbjct: 455 KPGGSTEWR 463
>gi|420257596|ref|ZP_14760352.1| cysteinyl-tRNA ligase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404515001|gb|EKA28780.1| cysteinyl-tRNA ligase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 461
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 288/489 (58%), Gaps = 36/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EPR + H+P I
Sbjct: 62 TYVRNVTDVDDKIIKRALENNETCEQLTTRMLVEMHKDFDALNLKRPDLEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I + +++ AY +GDV FSV+ P+YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IALTERLIARNHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA A T +F F A+M
Sbjct: 302 LNYSEENLKQARASLERLY-------TALRGTDANA--------TPAGGAEFEARFRAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L + + + AL +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDIAREVNRL--------KTEDITAANALAAELRKLAHVLGLLE--- 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGIALM 550
Q E L+ T+D + +IE R AR +K++ +D+ R L +GI L
Sbjct: 396 -----QDPELFLQSGAQTDDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLE 450
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 451 DGPQGTTWR 459
>gi|157146856|ref|YP_001454175.1| cysteinyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
gi|157084061|gb|ABV13739.1| hypothetical protein CKO_02631 [Citrobacter koseri ATCC BAA-895]
Length = 461
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/485 (45%), Positives = 293/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYTL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDLEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YGQLS + LE +AG RV V K NP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLEQLQAGARVDVVDVKHNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKTVAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L ++ + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KSEDMAAANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +L E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDGELAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|51595384|ref|YP_069575.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
gi|186894407|ref|YP_001871519.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
gi|61216168|sp|Q66DK9.1|SYC_YERPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558803|sp|B2K7N2.1|SYC_YERPB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|51588666|emb|CAH20275.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
gi|186697433|gb|ACC88062.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
Length = 461
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 290/488 (59%), Gaps = 34/488 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EPR + H+ I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+M +++ G AY +GDV F+VD P+YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA A T +F F +M
Sbjct: 302 LNYSEENLKQARASLERLY-------TALRGTDANA--------TPAGGAEFEARFRTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L K + M + A E +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDIAREVNRL------KNEDMAAANGLAAE--LRKLAQVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
E+ LQ +A +D+V + I+ R AR +K + +DA R L +GI L D
Sbjct: 398 PELFLQGGAQA------DDDEVAKIEALIKQRNDARSSKNWALADAARDQLNDLGIVLED 451
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 452 GPQGTTWR 459
>gi|389841851|ref|YP_006343935.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii ES15]
gi|387852327|gb|AFK00425.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii ES15]
Length = 461
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 293/489 (59%), Gaps = 36/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NTMSR++E KP G+VGMYVCG+T YDL HIGH R ++ FDV+ RYLR LGY++
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GED ++L R E H+D L+ L P EPR + H+P I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPDSEPRATQHIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ Q++ G AY +GDV F+V+ +YG+LS + LE +AG RV V K+NP DF
Sbjct: 122 IEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA+A T F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLY-------TALRGTDASA--------TAAGGEAFEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L +A + L +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KAEDSSAANQLAAHLRKLAAVLGLLE--- 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGIALM 550
Q E+ L+ D + IE R ARK K++ +DA R L +GI L
Sbjct: 396 -----QEPEQFLQSGAQANDDEVAEIEALIVKRLEARKAKDWAAADAARDRLNEMGIILE 450
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 451 DGPQGTTWR 459
>gi|283784327|ref|YP_003364192.1| cysteinyl-tRNA synthetase [Citrobacter rodentium ICC168]
gi|282947781|emb|CBG87337.1| cysteinyl-tRNA synthetase [Citrobacter rodentium ICC168]
Length = 461
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/485 (45%), Positives = 293/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YGQLS + L+ +AG RV V K+NP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPSYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKTVAPAGGEA---------------FEARFIDAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L K + M + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL------KNEDM--AAANAMASHLRKISAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A D Q+ I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA---DDGEVAQIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|237730496|ref|ZP_04560977.1| cysteinyl-tRNA synthetase [Citrobacter sp. 30_2]
gi|365105048|ref|ZP_09334440.1| cysteinyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
gi|395231060|ref|ZP_10409357.1| cysteinyl-tRNA synthetase [Citrobacter sp. A1]
gi|424731036|ref|ZP_18159624.1| cysteinyl-trna synthetase [Citrobacter sp. L17]
gi|226906035|gb|EEH91953.1| cysteinyl-tRNA synthetase [Citrobacter sp. 30_2]
gi|363643989|gb|EHL83293.1| cysteinyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
gi|394715181|gb|EJF21015.1| cysteinyl-tRNA synthetase [Citrobacter sp. A1]
gi|422894446|gb|EKU34258.1| cysteinyl-trna synthetase [Citrobacter sp. L17]
gi|455641712|gb|EMF20883.1| cysteinyl-tRNA synthetase [Citrobacter freundii GTC 09479]
Length = 461
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/485 (45%), Positives = 296/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V+FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHSDFDALNILRPDLEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YGQLS + L+ +AG RV V K+NP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+++ A F F+ +M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L KG+ A + + +R + +VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL----KGEDMA----AANGMAAHLRKLSSVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A ++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|238795438|ref|ZP_04638953.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
gi|238720557|gb|EEQ12358.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
Length = 461
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/488 (45%), Positives = 289/488 (59%), Gaps = 34/488 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EPR + H+P I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENSETCEQLTTRMLAEMHKDFDALNLQRPDLEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+M +++ AY +GDV F+VD P+YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IEMTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W+SPWGPGRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGPGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA A T +F F A+M
Sbjct: 302 LNYSEENLKQARASLERLY-------TALRGTDANA--------TPKGGAEFEARFRAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L + + + L +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDIAREVNRL--------KTEDITAANGLAAELRKLAHVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
E+ LQ A D+V + I+ R AR +K++ +D+ R L +GI L D
Sbjct: 398 PELFLQ------SGAQTDNDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED 451
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 452 GPQGTTWR 459
>gi|422645826|ref|ZP_16708961.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959375|gb|EGH59635.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 460
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/489 (45%), Positives = 290/489 (59%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA + GE +L+ R + H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L K L + + A + F F A+M
Sbjct: 302 INYSEDSLRESKAALERFYHAL----KGLPVAEPAGGE------------AFVERFSAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL L +
Sbjct: 346 NDDFGTPEACAVLFEMVRDINRLRESDVAAAAGLAARLKQLAS-------VLGVLQLEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ LR A R D E + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 399 DF------LRAGAEGRVDAAEVEAL--IQARLAARAAKDWAESDRIRDQITAMGVLLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|345429845|ref|YP_004822963.1| cysteinyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
gi|301155906|emb|CBW15375.1| cysteinyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
Length = 459
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/488 (46%), Positives = 298/488 (61%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP EGKVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + L+ +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLDQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +++ A AL F F +M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQS-----AVALGGE----------NFVEAFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + IN L + A + LAA +R + +LGL
Sbjct: 347 DDDFNTPNALSVLFEMAREINKL-----KTEDAEKANGLAA---RLRELAGILGL----- 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
L Q EK L+ A +D+V + I+ R AR K++ +DA R +L A+GI L D
Sbjct: 394 ---LQQDPEKFLQ-AGSDDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPNGTTWR 457
>gi|295096713|emb|CBK85803.1| cysteinyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 465
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/488 (45%), Positives = 295/488 (60%), Gaps = 28/488 (5%)
Query: 73 STQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLG 132
S+ L ++NTM+R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LG
Sbjct: 3 SSMLKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLG 62
Query: 133 YEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHM 192
Y + YVRN TD+DDKII RANE GE ++L R E H+D L+ L P EPR + H+
Sbjct: 63 YNLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHI 122
Query: 193 PHIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNP 251
IID+ ++++ G AY D GDV FSV P YG LS + L+ +AG RV V K+NP
Sbjct: 123 HEIIDITQKLIERGHAYVADNGDVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRNP 182
Query: 252 ADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
DF LWK +K GEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENE
Sbjct: 183 MDFVLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENE 242
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HY
Sbjct: 243 IAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHY 302
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RS +NYS L+ A + +Y L +K++ A F F+
Sbjct: 303 RSQLNYSEENLKQARAALERLYTALRGTDKSVPAAGGEA---------------FEARFV 347
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
M+DD +T + L D + +N L ++ + + AL +R + +VLGL+
Sbjct: 348 EVMNDDFNTPEAYSVLFDMAREVNRL--------KSEDMAAANALASHLRKLSSVLGLLE 399
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
++ LQ +A ++ E + L I+ R AR+ K++ +DA R L +GI L D
Sbjct: 400 Q-EPDLFLQSGAQA-DDGEVAEIEAL--IKARLEARQAKDWAAADAARNRLTEMGIILED 455
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 456 GPQGTTWR 463
>gi|332982044|ref|YP_004463485.1| cysteinyl-tRNA synthetase [Mahella australiensis 50-1 BON]
gi|332699722|gb|AEE96663.1| cysteinyl-tRNA synthetase [Mahella australiensis 50-1 BON]
Length = 467
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/482 (41%), Positives = 290/482 (60%), Gaps = 20/482 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++RK+E+ +P + V MYVCG T YD HIG+AR V FD L RYL + GY+V Y
Sbjct: 4 LYNTLTRKQEIFEPLNDNTVTMYVCGPTVYDYFHIGNARPLVVFDTLRRYLEYRGYKVKY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDK+I RAN+ G L R+ +E+ D L+ P V PR ++H+ +I+
Sbjct: 64 VQNFTDIDDKMIKRANQEGITVKELGDRFIQEYFVDAKGLNIRPADVHPRATEHITDMIE 123
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I +++D G AY VDG+VYF KFP+YG+LS + + AG RV V+ K+NP DF LW
Sbjct: 124 FIKKLIDKGVAYVVDGNVYFDTSKFPQYGKLSHQDFNEIEAGARVEVNESKRNPMDFVLW 183
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ K GEP W+SPWG GRPGWH+ECS MS YLG + DIHGGG DL+FPHHENEIAQS +
Sbjct: 184 KAQKPGEPAWDSPWGMGRPGWHMECSVMSMKYLGDTIDIHGGGQDLIFPHHENEIAQSES 243
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+W+HNG++ +D +KMSKSLGNFFT+R + + Y +R+F++ +HYRSPIN+
Sbjct: 244 LTGKPLARFWLHNGYINVDGQKMSKSLGNFFTVRDISKEYDLETVRIFMLLSHYRSPINF 303
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S LE A + +Y E + D +A+ + + + ++ F+ +M DD
Sbjct: 304 SHQLLEQAKNALARLYNVKFRLEDIKNSSDISAVSEQ-ERAFINDMPRYRQKFIEAMDDD 362
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
++T + + D K +N L+ E + ++ + V+GL+
Sbjct: 363 MNTASAMGVIFDLAKDVNILM------ADGASAEFASEASDMLKELTGVMGLL------- 409
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
++ A + D +++ Q I+ R AR N+++ +D IR +L A+GI L D+P G
Sbjct: 410 ---YKDSACSQLD---NEIEQMIQKRQQARANRDWATADRIRDELKAMGIVLEDTPQGVR 463
Query: 558 WR 559
W+
Sbjct: 464 WK 465
>gi|359780008|ref|ZP_09283235.1| cysteinyl-tRNA synthetase [Pseudomonas psychrotolerans L19]
gi|359372624|gb|EHK73188.1| cysteinyl-tRNA synthetase [Pseudomonas psychrotolerans L19]
Length = 461
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/487 (44%), Positives = 279/487 (57%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT+++ +E P V G+V MYVCG+T YD H+GH R V FDV+ R+LRH GY++
Sbjct: 3 LHLYNTLTKTKEAFTPLVPGQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHSGYDL 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RAN GE L R E H+D L+ P EPR +DH+ +
Sbjct: 63 TYVRNITDIDDKIINRANANGEPFTDLVARMIEAMHEDEARLNIRKPDQEPRATDHIDGM 122
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V++F YG+LS R++ED R G R+ K++P DF
Sbjct: 123 HAMIQTLIDKGYAYAAGNGDVYYRVNRFAGYGKLSRRRVEDLRIGARIEPGEAKEDPLDF 182
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W SPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 183 VLWKAAKPGEPSWPSPWGEGRPGWHIECSVMSTCCLGETFDIHGGGNDLEFPHHENEIAQ 242
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G +TI+ EKMSKSLGNFFT+R+V+E YHP +R LI +HYRSP
Sbjct: 243 SEAATGKTYANAWLHCGMITINGEKMSKSLGNFFTLREVLEKYHPEVVRYLLIASHYRSP 302
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y +L +P + F M
Sbjct: 303 INYSEDNLREAKGALERFYHSL----------------KGLPQAPAKGGEGYAERFAQCM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L + + IN L R+ A + E + VL VL L +
Sbjct: 347 DDDFNTAGACGVLFELAREINRL---RESDPAAAAGLAGRLRE--LGEVLGVLQLEPEAF 401
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
LR A R D E + L I+ R AR K + +SD IR L A+G+ L D
Sbjct: 402 ------LRADAAGRVDAAEVEAL--IQARLAARAEKNWAESDRIRDQLTALGVVLEDGKG 453
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 454 GTTWRLA 460
>gi|429330373|ref|ZP_19211165.1| cysteinyl-tRNA synthetase [Pseudomonas putida CSV86]
gi|428764903|gb|EKX87026.1| cysteinyl-tRNA synthetase [Pseudomonas putida CSV86]
Length = 460
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/487 (45%), Positives = 288/487 (59%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR+ GY++
Sbjct: 2 LTIYNTLSKTKEVFKPLEGNKVRMYVCGMTVYDFCHLGHGRSMVAFDLVTRWLRYSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R + H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTARMIDAMHEDERRLNILKPDLEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWGPGRPGWHIECS MS LG SFDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFTIR V++ YHP +R L+ +HYRS
Sbjct: 242 SEAATGKPYAASWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L A + Y L +P +F F A+M
Sbjct: 302 INYSEDSLRDAKGALERFYHALR----------------GLPLVAPQGGEEFVERFAAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L D ++ IN L R QA A L +R + +LG++
Sbjct: 346 NDDFGTPEACAVLFDLVREINRL---RDSDAQAA-----AGLAGRLRELGGLLGVLQLDA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LR A + D E + L I+ R AR +K + +SD IR + A+G+ L D
Sbjct: 398 DEF---LRAGAEGKVDAAEVEAL--IQARLQARADKNWAESDRIRDQITAMGVVLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|377579972|ref|ZP_09808928.1| cysteinyl-tRNA synthetase [Escherichia hermannii NBRC 105704]
gi|377538721|dbj|GAB54093.1| cysteinyl-tRNA synthetase [Escherichia hermannii NBRC 105704]
Length = 461
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/485 (45%), Positives = 291/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GED ++L R E H+D L+ L P EPR + H+P I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPDNEPRATQHIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ Q++ G AY +GDV F+VD YGQLS + L+ +AG RV V K+NP DF
Sbjct: 122 IEIVEQLIARGHAYVASNGDVMFAVDTDASYGQLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y P +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDPETIRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL+ + F F+ +M
Sbjct: 302 LNYSEENLKQARSALERLY---------------IALRGTDVNAQAAGGEAFEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L KG + L +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRLKSVDKG--------AADQLASHLRKLAGVLGLLEHD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A ++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEQFLQNGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GT WR
Sbjct: 455 GTIWR 459
>gi|118602151|ref|YP_903366.1| cysteinyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567090|gb|ABL01895.1| cysteinyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 462
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/486 (44%), Positives = 299/486 (61%), Gaps = 29/486 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+++E+ +P KVG+YVCG+T YD H+GHAR+ V FDV+ R+LR V
Sbjct: 2 LKIYNTLSKQKEVFRPINADKVGIYVCGMTVYDYCHMGHARILVIFDVIIRHLRRYFPNV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E ED +L+ R+ + H+D L LPP VEPR ++ M I
Sbjct: 62 EYVRNITDIDDKIIKRAIENKEDIYALTNRFIDAMHEDERALGVLPPDVEPRATNAMKQI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI +++ GFAY+ +GDVY+SV F YG+LS + ++ AG R+ ++S KKNP DF
Sbjct: 122 FYMIKSLIEKGFAYQAHNGDVYYSVRHFKNYGKLSRKNIDKLEAGARIEIESAKKNPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W+SPWG GRPGWHIECSAMS +LG+ FDIHGGGMDL FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGQGRPGWHIECSAMSTHHLGNHFDIHGGGMDLSFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A N + ++ W+H GFV ID EKMSKSL NFFTIR ++E Y+ LR F++ +HYRSP
Sbjct: 242 SEGANNCTFVNTWMHIGFVNIDDEKMSKSLNNFFTIRSILESYNCETLRYFIMSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S L A + +Y + L ++ + + +P S+ F ++
Sbjct: 302 LNFSDDNLNKAKSSLSRLYTAIR------GLNTSSTVTEKVPMYFDYSVR-----FNEAL 350
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+D +T + L+ L + KT+N L +K QA +LA L K + + + +L + +
Sbjct: 351 DNDFNTPIALSILFELAKTVN--LQRKKDVDQA---NALAQLLKKLGDYIGILQMDA--- 402
Query: 495 SEVLLQLREKALKRA-DLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+K LK+ L+ +V +I R AR +K + SD IR LA +GI L D+
Sbjct: 403 --------DKFLKQGISLSNSEVDVKITSRNEARADKNFALSDQIRDKLAELGIVLEDNA 454
Query: 554 VGTTWR 559
TTWR
Sbjct: 455 NDTTWR 460
>gi|387886020|ref|YP_006316319.1| cysteinyl-tRNA synthetase [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386870836|gb|AFJ42843.1| cysteinyl-tRNA synthetase [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 459
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/486 (43%), Positives = 284/486 (58%), Gaps = 31/486 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
YN++S K+E KP K+ MYVCG+T YD HIGHAR + FDV+ RY ++ G++V +
Sbjct: 3 FYNSLSSKKEEFKPIEPNKIKMYVCGITVYDDCHIGHARTNIAFDVINRYFKYRGFDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII R+NE GE L R + H L+ L P+ EPR + +P +I
Sbjct: 63 VRNITDIDDKIIKRSNENGETIDQLVERTIKSMHDAFDKLNILRPTKEPRATQTIPEMIA 122
Query: 198 MITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI +++ GFAY+ +GDV++ V KF +YG+LS + LE G RV V K+NP DF L
Sbjct: 123 MIQTLVEKGFAYQGTNGDVFYRVAKFADYGKLSKQNLEALEQGSRVDVVEEKENPMDFVL 182
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK AKEGEP W+SPWG GRPGWHIECSAMS LG +FDIH GG DL FPHHENEIAQS
Sbjct: 183 WKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHHENEIAQSE 242
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +YW+H+G V +++EKMSKSL NFFTI +V+E YHP +R L T YRS IN
Sbjct: 243 ACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTINEVIEEYHPEVIRYLLASTVYRSEIN 302
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L++A + + L D E ++ ++P D N++ F+ +M +
Sbjct: 303 YSKENLDNARASVERFFNALRDIE---------PVEVNLPDDA----NEYEEKFIKAMDN 349
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L K IN L K K +R + VLG++ T
Sbjct: 350 DFNTPEALAVLFSLAKEINTLKTVNKYKASGYAF--------LLRKLCDVLGILFTD--- 398
Query: 497 VLLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
E+ K+ D ++R I +R A+K+K Y ++D IR +L GI L DS G
Sbjct: 399 -----TEEYFKQGDSVNVSEIERLIAERAQAKKDKNYARADEIRNELQNQGIILEDSATG 453
Query: 556 TTWRPA 561
TTW+
Sbjct: 454 TTWKKG 459
>gi|254973704|ref|ZP_05270176.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-66c26]
gi|255091094|ref|ZP_05320572.1| cysteinyl-tRNA synthetase [Clostridium difficile CIP 107932]
gi|255312749|ref|ZP_05354332.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-76w55]
gi|255515509|ref|ZP_05383185.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-97b34]
gi|255648602|ref|ZP_05395504.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-37x79]
gi|306518726|ref|ZP_07405073.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-32g58]
gi|384359372|ref|YP_006197224.1| cysteinyl-tRNA synthetase [Clostridium difficile BI1]
Length = 465
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/483 (42%), Positives = 292/483 (60%), Gaps = 23/483 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R +E P EGKV MYVCG T Y+ HIG+AR ++ FD L RYL + GY+V Y
Sbjct: 3 VYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDVTY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII R++E G P ++ +Y +E+ D L +V P+V+D++ II+
Sbjct: 63 VQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQIIE 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++ D G+AY V+GDVYF +KF YG+LSG+K ED AG R+ V+ +K++P DF LW
Sbjct: 123 FIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFVLW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W+SPWG GRPGWHIECS MS YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 183 KAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
YW+HNG++ I+ EKMSKS GNFFT+R + +LY +R F++ HYR+P+N+
Sbjct: 243 RSGKIFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPVNF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L A + +Y T E LS L + L + + V ++ F F+ +M DD
Sbjct: 303 SDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEK-EVELVKELDDFRQKFIDAMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
++T ++ + + K IN + SL +K + + G+++
Sbjct: 362 VNTADAVSVIFELAKLINSNVDENS---------SLEFAKKCLDEFNELTGVLNI----- 407
Query: 498 LLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K+ D D+ ++ I+ RT A+KNKE++ +D IR+ L +GI L D+ G
Sbjct: 408 -------VNKKKDTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTRQGV 460
Query: 557 TWR 559
W+
Sbjct: 461 KWK 463
>gi|54297226|ref|YP_123595.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Paris]
gi|61216143|sp|Q5X5P9.1|SYC_LEGPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53751011|emb|CAH12422.1| cysteine tRNA synthetase [Legionella pneumophila str. Paris]
Length = 456
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/490 (43%), Positives = 290/490 (59%), Gaps = 45/490 (9%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN+++RK+E GK+GMYVCG+T YD H+GHAR V FDV+ RYLR G++V
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARA+E G L+ +Y + + D L+ LPP EPR + H+ I
Sbjct: 62 TYVRNITDIDDKIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I +I ++L+ G AY D GDV + VD FPEYG+LS + +E +G RV + K++P DF
Sbjct: 122 IRLIQRLLEKGNAYVSDNGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +YW+H G + ++ EKM+KS+GNF+TI V++ +HP +R FL+ +HYRSP
Sbjct: 242 SEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSI--NKFHNDFLA 432
+NYS L +A + + +YQ + D +PP T S + F
Sbjct: 302 LNYSEENLLNAKKALIRLYQAVKD----------------VPPQTADSKLDEYWQEQFNQ 345
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M+DD +T V L+ L +N + AL T++N+ +LG
Sbjct: 346 AMNDDFNTPVALSVLFQLAHEVNK--------------SNSPALAHTLKNLAGILG---- 387
Query: 493 GYSEVLLQLREKALKRADLTEDQVL---QRIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LQ ++ ++ L E++ L Q I +R AR + + K+D IR DL + GI L
Sbjct: 388 -----FLQKDPESFLQSGLAEEEKLVIEQLIAERLQARAERNWAKADQIRADLLSKGIEL 442
Query: 550 MDSPVGTTWR 559
D GTTWR
Sbjct: 443 EDGATGTTWR 452
>gi|74311083|ref|YP_309502.1| cysteinyl-tRNA synthetase [Shigella sonnei Ss046]
gi|383177100|ref|YP_005455105.1| cysteinyl-tRNA synthetase [Shigella sonnei 53G]
gi|414574725|ref|ZP_11431934.1| cysteinyl-tRNA synthetase [Shigella sonnei 3233-85]
gi|415852442|ref|ZP_11528807.1| cysteinyl-tRNA synthetase [Shigella sonnei 53G]
gi|418262555|ref|ZP_12883934.1| cysteinyl-tRNA synthetase [Shigella sonnei str. Moseley]
gi|420357139|ref|ZP_14858155.1| cysteinyl-tRNA synthetase [Shigella sonnei 3226-85]
gi|420362062|ref|ZP_14862988.1| cysteinyl-tRNA synthetase [Shigella sonnei 4822-66]
gi|109894944|sp|Q3Z4P5.1|SYC_SHISS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|73854560|gb|AAZ87267.1| cysteine tRNA synthetase [Shigella sonnei Ss046]
gi|323163965|gb|EFZ49773.1| cysteinyl-tRNA synthetase [Shigella sonnei 53G]
gi|391288875|gb|EIQ47374.1| cysteinyl-tRNA synthetase [Shigella sonnei 3226-85]
gi|391289353|gb|EIQ47848.1| cysteinyl-tRNA synthetase [Shigella sonnei 3233-85]
gi|391296989|gb|EIQ55065.1| cysteinyl-tRNA synthetase [Shigella sonnei 4822-66]
gi|397903092|gb|EJL19399.1| cysteinyl-tRNA synthetase [Shigella sonnei str. Moseley]
Length = 461
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYAADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L EK ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTEKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|418511935|ref|ZP_13078183.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366084252|gb|EHN48163.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
Length = 461
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/485 (46%), Positives = 297/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ A + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGEDMA----AANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V LQ +A ++ E + L I+ R ARK K++ +DA R LA +GI L D P
Sbjct: 398 PDVFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|293392469|ref|ZP_06636789.1| cysteine-tRNA ligase [Serratia odorifera DSM 4582]
gi|291424871|gb|EFE98080.1| cysteine-tRNA ligase [Serratia odorifera DSM 4582]
Length = 461
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/485 (45%), Positives = 289/485 (59%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY++
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE L+ R E H D L P +EPR + H+ I
Sbjct: 62 NYVRNVTDVDDKIIRRAAENGETCDQLTGRMLAEMHADFDALLIERPDLEPRATQHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY +GDV F++D +YG LS + L+ +AG RV VD K+NP DF
Sbjct: 122 IELTERLIARGHAYVASNGDVMFAIDSDADYGLLSRQDLDQLQAGARVEVDDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W+SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLGYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL+ + P T +F F +M
Sbjct: 302 LNYSEENLKQARASLERLY---------------TALRGTDPLATPDGGAEFEARFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D + +N L + AM E +R + VLGL+
Sbjct: 347 DDDFNTPEAYSALFDLAREVNRLKNEDMAAANAMAAE--------LRKLAKVLGLLQQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A ++ E + L I+ R ARK+K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDGEVAEIEAL--IKQRNDARKSKDWALADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|332160825|ref|YP_004297402.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665055|gb|ADZ41699.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860142|emb|CBX70464.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica W22703]
Length = 461
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/486 (45%), Positives = 292/486 (60%), Gaps = 30/486 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EPR + H+P I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ AY +GDV FSV+ P+YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTERLIARNHAYVAANGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L + ++AA + +F F A+M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTD-----VNAAPAGGA----------EFEARFRAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + AL +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDIAREVNRL--------KAEDITAANALAAELRKLAHVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTE-DQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E+ LQ + +AD E ++ I+ R AR +K++ +D+ R L +GI L D P
Sbjct: 398 PELFLQ----SGAQADGDEVAKIEALIKQRNDARTSKDWALADSARDQLNELGIVLEDGP 453
Query: 554 VGTTWR 559
GT WR
Sbjct: 454 QGTVWR 459
>gi|260681821|ref|YP_003213106.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
gi|260685418|ref|YP_003216551.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
gi|260207984|emb|CBA60138.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
gi|260211434|emb|CBE01534.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
Length = 467
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/483 (42%), Positives = 292/483 (60%), Gaps = 23/483 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R +E P EGKV MYVCG T Y+ HIG+AR ++ FD L RYL + GY+V Y
Sbjct: 5 VYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDVTY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII R++E G P ++ +Y +E+ D L +V P+V+D++ II+
Sbjct: 65 VQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++ D G+AY V+GDVYF +KF YG+LSG+K ED AG R+ V+ +K++P DF LW
Sbjct: 125 FIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFVLW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W+SPWG GRPGWHIECS MS YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
YW+HNG++ I+ EKMSKS GNFFT+R + +LY +R F++ HYR+P+N+
Sbjct: 245 RSGKIFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPVNF 304
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L A + +Y T E LS L + L + + V ++ F F+ +M DD
Sbjct: 305 SDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEK-EVELVKELDDFRQKFIDAMDDD 363
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
++T ++ + + K IN + SL +K + + G+++
Sbjct: 364 VNTADAVSVIFELAKLINSNVDENS---------SLEFAKKCLDEFNELTGVLNI----- 409
Query: 498 LLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
K+ D D+ ++ I+ RT A+KNKE++ +D IR+ L +GI L D+ G
Sbjct: 410 -------VNKKKDTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTRQGV 462
Query: 557 TWR 559
W+
Sbjct: 463 KWK 465
>gi|333925975|ref|YP_004499554.1| cysteinyl-tRNA synthetase [Serratia sp. AS12]
gi|333930928|ref|YP_004504506.1| cysteinyl-tRNA synthetase [Serratia plymuthica AS9]
gi|386327799|ref|YP_006023969.1| cysteinyl-tRNA synthetase [Serratia sp. AS13]
gi|333472535|gb|AEF44245.1| cysteinyl-tRNA synthetase [Serratia plymuthica AS9]
gi|333490035|gb|AEF49197.1| cysteinyl-tRNA synthetase [Serratia sp. AS12]
gi|333960132|gb|AEG26905.1| cysteinyl-tRNA synthetase [Serratia sp. AS13]
Length = 461
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/485 (46%), Positives = 287/485 (59%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE L+ R E H D L P EPR + H+ I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++D AY +GDV FS+D P+YG LS + L+ +AG RV +D K+NP DF
Sbjct: 122 IEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W+SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA A F F +M
Sbjct: 302 LNYSEENLKQARTALERLY-------TALRGTDANA--------QPAGGEAFEARFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D + +N L KG+ A + L +R + VLGL+
Sbjct: 347 DDDFNTPEAYSALFDLARDVNRL----KGEDMA----AANGLAAELRKLAKVLGLLQQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A A++ E + L I+ R ARK K++ +DA R L + I L D P
Sbjct: 398 PEQFLQSGAQA-DDAEVAEIEAL--IKQRNDARKAKDWALADAARDRLNEMSIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|197263729|ref|ZP_03163803.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197241984|gb|EDY24604.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
Length = 461
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/485 (46%), Positives = 297/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWSSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGED----MTAANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V LQ +A ++ E + L I+ R ARK K++ +DA R LA +GI L D P
Sbjct: 398 PDVFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|20808681|ref|NP_623852.1| cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
gi|22257048|sp|Q8R7T3.1|SYC_THETN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|20517317|gb|AAM25456.1| Cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
Length = 467
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/482 (41%), Positives = 286/482 (59%), Gaps = 20/482 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNTM+R +E KP + V MYVCG T Y+ HIG+AR ++ FD + RYL + GY V Y
Sbjct: 3 LYNTMTRTKEEFKPLKDKVVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGYTVNY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDKII RA E ++ R+ EE+ +D L +V PR ++H+ II+
Sbjct: 63 VQNFTDIDDKIINRAKEENTTEKEIAERFIEEYFKDADALGIKRATVHPRATEHIDDIIE 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++D G+AY VDG+VYF KF +YG+LS + +++ AG RV +D +KKNP DFALW
Sbjct: 123 FIKILIDKGYAYVVDGNVYFETAKFKDYGKLSHKNIDELMAGARVEIDEKKKNPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ K GEP W+SPWG GRPGWHIECS MS YLG + DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A + YW+H G++ +++EKMSKS GNFFT+R++ E Y P LRLF++ HYRSPIN+
Sbjct: 243 AYDQPFSKYWMHIGYLNVNNEKMSKSKGNFFTVRELTEKYDPEVLRLFMLMAHYRSPINF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S+ L+ A + + + + ++ L D D + +++ F +M DD
Sbjct: 303 SLDLLDQAKSAYERLSNAVVNLKHLANITKDRELSDE-EKDLIVKFDEYKKQFEEAMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T ++ L + KT N L KK +E + L + ++ Y
Sbjct: 362 FNTADAISVLFEMAKTANANLSGNSSKK---------LVEYILEMFLKLSDVLGLSYKNA 412
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
++ ++++L+ IE+R ARK K ++ +D IR L GI L D+P G
Sbjct: 413 ----------ETEIEDEEILRLIEERQKARKEKNWKLADEIRDKLKERGIILEDTPEGVR 462
Query: 558 WR 559
W+
Sbjct: 463 WK 464
>gi|398857260|ref|ZP_10612961.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM79]
gi|398241109|gb|EJN26768.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM79]
Length = 460
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 285/489 (58%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H+D L+ P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMIAAMHEDEARLNIKKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+AK GEP W SPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWPSPWGDGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPSVAPAGGEAFVERFTQVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL L +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELAS-------VLGVLQLEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L+ A R D E L I+ R AR NK++ +SD IR L A+G+ L D
Sbjct: 399 DF------LQAGAEGRVDAAEVDAL--IQARLTARANKDWAESDRIRDQLTAMGVVLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|15896425|ref|NP_349774.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
gi|337738383|ref|YP_004637830.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum DSM 1731]
gi|384459893|ref|YP_005672313.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
gi|21264018|sp|Q97ED6.1|SYC_CLOAB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|15026246|gb|AAK81114.1|AE007813_1 Cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
gi|325510582|gb|ADZ22218.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
gi|336292051|gb|AEI33185.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum DSM 1731]
Length = 464
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/485 (41%), Positives = 297/485 (61%), Gaps = 30/485 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNTM+RK+E P +V MYVCG T Y+ HIG+AR ++ FD + +Y + GY+V +
Sbjct: 3 IYNTMTRKKEEFVPVKPNEVQMYVCGPTVYNFFHIGNARTFIVFDTVRKYFEYRGYKVNF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTD+DDK+IA+AN G L RY +E+++D L+ + PR ++++ IID
Sbjct: 63 IQNFTDIDDKMIAKANNEGVSVKELGDRYIKEYYEDADGLNLERATCNPRATEYIGKIID 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ + D G+AY +DGDVYF+ + F EYG+LSG+ LED AG +AVD RKK+PADFALW
Sbjct: 123 FVKGLQDEGYAYEIDGDVYFNTNAFKEYGKLSGQNLEDRMAGATIAVDDRKKSPADFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
KS K GEP WESPWG GRPGWHIECS M+ LG + DIH G +DL+FPHHENEIAQS A
Sbjct: 183 KSEKPGEPSWESPWGKGRPGWHIECSCMARDLLGDTIDIHAGAIDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
YW+H ++ I++EKMSKSL NF T R +++ Y +RLFL+ HYR+P+N+
Sbjct: 243 RTGKPFSKYWMHAAYLNINNEKMSKSLNNFLTARDILKEYDAEVIRLFLLSAHYRTPLNF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
+ +E+A + +Y T+++ SLL+ A + + + +++ + F+ M DD
Sbjct: 303 TEESIEAAKTSLERLYNTINNLG---SLLNNTAESND-DSEYLKALDSYREKFIEKMDDD 358
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI---RNVLTVLGLMSTGY 494
+T ++ + D K IN ++ + K AA+EK I R + LG++
Sbjct: 359 FNTADGISVIFDLAKDINININGKSSK---------AAVEKAISLMRELGKPLGIL---- 405
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ +++ +L ED++ IE R ARKNK++ +D IR DL GI L D+P
Sbjct: 406 ---------QKVEKHNL-EDEIQNLIEQRQNARKNKDWALADKIRDDLKERGIVLEDTPE 455
Query: 555 GTTWR 559
G W+
Sbjct: 456 GIRWK 460
>gi|83748223|ref|ZP_00945249.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|207743491|ref|YP_002259883.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum IPO1609]
gi|83725064|gb|EAP72216.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|206594889|emb|CAQ61816.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum IPO1609]
Length = 465
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/491 (45%), Positives = 296/491 (60%), Gaps = 34/491 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R+++ P G+V MYVCG+T YD H+GHARV V FD++ R+LR Y+V
Sbjct: 4 LKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASAYDV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R+ H+D L P EPR ++++P +
Sbjct: 64 TYVRNITDIDDKIIKRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYVPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++ NG AY+ DGDV ++V KFP YG+LSG+ LED RAGERVA + K++P DF
Sbjct: 124 LSMIGKLQANGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDAKQDPLDF 183
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWKSAK EP W SPWG GRPGWHIECSAMS LG FD+HGGG DL FPHHENE
Sbjct: 184 VLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQ+ A N+ ++ W+HNGFV ++ EKMSKSLGNFFTIR+V+++Y P +R F++ +HY
Sbjct: 244 IAQAEGANGNTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILRSHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RS +NYS L+ A + +Y L D A+ PD S + F
Sbjct: 304 RSDLNYSDAHLDDARHALTRLYTALKDVPAAV----------GAKPDWSESHGQ---RFR 350
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M+DD +T V +A L + +N K + A+ + LAAL V+GL+
Sbjct: 351 EAMNDDFNTPVAMAVLFELASEVN------KTRSPAL-VNQLAALG-------GVMGLLG 396
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
L A D E V RIE R VA+ +++ ++D IR DL A GI L D
Sbjct: 397 RDPHAFLQGGVGAAADGLDAAE--VEARIEARRVAKAERDFARADGIRADLLAAGIVLED 454
Query: 552 SPVGTT-WRPA 561
P G T WR A
Sbjct: 455 KPGGVTEWRRA 465
>gi|423197293|ref|ZP_17183876.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila SSU]
gi|404630981|gb|EKB27617.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila SSU]
Length = 458
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/490 (46%), Positives = 296/490 (60%), Gaps = 37/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YD HIGH R +V FDV+ RYLR+ GY++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYSGYQL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E G L+ R + H D L + P VEPR + H+ I
Sbjct: 62 NYVRNVTDVDDKIIKRAAETGVTCDDLTERLIGDMHADFDALGMVRPDVEPRATQHIGEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +LD AY D GDV F VD + +YG+LSG+ LE +AG RV V K+NP DF
Sbjct: 122 IELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W+SPWGPGRPGWHIECSAM++ +LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L D +A AAA D + +F +M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPEA-----AAAGGDE-------QVARFKE----AM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D ++ IN +KG+ A+ A L +R + VLG
Sbjct: 346 DDDFNTPEAYSALFDLVREIN----RQKGEDMAV----AAGLGARLRELGAVLG------ 391
Query: 495 SEVLLQLREKALKRADLTEDQV--LQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+LQ A + D +D+V ++R I +R AR +K + +DA R L +GI L D
Sbjct: 392 ---ILQQDPDAFLKGDEADDEVAEIERLITERNQARADKNWAAADAARARLTEMGIVLED 448
Query: 552 SPVGTTWRPA 561
S T+WR A
Sbjct: 449 SAGKTSWRRA 458
>gi|260582005|ref|ZP_05849800.1| cysteinyl-tRNA synthetase [Haemophilus influenzae NT127]
gi|260094895|gb|EEW78788.1| cysteinyl-tRNA synthetase [Haemophilus influenzae NT127]
Length = 459
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/488 (45%), Positives = 292/488 (59%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +++ A A F F +M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGADQS-----AVAFGGE----------NFVETFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + IN L +A +E L +R + +LG
Sbjct: 347 DDDFNTPNALSVLFEMAREINKL--------KAEDVEKANGLAARLRELGAILG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LLQ + +A +D+V + I+ R AR K++ +DA R +L A+GI L D
Sbjct: 393 ---LLQQEPEKFLQAGSNDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLED 449
Query: 552 SPVGTTWR 559
GTTWR
Sbjct: 450 GANGTTWR 457
>gi|325288490|ref|YP_004264671.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
gi|324963891|gb|ADY54670.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
Length = 476
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/485 (43%), Positives = 299/485 (61%), Gaps = 20/485 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT+ +++E P+ GKV MY CG T Y+ H+G+AR+ V FD++ RYL + GYEV Y
Sbjct: 5 IYNTIHKEKEEFIPREAGKVAMYACGPTTYNYFHLGNARMLVVFDMVRRYLAYKGYEVTY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII RA+E +P++L+ RY EE+++D L+ P +V P+ +DH+ +I+
Sbjct: 65 VQNFTDVDDKIIKRASEENCEPLALAGRYIEEYYKDANALNIQPATVHPKATDHIKEMIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I + G AY V+GDVYF+V+ FP+YG+LSGR LED +AG RV +D +K NP DFALW
Sbjct: 125 IIKGLEKKGLAYPVEGDVYFAVEHFPQYGRLSGRNLEDLQAGARVEIDDKKLNPMDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K AK GEP W SPWG GRPGWHIECSAM+ YLG +FDIHGGG DLVFPHHENEIAQS
Sbjct: 185 KKAKPGEPAWPSPWGDGRPGWHIECSAMALKYLGPNFDIHGGGGDLVFPHHENEIAQSEG 244
Query: 318 ACNNSHIS-YWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
+ + YW+HN F+T++ EKMSKSLGNFF IR +++ + +R +L+GTHYRSP++
Sbjct: 245 YLDGEQFARYWMHNAFITVNQEKMSKSLGNFFMIRDILKKFPGEVVRFYLLGTHYRSPLD 304
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSL---LDAAALKDSIPPDTVTSINKFHNDFLAS 433
+ +LE A+ + + ++ +ALS D+A + + + + +K F +
Sbjct: 305 FDDEKLEMAARGLDRLKTSVRLAGEALSKGKSTDSAGTRGEL----LNASSKARAAFEEA 360
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD ++ A+L D K IN L+ + +A T+ ++ +LG
Sbjct: 361 MEDDFNSAQAYASLFDLAKEINTALN-----EGGWTGAQIAEARDTLIDLAGILGFDLQK 415
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
SEV K +L +E R AR +K++ +D IR L I L D+
Sbjct: 416 DSEVPAGESGKFNAVMELV-------LELRAKARADKDWSTADLIRDRLKEASIILEDTA 468
Query: 554 VGTTW 558
G+ W
Sbjct: 469 EGSRW 473
>gi|385809061|ref|YP_005845457.1| cysteinyl-tRNA synthetase [Ignavibacterium album JCM 16511]
gi|383801109|gb|AFH48189.1| Cysteinyl-tRNA synthetase [Ignavibacterium album JCM 16511]
Length = 469
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/484 (42%), Positives = 290/484 (59%), Gaps = 20/484 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++++E P V MY+CG T YD HIG+AR ++ D++ RYL + GY V
Sbjct: 2 LKIYNTLTKQKEEFTPLNSPLVKMYICGPTVYDYFHIGNARSFIMSDIVRRYLEYKGYVV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V N TDVDDKII +ANE G+ ++ Y EF D+ L P + PR ++ M +
Sbjct: 62 TFVMNLTDVDDKIIKKANEEGKSAKEVAEFYIREFFTDIEKLRIKPATYYPRATEFMNDM 121
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I+MI ++ + G AY VDG+V++ V KF +YG+LSG+K E+ AG RV V+ +KK+P DFA
Sbjct: 122 IEMIKRLEEKGIAYNVDGNVFYDVSKFMDYGKLSGKKTEELEAGARVEVNEQKKHPLDFA 181
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK AKEGEP+WESPWG GRPGWHIECSAMS LG SFDIH GG DL+FPHHENEIAQS
Sbjct: 182 LWKKAKEGEPYWESPWGKGRPGWHIECSAMSCKLLGESFDIHAGGHDLIFPHHENEIAQS 241
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA YW+H GF+ I+ EKMSKSLGNFFT R++++ Y A+RLF + HYR P+
Sbjct: 242 EAANEKPFAKYWLHFGFLNINEEKMSKSLGNFFTAREILKKYSAEAIRLFFVQAHYRGPL 301
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
N+S L++A + + I Q L D L+ K S + +++ F +M
Sbjct: 302 NFSDELLQAAEKGVEKI-QNLADK------LNEELNKTSEGKKVNFNFEQWYKKFEEAMD 354
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD ++ A L D + +N L+ + + E+ + L+KT VL V+
Sbjct: 355 DDFNSAQATAVLFDFTREVNRLIAESENPDKQFLTEAKSFLKKTADEVLGVVNF------ 408
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
EK L D + I+ RT A++NK Y SD IR +L +G+ L D+ G
Sbjct: 409 -------EKKEDLPSLENDLIELLIKIRTEAKQNKNYALSDKIRDELKNLGVILQDTKEG 461
Query: 556 TTWR 559
T+++
Sbjct: 462 TSFK 465
>gi|253988481|ref|YP_003039837.1| cysteinyl-tRNA synthetase [Photorhabdus asymbiotica]
gi|253779931|emb|CAQ83092.1| cysteinyl-tRNA synthetase [Photorhabdus asymbiotica]
Length = 461
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/489 (43%), Positives = 289/489 (59%), Gaps = 36/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP G VGMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY++
Sbjct: 2 LKIFNTLSRQKEEFKPIHPGIVGMYVCGITIYDLCHIGHGRTFVAFDVIARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E ++D L+ L P +EPR + H+P I
Sbjct: 62 TYVRNVTDVDDKIIKRAAENHESCDDLTSRMLAEMYKDFDALNILRPDLEPRATRHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ ++ G AY D GDV FSV+ +YG LS + L +AG RV V K+NP DF
Sbjct: 122 IELTESLIKRGHAYVADNGDVMFSVESDSDYGALSRQDLSQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGKGRPGWHIECSAMNGKQLGNHFDIHGGGADLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSL NFFTIR V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLKYYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + +Y L + ++S F F+ +M
Sbjct: 302 LNYTEENLKQARTALERLYTALRGTDASVSPAGGEV---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + IN L ++ L + L +R + +LGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREINCL--------KSEDLSAANGLAAVLRKLAGILGLLE--- 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGIALM 550
Q E+ L +D+ + +IE R ARKNK++ +D+ R L +GI L
Sbjct: 396 -----QDPEQFLHSGVQVDDEDIAKIEALIKQRNDARKNKDWTLADSARDQLNEMGIELE 450
Query: 551 DSPVGTTWR 559
D P GT+WR
Sbjct: 451 DGPQGTSWR 459
>gi|260655864|ref|ZP_05861333.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|424844377|ref|ZP_18268988.1| cysteinyl-tRNA synthetase [Jonquetella anthropi DSM 22815]
gi|260629480|gb|EEX47674.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|363985815|gb|EHM12645.1| cysteinyl-tRNA synthetase [Jonquetella anthropi DSM 22815]
Length = 467
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/484 (42%), Positives = 287/484 (59%), Gaps = 22/484 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN ++R +EL P +GKV Y CG T YD HIG+AR ++ FDVL RYL + GY+V
Sbjct: 3 LSLYNDLTRNKELFVPLADGKVSFYSCGPTVYDYFHIGNARPFIVFDVLRRYLEYKGYQV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+V+NFTD+DDK+I RAN G L+ + ++++D L S PR +++MP I
Sbjct: 63 TFVQNFTDIDDKMIDRANRDGITVAQLAEKTIADYYEDADALGIKRASYNPRATEYMPQI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I ++ +++D G AY V G VYF V FP+YG+LS + +++ AG R+ VD KK P DF
Sbjct: 123 IQLVQKLIDRGHAYAVGGTVYFDVKSFPQYGRLSKQNMDELLAGARIEVDDAKKCPLDFV 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK K GEP W+SPWG GRPGWHIECS MS A LG + DIH GG+DL FPHHENEIAQ+
Sbjct: 183 LWKPQKPGEPAWDSPWGKGRPGWHIECSVMSTALLGDTIDIHSGGVDLTFPHHENEIAQA 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
AA +++W+HN ++ ID EKMSKSLGNF T R+ + Y PLA+R F++ HYRSP+
Sbjct: 243 EAATGKPFVNFWLHNEYILIDKEKMSKSLGNFLTAREARKHYSPLAIRAFMLSAHYRSPV 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
N+S LE A + + D + A S D + S+ ++ + DF +M
Sbjct: 303 NFSPEGLEQAGAMVERLRNCWSDLQFAKSRRDLSYDDASLS----EAVRQGREDFEEAMD 358
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T L A+ + +K +N L + A+ + L EK R++ V+GL+
Sbjct: 359 DDFNTAGALGAVFEVVKAVNTHLKS----SGALSGKGLDDAEKFFRDIEEVMGLL----- 409
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
L + ++ +E R ARK K + +SD +R +LAA GI L D+P G
Sbjct: 410 ---------GLSHETDGDAEIDALVEQRNAARKAKNFAESDRLRDELAARGIVLEDTPQG 460
Query: 556 TTWR 559
T W+
Sbjct: 461 TKWK 464
>gi|386333865|ref|YP_006030036.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum Po82]
gi|334196315|gb|AEG69500.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum Po82]
Length = 465
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/491 (43%), Positives = 294/491 (59%), Gaps = 34/491 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R+++ P G+V MYVCG+T YD H+GHARV V FD++ R+LR Y+V
Sbjct: 4 LKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASAYDV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R+ H+D L P EPR ++++P +
Sbjct: 64 TYVRNITDIDDKIIRRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYVPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++ NG AY+ DGDV ++V +FP YG+LSG+ LED RAGERVA + K++P DF
Sbjct: 124 LSMIGKLQANGLAYQAADGDVNYAVRRFPGYGKLSGKSLEDLRAGERVAANDAKQDPLDF 183
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWKSAK EP W SPWG GRPGWHIECSAMS LG FD+HGGG DL FPHHENE
Sbjct: 184 VLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQ+ A ++ ++ W+HNGFV ++ EKMSKSLGNFFTIR+V+++Y P +R F++ +HY
Sbjct: 244 IAQAEGANGSTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILRSHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RS +NYS L+ A + +Y L D +A A D P F
Sbjct: 304 RSDLNYSDAHLDDARHALTRLYTALKDVPA-----EAGAQPDWSEPHG--------QRFR 350
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M+DD +T V +A L + +N R +LA+ + V+ +LG
Sbjct: 351 EAMNDDFNTPVAMAVLFELASEVNK-----------TRSPALASQLAALGGVMGLLGRDP 399
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ + + L A +V RIE R VA+ +++ ++D IR DL A GI L D
Sbjct: 400 HAFLQGGVGAAADGLDTA-----EVEARIEARRVAKAARDFARADGIRADLLAAGIVLED 454
Query: 552 SPVGTT-WRPA 561
P G T WR A
Sbjct: 455 KPGGVTEWRRA 465
>gi|325295505|ref|YP_004282019.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065953|gb|ADY73960.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 472
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/487 (43%), Positives = 312/487 (64%), Gaps = 26/487 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
++NT++ K+E KP + V MYVCG T YD +HIGHAR + FDV+ R+ + GY V Y
Sbjct: 4 VFNTLTEKKEEFKPLNDKTVKMYVCGPTVYDHAHIGHARSAIVFDVIRRWFEYRGYRVIY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN+TDVDDKII R+ E G ++++Y E + +DM L+ P+ +P+V++H+ II+
Sbjct: 64 VRNYTDVDDKIIKRSKEEGIPWYEVAKKYIESYEEDMKALNIKEPTYKPKVTEHIEEIIE 123
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
MI ++ G+AY +GDVYFSV+KF EYG+LS RK E+ AG R+ +KKNP DFALW
Sbjct: 124 MIKGLIAKGYAYESEGDVYFSVEKFSEYGKLSKRKTEELIAGARIEPGEKKKNPLDFALW 183
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K +KEGEP WESPWG GRPGWHIECSAM+ YLG + DIHGGG+DL+FPHHENEIAQS A
Sbjct: 184 KKSKEGEPGWESPWGIGRPGWHIECSAMAMKYLGRTMDIHGGGLDLIFPHHENEIAQSEA 243
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
S + YW+HNGFV ++ EKMSKSLGNFFTI+ +++ + LRLFL+ THYRSPI++
Sbjct: 244 YTGKSFVRYWLHNGFVMVNKEKMSKSLGNFFTIKDILKEFSSDVLRLFLLSTHYRSPIDF 303
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPP----DTVTSINKFHNDFLAS 433
S +L+ A ER F + L+ +++ + + +P + + + F ++
Sbjct: 304 SFERLKDA-ERSF---------GRLLNFIESKEIIEKLPTFEKNSEIFDVENYKLQFESA 353
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T L + + +K N + K +A++ ++ EK +L +G++ +
Sbjct: 354 MDDDFNTARALGVIFELVKEANLI------KDKAIKENKISNKEK--ETILKAIGIVES- 404
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIED-RTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
Y ++L EK K+ + ED++++ + D R+ RK K ++ +D IR L +GI L D
Sbjct: 405 YLKLLGFKLEK--KKQEGIEDELIKLLIDVRSELRKRKAFDLADKIRDGLKDLGIILEDL 462
Query: 553 PVGTTWR 559
P GT ++
Sbjct: 463 PSGTIYK 469
>gi|419839695|ref|ZP_14363100.1| cysteine--tRNA ligase [Haemophilus haemolyticus HK386]
gi|386909118|gb|EIJ73795.1| cysteine--tRNA ligase [Haemophilus haemolyticus HK386]
Length = 459
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/488 (46%), Positives = 294/488 (60%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +++ A A F F +M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQS-----AVAFGGE----------NFVATFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + IN L + +E L +R + +LGL
Sbjct: 347 DDDFNTPNALSVLFEMAREINKL--------KTEDVEKANGLAARLRELGAILGL----- 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
L Q EK L+ A +D+V + I+ R AR K++ +DA R +L A+GI L D
Sbjct: 394 ---LQQDPEKFLQ-AGSNDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPNGTTWR 457
>gi|420370198|ref|ZP_14870814.1| cysteinyl-tRNA synthetase [Shigella flexneri 1235-66]
gi|391320627|gb|EIQ77459.1| cysteinyl-tRNA synthetase [Shigella flexneri 1235-66]
Length = 461
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/485 (46%), Positives = 295/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V+FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H D L+ L P +EPR + H+P I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHNDFDALNILRPDLEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YGQLS + L+ +AG RV V K+NP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+++ A F F+ +M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L KG+ A A L R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL----KGEDMAAANAMAAHL----RKLSGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A ++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PETFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|386309410|ref|YP_006005466.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418240598|ref|ZP_12867136.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433550489|ref|ZP_20506533.1| Cysteinyl-tRNA synthetase [Yersinia enterocolitica IP 10393]
gi|318604716|emb|CBY26214.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|351780011|gb|EHB22100.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431789624|emb|CCO69573.1| Cysteinyl-tRNA synthetase [Yersinia enterocolitica IP 10393]
Length = 461
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/486 (45%), Positives = 292/486 (60%), Gaps = 30/486 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EPR + H+P I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ AY +GDV FSV+ P+YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTERLIARNHAYVAANGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLVYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L + ++AA + +F F A+M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTD-----VNAAPAGGA----------EFEARFRAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + AL +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDIAREVNRL--------KAEDITAANALAAELRKLAHVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTE-DQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E+ LQ + +AD E ++ I+ R AR +K++ +D+ R L +GI L D P
Sbjct: 398 PELFLQ----SGAQADGDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLEDGP 453
Query: 554 VGTTWR 559
GT WR
Sbjct: 454 QGTVWR 459
>gi|440746746|ref|ZP_20926026.1| cysteinyl-tRNA ligase [Pseudomonas syringae BRIP39023]
gi|440371006|gb|ELQ07871.1| cysteinyl-tRNA ligase [Pseudomonas syringae BRIP39023]
Length = 460
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/489 (45%), Positives = 288/489 (58%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIGAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L K L L + A + F F A+M
Sbjct: 302 INYSEDSLRESKAALERFYHAL----KGLPLAEPAGGE------------AFVERFSAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL L +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVAAAAGLAARLKQLAS-------VLGVLQLEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ LR A R + E + L I+ R AR K++ +SD IR + +G+ L D
Sbjct: 399 DF------LRAGAEGRVNAAEVEAL--IQARLAARAAKDWAESDRIRDQITVMGVLLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|341926027|dbj|BAK53927.1| cysteinyl-tRNA synthetase [Chitiniphilus shinanonensis]
Length = 459
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/488 (45%), Positives = 302/488 (61%), Gaps = 40/488 (8%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT+SR++E+ +P V GKV MYVCG+T YD H+GHARV V FD++ R+LR GY V Y
Sbjct: 4 LYNTLSREKEVFRPIVPGKVNMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGYAVDY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RA E GE +L++R+ + ++D L L P EPR ++ + +
Sbjct: 64 VRNITDIDDKIIKRALENGESINALTQRFIDAMNEDADALGVLRPDHEPRATEFVGAMHQ 123
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI +++DNG AY +GDVY++V KF YG+LSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIGRLIDNGLAYSAPNGDVYYAVRKFDGYGKLSGKSLDDLRAGERVDVDPNKQDPLDFVL 183
Query: 257 WKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIA 313
WK+AK EP W+SPWG GRPGWHIECSAMS +LG FDIHGGG DL FPHHENEIA
Sbjct: 184 WKAAKADEPADAKWDSPWGAGRPGWHIECSAMSCHHLGAHFDIHGGGADLQFPHHENEIA 243
Query: 314 QSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
QS A +++YW+HNGF+ +D+EKMSKSLGNFFTIR+V++ Y +R F++ HYRS
Sbjct: 244 QSEGASGQRYVNYWMHNGFIRVDNEKMSKSLGNFFTIREVLKKYDAEVVRFFILRAHYRS 303
Query: 374 PINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVT--SINKFHNDFL 431
P+NYS + L+ A + +Y L ++P D VT + + F
Sbjct: 304 PLNYSDMHLDDARNALTRLYTALK----------------AVPADAVTLDWQSPYAARFK 347
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A+M DD +TT +A L DL H +A R +S AL ++ + VLGL+
Sbjct: 348 AAMDDDFNTTEAVAVLF-------DLAH------EANRQQS-PALAGELKALAGVLGLLG 393
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ LQ + + + +++ I R AR K + +SD IR +LAA G+ L D
Sbjct: 394 R-EPQAFLQAE---VGEGEWSAERIEAAIAARKAARAAKNWAESDRIRDELAAAGVVLED 449
Query: 552 SPVGTTWR 559
GT WR
Sbjct: 450 GAQGTGWR 457
>gi|170699316|ref|ZP_02890365.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
gi|170135808|gb|EDT04087.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
Length = 465
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/489 (45%), Positives = 300/489 (61%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R +++ P+ G+V MYVCG+T YD H+GHAR+ V FD++ R+LR +GY V
Sbjct: 4 LRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYRV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+ R+ H+D L P +EPR + +P +
Sbjct: 64 TYVRNITDIDDKIIRRALENGETIKSLTDRFIGAMHEDEAALGIQRPDIEPRATQFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++ NG+AY+ DGDV +SV KF YG+LSG+ L+D RAGERVA + K++P DF
Sbjct: 124 LGMIEKLETNGYAYQAADGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLDF 183
Query: 255 ALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AK +P W S +G GRPGWHIECSAM LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKRAKADDPQGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGFV +D+EKMSKSLGNFFTIR+V+E Y +R F++ THY
Sbjct: 244 IAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRFFIVRTHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RSP+NYS V L+ A + +Y L D E DA AL + P F
Sbjct: 304 RSPLNYSDVHLDDARASLTRLYTALKDVEP-----DALALDWNEP---------HAQRFA 349
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A+M+DD++T V +A L + +N TR A+L + ++ + +LGL+
Sbjct: 350 AAMNDDINTPVAVATLFELAGEVN---RTRD-----------ASLARQLKQLAGLLGLLG 395
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LQ A + L D++ +I R A++ K+Y ++D IR +L GIAL D
Sbjct: 396 R-EPRAFLQQATGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALED 454
Query: 552 SPVGTT-WR 559
P G+T WR
Sbjct: 455 KPGGSTEWR 463
>gi|387120512|ref|YP_006286395.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|415765542|ref|ZP_11482787.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|416040248|ref|ZP_11574423.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|347993896|gb|EGY35223.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|348653831|gb|EGY69504.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|385875004|gb|AFI86563.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 469
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/490 (45%), Positives = 290/490 (59%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NT++R++E+ KP GK+GMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E ++D L+ L P EPR + H+P I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID++ +++ G AY D GDV F V+ F +YG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 132 IDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H+G + +D EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +K+ D+ F +M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGIDKSAVAFGGENFVDA---------------FREAM 356
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T L+ L + + +N L K A RL LAA +LG
Sbjct: 357 DDDFNTPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAA----------ILG---- 402
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LLQL + +A E +V + I+ R AR K++ +DA R L +GI L
Sbjct: 403 -----LLQLDPEQFLQAGSDEGEVAKIEALIKQRNEARTAKDWAAADAARNALTKMGIIL 457
Query: 550 MDSPVGTTWR 559
D P GTTWR
Sbjct: 458 EDGPNGTTWR 467
>gi|307729279|ref|YP_003906503.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1003]
gi|307583814|gb|ADN57212.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1003]
Length = 479
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/490 (44%), Positives = 292/490 (59%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R ++ P G V MYVCG+T YD H+GHARV V FD++ R+LR LGY+V
Sbjct: 18 LRIYNTLARDKQTFVPLEPGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGYQV 77
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+ R+ + H+D L P +EPR +D +P +
Sbjct: 78 TYVRNITDIDDKIIRRAVENGETIKSLTDRFIQALHEDADALGIARPDMEPRATDFIPQM 137
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++ + G+AY+ DGDV ++V KF YG+LSG+ LED RAGERVA + K++P DF
Sbjct: 138 LGMIEKLEEKGYAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDAKEDPLDF 197
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK +K EP W+S +G GRPGWHIECSAM LG FDIHGGG DL FPHHENE
Sbjct: 198 VLWKQSKADEPADTGWDSRYGRGRPGWHIECSAMGCTLLGERFDIHGGGQDLQFPHHENE 257
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS AA ++YW+HNG+V ID+EKMSKSL NFFTIR+V+ Y +R F+ HY
Sbjct: 258 IAQSEAATGQPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRFFIARAHY 317
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDF 430
RSP+NYS V ++ A + +Y ALKD P N+ H F
Sbjct: 318 RSPLNYSDVHIDDARNALGRLY---------------TALKDVTPDGAALDWNEAHAQRF 362
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
A+M+DD +T V ++ L + +N TR AL + +R++ VLGL+
Sbjct: 363 QAAMNDDFNTPVAVSVLFELATEVN---RTRD-----------PALARQLRSLGAVLGLL 408
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
LQ A + L + +I +R A++ K+Y +D IR +L G+AL
Sbjct: 409 GR-EPRAYLQQAAGAAVQGALEPAAIEAKIAERVAAKQAKDYAAADRIRAELLEAGVALE 467
Query: 551 DSPVG-TTWR 559
D P G T WR
Sbjct: 468 DKPGGLTEWR 477
>gi|71736729|ref|YP_273919.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|109894921|sp|Q48L06.1|SYC_PSE14 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71557282|gb|AAZ36493.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 460
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/487 (44%), Positives = 283/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA + GE +L+ R + H+D L+ L P +EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L +P F F +M
Sbjct: 302 INYSEDSLRESKAALERFYHALK----------------GLPVAEPAGGEAFVERFSTAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L + ++ IN L + LAA K + +VL VL L + +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRES-----DVTAAAGLAARLKQLASVLGVLQLEADDF 400
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
LR A R D + + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 401 ------LRAGAEGRVDAAQVEAL--IQARLAARAAKDWAESDRIRDQITAMGVLLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|410461721|ref|ZP_11315367.1| cysteinyl-tRNA synthetase [Bacillus azotoformans LMG 9581]
gi|409925488|gb|EKN62699.1| cysteinyl-tRNA synthetase [Bacillus azotoformans LMG 9581]
Length = 466
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/485 (43%), Positives = 298/485 (61%), Gaps = 28/485 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
YNT++R +E KP +GKV MYVCG T Y+ HIG+AR + FD + RYL++ GYEV Y
Sbjct: 5 FYNTLTRSKEEFKPIKDGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLQYRGYEVKY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDK+I A ELGED +++ R+ + F++D+ L V PRV ++M II+
Sbjct: 65 VSNFTDVDDKLIKAAKELGEDVPTIADRFIQAFYEDVTALGVKKADVHPRVMENMDIIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++ G+AY +GDVYF KF +YG+LS + ++D R G R+ V +K++P DFALW
Sbjct: 125 FIETLIQKGYAYESEGDVYFRTRKFDDYGKLSHQPIDDLRLGARIEVGEKKQDPLDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AKEGE +WESPWG GRPGWHIECSAM+ YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KAAKEGEIYWESPWGKGRPGWHIECSAMAKKYLGETIDIHAGGQDLTFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ +YW+HNG++ ID+EKMSKSLGNF + +++ P LR F++ HYR+PIN+
Sbjct: 245 LTGKTFANYWLHNGYIQIDNEKMSKSLGNFVLVHDIIKQIDPQVLRFFMLSVHYRNPINF 304
Query: 378 SVVQLESAS---ERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
S LESA ERI Y+ L K +S L DS + + I H F+ M
Sbjct: 305 SQELLESAKSGLERIRTAYENL-SYRKVVS----TGLTDS-NEEWLKVIEGIHEQFIIEM 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD++T ++ L D K N ++ R+ + + E + A + N+ VLG
Sbjct: 359 DDDINTANAISVLFDLAKQAN--IYLRENQTSS---EVIHAFMEQFENLAGVLG------ 407
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LQ K +L ++++ + ++ R ARKN+++ +D IR L + I L D+P
Sbjct: 408 --ITLQ------KEKELLDEEIEELLQKRIDARKNRDFALADQIRDQLKDMNIVLEDTPQ 459
Query: 555 GTTWR 559
GT W+
Sbjct: 460 GTRWK 464
>gi|167855009|ref|ZP_02477783.1| cysteinyl-tRNA synthetase [Haemophilus parasuis 29755]
gi|167853857|gb|EDS25097.1| cysteinyl-tRNA synthetase [Haemophilus parasuis 29755]
Length = 459
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/492 (44%), Positives = 288/492 (58%), Gaps = 40/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP VGMYVCGVT YDL H GH R +V+FDV+ RYLR+LGY +
Sbjct: 2 LKIYNTLKREKEEFKPIYPDHVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII R+ E E L R E H+D L+ L P VEPR + H+P I
Sbjct: 62 RYVRNITDVDDKIIKRSLENNETCDQLVDRMIIEMHKDFDALNILRPDVEPRATQHIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++L G AY DGDV F+V+ F +YG LS + LE +AG RV + S K+NP DF
Sbjct: 122 IAIVEKLLAKGHAYVAEDGDVMFNVESFQKYGALSRQNLEQLQAGARVEIKSVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W+SPWG GRPGWHIECSAM++ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWDSPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G +TI+ EKMSKSL NFFTIR ++ Y ++R F + YRS
Sbjct: 242 SCCAHGDDYVNYWLHTGMLTINEEKMSKSLNNFFTIRDILNKYDCESVRYFFLTAQYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YS + A + + +Y L C+ + L + +++ F SM
Sbjct: 302 LDYSEENIGLARKALERLYTALRGCDWNVELAEN---------------DQYVTAFKESM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRK--GKKQAMRLESLAALEKTIRNVLTVLGLMST 492
DD +T LA L + + IN L + K A RL+ LA VLGL+
Sbjct: 347 DDDFNTPGALAVLFELAREINKLKAENQVEANKLAARLKQLAG----------VLGLLEQ 396
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
E LQ D D+V + I+ R AR +K + +D R L A+GI L
Sbjct: 397 D-PETFLQ--------GDANNDEVAEIEALIKQRNEARASKNWAVADEARNKLTAMGIVL 447
Query: 550 MDSPVGTTWRPA 561
D GTTWR A
Sbjct: 448 EDGANGTTWRKA 459
>gi|77459860|ref|YP_349367.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
gi|109894924|sp|Q3KA28.1|SYC_PSEPF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|77383863|gb|ABA75376.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
Length = 460
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/489 (44%), Positives = 284/489 (58%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R H+D L+ P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMIAAMHEDEARLNIKKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDEAKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V++ YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPKVAPAGGEAFVERFTQVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL L +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELAS-------VLGVLQLEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L+ A R D E L I+ R AR NK++ +SD IR L A+G+ L D
Sbjct: 399 DF------LQAGAEGRVDAAEVDAL--IQARLTARANKDWAESDRIRDQLTAMGVVLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|187924487|ref|YP_001896129.1| cysteinyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
gi|187715681|gb|ACD16905.1| cysteinyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
Length = 465
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/490 (44%), Positives = 292/490 (59%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R ++ P EG V MYVCG+T YD H+GHARV V FD++ R+LR LGY+V
Sbjct: 4 LRIYNTLARDKQTFVPLQEGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGYDV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R+ + H+D L P +EPR +D +P +
Sbjct: 64 TYVRNITDIDDKIIRRAVENGETIKALTDRFIDALHEDADALGIQRPDLEPRATDFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI Q+ NG+AY+ DGDV ++V KF YG+LSG+ LED RAGERVA + K++P DF
Sbjct: 124 LGMIEQLEANGYAYQASDGDVNYAVRKFANYGKLSGKSLEDLRAGERVAANDAKQDPLDF 183
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AK EP W+S +G GRPGWHIECSAM LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKQAKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS AA + +++W+HNG+V ID+EKMSKSL NFFTIR+V+ Y +R F+ HY
Sbjct: 244 IAQSEAATGQTFVNFWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRFFIARAHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDF 430
RSP+NYS V ++ A + +Y ALKD P N+ H F
Sbjct: 304 RSPLNYSDVHIDDARNALARLY---------------TALKDVTPDAAELDWNEAHAQRF 348
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
A+M+DD +T V ++ L + +N TR A +L SL A V+ +LG
Sbjct: 349 QAAMNDDFNTPVAVSVLFELATEVN---RTRD-PALARQLRSLGA-------VIGLLGRE 397
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
Y + + E ++ R+ A++ K+Y +D IR +L G+AL
Sbjct: 398 PRAYLQQAAGAAAEGALEPAAIEAKIAARV----AAKQAKDYAAADRIRAELLEAGVALE 453
Query: 551 DSPVGTT-WR 559
D P G+T WR
Sbjct: 454 DKPGGSTEWR 463
>gi|406940759|gb|EKD73431.1| hypothetical protein ACD_45C00321G0014 [uncultured bacterium]
Length = 460
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/488 (42%), Positives = 295/488 (60%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN++SRK+E +P +GKV +YVCG T YD HIG+AR + FD + RYLR+ GY V
Sbjct: 2 LQIYNSLSRKKETFQPIEKGKVKIYVCGPTVYDYCHIGNARSFTAFDAIVRYLRYRGYVV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE ++ IS+ + + F +DM L+ L P EP+ ++ +PHI
Sbjct: 62 TYVRNITDIDDKIIKRANESKQEFISVVEYFTQAFCEDMQKLNLLKPDDEPKATEFVPHI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ +++ N +AY +GDVYF V +F +YG LS R ++D +G RV + K++P DF
Sbjct: 122 IALVEKLIANHYAYVAANGDVYFDVRQFKQYGSLSHRNIDDLESGARVEISDVKRDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W+SPWG GRPGWHIECSAMS LG SFD+HGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMAKPGEPSWQSPWGHGRPGWHIECSAMSMQLLGESFDMHGGGKDLIFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S +A N ++YW+H G++ I+ EKMSKSLGNFFTIR +++ Y P LR FL+ HYRSP
Sbjct: 242 SESATNKKFVNYWLHAGYLQIEKEKMSKSLGNFFTIRDILKDYSPEVLRYFLLAGHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+++S L+ A + Y L D A LLD ++ F+ +M
Sbjct: 302 LHFSKDLLQQAQHALERFYTALRDLPHADDLLDT----------------EYEKQFVTAM 345
Query: 435 SDDLHTTV---VLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
DD +T + VL L+ ++ + + + + A+ L+ L VLG++
Sbjct: 346 DDDFNTPIAFSVLFELAHEIQRLRNQGDLQLAGQHAVLLKRLGG----------VLGILQ 395
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ LQ R++ + A ++ I R AR K + ++D IR +L A+ + L D
Sbjct: 396 ANAMQ-FLQGRKENMDVA-----KIESLIAARNQARAEKNWVEADRIRDELLAMSVVLED 449
Query: 552 SPVGTTWR 559
GTTW+
Sbjct: 450 GAGGTTWK 457
>gi|90411646|ref|ZP_01219656.1| cysteinyl-tRNA synthetase [Photobacterium profundum 3TCK]
gi|90327536|gb|EAS43889.1| cysteinyl-tRNA synthetase [Photobacterium profundum 3TCK]
Length = 464
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/485 (46%), Positives = 300/485 (61%), Gaps = 25/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN++++++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+ GY++
Sbjct: 2 LKIYNSLTKQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R E H+D L P +EPR ++ + I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHKDFDALGMKRPDIEPRATEFIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I M ++++ GFAY +GDV F V KF EYG+LS + L+ +AG RV +D K++P DF
Sbjct: 122 ITMCERLIERGFAYVASNGDVMFEVSKFEEYGRLSRQDLDQLQAGARVDIDMAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM++A LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 242 SCCATGSQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAESVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y +L + L L A + +F F ASM
Sbjct: 302 LNYSEENLKQARSALERLYTSL----RGLDLTAQAEGGE-----------EFVTRFTASM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D ++ IN L + + A + +AL +R + +LGL+S
Sbjct: 347 NDDFNTPEAYSVLFDMVREINRL---KADETIADNIAQASALGARLRELADILGLLSQD- 402
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ + D+ E + L I+ R AR K++ +DA R L A+ I L D P
Sbjct: 403 PEAFLQ---GGAGQDDVAEIESL--IQQRLDARAAKDWAAADAARDKLLAMKIILEDGPQ 457
Query: 555 GTTWR 559
GTTWR
Sbjct: 458 GTTWR 462
>gi|16763917|ref|NP_459532.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|62179146|ref|YP_215563.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|167990531|ref|ZP_02571631.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168231534|ref|ZP_02656592.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168261021|ref|ZP_02682994.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168818841|ref|ZP_02830841.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194472796|ref|ZP_03078780.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197251404|ref|YP_002145520.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205351838|ref|YP_002225639.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856015|ref|YP_002242666.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224582374|ref|YP_002636172.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238911333|ref|ZP_04655170.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|374978567|ref|ZP_09719909.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|375113462|ref|ZP_09758632.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|378444037|ref|YP_005231669.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378448881|ref|YP_005236240.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378698497|ref|YP_005180454.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378983142|ref|YP_005246297.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|378987939|ref|YP_005251103.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379699758|ref|YP_005241486.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383495343|ref|YP_005396032.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|409248984|ref|YP_006884821.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|421357672|ref|ZP_15807980.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421365334|ref|ZP_15815556.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421368891|ref|ZP_15819075.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421372340|ref|ZP_15822489.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421375950|ref|ZP_15826059.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421380522|ref|ZP_15830584.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421385971|ref|ZP_15835987.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421392385|ref|ZP_15842342.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421396099|ref|ZP_15846031.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421398756|ref|ZP_15848661.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421405061|ref|ZP_15854896.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421407663|ref|ZP_15857470.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421412003|ref|ZP_15861766.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421419352|ref|ZP_15869044.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421423972|ref|ZP_15873623.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421425728|ref|ZP_15875363.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421430073|ref|ZP_15879667.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421436902|ref|ZP_15886428.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421439275|ref|ZP_15888766.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421445950|ref|ZP_15895371.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421451097|ref|ZP_15900463.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|421884239|ref|ZP_16315454.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422024672|ref|ZP_16371149.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422029698|ref|ZP_16375953.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427545987|ref|ZP_18926463.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427562223|ref|ZP_18931226.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427580807|ref|ZP_18936049.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427602934|ref|ZP_18940824.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427627657|ref|ZP_18945736.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427650961|ref|ZP_18950491.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427659909|ref|ZP_18955447.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427665020|ref|ZP_18960192.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|427700860|ref|ZP_18965144.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|436707351|ref|ZP_20518603.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|436797095|ref|ZP_20523041.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436810693|ref|ZP_20529731.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436813561|ref|ZP_20531749.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436831285|ref|ZP_20535953.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436849875|ref|ZP_20541012.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436856288|ref|ZP_20545393.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436863273|ref|ZP_20549816.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436871749|ref|ZP_20554923.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436878902|ref|ZP_20559321.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436887016|ref|ZP_20563422.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436894318|ref|ZP_20567796.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436904444|ref|ZP_20574461.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436910080|ref|ZP_20576665.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436918333|ref|ZP_20581504.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436925448|ref|ZP_20585880.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436934372|ref|ZP_20590376.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436941200|ref|ZP_20594760.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436949190|ref|ZP_20599204.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436959759|ref|ZP_20603956.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436975025|ref|ZP_20611301.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436987284|ref|ZP_20615928.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436999822|ref|ZP_20620395.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437010139|ref|ZP_20624119.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437018063|ref|ZP_20626555.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437035651|ref|ZP_20633577.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437046499|ref|ZP_20638315.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437049250|ref|ZP_20639870.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437056937|ref|ZP_20644305.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437065389|ref|ZP_20649074.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437078832|ref|ZP_20656326.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437081856|ref|ZP_20657931.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437089880|ref|ZP_20662452.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437117255|ref|ZP_20669875.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437122452|ref|ZP_20672294.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437132552|ref|ZP_20678002.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437137659|ref|ZP_20680454.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437148972|ref|ZP_20687845.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437152070|ref|ZP_20689741.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437161017|ref|ZP_20695090.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437172875|ref|ZP_20701398.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437175355|ref|ZP_20702818.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437188339|ref|ZP_20710343.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437201147|ref|ZP_20711796.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437259799|ref|ZP_20717319.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437272811|ref|ZP_20724561.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437279181|ref|ZP_20727518.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437288448|ref|ZP_20730782.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437306917|ref|ZP_20734559.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437323656|ref|ZP_20739390.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437338327|ref|ZP_20743633.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437370524|ref|ZP_20749229.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437421767|ref|ZP_20755056.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437456365|ref|ZP_20760484.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437469912|ref|ZP_20764927.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437485370|ref|ZP_20769482.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437498954|ref|ZP_20773763.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437502455|ref|ZP_20774537.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437528684|ref|ZP_20780137.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437558041|ref|ZP_20785330.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437569191|ref|ZP_20787817.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437593166|ref|ZP_20795332.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437602273|ref|ZP_20798280.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437625451|ref|ZP_20805536.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437638451|ref|ZP_20807509.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437658385|ref|ZP_20811592.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437670670|ref|ZP_20815680.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437694697|ref|ZP_20821772.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437718071|ref|ZP_20828471.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437723537|ref|ZP_20829366.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437811699|ref|ZP_20841291.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437868275|ref|ZP_20848257.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438091359|ref|ZP_20860870.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438105690|ref|ZP_20866308.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438114367|ref|ZP_20869983.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|440762064|ref|ZP_20941129.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440768809|ref|ZP_20947773.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440772397|ref|ZP_20951302.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|445136689|ref|ZP_21383553.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445172421|ref|ZP_21396512.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445218538|ref|ZP_21402566.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445230753|ref|ZP_21405529.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445311497|ref|ZP_21411814.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|445324771|ref|ZP_21412334.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445343434|ref|ZP_21416903.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445354512|ref|ZP_21421411.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|21264009|sp|Q8ZR68.1|SYC_SALTY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|81309761|sp|Q57S29.1|SYC_SALCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710849|sp|B5EYD7.1|SYC_SALA4 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710851|sp|B5R6X0.1|SYC_SALG2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558784|sp|B5QUV0.1|SYC_SALEP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781692|sp|C0PVI8.1|SYC_SALPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|16419048|gb|AAL19491.1| cysteine tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|62126779|gb|AAX64482.1| cysteine tRNA synthetase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|194459160|gb|EDX47999.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197215107|gb|ACH52504.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205271619|emb|CAR36445.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205330830|gb|EDZ17594.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205333999|gb|EDZ20763.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205343946|gb|EDZ30710.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205349964|gb|EDZ36595.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206707818|emb|CAR32103.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224466901|gb|ACN44731.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261245816|emb|CBG23614.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992259|gb|ACY87144.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157145|emb|CBW16629.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911570|dbj|BAJ35544.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320084812|emb|CBY94602.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321226119|gb|EFX51170.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322713608|gb|EFZ05179.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|323128857|gb|ADX16287.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|332987486|gb|AEF06469.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379985953|emb|CCF87727.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|380462164|gb|AFD57567.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|395980845|gb|EJH90068.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395983186|gb|EJH92379.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395989909|gb|EJH99041.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395999990|gb|EJI09005.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396003177|gb|EJI12165.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|396003571|gb|EJI12558.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396007946|gb|EJI16881.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396011143|gb|EJI20054.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396015454|gb|EJI24336.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396024372|gb|EJI33158.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396029595|gb|EJI38331.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396030546|gb|EJI39280.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396035492|gb|EJI44164.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396036020|gb|EJI44691.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396044251|gb|EJI52848.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396052222|gb|EJI60730.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396056999|gb|EJI65472.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396057390|gb|EJI65862.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396063852|gb|EJI72240.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|396064385|gb|EJI72772.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396071481|gb|EJI79806.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|414023396|gb|EKT06830.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414023540|gb|EKT06968.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414025083|gb|EKT08423.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414037278|gb|EKT20062.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414038392|gb|EKT21103.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414042477|gb|EKT25015.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414051626|gb|EKT33715.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414053052|gb|EKT35070.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414057250|gb|EKT39009.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414061693|gb|EKT43076.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|414067187|gb|EKT47591.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|434961167|gb|ELL54485.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434965185|gb|ELL58148.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434975069|gb|ELL67379.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434982242|gb|ELL74065.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434988452|gb|ELL80051.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434991721|gb|ELL83209.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434992461|gb|ELL83914.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|434997800|gb|ELL89039.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435000964|gb|ELL92086.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|435007578|gb|ELL98431.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435011548|gb|ELM02268.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435016966|gb|ELM07474.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435018132|gb|ELM08607.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435028453|gb|ELM18532.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435031065|gb|ELM21054.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435039841|gb|ELM29610.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435041512|gb|ELM31254.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435045031|gb|ELM34676.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435049976|gb|ELM39481.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435053888|gb|ELM43324.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435054424|gb|ELM43859.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435059865|gb|ELM49140.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435060363|gb|ELM49633.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435067039|gb|ELM56110.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435075018|gb|ELM63841.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435077969|gb|ELM66713.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435081655|gb|ELM70296.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435096455|gb|ELM84727.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435096788|gb|ELM85050.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435100037|gb|ELM88228.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435101188|gb|ELM89342.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435111024|gb|ELM98929.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435113627|gb|ELN01473.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435114898|gb|ELN02688.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435122099|gb|ELN09621.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435123278|gb|ELN10771.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435130781|gb|ELN18009.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435134293|gb|ELN21421.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435143543|gb|ELN30409.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435143952|gb|ELN30806.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435146530|gb|ELN33323.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435156259|gb|ELN42761.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435157013|gb|ELN43480.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435165187|gb|ELN51247.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435168143|gb|ELN53996.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435171337|gb|ELN56973.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435183848|gb|ELN68809.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435186905|gb|ELN71718.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435194707|gb|ELN79135.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435196324|gb|ELN80667.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435200583|gb|ELN84568.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435206743|gb|ELN90245.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435207072|gb|ELN90564.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435214272|gb|ELN97095.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435214797|gb|ELN97545.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435216545|gb|ELN99020.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435223877|gb|ELO05861.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435237883|gb|ELO18538.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435240193|gb|ELO20613.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435246239|gb|ELO26257.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435250670|gb|ELO30390.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435252427|gb|ELO31977.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435253270|gb|ELO32758.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435259961|gb|ELO39174.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435270384|gb|ELO48880.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435278076|gb|ELO55951.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435278277|gb|ELO56148.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435280876|gb|ELO58561.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435283923|gb|ELO61437.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435293849|gb|ELO70512.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435298053|gb|ELO74310.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435315768|gb|ELO88988.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435321379|gb|ELO93794.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435328766|gb|ELP00224.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435335378|gb|ELP05624.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|436416249|gb|ELP14158.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|436418881|gb|ELP16762.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436424013|gb|ELP21801.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|444845036|gb|ELX70258.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444856300|gb|ELX81336.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444860528|gb|ELX85443.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444864127|gb|ELX88935.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444873428|gb|ELX97724.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|444881238|gb|ELY05282.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444882002|gb|ELY06002.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444887602|gb|ELY11295.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
Length = 461
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/485 (46%), Positives = 297/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGED----MTAANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V LQ +A ++ E + L I+ R ARK K++ +DA R LA +GI L D P
Sbjct: 398 PDVFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|385856089|ref|YP_005902602.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
gi|325205030|gb|ADZ00484.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
Length = 473
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/499 (42%), Positives = 290/499 (58%), Gaps = 48/499 (9%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ + H+D L L P +EP+ ++++P +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ NG AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR+V++ Y
Sbjct: 244 GASGHTCGHNHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDLE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y TL + A D
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA-------------EFDLS 350
Query: 421 TSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTI 480
+ N + F A+M+DD T +A L + +N + A L +
Sbjct: 351 ENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKT--------------NDAQLAGCL 396
Query: 481 RNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRK 540
+ + ++GL+ + L + + L+ +++ I R AR +K + +SD IR
Sbjct: 397 KALGGIIGLLQRDPTAFL----QGSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRD 452
Query: 541 DLAAVGIALMDSPVGTTWR 559
L I L D+ GTTWR
Sbjct: 453 LLNEHKIILEDNAGGTTWR 471
>gi|419173997|ref|ZP_13717852.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7B]
gi|378037315|gb|EHV99843.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7B]
Length = 461
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 295/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE+ ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGENFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|317047240|ref|YP_004114888.1| cysteinyl-tRNA synthetase [Pantoea sp. At-9b]
gi|316948857|gb|ADU68332.1| cysteinyl-tRNA synthetase [Pantoea sp. At-9b]
Length = 461
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/489 (43%), Positives = 287/489 (58%), Gaps = 36/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP G++GMYVCG+T YDL HIGH R +V FDV+ RYLR++GY++
Sbjct: 2 LKIYNTLTRQKEEFKPIHAGEIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYVGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +L+ R E H+D L LPP +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESIETLTNRMIGEMHKDFAALGILPPDLEPRATRHIDEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++++ G AY D GDV F V +YG LS + LE +AG RV V K+NP DF
Sbjct: 122 IELVGRLIERGHAYVADNGDVMFDVLSDKDYGVLSRQDLEQLQAGARVEVAEVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKMSKADEPAWNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY L A + +Y AL D +A+ +F F +M
Sbjct: 302 LNYGEDNLNQARAALERLY-------TALRHTDVSAV--------AAGGEEFEARFRTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L K + AL +R + VLG
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRLKTEDK--------TAADALAAKLRQLAEVLG------ 392
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIED----RTVARKNKEYEKSDAIRKDLAAVGIALM 550
+L Q E+ L+ D + IE R AR+ K++ ++D R L A+GI L
Sbjct: 393 --ILQQDPEQFLQSGAQANDDEVAEIEALIKMRNDARQAKDWAQADVARDKLNALGIVLE 450
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 451 DGPQGTTWR 459
>gi|397666931|ref|YP_006508468.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
gi|395130342|emb|CCD08580.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
Length = 456
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/490 (43%), Positives = 290/490 (59%), Gaps = 45/490 (9%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN+++RK+E GK+GMYVCG+T YD H+GHAR V FDV+ RYLR G++V
Sbjct: 2 LHLYNSLTRKKEPFISLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARA+E G L+ +Y + + D L+ LPP EPR + H+ I
Sbjct: 62 TYVRNITDIDDKIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I +I ++L+ G AY +GDV + VD FPEYG+LS + +E +G RV + K++P DF
Sbjct: 122 IRLIQRLLEKGNAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPGEPSWHSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +YW+H G + ++ EKM+KS+GNF+TI V++ +HP +R FL+ +HYRSP
Sbjct: 242 SEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSI--NKFHNDFLA 432
+NYS L +A + + +YQ + D +PP T S + F
Sbjct: 302 LNYSEENLLNAKKALIRLYQAVKD----------------VPPQTADSKLDEYWQEQFNQ 345
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M+DD +T V L+ L +N + AL T++N+ +LG
Sbjct: 346 AMNDDFNTPVALSILFQLAHEVNK--------------SNSPALAHTLKNLAGILG---- 387
Query: 493 GYSEVLLQLREKALKRADLTEDQVL---QRIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LQ ++ ++ L E++ L Q I +R AR + + K+D IR DL + GI L
Sbjct: 388 -----FLQKDPESFLQSGLAEEEKLVIEQLIAERLQARAERNWAKADQIRADLLSKGIEL 442
Query: 550 MDSPVGTTWR 559
D GTTWR
Sbjct: 443 EDGATGTTWR 452
>gi|423119049|ref|ZP_17106733.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
gi|376399695|gb|EHT12309.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
Length = 461
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/486 (46%), Positives = 298/486 (61%), Gaps = 30/486 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V+FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H D L+ L P +EPR + H+P I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHNDFDALNILRPDMEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV FSV P YGQLS + L+ +AG RV V K+NP DF
Sbjct: 122 IEITEQLIARGHAYVADNGDVMFSVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGNGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K S+ P + F F+ +M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDK------------SVEP---AGGDAFEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L + + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KTEDVAAANAMAAHMRKLSGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+V LQ + +AD E ++R I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PDVFLQ----SGAQADDGEVAEIERLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGP 453
Query: 554 VGTTWR 559
GTTWR
Sbjct: 454 QGTTWR 459
>gi|365157349|ref|ZP_09353622.1| cysteinyl-tRNA synthetase [Bacillus smithii 7_3_47FAA]
gi|363625250|gb|EHL76292.1| cysteinyl-tRNA synthetase [Bacillus smithii 7_3_47FAA]
Length = 465
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/486 (42%), Positives = 294/486 (60%), Gaps = 31/486 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++R++E P EGKV MYVCG T Y+ HIG+AR + FD + RYL GY+V Y
Sbjct: 5 LYNTLTRRKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEFRGYDVQY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDK+I A ELGED +L+ R+ + +D+ L C + PRV+++M II+
Sbjct: 65 VSNFTDVDDKLIRAARELGEDVPTLANRFIRAYFEDVEALGCKRADIHPRVTENMDIIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I + + G+AY VDGDVY+ KF +YG+LS + +++ + G R+ V +K++ DFALW
Sbjct: 125 FIRTLEEKGYAYEVDGDVYYRTRKFKDYGKLSHQSIDELKVGARIEVGEKKEDALDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AKEGE W+SPWG GRPGWHIECSAM+ YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KAAKEGEISWDSPWGKGRPGWHIECSAMARHYLGDTIDIHAGGQDLTFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+HNG++ I++EKMSKSLGNF + +++ + P ALR F++ HYR PINY
Sbjct: 245 LSGKTFARYWMHNGYININNEKMSKSLGNFVLVHDIIQKHDPDALRFFMLSVHYRHPINY 304
Query: 378 SVVQLESAS---ERIFYIYQTL-HDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
S LE+A ER+ YQ L H E + +L + + + I K H++F+
Sbjct: 305 SEELLENAKTSLERLKTSYQNLKHRKEASTNLTEN-------DHEWIEKIQKLHDEFVKE 357
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T ++ L + + N L + ++ ++A K ++ +VLGL
Sbjct: 358 MDDDFNTANAISVLFELSRQANYYLMEKHTSEKV-----ISAFMKEFEDLFSVLGL---- 408
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L+ + ++++ Q IE R ARK + ++ +D IR L + I L D+P
Sbjct: 409 -----------KLEVNEWLDEEIEQLIEKRNQARKERNFQLADEIRDQLKNMNIILEDTP 457
Query: 554 VGTTWR 559
GT W+
Sbjct: 458 QGTRWK 463
>gi|170683319|ref|YP_001742670.1| cysteinyl-tRNA synthetase [Escherichia coli SMS-3-5]
gi|222155312|ref|YP_002555451.1| Cysteinyl-tRNA synthetase [Escherichia coli LF82]
gi|331645713|ref|ZP_08346816.1| cysteine--tRNA ligase [Escherichia coli M605]
gi|366161381|ref|ZP_09461243.1| cysteinyl-tRNA synthetase [Escherichia sp. TW09308]
gi|386618953|ref|YP_006138533.1| cysteinyl-tRNA synthetase [Escherichia coli NA114]
gi|387615841|ref|YP_006118863.1| cysteinyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|387828542|ref|YP_003348479.1| cysteinyl-tRNA synthetase [Escherichia coli SE15]
gi|417661098|ref|ZP_12310679.1| cysteinyl-tRNA synthetase [Escherichia coli AA86]
gi|432371305|ref|ZP_19614366.1| cysteinyl-tRNA synthetase [Escherichia coli KTE11]
gi|432380152|ref|ZP_19623115.1| cysteinyl-tRNA synthetase [Escherichia coli KTE15]
gi|432385981|ref|ZP_19628879.1| cysteinyl-tRNA synthetase [Escherichia coli KTE16]
gi|432405395|ref|ZP_19648117.1| cysteinyl-tRNA synthetase [Escherichia coli KTE28]
gi|432420637|ref|ZP_19663193.1| cysteinyl-tRNA synthetase [Escherichia coli KTE178]
gi|432498773|ref|ZP_19740551.1| cysteinyl-tRNA synthetase [Escherichia coli KTE216]
gi|432512732|ref|ZP_19749974.1| cysteinyl-tRNA synthetase [Escherichia coli KTE224]
gi|432557544|ref|ZP_19794235.1| cysteinyl-tRNA synthetase [Escherichia coli KTE49]
gi|432610258|ref|ZP_19846430.1| cysteinyl-tRNA synthetase [Escherichia coli KTE72]
gi|432615307|ref|ZP_19851439.1| cysteinyl-tRNA synthetase [Escherichia coli KTE75]
gi|432644949|ref|ZP_19880751.1| cysteinyl-tRNA synthetase [Escherichia coli KTE86]
gi|432654534|ref|ZP_19890252.1| cysteinyl-tRNA synthetase [Escherichia coli KTE93]
gi|432693314|ref|ZP_19928526.1| cysteinyl-tRNA synthetase [Escherichia coli KTE162]
gi|432697840|ref|ZP_19933012.1| cysteinyl-tRNA synthetase [Escherichia coli KTE169]
gi|432709359|ref|ZP_19944426.1| cysteinyl-tRNA synthetase [Escherichia coli KTE6]
gi|432744461|ref|ZP_19979165.1| cysteinyl-tRNA synthetase [Escherichia coli KTE43]
gi|432893189|ref|ZP_20105246.1| cysteinyl-tRNA synthetase [Escherichia coli KTE165]
gi|432902919|ref|ZP_20112536.1| cysteinyl-tRNA synthetase [Escherichia coli KTE194]
gi|432917706|ref|ZP_20122189.1| cysteinyl-tRNA synthetase [Escherichia coli KTE173]
gi|432925011|ref|ZP_20127102.1| cysteinyl-tRNA synthetase [Escherichia coli KTE175]
gi|432942407|ref|ZP_20139728.1| cysteinyl-tRNA synthetase [Escherichia coli KTE183]
gi|432980032|ref|ZP_20168811.1| cysteinyl-tRNA synthetase [Escherichia coli KTE211]
gi|432984216|ref|ZP_20172954.1| cysteinyl-tRNA synthetase [Escherichia coli KTE215]
gi|433037519|ref|ZP_20225136.1| cysteinyl-tRNA synthetase [Escherichia coli KTE113]
gi|433095455|ref|ZP_20281668.1| cysteinyl-tRNA synthetase [Escherichia coli KTE139]
gi|433100097|ref|ZP_20286207.1| cysteinyl-tRNA synthetase [Escherichia coli KTE145]
gi|433104663|ref|ZP_20290685.1| cysteinyl-tRNA synthetase [Escherichia coli KTE148]
gi|433143087|ref|ZP_20328265.1| cysteinyl-tRNA synthetase [Escherichia coli KTE168]
gi|433187320|ref|ZP_20371448.1| cysteinyl-tRNA synthetase [Escherichia coli KTE88]
gi|226735059|sp|B1LKE5.1|SYC_ECOSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|170521037|gb|ACB19215.1| cysteinyl tRNA synthetase [Escherichia coli SMS-3-5]
gi|222032317|emb|CAP75056.1| Cysteinyl-tRNA synthetase [Escherichia coli LF82]
gi|281177699|dbj|BAI54029.1| cysteinyl-tRNA synthetase [Escherichia coli SE15]
gi|312945102|gb|ADR25929.1| cysteinyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|330910316|gb|EGH38826.1| cysteinyl-tRNA synthetase [Escherichia coli AA86]
gi|331044465|gb|EGI16592.1| cysteine--tRNA ligase [Escherichia coli M605]
gi|333969454|gb|AEG36259.1| Cysteinyl-tRNA synthetase [Escherichia coli NA114]
gi|430899908|gb|ELC21986.1| cysteinyl-tRNA synthetase [Escherichia coli KTE11]
gi|430909487|gb|ELC30853.1| cysteinyl-tRNA synthetase [Escherichia coli KTE16]
gi|430911860|gb|ELC33128.1| cysteinyl-tRNA synthetase [Escherichia coli KTE15]
gi|430932312|gb|ELC52735.1| cysteinyl-tRNA synthetase [Escherichia coli KTE28]
gi|430947109|gb|ELC66816.1| cysteinyl-tRNA synthetase [Escherichia coli KTE178]
gi|431031922|gb|ELD44646.1| cysteinyl-tRNA synthetase [Escherichia coli KTE216]
gi|431044685|gb|ELD54945.1| cysteinyl-tRNA synthetase [Escherichia coli KTE224]
gi|431094220|gb|ELD99866.1| cysteinyl-tRNA synthetase [Escherichia coli KTE49]
gi|431151076|gb|ELE52111.1| cysteinyl-tRNA synthetase [Escherichia coli KTE72]
gi|431157494|gb|ELE58133.1| cysteinyl-tRNA synthetase [Escherichia coli KTE75]
gi|431184199|gb|ELE83964.1| cysteinyl-tRNA synthetase [Escherichia coli KTE86]
gi|431195273|gb|ELE94471.1| cysteinyl-tRNA synthetase [Escherichia coli KTE93]
gi|431236551|gb|ELF31756.1| cysteinyl-tRNA synthetase [Escherichia coli KTE162]
gi|431247034|gb|ELF41277.1| cysteinyl-tRNA synthetase [Escherichia coli KTE169]
gi|431251528|gb|ELF45535.1| cysteinyl-tRNA synthetase [Escherichia coli KTE6]
gi|431295558|gb|ELF85297.1| cysteinyl-tRNA synthetase [Escherichia coli KTE43]
gi|431425080|gb|ELH07154.1| cysteinyl-tRNA synthetase [Escherichia coli KTE165]
gi|431436449|gb|ELH17964.1| cysteinyl-tRNA synthetase [Escherichia coli KTE194]
gi|431446580|gb|ELH27324.1| cysteinyl-tRNA synthetase [Escherichia coli KTE173]
gi|431448483|gb|ELH29198.1| cysteinyl-tRNA synthetase [Escherichia coli KTE175]
gi|431453958|gb|ELH34337.1| cysteinyl-tRNA synthetase [Escherichia coli KTE183]
gi|431494027|gb|ELH73617.1| cysteinyl-tRNA synthetase [Escherichia coli KTE211]
gi|431505959|gb|ELH84563.1| cysteinyl-tRNA synthetase [Escherichia coli KTE215]
gi|431555054|gb|ELI28912.1| cysteinyl-tRNA synthetase [Escherichia coli KTE113]
gi|431619511|gb|ELI88431.1| cysteinyl-tRNA synthetase [Escherichia coli KTE139]
gi|431622220|gb|ELI91001.1| cysteinyl-tRNA synthetase [Escherichia coli KTE145]
gi|431634346|gb|ELJ02593.1| cysteinyl-tRNA synthetase [Escherichia coli KTE148]
gi|431666454|gb|ELJ33088.1| cysteinyl-tRNA synthetase [Escherichia coli KTE168]
gi|431709673|gb|ELJ74126.1| cysteinyl-tRNA synthetase [Escherichia coli KTE88]
Length = 461
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 295/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|416069686|ref|ZP_11583362.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|347999795|gb|EGY40610.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
Length = 469
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/490 (45%), Positives = 290/490 (59%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NT++R++E+ KP GK+GMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E ++D L+ L P EPR + H+P I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID++ +++ G AY D GDV F V+ F +YG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 132 IDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H+G + +D EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +K+ D+ F +M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGIDKSAVAFGGENFVDA---------------FREAM 356
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T L+ L + + +N L K A RL LAA +LG
Sbjct: 357 DDDFNTPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAA----------ILG---- 402
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LLQL + +A ED+V + I+ R AR K++ +DA R +GI L
Sbjct: 403 -----LLQLDPEQFLQAGSDEDEVAKIEALIKQRNEARTAKDWAAADAARNASTKMGIIL 457
Query: 550 MDSPVGTTWR 559
D P GTTWR
Sbjct: 458 EDGPNGTTWR 467
>gi|270263639|ref|ZP_06191908.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
gi|270042523|gb|EFA15618.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
Length = 461
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/485 (46%), Positives = 286/485 (58%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE L+ R E H D L P EPR + H+ I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++D AY +GDV FS+D P+YG LS + L+ +AG RV +D K+NP DF
Sbjct: 122 IEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W+SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA A F F +M
Sbjct: 302 LNYSEENLKQARTALERLY-------TALRGTDANA--------QPAGGEAFEARFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D + +N L KG+ A + L +R + VLGL+
Sbjct: 347 DDDFNTPEAYSALFDLAREVNRL----KGEDMA----AANGLAAELRKLAKVLGLLQQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A ++ E + L I+ R ARK K++ +DA R L + I L D P
Sbjct: 398 PEQFLQSGAQA-DDGEVAEIEAL--IKQRNDARKAKDWALADAARDRLNEMSIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|449472388|ref|XP_004153579.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 465
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/488 (44%), Positives = 295/488 (60%), Gaps = 28/488 (5%)
Query: 73 STQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLG 132
S+ L ++NTM+R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LG
Sbjct: 3 SSMLKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLG 62
Query: 133 YEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHM 192
Y + YVRN TD+DDKII RANE GE ++L R E H+D L+ L P EPR + H+
Sbjct: 63 YNLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHI 122
Query: 193 PHIIDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNP 251
II++ ++++ G AY D GDV FSV P YG LS + L+ +AG RV V K+NP
Sbjct: 123 HEIIEITQKLIERGHAYVADNGDVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRNP 182
Query: 252 ADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
DF LWK +K GEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENE
Sbjct: 183 MDFVLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENE 242
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HY
Sbjct: 243 IAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHY 302
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RS +NYS L+ A + +Y L ++++ A F F+
Sbjct: 303 RSQLNYSEENLKQARAALERLYTALRGTDRSVPAAGGEA---------------FEARFV 347
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
M+DD +T + L D + +N L ++ + + AL +R + +VLGL+
Sbjct: 348 EVMNDDFNTPEAYSVLFDMAREVNRL--------KSEDMAAANALASHLRKLSSVLGLLE 399
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+V LQ +A ++ E + L I+ R AR+ K++ +DA R L +GI L D
Sbjct: 400 Q-EPDVFLQSGAQA-DDGEVAEIEAL--IKARLEARQAKDWAAADAARNRLTEMGIILED 455
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 456 GPQGTTWR 463
>gi|291613145|ref|YP_003523302.1| cysteinyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
gi|291583257|gb|ADE10915.1| cysteinyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
Length = 491
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/506 (43%), Positives = 305/506 (60%), Gaps = 36/506 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R ++ KP + V MYVCG+T YD H+GHARV V FD++YR+L+ GY+V
Sbjct: 2 LKIYNTLARDKQEFKPIIPNTVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWLKASGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E +L++R+ + H+D L P EPR + ++P +
Sbjct: 62 TYVRNITDIDDKIIKRAAENKESIHALTQRFIDAMHEDADTLGVQRPDHEPRATQYVPQM 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
++M+ Q+ NG AY+ DGDV ++V KF YG+LSG+ LED RAGERV V S K +P DF
Sbjct: 122 LEMVAQLEQNGLAYQAADGDVNYAVRKFDGYGKLSGKSLEDLRAGERVEVVSDKHDPLDF 181
Query: 255 ALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AK+GE W+S WG GRPGWH+ECSAM++ LG+ FDIHGGG DL FPHHENE
Sbjct: 182 VLWKHAKDGEADEVKWDSKWGKGRPGWHLECSAMASDILGNHFDIHGGGADLQFPHHENE 241
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A +++YW+HNGFV +D+EKMSKSLGNFFTIR+V++ Y +R F++ HY
Sbjct: 242 IAQSEGAHRCQYVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLKKYDAEVVRFFILRAHY 301
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPP--------DTVTSI 423
RSP+NYS V L+ A + +Y L + S+L P + V
Sbjct: 302 RSPLNYSDVHLDDAKGALTRLYTALKSAPSS-SILPPEGEGSEFPSPSGRGARGEGVIDW 360
Query: 424 NKFH-NDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRN 482
+ H F ++M DD +T +A L D +N R +S+ A + ++
Sbjct: 361 DTPHAARFKSAMDDDFNTPEAIAVLFDLANEVN-------------RSQSVTAAAE-LKT 406
Query: 483 VLTVLGLMS-------TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKS 535
+ VLGL+ G + + L + L+ + D + IE R A+K+K + ++
Sbjct: 407 LAGVLGLLQRDPQDFLQGRASMNLTVPTPTLEASGGALD-IDALIEARIAAKKSKNFAEA 465
Query: 536 DAIRKDLAAVGIALMDSPVGTTWRPA 561
D IRK+L GI L D+P GTTWR A
Sbjct: 466 DRIRKELLGAGIVLEDTPQGTTWRRA 491
>gi|148244266|ref|YP_001218960.1| cysteinyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
gi|146326093|dbj|BAF61236.1| cysteinyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
Length = 462
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/486 (44%), Positives = 295/486 (60%), Gaps = 29/486 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+++E+ P KVG+YVCG+T YD H+GHARV V FDV+ R+LR V
Sbjct: 2 LKIYNTLSKQKEIFHPINNNKVGIYVCGMTVYDYCHMGHARVLVMFDVITRHLRRHFSNV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E ED +L+ R+ H+D L LPP VEPR ++ M I
Sbjct: 62 EYVRNITDIDDKIIKRAVENKEDIYTLTNRFINAMHEDEHALGILPPDVEPRATNTMEQI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI +++ GFAY+ +GDVY+SV F YG+ S + L G R+ V+S KK+P DF
Sbjct: 122 FCMIKSLIEKGFAYQAHNGDVYYSVRHFKNYGKFSRKNLNKLEIGARIKVESAKKDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W SPWG GRPGWHIECSAMS +LG+ FDIHGGGMDL FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWSSPWGKGRPGWHIECSAMSTHHLGNHFDIHGGGMDLTFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A N + ++ W+H GFV I+++KMSKSL NFFTIR V++ Y+ LR F++ +HY SP
Sbjct: 242 SEGANNCTFVNIWMHVGFVNINNKKMSKSLNNFFTIRNVLKNYNGEILRYFIMSSHYHSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+N+S L A + +Y T+ + L+ + + SI D N+ ++
Sbjct: 302 LNFSDENLNKAKSSLSRLYTTI----RGLNTSNVRTEEISIHFDYSVRFNE-------AL 350
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L+ L + K +N ++ E+ KT+ +L LG GY
Sbjct: 351 DDDFNTPIALSVLFELAKIVN------------IQRENNTDQAKTLAQLLKKLG----GY 394
Query: 495 SEVLLQLREKALKRA-DLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+L +K LK+ L+++Q+ +I +R AR NK++ SD IR +LA I L D+
Sbjct: 395 IGILQMNADKFLKQGISLSDEQINIKITNRNKARINKDFTLSDYIRDELAKFDIILEDNI 454
Query: 554 VGTTWR 559
GTTWR
Sbjct: 455 NGTTWR 460
>gi|118595239|ref|ZP_01552586.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
gi|118441017|gb|EAV47644.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
Length = 456
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/483 (43%), Positives = 296/483 (61%), Gaps = 33/483 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
L+N++S+K+E+ K V G+V MYVCG+T YD H+GHARV + FD++YR+ + GYEV Y
Sbjct: 4 LFNSLSKKKEIFKSIVPGQVKMYVCGMTVYDFCHLGHARVLIVFDLIYRWFKASGYEVTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RA E G L++++ +E + D L + P EP+ ++ + +I
Sbjct: 64 VRNITDIDDKIITRAAEQGVTYGVLTKQFIDEMNADAEALGVISPDAEPKATESIDAMII 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI +++ G+AY + DV+++V KF YG+LSG+ LED RAG RV VD KKN DF L
Sbjct: 124 MIQGLIEKGYAYVGSNNDVFYAVSKFNGYGKLSGKSLEDLRAGNRVEVDKFKKNSFDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WKSAK GEP W SPWG GRPGWHIECSAMS +LG +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKSAKPGEPCWNSPWGKGRPGWHIECSAMSNKFLGKNFDIHGGGQDLQFPHHENEIAQSE 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A +YW+HNGFV +D+EKMSKSLGNFFTIR+++ Y P +R F++ YRSP+N
Sbjct: 244 AFNGCQMANYWLHNGFVKVDNEKMSKSLGNFFTIREILNHYEPEIVRFFVLKAQYRSPLN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS LE A + + +Y + D+ + N F + F ++ D
Sbjct: 304 YSDTHLEDAKQGLTRLYLAIRG-------------NDTRIDQEIDWKNNFASQFKDALDD 350
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T+ ++ L N++ + + +++ + ++ + N+L +L + E
Sbjct: 351 DFNTSEAISIL---FSLANEVNKSNQDQEKQLLIQ--------LANILGILEMD----PE 395
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
+ L+ +K +D D L I DR A+KNK+Y+K+D IR L I L D+P GT
Sbjct: 396 LFLR---GNIKSSDNDIDIDL-LISDRLSAKKNKDYQKADEIRIFLEGHDILLEDTPNGT 451
Query: 557 TWR 559
WR
Sbjct: 452 IWR 454
>gi|161504307|ref|YP_001571419.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|187631629|sp|A9MLA7.1|SYC_SALAR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160865654|gb|ABX22277.1| hypothetical protein SARI_02415 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 461
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IEITRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L ++ + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KSEDMTAANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LQ +A ++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PDAFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|440737636|ref|ZP_20917198.1| cysteinyl-tRNA ligase [Pseudomonas fluorescens BRIP34879]
gi|440381844|gb|ELQ18359.1| cysteinyl-tRNA ligase [Pseudomonas fluorescens BRIP34879]
Length = 460
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 284/489 (58%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD HIGH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R H+D L+ L P +EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIAAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+ K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKATKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P + F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPAVAPAGGDTFVARFTEVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L T A RL+ LA+ VL VL + +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRETDLDAAAGLAARLKELAS-------VLGVLQMEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L+ A R D E L I+ R AR K++ +SD IR L A+G+ L D
Sbjct: 399 NF------LQAGAEGRVDAAEVDAL--IQARLAARAGKDWAESDRIRDQLTAMGVVLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|375122626|ref|ZP_09767790.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|326626876|gb|EGE33219.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
Length = 461
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/485 (46%), Positives = 297/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAEIVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGED----MTAANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V LQ +A ++ E + L I+ R ARK K++ +DA R LA +GI L D P
Sbjct: 398 PDVFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|424815404|ref|ZP_18240555.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ECD227]
gi|325496424|gb|EGC94283.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ECD227]
Length = 461
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNQMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|300704462|ref|YP_003746065.1| cysteine tRNA synthetase [Ralstonia solanacearum CFBP2957]
gi|299072126|emb|CBJ43458.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
solanacearum CFBP2957]
Length = 465
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/491 (44%), Positives = 294/491 (59%), Gaps = 34/491 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R+++ P G+V MYVCG+T YD H+GHARV V FD++ R+LR GY V
Sbjct: 4 LKIYNTLAREKQTFVPIESGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASGYGV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R+ H+D L P EPR ++++P +
Sbjct: 64 TYVRNITDIDDKIIKRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYVPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++ NG AY+ DGDV ++V KF YG+LSG+ LED RAGERVA + K++P DF
Sbjct: 124 LSMIGKLQANGLAYQAADGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDAKQDPLDF 183
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWKSAK EP W SPWG GRPGWHIECSAMS LG FD+HGGG DL FPHHENE
Sbjct: 184 VLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQ+ A N+ ++ W+HNGFV ++ EKMSKSLGNFFTIR+V+++Y P +R F++ +HY
Sbjct: 244 IAQAEGANGNTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILRSHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RS +NYS L+ A + +Y L D A+ PD S + F
Sbjct: 304 RSDLNYSDAHLDDARHALTRLYTALKDVPAAV----------GAKPDWSESHGQ---RFR 350
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
+M+DD +T V +A L + +N R +LA+ + V+ +LG
Sbjct: 351 EAMNDDFNTPVAMAVLFELASEVNK-----------TRSAALASQLAALGGVMGLLGRDP 399
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ + + L A +V RIE R VA+ +++ ++D IR DL A GI L D
Sbjct: 400 HAFLQGGVGAAADGLDTA-----EVEARIEARRVAKAARDFARADGIRADLLAAGIVLED 454
Query: 552 SPVGTT-WRPA 561
P G T WR A
Sbjct: 455 KPGGVTEWRRA 465
>gi|432945216|ref|ZP_20141490.1| cysteinyl-tRNA synthetase [Escherichia coli KTE196]
gi|433042019|ref|ZP_20229550.1| cysteinyl-tRNA synthetase [Escherichia coli KTE117]
gi|431462670|gb|ELH42878.1| cysteinyl-tRNA synthetase [Escherichia coli KTE196]
gi|431559940|gb|ELI33471.1| cysteinyl-tRNA synthetase [Escherichia coli KTE117]
Length = 461
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 295/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKSVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|373106799|ref|ZP_09521099.1| cysteine-tRNA ligase [Stomatobaculum longum]
gi|371651738|gb|EHO17164.1| cysteine-tRNA ligase [Stomatobaculum longum]
Length = 469
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/491 (43%), Positives = 292/491 (59%), Gaps = 31/491 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+Y+TM+R +E + GKV MYVCG T Y+L HIG+AR + FD + RYL + GYEV +
Sbjct: 3 IYDTMTRYKEEFRTIEPGKVRMYVCGPTVYNLIHIGNARPMIFFDTVRRYLEYKGYEVNF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDKII ANE G D +S RY E +DM ++ P S PR ++ +P +I+
Sbjct: 63 VSNFTDVDDKIIKAANEEGVDASVISERYIVECKKDMAGMNVRPASYNPRATEEIPGMIE 122
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGER---VAVDSRKKNPAD 253
MI +++D G AY DG VY+ V+ FP+YG+LS + +E+N+AG R V + K++P D
Sbjct: 123 MIQKLIDGGHAYVAADGTVYYRVESFPDYGKLSHKNVEENQAGLRTLKVRGEEAKEDPND 182
Query: 254 FALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIA 313
F LWK KEGEP+WESPW GRPGWHIECS MS YLG + DIHGGG DLVFPHHENEIA
Sbjct: 183 FVLWKPKKEGEPYWESPWCEGRPGWHIECSVMSKKYLGETIDIHGGGEDLVFPHHENEIA 242
Query: 314 QSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
QS A + YW+HN F+ ID+ KMSKSLGNF T+RQ+ E Y LR F++ HYRS
Sbjct: 243 QSEAVSGKKFVRYWMHNAFLNIDNVKMSKSLGNFKTVRQISEEYDLQVLRFFMLSAHYRS 302
Query: 374 PINYSVVQLESAS---ERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDF 430
P+N+S ++ A +RI + L DC L+ A AL + + + + + F
Sbjct: 303 PLNFSREMMDGAKASLDRILTAMEHLRDC---LAAAKAEALTGA-EEEELAAFDALREKF 358
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
A+M DD +T ++ + + +K N + K R++ L + +L VLGL+
Sbjct: 359 EAAMDDDFNTADAISVIFEMVKRANITVTEESSKAYITRVKEL------LDKLLDVLGLL 412
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
S E L R +AL I +R ARK K + ++D IR +L +GI L
Sbjct: 413 SERKEEN-LDARVEAL-------------IAERQTARKEKNFARADEIRNELTEMGILLE 458
Query: 551 DSPVGTTWRPA 561
D+ G W+ A
Sbjct: 459 DTKEGVKWKRA 469
>gi|417363990|ref|ZP_12137052.1| Cysteinyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|353598700|gb|EHC55077.1| Cysteinyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
Length = 459
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/483 (46%), Positives = 296/483 (61%), Gaps = 28/483 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++ Y
Sbjct: 2 IFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKY 61
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ II+
Sbjct: 62 VRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEIIE 121
Query: 198 MITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
+ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF L
Sbjct: 122 LTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDFVL 181
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQS
Sbjct: 182 WKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQST 241
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS +N
Sbjct: 242 CAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLN 301
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS L+ A + +Y L +K+ + A F F+ +M+D
Sbjct: 302 YSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAMND 346
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T + L D + +N L KG+ + + A+ +R + VLGL+ +
Sbjct: 347 DFNTPEAYSVLFDMAREVNRL----KGED----MTAANAMASHLRKISGVLGLLEQ-EPD 397
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
V LQ +A ++ E + L I+ R ARK K++ +DA R LA +GI L D P GT
Sbjct: 398 VFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQGT 454
Query: 557 TWR 559
TWR
Sbjct: 455 TWR 457
>gi|271501481|ref|YP_003334507.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech586]
gi|270345036|gb|ACZ77801.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech586]
Length = 461
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/486 (44%), Positives = 290/486 (59%), Gaps = 30/486 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY+V
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE L+ R +E H D L+ L P EPR + ++ I
Sbjct: 62 KYVRNITDIDDKIIRRATENGETIEQLTNRMIDEMHTDFRALNILSPDEEPRATHYIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ AY D GDV FSVD P YG LS + LE +AG RV + K+NP DF
Sbjct: 122 IELVEKLIARRHAYVADNGDVMFSVDTAPGYGVLSRQDLEQLKAGARVEITEVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A +++YW+H+G V +D EKMSKSL NFFT+R V+ Y +R FLI HYRS
Sbjct: 242 STCAHGGDYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLSHYDAETIRYFLISGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + +Y L + ++ A F + F +M
Sbjct: 302 LNYTEENLKQARASLERLYTALRGTDASVPAAGGEA---------------FEHRFRDAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + L +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KADDAAAASGLASALRQLAGVLGLLEHD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E+ LQ + +AD +E Q ++ I+ R AR++K++ +DA R L +GI L D P
Sbjct: 398 PELFLQ----SGAQADDSEVQEIEALIKQRNDARQSKDWALADAARNRLTEMGIVLEDGP 453
Query: 554 VGTTWR 559
GTTWR
Sbjct: 454 QGTTWR 459
>gi|429744209|ref|ZP_19277714.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 020 str. F0370]
gi|429163425|gb|EKY05652.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 020 str. F0370]
Length = 473
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/501 (43%), Positives = 289/501 (57%), Gaps = 52/501 (10%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LR GY + Y
Sbjct: 4 LYNTLTRQKEAFSPIDPANVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ H+D L L P +EP+ ++++ +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIGDLTARFIAAMHEDADALGVLRPDLEPKATENIAEMIA 123
Query: 198 MITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ AY +GDVY++V +F YGQLSG+ L+D RAGERV VD K++P DF L
Sbjct: 124 MIENLIARDKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK+AK GEP WESPWG GRPGWHIECSAMS G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSEKLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 317 AACNN----------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPL 360
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR V++ Y P
Sbjct: 244 GASGHACGHDHAVTHHGKPVASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLKQYDPE 303
Query: 361 ALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTV 420
+R F++ HYRSP+NYS L+ A + +Y ALK + P +
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLY---------------TALKHTPPAEFA 348
Query: 421 TS--INKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEK 478
S N + F A+M+DD T +A L + +N K Q+ A L
Sbjct: 349 LSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVN--------KTQS------AELAG 394
Query: 479 TIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAI 538
++ + ++GL+ +E L + L+ ++V I R AR +K + +SD I
Sbjct: 395 CLKALGGIIGLLQRDPTEFL----QGGAVADGLSNEEVEALIAQRKQARADKNWAESDRI 450
Query: 539 RKDLAAVGIALMDSPVGTTWR 559
R L A I L D GT+WR
Sbjct: 451 RDLLTAQNIILEDGAGGTSWR 471
>gi|421782075|ref|ZP_16218534.1| cysteine--tRNA ligase [Serratia plymuthica A30]
gi|407755631|gb|EKF65755.1| cysteine--tRNA ligase [Serratia plymuthica A30]
Length = 461
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/485 (46%), Positives = 286/485 (58%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE L+ R E H D L P EPR + H+ I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++D AY +GDV FS+D P+YG LS + L+ +AG RV +D K+NP DF
Sbjct: 122 IEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W+SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA A F F +M
Sbjct: 302 LNYSEENLKQARTALERLY-------TALRGTDANA--------QPAGGEAFEARFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D + +N L KG+ A + L +R + VLGL+
Sbjct: 347 DDDFNTPEAYSALFDLARDVNRL----KGEDMA----AANGLAAELRKLAKVLGLLQQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A ++ E + L I+ R ARK K++ +DA R L + I L D P
Sbjct: 398 PEQFLQSGAQA-DDGEVAEIEAL--IKQRNDARKAKDWALADAARDRLNEMNIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|378956076|ref|YP_005213563.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|438120779|ref|ZP_20872025.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|357206687|gb|AET54733.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|434943402|gb|ELL49529.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
Length = 461
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/485 (46%), Positives = 297/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGED----MTASNAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V LQ +A ++ E + L I+ R ARK K++ +DA R LA +GI L D P
Sbjct: 398 PDVFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|301648555|ref|ZP_07248272.1| cysteinyl-tRNA synthetase [Escherichia coli MS 146-1]
gi|331641048|ref|ZP_08342183.1| cysteine--tRNA ligase [Escherichia coli H736]
gi|386279546|ref|ZP_10057227.1| cysteinyl-tRNA synthetase [Escherichia sp. 4_1_40B]
gi|386703743|ref|YP_006167590.1| cysteinyl-tRNA synthetase [Escherichia coli P12b]
gi|415777054|ref|ZP_11488306.1| cysteinyl-tRNA synthetase [Escherichia coli 3431]
gi|417260547|ref|ZP_12048045.1| cysteine--tRNA ligase [Escherichia coli 2.3916]
gi|417270680|ref|ZP_12058033.1| cysteine--tRNA ligase [Escherichia coli 2.4168]
gi|417275430|ref|ZP_12062767.1| cysteine--tRNA ligase [Escherichia coli 3.2303]
gi|417633016|ref|ZP_12283236.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_S1191]
gi|418301374|ref|ZP_12913168.1| cysteinyl-tRNA synthetase [Escherichia coli UMNF18]
gi|419141063|ref|ZP_13685819.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6A]
gi|419146464|ref|ZP_13691160.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6B]
gi|419152376|ref|ZP_13696963.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6C]
gi|419157860|ref|ZP_13702384.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6D]
gi|419162789|ref|ZP_13707268.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6E]
gi|419812720|ref|ZP_14337583.1| cysteinyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
gi|422791338|ref|ZP_16844041.1| cysteinyl-tRNA synthetase [Escherichia coli TA007]
gi|422816537|ref|ZP_16864752.1| cysteinyl-tRNA synthetase [Escherichia coli M919]
gi|425113893|ref|ZP_18515724.1| cysteine--tRNA ligase [Escherichia coli 8.0566]
gi|425118657|ref|ZP_18520387.1| cysteine--tRNA ligase [Escherichia coli 8.0569]
gi|425271229|ref|ZP_18662737.1| cysteine--tRNA ligase [Escherichia coli TW15901]
gi|425281903|ref|ZP_18673019.1| cysteine--tRNA ligase [Escherichia coli TW00353]
gi|432415475|ref|ZP_19658106.1| cysteinyl-tRNA synthetase [Escherichia coli KTE44]
gi|432626107|ref|ZP_19862092.1| cysteinyl-tRNA synthetase [Escherichia coli KTE77]
gi|432635837|ref|ZP_19871723.1| cysteinyl-tRNA synthetase [Escherichia coli KTE81]
gi|432659767|ref|ZP_19895427.1| cysteinyl-tRNA synthetase [Escherichia coli KTE111]
gi|432684365|ref|ZP_19919683.1| cysteinyl-tRNA synthetase [Escherichia coli KTE156]
gi|432690413|ref|ZP_19925659.1| cysteinyl-tRNA synthetase [Escherichia coli KTE161]
gi|432703095|ref|ZP_19938221.1| cysteinyl-tRNA synthetase [Escherichia coli KTE171]
gi|432953686|ref|ZP_20145956.1| cysteinyl-tRNA synthetase [Escherichia coli KTE197]
gi|301073390|gb|EFK88196.1| cysteinyl-tRNA synthetase [Escherichia coli MS 146-1]
gi|315616534|gb|EFU97151.1| cysteinyl-tRNA synthetase [Escherichia coli 3431]
gi|323972179|gb|EGB67391.1| cysteinyl-tRNA synthetase [Escherichia coli TA007]
gi|331037846|gb|EGI10066.1| cysteine--tRNA ligase [Escherichia coli H736]
gi|339413472|gb|AEJ55144.1| cysteinyl-tRNA synthetase [Escherichia coli UMNF18]
gi|345390686|gb|EGX20483.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_S1191]
gi|377999531|gb|EHV62610.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6A]
gi|378001392|gb|EHV64451.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6B]
gi|378003357|gb|EHV66400.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6C]
gi|378013846|gb|EHV76761.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6D]
gi|378016379|gb|EHV79260.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6E]
gi|383101911|gb|AFG39420.1| Cysteinyl-tRNA synthetase [Escherichia coli P12b]
gi|385154446|gb|EIF16459.1| cysteinyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
gi|385540010|gb|EIF86837.1| cysteinyl-tRNA synthetase [Escherichia coli M919]
gi|386123545|gb|EIG72141.1| cysteinyl-tRNA synthetase [Escherichia sp. 4_1_40B]
gi|386225705|gb|EII48030.1| cysteine--tRNA ligase [Escherichia coli 2.3916]
gi|386237023|gb|EII68995.1| cysteine--tRNA ligase [Escherichia coli 2.4168]
gi|386242083|gb|EII78996.1| cysteine--tRNA ligase [Escherichia coli 3.2303]
gi|408198513|gb|EKI23739.1| cysteine--tRNA ligase [Escherichia coli TW15901]
gi|408205859|gb|EKI30689.1| cysteine--tRNA ligase [Escherichia coli TW00353]
gi|408572824|gb|EKK48706.1| cysteine--tRNA ligase [Escherichia coli 8.0566]
gi|408573418|gb|EKK49269.1| cysteine--tRNA ligase [Escherichia coli 8.0569]
gi|430943851|gb|ELC63957.1| cysteinyl-tRNA synthetase [Escherichia coli KTE44]
gi|431165242|gb|ELE65600.1| cysteinyl-tRNA synthetase [Escherichia coli KTE77]
gi|431174119|gb|ELE74180.1| cysteinyl-tRNA synthetase [Escherichia coli KTE81]
gi|431203377|gb|ELF02035.1| cysteinyl-tRNA synthetase [Escherichia coli KTE111]
gi|431224783|gb|ELF21993.1| cysteinyl-tRNA synthetase [Escherichia coli KTE156]
gi|431230901|gb|ELF26671.1| cysteinyl-tRNA synthetase [Escherichia coli KTE161]
gi|431247226|gb|ELF41468.1| cysteinyl-tRNA synthetase [Escherichia coli KTE171]
gi|431470182|gb|ELH50105.1| cysteinyl-tRNA synthetase [Escherichia coli KTE197]
Length = 461
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DGSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|118442910|ref|YP_877177.1| cysteinyl-tRNA synthetase [Clostridium novyi NT]
gi|187629804|sp|A0PXS5.1|SYC_CLONN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118133366|gb|ABK60410.1| cysteinyl-tRNA synthetase [Clostridium novyi NT]
Length = 466
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/482 (40%), Positives = 294/482 (60%), Gaps = 21/482 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
L+NTM+R++E KP +G+V MYVCG T Y+ HIG+ R ++ FD + RY + GY+V +
Sbjct: 3 LFNTMTRQKEEFKPIKDGEVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYRGYKVNF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTD+DDK+I +ANE L R+ E+++D L+ + PR +++M II
Sbjct: 63 IQNFTDIDDKMIKKANEENITVKELGDRFIHEYYKDADGLNIKRATANPRATEYMDEIIQ 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ ++D G+AY V+GDVYFS +F EYG+LSG+ L+D +AG R++VD RKK+P DFA+W
Sbjct: 123 FVKDLIDKGYAYEVNGDVYFSTKQFKEYGKLSGQNLDDLQAGARISVDERKKDPMDFAIW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
KS K GEP W PWG GRPGWHIECS M+ LG + DIH GG DLVFPHHENEIAQS A
Sbjct: 183 KSEKPGEPSWNCPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ +YW+H+ ++ I+++KMSKSL NFFT R+++E Y +RLF++ HYR+P+N+
Sbjct: 243 RNGKTFANYWMHSAYLNINNKKMSKSLNNFFTTREILEKYDAEVIRLFMLSAHYRTPLNF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L+SA +Y + + E+ L + + ++ + V ++ + ++ M DD
Sbjct: 303 SDDLLQSAKASNERLYNAIGNLERLLDEVKVDKVTEN-EKEYVKNLESYKEKYIEKMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T ++ + D +K IN ++T K E + + IR + LG++
Sbjct: 362 FNTADAISVIFDLVKDINTNINTESSK------ELVEYSLELIRELGKPLGILQKS---T 412
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
+L L ++ + IE R ARK+K++ +D IR DL A GI L D+P G
Sbjct: 413 MLDLNA-----------EIEKLIEQRQQARKDKDWALADKIRDDLKARGIVLEDTPQGVR 461
Query: 558 WR 559
W+
Sbjct: 462 WK 463
>gi|429732608|ref|ZP_19267211.1| cysteine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
gi|429155731|gb|EKX98388.1| cysteine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
Length = 459
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/490 (45%), Positives = 290/490 (59%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NT++R++E+ KP GK+GMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY++
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID++ +++ G AY D GDV F V+ F +YG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H+G + +D EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 242 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +K+ D+ F +M
Sbjct: 302 LNYSEENLNLAHGALERLYTALRGIDKSAVAFGGENFVDA---------------FREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T L+ L + + +N L K A RL LAA +LG
Sbjct: 347 DDDFNTPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAA----------ILG---- 392
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LLQL + +A E +V + I+ R AR K++ +DA R L +GI L
Sbjct: 393 -----LLQLDPEQFLQAGSDEGEVAKIEALIKQRNEARTAKDWAAADAARNALTKMGIIL 447
Query: 550 MDSPVGTTWR 559
D P GTTWR
Sbjct: 448 EDGPNGTTWR 457
>gi|384415761|ref|YP_005625123.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|320016265|gb|ADV99836.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 461
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/488 (46%), Positives = 289/488 (59%), Gaps = 34/488 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EPR + H+ I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+M +++ G AY +GDV F+VD P+YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GE WESPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGESRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA A T +F F +M
Sbjct: 302 LNYSEENLKQARASLERLY-------TALRGTDANA--------TPAGGAEFEARFRTAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L K + M + A E +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDIAREVNRL------KNEDMAAANGLAAE--LRKLAQVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
E+ LQ +A +D+V + I+ R AR +K + +DA R L +GI L D
Sbjct: 398 PELFLQGGAQA------DDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLED 451
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 452 GPQGTTWR 459
>gi|26246536|ref|NP_752575.1| cysteinyl-tRNA synthetase [Escherichia coli CFT073]
gi|91209601|ref|YP_539587.1| cysteinyl-tRNA synthetase [Escherichia coli UTI89]
gi|117622783|ref|YP_851696.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O1]
gi|157155754|ref|YP_001461714.1| cysteinyl-tRNA synthetase [Escherichia coli E24377A]
gi|157160050|ref|YP_001457368.1| cysteinyl-tRNA synthetase [Escherichia coli HS]
gi|162139357|ref|YP_688055.2| cysteinyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
gi|170021093|ref|YP_001726047.1| cysteinyl-tRNA synthetase [Escherichia coli ATCC 8739]
gi|191172271|ref|ZP_03033813.1| cysteinyl tRNA synthetase [Escherichia coli F11]
gi|193064170|ref|ZP_03045254.1| cysteinyl tRNA synthetase [Escherichia coli E22]
gi|193067585|ref|ZP_03048552.1| cysteinyl tRNA synthetase [Escherichia coli E110019]
gi|194429574|ref|ZP_03062094.1| cysteinyl tRNA synthetase [Escherichia coli B171]
gi|194437452|ref|ZP_03069549.1| cysteinyl tRNA synthetase [Escherichia coli 101-1]
gi|209917742|ref|YP_002291826.1| cysteinyl-tRNA synthetase [Escherichia coli SE11]
gi|218553090|ref|YP_002386003.1| cysteinyl-tRNA synthetase [Escherichia coli IAI1]
gi|218557437|ref|YP_002390350.1| cysteinyl-tRNA synthetase [Escherichia coli S88]
gi|218688385|ref|YP_002396597.1| cysteinyl-tRNA synthetase [Escherichia coli ED1a]
gi|218693989|ref|YP_002401656.1| cysteinyl-tRNA synthetase [Escherichia coli 55989]
gi|218698893|ref|YP_002406522.1| cysteinyl-tRNA synthetase [Escherichia coli IAI39]
gi|227884465|ref|ZP_04002270.1| cysteinyl-tRNA synthetase [Escherichia coli 83972]
gi|237707473|ref|ZP_04537954.1| cysteinyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|251784032|ref|YP_002998336.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|253774486|ref|YP_003037317.1| cysteinyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160594|ref|YP_003043702.1| cysteinyl-tRNA synthetase [Escherichia coli B str. REL606]
gi|254287398|ref|YP_003053146.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|260842721|ref|YP_003220499.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
gi|293408676|ref|ZP_06652515.1| cysteinyl-tRNA synthetase [Escherichia coli B354]
gi|293413782|ref|ZP_06656431.1| cysteinyl-tRNA synthetase [Escherichia coli B185]
gi|293418593|ref|ZP_06661028.1| cysteinyl-tRNA synthetase [Escherichia coli B088]
gi|297517317|ref|ZP_06935703.1| cysteinyl-tRNA synthetase [Escherichia coli OP50]
gi|300819552|ref|ZP_07099746.1| cysteinyl-tRNA synthetase [Escherichia coli MS 107-1]
gi|300820228|ref|ZP_07100380.1| cysteinyl-tRNA synthetase [Escherichia coli MS 119-7]
gi|300903202|ref|ZP_07121133.1| cysteinyl-tRNA synthetase [Escherichia coli MS 84-1]
gi|300919177|ref|ZP_07135707.1| cysteinyl-tRNA synthetase [Escherichia coli MS 115-1]
gi|300925801|ref|ZP_07141656.1| cysteinyl-tRNA synthetase [Escherichia coli MS 182-1]
gi|300929112|ref|ZP_07144605.1| cysteinyl-tRNA synthetase [Escherichia coli MS 187-1]
gi|300940519|ref|ZP_07155089.1| cysteinyl-tRNA synthetase [Escherichia coli MS 21-1]
gi|300987704|ref|ZP_07178317.1| cysteinyl-tRNA synthetase [Escherichia coli MS 45-1]
gi|301049738|ref|ZP_07196683.1| cysteinyl-tRNA synthetase [Escherichia coli MS 185-1]
gi|301301682|ref|ZP_07207817.1| cysteinyl-tRNA synthetase [Escherichia coli MS 124-1]
gi|301327827|ref|ZP_07221017.1| cysteinyl-tRNA synthetase [Escherichia coli MS 78-1]
gi|307314558|ref|ZP_07594160.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|312970621|ref|ZP_07784802.1| cysteinyl-tRNA synthetase [Escherichia coli 1827-70]
gi|331651486|ref|ZP_08352506.1| cysteine--tRNA ligase [Escherichia coli M718]
gi|331656583|ref|ZP_08357545.1| cysteine--tRNA ligase [Escherichia coli TA206]
gi|331661914|ref|ZP_08362837.1| cysteine--tRNA ligase [Escherichia coli TA143]
gi|331666881|ref|ZP_08367755.1| cysteine--tRNA ligase [Escherichia coli TA271]
gi|331672057|ref|ZP_08372853.1| cysteine--tRNA ligase [Escherichia coli TA280]
gi|331676195|ref|ZP_08376907.1| cysteine--tRNA ligase [Escherichia coli H591]
gi|331681920|ref|ZP_08382553.1| cysteine--tRNA ligase [Escherichia coli H299]
gi|332281678|ref|ZP_08394091.1| cysteinyl-tRNA synthetase [Shigella sp. D9]
gi|378714071|ref|YP_005278964.1| cysteinyl-tRNA synthetase [Escherichia coli KO11FL]
gi|386598243|ref|YP_006099749.1| cysteinyl-tRNA synthetase [Escherichia coli IHE3034]
gi|386605520|ref|YP_006111820.1| cysteinyl-tRNA synthetase [Escherichia coli UM146]
gi|386607882|ref|YP_006123368.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|386612720|ref|YP_006132386.1| cysteinyl-tRNA synthetase [Escherichia coli UMNK88]
gi|386622899|ref|YP_006142627.1| cysteinyl-tRNA synthetase [Escherichia coli O7:K1 str. CE10]
gi|386628111|ref|YP_006147831.1| cysteinyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
gi|386633031|ref|YP_006152750.1| cysteinyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
gi|386637937|ref|YP_006104735.1| cysteinyl-tRNA synthetase [Escherichia coli ABU 83972]
gi|386702670|ref|YP_006166507.1| cysteinyl-tRNA synthetase [Escherichia coli KO11FL]
gi|386708326|ref|YP_006172047.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|387606036|ref|YP_006094892.1| cysteinyl-tRNA synthetase [Escherichia coli 042]
gi|387611052|ref|YP_006114168.1| cysteinyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|404373854|ref|ZP_10979084.1| cysteinyl-tRNA synthetase [Escherichia sp. 1_1_43]
gi|407467973|ref|YP_006785585.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407483296|ref|YP_006780445.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2011C-3493]
gi|410483848|ref|YP_006771394.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415800124|ref|ZP_11499194.1| cysteinyl-tRNA synthetase [Escherichia coli E128010]
gi|415814734|ref|ZP_11506332.1| cysteinyl-tRNA synthetase [Escherichia coli LT-68]
gi|415828206|ref|ZP_11514822.1| cysteinyl-tRNA synthetase [Escherichia coli OK1357]
gi|415862805|ref|ZP_11536245.1| cysteinyl-tRNA synthetase [Escherichia coli MS 85-1]
gi|415877070|ref|ZP_11543353.1| cysteine--tRNA ligase [Escherichia coli MS 79-10]
gi|416283944|ref|ZP_11647051.1| Cysteinyl-tRNA synthetase [Shigella boydii ATCC 9905]
gi|416341862|ref|ZP_11676298.1| Cysteinyl-tRNA synthetase [Escherichia coli EC4100B]
gi|416895976|ref|ZP_11925860.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_7v]
gi|417118733|ref|ZP_11969251.1| cysteine--tRNA ligase [Escherichia coli 1.2741]
gi|417121043|ref|ZP_11970497.1| cysteine--tRNA ligase [Escherichia coli 97.0246]
gi|417132399|ref|ZP_11977184.1| cysteine--tRNA ligase [Escherichia coli 5.0588]
gi|417139602|ref|ZP_11983024.1| cysteine--tRNA ligase [Escherichia coli 97.0259]
gi|417144232|ref|ZP_11986038.1| cysteine--tRNA ligase [Escherichia coli 1.2264]
gi|417152979|ref|ZP_11991770.1| cysteine--tRNA ligase [Escherichia coli 96.0497]
gi|417163431|ref|ZP_11998667.1| cysteine--tRNA ligase [Escherichia coli 99.0741]
gi|417174830|ref|ZP_12004626.1| cysteine--tRNA ligase [Escherichia coli 3.2608]
gi|417179210|ref|ZP_12007310.1| cysteine--tRNA ligase [Escherichia coli 93.0624]
gi|417225306|ref|ZP_12028597.1| cysteine--tRNA ligase [Escherichia coli 96.154]
gi|417229854|ref|ZP_12031440.1| cysteine--tRNA ligase [Escherichia coli 5.0959]
gi|417246914|ref|ZP_12040015.1| cysteine--tRNA ligase [Escherichia coli 9.0111]
gi|417267689|ref|ZP_12055050.1| cysteine--tRNA ligase [Escherichia coli 3.3884]
gi|417288269|ref|ZP_12075554.1| cysteine--tRNA ligase [Escherichia coli TW07793]
gi|417307037|ref|ZP_12093915.1| Cysteinyl-tRNA synthetase [Escherichia coli PCN033]
gi|417579750|ref|ZP_12230571.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_B2F1]
gi|417595456|ref|ZP_12246124.1| cysteinyl-tRNA synthetase [Escherichia coli 3030-1]
gi|417600814|ref|ZP_12251399.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_94C]
gi|417606574|ref|ZP_12257102.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_DG131-3]
gi|417621796|ref|ZP_12272125.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_H.1.8]
gi|417637834|ref|ZP_12288007.1| cysteinyl-tRNA synthetase [Escherichia coli TX1999]
gi|417665611|ref|ZP_12315178.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_O31]
gi|417700365|ref|ZP_12349505.1| cysteinyl-tRNA synthetase [Shigella flexneri K-218]
gi|417706059|ref|ZP_12355124.1| cysteinyl-tRNA synthetase [Shigella flexneri VA-6]
gi|417711094|ref|ZP_12360100.1| cysteinyl-tRNA synthetase [Shigella flexneri K-272]
gi|417716053|ref|ZP_12364986.1| cysteinyl-tRNA synthetase [Shigella flexneri K-227]
gi|417737339|ref|ZP_12385945.1| cysteinyl-tRNA synthetase [Shigella flexneri 4343-70]
gi|417754323|ref|ZP_12402418.1| cysteinyl-tRNA synthetase [Escherichia coli DEC2B]
gi|417803882|ref|ZP_12450917.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
gi|417826525|ref|ZP_12473103.1| cysteinyl-tRNA synthetase [Shigella flexneri J1713]
gi|417831633|ref|ZP_12478155.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
gi|417863774|ref|ZP_12508821.1| hypothetical protein C22711_0707 [Escherichia coli O104:H4 str.
C227-11]
gi|418042639|ref|ZP_12680830.1| cysteinyl-tRNA synthetase [Escherichia coli W26]
gi|418253733|ref|ZP_12878730.1| cysteinyl-tRNA synthetase [Shigella flexneri 6603-63]
gi|418944980|ref|ZP_13497936.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
gi|419168518|ref|ZP_13712916.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7A]
gi|419179511|ref|ZP_13723136.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7C]
gi|419185072|ref|ZP_13728594.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7D]
gi|419190319|ref|ZP_13733787.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7E]
gi|419276658|ref|ZP_13818926.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10E]
gi|419287990|ref|ZP_13830107.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11A]
gi|419293328|ref|ZP_13835389.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11B]
gi|419298769|ref|ZP_13840786.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11C]
gi|419305052|ref|ZP_13846966.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11D]
gi|419310117|ref|ZP_13851993.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11E]
gi|419315395|ref|ZP_13857223.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12A]
gi|419321194|ref|ZP_13862934.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12B]
gi|419327418|ref|ZP_13869051.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12C]
gi|419332855|ref|ZP_13874417.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12D]
gi|419338277|ref|ZP_13879766.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12E]
gi|419344172|ref|ZP_13885556.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13A]
gi|419348605|ref|ZP_13889958.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13B]
gi|419353519|ref|ZP_13894803.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13C]
gi|419358851|ref|ZP_13900082.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13D]
gi|419363853|ref|ZP_13905035.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13E]
gi|419368812|ref|ZP_13909941.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14A]
gi|419373998|ref|ZP_13915054.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14B]
gi|419379419|ref|ZP_13920399.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14C]
gi|419384682|ref|ZP_13925584.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14D]
gi|419699440|ref|ZP_14227056.1| cysteinyl-tRNA synthetase [Escherichia coli SCI-07]
gi|419804372|ref|ZP_14329531.1| cysteinyl-tRNA synthetase [Escherichia coli AI27]
gi|419865801|ref|ZP_14388178.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
gi|419871660|ref|ZP_14393712.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
gi|419915388|ref|ZP_14433754.1| cysteinyl-tRNA synthetase [Escherichia coli KD1]
gi|419924320|ref|ZP_14442211.1| cysteinyl-tRNA synthetase [Escherichia coli 541-15]
gi|419928907|ref|ZP_14446607.1| cysteinyl-tRNA synthetase [Escherichia coli 541-1]
gi|419945465|ref|ZP_14461907.1| cysteinyl-tRNA synthetase [Escherichia coli HM605]
gi|419948837|ref|ZP_14465102.1| cysteinyl-tRNA synthetase [Escherichia coli CUMT8]
gi|420319117|ref|ZP_14820973.1| cysteinyl-tRNA synthetase [Shigella flexneri 2850-71]
gi|420329715|ref|ZP_14831420.1| cysteinyl-tRNA synthetase [Shigella flexneri K-1770]
gi|420384166|ref|ZP_14883554.1| cysteinyl-tRNA synthetase [Escherichia coli EPECa12]
gi|420389867|ref|ZP_14889139.1| cysteinyl-tRNA synthetase [Escherichia coli EPEC C342-62]
gi|421777864|ref|ZP_16214453.1| cysteinyl-tRNA synthetase [Escherichia coli AD30]
gi|422352435|ref|ZP_16433217.1| cysteinyl-tRNA synthetase [Escherichia coli MS 117-3]
gi|422356189|ref|ZP_16436878.1| cysteinyl-tRNA synthetase [Escherichia coli MS 110-3]
gi|422362939|ref|ZP_16443487.1| cysteinyl-tRNA synthetase [Escherichia coli MS 153-1]
gi|422369164|ref|ZP_16449567.1| cysteinyl-tRNA synthetase [Escherichia coli MS 16-3]
gi|422378165|ref|ZP_16458388.1| cysteinyl-tRNA synthetase [Escherichia coli MS 60-1]
gi|422382389|ref|ZP_16462549.1| cysteinyl-tRNA synthetase [Escherichia coli MS 57-2]
gi|422748407|ref|ZP_16802320.1| cysteinyl-tRNA synthetase [Escherichia coli H252]
gi|422753183|ref|ZP_16807010.1| cysteinyl-tRNA synthetase [Escherichia coli H263]
gi|422763319|ref|ZP_16817074.1| cysteinyl-tRNA synthetase [Escherichia coli E1167]
gi|422777227|ref|ZP_16830880.1| cysteinyl-tRNA synthetase [Escherichia coli H120]
gi|422782673|ref|ZP_16835458.1| cysteinyl-tRNA synthetase [Escherichia coli TW10509]
gi|422802421|ref|ZP_16850915.1| cysteinyl-tRNA synthetase [Escherichia coli M863]
gi|422827700|ref|ZP_16875873.1| cysteinyl-tRNA synthetase [Escherichia coli B093]
gi|422839049|ref|ZP_16887021.1| cysteinyl-tRNA synthetase [Escherichia coli H397]
gi|422960410|ref|ZP_16971858.1| cysteinyl-tRNA synthetase [Escherichia coli H494]
gi|422978523|ref|ZP_16977717.1| cysteinyl-tRNA synthetase [Escherichia coli TA124]
gi|422991239|ref|ZP_16982010.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
gi|422993178|ref|ZP_16983942.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
gi|422998389|ref|ZP_16989145.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
gi|423006853|ref|ZP_16997596.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
gi|423008494|ref|ZP_16999232.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
gi|423022680|ref|ZP_17013383.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
gi|423027834|ref|ZP_17018527.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
gi|423033671|ref|ZP_17024355.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
gi|423036537|ref|ZP_17027211.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C1]
gi|423041657|ref|ZP_17032324.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C2]
gi|423048343|ref|ZP_17039000.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C3]
gi|423051927|ref|ZP_17040735.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C4]
gi|423058892|ref|ZP_17047688.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C5]
gi|423710290|ref|ZP_17684640.1| cysteinyl-tRNA synthetase [Escherichia coli B799]
gi|424837002|ref|ZP_18261639.1| cysteinyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
gi|425287081|ref|ZP_18678015.1| cysteine--tRNA ligase [Escherichia coli 3006]
gi|425298721|ref|ZP_18688771.1| cysteine--tRNA ligase [Escherichia coli 07798]
gi|425304029|ref|ZP_18693817.1| cysteine--tRNA ligase [Escherichia coli N1]
gi|425421148|ref|ZP_18802373.1| cysteine--tRNA ligase [Escherichia coli 0.1288]
gi|427803585|ref|ZP_18970652.1| cysteine tRNA synthetase [Escherichia coli chi7122]
gi|427808202|ref|ZP_18975267.1| cysteine tRNA synthetase [Escherichia coli]
gi|429722721|ref|ZP_19257618.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429774816|ref|ZP_19306819.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
gi|429780079|ref|ZP_19312032.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429784131|ref|ZP_19316044.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
gi|429789469|ref|ZP_19321344.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
gi|429795699|ref|ZP_19327525.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
gi|429801625|ref|ZP_19333403.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
gi|429805257|ref|ZP_19337004.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
gi|429810068|ref|ZP_19341770.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
gi|429815828|ref|ZP_19347487.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
gi|429821416|ref|ZP_19353029.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
gi|429907091|ref|ZP_19373060.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429911288|ref|ZP_19377244.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429917124|ref|ZP_19383064.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429922162|ref|ZP_19388083.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429927980|ref|ZP_19393886.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429931912|ref|ZP_19397807.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429933514|ref|ZP_19399404.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429939168|ref|ZP_19405042.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429946811|ref|ZP_19412666.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429949443|ref|ZP_19415291.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429957727|ref|ZP_19423556.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
gi|432356871|ref|ZP_19600118.1| cysteinyl-tRNA synthetase [Escherichia coli KTE4]
gi|432361277|ref|ZP_19604474.1| cysteinyl-tRNA synthetase [Escherichia coli KTE5]
gi|432368498|ref|ZP_19611603.1| cysteinyl-tRNA synthetase [Escherichia coli KTE10]
gi|432375601|ref|ZP_19618615.1| cysteinyl-tRNA synthetase [Escherichia coli KTE12]
gi|432410589|ref|ZP_19653272.1| cysteinyl-tRNA synthetase [Escherichia coli KTE39]
gi|432430637|ref|ZP_19673082.1| cysteinyl-tRNA synthetase [Escherichia coli KTE187]
gi|432435165|ref|ZP_19677566.1| cysteinyl-tRNA synthetase [Escherichia coli KTE188]
gi|432439835|ref|ZP_19682198.1| cysteinyl-tRNA synthetase [Escherichia coli KTE189]
gi|432444959|ref|ZP_19687268.1| cysteinyl-tRNA synthetase [Escherichia coli KTE191]
gi|432453139|ref|ZP_19695381.1| cysteinyl-tRNA synthetase [Escherichia coli KTE193]
gi|432455449|ref|ZP_19697651.1| cysteinyl-tRNA synthetase [Escherichia coli KTE201]
gi|432464537|ref|ZP_19706645.1| cysteinyl-tRNA synthetase [Escherichia coli KTE205]
gi|432469956|ref|ZP_19712009.1| cysteinyl-tRNA synthetase [Escherichia coli KTE206]
gi|432479879|ref|ZP_19721844.1| cysteinyl-tRNA synthetase [Escherichia coli KTE210]
gi|432484246|ref|ZP_19726170.1| cysteinyl-tRNA synthetase [Escherichia coli KTE212]
gi|432492823|ref|ZP_19734661.1| cysteinyl-tRNA synthetase [Escherichia coli KTE213]
gi|432494389|ref|ZP_19736207.1| cysteinyl-tRNA synthetase [Escherichia coli KTE214]
gi|432503229|ref|ZP_19744966.1| cysteinyl-tRNA synthetase [Escherichia coli KTE220]
gi|432522673|ref|ZP_19759812.1| cysteinyl-tRNA synthetase [Escherichia coli KTE230]
gi|432529894|ref|ZP_19766937.1| cysteinyl-tRNA synthetase [Escherichia coli KTE233]
gi|432532707|ref|ZP_19769707.1| cysteinyl-tRNA synthetase [Escherichia coli KTE234]
gi|432541902|ref|ZP_19778763.1| cysteinyl-tRNA synthetase [Escherichia coli KTE236]
gi|432547246|ref|ZP_19784043.1| cysteinyl-tRNA synthetase [Escherichia coli KTE237]
gi|432552535|ref|ZP_19789266.1| cysteinyl-tRNA synthetase [Escherichia coli KTE47]
gi|432567359|ref|ZP_19803886.1| cysteinyl-tRNA synthetase [Escherichia coli KTE53]
gi|432572521|ref|ZP_19809012.1| cysteinyl-tRNA synthetase [Escherichia coli KTE55]
gi|432579200|ref|ZP_19815634.1| cysteinyl-tRNA synthetase [Escherichia coli KTE56]
gi|432582635|ref|ZP_19819045.1| cysteinyl-tRNA synthetase [Escherichia coli KTE57]
gi|432586825|ref|ZP_19823197.1| cysteinyl-tRNA synthetase [Escherichia coli KTE58]
gi|432591639|ref|ZP_19827968.1| cysteinyl-tRNA synthetase [Escherichia coli KTE60]
gi|432596411|ref|ZP_19832700.1| cysteinyl-tRNA synthetase [Escherichia coli KTE62]
gi|432601044|ref|ZP_19837298.1| cysteinyl-tRNA synthetase [Escherichia coli KTE66]
gi|432606405|ref|ZP_19842601.1| cysteinyl-tRNA synthetase [Escherichia coli KTE67]
gi|432620629|ref|ZP_19856675.1| cysteinyl-tRNA synthetase [Escherichia coli KTE76]
gi|432650049|ref|ZP_19885811.1| cysteinyl-tRNA synthetase [Escherichia coli KTE87]
gi|432669451|ref|ZP_19905000.1| cysteinyl-tRNA synthetase [Escherichia coli KTE119]
gi|432678122|ref|ZP_19913546.1| cysteinyl-tRNA synthetase [Escherichia coli KTE142]
gi|432678954|ref|ZP_19914357.1| cysteinyl-tRNA synthetase [Escherichia coli KTE143]
gi|432712244|ref|ZP_19947296.1| cysteinyl-tRNA synthetase [Escherichia coli KTE8]
gi|432717537|ref|ZP_19952539.1| cysteinyl-tRNA synthetase [Escherichia coli KTE9]
gi|432731249|ref|ZP_19966087.1| cysteinyl-tRNA synthetase [Escherichia coli KTE45]
gi|432748981|ref|ZP_19983604.1| cysteinyl-tRNA synthetase [Escherichia coli KTE29]
gi|432753323|ref|ZP_19987891.1| cysteinyl-tRNA synthetase [Escherichia coli KTE22]
gi|432758327|ref|ZP_19992831.1| cysteinyl-tRNA synthetase [Escherichia coli KTE46]
gi|432763814|ref|ZP_19998266.1| cysteinyl-tRNA synthetase [Escherichia coli KTE48]
gi|432769338|ref|ZP_20003702.1| cysteinyl-tRNA synthetase [Escherichia coli KTE50]
gi|432773705|ref|ZP_20007995.1| cysteinyl-tRNA synthetase [Escherichia coli KTE54]
gi|432777378|ref|ZP_20011632.1| cysteinyl-tRNA synthetase [Escherichia coli KTE59]
gi|432782428|ref|ZP_20016614.1| cysteinyl-tRNA synthetase [Escherichia coli KTE63]
gi|432786174|ref|ZP_20020342.1| cysteinyl-tRNA synthetase [Escherichia coli KTE65]
gi|432800808|ref|ZP_20034796.1| cysteinyl-tRNA synthetase [Escherichia coli KTE84]
gi|432804605|ref|ZP_20038551.1| cysteinyl-tRNA synthetase [Escherichia coli KTE91]
gi|432812631|ref|ZP_20046480.1| cysteinyl-tRNA synthetase [Escherichia coli KTE101]
gi|432814022|ref|ZP_20047833.1| cysteinyl-tRNA synthetase [Escherichia coli KTE115]
gi|432819845|ref|ZP_20053559.1| cysteinyl-tRNA synthetase [Escherichia coli KTE118]
gi|432825974|ref|ZP_20059631.1| cysteinyl-tRNA synthetase [Escherichia coli KTE123]
gi|432830510|ref|ZP_20064119.1| cysteinyl-tRNA synthetase [Escherichia coli KTE135]
gi|432833574|ref|ZP_20067122.1| cysteinyl-tRNA synthetase [Escherichia coli KTE136]
gi|432838074|ref|ZP_20071567.1| cysteinyl-tRNA synthetase [Escherichia coli KTE140]
gi|432842808|ref|ZP_20076229.1| cysteinyl-tRNA synthetase [Escherichia coli KTE141]
gi|432848666|ref|ZP_20080179.1| cysteinyl-tRNA synthetase [Escherichia coli KTE144]
gi|432859288|ref|ZP_20085359.1| cysteinyl-tRNA synthetase [Escherichia coli KTE146]
gi|432873191|ref|ZP_20092889.1| cysteinyl-tRNA synthetase [Escherichia coli KTE147]
gi|432880015|ref|ZP_20096835.1| cysteinyl-tRNA synthetase [Escherichia coli KTE154]
gi|432897398|ref|ZP_20108307.1| cysteinyl-tRNA synthetase [Escherichia coli KTE192]
gi|432932861|ref|ZP_20132715.1| cysteinyl-tRNA synthetase [Escherichia coli KTE184]
gi|432959943|ref|ZP_20150198.1| cysteinyl-tRNA synthetase [Escherichia coli KTE202]
gi|432966635|ref|ZP_20155554.1| cysteinyl-tRNA synthetase [Escherichia coli KTE203]
gi|432977242|ref|ZP_20166067.1| cysteinyl-tRNA synthetase [Escherichia coli KTE209]
gi|432994316|ref|ZP_20182933.1| cysteinyl-tRNA synthetase [Escherichia coli KTE218]
gi|432998735|ref|ZP_20187275.1| cysteinyl-tRNA synthetase [Escherichia coli KTE223]
gi|433004052|ref|ZP_20192490.1| cysteinyl-tRNA synthetase [Escherichia coli KTE227]
gi|433011261|ref|ZP_20199666.1| cysteinyl-tRNA synthetase [Escherichia coli KTE229]
gi|433012696|ref|ZP_20201079.1| cysteinyl-tRNA synthetase [Escherichia coli KTE104]
gi|433022269|ref|ZP_20210295.1| cysteinyl-tRNA synthetase [Escherichia coli KTE106]
gi|433027568|ref|ZP_20215443.1| cysteinyl-tRNA synthetase [Escherichia coli KTE109]
gi|433031977|ref|ZP_20219787.1| cysteinyl-tRNA synthetase [Escherichia coli KTE112]
gi|433056859|ref|ZP_20243946.1| cysteinyl-tRNA synthetase [Escherichia coli KTE124]
gi|433061748|ref|ZP_20248711.1| cysteinyl-tRNA synthetase [Escherichia coli KTE125]
gi|433071574|ref|ZP_20258276.1| cysteinyl-tRNA synthetase [Escherichia coli KTE129]
gi|433076721|ref|ZP_20263287.1| cysteinyl-tRNA synthetase [Escherichia coli KTE131]
gi|433086124|ref|ZP_20272528.1| cysteinyl-tRNA synthetase [Escherichia coli KTE137]
gi|433090850|ref|ZP_20277156.1| cysteinyl-tRNA synthetase [Escherichia coli KTE138]
gi|433114472|ref|ZP_20300288.1| cysteinyl-tRNA synthetase [Escherichia coli KTE153]
gi|433119073|ref|ZP_20304787.1| cysteinyl-tRNA synthetase [Escherichia coli KTE157]
gi|433124089|ref|ZP_20309680.1| cysteinyl-tRNA synthetase [Escherichia coli KTE160]
gi|433128846|ref|ZP_20314326.1| cysteinyl-tRNA synthetase [Escherichia coli KTE163]
gi|433133666|ref|ZP_20319049.1| cysteinyl-tRNA synthetase [Escherichia coli KTE166]
gi|433138150|ref|ZP_20323437.1| cysteinyl-tRNA synthetase [Escherichia coli KTE167]
gi|433147978|ref|ZP_20333044.1| cysteinyl-tRNA synthetase [Escherichia coli KTE174]
gi|433152670|ref|ZP_20337640.1| cysteinyl-tRNA synthetase [Escherichia coli KTE176]
gi|433162341|ref|ZP_20347106.1| cysteinyl-tRNA synthetase [Escherichia coli KTE179]
gi|433167315|ref|ZP_20351991.1| cysteinyl-tRNA synthetase [Escherichia coli KTE180]
gi|433172388|ref|ZP_20356948.1| cysteinyl-tRNA synthetase [Escherichia coli KTE232]
gi|433182058|ref|ZP_20366361.1| cysteinyl-tRNA synthetase [Escherichia coli KTE85]
gi|433192455|ref|ZP_20376476.1| cysteinyl-tRNA synthetase [Escherichia coli KTE90]
gi|433197152|ref|ZP_20381078.1| cysteinyl-tRNA synthetase [Escherichia coli KTE94]
gi|433201948|ref|ZP_20385759.1| cysteinyl-tRNA synthetase [Escherichia coli KTE95]
gi|433206671|ref|ZP_20390372.1| cysteinyl-tRNA synthetase [Escherichia coli KTE97]
gi|433211450|ref|ZP_20395065.1| cysteinyl-tRNA synthetase [Escherichia coli KTE99]
gi|433326928|ref|ZP_20403589.1| cysteinyl-tRNA synthetase [Escherichia coli J96]
gi|442597621|ref|ZP_21015406.1| Cysteinyl-tRNA synthetase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|443616547|ref|YP_007380403.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O78]
gi|450185938|ref|ZP_21889301.1| cysteinyl-tRNA synthetase [Escherichia coli SEPT362]
gi|450211309|ref|ZP_21894283.1| cysteinyl-tRNA synthetase [Escherichia coli O08]
gi|29336539|sp|Q8FK44.1|SYC_ECOL6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123266145|sp|Q1RF08.1|SYC_ECOUT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629813|sp|A7ZIT5.1|SYC_ECO24 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629814|sp|A7ZXI1.1|SYC_ECOHS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629815|sp|A1A8J2.1|SYC_ECOK1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187631652|sp|Q0T776.2|SYC_SHIF8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189082063|sp|B1IZ75.1|SYC_ECOLC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710841|sp|B6I0H1.1|SYC_ECOSE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735055|sp|B7ME49.1|SYC_ECO45 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735056|sp|B7NL20.1|SYC_ECO7I RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735057|sp|B7M4M9.1|SYC_ECO8A RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781679|sp|B7L7F3.1|SYC_ECO55 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781680|sp|B7MRI9.1|SYC_ECO81 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|26106935|gb|AAN79119.1|AE016757_23 Cysteinyl-tRNA synthetase [Escherichia coli CFT073]
gi|91071175|gb|ABE06056.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Escherichia coli
UTI89]
gi|115511907|gb|ABI99981.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O1]
gi|157065730|gb|ABV04985.1| cysteinyl tRNA synthetase [Escherichia coli HS]
gi|157077784|gb|ABV17492.1| cysteinyl-tRNA synthetase [Escherichia coli E24377A]
gi|169756021|gb|ACA78720.1| cysteinyl-tRNA synthetase [Escherichia coli ATCC 8739]
gi|190907370|gb|EDV66967.1| cysteinyl tRNA synthetase [Escherichia coli F11]
gi|192929199|gb|EDV82809.1| cysteinyl tRNA synthetase [Escherichia coli E22]
gi|192958997|gb|EDV89433.1| cysteinyl tRNA synthetase [Escherichia coli E110019]
gi|194412371|gb|EDX28673.1| cysteinyl tRNA synthetase [Escherichia coli B171]
gi|194423621|gb|EDX39611.1| cysteinyl tRNA synthetase [Escherichia coli 101-1]
gi|209911001|dbj|BAG76075.1| cysteinyl-tRNA synthase [Escherichia coli SE11]
gi|218350721|emb|CAU96413.1| cysteinyl-tRNA synthetase [Escherichia coli 55989]
gi|218359858|emb|CAQ97400.1| cysteinyl-tRNA synthetase [Escherichia coli IAI1]
gi|218364206|emb|CAR01871.1| cysteinyl-tRNA synthetase [Escherichia coli S88]
gi|218368879|emb|CAR16629.1| cysteinyl-tRNA synthetase [Escherichia coli IAI39]
gi|218425949|emb|CAR06755.1| cysteinyl-tRNA synthetase [Escherichia coli ED1a]
gi|226898683|gb|EEH84942.1| cysteinyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|227838551|gb|EEJ49017.1| cysteinyl-tRNA synthetase [Escherichia coli 83972]
gi|242376305|emb|CAQ30998.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|253325530|gb|ACT30132.1| cysteinyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253972495|gb|ACT38166.1| cysteinyl-tRNA synthetase [Escherichia coli B str. REL606]
gi|253976705|gb|ACT42375.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|257757868|dbj|BAI29365.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
gi|284920336|emb|CBG33396.1| cysteinyl-tRNA synthetase [Escherichia coli 042]
gi|291325121|gb|EFE64536.1| cysteinyl-tRNA synthetase [Escherichia coli B088]
gi|291433840|gb|EFF06813.1| cysteinyl-tRNA synthetase [Escherichia coli B185]
gi|291471854|gb|EFF14337.1| cysteinyl-tRNA synthetase [Escherichia coli B354]
gi|294494083|gb|ADE92839.1| cysteinyl-tRNA synthetase [Escherichia coli IHE3034]
gi|300298494|gb|EFJ54879.1| cysteinyl-tRNA synthetase [Escherichia coli MS 185-1]
gi|300404775|gb|EFJ88313.1| cysteinyl-tRNA synthetase [Escherichia coli MS 84-1]
gi|300407683|gb|EFJ91221.1| cysteinyl-tRNA synthetase [Escherichia coli MS 45-1]
gi|300413722|gb|EFJ97032.1| cysteinyl-tRNA synthetase [Escherichia coli MS 115-1]
gi|300418111|gb|EFK01422.1| cysteinyl-tRNA synthetase [Escherichia coli MS 182-1]
gi|300454692|gb|EFK18185.1| cysteinyl-tRNA synthetase [Escherichia coli MS 21-1]
gi|300462904|gb|EFK26397.1| cysteinyl-tRNA synthetase [Escherichia coli MS 187-1]
gi|300527013|gb|EFK48082.1| cysteinyl-tRNA synthetase [Escherichia coli MS 119-7]
gi|300527878|gb|EFK48940.1| cysteinyl-tRNA synthetase [Escherichia coli MS 107-1]
gi|300843179|gb|EFK70939.1| cysteinyl-tRNA synthetase [Escherichia coli MS 124-1]
gi|300845630|gb|EFK73390.1| cysteinyl-tRNA synthetase [Escherichia coli MS 78-1]
gi|306905876|gb|EFN36399.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|307552429|gb|ADN45204.1| cysteinyl-tRNA synthetase [Escherichia coli ABU 83972]
gi|307628004|gb|ADN72308.1| cysteinyl-tRNA synthetase [Escherichia coli UM146]
gi|309700788|emb|CBJ00084.1| cysteinyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|310337270|gb|EFQ02408.1| cysteinyl-tRNA synthetase [Escherichia coli 1827-70]
gi|315059799|gb|ADT74126.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|315256355|gb|EFU36323.1| cysteinyl-tRNA synthetase [Escherichia coli MS 85-1]
gi|315289989|gb|EFU49378.1| cysteinyl-tRNA synthetase [Escherichia coli MS 110-3]
gi|315294314|gb|EFU53665.1| cysteinyl-tRNA synthetase [Escherichia coli MS 153-1]
gi|315299089|gb|EFU58343.1| cysteinyl-tRNA synthetase [Escherichia coli MS 16-3]
gi|320180178|gb|EFW55115.1| Cysteinyl-tRNA synthetase [Shigella boydii ATCC 9905]
gi|320201474|gb|EFW76054.1| Cysteinyl-tRNA synthetase [Escherichia coli EC4100B]
gi|323160878|gb|EFZ46803.1| cysteinyl-tRNA synthetase [Escherichia coli E128010]
gi|323170660|gb|EFZ56310.1| cysteinyl-tRNA synthetase [Escherichia coli LT-68]
gi|323184846|gb|EFZ70216.1| cysteinyl-tRNA synthetase [Escherichia coli OK1357]
gi|323379632|gb|ADX51900.1| cysteinyl-tRNA synthetase [Escherichia coli KO11FL]
gi|323945190|gb|EGB41250.1| cysteinyl-tRNA synthetase [Escherichia coli H120]
gi|323952862|gb|EGB48730.1| cysteinyl-tRNA synthetase [Escherichia coli H252]
gi|323958529|gb|EGB54234.1| cysteinyl-tRNA synthetase [Escherichia coli H263]
gi|323965083|gb|EGB60543.1| cysteinyl-tRNA synthetase [Escherichia coli M863]
gi|323975981|gb|EGB71074.1| cysteinyl-tRNA synthetase [Escherichia coli TW10509]
gi|324006401|gb|EGB75620.1| cysteinyl-tRNA synthetase [Escherichia coli MS 57-2]
gi|324010562|gb|EGB79781.1| cysteinyl-tRNA synthetase [Escherichia coli MS 60-1]
gi|324019545|gb|EGB88764.1| cysteinyl-tRNA synthetase [Escherichia coli MS 117-3]
gi|324116764|gb|EGC10678.1| cysteinyl-tRNA synthetase [Escherichia coli E1167]
gi|327254874|gb|EGE66490.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_7v]
gi|331050759|gb|EGI22816.1| cysteine--tRNA ligase [Escherichia coli M718]
gi|331054831|gb|EGI26840.1| cysteine--tRNA ligase [Escherichia coli TA206]
gi|331060336|gb|EGI32300.1| cysteine--tRNA ligase [Escherichia coli TA143]
gi|331066105|gb|EGI37989.1| cysteine--tRNA ligase [Escherichia coli TA271]
gi|331071046|gb|EGI42405.1| cysteine--tRNA ligase [Escherichia coli TA280]
gi|331076253|gb|EGI47535.1| cysteine--tRNA ligase [Escherichia coli H591]
gi|331081122|gb|EGI52287.1| cysteine--tRNA ligase [Escherichia coli H299]
gi|332104030|gb|EGJ07376.1| cysteinyl-tRNA synthetase [Shigella sp. D9]
gi|332341889|gb|AEE55223.1| cysteinyl-tRNA synthetase CysS [Escherichia coli UMNK88]
gi|332760809|gb|EGJ91097.1| cysteinyl-tRNA synthetase [Shigella flexneri 4343-70]
gi|333007742|gb|EGK27218.1| cysteinyl-tRNA synthetase [Shigella flexneri K-218]
gi|333008207|gb|EGK27682.1| cysteinyl-tRNA synthetase [Shigella flexneri VA-6]
gi|333009963|gb|EGK29398.1| cysteinyl-tRNA synthetase [Shigella flexneri K-272]
gi|333020797|gb|EGK40057.1| cysteinyl-tRNA synthetase [Shigella flexneri K-227]
gi|335577090|gb|EGM63323.1| cysteinyl-tRNA synthetase [Shigella flexneri J1713]
gi|338771329|gb|EGP26071.1| Cysteinyl-tRNA synthetase [Escherichia coli PCN033]
gi|340735785|gb|EGR64841.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
gi|340741591|gb|EGR75737.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
gi|341917063|gb|EGT66679.1| hypothetical protein C22711_0707 [Escherichia coli O104:H4 str.
C227-11]
gi|342928251|gb|EGU96973.1| cysteine--tRNA ligase [Escherichia coli MS 79-10]
gi|345343749|gb|EGW76129.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_B2F1]
gi|345354159|gb|EGW86386.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_94C]
gi|345361066|gb|EGW93228.1| cysteinyl-tRNA synthetase [Escherichia coli 3030-1]
gi|345365010|gb|EGW97123.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_DG131-3]
gi|345386371|gb|EGX16206.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_H.1.8]
gi|345395395|gb|EGX25141.1| cysteinyl-tRNA synthetase [Escherichia coli TX1999]
gi|349736637|gb|AEQ11343.1| cysteinyl-tRNA synthetase [Escherichia coli O7:K1 str. CE10]
gi|354858352|gb|EHF18803.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
gi|354860225|gb|EHF20672.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
gi|354866921|gb|EHF27344.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
gi|354877257|gb|EHF37617.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
gi|354879564|gb|EHF39902.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
gi|354883648|gb|EHF43964.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
gi|354885952|gb|EHF46244.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
gi|354889019|gb|EHF49273.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
gi|354901620|gb|EHF61747.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C1]
gi|354905851|gb|EHF65934.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C2]
gi|354908358|gb|EHF68414.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C3]
gi|354918830|gb|EHF78786.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C5]
gi|354922518|gb|EHF82433.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C4]
gi|355419010|gb|AER83207.1| cysteinyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
gi|355423930|gb|AER88126.1| cysteinyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
gi|371592474|gb|EHN81375.1| cysteinyl-tRNA synthetase [Escherichia coli TA124]
gi|371593900|gb|EHN82774.1| cysteinyl-tRNA synthetase [Escherichia coli H494]
gi|371603560|gb|EHN92213.1| cysteinyl-tRNA synthetase [Escherichia coli B093]
gi|371611520|gb|EHO00043.1| cysteinyl-tRNA synthetase [Escherichia coli H397]
gi|375319713|gb|EHS65802.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
gi|377879269|gb|EHU43842.1| cysteinyl-tRNA synthetase [Escherichia coli DEC2B]
gi|378018924|gb|EHV81770.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7A]
gi|378027972|gb|EHV90597.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7C]
gi|378032490|gb|EHV95071.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7D]
gi|378042422|gb|EHW04871.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7E]
gi|378133979|gb|EHW95310.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10E]
gi|378136188|gb|EHW97485.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11A]
gi|378147439|gb|EHX08587.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11B]
gi|378153181|gb|EHX14267.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11D]
gi|378156541|gb|EHX17588.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11C]
gi|378161309|gb|EHX22292.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11E]
gi|378174552|gb|EHX35376.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12B]
gi|378175188|gb|EHX36007.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12A]
gi|378177188|gb|EHX37989.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12C]
gi|378190671|gb|EHX51255.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13A]
gi|378190795|gb|EHX51374.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12D]
gi|378193682|gb|EHX54211.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12E]
gi|378204267|gb|EHX64683.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13B]
gi|378208416|gb|EHX68800.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13D]
gi|378208669|gb|EHX69049.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13C]
gi|378219873|gb|EHX80140.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13E]
gi|378222018|gb|EHX82260.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14A]
gi|378226412|gb|EHX86599.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14B]
gi|378234094|gb|EHX94176.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14C]
gi|378236993|gb|EHX97026.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14D]
gi|380349455|gb|EIA37727.1| cysteinyl-tRNA synthetase [Escherichia coli SCI-07]
gi|383394197|gb|AFH19155.1| cysteinyl-tRNA synthetase [Escherichia coli KO11FL]
gi|383404018|gb|AFH10261.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|383466054|gb|EID61075.1| cysteinyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
gi|383474475|gb|EID66463.1| cysteinyl-tRNA synthetase [Escherichia coli W26]
gi|384472678|gb|EIE56730.1| cysteinyl-tRNA synthetase [Escherichia coli AI27]
gi|385704938|gb|EIG42010.1| cysteinyl-tRNA synthetase [Escherichia coli B799]
gi|386138267|gb|EIG79427.1| cysteine--tRNA ligase [Escherichia coli 1.2741]
gi|386148773|gb|EIG95208.1| cysteine--tRNA ligase [Escherichia coli 97.0246]
gi|386150253|gb|EIH01542.1| cysteine--tRNA ligase [Escherichia coli 5.0588]
gi|386157330|gb|EIH13672.1| cysteine--tRNA ligase [Escherichia coli 97.0259]
gi|386164115|gb|EIH25901.1| cysteine--tRNA ligase [Escherichia coli 1.2264]
gi|386169703|gb|EIH36211.1| cysteine--tRNA ligase [Escherichia coli 96.0497]
gi|386173114|gb|EIH45127.1| cysteine--tRNA ligase [Escherichia coli 99.0741]
gi|386177522|gb|EIH55001.1| cysteine--tRNA ligase [Escherichia coli 3.2608]
gi|386186462|gb|EIH69178.1| cysteine--tRNA ligase [Escherichia coli 93.0624]
gi|386200354|gb|EIH99345.1| cysteine--tRNA ligase [Escherichia coli 96.154]
gi|386206344|gb|EII10850.1| cysteine--tRNA ligase [Escherichia coli 5.0959]
gi|386209542|gb|EII20029.1| cysteine--tRNA ligase [Escherichia coli 9.0111]
gi|386230047|gb|EII57402.1| cysteine--tRNA ligase [Escherichia coli 3.3884]
gi|386247061|gb|EII93234.1| cysteine--tRNA ligase [Escherichia coli TW07793]
gi|388336699|gb|EIL03232.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
gi|388336807|gb|EIL03332.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
gi|388384180|gb|EIL45922.1| cysteinyl-tRNA synthetase [Escherichia coli KD1]
gi|388390266|gb|EIL51760.1| cysteinyl-tRNA synthetase [Escherichia coli 541-15]
gi|388404599|gb|EIL65053.1| cysteinyl-tRNA synthetase [Escherichia coli 541-1]
gi|388415693|gb|EIL75614.1| cysteinyl-tRNA synthetase [Escherichia coli HM605]
gi|388420608|gb|EIL80295.1| cysteinyl-tRNA synthetase [Escherichia coli CUMT8]
gi|391254410|gb|EIQ13572.1| cysteinyl-tRNA synthetase [Shigella flexneri 2850-71]
gi|391259245|gb|EIQ18320.1| cysteinyl-tRNA synthetase [Shigella flexneri K-1770]
gi|391309675|gb|EIQ67343.1| cysteinyl-tRNA synthetase [Escherichia coli EPECa12]
gi|391314928|gb|EIQ72466.1| cysteinyl-tRNA synthetase [Escherichia coli EPEC C342-62]
gi|397787008|gb|EJK97839.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_O31]
gi|397901123|gb|EJL17474.1| cysteinyl-tRNA synthetase [Shigella flexneri 6603-63]
gi|404292676|gb|EJZ49476.1| cysteinyl-tRNA synthetase [Escherichia sp. 1_1_43]
gi|406779010|gb|AFS58434.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055593|gb|AFS75644.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2011C-3493]
gi|407064008|gb|AFS85055.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408218814|gb|EKI43002.1| cysteine--tRNA ligase [Escherichia coli 3006]
gi|408221724|gb|EKI45657.1| cysteine--tRNA ligase [Escherichia coli 07798]
gi|408231841|gb|EKI55102.1| cysteine--tRNA ligase [Escherichia coli N1]
gi|408347739|gb|EKJ61900.1| cysteine--tRNA ligase [Escherichia coli 0.1288]
gi|408457053|gb|EKJ80855.1| cysteinyl-tRNA synthetase [Escherichia coli AD30]
gi|412961767|emb|CCK45676.1| cysteine tRNA synthetase [Escherichia coli chi7122]
gi|412968381|emb|CCJ43001.1| cysteine tRNA synthetase [Escherichia coli]
gi|429351632|gb|EKY88352.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
gi|429352335|gb|EKY89051.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429353093|gb|EKY89802.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
gi|429367006|gb|EKZ03607.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
gi|429367917|gb|EKZ04509.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
gi|429370412|gb|EKZ06978.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
gi|429382799|gb|EKZ19263.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
gi|429385032|gb|EKZ21486.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
gi|429385555|gb|EKZ22008.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
gi|429397248|gb|EKZ33595.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
gi|429398865|gb|EKZ35192.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429399055|gb|EKZ35379.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429410538|gb|EKZ46760.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429412438|gb|EKZ48635.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429419423|gb|EKZ55561.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429427982|gb|EKZ64062.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429434826|gb|EKZ70850.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429435650|gb|EKZ71668.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429440191|gb|EKZ76170.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429444791|gb|EKZ80736.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429451096|gb|EKZ86988.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
gi|429456588|gb|EKZ92433.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
gi|430879681|gb|ELC03012.1| cysteinyl-tRNA synthetase [Escherichia coli KTE4]
gi|430888964|gb|ELC11635.1| cysteinyl-tRNA synthetase [Escherichia coli KTE10]
gi|430891512|gb|ELC14048.1| cysteinyl-tRNA synthetase [Escherichia coli KTE5]
gi|430901505|gb|ELC23473.1| cysteinyl-tRNA synthetase [Escherichia coli KTE12]
gi|430938525|gb|ELC58766.1| cysteinyl-tRNA synthetase [Escherichia coli KTE39]
gi|430956259|gb|ELC74935.1| cysteinyl-tRNA synthetase [Escherichia coli KTE187]
gi|430966744|gb|ELC84107.1| cysteinyl-tRNA synthetase [Escherichia coli KTE188]
gi|430969645|gb|ELC86749.1| cysteinyl-tRNA synthetase [Escherichia coli KTE189]
gi|430974742|gb|ELC91658.1| cysteinyl-tRNA synthetase [Escherichia coli KTE193]
gi|430976334|gb|ELC93209.1| cysteinyl-tRNA synthetase [Escherichia coli KTE191]
gi|430985321|gb|ELD01927.1| cysteinyl-tRNA synthetase [Escherichia coli KTE201]
gi|430997288|gb|ELD13555.1| cysteinyl-tRNA synthetase [Escherichia coli KTE205]
gi|431000023|gb|ELD16097.1| cysteinyl-tRNA synthetase [Escherichia coli KTE206]
gi|431010896|gb|ELD25240.1| cysteinyl-tRNA synthetase [Escherichia coli KTE210]
gi|431013004|gb|ELD26752.1| cysteinyl-tRNA synthetase [Escherichia coli KTE213]
gi|431018648|gb|ELD32079.1| cysteinyl-tRNA synthetase [Escherichia coli KTE212]
gi|431027905|gb|ELD40950.1| cysteinyl-tRNA synthetase [Escherichia coli KTE214]
gi|431042231|gb|ELD52723.1| cysteinyl-tRNA synthetase [Escherichia coli KTE220]
gi|431054793|gb|ELD64362.1| cysteinyl-tRNA synthetase [Escherichia coli KTE230]
gi|431056970|gb|ELD66448.1| cysteinyl-tRNA synthetase [Escherichia coli KTE233]
gi|431063899|gb|ELD73113.1| cysteinyl-tRNA synthetase [Escherichia coli KTE234]
gi|431078419|gb|ELD85477.1| cysteinyl-tRNA synthetase [Escherichia coli KTE236]
gi|431085419|gb|ELD91532.1| cysteinyl-tRNA synthetase [Escherichia coli KTE237]
gi|431086820|gb|ELD92836.1| cysteinyl-tRNA synthetase [Escherichia coli KTE47]
gi|431103192|gb|ELE07862.1| cysteinyl-tRNA synthetase [Escherichia coli KTE53]
gi|431108902|gb|ELE12873.1| cysteinyl-tRNA synthetase [Escherichia coli KTE56]
gi|431110859|gb|ELE14776.1| cysteinyl-tRNA synthetase [Escherichia coli KTE55]
gi|431119651|gb|ELE22650.1| cysteinyl-tRNA synthetase [Escherichia coli KTE57]
gi|431124105|gb|ELE26759.1| cysteinyl-tRNA synthetase [Escherichia coli KTE58]
gi|431133083|gb|ELE35081.1| cysteinyl-tRNA synthetase [Escherichia coli KTE60]
gi|431134078|gb|ELE36044.1| cysteinyl-tRNA synthetase [Escherichia coli KTE62]
gi|431140627|gb|ELE42393.1| cysteinyl-tRNA synthetase [Escherichia coli KTE67]
gi|431143745|gb|ELE45461.1| cysteinyl-tRNA synthetase [Escherichia coli KTE66]
gi|431162988|gb|ELE63428.1| cysteinyl-tRNA synthetase [Escherichia coli KTE76]
gi|431193420|gb|ELE92756.1| cysteinyl-tRNA synthetase [Escherichia coli KTE87]
gi|431207283|gb|ELF05547.1| cysteinyl-tRNA synthetase [Escherichia coli KTE142]
gi|431213841|gb|ELF11697.1| cysteinyl-tRNA synthetase [Escherichia coli KTE119]
gi|431225147|gb|ELF22356.1| cysteinyl-tRNA synthetase [Escherichia coli KTE143]
gi|431259759|gb|ELF52122.1| cysteinyl-tRNA synthetase [Escherichia coli KTE8]
gi|431267141|gb|ELF58674.1| cysteinyl-tRNA synthetase [Escherichia coli KTE9]
gi|431278157|gb|ELF69151.1| cysteinyl-tRNA synthetase [Escherichia coli KTE45]
gi|431300719|gb|ELF90270.1| cysteinyl-tRNA synthetase [Escherichia coli KTE29]
gi|431305704|gb|ELF94025.1| cysteinyl-tRNA synthetase [Escherichia coli KTE22]
gi|431311537|gb|ELF99695.1| cysteinyl-tRNA synthetase [Escherichia coli KTE46]
gi|431313466|gb|ELG01439.1| cysteinyl-tRNA synthetase [Escherichia coli KTE48]
gi|431318910|gb|ELG06603.1| cysteinyl-tRNA synthetase [Escherichia coli KTE50]
gi|431320826|gb|ELG08456.1| cysteinyl-tRNA synthetase [Escherichia coli KTE54]
gi|431330952|gb|ELG18216.1| cysteinyl-tRNA synthetase [Escherichia coli KTE59]
gi|431332140|gb|ELG19383.1| cysteinyl-tRNA synthetase [Escherichia coli KTE63]
gi|431342105|gb|ELG29101.1| cysteinyl-tRNA synthetase [Escherichia coli KTE65]
gi|431351000|gb|ELG37798.1| cysteinyl-tRNA synthetase [Escherichia coli KTE84]
gi|431357523|gb|ELG44190.1| cysteinyl-tRNA synthetase [Escherichia coli KTE101]
gi|431357938|gb|ELG44604.1| cysteinyl-tRNA synthetase [Escherichia coli KTE91]
gi|431369041|gb|ELG55272.1| cysteinyl-tRNA synthetase [Escherichia coli KTE115]
gi|431370847|gb|ELG56640.1| cysteinyl-tRNA synthetase [Escherichia coli KTE118]
gi|431375358|gb|ELG60702.1| cysteinyl-tRNA synthetase [Escherichia coli KTE123]
gi|431380272|gb|ELG65172.1| cysteinyl-tRNA synthetase [Escherichia coli KTE135]
gi|431388736|gb|ELG72459.1| cysteinyl-tRNA synthetase [Escherichia coli KTE136]
gi|431391977|gb|ELG75581.1| cysteinyl-tRNA synthetase [Escherichia coli KTE140]
gi|431397336|gb|ELG80792.1| cysteinyl-tRNA synthetase [Escherichia coli KTE141]
gi|431401975|gb|ELG85296.1| cysteinyl-tRNA synthetase [Escherichia coli KTE144]
gi|431405292|gb|ELG88535.1| cysteinyl-tRNA synthetase [Escherichia coli KTE147]
gi|431407927|gb|ELG91124.1| cysteinyl-tRNA synthetase [Escherichia coli KTE146]
gi|431413639|gb|ELG96404.1| cysteinyl-tRNA synthetase [Escherichia coli KTE154]
gi|431429444|gb|ELH11372.1| cysteinyl-tRNA synthetase [Escherichia coli KTE192]
gi|431456894|gb|ELH37237.1| cysteinyl-tRNA synthetase [Escherichia coli KTE184]
gi|431474459|gb|ELH54276.1| cysteinyl-tRNA synthetase [Escherichia coli KTE203]
gi|431478482|gb|ELH58229.1| cysteinyl-tRNA synthetase [Escherichia coli KTE202]
gi|431482346|gb|ELH62049.1| cysteinyl-tRNA synthetase [Escherichia coli KTE209]
gi|431509650|gb|ELH87899.1| cysteinyl-tRNA synthetase [Escherichia coli KTE218]
gi|431514304|gb|ELH92146.1| cysteinyl-tRNA synthetase [Escherichia coli KTE223]
gi|431517373|gb|ELH94895.1| cysteinyl-tRNA synthetase [Escherichia coli KTE227]
gi|431519473|gb|ELH96925.1| cysteinyl-tRNA synthetase [Escherichia coli KTE229]
gi|431536031|gb|ELI12366.1| cysteinyl-tRNA synthetase [Escherichia coli KTE104]
gi|431541154|gb|ELI16604.1| cysteinyl-tRNA synthetase [Escherichia coli KTE106]
gi|431545638|gb|ELI20285.1| cysteinyl-tRNA synthetase [Escherichia coli KTE109]
gi|431559816|gb|ELI33353.1| cysteinyl-tRNA synthetase [Escherichia coli KTE112]
gi|431574302|gb|ELI47084.1| cysteinyl-tRNA synthetase [Escherichia coli KTE124]
gi|431587891|gb|ELI59241.1| cysteinyl-tRNA synthetase [Escherichia coli KTE125]
gi|431593761|gb|ELI64053.1| cysteinyl-tRNA synthetase [Escherichia coli KTE129]
gi|431601298|gb|ELI70815.1| cysteinyl-tRNA synthetase [Escherichia coli KTE131]
gi|431610286|gb|ELI79587.1| cysteinyl-tRNA synthetase [Escherichia coli KTE137]
gi|431614769|gb|ELI83904.1| cysteinyl-tRNA synthetase [Escherichia coli KTE138]
gi|431636972|gb|ELJ05091.1| cysteinyl-tRNA synthetase [Escherichia coli KTE153]
gi|431649422|gb|ELJ16780.1| cysteinyl-tRNA synthetase [Escherichia coli KTE157]
gi|431650192|gb|ELJ17529.1| cysteinyl-tRNA synthetase [Escherichia coli KTE160]
gi|431651716|gb|ELJ18955.1| cysteinyl-tRNA synthetase [Escherichia coli KTE163]
gi|431663481|gb|ELJ30243.1| cysteinyl-tRNA synthetase [Escherichia coli KTE166]
gi|431665119|gb|ELJ31846.1| cysteinyl-tRNA synthetase [Escherichia coli KTE167]
gi|431676871|gb|ELJ42954.1| cysteinyl-tRNA synthetase [Escherichia coli KTE174]
gi|431678726|gb|ELJ44722.1| cysteinyl-tRNA synthetase [Escherichia coli KTE176]
gi|431692379|gb|ELJ57817.1| cysteinyl-tRNA synthetase [Escherichia coli KTE179]
gi|431694270|gb|ELJ59655.1| cysteinyl-tRNA synthetase [Escherichia coli KTE180]
gi|431696333|gb|ELJ61520.1| cysteinyl-tRNA synthetase [Escherichia coli KTE232]
gi|431711954|gb|ELJ76261.1| cysteinyl-tRNA synthetase [Escherichia coli KTE85]
gi|431721168|gb|ELJ85164.1| cysteinyl-tRNA synthetase [Escherichia coli KTE90]
gi|431725339|gb|ELJ89193.1| cysteinyl-tRNA synthetase [Escherichia coli KTE94]
gi|431726189|gb|ELJ90006.1| cysteinyl-tRNA synthetase [Escherichia coli KTE95]
gi|431733227|gb|ELJ96668.1| cysteinyl-tRNA synthetase [Escherichia coli KTE97]
gi|431736105|gb|ELJ99447.1| cysteinyl-tRNA synthetase [Escherichia coli KTE99]
gi|432345151|gb|ELL39671.1| cysteinyl-tRNA synthetase [Escherichia coli J96]
gi|441653817|emb|CCQ01296.1| Cysteinyl-tRNA synthetase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|443421055|gb|AGC85959.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O78]
gi|449322524|gb|EMD12513.1| cysteinyl-tRNA synthetase [Escherichia coli O08]
gi|449324848|gb|EMD14770.1| cysteinyl-tRNA synthetase [Escherichia coli SEPT362]
Length = 461
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|419389943|ref|ZP_13930782.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15A]
gi|419395117|ref|ZP_13935901.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15B]
gi|419400465|ref|ZP_13941199.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15C]
gi|419405639|ref|ZP_13946342.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15D]
gi|419411130|ref|ZP_13951803.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15E]
gi|422330798|ref|ZP_16411815.1| cysteinyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
gi|373248291|gb|EHP67722.1| cysteinyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
gi|378244745|gb|EHY04687.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15A]
gi|378251328|gb|EHY11228.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15B]
gi|378252296|gb|EHY12190.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15C]
gi|378257368|gb|EHY17207.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15D]
gi|378261321|gb|EHY21116.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15E]
Length = 461
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMTAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|301020339|ref|ZP_07184446.1| cysteinyl-tRNA synthetase [Escherichia coli MS 69-1]
gi|419916744|ref|ZP_14435033.1| cysteinyl-tRNA synthetase [Escherichia coli KD2]
gi|300398784|gb|EFJ82322.1| cysteinyl-tRNA synthetase [Escherichia coli MS 69-1]
gi|388395398|gb|EIL56603.1| cysteinyl-tRNA synthetase [Escherichia coli KD2]
Length = 461
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMITEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|410092099|ref|ZP_11288640.1| cysteinyl-tRNA ligase [Pseudomonas viridiflava UASWS0038]
gi|409760592|gb|EKN45723.1| cysteinyl-tRNA ligase [Pseudomonas viridiflava UASWS0038]
Length = 460
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/489 (44%), Positives = 285/489 (58%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ +P KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LSIYNTLTKSKEVFQPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA + GE +L+ R + H+D L+ L P +EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K +P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDESKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP W+SPWGPGRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWDSPWGPGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L +P F F A+M
Sbjct: 302 INYSEDSLRESKAALERFYHALK----------------GLPVSEPVGGEAFVERFTAAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ +N L T A RL+ LA+ VL VL L +
Sbjct: 346 NDDFGTPEACAVLFEMVREVNRLRETDPAAAAGLAARLKQLAS-------VLGVLQLEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ LR A R D E + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 399 DF------LRAGAEGRVDAAEVEAL--IQARLAARAAKDWAESDRIRDQITAMGVVLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|229845478|ref|ZP_04465607.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
gi|229811581|gb|EEP47281.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
Length = 459
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 293/490 (59%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVERMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +++ A A F F +M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQS-----AVAFGGE----------NFVETFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLL--HTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
DD +T L+ L + + IN L T K A RL L A +LGL
Sbjct: 347 DDDFNTPNALSVLFEMAREINKLKTEDTEKANGLAARLRELGA----------ILGL--- 393
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
L Q EK L+ A +D+V + I+ R AR K++ +DA R +L A+GI L
Sbjct: 394 -----LQQDPEKFLQ-AGSDDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVL 447
Query: 550 MDSPVGTTWR 559
D GTTWR
Sbjct: 448 EDGANGTTWR 457
>gi|194432744|ref|ZP_03065029.1| cysteinyl tRNA synthetase [Shigella dysenteriae 1012]
gi|194419006|gb|EDX35090.1| cysteinyl tRNA synthetase [Shigella dysenteriae 1012]
Length = 461
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHITEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|429083804|ref|ZP_19146830.1| Cysteinyl-tRNA synthetase [Cronobacter condimenti 1330]
gi|426547158|emb|CCJ72871.1| Cysteinyl-tRNA synthetase [Cronobacter condimenti 1330]
Length = 461
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/489 (44%), Positives = 290/489 (59%), Gaps = 36/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NTMSR++E KP G+VGMYVCG+T YDL HIGH R ++ FDV+ RYLR LGY++
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GED ++L R E H+D L+ L P EPR + H+P I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPESEPRATQHIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ Q++ G AY +GDV F+V+ +YG+LS + LE +AG RV V K+NP DF
Sbjct: 122 IEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L + + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDSEAAPAGGEA---------------FETRFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L +A + L +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KAEDSSAANQLAAHLRKLAAVLGLLE--- 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGIALM 550
Q E+ L+ D + IE R ARK K++ +DA R L +GI L
Sbjct: 396 -----QEPEQFLQSGAQANDDEVAEIEALIVKRLEARKAKDWAAADAARDRLTEMGIILE 450
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 451 DGPQGTTWR 459
>gi|392977950|ref|YP_006476538.1| cysteinyl-tRNA ligase [Enterobacter cloacae subsp. dissolvens SDM]
gi|392323883|gb|AFM58836.1| cysteinyl-tRNA ligase [Enterobacter cloacae subsp. dissolvens SDM]
Length = 461
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 290/485 (59%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NTM+R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID+ +++ G AY D GDV FSV P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IDITEKLIARGHAYVADNGDVMFSVPTDPTYGSLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K++ A F F+ M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVEAAGGEA---------------FEARFVEVM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L ++ + + AL +R + +VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KSEDMAAANALASHLRKLSSVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LQ +A ++ E + L I R AR+ K++ +DA R L +GI L D P
Sbjct: 398 PDAFLQSGAQA-DDGEVAEIEAL--INARLEARQAKDWAAADAARNRLTEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|416015368|ref|ZP_11562981.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
B076]
gi|416028228|ref|ZP_11571284.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|422407213|ref|ZP_16484217.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|320325346|gb|EFW81413.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320327670|gb|EFW83678.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330882429|gb|EGH16578.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 460
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/487 (44%), Positives = 283/487 (58%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV +YVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRIYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA + GE +L+ R + H+D L+ L P +EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L +P F F +M
Sbjct: 302 INYSEDSLRESKAALERFYHALK----------------GLPAAEPAGGEAFVERFSTAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L + ++ IN L + LAA K + +VL VL L + +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRES-----DVTAAAGLAARLKQLASVLGVLQLEADDF 400
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
LR A R D + + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 401 ------LRAGAEGRVDAAQVEAL--IQARLAARAAKDWAESDRIRDQITAMGVLLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|238751080|ref|ZP_04612576.1| Cysteinyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
gi|238710770|gb|EEQ02992.1| Cysteinyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
Length = 473
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/486 (44%), Positives = 289/486 (59%), Gaps = 30/486 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 14 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 73
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EPR + H+P I
Sbjct: 74 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIPEI 133
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ AY +GDV F+VD P+YG LS + L+ +AG RV + K+NP DF
Sbjct: 134 IELTERLIAREHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEIADVKRNPMDF 193
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 194 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 253
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+E Y +R FL+ HYRS
Sbjct: 254 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLEYYDAETVRYFLMSGHYRSQ 313
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L + + A +F F A+M
Sbjct: 314 LNYSEENLKQARASLERLYTALRGTDVHAAPAGGA---------------EFEARFRAAM 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L + + + L +R + VLGL+
Sbjct: 359 DDDFNTPEAYSVLFDLAREVNRL--------KTEDITAANGLAAELRKLAHVLGLLEQD- 409
Query: 495 SEVLLQLREKALKRADLTE-DQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
E+ LQ + ++D E ++ I+ R AR +K++ +D+ R L +GI L D P
Sbjct: 410 PELFLQ----SGAQSDGDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLEDGP 465
Query: 554 VGTTWR 559
GTTWR
Sbjct: 466 QGTTWR 471
>gi|349574997|ref|ZP_08886926.1| cysteine--tRNA ligase [Neisseria shayeganii 871]
gi|348013441|gb|EGY52356.1| cysteine--tRNA ligase [Neisseria shayeganii 871]
Length = 469
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/498 (43%), Positives = 288/498 (57%), Gaps = 50/498 (10%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P V MYVCG+T YD H+GHARV V FD++ R+LRH GY + Y
Sbjct: 4 IYNTLTRQKEAFVPLNPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRHSGYPLTY 63
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRN TD+DDKIIARA E GE L+ R+ ++D L L P VEP+ ++H+ +I
Sbjct: 64 VRNITDIDDKIIARAAENGETIAELTARFIAAMNEDAEALGVLRPDVEPKATEHVAQMIR 123
Query: 198 MITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI +++ G AY D GDVY++V +F YGQLSG+ L+D RAG+RV VD K++P DF L
Sbjct: 124 MIERLIAKGKAYAADNGDVYYAVREFAAYGQLSGKSLDDLRAGQRVEVDGFKRDPLDFVL 183
Query: 257 WKSAKEGEP-FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
WK+AK E FW+SPWG GRPGWHIECSAM G +FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKPNEADFWDSPWGRGRPGWHIECSAMGGELFGDTFDIHGGGADLQFPHHENEIAQS 243
Query: 316 CAACNN------------SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALR 363
A + SH+ YW+HNGF+ +D EKMSKSLGNFFTIR V++ Y P +R
Sbjct: 244 VGALGHSCGHTHGGKTIESHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLKAYDPEVVR 303
Query: 364 LFLIGTHYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTS- 422
F++ HYRSP+NYS L+ A + +Y ALK++ P D S
Sbjct: 304 FFILRAHYRSPLNYSDAHLDDAKGALTRLY---------------TALKNTPPADFTLSE 348
Query: 423 -INKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIR 481
N + F A+M+DD T +A L + +N + A L ++
Sbjct: 349 EANDYTRRFYAAMNDDFGTVEAVAVLFELAGEMNKT--------------NSAELAGCLK 394
Query: 482 NVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKD 541
+ VLGL+ + LQ L+ +++ I R AR +K + +SD IR
Sbjct: 395 ALGGVLGLLQR-EPQAFLQ----GGSTGGLSNEEIETLIARRKQARADKNWAESDRIRDL 449
Query: 542 LAAVGIALMDSPVGTTWR 559
L A I L D GTTWR
Sbjct: 450 LTAENIILEDGAGGTTWR 467
>gi|332526279|ref|ZP_08402408.1| cysteinyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
gi|332110113|gb|EGJ10741.1| cysteinyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
Length = 457
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/494 (44%), Positives = 298/494 (60%), Gaps = 53/494 (10%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NT++R+ E P G+V MYVCG+T YDL H+GHAR+ + FDV+YR+L+ GYEV
Sbjct: 3 LRLHNTLTRRLETFVPLEPGRVRMYVCGITVYDLCHMGHARMNLAFDVVYRWLKASGYEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E G +L+ H+D L PP+ EPR ++ +P +
Sbjct: 63 TYVRNITDIDDKIIRRALERGVGIRALTDEMVAAMHRDFAALGLEPPTHEPRATEFVPQM 122
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+D+I ++ NG AYR DGDV F+V +FP YG+LSG+ L++ RAGERVAV K++P DF
Sbjct: 123 LDIIGRLERNGLAYRAEDGDVNFAVRRFPGYGKLSGKSLDELRAGERVAVAGGKEDPLDF 182
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWKSAK EP W+SP+G GRPGWHIECSAMS A LG FD+HGGGMDL FPHHENE
Sbjct: 183 VLWKSAKPEEPAEAKWDSPFGAGRPGWHIECSAMSCALLGERFDLHGGGMDLQFPHHENE 242
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGF+ +D+EKMSKSLGNFFTI V++ + +R F++ THY
Sbjct: 243 IAQSEGAFGHPFVNYWLHNGFLNVDNEKMSKSLGNFFTIADVLKKFDGETVRFFMLRTHY 302
Query: 372 RSPINYSVVQLESASERIFYIYQTLHD-----CEKALSLLDAAALKDSIPPDTVTSINKF 426
RSP N++ L+ A + +Y L CE S AAA K
Sbjct: 303 RSPFNFADSLLDEARAALRRLYTALDGADAVACEVDWSDPRAAAFK-------------- 348
Query: 427 HNDFLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTV 486
A+M DD +T LA L + N+ +R AA+ + + ++ V
Sbjct: 349 -----AAMDDDFNTPGALAVL---FELANEFNRSRD-----------AAMARLLVSLGAV 389
Query: 487 LGLMSTGYSEVLLQLREKALKRADLTED--QVLQRIEDRTVARKNKEYEKSDAIRKDLAA 544
LG +LQ +A +A D ++ ++IE R A++ + + +D IR +LAA
Sbjct: 390 LG---------ILQQAPRAFLQAGTGVDDAEIARQIEARATAKRERRFADADRIRAELAA 440
Query: 545 VGIALMDSPVGTTW 558
G+ L D+P GTTW
Sbjct: 441 QGVELKDTPQGTTW 454
>gi|422765059|ref|ZP_16818786.1| cysteinyl-tRNA synthetase [Escherichia coli E1520]
gi|323938475|gb|EGB34726.1| cysteinyl-tRNA synthetase [Escherichia coli E1520]
Length = 461
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGKYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|432396401|ref|ZP_19639192.1| cysteinyl-tRNA synthetase [Escherichia coli KTE25]
gi|432722093|ref|ZP_19957018.1| cysteinyl-tRNA synthetase [Escherichia coli KTE17]
gi|432726636|ref|ZP_19961518.1| cysteinyl-tRNA synthetase [Escherichia coli KTE18]
gi|432740322|ref|ZP_19975044.1| cysteinyl-tRNA synthetase [Escherichia coli KTE23]
gi|432989634|ref|ZP_20178302.1| cysteinyl-tRNA synthetase [Escherichia coli KTE217]
gi|433109856|ref|ZP_20295732.1| cysteinyl-tRNA synthetase [Escherichia coli KTE150]
gi|430918408|gb|ELC39415.1| cysteinyl-tRNA synthetase [Escherichia coli KTE25]
gi|431268116|gb|ELF59597.1| cysteinyl-tRNA synthetase [Escherichia coli KTE17]
gi|431275345|gb|ELF66374.1| cysteinyl-tRNA synthetase [Escherichia coli KTE18]
gi|431286451|gb|ELF77277.1| cysteinyl-tRNA synthetase [Escherichia coli KTE23]
gi|431498086|gb|ELH77300.1| cysteinyl-tRNA synthetase [Escherichia coli KTE217]
gi|431631059|gb|ELI99378.1| cysteinyl-tRNA synthetase [Escherichia coli KTE150]
Length = 461
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/489 (44%), Positives = 292/489 (59%), Gaps = 36/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLE--- 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGIALM 550
Q E L+ T+D + IE R ARK K++ +DA R L +GI L
Sbjct: 396 -----QEPEAFLQSGAQTDDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLE 450
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 451 DGPQGTTWR 459
>gi|182420105|ref|ZP_02951339.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237666779|ref|ZP_04526764.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376142|gb|EDT73729.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237657978|gb|EEP55533.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 466
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/482 (40%), Positives = 297/482 (61%), Gaps = 21/482 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
LYN+++R++E P V G+V MYVCG T Y+ HIG+ R ++ FD + RYL + GY+V +
Sbjct: 3 LYNSLTRQKEEFVPIVPGEVKMYVCGPTVYNYFHIGNGRTFIIFDTIRRYLEYRGYKVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTD+DDK+I +AN G L ++ +E++QD L ++ PR ++++ +++
Sbjct: 63 IQNFTDIDDKMINKANAEGITVKELGDKFIDEYYQDADGLQVKRATINPRATEYIDEVVE 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ ++D GFAY +DGDVYFS KF EYG+L G+ LED ++G R++VD RKK+P DFA+W
Sbjct: 123 FVKDLIDRGFAYEIDGDVYFSTKKFEEYGKLCGQNLEDLQSGARISVDERKKDPMDFAVW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
KS K GEP WESPWG GRPGWHIECS M+ LG + DIHGGGMDL FPHHENEIAQS A
Sbjct: 183 KSQKPGEPAWESPWGLGRPGWHIECSCMAKKLLGDTIDIHGGGMDLKFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+YW+H FV +D++KMSKS NF T R+ ++ Y+ +R ++ HYR+ IN+
Sbjct: 243 VTGQKFANYWMHAAFVNVDNKKMSKSENNFVTAREALKKYNSDVIRFLMLSGHYRTQINF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L+SA + +Y +++ E ++ ++ DS + S++K F+ M DD
Sbjct: 303 SAELLDSAKSSVERLYNCVNNLENLINEVNRKEANDS-EKAYLKSLDKHREKFIEKMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T ++ + D +K IN+ + ++S + L + N++ LG G +
Sbjct: 362 FNTADGISVIFDLIKDINN----------NVSIDSSSELCEGTLNLIRELG-SPLG---I 407
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
L + EK+L E ++ + I+ R ARKN+++ +D IR DL A I L D+P G
Sbjct: 408 LQKTEEKSL------EVEIQELIDKRQEARKNRDFALADKIRDDLKARNIILEDTPQGVR 461
Query: 558 WR 559
W+
Sbjct: 462 WK 463
>gi|451965977|ref|ZP_21919232.1| cysteinyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
gi|451315226|dbj|GAC64594.1| cysteinyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
Length = 461
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/485 (46%), Positives = 287/485 (59%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP G+VGMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYLGYTL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P VEPR + H+ I
Sbjct: 62 KYVRNVTDVDDKIIKRALENKESCEQLTERMLAEMHRDFDALNIARPDVEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ Q++ G AY +GDV F+VD P+YG LS + LE +AG RV V K+NP DF
Sbjct: 122 IALVEQLIARGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEVAEVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + ++++YW+H+G V ID EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGAYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA A + F F A+M
Sbjct: 302 LNYSEENLKQARAALERLY-------TALRGTDATA--------QPAADEAFEGRFRAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L KG+ + AL +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL----KGED----MAQANALAAQLRRLAGVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LQ A D Q+ I+ R AR K++ ++D R L A+GI L D P
Sbjct: 398 PDAFLQSGASA---DDGEAAQIEALIKQRNDARAAKDWARADDARDQLNALGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|41203|emb|CAA39691.1| cysteine-tRNA ligase [Escherichia coli K-12]
Length = 461
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +++ R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAAVERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|418464825|ref|ZP_13035764.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|359756780|gb|EHK90937.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
RhAA1]
Length = 459
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/490 (45%), Positives = 291/490 (59%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NT++R++E+ KP GK+GMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY++
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID++ +++ G AY D GDV F V+ F YG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IDIVQKLIQRGHAYVADNGDVMFDVESFKGYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H+G + +D EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 242 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLSHYDAESVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +K+ D+ F +M
Sbjct: 302 LNYSEENLNLAHGALERLYTALRGTDKSAVAFGGENFVDA---------------FREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T L+AL + + +N L K A RL LAA +LG
Sbjct: 347 DDDFNTPNALSALFEMARELNKLKTEDMAKANGLAARLRELAA----------ILG---- 392
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LLQL + +A ED+V + I+ R AR K++ +DA R L +GI L
Sbjct: 393 -----LLQLDPEQFLQAGSDEDEVAKIEALIKQRNEARAAKDWAAADAARNALTEMGIVL 447
Query: 550 MDSPVGTTWR 559
D P GTTWR
Sbjct: 448 EDGPNGTTWR 457
>gi|394989192|ref|ZP_10382026.1| hypothetical protein SCD_01611 [Sulfuricella denitrificans skB26]
gi|393791611|dbj|GAB71665.1| hypothetical protein SCD_01611 [Sulfuricella denitrificans skB26]
Length = 463
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/487 (47%), Positives = 293/487 (60%), Gaps = 26/487 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+SR ++ P GKV MYVCG+T YD H+GHARV V FD++ R+LR G++V
Sbjct: 2 LKIYNTLSRSKQDFIPIESGKVRMYVCGMTVYDYCHLGHARVMVVFDMINRWLRADGFDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E E +L+ R+ +D L P EPR + ++P +
Sbjct: 62 TYVRNITDIDDKIIKRAAENHEPIDALTGRFIAAMDEDATKLGVEKPEHEPRATQYVPGM 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I MI ++DNG AY GDV +SV KFP YG+LSG+ L+D RAGERV V K +P DF
Sbjct: 122 IAMIQALMDNGLAYVARSGDVCYSVHKFPGYGKLSGKSLDDLRAGERVDVAVGKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWKSAK GEP W+SPWG GRPGWHIECS MS A LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKPGEPQWDSPWGQGRPGWHIECSVMSDALLGEHFDIHGGGADLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S + H++YWIHNGFV +D+EKMSKSLGNFFTIR+V+E Y +R F++ HYRSP
Sbjct: 242 SEGTHGHQHVNYWIHNGFVRVDNEKMSKSLGNFFTIREVLERYDAEVVRFFILRAHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L + S L + + + + F A+M
Sbjct: 302 LNYSDQHLDDAKGALTRLYTALKNVPPHPSPLTPHGV-------AIDWHDPYAAAFKAAM 354
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +A L D L K +L SL +R + VLGL+ G
Sbjct: 355 EDDFNTAEAVAVLFD--------LANEANKTHDKQLASL------LRTLGGVLGLLQRGP 400
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
SE L + + T +Q+ QRI R A+K K+Y +D IRK+L G+ L D+P
Sbjct: 401 SEFL----QGGAGESGCTPEQIEQRIAARIAAKKAKDYAAADRIRKELLDQGVVLEDTPQ 456
Query: 555 GTTWRPA 561
GT WR A
Sbjct: 457 GTVWRRA 463
>gi|365966530|ref|YP_004948092.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|365745443|gb|AEW76348.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
Length = 469
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/490 (45%), Positives = 290/490 (59%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NT++R++E+ KP GK+GMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII A E E L R E ++D L+ L P EPR + H+P I
Sbjct: 72 TYVRNITDVDDKIIKHALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID++ +++ G AY D GDV F V+ F +YG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 132 IDIVQKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H+G + +D EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +K+ D+ F +M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGTDKSAVAFGGENFVDA---------------FREAM 356
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T L+ L + + +N L K A RL LAA +LG
Sbjct: 357 DDDFNTPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAA----------ILG---- 402
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LLQL + +A ED+V + I+ R +R K++ +DA R L +GI L
Sbjct: 403 -----LLQLDPEQFLQAGSDEDEVAKIEALIKQRNESRATKDWAAADAARNALTEMGIIL 457
Query: 550 MDSPVGTTWR 559
D P GTTWR
Sbjct: 458 EDGPNGTTWR 467
>gi|419195628|ref|ZP_13739035.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8A]
gi|378052504|gb|EHW14809.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8A]
Length = 461
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 295/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F+V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFNVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYIALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|407708038|ref|YP_006831623.1| 10 kDa chaperonin [Bacillus thuringiensis MC28]
gi|407385723|gb|AFU16224.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis MC28]
Length = 465
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/486 (42%), Positives = 287/486 (59%), Gaps = 31/486 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P E KV MYVCG T Y+ HIG+AR + FD + RYL + GYEV Y
Sbjct: 5 IYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYEVQY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDK+I ANELGED +++ R+ E + +D+ L C +V PRV+++M II+
Sbjct: 65 VSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++++ G+AY +GDVYF +F YG+LS + + D R G R+ V +K++P DFALW
Sbjct: 125 FIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AKEGE FWESPWG GRPGWHIECSAM+ YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+HNG++ ID+EKMSKSLGNF + +++ Y P +R F++ HYR PIN+
Sbjct: 245 LTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINF 304
Query: 378 SVVQLESAS---ERIFYIYQTL-HDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
S L+S + ERI Y L H E + +L D + + KF F +
Sbjct: 305 SEELLQSTNNGLERIKTAYGNLKHRMESSANLTDH-------NEKWLAEMEKFQAAFEEA 357
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T + L + N L K + A K + + +LGL
Sbjct: 358 MDDDFNTANAITELYNVANHANQYLLEEHTSKVVIE-----AYVKQLETLFDILGL---- 408
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L + +L ++++ I+ R ARKN+++ SD IR DL I L D+
Sbjct: 409 -----------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKERNIILEDTA 457
Query: 554 VGTTWR 559
GT W+
Sbjct: 458 QGTRWK 463
>gi|215485603|ref|YP_002328034.1| cysteinyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
gi|254781678|sp|B7UKK3.1|SYC_ECO27 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|215263675|emb|CAS08007.1| cysteinyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
Length = 461
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGRYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|219870367|ref|YP_002474742.1| cysteinyl-tRNA synthetase [Haemophilus parasuis SH0165]
gi|254781682|sp|B8F392.1|SYC_HAEPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219690571|gb|ACL31794.1| cysteinyl-tRNA synthetase [Haemophilus parasuis SH0165]
Length = 459
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/492 (44%), Positives = 290/492 (58%), Gaps = 40/492 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+ R++E KP VGMYVCGVT YDL H GH R +V+FDV+ RYLR+LGY +
Sbjct: 2 LKIYNTLKREKEEFKPIHPDHVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII R+ E E L R E H+D L+ L P VEPR + H+P I
Sbjct: 62 RYVRNITDVDDKIIKRSLENNETCDQLVDRMIIEMHKDFDALNILRPDVEPRATQHIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++L G AY DGDV F+V+ F +YG LS + LE +AG RV + S K+NP DF
Sbjct: 122 IAIVEKLLAKGHAYVAEDGDVMFNVESFQKYGALSRQNLEQLQAGARVEIKSVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W+SPWG GRPGWHIECSAM++ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWDSPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++YW+H G +TI+ EKMSKSL NFFTIR ++ Y ++R F + YRS
Sbjct: 242 SCCAHGDDYVNYWLHTGMLTINEEKMSKSLNNFFTIRDILNKYDCESVRYFFLTAQYRSL 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YS + A + + +Y L C+ + L++ +++ F SM
Sbjct: 302 LDYSEENIGLARKALERLYTALRGCDWNVELVEN---------------DQYVTAFKESM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLL--HTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
DD +T LA L + + +N L + + K A RL+ LA VLGL+
Sbjct: 347 DDDFNTPGALAVLFELAREVNKLKAENQAEANKLAARLKQLAG----------VLGLLEQ 396
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
E LQ D D+V + I+ R AR +K + +D R L A+GI L
Sbjct: 397 D-PETFLQ--------GDANNDEVAEIEAFIKQRNEARASKNWAVADEARNKLTAMGIVL 447
Query: 550 MDSPVGTTWRPA 561
D GTTWR A
Sbjct: 448 EDGANGTTWRRA 459
>gi|423439732|ref|ZP_17416638.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG4X2-1]
gi|423450111|ref|ZP_17426989.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5O-1]
gi|423467989|ref|ZP_17444757.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-1]
gi|423537389|ref|ZP_17513807.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB2-9]
gi|423543117|ref|ZP_17519505.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB4-10]
gi|423626968|ref|ZP_17602743.1| cysteinyl-tRNA synthetase [Bacillus cereus VD148]
gi|401126734|gb|EJQ34468.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5O-1]
gi|401166817|gb|EJQ74117.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB4-10]
gi|401250163|gb|EJR56467.1| cysteinyl-tRNA synthetase [Bacillus cereus VD148]
gi|402411856|gb|EJV44219.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-1]
gi|402421913|gb|EJV54157.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG4X2-1]
gi|402459095|gb|EJV90833.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB2-9]
Length = 465
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/486 (42%), Positives = 287/486 (59%), Gaps = 31/486 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P E KV MYVCG T Y+ HIG+AR + FD + RYL + GYEV Y
Sbjct: 5 IYNTLTRQKEKFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYEVQY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDK+I ANELGED +++ R+ E + +D+ L C +V PRV+++M II+
Sbjct: 65 VSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++++ G+AY +GDVYF +F YG+LS + + D R G R+ V +K++P DFALW
Sbjct: 125 FIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AKEGE FWESPWG GRPGWHIECSAM+ YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+HNG++ ID+EKMSKSLGNF + +++ Y P +R F++ HYR PIN+
Sbjct: 245 LTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINF 304
Query: 378 SVVQLESAS---ERIFYIYQTL-HDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
S L+S + ERI Y L H E + +L D + + KF F +
Sbjct: 305 SEELLQSTNNGLERIKTAYGNLKHRMESSANLTDH-------NEKWLAEMEKFQAAFEEA 357
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T + L + N L K + A K + + +LGL
Sbjct: 358 MDDDFNTANAITELYNVANHANQYLLEEHTSKVVIE-----AYVKQLETLFDILGL---- 408
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L + +L ++++ I+ R ARKN+++ SD IR DL I L D+
Sbjct: 409 -----------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKERNIILEDTA 457
Query: 554 VGTTWR 559
GT W+
Sbjct: 458 QGTRWK 463
>gi|398832797|ref|ZP_10590948.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. YR522]
gi|398222691|gb|EJN09059.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. YR522]
Length = 494
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/524 (41%), Positives = 307/524 (58%), Gaps = 40/524 (7%)
Query: 45 FSTLNSSPN--VIDDKSNGKTDGDDKPASASTQLWLYNTMSRKRELVKPKVEGKVGMYVC 102
F L+ P+ D+S G K ++L +YNT++R +++ P GKV +YVC
Sbjct: 4 FQALSKPPSHRARQDRSTALRRGRTKNFHPMSELKIYNTLARDKQIFSPIEPGKVRLYVC 63
Query: 103 GVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNFTDVDDKIIARANELGEDPISL 162
G+T YD H+GHARV V FD++ R+LR +GY+V YVRN TD+DDKII RA + GE L
Sbjct: 64 GMTVYDFCHLGHARVMVVFDMVQRWLRSVGYDVTYVRNITDIDDKIIKRALDNGESIRQL 123
Query: 163 SRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQILDNGFAYRV-DGDVYFSVDK 221
+ R+ ++D L P EPR + ++P ++++I ++ NG AY DGDV ++V +
Sbjct: 124 TERFIVAMNEDADALGVQRPDHEPRATQYVPQMLELIGKLQANGLAYLAEDGDVNYAVRE 183
Query: 222 FPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKEGEP---FWESPWGPGRPGW 278
FP YG+LSG+ L+D RAGERV V++ K++P DF LWK+AK+GEP W+S WG GRPGW
Sbjct: 184 FPGYGRLSGKSLDDLRAGERVDVNTGKRDPLDFVLWKAAKQGEPDEAKWDSAWGCGRPGW 243
Query: 279 HIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNNSHISYWIHNGFVTIDSE 338
HIECSAM+ LG FDIHGGG DL FPHHENEIAQS A ++ ++YW+HNGFV +D+E
Sbjct: 244 HIECSAMAGDLLGEHFDIHGGGQDLQFPHHENEIAQSEGAHGHAFVNYWMHNGFVRVDNE 303
Query: 339 KMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYSVVQLESASERIFYIYQTLHD 398
KMSKSLGNFFTIR V++ Y P +R F++ HYRSP+NYS L+ A + + +Y L +
Sbjct: 304 KMSKSLGNFFTIRDVLQKYDPEVVRFFILRAHYRSPLNYSDAHLDDARQALTRLYTALKE 363
Query: 399 CEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDDLHTTVVLAALSDPLKTINDLL 458
A A+ D P F +M+DD +T + L+ L + N++
Sbjct: 364 VPPA-----ASGSTDEAPA----------RRFAEAMNDDFNTPLALSVL---FELANEVN 405
Query: 459 HTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEVLLQLREKALKRADLTEDQVLQ 518
TR A + +R + LGL+ L + + + + +
Sbjct: 406 RTRS-----------ADASRQLRQLGARLGLLQRDPEAFL----KGGVAAGGIDQAAIEA 450
Query: 519 RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG-TTWRPA 561
I R+ A+ +++ +D IR +L A G+ L D P G T WR A
Sbjct: 451 LIAARSAAKAGRDFAAADRIRAELTAAGVVLEDKPGGLTEWRRA 494
>gi|407688198|ref|YP_006803371.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|407291578|gb|AFT95890.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'Balearic Sea
AD45']
Length = 460
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/492 (44%), Positives = 300/492 (60%), Gaps = 39/492 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT +R++ P EGKVG+YVCG+T YDLSH+GHAR Y++FDVL RY+RHLG +V
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYMRHLGLDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARANE GE +L+ R H+D ++ L P VEP VS HM I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIAMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++I +++D G+AY+ GDV F V K+ +YG+LS + L+ +AG RV V + K +P DF
Sbjct: 122 IEIIQRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+ K GEP W+SPWG GRPGWHIECSAM+ +LG FDIHGGG DL FPHHENE+AQ
Sbjct: 182 VLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H G V ++ EKMSKSLGNFFT+R V++ + LR FL+ HYRS
Sbjct: 242 SCCAYDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLMSAHYRSQ 301
Query: 375 INYS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINK--FHND 429
++YS + Q ++A ER++ AL+ + D T +N +
Sbjct: 302 LSYSQDNITQAKAALERLY------------------TALR-GVTVDESTELNHGGYLTR 342
Query: 430 FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGL 489
F A+M+DDL+ + L D + +N +Q +E L ++ + +LG+
Sbjct: 343 FEAAMNDDLNVPEAFSVLFDVARELN---------RQKDNVEEAGKLAAVLKGLGAILGM 393
Query: 490 MSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
+ + L K + D ++ I+ R AR +K++ +DA R L A G+ L
Sbjct: 394 LQSDPDTFL-----KGGEGNDDEAAEIEALIKQRNDARASKDWAAADAARDALNAKGVVL 448
Query: 550 MDSPVGTTWRPA 561
D P GTTWR A
Sbjct: 449 EDGPSGTTWRKA 460
>gi|145298606|ref|YP_001141447.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418360744|ref|ZP_12961412.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142851378|gb|ABO89699.1| Cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356688048|gb|EHI52617.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 458
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/490 (45%), Positives = 294/490 (60%), Gaps = 37/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R++E KP GKVGMYVCGVT YD HIGH R +V FDV+ RYLR+ GY++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYCGYQL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E L+ R + HQD L + P VEPR + H+ I
Sbjct: 62 NYVRNVTDVDDKIIKRAAETNVTCDDLTERLIGDMHQDFDALGMVRPDVEPRATQHISEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ ++ AY D GDV F VD + +YG+LSG+ LE +AG RV V K+NP DF
Sbjct: 122 IELVESLIAQDHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVGVVDAKRNPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++ +LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAESVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L D L + AA + + F+ +M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRD----LPVAAAAGGDEQVAR------------FVDAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D ++ IN +++A + A L +R + VLG
Sbjct: 346 DDDFNTPEAYSALFDLVREIN--------RQKAEDMSVAAGLGARLRELGAVLG------ 391
Query: 495 SEVLLQLREKALKRADLTEDQV--LQR-IEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+LQ A + D +++V ++R I +R AR +K + +DA R L +GI L D
Sbjct: 392 ---ILQQDPDAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARARLTEMGIVLED 448
Query: 552 SPVGTTWRPA 561
S T+WR A
Sbjct: 449 SAGKTSWRRA 458
>gi|422664696|ref|ZP_16724569.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|330975115|gb|EGH75181.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 460
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 288/489 (58%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GYE+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R + H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YH +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHTEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L K L + + A + F F +M
Sbjct: 302 INYSEDSLRESKAALERFYHAL----KGLPVAEPAGGE------------AFVERFSTAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL L +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDIAAAAGLAARLKQLAS-------VLGVLQLEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ LR A R D E + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 399 DF------LRAGAEGRVDAAEVEAL--IQARLAARAAKDWAESDRIRDQITAMGVLLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|170767865|ref|ZP_02902318.1| cysteinyl tRNA synthetase [Escherichia albertii TW07627]
gi|170123353|gb|EDS92284.1| cysteinyl tRNA synthetase [Escherichia albertii TW07627]
Length = 461
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVERMIAEMHKDFDALNIQRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + +VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLASVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|423620302|ref|ZP_17596133.1| cysteinyl-tRNA synthetase [Bacillus cereus VD115]
gi|401248862|gb|EJR55183.1| cysteinyl-tRNA synthetase [Bacillus cereus VD115]
Length = 465
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/486 (42%), Positives = 287/486 (59%), Gaps = 31/486 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P E KV MYVCG T Y+ HIG+AR + FD + RYL + GYEV Y
Sbjct: 5 IYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYEVQY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDK+I ANELGED +++ R+ E + +D+ L C +V PRV+++M II+
Sbjct: 65 VSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++++ G+AY +GDVYF +F YG+LS + + D R G R+ V +K++P DFALW
Sbjct: 125 FIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGVRIEVGEKKQDPLDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AKEGE FWESPWG GRPGWHIECSAM+ YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KAAKEGEIFWESPWGEGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+HNG++ ID+EKMSKSLGNF + +++ Y P +R F++ HYR PIN+
Sbjct: 245 LTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINF 304
Query: 378 SVVQLESAS---ERIFYIYQTL-HDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
S L+S + ERI Y L H E + +L D + + KF F +
Sbjct: 305 SEELLQSTNNGLERIKTAYGNLKHRMESSANLTDH-------NEKWLAEMEKFQAAFEEA 357
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T + L + N L K + A K + + +LGL
Sbjct: 358 MDDDFNTANAITELYNVANHANQYLLEEHTSKVVIE-----AYVKQLETLFDILGL---- 408
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L + +L ++++ I+ R ARKN+++ SD IR DL I L D+
Sbjct: 409 -----------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKERNIILEDTA 457
Query: 554 VGTTWR 559
GT W+
Sbjct: 458 QGTRWK 463
>gi|422674877|ref|ZP_16734227.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
M302273]
gi|330972601|gb|EGH72667.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 460
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/489 (45%), Positives = 288/489 (58%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H G+ R V FD++ R+LR GYE+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHPGYGRSMVAFDLVTRWLRFSGYEL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R E H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIEAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKEDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L K L + + A + F F +M
Sbjct: 302 INYSEDSLRESKAALERFYHAL----KGLPVAEPAGGE------------AFVERFSTAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L + A RL+ LA+ VL VL L +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDIAAAACLAARLKQLAS-------VLGVLQLEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ LR A R D E + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 399 DF------LRAGAEGRVDAAEVEAL--IQARLAARAAKDWAESDRIRDRITAMGVLLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|213968819|ref|ZP_03396960.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
gi|213926422|gb|EEB59976.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
Length = 466
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/487 (44%), Positives = 283/487 (58%), Gaps = 34/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GY++
Sbjct: 8 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 67
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA + GE +L+ R + H+D L+ L P +EPR +DH+P +
Sbjct: 68 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 127
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 128 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKQDPLDF 187
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 188 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPHHENEIAQ 247
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFT+R V+E YHP +R L+ +HYRS
Sbjct: 248 SEAATGKPYANAWLHCGMIRINGEKMSKSLNNFFTLRDVLEKYHPEVVRYLLVSSHYRSA 307
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L +P F F +M
Sbjct: 308 INYSEDSLRESKAALERFYHALK----------------GLPAAEPAGGEAFVERFTTAM 351
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L T A RL+ LA+ VL VL L +
Sbjct: 352 NDDFGTPEACAVLFEMVREINRLRETDVAAAAGLAARLKQLAS-------VLGVLQLEAD 404
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ LR A R D E + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 405 DF------LRAGAQGRVDAAEVEAL--IQARLAARAAKDWAESDRIRDQITAMGVLLEDG 456
Query: 553 PVGTTWR 559
GTTWR
Sbjct: 457 KGGTTWR 463
>gi|16128510|ref|NP_415059.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
MG1655]
gi|170080109|ref|YP_001729429.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
DH10B]
gi|238899807|ref|YP_002925603.1| cysteinyl-tRNA synthetase [Escherichia coli BW2952]
gi|300949224|ref|ZP_07163257.1| cysteinyl-tRNA synthetase [Escherichia coli MS 116-1]
gi|300954345|ref|ZP_07166803.1| cysteinyl-tRNA synthetase [Escherichia coli MS 175-1]
gi|301022849|ref|ZP_07186685.1| cysteinyl-tRNA synthetase [Escherichia coli MS 196-1]
gi|386596602|ref|YP_006093002.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
gi|387620285|ref|YP_006127912.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
gi|388476629|ref|YP_488815.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
W3110]
gi|417290179|ref|ZP_12077462.1| cysteine--tRNA ligase [Escherichia coli B41]
gi|417616919|ref|ZP_12267351.1| cysteinyl-tRNA synthetase [Escherichia coli G58-1]
gi|417946862|ref|ZP_12590070.1| cysteinyl-tRNA synthetase [Escherichia coli XH140A]
gi|417978453|ref|ZP_12619219.1| cysteinyl-tRNA synthetase [Escherichia coli XH001]
gi|418959182|ref|ZP_13511081.1| cysteinyl-tRNA synthetase [Escherichia coli J53]
gi|419941304|ref|ZP_14457994.1| cysteinyl-tRNA synthetase [Escherichia coli 75]
gi|422769750|ref|ZP_16823441.1| cysteinyl-tRNA synthetase [Escherichia coli E482]
gi|423701304|ref|ZP_17675763.1| cysteinyl-tRNA synthetase [Escherichia coli H730]
gi|432562434|ref|ZP_19799061.1| cysteinyl-tRNA synthetase [Escherichia coli KTE51]
gi|432736050|ref|ZP_19970825.1| cysteinyl-tRNA synthetase [Escherichia coli KTE42]
gi|433046606|ref|ZP_20234034.1| cysteinyl-tRNA synthetase [Escherichia coli KTE120]
gi|442590918|ref|ZP_21009668.1| Cysteinyl-tRNA synthetase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|450239841|ref|ZP_21899168.1| cysteinyl-tRNA ligase [Escherichia coli S17]
gi|135097|sp|P21888.2|SYC_ECOLI RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558631|sp|B1XGC4.1|SYC_ECODH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|259511830|sp|C4ZUX4.1|SYC_ECOBW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|20664375|pdb|1LI5|A Chain A, Crystal Structure Of Cysteinyl-Trna Synthetase
gi|20664376|pdb|1LI5|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase
gi|20664379|pdb|1LI7|A Chain A, Crystal Structure Of Cysteinyl-Trna Synthetase With
Cysteine Substrate Bound
gi|20664380|pdb|1LI7|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase With
Cysteine Substrate Bound
gi|56966182|pdb|1U0B|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase Binary
Complex With Trnacys
gi|41206|emb|CAA41983.1| cysteinyl-tRNA synthetase [Escherichia coli K-12]
gi|145692|gb|AAA23658.1| transfer RNA-Cys synthetase [Escherichia coli]
gi|1773207|gb|AAB40279.1| cysteinyl-tRNA synthetase [Escherichia coli]
gi|1786737|gb|AAC73628.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
MG1655]
gi|85674663|dbj|BAE76303.1| cysteinyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
gi|169887944|gb|ACB01651.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
DH10B]
gi|238860697|gb|ACR62695.1| cysteinyl-tRNA synthetase [Escherichia coli BW2952]
gi|260450291|gb|ACX40713.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
gi|299881060|gb|EFI89271.1| cysteinyl-tRNA synthetase [Escherichia coli MS 196-1]
gi|300318682|gb|EFJ68466.1| cysteinyl-tRNA synthetase [Escherichia coli MS 175-1]
gi|300451342|gb|EFK14962.1| cysteinyl-tRNA synthetase [Escherichia coli MS 116-1]
gi|315135208|dbj|BAJ42367.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
gi|323943145|gb|EGB39302.1| cysteinyl-tRNA synthetase [Escherichia coli E482]
gi|342361392|gb|EGU25531.1| cysteinyl-tRNA synthetase [Escherichia coli XH140A]
gi|344191882|gb|EGV45986.1| cysteinyl-tRNA synthetase [Escherichia coli XH001]
gi|345380793|gb|EGX12685.1| cysteinyl-tRNA synthetase [Escherichia coli G58-1]
gi|359331278|dbj|BAL37725.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
MDS42]
gi|384377884|gb|EIE35776.1| cysteinyl-tRNA synthetase [Escherichia coli J53]
gi|385712658|gb|EIG49600.1| cysteinyl-tRNA synthetase [Escherichia coli H730]
gi|386256217|gb|EIJ05905.1| cysteine--tRNA ligase [Escherichia coli B41]
gi|388400992|gb|EIL61672.1| cysteinyl-tRNA synthetase [Escherichia coli 75]
gi|431099667|gb|ELE04687.1| cysteinyl-tRNA synthetase [Escherichia coli KTE51]
gi|431286646|gb|ELF77470.1| cysteinyl-tRNA synthetase [Escherichia coli KTE42]
gi|431572510|gb|ELI45342.1| cysteinyl-tRNA synthetase [Escherichia coli KTE120]
gi|441608739|emb|CCP95581.1| Cysteinyl-tRNA synthetase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|449324899|gb|EMD14820.1| cysteinyl-tRNA ligase [Escherichia coli S17]
gi|227964|prf||1714234A Cys-tRNA synthetase
Length = 461
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE +++ R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|423381863|ref|ZP_17359146.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1O-2]
gi|423543577|ref|ZP_17519935.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB5-5]
gi|401187742|gb|EJQ94814.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB5-5]
gi|401628489|gb|EJS46330.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1O-2]
Length = 465
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/486 (42%), Positives = 287/486 (59%), Gaps = 31/486 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P E KV MYVCG T Y+ HIG+AR + FD + RYL + GYEV Y
Sbjct: 5 IYNTLTRQKEKFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYEVQY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDK+I ANELGED +++ R+ E + +D+ L C +V PRV+++M II+
Sbjct: 65 VSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++++ G+AY +GDVYF +F YG+LS + + D R G R+ V +K++P DFALW
Sbjct: 125 FIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AKEGE FWESPWG GRPGWHIECSAM+ YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+HNG++ ID+EKMSKSLGNF + +++ Y P +R F++ HYR PIN+
Sbjct: 245 LTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINF 304
Query: 378 SVVQLESAS---ERIFYIYQTL-HDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
S L+S + ERI Y L H E + +L D + + KF F +
Sbjct: 305 SEELLQSTNNGLERIKTAYGNLKHRMESSANLTDH-------NEKWLAEMEKFQAAFEEA 357
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T + L + N L K + A K + + +LGL
Sbjct: 358 MDDDFNTANAITELYNVANHANQYLLEEHTSKVVIE-----AYVKQLETLFDILGL---- 408
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L + +L ++++ I+ R ARKN+++ SD IR DL I L D+
Sbjct: 409 -----------ELAKEELLDEEIEVLIQKRIEARKNRDFALSDQIRDDLKERNIILEDTA 457
Query: 554 VGTTWR 559
GT W+
Sbjct: 458 QGTRWK 463
>gi|417253478|ref|ZP_12045237.1| cysteine--tRNA ligase [Escherichia coli 4.0967]
gi|386217409|gb|EII33898.1| cysteine--tRNA ligase [Escherichia coli 4.0967]
Length = 461
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|218547963|ref|YP_002381754.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
gi|422806499|ref|ZP_16854931.1| cysteinyl-tRNA synthetase [Escherichia fergusonii B253]
gi|432390459|ref|ZP_19633323.1| cysteinyl-tRNA synthetase [Escherichia coli KTE21]
gi|226735060|sp|B7LJI4.1|SYC_ESCF3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218355504|emb|CAQ88115.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
gi|324113037|gb|EGC07013.1| cysteinyl-tRNA synthetase [Escherichia fergusonii B253]
gi|430922816|gb|ELC43563.1| cysteinyl-tRNA synthetase [Escherichia coli KTE21]
Length = 461
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMVAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|89100736|ref|ZP_01173591.1| cysteinyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
gi|89084553|gb|EAR63699.1| cysteinyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
Length = 465
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/485 (43%), Positives = 288/485 (59%), Gaps = 29/485 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNTMSR++E P EGKV MYVCG T Y+ HIG+AR + FD + RYL GY+V Y
Sbjct: 5 IYNTMSRQKEEFIPLEEGKVKMYVCGPTVYNYIHIGNARPPIVFDTVRRYLEFRGYDVQY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
+ NFTDVDDK+I A ELGED S++ R+ + + +D+ L C V PRV++ M II
Sbjct: 65 ISNFTDVDDKLIRAAKELGEDVPSIAERFIDAYFEDVSALGCKRADVHPRVTESMDLIIQ 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I +++ GFAY +GDVYF +F EYG+LS + +++ R G R+AV +K++ DFALW
Sbjct: 125 FIEALIEKGFAYESNGDVYFHTRRFDEYGKLSQQSIDELRVGARIAVGEKKQDALDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AKEGE WESPWG GRPGWHIECSAM+ YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KTAKEGEISWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLSFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+HNG++ I++EKMSKSLGNF + +++ + P LR F++ HYR PINY
Sbjct: 245 LTGKTFARYWMHNGYININNEKMSKSLGNFVLVHDIIKKHDPQVLRFFMLSVHYRHPINY 304
Query: 378 SVVQLE---SASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
S LE S ERI YQ L ++A +A L D+ + + I H +F+ M
Sbjct: 305 SDELLENTRSGLERITTSYQNLAHRKEA-----SAELTDN-NSEWLKKIEDLHGEFIKEM 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T ++ L + + N L + +E + A K + VLGL
Sbjct: 359 DDDFNTANGISVLFELSRQANYYLLEKN-----TSVEVIEAFMKEFEILFDVLGL----- 408
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+L +L +D++ IE R ARK + ++ SD IR L + I L D+
Sbjct: 409 ----------SLGGEELLDDEIDALIEKRNQARKERNFQLSDQIRDQLKEMNIILEDTAQ 458
Query: 555 GTTWR 559
GT W+
Sbjct: 459 GTRWK 463
>gi|416074249|ref|ZP_11584479.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|444337722|ref|ZP_21151657.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|348006937|gb|EGY47302.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|443546405|gb|ELT56069.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
Length = 469
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/490 (45%), Positives = 290/490 (59%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L L+NT++R++E+ KP GK+GMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R E ++D L+ L P EPR + H+P I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
ID++ +++ G AY D GDV F V+ F +YG+LS + LE +AG R+ ++ KKN DF
Sbjct: 132 IDIVQKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNTMDF 191
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K EP W+SPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A N +++YW+H+G + +D EKMSKSLGNFFTIR V+ Y ++R FL+ HYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +K+ D+ F +M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGTDKSAVAFGGENFVDA---------------FREAM 356
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQ--AMRLESLAALEKTIRNVLTVLGLMST 492
DD +T L+ L + + +N L K A RL LAA +LG
Sbjct: 357 DDDFNTPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAA----------ILG---- 402
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LLQL + +A ED+V + I+ R +R K++ +DA R L +GI L
Sbjct: 403 -----LLQLDPEQFLQAGSDEDEVAKIEALIKQRNESRATKDWAAADAARNALTEMGIIL 457
Query: 550 MDSPVGTTWR 559
D P GTTWR
Sbjct: 458 EDGPNGTTWR 467
>gi|423507884|ref|ZP_17484451.1| cysteinyl-tRNA synthetase [Bacillus cereus HD73]
gi|449086756|ref|YP_007419197.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|402442671|gb|EJV74592.1| cysteinyl-tRNA synthetase [Bacillus cereus HD73]
gi|449020513|gb|AGE75676.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 465
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/486 (42%), Positives = 287/486 (59%), Gaps = 31/486 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P E KV MYVCG T Y+ HIG+AR + FD + RYL + GY+V Y
Sbjct: 5 IYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYDVQY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDK+I ANELGED +++ R+ E + +D+ L C +V PRV+++M II+
Sbjct: 65 VSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++++ G+AY +GDVYF +F YG+LS + + D R G R+ V +K++P DFALW
Sbjct: 125 FIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AKEGE FWESPWG GRPGWHIECSAM+ YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+HNG++ I++EKMSKSLGNF + +++ Y P +R F++ HYR PIN+
Sbjct: 245 LTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINF 304
Query: 378 SVVQLESAS---ERIFYIYQTL-HDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
S L+S + ERI Y L H E + L D + I KF F +
Sbjct: 305 SEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDH-------NEKWLAEIEKFQTAFEEA 357
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M+DD +T + L + N L K + A K + + +LGL
Sbjct: 358 MNDDFNTANAITELYNVANHANQYLLEEHTSKVVIE-----AYVKQLETLFDILGL---- 408
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L + +L + ++ + I+ R ARKN+++ SD IR DL I L D+
Sbjct: 409 -----------ELSKEELLDKEIEELIQKRIEARKNRDFALSDQIRDDLKERNIILEDTA 457
Query: 554 VGTTWR 559
GT W+
Sbjct: 458 QGTRWK 463
>gi|28870897|ref|NP_793516.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|301384135|ref|ZP_07232553.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
gi|302059502|ref|ZP_07251043.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
gi|302134322|ref|ZP_07260312.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|422659710|ref|ZP_16722133.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|37999386|sp|Q87YQ2.1|SYC_PSESM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|28854146|gb|AAO57211.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|331018326|gb|EGH98382.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 460
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/487 (44%), Positives = 283/487 (58%), Gaps = 34/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP KV MYVCG+T YD H+GH R V FD++ R+LR GY++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA + GE +L+ R + H+D L+ L P +EPR +DH+P +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA + + W+H G + I+ EKMSKSL NFFT+R V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKPYANAWLHCGMIRINGEKMSKSLNNFFTLRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L + + Y L +P F F +M
Sbjct: 302 INYSEDSLRESKAALERFYHALK----------------GLPAAEPAGGEAFVERFTTAM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L T A RL+ LA+ VL VL L +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRETDVAAAAGLAARLKQLAS-------VLGVLQLEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ LR A R D E + L I+ R AR K++ +SD IR + A+G+ L D
Sbjct: 399 DF------LRAGAQGRVDAAEVEAL--IQARLAARAAKDWAESDRIRDQITAMGVLLEDG 450
Query: 553 PVGTTWR 559
GTTWR
Sbjct: 451 KGGTTWR 457
>gi|447917289|ref|YP_007397857.1| cysteinyl-tRNA ligase [Pseudomonas poae RE*1-1-14]
gi|445201152|gb|AGE26361.1| cysteinyl-tRNA ligase [Pseudomonas poae RE*1-1-14]
Length = 460
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 283/489 (57%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+S+ +E+ KP KV MYVCG+T YD HIGH R V FD++ R+LR GY++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE +L+ R H+D L+ L P +EPR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIAAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+ K GEP WESPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKATKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPAVAPAGGETFVARFTEVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHT--RKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+DD T A L + ++ IN L T A RL+ LA+ VL VL + +
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRETDLDAAAGLAARLKELAS-------VLGVLQMEAD 398
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ L+ A R D E L I+ R AR K++ +SD IR L A+G+ L D
Sbjct: 399 DF------LQAGAEGRVDAAEVDAL--IQARLAARAGKDWAESDRIRDQLTAMGVVLEDG 450
Query: 553 PVGTTWRPA 561
GTTWR A
Sbjct: 451 KGGTTWRLA 459
>gi|260853742|ref|YP_003227633.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
gi|260866682|ref|YP_003233084.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
gi|415790436|ref|ZP_11495055.1| cysteinyl-tRNA synthetase [Escherichia coli EPECa14]
gi|415820945|ref|ZP_11509959.1| cysteinyl-tRNA synthetase [Escherichia coli OK1180]
gi|417192750|ref|ZP_12014597.1| cysteine--tRNA ligase [Escherichia coli 4.0522]
gi|417218201|ref|ZP_12023803.1| cysteine--tRNA ligase [Escherichia coli JB1-95]
gi|417299406|ref|ZP_12086636.1| cysteine--tRNA ligase [Escherichia coli 900105 (10e)]
gi|417590210|ref|ZP_12240929.1| cysteinyl-tRNA synthetase [Escherichia coli 2534-86]
gi|419201626|ref|ZP_13744853.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8B]
gi|419207530|ref|ZP_13750658.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8C]
gi|419214078|ref|ZP_13757109.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8D]
gi|419219795|ref|ZP_13762752.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8E]
gi|419231040|ref|ZP_13773831.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9B]
gi|419236371|ref|ZP_13779122.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9C]
gi|419241968|ref|ZP_13784617.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9D]
gi|419247379|ref|ZP_13789994.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9E]
gi|419253156|ref|ZP_13795706.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10A]
gi|419259194|ref|ZP_13801652.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10B]
gi|419264908|ref|ZP_13807295.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10C]
gi|419270854|ref|ZP_13813187.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10D]
gi|419282385|ref|ZP_13824605.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10F]
gi|419878696|ref|ZP_14400158.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
gi|419879713|ref|ZP_14401143.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
gi|419890227|ref|ZP_14410523.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
gi|419902951|ref|ZP_14422099.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
gi|419908910|ref|ZP_14427556.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|420090600|ref|ZP_14602368.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
gi|420096953|ref|ZP_14608277.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
gi|420105206|ref|ZP_14615764.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
gi|420111644|ref|ZP_14621469.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
gi|420115267|ref|ZP_14624843.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
gi|420122529|ref|ZP_14631483.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
gi|420128639|ref|ZP_14637191.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10224]
gi|420134779|ref|ZP_14642880.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
gi|424747032|ref|ZP_18175241.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424755822|ref|ZP_18183676.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424771008|ref|ZP_18198173.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|425377365|ref|ZP_18761761.1| cysteine--tRNA ligase [Escherichia coli EC1865]
gi|257752391|dbj|BAI23893.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
gi|257763038|dbj|BAI34533.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
gi|323153431|gb|EFZ39686.1| cysteinyl-tRNA synthetase [Escherichia coli EPECa14]
gi|323178201|gb|EFZ63779.1| cysteinyl-tRNA synthetase [Escherichia coli OK1180]
gi|345345084|gb|EGW77437.1| cysteinyl-tRNA synthetase [Escherichia coli 2534-86]
gi|378056534|gb|EHW18774.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8B]
gi|378063186|gb|EHW25356.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8C]
gi|378068487|gb|EHW30587.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8D]
gi|378072849|gb|EHW34906.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8E]
gi|378082034|gb|EHW43980.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9B]
gi|378090593|gb|EHW52430.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9C]
gi|378094581|gb|EHW56375.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9D]
gi|378102477|gb|EHW64154.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9E]
gi|378107992|gb|EHW69610.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10A]
gi|378116471|gb|EHW77995.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10B]
gi|378119143|gb|EHW80638.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10C]
gi|378121799|gb|EHW83250.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10D]
gi|378139228|gb|EHX00469.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10F]
gi|386189931|gb|EIH78679.1| cysteine--tRNA ligase [Escherichia coli 4.0522]
gi|386193084|gb|EIH87383.1| cysteine--tRNA ligase [Escherichia coli JB1-95]
gi|386257198|gb|EIJ12689.1| cysteine--tRNA ligase [Escherichia coli 900105 (10e)]
gi|388334332|gb|EIL00929.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
gi|388355205|gb|EIL20063.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
gi|388370902|gb|EIL34398.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
gi|388372985|gb|EIL36343.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
gi|388374161|gb|EIL37362.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|394385165|gb|EJE62708.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10224]
gi|394385728|gb|EJE63248.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
gi|394387139|gb|EJE64606.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
gi|394398048|gb|EJE74261.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
gi|394399442|gb|EJE75469.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
gi|394407155|gb|EJE82022.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
gi|394420883|gb|EJE94383.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
gi|394421067|gb|EJE94561.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
gi|408309823|gb|EKJ26938.1| cysteine--tRNA ligase [Escherichia coli EC1865]
gi|421941150|gb|EKT98570.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421947115|gb|EKU04204.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421950090|gb|EKU06987.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str.
CFSAN001630]
Length = 461
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYIALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|437755435|ref|ZP_20834252.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435310569|gb|ELO84997.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
Length = 477
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/482 (46%), Positives = 295/482 (61%), Gaps = 28/482 (5%)
Query: 79 YNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYV 138
+NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++ YV
Sbjct: 21 FNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYV 80
Query: 139 RNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDM 198
RN TD+DDKII RANE GE ++L R E HQD L+ L P EPR + H+ II++
Sbjct: 81 RNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEIIEL 140
Query: 199 ITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF LW
Sbjct: 141 TRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDFVLW 200
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQS
Sbjct: 201 KMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTC 260
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS +NY
Sbjct: 261 AHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNY 320
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S L+ A + +Y L +K+ + A F F+ +M+DD
Sbjct: 321 SEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAMNDD 365
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T + L D + +N L KG+ + + A+ +R + VLGL+ +V
Sbjct: 366 FNTPEAYSVLFDMAREVNRL----KGED----MTAANAMASHLRKISGVLGLLEQ-EPDV 416
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
LQ +A ++ E + L I+ R ARK K++ +DA R LA +GI L D P GTT
Sbjct: 417 FLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQGTT 473
Query: 558 WR 559
WR
Sbjct: 474 WR 475
>gi|366163863|ref|ZP_09463618.1| cysteinyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
Length = 467
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/482 (42%), Positives = 285/482 (59%), Gaps = 19/482 (3%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++RK+E P E +V MY CG T Y+ HIG+AR ++ FD + RYL + GY+V +
Sbjct: 3 IYNTLTRKKEEFVPINEKEVRMYSCGPTVYNYFHIGNARPFIIFDTVRRYLEYRGYDVKF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDK+I RANE G L+ R+ +E+ D L +V P+ ++++ IID
Sbjct: 63 VQNFTDIDDKMIKRANEEGITVKDLADRFIKEYFIDAKGLGIDEATVHPKATENIDAIID 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I ++ +NGFAY V+GDVYFS+ KF EYG+LS LED G V VD RK+NP DFA+W
Sbjct: 123 LIKKLEENGFAYNVNGDVYFSIGKFKEYGKLSHHSLEDLAIGSSVNVDERKQNPMDFAVW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ K GEP W+SPWG GRPGWHIECSAM+ YLG + DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A YW+HNGF+ +++EKMSKS GNFFT+R ++E + +R F++ HYRSPIN+
Sbjct: 243 ASGKPFAKYWMHNGFINVNNEKMSKSAGNFFTVRDIVEKFDYEVIRFFMLSAHYRSPINF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S LE A + IY L + A + D + + + F+ M DD
Sbjct: 303 SADLLEQAQNGLERIYNCLDNLVYLGEHAQAKEMSDE-EKSLQSRLLEIKGKFIEGMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
L+T +AA+ D +K +N + + E + IR + VLG+
Sbjct: 362 LNTADAIAAIFDIVKEVNSNITASSNSSK----EIIDFSHSLIRELGGVLGIGQK----- 412
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
++ + + +V I R ARK K ++ SD IR L +GI L D+P G
Sbjct: 413 ---------QKENNLDSEVEALISQRQQARKEKNWKLSDEIRDKLKDMGIVLEDTPQGVK 463
Query: 558 WR 559
W+
Sbjct: 464 WK 465
>gi|115352164|ref|YP_774003.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria AMMD]
gi|122322791|sp|Q0BDV4.1|SYC_BURCM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|115282152|gb|ABI87669.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria AMMD]
Length = 465
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/489 (45%), Positives = 300/489 (61%), Gaps = 34/489 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R +++ P+ G+V MYVCG+T YD H+GHAR+ V FD++ R+LR +GY V
Sbjct: 4 LRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYRV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD++DKII RA E GE SL+ R+ H+D L P +EPR + +P +
Sbjct: 64 TYVRNITDIEDKIIRRAVENGETIKSLTDRFIGAMHEDEAALGIQRPDLEPRATQFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++ NG+AY+ DGDV +SV KF YG+LSG+ L+D RAGERVA + K++P DF
Sbjct: 124 LGMIEKLETNGYAYQAADGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLDF 183
Query: 255 ALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AK +P W S +G GRPGWHIECSAM LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKRAKADDPPGATWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGFV +D+EKMSKSLGNFFTIR+V+E Y +R F++ THY
Sbjct: 244 IAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRFFIVRTHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
RSP+NYS V L+ A + +Y L D E DA AL + P F
Sbjct: 304 RSPLNYSDVHLDDARASLTRLYTALKDVEP-----DALALDWNEP---------HAQRFA 349
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A+M+DD++T V +A L + IN TR A+L + ++ + +LGL+
Sbjct: 350 AAMNDDINTPVAVATLFELAGEIN---RTRD-----------ASLARQLKQLAGLLGLLG 395
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
LQ A + L D++ +I R A++ K+Y ++D IR +L GIAL D
Sbjct: 396 R-EPRAFLQQATGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALED 454
Query: 552 SPVGTT-WR 559
P G+T WR
Sbjct: 455 KPGGSTEWR 463
>gi|319654847|ref|ZP_08008922.1| cysteinyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
gi|317393410|gb|EFV74173.1| cysteinyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
Length = 467
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/486 (43%), Positives = 289/486 (59%), Gaps = 29/486 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P EGKV MYVCG T Y+ HIG+AR + FD + RYL G++V Y
Sbjct: 5 IYNTLTRQKEDFIPIEEGKVKMYVCGPTVYNYIHIGNARPPIVFDTVRRYLEFRGFDVQY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDK+I ANELG D S++ R+ + +D+ L C V PRV++ + II+
Sbjct: 65 VSNFTDVDDKLIRVANELGTDVPSIAERFINAYFEDVSALGCRKADVHPRVTESIDIIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++D GFAY +GDVY+ KF EYG+LS + +++ R G R+AV +K++ DF LW
Sbjct: 125 FIQTLIDKGFAYESEGDVYYHTRKFDEYGKLSHQSIDELRVGARIAVGEKKQDSLDFVLW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AKEGE WESPWG GRPGWHIECSAM+ YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KAAKEGEIAWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLSFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+HNG++ ID+EKMSKSLGNF + +++ + P LR F++ HYR PINY
Sbjct: 245 LTGKTFARYWMHNGYINIDNEKMSKSLGNFVLVHDIIQKHDPQVLRFFMLSVHYRHPINY 304
Query: 378 SVVQLESAS---ERIFYIYQTL-HDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
S LE+ ERI Y L H E +++L D + D +TS+ H F+
Sbjct: 305 SDELLENTRTGLERIKTSYHNLQHRKEASVNLTD----NNQEWLDKITSL---HEQFIQD 357
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T ++ L + K N L + +E + A K + VLG
Sbjct: 358 MDDDFNTANAVSILFELSKLANYYLMEKN-----TAVEVIDAFTKEFETLFDVLG----- 407
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L L E ADL ++++ Q IE R ARK + +E +D IR L + I L D+P
Sbjct: 408 -----LSLEE---TNADLLDEEIEQLIEQRQQARKERNFELADKIRDQLKEMNIILEDTP 459
Query: 554 VGTTWR 559
G W+
Sbjct: 460 QGIRWK 465
>gi|378696150|ref|YP_005178108.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 10810]
gi|301168673|emb|CBW28264.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 10810]
Length = 459
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 295/488 (60%), Gaps = 36/488 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EP + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPHATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +++ A A F F +M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQS-----AVAFGGE----------NFVETFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T L+ L + + IN L + A + LAA +R + +LGL
Sbjct: 347 DDDFNTPNALSVLFEMAREINKL-----KTEDAEKANGLAA---RLRELGAILGL----- 393
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
L Q EK L+ A +D+V + I+ R AR K++ +DA R +L A+GI L D
Sbjct: 394 ---LQQDPEKFLQ-AGSDDDEVAKIEALIKQRNKARAAKDWAAADAARNELTAMGIVLED 449
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 450 GPNGTTWR 457
>gi|145635477|ref|ZP_01791177.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittAA]
gi|145267242|gb|EDK07246.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittAA]
Length = 459
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 293/490 (59%), Gaps = 40/490 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E+ KP E KVGMYVCGVT YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L R +E ++D L+ L P EPR + H+P I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ G AY D GDV F V+ F EYG+LS + LE +AG R+ ++ KKNP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KE EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A +++YWIH+G + +D EKMSKSLGNFFTIR V+ Y+ A+R FL+ HYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L A + +Y L +++ A A F F +M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQS-----AVAFGGE----------NFVETFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLL--HTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
DD +T L+ L + + IN L T K A RL L A +LGL
Sbjct: 347 DDDFNTPNALSVLFEMAREINKLKTEDTEKANGLAARLRELGA----------ILGL--- 393
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
L Q EK L+ A +D+V + I+ R AR K++ +DA R +L A+GI L
Sbjct: 394 -----LQQDPEKFLQ-AGSDDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVL 447
Query: 550 MDSPVGTTWR 559
D GTTWR
Sbjct: 448 EDGANGTTWR 457
>gi|291543500|emb|CBL16609.1| cysteinyl-tRNA synthetase [Ruminococcus champanellensis 18P13]
Length = 464
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/480 (42%), Positives = 291/480 (60%), Gaps = 22/480 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
++LYNTMSRK+E + P+ +V +Y CG T Y+ HIG+AR FDVL RYL GY V
Sbjct: 1 MYLYNTMSRKKEELLPQQGKQVNIYACGPTVYNFIHIGNARPICAFDVLRRYLTWRGYTV 60
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YV+NFTDVDDKII RANE G ++ +Y E+ D L+ + V P+V+ M I
Sbjct: 61 KYVQNFTDVDDKIIKRANEEGSSAAQVAEKYIAEYKTDAHGLNVMDADVHPQVTTCMQDI 120
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
ID + ++D+G AY DGDVYF FPEYG+LS +ED +AG R+ VD RK++ DFA
Sbjct: 121 IDFVKALVDSGHAYEADGDVYFRTASFPEYGKLSKNSMEDLQAGARIGVDERKESALDFA 180
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
+WK+AK GEP+W+SPWG GRPGWHIECSAMS YLG + DIH GG DL+FPHHENEIAQS
Sbjct: 181 VWKAAKPGEPYWDSPWGKGRPGWHIECSAMSRKYLGDTLDIHCGGQDLIFPHHENEIAQS 240
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
+ + W+HNG++ +D++KMSKSLGNFFT R+V E Y +R ++ HYRSPI
Sbjct: 241 ESVTGKPLANLWMHNGYINVDNKKMSKSLGNFFTAREVAEKYGYEVVRYMMVQAHYRSPI 300
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
NY V L++ + + L+ C L A A + PD++ ++ F+ +M
Sbjct: 301 NYCVELLDACKASL----ERLYTCRDTLDRAIANAPAGAADPDSLALFDQRKQAFITAMD 356
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DDL+T ++ L D ++ +N + A ++L A + + VLGL+
Sbjct: 357 DDLNTADGVSVLFDLVRDLN-----TRSNDPATTKDTLTAGARLFDELTGVLGLLYN--- 408
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
K+ + QV + ++ RTVARK K++ ++D +R ++AA+G A+ ++ G
Sbjct: 409 ----------RKQGNEIPAQVQELVDARTVARKAKDFAEADRLRDEIAALGYAVKETRQG 458
>gi|302390630|ref|YP_003826451.1| cysteinyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
gi|302201258|gb|ADL08828.1| cysteinyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
Length = 465
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/487 (42%), Positives = 299/487 (61%), Gaps = 31/487 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P KV +Y CG T YD H+G+ARV++TFDV+ YL++ GYEV +
Sbjct: 3 IYNTLTRRKEEFIPLNGNKVTIYTCGPTVYDFFHVGNARVFITFDVIRNYLKYKGYEVKF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDK+I RANE G L R+ +E+ +D L+ V PR ++H+ II+
Sbjct: 63 VQNFTDIDDKMIKRANEEGVTVKELGDRFIKEYFKDADALNIKRADVHPRATEHIEDIIE 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I +++ G+AY V GDVYF+ KFP YG+LSG+ LE+ AG RV +KK+P DFALW
Sbjct: 123 FIKVLIEKGYAYEVGGDVYFAARKFPGYGKLSGQNLEELEAGARVEPGEKKKDPIDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ K GEP W SPWG GRPGWHIECSAM+ +LG + DIHGGG DL+FPHHENE+AQS A
Sbjct: 183 KAKKPGEPSWPSPWGEGRPGWHIECSAMAMKHLGETIDIHGGGPDLIFPHHENEVAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+++H G++ I++EKMSKSLGNFFT+R +++ Y+P LR ++ +HYRSPIN+
Sbjct: 243 FTGKPFARFFMHVGYLNINNEKMSKSLGNFFTVRDILKEYNPEVLRFLMLSSHYRSPINF 302
Query: 378 S---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
S + Q +SA ER++ + E A ++ + + NKF + +M
Sbjct: 303 SRELLDQSKSALERLYNALYAMEHLENAAPERPLNGEEEEYLRRQLENKNKFKD----AM 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS--T 492
DD +T +A L D ++ N L+ ++ A++KT VL + G++ +
Sbjct: 359 DDDFNTAGAIAVLFDMIREFNVSLNENSSRE---------AVKKTKEMVLELGGVLGFFS 409
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
+ VLL ++++ Q+I++R ARK K Y +D IR +L A GI L D+
Sbjct: 410 KFEPVLL-------------DEEIEQKIKEREEARKAKNYALADKIRDELRARGIILEDT 456
Query: 553 PVGTTWR 559
P G W+
Sbjct: 457 PAGVRWK 463
>gi|307243392|ref|ZP_07525549.1| cysteine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
gi|306493202|gb|EFM65198.1| cysteine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
Length = 467
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/484 (42%), Positives = 288/484 (59%), Gaps = 23/484 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNTM+RK+E P EGKV MYVCG T Y+ H+G+AR + FD L RY + GYEV Y
Sbjct: 3 IYNTMTRKKEEFIPLEEGKVKMYVCGPTVYNFIHLGNARPFTVFDTLRRYFEYRGYEVTY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTDVDDKII R++E G P ++ +Y +E+ D L +V P+V+D++ +II
Sbjct: 63 IQNFTDVDDKIIKRSHEEGISPEEVAEKYIKEYFIDCDGLGIKRATVHPQVTDNIDNIIV 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ ++D G+AY GDV F KF EYG+LS + +E+ G R+ VD +K++P DF LW
Sbjct: 123 FVQDLIDKGYAYEAGGDVLFRTRKFKEYGKLSHQNIEELELGARIDVDDKKEDPLDFVLW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ KEGEP W+SPWG GRPGWHIECS MS YLG++ DIH GG DL FPHHENEIAQS
Sbjct: 183 KAKKEGEPGWQSPWGEGRPGWHIECSVMSNRYLGNTIDIHAGGQDLQFPHHENEIAQS-- 240
Query: 318 ACNNSHI--SYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
C N H YW+HNG++ +D EKMSKSLGNFFT+R + Y +R FL+ T YR+P+
Sbjct: 241 ECRNGHTFARYWMHNGYINVDGEKMSKSLGNFFTVRDISNKYDLGLVRFFLLATQYRNPV 300
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
N+S LE A + + + E L L ++L+D D V ++K+ F+ +M
Sbjct: 301 NFSDTVLEQAKAGLERLTNARDNAEFILGNLADSSLRDE-EKDMVAGLDKYRERFIEAMD 359
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DDL+T ++ + + K +N + + K+ L I N LT
Sbjct: 360 DDLNTADAISVIFELAKFMNTNISDQSSKE-------FVQLNLDIFNELT---------- 402
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
+L + K+++ D +V I R A+K K + +D IR +L A+GIA+ D+ G
Sbjct: 403 -GVLNIANKSVEEDDSLSQKVEDLIAKRAQAKKEKNFALADQIRDELTAMGIAIEDTRQG 461
Query: 556 TTWR 559
W+
Sbjct: 462 VKWK 465
>gi|423480234|ref|ZP_17456924.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-2]
gi|401149239|gb|EJQ56714.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-2]
Length = 465
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/486 (42%), Positives = 287/486 (59%), Gaps = 31/486 (6%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P E KV MYVCG T Y+ HIG+AR + FD + RYL + GY+V Y
Sbjct: 5 IYNTLTRQKEEFMPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYDVQY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDK+I ANELGED +++ R+ E + +D+ L C +V PRV+++M II+
Sbjct: 65 VSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++++ G+AY +GDVYF +F YG+LS + + D R G R+ V +K++P DFALW
Sbjct: 125 FIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AKEGE FWESPWG GRPGWHIECSAM+ YLG + DIH GG DL FPHHENEIAQS A
Sbjct: 185 KAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ YW+HNG++ ID+EKMSKSLGNF + +++ Y P +R F++ HYR PIN+
Sbjct: 245 LTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINF 304
Query: 378 SVVQLESAS---ERIFYIYQTL-HDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
S L+S + ERI Y L H E + +L D + + KF F +
Sbjct: 305 SEELLQSTNNGLERIKTAYGNLKHRMESSANLTDH-------NEKWLAEMEKFQAAFEEA 357
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DD +T + L + N L K + A K + + +LGL
Sbjct: 358 MDDDFNTANAITELYNVANHANQYLLEEHTSKVV-----IGAYVKQLETLFDILGL---- 408
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
L + +L ++++ I+ R ARKN+++ SD IR DL I L D+
Sbjct: 409 -----------ELAQEELLDEEIETLIQKRIEARKNRDFALSDQIRDDLKERNIILEDTA 457
Query: 554 VGTTWR 559
GT W+
Sbjct: 458 QGTRWK 463
>gi|289422515|ref|ZP_06424358.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
gi|429727475|ref|ZP_19262243.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius VPI 4330]
gi|289157087|gb|EFD05709.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
gi|429152244|gb|EKX95075.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius VPI 4330]
Length = 467
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/486 (41%), Positives = 295/486 (60%), Gaps = 27/486 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNTM+RK+E P EGKV MYVCG T Y+ H+G+AR + FD L RY + GYEV Y
Sbjct: 3 VYNTMTRKKEEFIPLEEGKVKMYVCGPTVYNFIHLGNARPFTVFDTLRRYFEYRGYEVTY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII R++E G P ++ +Y +E+ D L +V P+V+D++ II
Sbjct: 63 VQNFTDVDDKIIKRSHEEGISPEEVAEKYIKEYFIDCDGLGIKRATVHPQVTDNIKEIIS 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++D G+AY +GDV F +F EYG+LS + +E+ G R+ VD +K++P DF LW
Sbjct: 123 FIQDLVDKGYAYESNGDVLFRTREFKEYGKLSHQNIEELELGARIDVDDKKEDPLDFVLW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ K+GEP W+SPWG GRPGWHIECS MS+ YLG++ DIH GG DL FPHHENEIAQS
Sbjct: 183 KAKKDGEPGWKSPWGEGRPGWHIECSVMSSRYLGNTIDIHAGGQDLQFPHHENEIAQS-- 240
Query: 318 ACNNSHI--SYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
C N H+ +YW+HNG++ +D EKMSKSLGNFFT+R++ E Y +R FL+ THYR+P+
Sbjct: 241 ECRNGHVFANYWMHNGYINVDGEKMSKSLGNFFTVREIAEKYDLGLVRFFLLSTHYRNPV 300
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDT--VTSINKFHNDFLAS 433
N+S L+ A + + + E +S L+ + P +T V +N + F+ +
Sbjct: 301 NFSDTILDQAKAGLERLTNARDNAEFMMSKLEDTKMS---PEETGLVDELNSYKTKFIEA 357
Query: 434 MSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTG 493
M DDL+T+ ++A+ + K +N + K+ L + N LT
Sbjct: 358 MDDDLNTSDAISAIFELAKFMNTNIKDTSSKE-------FIGLNIDLFNELT-------- 402
Query: 494 YSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSP 553
+L + K+++ D V + I R A+KNK++ +D IR++L +GI + D+
Sbjct: 403 ---GVLNIANKSVEENDDLARTVEEMIAKRAEAKKNKDFALADKIREELLEMGIVIEDTR 459
Query: 554 VGTTWR 559
G W+
Sbjct: 460 QGVKWK 465
>gi|163783157|ref|ZP_02178151.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881491|gb|EDP75001.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 489
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/490 (42%), Positives = 296/490 (60%), Gaps = 13/490 (2%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
++NT++ K E P KV +Y CGVT YD SH+GH R + FD R+L HLGY+V +
Sbjct: 3 IHNTLTGKVEEFVPVNPPKVLIYTCGVTVYDDSHVGHGRSLIVFDTFRRFLEHLGYDVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
VRNFTDVDDKII RA E D ++++ RY +++DM + P VEPRV++HM I+D
Sbjct: 63 VRNFTDVDDKIINRAKEECTDFMTIANRYIASYYRDMEAIRVKPADVEPRVTEHMKEIVD 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+I +++ G+AY DGDVYFSV F +YG+LS R E+ AG RV +K++P DFALW
Sbjct: 123 VIQSLIEKGYAYESDGDVYFSVRSFKDYGKLSKRSPEEMEAGARVEPSEKKRDPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
KSAK GEP W+SPWG GRPGWH EC AM +LG + DIHGGG+DLVFPHHENEIAQ+ A
Sbjct: 183 KSAKAGEPSWDSPWGKGRPGWHTECVAMIFKHLGETIDIHGGGLDLVFPHHENEIAQAEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
YW+HNG VT+ +KMSKSLGN+ T++++ YHP LRL ++ THYRSP+++
Sbjct: 243 VTGKPFARYWMHNGLVTVGGQKMSKSLGNYVTLKEIYTKYHPDILRLLVLFTHYRSPLDF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S ++E + + D E L L+ K P + + F S+SDD
Sbjct: 303 SWEKMEETQRAYDRLKGAIEDYE-VLKELEVIPGKGGAHP-LYDKVKEVEESFFESLSDD 360
Query: 438 LHTTVVLAALSDPLKTINDL--LHTRKGKKQAMRLESLAALEKTIRNVLTVL----GLMS 491
+T ALS +++L + R + + L A E R +L L GL+
Sbjct: 361 FNTP---EALSHIFSLVSELGKVKNRTYSEGKIDESELGAYEYASRFLLNTLKKIFGLLE 417
Query: 492 TGYSEV-LLQLREKALKRADLTEDQVLQ-RIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
Y E + ++ E+ L+ ++ + +++ IE RT+AR+ K++ +D IR L +GI L
Sbjct: 418 DLYPECEVRRVVERELEAGEVLDTKLVDLLIEVRTLARQEKQFRIADLIRDRLKELGIEL 477
Query: 550 MDSPVGTTWR 559
D+P GT W+
Sbjct: 478 EDTPAGTRWK 487
>gi|110640787|ref|YP_668515.1| cysteinyl-tRNA synthetase [Escherichia coli 536]
gi|123344273|sp|Q0TKB5.1|SYC_ECOL5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|110342379|gb|ABG68616.1| cysteinyl-tRNA synthetase [Escherichia coli 536]
Length = 461
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGLYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|113867241|ref|YP_725730.1| cysteinyl-tRNA synthetase [Ralstonia eutropha H16]
gi|123134207|sp|Q0KCA9.1|SYC_CUPNH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113526017|emb|CAJ92362.1| Cysteinyl-tRNA synthetase [Ralstonia eutropha H16]
Length = 462
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/490 (44%), Positives = 286/490 (58%), Gaps = 39/490 (7%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R+++ P GKV MYVCG+T YD H+GHARV V FD+++R+LR GYEV Y
Sbjct: 6 IYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGYEVTY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+N TD+DDKII RA E GE L+ R+ + H+D L + P EPR +D++P ++D
Sbjct: 66 VQNITDIDDKIIRRAAENGETIGELTTRFIQYMHEDAAALGVIRPDHEPRATDYVPQMLD 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ G AY+ DGDV +SV KF YG+LSG+ LED RAGERV+ + K++P DF L
Sbjct: 126 MIGKLEAKGLAYQASDGDVNYSVRKFAGYGKLSGKSLEDLRAGERVSANDAKQDPLDFVL 185
Query: 257 WKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIA 313
WKSAK EP W+S WG GRPGWHIECSAMS LG FDIHGGG DL FPHHENEIA
Sbjct: 186 WKSAKASEPPESKWDSKWGAGRPGWHIECSAMSCTLLGEHFDIHGGGADLQFPHHENEIA 245
Query: 314 QSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
QS A ++ W+HNGFV I+ EKMSKSLGNFFTIR+V++ Y +R F++ HYRS
Sbjct: 246 QSEGASGKPFVNMWMHNGFVRINDEKMSKSLGNFFTIREVLKSYDAEVVRFFILRAHYRS 305
Query: 374 PINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDFLA 432
P+NYS L+ A + +Y ALKDS P ++ H F
Sbjct: 306 PLNYSDAHLDDARHALTRLY---------------TALKDSQPGGCAVDWDEPHARRFAE 350
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T + ++ L D IN R G A R ++ + LGL+
Sbjct: 351 AMGDDFNTPIAMSVLFDLASEIN-----RTGSTAAAR---------QLKGLAGTLGLLER 396
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
L R ++ +Q+ I R A+ + + ++D IR L GI L D
Sbjct: 397 DPHTFLQGGRSD----DGISPEQIETLIAARKTAKVERNFAEADRIRAQLLEAGIVLEDK 452
Query: 553 PVGTT-WRPA 561
P G T WR A
Sbjct: 453 PGGATEWRRA 462
>gi|422835304|ref|ZP_16883360.1| cysteinyl-tRNA synthetase [Escherichia coli E101]
gi|371612695|gb|EHO01202.1| cysteinyl-tRNA synthetase [Escherichia coli E101]
Length = 461
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P ++PR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMQPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLHEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|238785350|ref|ZP_04629338.1| Cysteinyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
gi|238713741|gb|EEQ05765.1| Cysteinyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
Length = 461
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/491 (44%), Positives = 289/491 (58%), Gaps = 40/491 (8%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EPR + H+P I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENSETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ +++ AY +GDV F+VD P+YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELVERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM++ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L + + A +F F A+M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDANAAPAGGA---------------EFEARFRAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAA---LEKTIRNVLTVLGLMS 491
DD +T + L D + +N L + E +AA L +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDIAREVNRL-----------KTEDIAAANGLAAELRKLAHVLGLLE 395
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIA 548
E+ LQ A D+V + I+ R AR +K++ +D+ R L +GI
Sbjct: 396 QD-PELFLQ------SGAQTDGDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIV 448
Query: 549 LMDSPVGTTWR 559
L D P GTTWR
Sbjct: 449 LEDGPQGTTWR 459
>gi|365175135|ref|ZP_09362573.1| cysteine-tRNA ligase [Synergistes sp. 3_1_syn1]
gi|363614000|gb|EHL65505.1| cysteine-tRNA ligase [Synergistes sp. 3_1_syn1]
Length = 468
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/487 (44%), Positives = 291/487 (59%), Gaps = 21/487 (4%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN ++R +E P EGKV YVCG T Y+ HIG+AR +V FDV RYL LGYEV
Sbjct: 3 LAVYNDLTRTKEKFIPLEEGKVRFYVCGPTVYNFFHIGNARPFVLFDVFRRYLESLGYEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YV+NFTD+DDK+I RANE G L+ R+ E+++D L +V PR + + I
Sbjct: 63 KYVQNFTDIDDKMIKRANEDGITVAELAERFIAEYYKDADALGIRRATVNPRATHEIAAI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
I++I +++ G AY VDGDVYFSV F EYG+LS + +++ +G R+ VD RK+ P DFA
Sbjct: 123 IEIIEALIEKGHAYEVDGDVYFSVASFSEYGKLSKQSVDELLSGARIDVDERKQQPLDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWKSAK GEP W+SPWGPGRPGWHIECSAMS YLG + DIHGGG DL+FPHHENEIAQS
Sbjct: 183 LWKSAKPGEPAWDSPWGPGRPGWHIECSAMSTKYLGKTIDIHGGGSDLIFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A N + YW+HN ++ ID EKMSKSLGNF T+R V + +PL LR FL HYRSP+
Sbjct: 243 ECANNAQFVKYWLHNAYLLIDKEKMSKSLGNFLTVRDVSQKVNPLVLRFFLASVHYRSPL 302
Query: 376 NYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMS 435
N+S LE A + + D AL A +++ ++ F A+M
Sbjct: 303 NFSPEGLEQAKAALERLNNCYADMLFALENRAAGEADEALR----AAVKGSEEGFTAAMD 358
Query: 436 DDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYS 495
DD +T + + + ++ +N L + + E+ A EKT N+L L Y
Sbjct: 359 DDFNTAGAVGCIFEMVRAVNVHLTEHQEIDKEALTEAKALFEKT-DNILGYL------YE 411
Query: 496 EVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVG 555
E K A E ++ + +RT ARK K +++SD IR LAA G+ + D+P G
Sbjct: 412 E----------KEAGDEESEIDALVAERTEARKAKNFKRSDEIRDLLAAKGVVIEDTPQG 461
Query: 556 TTWRPAL 562
W+ L
Sbjct: 462 PRWKRTL 468
>gi|15800263|ref|NP_286275.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
gi|15829842|ref|NP_308615.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|168747790|ref|ZP_02772812.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
gi|168754640|ref|ZP_02779647.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
gi|168768489|ref|ZP_02793496.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
gi|168774602|ref|ZP_02799609.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
gi|168779029|ref|ZP_02804036.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
gi|168786387|ref|ZP_02811394.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC869]
gi|195936093|ref|ZP_03081475.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
gi|208808572|ref|ZP_03250909.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
gi|208815777|ref|ZP_03256956.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
gi|208822926|ref|ZP_03263244.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
gi|209397071|ref|YP_002269179.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
gi|217324178|ref|ZP_03440262.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
gi|254791714|ref|YP_003076551.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
gi|261224014|ref|ZP_05938295.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
gi|261257708|ref|ZP_05950241.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
gi|291281437|ref|YP_003498255.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
gi|387505547|ref|YP_006157803.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
gi|387881125|ref|YP_006311427.1| cysteinyl-tRNA synthetase [Escherichia coli Xuzhou21]
gi|416313090|ref|ZP_11658025.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
gi|416316906|ref|ZP_11660038.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
gi|416325524|ref|ZP_11665932.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
gi|416780688|ref|ZP_11876986.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|416791781|ref|ZP_11881885.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|416803464|ref|ZP_11886776.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|416814018|ref|ZP_11891462.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97]
gi|416824091|ref|ZP_11895980.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|416835122|ref|ZP_11901349.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|419043251|ref|ZP_13590227.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3A]
gi|419049144|ref|ZP_13596061.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3B]
gi|419055199|ref|ZP_13602055.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3C]
gi|419060792|ref|ZP_13607576.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3D]
gi|419066698|ref|ZP_13613352.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3E]
gi|419073826|ref|ZP_13619398.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3F]
gi|419078890|ref|ZP_13624373.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4A]
gi|419084511|ref|ZP_13629925.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4B]
gi|419090569|ref|ZP_13635888.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4C]
gi|419096679|ref|ZP_13641923.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4D]
gi|419102276|ref|ZP_13647442.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4E]
gi|419107627|ref|ZP_13652737.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4F]
gi|419113393|ref|ZP_13658428.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5A]
gi|419118975|ref|ZP_13663959.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5B]
gi|419127178|ref|ZP_13672057.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5C]
gi|419130196|ref|ZP_13675049.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5D]
gi|419134957|ref|ZP_13679765.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
gi|420267922|ref|ZP_14770329.1| cysteine--tRNA ligase [Escherichia coli PA22]
gi|420273603|ref|ZP_14775936.1| cysteine--tRNA ligase [Escherichia coli PA40]
gi|420278692|ref|ZP_14780959.1| cysteine--tRNA ligase [Escherichia coli TW06591]
gi|420286388|ref|ZP_14788591.1| cysteine--tRNA ligase [Escherichia coli TW10246]
gi|420290673|ref|ZP_14792838.1| cysteine--tRNA ligase [Escherichia coli TW11039]
gi|420296512|ref|ZP_14798607.1| cysteine--tRNA ligase [Escherichia coli TW09109]
gi|420302486|ref|ZP_14804516.1| cysteine--tRNA ligase [Escherichia coli TW10119]
gi|420308017|ref|ZP_14809990.1| cysteine--tRNA ligase [Escherichia coli EC1738]
gi|420313272|ref|ZP_14815180.1| cysteine--tRNA ligase [Escherichia coli EC1734]
gi|421810767|ref|ZP_16246576.1| cysteine--tRNA ligase [Escherichia coli 8.0416]
gi|421816855|ref|ZP_16252417.1| cysteine--tRNA ligase [Escherichia coli 10.0821]
gi|421822243|ref|ZP_16257680.1| cysteine--tRNA ligase [Escherichia coli FRIK920]
gi|421828974|ref|ZP_16264303.1| cysteine--tRNA ligase [Escherichia coli PA7]
gi|423658502|ref|ZP_17633799.1| cysteine--tRNA ligase [Escherichia coli PA31]
gi|424075405|ref|ZP_17812766.1| cysteine--tRNA ligase [Escherichia coli FDA505]
gi|424081733|ref|ZP_17818606.1| cysteine--tRNA ligase [Escherichia coli FDA517]
gi|424088357|ref|ZP_17824627.1| cysteine--tRNA ligase [Escherichia coli FRIK1996]
gi|424094572|ref|ZP_17830344.1| cysteine--tRNA ligase [Escherichia coli FRIK1985]
gi|424100974|ref|ZP_17836150.1| cysteine--tRNA ligase [Escherichia coli FRIK1990]
gi|424107789|ref|ZP_17842381.1| cysteine--tRNA ligase [Escherichia coli 93-001]
gi|424113778|ref|ZP_17847942.1| cysteine--tRNA ligase [Escherichia coli PA3]
gi|424119840|ref|ZP_17853566.1| cysteine--tRNA ligase [Escherichia coli PA5]
gi|424126095|ref|ZP_17859310.1| cysteine--tRNA ligase [Escherichia coli PA9]
gi|424138726|ref|ZP_17871035.1| cysteine--tRNA ligase [Escherichia coli PA14]
gi|424145170|ref|ZP_17876954.1| cysteine--tRNA ligase [Escherichia coli PA15]
gi|424151314|ref|ZP_17882582.1| cysteine--tRNA ligase [Escherichia coli PA24]
gi|424185053|ref|ZP_17888017.1| cysteine--tRNA ligase [Escherichia coli PA25]
gi|424267094|ref|ZP_17893917.1| cysteine--tRNA ligase [Escherichia coli PA28]
gi|424422510|ref|ZP_17899647.1| cysteine--tRNA ligase [Escherichia coli PA32]
gi|424453720|ref|ZP_17905272.1| cysteine--tRNA ligase [Escherichia coli PA33]
gi|424460023|ref|ZP_17910974.1| cysteine--tRNA ligase [Escherichia coli PA39]
gi|424466492|ref|ZP_17916695.1| cysteine--tRNA ligase [Escherichia coli PA41]
gi|424473053|ref|ZP_17922742.1| cysteine--tRNA ligase [Escherichia coli PA42]
gi|424479001|ref|ZP_17928261.1| cysteine--tRNA ligase [Escherichia coli TW07945]
gi|424485067|ref|ZP_17933948.1| cysteine--tRNA ligase [Escherichia coli TW09098]
gi|424491202|ref|ZP_17939604.1| cysteine--tRNA ligase [Escherichia coli TW09195]
gi|424498277|ref|ZP_17945566.1| cysteine--tRNA ligase [Escherichia coli EC4203]
gi|424504513|ref|ZP_17951304.1| cysteine--tRNA ligase [Escherichia coli EC4196]
gi|424510767|ref|ZP_17957015.1| cysteine--tRNA ligase [Escherichia coli TW14313]
gi|424518332|ref|ZP_17962776.1| cysteine--tRNA ligase [Escherichia coli TW14301]
gi|424524165|ref|ZP_17968202.1| cysteine--tRNA ligase [Escherichia coli EC4421]
gi|424530371|ref|ZP_17974013.1| cysteine--tRNA ligase [Escherichia coli EC4422]
gi|424536346|ref|ZP_17979623.1| cysteine--tRNA ligase [Escherichia coli EC4013]
gi|424542256|ref|ZP_17985089.1| cysteine--tRNA ligase [Escherichia coli EC4402]
gi|424548576|ref|ZP_17990797.1| cysteine--tRNA ligase [Escherichia coli EC4439]
gi|424554844|ref|ZP_17996577.1| cysteine--tRNA ligase [Escherichia coli EC4436]
gi|424561189|ref|ZP_18002488.1| cysteine--tRNA ligase [Escherichia coli EC4437]
gi|424567218|ref|ZP_18008147.1| cysteine--tRNA ligase [Escherichia coli EC4448]
gi|424573404|ref|ZP_18013842.1| cysteine--tRNA ligase [Escherichia coli EC1845]
gi|424579358|ref|ZP_18019305.1| cysteine--tRNA ligase [Escherichia coli EC1863]
gi|425096036|ref|ZP_18499072.1| cysteine--tRNA ligase [Escherichia coli 3.4870]
gi|425102172|ref|ZP_18504834.1| cysteine--tRNA ligase [Escherichia coli 5.2239]
gi|425107971|ref|ZP_18510235.1| cysteine--tRNA ligase [Escherichia coli 6.0172]
gi|425123800|ref|ZP_18525390.1| cysteine--tRNA ligase [Escherichia coli 8.0586]
gi|425129836|ref|ZP_18530948.1| cysteine--tRNA ligase [Escherichia coli 8.2524]
gi|425136173|ref|ZP_18536909.1| cysteine--tRNA ligase [Escherichia coli 10.0833]
gi|425142078|ref|ZP_18542378.1| cysteine--tRNA ligase [Escherichia coli 10.0869]
gi|425148392|ref|ZP_18548299.1| cysteine--tRNA ligase [Escherichia coli 88.0221]
gi|425154011|ref|ZP_18553571.1| cysteine--tRNA ligase [Escherichia coli PA34]
gi|425160458|ref|ZP_18559645.1| cysteine--tRNA ligase [Escherichia coli FDA506]
gi|425165967|ref|ZP_18564789.1| cysteine--tRNA ligase [Escherichia coli FDA507]
gi|425172262|ref|ZP_18570672.1| cysteine--tRNA ligase [Escherichia coli FDA504]
gi|425184291|ref|ZP_18581927.1| cysteine--tRNA ligase [Escherichia coli FRIK1997]
gi|425191041|ref|ZP_18588181.1| cysteine--tRNA ligase [Escherichia coli NE1487]
gi|425197374|ref|ZP_18594036.1| cysteine--tRNA ligase [Escherichia coli NE037]
gi|425204032|ref|ZP_18600173.1| cysteine--tRNA ligase [Escherichia coli FRIK2001]
gi|425209788|ref|ZP_18605535.1| cysteine--tRNA ligase [Escherichia coli PA4]
gi|425215828|ref|ZP_18611158.1| cysteine--tRNA ligase [Escherichia coli PA23]
gi|425222402|ref|ZP_18617272.1| cysteine--tRNA ligase [Escherichia coli PA49]
gi|425228643|ref|ZP_18623050.1| cysteine--tRNA ligase [Escherichia coli PA45]
gi|425234944|ref|ZP_18628916.1| cysteine--tRNA ligase [Escherichia coli TT12B]
gi|425240946|ref|ZP_18634592.1| cysteine--tRNA ligase [Escherichia coli MA6]
gi|425247066|ref|ZP_18640288.1| cysteine--tRNA ligase [Escherichia coli 5905]
gi|425252799|ref|ZP_18645688.1| cysteine--tRNA ligase [Escherichia coli CB7326]
gi|425259111|ref|ZP_18651486.1| cysteine--tRNA ligase [Escherichia coli EC96038]
gi|425265214|ref|ZP_18657146.1| cysteine--tRNA ligase [Escherichia coli 5412]
gi|425292673|ref|ZP_18683266.1| cysteine--tRNA ligase [Escherichia coli PA38]
gi|425309409|ref|ZP_18698886.1| cysteine--tRNA ligase [Escherichia coli EC1735]
gi|425315327|ref|ZP_18704413.1| cysteine--tRNA ligase [Escherichia coli EC1736]
gi|425321382|ref|ZP_18710063.1| cysteine--tRNA ligase [Escherichia coli EC1737]
gi|425327573|ref|ZP_18715806.1| cysteine--tRNA ligase [Escherichia coli EC1846]
gi|425333759|ref|ZP_18721490.1| cysteine--tRNA ligase [Escherichia coli EC1847]
gi|425340177|ref|ZP_18727429.1| cysteine--tRNA ligase [Escherichia coli EC1848]
gi|425346052|ref|ZP_18732864.1| cysteine--tRNA ligase [Escherichia coli EC1849]
gi|425352271|ref|ZP_18738660.1| cysteine--tRNA ligase [Escherichia coli EC1850]
gi|425358264|ref|ZP_18744246.1| cysteine--tRNA ligase [Escherichia coli EC1856]
gi|425364367|ref|ZP_18749927.1| cysteine--tRNA ligase [Escherichia coli EC1862]
gi|425370818|ref|ZP_18755789.1| cysteine--tRNA ligase [Escherichia coli EC1864]
gi|425383609|ref|ZP_18767497.1| cysteine--tRNA ligase [Escherichia coli EC1866]
gi|425390305|ref|ZP_18773773.1| cysteine--tRNA ligase [Escherichia coli EC1868]
gi|425396427|ref|ZP_18779482.1| cysteine--tRNA ligase [Escherichia coli EC1869]
gi|425402413|ref|ZP_18785025.1| cysteine--tRNA ligase [Escherichia coli EC1870]
gi|425408952|ref|ZP_18791116.1| cysteine--tRNA ligase [Escherichia coli NE098]
gi|425415230|ref|ZP_18796876.1| cysteine--tRNA ligase [Escherichia coli FRIK523]
gi|425426375|ref|ZP_18807433.1| cysteine--tRNA ligase [Escherichia coli 0.1304]
gi|428945035|ref|ZP_19017687.1| cysteine--tRNA ligase [Escherichia coli 88.1467]
gi|428951187|ref|ZP_19023326.1| cysteine--tRNA ligase [Escherichia coli 88.1042]
gi|428957044|ref|ZP_19028746.1| cysteine--tRNA ligase [Escherichia coli 89.0511]
gi|428963369|ref|ZP_19034561.1| cysteine--tRNA ligase [Escherichia coli 90.0091]
gi|428969533|ref|ZP_19040172.1| cysteine--tRNA ligase [Escherichia coli 90.0039]
gi|428975982|ref|ZP_19046160.1| cysteine--tRNA ligase [Escherichia coli 90.2281]
gi|428981706|ref|ZP_19051446.1| cysteine--tRNA ligase [Escherichia coli 93.0055]
gi|428987987|ref|ZP_19057283.1| cysteine--tRNA ligase [Escherichia coli 93.0056]
gi|428993801|ref|ZP_19062712.1| cysteine--tRNA ligase [Escherichia coli 94.0618]
gi|428999904|ref|ZP_19068415.1| cysteine--tRNA ligase [Escherichia coli 95.0183]
gi|429006146|ref|ZP_19074062.1| cysteine--tRNA ligase [Escherichia coli 95.1288]
gi|429012485|ref|ZP_19079742.1| cysteine--tRNA ligase [Escherichia coli 95.0943]
gi|429018693|ref|ZP_19085479.1| cysteine--tRNA ligase [Escherichia coli 96.0428]
gi|429024374|ref|ZP_19090790.1| cysteine--tRNA ligase [Escherichia coli 96.0427]
gi|429030691|ref|ZP_19096572.1| cysteine--tRNA ligase [Escherichia coli 96.0939]
gi|429036880|ref|ZP_19102323.1| cysteine--tRNA ligase [Escherichia coli 96.0932]
gi|429042795|ref|ZP_19107804.1| cysteine--tRNA ligase [Escherichia coli 96.0107]
gi|429048599|ref|ZP_19113258.1| cysteine--tRNA ligase [Escherichia coli 97.0003]
gi|429053964|ref|ZP_19118457.1| cysteine--tRNA ligase [Escherichia coli 97.1742]
gi|429059639|ref|ZP_19123787.1| cysteine--tRNA ligase [Escherichia coli 97.0007]
gi|429065104|ref|ZP_19128968.1| cysteine--tRNA ligase [Escherichia coli 99.0672]
gi|429071666|ref|ZP_19135022.1| cysteine--tRNA ligase [Escherichia coli 99.0678]
gi|429076986|ref|ZP_19140205.1| cysteine--tRNA ligase [Escherichia coli 99.0713]
gi|429824162|ref|ZP_19355669.1| cysteine--tRNA ligase [Escherichia coli 96.0109]
gi|429830525|ref|ZP_19361385.1| cysteine--tRNA ligase [Escherichia coli 97.0010]
gi|444922864|ref|ZP_21242583.1| cysteine--tRNA ligase [Escherichia coli 09BKT078844]
gi|444929179|ref|ZP_21248332.1| cysteine--tRNA ligase [Escherichia coli 99.0814]
gi|444934530|ref|ZP_21253473.1| cysteine--tRNA ligase [Escherichia coli 99.0815]
gi|444940108|ref|ZP_21258756.1| cysteine--tRNA ligase [Escherichia coli 99.0816]
gi|444945697|ref|ZP_21264118.1| cysteine--tRNA ligase [Escherichia coli 99.0839]
gi|444951256|ref|ZP_21269481.1| cysteine--tRNA ligase [Escherichia coli 99.0848]
gi|444962013|ref|ZP_21279766.1| cysteine--tRNA ligase [Escherichia coli 99.1775]
gi|444967744|ref|ZP_21285220.1| cysteine--tRNA ligase [Escherichia coli 99.1793]
gi|444973246|ref|ZP_21290528.1| cysteine--tRNA ligase [Escherichia coli 99.1805]
gi|444978787|ref|ZP_21295783.1| cysteine--tRNA ligase [Escherichia coli ATCC 700728]
gi|444984081|ref|ZP_21300950.1| cysteine--tRNA ligase [Escherichia coli PA11]
gi|444989325|ref|ZP_21306065.1| cysteine--tRNA ligase [Escherichia coli PA19]
gi|444994678|ref|ZP_21311274.1| cysteine--tRNA ligase [Escherichia coli PA13]
gi|445000176|ref|ZP_21316639.1| cysteine--tRNA ligase [Escherichia coli PA2]
gi|445005633|ref|ZP_21321973.1| cysteine--tRNA ligase [Escherichia coli PA47]
gi|445010804|ref|ZP_21326996.1| cysteine--tRNA ligase [Escherichia coli PA48]
gi|445016582|ref|ZP_21332632.1| cysteine--tRNA ligase [Escherichia coli PA8]
gi|445022033|ref|ZP_21337955.1| cysteine--tRNA ligase [Escherichia coli 7.1982]
gi|445027273|ref|ZP_21343052.1| cysteine--tRNA ligase [Escherichia coli 99.1781]
gi|445032769|ref|ZP_21348394.1| cysteine--tRNA ligase [Escherichia coli 99.1762]
gi|445038463|ref|ZP_21353933.1| cysteine--tRNA ligase [Escherichia coli PA35]
gi|445043676|ref|ZP_21359015.1| cysteine--tRNA ligase [Escherichia coli 3.4880]
gi|445049249|ref|ZP_21364418.1| cysteine--tRNA ligase [Escherichia coli 95.0083]
gi|445054899|ref|ZP_21369851.1| cysteine--tRNA ligase [Escherichia coli 99.0670]
gi|452969873|ref|ZP_21968100.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4009]
gi|21264001|sp|Q8XCT9.1|SYC_ECO57 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710840|sp|B5YPP1.1|SYC_ECO5E RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|12513423|gb|AAG54883.1|AE005233_9 cysteine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
gi|13360046|dbj|BAB34011.1| cysteine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|187769725|gb|EDU33569.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
gi|188017727|gb|EDU55849.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
gi|189003129|gb|EDU72115.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
gi|189357976|gb|EDU76395.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
gi|189362536|gb|EDU80955.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
gi|189373672|gb|EDU92088.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC869]
gi|208728373|gb|EDZ77974.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
gi|208732425|gb|EDZ81113.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
gi|208737119|gb|EDZ84803.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
gi|209158471|gb|ACI35904.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
gi|209777878|gb|ACI87251.1| cysteine tRNA synthetase [Escherichia coli]
gi|209777880|gb|ACI87252.1| cysteine tRNA synthetase [Escherichia coli]
gi|209777882|gb|ACI87253.1| cysteine tRNA synthetase [Escherichia coli]
gi|209777884|gb|ACI87254.1| cysteine tRNA synthetase [Escherichia coli]
gi|209777886|gb|ACI87255.1| cysteine tRNA synthetase [Escherichia coli]
gi|217320399|gb|EEC28823.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
gi|254591114|gb|ACT70475.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
gi|290761310|gb|ADD55271.1| Cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
gi|320192951|gb|EFW67591.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
gi|320638305|gb|EFX08030.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|320643709|gb|EFX12839.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|320649025|gb|EFX17612.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|320654603|gb|EFX22608.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320660389|gb|EFX27860.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|320665083|gb|EFX32180.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|326341299|gb|EGD65091.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
gi|326345924|gb|EGD69663.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
gi|374357541|gb|AEZ39248.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
gi|377900868|gb|EHU65194.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3A]
gi|377901968|gb|EHU66277.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3B]
gi|377913697|gb|EHU77829.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3C]
gi|377918173|gb|EHU82224.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3D]
gi|377920349|gb|EHU84370.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3E]
gi|377931796|gb|EHU95655.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3F]
gi|377933977|gb|EHU97817.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4A]
gi|377939220|gb|EHV02976.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4B]
gi|377949522|gb|EHV13154.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4C]
gi|377951579|gb|EHV15198.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4D]
gi|377954097|gb|EHV17657.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4E]
gi|377966184|gb|EHV29597.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5A]
gi|377967498|gb|EHV30904.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4F]
gi|377973176|gb|EHV36519.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5B]
gi|377973203|gb|EHV36545.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5C]
gi|377981570|gb|EHV44829.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5D]
gi|377987963|gb|EHV51146.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
gi|386794583|gb|AFJ27617.1| cysteinyl-tRNA synthetase [Escherichia coli Xuzhou21]
gi|390650777|gb|EIN29167.1| cysteine--tRNA ligase [Escherichia coli FRIK1996]
gi|390652731|gb|EIN30916.1| cysteine--tRNA ligase [Escherichia coli FDA517]
gi|390653268|gb|EIN31426.1| cysteine--tRNA ligase [Escherichia coli FDA505]
gi|390669715|gb|EIN46323.1| cysteine--tRNA ligase [Escherichia coli 93-001]
gi|390672808|gb|EIN49069.1| cysteine--tRNA ligase [Escherichia coli FRIK1990]
gi|390673820|gb|EIN50038.1| cysteine--tRNA ligase [Escherichia coli FRIK1985]
gi|390688595|gb|EIN63641.1| cysteine--tRNA ligase [Escherichia coli PA3]
gi|390692098|gb|EIN66808.1| cysteine--tRNA ligase [Escherichia coli PA9]
gi|390692968|gb|EIN67620.1| cysteine--tRNA ligase [Escherichia coli PA5]
gi|390710108|gb|EIN83140.1| cysteine--tRNA ligase [Escherichia coli PA15]
gi|390712657|gb|EIN85608.1| cysteine--tRNA ligase [Escherichia coli PA14]
gi|390720402|gb|EIN93114.1| cysteine--tRNA ligase [Escherichia coli PA22]
gi|390733459|gb|EIO05038.1| cysteine--tRNA ligase [Escherichia coli PA25]
gi|390733640|gb|EIO05207.1| cysteine--tRNA ligase [Escherichia coli PA24]
gi|390736822|gb|EIO08144.1| cysteine--tRNA ligase [Escherichia coli PA28]
gi|390751986|gb|EIO21847.1| cysteine--tRNA ligase [Escherichia coli PA31]
gi|390752574|gb|EIO22402.1| cysteine--tRNA ligase [Escherichia coli PA32]
gi|390754888|gb|EIO24444.1| cysteine--tRNA ligase [Escherichia coli PA33]
gi|390762521|gb|EIO31779.1| cysteine--tRNA ligase [Escherichia coli PA40]
gi|390776062|gb|EIO44031.1| cysteine--tRNA ligase [Escherichia coli PA41]
gi|390777986|gb|EIO45758.1| cysteine--tRNA ligase [Escherichia coli PA42]
gi|390783774|gb|EIO51364.1| cysteine--tRNA ligase [Escherichia coli PA39]
gi|390785666|gb|EIO53208.1| cysteine--tRNA ligase [Escherichia coli TW06591]
gi|390792034|gb|EIO59397.1| cysteine--tRNA ligase [Escherichia coli TW10246]
gi|390801904|gb|EIO68955.1| cysteine--tRNA ligase [Escherichia coli TW11039]
gi|390809673|gb|EIO76456.1| cysteine--tRNA ligase [Escherichia coli TW07945]
gi|390811463|gb|EIO78170.1| cysteine--tRNA ligase [Escherichia coli TW09109]
gi|390819156|gb|EIO85505.1| cysteine--tRNA ligase [Escherichia coli TW10119]
gi|390822915|gb|EIO89000.1| cysteine--tRNA ligase [Escherichia coli TW09098]
gi|390837150|gb|EIP01592.1| cysteine--tRNA ligase [Escherichia coli EC4203]
gi|390839982|gb|EIP04057.1| cysteine--tRNA ligase [Escherichia coli EC4196]
gi|390841823|gb|EIP05710.1| cysteine--tRNA ligase [Escherichia coli TW09195]
gi|390855612|gb|EIP18302.1| cysteine--tRNA ligase [Escherichia coli TW14301]
gi|390859718|gb|EIP22057.1| cysteine--tRNA ligase [Escherichia coli EC4421]
gi|390860107|gb|EIP22433.1| cysteine--tRNA ligase [Escherichia coli TW14313]
gi|390871585|gb|EIP32983.1| cysteine--tRNA ligase [Escherichia coli EC4422]
gi|390876160|gb|EIP37154.1| cysteine--tRNA ligase [Escherichia coli EC4013]
gi|390886063|gb|EIP46217.1| cysteine--tRNA ligase [Escherichia coli EC4402]
gi|390888064|gb|EIP47970.1| cysteine--tRNA ligase [Escherichia coli EC4439]
gi|390894587|gb|EIP54089.1| cysteine--tRNA ligase [Escherichia coli EC4436]
gi|390903720|gb|EIP62761.1| cysteine--tRNA ligase [Escherichia coli EC1738]
gi|390910369|gb|EIP69110.1| cysteine--tRNA ligase [Escherichia coli EC4437]
gi|390911837|gb|EIP70518.1| cysteine--tRNA ligase [Escherichia coli EC1734]
gi|390915057|gb|EIP73580.1| cysteine--tRNA ligase [Escherichia coli EC4448]
gi|390924815|gb|EIP82557.1| cysteine--tRNA ligase [Escherichia coli EC1863]
gi|390926145|gb|EIP83744.1| cysteine--tRNA ligase [Escherichia coli EC1845]
gi|408071980|gb|EKH06305.1| cysteine--tRNA ligase [Escherichia coli PA7]
gi|408075425|gb|EKH09657.1| cysteine--tRNA ligase [Escherichia coli FRIK920]
gi|408086000|gb|EKH19557.1| cysteine--tRNA ligase [Escherichia coli PA34]
gi|408090098|gb|EKH23377.1| cysteine--tRNA ligase [Escherichia coli FDA506]
gi|408095488|gb|EKH28464.1| cysteine--tRNA ligase [Escherichia coli FDA507]
gi|408102441|gb|EKH34850.1| cysteine--tRNA ligase [Escherichia coli FDA504]
gi|408116641|gb|EKH47923.1| cysteine--tRNA ligase [Escherichia coli FRIK1997]
gi|408122122|gb|EKH53006.1| cysteine--tRNA ligase [Escherichia coli NE1487]
gi|408130229|gb|EKH60390.1| cysteine--tRNA ligase [Escherichia coli NE037]
gi|408132284|gb|EKH62273.1| cysteine--tRNA ligase [Escherichia coli FRIK2001]
gi|408141508|gb|EKH70976.1| cysteine--tRNA ligase [Escherichia coli PA4]
gi|408150296|gb|EKH78894.1| cysteine--tRNA ligase [Escherichia coli PA23]
gi|408152772|gb|EKH81193.1| cysteine--tRNA ligase [Escherichia coli PA49]
gi|408158068|gb|EKH86205.1| cysteine--tRNA ligase [Escherichia coli PA45]
gi|408166906|gb|EKH94446.1| cysteine--tRNA ligase [Escherichia coli TT12B]
gi|408172216|gb|EKH99296.1| cysteine--tRNA ligase [Escherichia coli MA6]
gi|408174594|gb|EKI01569.1| cysteine--tRNA ligase [Escherichia coli 5905]
gi|408186998|gb|EKI12991.1| cysteine--tRNA ligase [Escherichia coli CB7326]
gi|408191909|gb|EKI17504.1| cysteine--tRNA ligase [Escherichia coli EC96038]
gi|408191966|gb|EKI17555.1| cysteine--tRNA ligase [Escherichia coli 5412]
gi|408233008|gb|EKI56159.1| cysteine--tRNA ligase [Escherichia coli PA38]
gi|408239030|gb|EKI61795.1| cysteine--tRNA ligase [Escherichia coli EC1735]
gi|408249030|gb|EKI70991.1| cysteine--tRNA ligase [Escherichia coli EC1736]
gi|408253092|gb|EKI74708.1| cysteine--tRNA ligase [Escherichia coli EC1737]
gi|408259490|gb|EKI80667.1| cysteine--tRNA ligase [Escherichia coli EC1846]
gi|408268363|gb|EKI88743.1| cysteine--tRNA ligase [Escherichia coli EC1847]
gi|408269982|gb|EKI90207.1| cysteine--tRNA ligase [Escherichia coli EC1848]
gi|408278886|gb|EKI98561.1| cysteine--tRNA ligase [Escherichia coli EC1849]
gi|408285285|gb|EKJ04329.1| cysteine--tRNA ligase [Escherichia coli EC1850]
gi|408287790|gb|EKJ06641.1| cysteine--tRNA ligase [Escherichia coli EC1856]
gi|408300524|gb|EKJ18217.1| cysteine--tRNA ligase [Escherichia coli EC1862]
gi|408300942|gb|EKJ18617.1| cysteine--tRNA ligase [Escherichia coli EC1864]
gi|408318019|gb|EKJ34244.1| cysteine--tRNA ligase [Escherichia coli EC1868]
gi|408318077|gb|EKJ34294.1| cysteine--tRNA ligase [Escherichia coli EC1866]
gi|408331424|gb|EKJ46595.1| cysteine--tRNA ligase [Escherichia coli EC1869]
gi|408336739|gb|EKJ51489.1| cysteine--tRNA ligase [Escherichia coli NE098]
gi|408338133|gb|EKJ52794.1| cysteine--tRNA ligase [Escherichia coli EC1870]
gi|408350506|gb|EKJ64373.1| cysteine--tRNA ligase [Escherichia coli FRIK523]
gi|408353100|gb|EKJ66624.1| cysteine--tRNA ligase [Escherichia coli 0.1304]
gi|408558784|gb|EKK35142.1| cysteine--tRNA ligase [Escherichia coli 5.2239]
gi|408559209|gb|EKK35551.1| cysteine--tRNA ligase [Escherichia coli 3.4870]
gi|408560107|gb|EKK36388.1| cysteine--tRNA ligase [Escherichia coli 6.0172]
gi|408585274|gb|EKK60165.1| cysteine--tRNA ligase [Escherichia coli 8.0586]
gi|408590183|gb|EKK64674.1| cysteine--tRNA ligase [Escherichia coli 8.2524]
gi|408591951|gb|EKK66355.1| cysteine--tRNA ligase [Escherichia coli 10.0833]
gi|408604153|gb|EKK77745.1| cysteine--tRNA ligase [Escherichia coli 10.0869]
gi|408605733|gb|EKK79226.1| cysteine--tRNA ligase [Escherichia coli 8.0416]
gi|408610407|gb|EKK83779.1| cysteine--tRNA ligase [Escherichia coli 88.0221]
gi|408617074|gb|EKK90201.1| cysteine--tRNA ligase [Escherichia coli 10.0821]
gi|427214570|gb|EKV83868.1| cysteine--tRNA ligase [Escherichia coli 88.1042]
gi|427216846|gb|EKV85939.1| cysteine--tRNA ligase [Escherichia coli 89.0511]
gi|427217114|gb|EKV86187.1| cysteine--tRNA ligase [Escherichia coli 88.1467]
gi|427233881|gb|EKW01600.1| cysteine--tRNA ligase [Escherichia coli 90.2281]
gi|427233952|gb|EKW01662.1| cysteine--tRNA ligase [Escherichia coli 90.0039]
gi|427236143|gb|EKW03739.1| cysteine--tRNA ligase [Escherichia coli 90.0091]
gi|427251392|gb|EKW17971.1| cysteine--tRNA ligase [Escherichia coli 93.0056]
gi|427252944|gb|EKW19403.1| cysteine--tRNA ligase [Escherichia coli 93.0055]
gi|427254045|gb|EKW20420.1| cysteine--tRNA ligase [Escherichia coli 94.0618]
gi|427270248|gb|EKW35139.1| cysteine--tRNA ligase [Escherichia coli 95.0943]
gi|427270732|gb|EKW35605.1| cysteine--tRNA ligase [Escherichia coli 95.0183]
gi|427275842|gb|EKW40436.1| cysteine--tRNA ligase [Escherichia coli 95.1288]
gi|427286257|gb|EKW50113.1| cysteine--tRNA ligase [Escherichia coli 96.0428]
gi|427291969|gb|EKW55334.1| cysteine--tRNA ligase [Escherichia coli 96.0427]
gi|427293714|gb|EKW56954.1| cysteine--tRNA ligase [Escherichia coli 96.0939]
gi|427304690|gb|EKW67320.1| cysteine--tRNA ligase [Escherichia coli 97.0003]
gi|427306228|gb|EKW68767.1| cysteine--tRNA ligase [Escherichia coli 96.0932]
gi|427310676|gb|EKW72913.1| cysteine--tRNA ligase [Escherichia coli 96.0107]
gi|427321491|gb|EKW83180.1| cysteine--tRNA ligase [Escherichia coli 97.1742]
gi|427322234|gb|EKW83875.1| cysteine--tRNA ligase [Escherichia coli 97.0007]
gi|427334224|gb|EKW95301.1| cysteine--tRNA ligase [Escherichia coli 99.0713]
gi|427334272|gb|EKW95345.1| cysteine--tRNA ligase [Escherichia coli 99.0678]
gi|427336753|gb|EKW97707.1| cysteine--tRNA ligase [Escherichia coli 99.0672]
gi|429260091|gb|EKY43702.1| cysteine--tRNA ligase [Escherichia coli 96.0109]
gi|429261797|gb|EKY45196.1| cysteine--tRNA ligase [Escherichia coli 97.0010]
gi|444542382|gb|ELV21747.1| cysteine--tRNA ligase [Escherichia coli 99.0814]
gi|444550651|gb|ELV28705.1| cysteine--tRNA ligase [Escherichia coli 09BKT078844]
gi|444551750|gb|ELV29635.1| cysteine--tRNA ligase [Escherichia coli 99.0815]
gi|444564861|gb|ELV41771.1| cysteine--tRNA ligase [Escherichia coli 99.0839]
gi|444567061|gb|ELV43837.1| cysteine--tRNA ligase [Escherichia coli 99.0816]
gi|444571215|gb|ELV47705.1| cysteine--tRNA ligase [Escherichia coli 99.0848]
gi|444585099|gb|ELV60684.1| cysteine--tRNA ligase [Escherichia coli 99.1775]
gi|444586042|gb|ELV61570.1| cysteine--tRNA ligase [Escherichia coli 99.1793]
gi|444599674|gb|ELV74539.1| cysteine--tRNA ligase [Escherichia coli ATCC 700728]
gi|444600191|gb|ELV75035.1| cysteine--tRNA ligase [Escherichia coli PA11]
gi|444608265|gb|ELV82805.1| cysteine--tRNA ligase [Escherichia coli 99.1805]
gi|444614298|gb|ELV88527.1| cysteine--tRNA ligase [Escherichia coli PA13]
gi|444615064|gb|ELV89283.1| cysteine--tRNA ligase [Escherichia coli PA19]
gi|444623354|gb|ELV97283.1| cysteine--tRNA ligase [Escherichia coli PA2]
gi|444632495|gb|ELW06063.1| cysteine--tRNA ligase [Escherichia coli PA48]
gi|444632775|gb|ELW06329.1| cysteine--tRNA ligase [Escherichia coli PA47]
gi|444637518|gb|ELW10891.1| cysteine--tRNA ligase [Escherichia coli PA8]
gi|444647524|gb|ELW20489.1| cysteine--tRNA ligase [Escherichia coli 7.1982]
gi|444650033|gb|ELW22890.1| cysteine--tRNA ligase [Escherichia coli 99.1781]
gi|444653772|gb|ELW26479.1| cysteine--tRNA ligase [Escherichia coli 99.1762]
gi|444662515|gb|ELW34768.1| cysteine--tRNA ligase [Escherichia coli PA35]
gi|444667131|gb|ELW39178.1| cysteine--tRNA ligase [Escherichia coli 3.4880]
gi|444672647|gb|ELW44344.1| cysteine--tRNA ligase [Escherichia coli 95.0083]
gi|444674421|gb|ELW45960.1| cysteine--tRNA ligase [Escherichia coli 99.0670]
Length = 461
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/488 (45%), Positives = 295/488 (60%), Gaps = 34/488 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLA---ALEKTIRNVLTVLGLMS 491
DD +T + L D + +N L ++E +A A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL-----------KVEDMAAANAMASHLRKLSAVLGLLE 395
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D
Sbjct: 396 Q-EPEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLED 451
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 452 GPQGTTWR 459
>gi|402309177|ref|ZP_10828173.1| cysteine--tRNA ligase [Eubacterium sp. AS15]
gi|400373296|gb|EJP26230.1| cysteine--tRNA ligase [Eubacterium sp. AS15]
Length = 466
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/484 (41%), Positives = 301/484 (62%), Gaps = 26/484 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNTM+ K+E +GKV MY CG T Y+ HIG+AR ++ FDVL YL ++GYEV +
Sbjct: 3 IYNTMTMKKEEFHEIEKGKVKMYSCGPTVYNYFHIGNARPFIVFDVLRNYLEYIGYEVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII +ANE G I ++ +Y +E+++D + +V PRV++++ II
Sbjct: 63 VQNFTDVDDKIIKKANEEGISAIEVADKYIDEYYKDATAIGIRKATVHPRVTENIKEIIG 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++D GFAY + GDVYF V KF EYG+LS + +++ +G R+ V+ +KK+P DFALW
Sbjct: 123 FIQVLIDKGFAYVLGGDVYFEVKKFDEYGKLSHKNIDELVSGARIDVNEQKKSPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K KEGE W+SPWG GRPGWHIECS MS YLG + DIH GG DL+FPHHENEIAQS
Sbjct: 183 KEKKEGEIGWDSPWGVGRPGWHIECSVMSNKYLGSNIDIHSGGQDLIFPHHENEIAQSEC 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ +YW+HNG++ ID+ KMSKSLGNFFT+R V+++Y LR F++ +HYRSPINY
Sbjct: 243 KNGCTFANYWMHNGYINIDNVKMSKSLGNFFTVRDVLKVYDGDVLRFFMLTSHYRSPINY 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSL-LDAAALKD--SIPPDTVTSINKFHNDFLASM 434
S L+SA + + +C+ +L L + K+ D + ++ + F+ M
Sbjct: 303 SKDLLDSAKSSL----DRIKNCKSSLDFSLQKSQDKEVSQEEKDILENVQAIKSTFIGKM 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DDL+T + A+ D +K N ++ K ++++L++L ++
Sbjct: 359 NDDLNTADAITAIFDLVKLANTSVNENSSK-------------TFVQSILSMLNELTA-- 403
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
VL + + D + ++ + IE R A+K+K++ K+D IR++L +GI + D+
Sbjct: 404 --VLNIANNEKAEEQDTS--KIEELIELRNQAKKSKDFAKADEIREELRKMGIEIKDTRQ 459
Query: 555 GTTW 558
GT W
Sbjct: 460 GTQW 463
>gi|172061028|ref|YP_001808680.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
gi|229558620|sp|B1YSM8.1|SYC_BURA4 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|171993545|gb|ACB64464.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
Length = 465
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/490 (44%), Positives = 291/490 (59%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R +++ P+ G+V MYVCG+T YD H+GHAR+ V FD++ R+LR +GY V
Sbjct: 4 LRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYRV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+ R+ H+D L P +EPR + +P +
Sbjct: 64 TYVRNITDIDDKIIRRALENGETIKSLTDRFIGAMHEDEAALGIQRPDIEPRATQFIPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++ NG+AY+ DGDV +SV KF YG+LSG+ L+D RAGERVA + K++P DF
Sbjct: 124 LGMIEKLETNGYAYQAADGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLDF 183
Query: 255 ALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK AK +P W S +G GRPGWHIECSAM LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKRAKADDPQGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNGFV +D+EKMSKSLGNFFTIR+V+E Y +R F++ THY
Sbjct: 244 IAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRFFIVRTHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDF 430
RSP+NYS V L+ A + +Y ALKD P N+ H F
Sbjct: 304 RSPLNYSDVHLDDARASLTRLY---------------TALKDVQPDALALDWNEPHAQRF 348
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
A+M+DD++T V +A L + +N ++ L L + R
Sbjct: 349 AAAMNDDINTPVAVATLFELAGEVNRTCDASLARQLKQLAGLLGLLGREPR--------- 399
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
LQ A + L D++ +I R A++ K+Y ++D IR +L GIAL
Sbjct: 400 ------AFLQQATGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALE 453
Query: 551 DSPVGTT-WR 559
D P G+T WR
Sbjct: 454 DKPGGSTEWR 463
>gi|168181842|ref|ZP_02616506.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
gi|237796964|ref|YP_002864516.1| cysteinyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
gi|259511826|sp|C3KVS3.1|SYC_CLOB6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|182674897|gb|EDT86858.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
gi|229261308|gb|ACQ52341.1| cysteine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
Length = 465
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/485 (40%), Positives = 290/485 (59%), Gaps = 27/485 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++ K+E P V G+V MYVCG T Y+ HIG+AR +V FD + RYL + GY+V +
Sbjct: 3 VYNTLTNKKEEFLPLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKVKF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTD+DDK+I +ANE G L R+ +E+++D DL+ + PR ++ M II
Sbjct: 63 IQNFTDIDDKMIKKANEEGTTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMKEIIK 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
++ +++ G+AY +DGDVYFS KF YG+LSG+ LE+ + G R+ VD RKK+P DFA+W
Sbjct: 123 FVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFAIW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
KS K EP WESPWG GRPGWHIECS M+ LG + DIH GG DL FPHHENEIAQS A
Sbjct: 183 KSQKPEEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
YW+H+ FV ++++KMSKSL NFFT R+++E Y LR+F++ HYR+ IN+
Sbjct: 243 RTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQINF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S+ L+S + +Y ++++ E L + L+D + K+ ++ M DD
Sbjct: 303 SMELLDSTKAALDRLYNSINNLENLLDEVKNEGLRDE-ELKYRDELQKYKEKYIEKMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGK---KQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+T ++ + D ++ +N + K K A+ L IR + + LG++
Sbjct: 362 FNTADAISVIFDLIRDVNTNITIESSKELVKYALDL---------IRELGSPLGILQKST 412
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L E+++ + I++R ARK K++ +D IR DL GI L D+P
Sbjct: 413 KASL--------------EEEIERLIQERQKARKEKDWALADKIRDDLKERGIVLEDTPQ 458
Query: 555 GTTWR 559
G W+
Sbjct: 459 GVRWK 463
>gi|262276150|ref|ZP_06053959.1| cysteinyl-tRNA synthetase [Grimontia hollisae CIP 101886]
gi|262219958|gb|EEY71274.1| cysteinyl-tRNA synthetase [Grimontia hollisae CIP 101886]
Length = 461
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 297/485 (61%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN++++++E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+LGY++
Sbjct: 2 LKIYNSLTKQKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE +L+ R E + D L+ P +EPR + ++ I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCEALTERLIGEMYADFDALNMKRPDIEPRATQYIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ +++D GFAY +GDV F V KF EYG+LS + LE +AG RV V+ KK+P DF
Sbjct: 122 IALVERLIDRGFAYVASNGDVLFEVAKFDEYGKLSRQDLEQLQAGARVDVEEAKKSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++A LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGNHFDIHGGGSDLTFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y +L + +++ A F F A+M
Sbjct: 302 LNYSEENLKQARASMERLYTSLRGLDTSVAAEGGEA---------------FVERFKAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + IN L +A + + + L +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREINRL--------KAEDVAAASKLAARMRELAEVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E L+ + D ++ I+ R AR NK++ +DA R L A+GI L D
Sbjct: 398 PEAFLKGNTEG---GDDEVAEIEALIKARNDARANKDWAAADAARDALTAMGIVLEDGAQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|410862130|ref|YP_006977364.1| cysteinyl-tRNA ligase [Alteromonas macleodii AltDE1]
gi|410819392|gb|AFV86009.1| cysteinyl-tRNA ligase [Alteromonas macleodii AltDE1]
Length = 460
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/490 (44%), Positives = 298/490 (60%), Gaps = 35/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT +R++ P EGKVG+YVCG+T YDLSH+GHAR Y++FDVL RYLRHLG +V
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYLRHLGLDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARANE GE +L+ R H+D ++ L P VEP VS HM I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIAMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++I +++D G+AY+ GDV F V K+ +YG+LS + L+ +AG RV V + K +P DF
Sbjct: 122 IEIIKRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+ K GEP W+SPWG GRPGWHIECSAM+ +LG FDIHGGG DL FPHHENE+AQ
Sbjct: 182 VLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H G V ++ EKMSKSLGNFFT+R V++ + LR FL+ HYRS
Sbjct: 242 SCCAYDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLMSAHYRSQ 301
Query: 375 INYS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
++YS + Q ++A ER++ + L + +S T S + F
Sbjct: 302 LSYSQDNITQAKAALERLY-------------TALRGVVVNES----TDLSYGGYLARFE 344
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A+M+DDL+ + L D + +N +Q E L ++ + +LG++
Sbjct: 345 AAMNDDLNVPEAFSVLFDVARELN---------RQKDNAEEAGKLAAVLKGLGAILGMLQ 395
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ L K + D ++ I+ R AR +K++ +DA R L A G+ L D
Sbjct: 396 SDPDTYL-----KGGEGNDDEAAEIEALIKQRNDARASKDWAAADAARDALNAKGVVLED 450
Query: 552 SPVGTTWRPA 561
P GTTWR A
Sbjct: 451 GPSGTTWRKA 460
>gi|332141401|ref|YP_004427139.1| cysteinyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327551423|gb|AEA98141.1| cysteinyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 460
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/490 (44%), Positives = 298/490 (60%), Gaps = 35/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT +R++ P EGKVG+YVCG+T YDLSH+GHAR Y++FDVL RYLRHLG +V
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYLRHLGLDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARANE GE +L+ R H+D ++ L P VEP VS HM I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIAMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++I +++D G+AY+ GDV F V K+ +YG+LS + L+ +AG RV V + K +P DF
Sbjct: 122 IEIIQRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+ K GEP W+SPWG GRPGWHIECSAM+ +LG FDIHGGG DL FPHHENE+AQ
Sbjct: 182 VLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H G V ++ EKMSKSLGNFFT+R V++ + LR FL+ HYRS
Sbjct: 242 SCCAYDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLMSAHYRSQ 301
Query: 375 INYS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
++YS + Q ++A ER++ + L + +S T S + F
Sbjct: 302 LSYSQDNITQAKAALERLY-------------TALRGVVVNES----TDLSYGGYLARFE 344
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
A+M+DDL+ + L D + +N +Q E L ++ + +LG++
Sbjct: 345 AAMNDDLNVPEAFSVLFDVARELN---------RQKDNAEEAGKLAAVLKGLGAILGMLQ 395
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ L K + D ++ I+ R AR +K++ +DA R L A G+ L D
Sbjct: 396 SDPDTYL-----KGGEGNDDEAAEIEALIKQRNDARASKDWAAADAARDALNAKGVVLED 450
Query: 552 SPVGTTWRPA 561
P GTTWR A
Sbjct: 451 GPSGTTWRKA 460
>gi|423138995|ref|ZP_17126633.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379051549|gb|EHY69440.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 461
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/485 (45%), Positives = 295/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHRDFDALNILRPDSEPRATHHIQEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++ G AY D GDV F V P YGQLS + LE +AG RV V K+NP DF
Sbjct: 122 IEITRILIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K+ + A F F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEA---------------FEARFVEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L KG+ + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL----KGED----MTAANAMASHLRKISGVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ LQ +A ++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PDAFLQSGAQA-DDGEVAEIEAL--IQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|309797198|ref|ZP_07691594.1| cysteinyl-tRNA synthetase [Escherichia coli MS 145-7]
gi|308119182|gb|EFO56444.1| cysteinyl-tRNA synthetase [Escherichia coli MS 145-7]
Length = 461
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQLRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|260596903|ref|YP_003209474.1| cysteinyl-tRNA synthetase [Cronobacter turicensis z3032]
gi|260216080|emb|CBA28825.1| Cysteinyl-tRNA synthetase [Cronobacter turicensis z3032]
Length = 461
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/489 (44%), Positives = 292/489 (59%), Gaps = 36/489 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NTMSR++E KP G+VGMYVCG+T YDL HIGH R ++ FDV+ RYLR LGY++
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GED ++L R E H D L+ L P EPR + H+P I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHNDFDALNILRPESEPRATQHIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I+++ Q++ G AY +GDV F+V+ +YG+LS + LE +AG RV V K+NP DF
Sbjct: 122 IEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +++++ A + F+ +M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDRSVAAAGGEAFEAR---------------FIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + L +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDSSAANQLAAHLRKLAAVLGLLE--- 395
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIE----DRTVARKNKEYEKSDAIRKDLAAVGIALM 550
Q E+ L+ T D + IE R ARK K++ +DA R L +GI L
Sbjct: 396 -----QEPEQFLQSGAQTNDDEVAEIEALIVKRLEARKAKDWAAADAARDRLNEMGIVLE 450
Query: 551 DSPVGTTWR 559
D P GTTWR
Sbjct: 451 DGPQGTTWR 459
>gi|386825986|ref|ZP_10113101.1| cysteinyl-tRNA synthetase [Serratia plymuthica PRI-2C]
gi|386377168|gb|EIJ17990.1| cysteinyl-tRNA synthetase [Serratia plymuthica PRI-2C]
Length = 461
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/485 (45%), Positives = 284/485 (58%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GKVGMYVCGVT YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E GE L+ R E H D L P EPR + H+ I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ +++D AY +GDV FS+D P+YG LS + L+ +AG RV +D K+NP DF
Sbjct: 122 IEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL+ + F F +M
Sbjct: 302 LNYSEENLKQARTALERLY---------------TALRGTNANAQPAGGEAFEARFREAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D + +N L KG+ A + L +R + VLGL+
Sbjct: 347 DDDFNTPEAYSALFDLARDVNRL----KGEDMA----AANGLAAELRKLAKVLGLLQQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A ++ E + L I+ R ARK K++ +DA R L + I L D
Sbjct: 398 PEQFLQSGAQA-DDGEVAEIEAL--IKQRNDARKAKDWALADAARDRLNEMSIVLEDGSQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|300996966|ref|ZP_07181604.1| cysteinyl-tRNA synthetase [Escherichia coli MS 200-1]
gi|300304371|gb|EFJ58891.1| cysteinyl-tRNA synthetase [Escherichia coli MS 200-1]
Length = 461
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+D+KII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDEKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|238791509|ref|ZP_04635147.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
gi|238729125|gb|EEQ20641.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
Length = 461
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/488 (45%), Positives = 287/488 (58%), Gaps = 34/488 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT+SR++E KP GK+GMYVCG+T YDL HIGH R +V FDV+ RYLR+LGY +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ P +EPR + H+P I
Sbjct: 62 TYVRNVTDVDDKIIKRALENNESCEQLTTRMLAEMHKDFDALNLKRPDLEPRATHHIPEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I + +++ AY +GDV F+VD P+YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IALTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWGPGRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWASPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V ID EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y AL DA A T +F F A+M
Sbjct: 302 LNYSEENLKQARASLERLY-------TALRGTDANA--------TPAGGAEFEARFRAAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T +AL D + +N L + + + L +R + VLGL+
Sbjct: 347 DDDFNTPEAYSALFDIAREVNRL--------KTEDITAANGLAAELRKLAHVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQ---RIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
E+ LQ A +D+V + I+ R AR +K++ +D+ R L +GI L D
Sbjct: 398 PELFLQ------SGAQTNDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED 451
Query: 552 SPVGTTWR 559
P GT WR
Sbjct: 452 GPQGTIWR 459
>gi|187734096|ref|YP_001879221.1| cysteinyl-tRNA synthetase [Shigella boydii CDC 3083-94]
gi|416269156|ref|ZP_11642364.1| Cysteinyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
gi|416295501|ref|ZP_11651200.1| Cysteinyl-tRNA synthetase [Shigella flexneri CDC 796-83]
gi|417680511|ref|ZP_12329896.1| cysteinyl-tRNA synthetase [Shigella boydii 3594-74]
gi|420324132|ref|ZP_14825918.1| cysteinyl-tRNA synthetase [Shigella flexneri CCH060]
gi|420334694|ref|ZP_14836316.1| cysteinyl-tRNA synthetase [Shigella flexneri K-315]
gi|420351298|ref|ZP_14852496.1| cysteinyl-tRNA synthetase [Shigella boydii 4444-74]
gi|421681218|ref|ZP_16121048.1| cysteinyl-tRNA synthetase [Shigella flexneri 1485-80]
gi|229558790|sp|B2TTB3.1|SYC_SHIB3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187431088|gb|ACD10362.1| cysteinyl tRNA synthetase [Shigella boydii CDC 3083-94]
gi|320174878|gb|EFW49998.1| Cysteinyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
gi|320186200|gb|EFW60940.1| Cysteinyl-tRNA synthetase [Shigella flexneri CDC 796-83]
gi|332098469|gb|EGJ03435.1| cysteinyl-tRNA synthetase [Shigella boydii 3594-74]
gi|391257022|gb|EIQ16144.1| cysteinyl-tRNA synthetase [Shigella flexneri CCH060]
gi|391268385|gb|EIQ27313.1| cysteinyl-tRNA synthetase [Shigella flexneri K-315]
gi|391288622|gb|EIQ47122.1| cysteinyl-tRNA synthetase [Shigella boydii 4444-74]
gi|404341966|gb|EJZ68368.1| cysteinyl-tRNA synthetase [Shigella flexneri 1485-80]
Length = 461
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/485 (45%), Positives = 293/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQTRAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|306819816|ref|ZP_07453471.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304552185|gb|EFM40121.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 466
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/484 (41%), Positives = 301/484 (62%), Gaps = 26/484 (5%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNTM+ K+E +GKV MY CG T Y+ HIG+AR ++ FDVL YL ++GYEV +
Sbjct: 3 IYNTMTMKKEEFHEIEKGKVKMYSCGPTVYNYFHIGNARPFIVFDVLRNYLEYIGYEVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTDVDDKII +ANE G I ++ +Y +E+++D + +V PRV++++ II
Sbjct: 63 VQNFTDVDDKIIKKANEEGISAIEVADKYIDEYYKDAAAIGIRKATVHPRVTENIKEIIG 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++D GFAY + GDVYF V KF EYG+LS + +++ +G R+ V+ +KK+P DFALW
Sbjct: 123 FIQDLIDKGFAYVLGGDVYFEVKKFDEYGKLSHKNIDELISGARIDVNEQKKSPLDFALW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K KEGE W+SPWG GRPGWHIECS MS YLG + DIH GG DL+FPHHENEIAQS
Sbjct: 183 KEKKEGEIGWDSPWGVGRPGWHIECSVMSNKYLGANIDIHSGGQDLIFPHHENEIAQSEC 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
+ +YW+HNG++ ID+ KMSKSLGNFFT+R V+++Y LR F++ +HYRSPINY
Sbjct: 243 KNGCTFANYWMHNGYINIDNVKMSKSLGNFFTVRDVLKVYDGDVLRFFMLTSHYRSPINY 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSL-LDAAALKD--SIPPDTVTSINKFHNDFLASM 434
S L+SA + + +C+ +L L + K+ D + ++ + F+ M
Sbjct: 303 SKDLLDSAKSSL----DRIKNCKSSLDFSLQKSQDKEVSQEEKDILENVQAIKSTFIEKM 358
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DDL+T + A+ D +K N ++ K ++++L++L ++
Sbjct: 359 NDDLNTADAITAIFDLVKLANTSVNENSSK-------------TFVQSILSMLNELTA-- 403
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
VL + + D + ++ + IE R A+K+K++ K+D IR++L +GI + D+
Sbjct: 404 --VLNIANNEKAEEQDTS--KIEELIELRNQAKKSKDFAKADEIREELRKMGIEIKDTRQ 459
Query: 555 GTTW 558
GT W
Sbjct: 460 GTQW 463
>gi|444380435|ref|ZP_21179568.1| Cysteinyl-tRNA synthetase [Enterovibrio sp. AK16]
gi|443675462|gb|ELT82191.1| Cysteinyl-tRNA synthetase [Enterovibrio sp. AK16]
Length = 460
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/485 (46%), Positives = 297/485 (61%), Gaps = 29/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN++++K+E KP GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR LGY++
Sbjct: 2 LKIYNSLTKKKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRFLGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R E + D L+ P VEPR + + I
Sbjct: 62 KFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMYADFDALNMKRPDVEPRATQFIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I ++ ++++ GFAY +GDV F V KF EYG+LS + L+ +AG RV V+ KK+P DF
Sbjct: 122 IALVERLIERGFAYVASNGDVLFEVAKFDEYGKLSRQDLDQLQAGARVDVEEAKKSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++A LG+ FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGNHFDIHGGGSDLTFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y +L LD +A T +F F +M
Sbjct: 302 LNYSEENLKQARASMERLYTSLRG-------LDLSA--------TAEGGEEFIERFKVAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + IN L +A +E + L +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREINRL--------KAEDVEGASKLAARMRELAEVLGLLEQD- 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ A ++ E + L I+ R AR +K++ +DA R L A+GI L D
Sbjct: 398 PEAFLQ--GNAGGDDEVVEIEAL--IKARNDARASKDWAAADAARDALTAMGIVLEDGAA 453
Query: 555 GTTWR 559
GTTWR
Sbjct: 454 GTTWR 458
>gi|390934101|ref|YP_006391606.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569602|gb|AFK86007.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 464
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/482 (40%), Positives = 290/482 (60%), Gaps = 22/482 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E KP + V MYVCG T Y+ HIG+AR ++ FD + RYL + GY+V Y
Sbjct: 3 IYNTLTRRKEEFKPLNDNVVNMYVCGPTVYNFIHIGNARAFIVFDTVRRYLEYKGYKVNY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDK+I R++E L+ RY +E+ +D L + PR ++++ II+
Sbjct: 63 VQNFTDIDDKLIKRSHEENTTVKELADRYIDEYFKDADSLGIKRATFHPRATENIEEIIE 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ +++D GFAY DG+VY+ KF +YG+LS + +++ +AG R+ V+ KKNP DF LW
Sbjct: 123 FVKKLIDKGFAYEKDGNVYYDTTKFKDYGKLSHKNIDELKAGARIEVNEDKKNPTDFVLW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AKEGEP+W+SPWG GRPGWHIECS MS YLG + DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KAAKEGEPYWDSPWGKGRPGWHIECSTMSTKYLGKTLDIHAGGPDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A + YW+H G++ I++EKMSKS NFFT+R V+ Y P LR F++ +HYR+PINY
Sbjct: 243 ANDAEFAKYWMHIGYLNINNEKMSKSKNNFFTVRDVISQYDPEVLRFFMLMSHYRNPINY 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S +E A + T+++ L + + L+D ++ F +M DD
Sbjct: 303 SQDLIEQAKGGFLRLSNTVYNLRHLLDVAEDRQLRDE-EKAYKEKYEEYKRKFEEAMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T ++ + + ++ IN + K E + + ++ +VLG+
Sbjct: 362 FNTADAISVIFEMVRDINSNIDGNSPK------ELIKYILDVFLSLSSVLGI-------- 407
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
K+ DL +D++ + IE R ARK K + ++D IR +L GI L D+P G
Sbjct: 408 -------TYKKKDLLDDEIKELIEKRQEARKAKNWAEADRIRDELKKQGIVLEDTPNGVR 460
Query: 558 WR 559
W+
Sbjct: 461 WK 462
>gi|397663742|ref|YP_006505280.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
gi|395127153|emb|CCD05341.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
Length = 456
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/490 (43%), Positives = 289/490 (58%), Gaps = 45/490 (9%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN+++RK+E GK+GMYVCG+T YD H+GHAR V FDV+ RYLR G++V
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARA+E G L+ +Y + + D L+ LPP EPR + H+ I
Sbjct: 62 TYVRNITDIDDKIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I +I ++L+ AY +GDV + VD FPEYG+LS + +E +G RV + K++P DF
Sbjct: 122 IRLIQRLLEKDSAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +YW+H G + I+ EKM+KS+GNF+TI V++ +HP +R FL+ +HYRSP
Sbjct: 242 SEAATGKPFANYWLHVGMLQINGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSI--NKFHNDFLA 432
+NYS L +A + + +YQ + D +PP T S + F
Sbjct: 302 LNYSEENLLNAKKALIRLYQAVKD----------------VPPQTADSKLDEYWQEQFNQ 345
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M+DD +T V L+ L +N + AL T++N+ +LG
Sbjct: 346 AMNDDFNTPVALSVLFQLAHEVNK--------------SNSPALAHTLKNLAGILG---- 387
Query: 493 GYSEVLLQLREKALKRADLTEDQVL---QRIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LQ ++ ++ L E++ L Q I +R AR + + K+D IR DL + GI L
Sbjct: 388 -----FLQKDPESFLQSGLAEEEKLVIEQLIAERLKARAERNWAKADQIRADLLSKGIEL 442
Query: 550 MDSPVGTTWR 559
D GTTWR
Sbjct: 443 EDGATGTTWR 452
>gi|225181302|ref|ZP_03734747.1| cysteinyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225168082|gb|EEG76888.1| cysteinyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 469
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/483 (43%), Positives = 287/483 (59%), Gaps = 21/483 (4%)
Query: 78 LYNTMSRKRELVKPKVEGK-VGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVC 136
++NT++RK+E P VEGK VG+Y CG T YD HIG+AR+++ FDV+ RYLR GY+V
Sbjct: 5 VFNTLTRKKEEFVP-VEGKKVGIYACGPTVYDYFHIGNARIFIVFDVIRRYLRWRGYDVT 63
Query: 137 YVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHII 196
+V+NFTD+DDK+I RANELG L+ RY E + +D+ L P P+ ++H+ ++
Sbjct: 64 FVQNFTDIDDKMIKRANELGITVPELAERYIEAYFEDVEALGVEPADEHPKATEHIEEMV 123
Query: 197 DMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
++I ++ G AY VDGDVYF F YG+LS + L++ +G RV VD RKK+P DF L
Sbjct: 124 ELIQKLEAKGMAYEVDGDVYFHTPAFDNYGELSHQPLDELESGARVDVDERKKHPLDFVL 183
Query: 257 WKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSC 316
WK K GEP WESPWG GRPGWHIECS MS+ YLG + DIH GG DL+FPHHENE AQS
Sbjct: 184 WKKQKPGEPAWESPWGKGRPGWHIECSVMSSKYLGDTLDIHAGGPDLIFPHHENEKAQSE 243
Query: 317 AACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPIN 376
A YW+H G++ I+ EKMSKSLGNF T+R++ + P +R F++ HYR+PIN
Sbjct: 244 GATGQPFAKYWLHAGYLNINQEKMSKSLGNFMTVREIRKQIDPQIVRFFMLSAHYRNPIN 303
Query: 377 YSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSD 436
YS LE A + + +++ L L + + + ++ F+ +M D
Sbjct: 304 YSPDLLEQAKSGLDRLNNVVYNLRDLLEKLPEGQGDSADATERLAALEAHRGRFVEAMDD 363
Query: 437 DLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSE 496
D +T LA L D + N L + +Q + ++LA E+ + +VLG E
Sbjct: 364 DFNTADGLAVLFDVARETNAYLKNAQVSRQVVE-KTLALFEE----LGSVLGFFQKQDDE 418
Query: 497 VLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGT 556
L D T V + IE R ARK K++ +DAIR L A+GI L D+P G
Sbjct: 419 DL-----------DAT---VNEMIEKRQAARKEKDWATADAIRDQLQAMGIVLEDTPQGI 464
Query: 557 TWR 559
WR
Sbjct: 465 RWR 467
>gi|339325369|ref|YP_004685062.1| cysteinyl-tRNA synthetase [Cupriavidus necator N-1]
gi|338165526|gb|AEI76581.1| cysteinyl-tRNA synthetase CysS [Cupriavidus necator N-1]
Length = 462
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/490 (45%), Positives = 287/490 (58%), Gaps = 39/490 (7%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R+++ P GKV MYVCG+T YD H+GHARV V FD+++R+LR GYEV Y
Sbjct: 6 IYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGYEVTY 65
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+N TD+DDKII RA E GE L+ R+ + H+D L + P EPR +D++P ++D
Sbjct: 66 VQNITDIDDKIIRRAAENGETIGELTTRFIQYMHEDAAALGVIRPDHEPRATDYVPQMLD 125
Query: 198 MITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFAL 256
MI ++ G AY+ DGDV +SV KF YG+LSG+ LED RAGERV+ + K++P DF L
Sbjct: 126 MIGKLEARGLAYQASDGDVNYSVRKFDGYGKLSGKSLEDLRAGERVSANDAKQDPLDFVL 185
Query: 257 WKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIA 313
WKSAK EP W+S WG GRPGWHIECSAMS LG FDIHGGG DL FPHHENEIA
Sbjct: 186 WKSAKASEPPESKWDSKWGAGRPGWHIECSAMSCTLLGEHFDIHGGGADLQFPHHENEIA 245
Query: 314 QSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRS 373
QS A ++ W+HNGFV I+ EKMSKSLGNFFTIR+V++ Y +R F++ HYRS
Sbjct: 246 QSEGASGKPFVNMWMHNGFVRINDEKMSKSLGNFFTIREVLKSYDAEVVRFFILRAHYRS 305
Query: 374 PINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFH-NDFLA 432
P+NYS L+ A + +Y ALKDS P ++ H F
Sbjct: 306 PLNYSDAHLDDARHALTRLY---------------TALKDSQPGGCAVDWDEPHARRFAE 350
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M DD +T + ++ L D IN R G A R L AL T LGL+
Sbjct: 351 AMGDDFNTPIAMSVLFDLASEIN-----RTGSTAAAR--QLKALAGT-------LGLLER 396
Query: 493 GYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDS 552
L R ++ +Q+ I R A+ + + ++D IR L GI L D
Sbjct: 397 DPHTFLQGGRSD----DGISPEQIETLIAARKTAKLERNFAEADRIRAQLLEAGIVLEDK 452
Query: 553 PVGTT-WRPA 561
P G T WR A
Sbjct: 453 PGGATEWRRA 462
>gi|334123097|ref|ZP_08497127.1| cysteine--tRNA ligase [Enterobacter hormaechei ATCC 49162]
gi|333391213|gb|EGK62333.1| cysteine--tRNA ligase [Enterobacter hormaechei ATCC 49162]
Length = 461
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 293/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NTM+R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ ++++ G AY D GDV FSV P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IEITEKLIERGHAYVADNGDVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L ++++ A F F+ M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDRSVPAAGGEA---------------FEARFVEVM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L ++ + + AL +R + +VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KSEDMAAANALASHLRKLSSVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+V LQ +A ++ E + L I+ R AR+ K++ +DA R L +GI L D P
Sbjct: 398 PDVFLQSGAQA-DDGEVAEIEAL--IKARLEARQAKDWAAADAARNRLTEMGIILEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|410727955|ref|ZP_11366148.1| cysteinyl-tRNA synthetase [Clostridium sp. Maddingley MBC34-26]
gi|410597515|gb|EKQ52126.1| cysteinyl-tRNA synthetase [Clostridium sp. Maddingley MBC34-26]
Length = 466
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/482 (40%), Positives = 290/482 (60%), Gaps = 21/482 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P + G+V MYVCG T Y+ HIG+ R ++ FD + RYL + GY+V +
Sbjct: 3 VYNTLTRQKEEFIPIIPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYLEYRGYKVTF 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
++NFTD+DDK+I +AN+ G L +Y +E++QD L ++ PR ++++ II
Sbjct: 63 IQNFTDIDDKMINKANDEGVSVKELGDKYIKEYYQDADALRIERATINPRATEYITDIIK 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ +++ GFAY VDGDVY+S KF YG+L G+ LED +AG R++VD RKK+P DFA+W
Sbjct: 123 FVEELIAAGFAYEVDGDVYYSTKKFSGYGKLVGQNLEDLQAGARISVDERKKDPMDFAVW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+ K GEP WESPWG GRPGWHIECS M+ LG + DIH GGMDL FPHHENEIAQS A
Sbjct: 183 KAQKPGEPAWESPWGLGRPGWHIECSCMAKKLLGDTIDIHAGGMDLKFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
YWIH+ FV +D++KMSKSL NFFT R+++E Y ++R ++ HYR IN+
Sbjct: 243 VTGKPFAHYWIHSAFVNVDNKKMSKSLNNFFTAREILEEYDADSIRFLMLSGHYRIQINF 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
+ L+SA I +Y +++ E + A+ D + S++K+ + F+ M DD
Sbjct: 303 TKELLDSAKSSIERLYNCINNLENLKDEVKKKAI-DEEELKYLKSLDKYRDRFIEKMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T ++ L D + IN+ + + + L IR + LG++ + +
Sbjct: 362 FNTADAISVLFDLTRDINNNVDINSSAELCDKANEL------IRELGKPLGILQSHMKKD 415
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
L E ++ + IE R ARKNK++ +D IR DL + I L D+P G
Sbjct: 416 L--------------ETEIQELIEKRQQARKNKDFALADKIRDDLKSRNIILEDTPQGVR 461
Query: 558 WR 559
W+
Sbjct: 462 WK 463
>gi|407364085|ref|ZP_11110617.1| cysteinyl-tRNA ligase [Pseudomonas mandelii JR-1]
Length = 460
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/487 (44%), Positives = 280/487 (57%), Gaps = 30/487 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT+++ +E+ KP V MYVCG+T YD HIGH R V FD++ R+LR GY +
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNNVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYNL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD++DKII RA E GE L+ R H+D L+ L P +EPR +DH+ +
Sbjct: 62 TYVRNITDIEDKIINRAKENGEPFDVLTERMITAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 196 IDMITQILDNGFAYR-VDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
MI ++D G+AY +GDVY+ V KF YG+LS +K+ED R G R+ VD K++P DF
Sbjct: 122 QTMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKQDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W SPWG GRPGWHIECS MS LG +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGAKPGEPSWPSPWGDGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA ++ + W+H G + I+ EKMSKSL NFFTIR V+E YHP +R L+ +HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
INYS L+ A + Y L +P F F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALK----------------GLPSVAPAGGEAFVERFTQVM 345
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD T A L + ++ IN L + L + A L ++ + +VLG++
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRES--------DLNAAAGLAARLKELASVLGVLQLEA 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
+ L+ A R D E L I+ R AR NK++ +SD IR L A+G+ L D
Sbjct: 398 DDF---LQAGAEGRVDAAEVDAL--IQARLTARANKDWAESDRIRDQLTAMGVVLEDGKG 452
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 453 GTTWRLA 459
>gi|306813010|ref|ZP_07447203.1| cysteinyl-tRNA synthetase [Escherichia coli NC101]
gi|432970700|ref|ZP_20159578.1| cysteinyl-tRNA synthetase [Escherichia coli KTE207]
gi|433081471|ref|ZP_20267945.1| cysteinyl-tRNA synthetase [Escherichia coli KTE133]
gi|305853773|gb|EFM54212.1| cysteinyl-tRNA synthetase [Escherichia coli NC101]
gi|431485837|gb|ELH65494.1| cysteinyl-tRNA synthetase [Escherichia coli KTE207]
gi|431605306|gb|ELI74695.1| cysteinyl-tRNA synthetase [Escherichia coli KTE133]
Length = 461
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/485 (45%), Positives = 294/485 (60%), Gaps = 28/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+ P DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRTPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L +A + + A+ +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDMAREVNRL--------KAEDMAAANAMASHLRKLSAVLGLLEQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D P
Sbjct: 398 PEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ 454
Query: 555 GTTWR 559
GTTWR
Sbjct: 455 GTTWR 459
>gi|168798100|ref|ZP_02823107.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC508]
gi|189379362|gb|EDU97778.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC508]
Length = 461
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/488 (45%), Positives = 295/488 (60%), Gaps = 34/488 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP G+VGMYVCG+T YDL HIGH R +V FDV+ RYLR LGY++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RANE GE ++L R E H+D L+ L P +EPR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I++ Q++ G AY D GDV F V P YG LS + L+ +AG RV V K+NP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +KEGEP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSLGNFFT+R V++ Y +R FL+ HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y L +K ++ A F F+ +M
Sbjct: 302 LNYSEENLKHARAALERLYTALRGTDKTVAPAGGEA---------------FEARFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLA---ALEKTIRNVLTVLGLMS 491
DD +T + L D + +N L ++E +A A+ +R + VLGL+
Sbjct: 347 DDDFNTPEAYSVLFDMAREVNRL-----------KVEDMAAANAMASHLRKLSAVLGLLE 395
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
E LQ +A +++ E + L I+ R ARK K++ +DA R L +GI L D
Sbjct: 396 Q-EPEAFLQSGAQA-DDSEVAEIEAL--IQQRLDARKAKDWAAADAARDRLNEMGIVLED 451
Query: 552 SPVGTTWR 559
P GTTWR
Sbjct: 452 GPQGTTWR 459
>gi|407684266|ref|YP_006799440.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'English Channel
673']
gi|407245877|gb|AFT75063.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'English Channel
673']
Length = 460
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/492 (44%), Positives = 299/492 (60%), Gaps = 39/492 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT +R++ P EGKVG+YVCG+T YDLSH+GHAR Y++FDVL RY+RHLG +V
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYMRHLGLDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARANE GE +L+ R H+D ++ L P VEP VS HM I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIAMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I +I +++D G+AY+ GDV F V K+ +YG+LS + L+ +AG RV V + K +P DF
Sbjct: 122 IAIIQRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+ K GEP W+SPWG GRPGWHIECSAM+ +LG FDIHGGG DL FPHHENE+AQ
Sbjct: 182 VLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H G V ++ EKMSKSLGNFFT+R V++ + LR FL+ HYRS
Sbjct: 242 SCCAYDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLMSAHYRSQ 301
Query: 375 INYS---VVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINK--FHND 429
++YS + Q ++A ER++ AL+ + D T +N +
Sbjct: 302 LSYSQDNITQAKAALERLY------------------TALR-GVTVDESTELNHGGYLTR 342
Query: 430 FLASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGL 489
F A+M+DDL+ + L D + +N +Q +E L ++ + +LG+
Sbjct: 343 FEAAMNDDLNVPEAFSVLFDVARELN---------RQKDNVEEAGKLAAVLKGLGAILGM 393
Query: 490 MSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
+ + L K + D ++ I+ R AR +K++ +DA R L A G+ L
Sbjct: 394 LQSDPDTFL-----KGGEGNDDEAAEIEALIKQRNDARASKDWAAADAARDALNAKGVVL 448
Query: 550 MDSPVGTTWRPA 561
D P GTTWR A
Sbjct: 449 EDGPSGTTWRKA 460
>gi|197286005|ref|YP_002151877.1| cysteinyl-tRNA synthetase [Proteus mirabilis HI4320]
gi|227356519|ref|ZP_03840906.1| cysteinyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
gi|425068915|ref|ZP_18472031.1| cysteinyl-tRNA synthetase [Proteus mirabilis WGLW6]
gi|425071558|ref|ZP_18474664.1| cysteinyl-tRNA synthetase [Proteus mirabilis WGLW4]
gi|229470558|sp|B4F1M6.1|SYC_PROMH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|194683492|emb|CAR44297.1| cysteinyl-tRNA synthetase [Proteus mirabilis HI4320]
gi|227163275|gb|EEI48202.1| cysteinyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
gi|404598416|gb|EKA98886.1| cysteinyl-tRNA synthetase [Proteus mirabilis WGLW4]
gi|404598815|gb|EKA99283.1| cysteinyl-tRNA synthetase [Proteus mirabilis WGLW6]
Length = 463
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 290/485 (59%), Gaps = 27/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L ++NT++R++E KP +GK+GMYVCG+T YDL HIGH R +V FD + RYLR+LGY+V
Sbjct: 2 LKIFNTLTRQKEEFKPIHKGKIGMYVCGITIYDLCHIGHGRTFVAFDAITRYLRYLGYDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TDVDDKII RA E E L+ R E H+D L+ L P EPR + H+ I
Sbjct: 62 NYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNILRPDSEPRATHHIAEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I + ++ G AY + GDV F++D P+YG LS + LE +AG RV V + K+NP DF
Sbjct: 122 IALTETLIKRGHAYVAENGDVMFAIDTDPDYGLLSRQDLEQLQAGARVEVANVKRNPMDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP W SPWG GRPGWHIECSAM+ LGH FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWTSPWGEGRPGWHIECSAMNGKELGHHFDIHGGGSDLMFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S A + +++YW+H+G V +D EKMSKSL NFFTIR V+ Y +R FL+ HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLLSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NY+ L+ A + +Y +L + A F F+ +M
Sbjct: 302 LNYTEENLKQARTALERLYTSLRGTDANAQPAGGEA---------------FEAQFIEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DD +T + L D + +N L + + +E+ L +R + VLGL+
Sbjct: 347 NDDFNTPEAYSVLFDLAREVNRL--------KTVNMEAANGLAAVLRKLAKVLGLLEQ-Q 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ +A ++ + + L I+ R ARKNK++ +DA R L A+GI L D P
Sbjct: 398 PEHFLQSGAQADDADEVEKIEAL--IQQRNDARKNKDWAAADAARDALTAMGIVLEDGPQ 455
Query: 555 GTTWR 559
GTTWR
Sbjct: 456 GTTWR 460
>gi|148358849|ref|YP_001250056.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
gi|187629845|sp|A5IBG0.1|SYC_LEGPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148280622|gb|ABQ54710.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
Length = 456
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/490 (43%), Positives = 289/490 (58%), Gaps = 45/490 (9%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYN+++RK+E GK+GMYVCG+T YD H+GHAR V FDV+ RYLR G++V
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARA+E L+ +Y + + D L+ LPP EPR + H+ I
Sbjct: 62 TYVRNITDIDDKIIARASERDVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 196 IDMITQILDNGFAY-RVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I +I ++L+ G AY +GDV + VD FPEYG+LS + +E +G RV + K++P DF
Sbjct: 122 IRLIQRLLEKGSAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK AK GEP W SPWG GRPGWHIECSAM+ LG FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
S AA +YW+H G + ++ EKM+KS+GNF+TI V++ +HP +R FL+ +HYRSP
Sbjct: 242 SEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSP 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSI--NKFHNDFLA 432
+NYS L +A + + +YQ + D +PP T S + F
Sbjct: 302 LNYSEENLLNAKKALIRLYQAVKD----------------VPPQTADSKLDEYWQEQFNQ 345
Query: 433 SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMST 492
+M+DD +T V L+ L +N + AL T++N+ +LG
Sbjct: 346 AMNDDFNTPVALSVLFQLAHEVNK--------------SNSPALAHTLKNLAGILG---- 387
Query: 493 GYSEVLLQLREKALKRADLTEDQVL---QRIEDRTVARKNKEYEKSDAIRKDLAAVGIAL 549
LQ ++ ++ L E++ L Q I +R AR + + K+D IR DL + GI L
Sbjct: 388 -----FLQKDPESFLQSGLAEEEKLVIEQLIAERLQARAERNWAKADQIRTDLLSKGIEL 442
Query: 550 MDSPVGTTWR 559
D GTTWR
Sbjct: 443 EDGATGTTWR 452
>gi|300311195|ref|YP_003775287.1| cysteinyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
gi|300073980|gb|ADJ63379.1| cysteinyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
Length = 463
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/494 (45%), Positives = 299/494 (60%), Gaps = 38/494 (7%)
Query: 74 TQLWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGY 133
++L +YNT++R ++ P GKV +YVCG+T YD HIGHARV V FD++ R+LR GY
Sbjct: 2 SELKIYNTLARDKQTFSPIEPGKVRLYVCGMTVYDYCHIGHARVLVVFDMVQRWLRASGY 61
Query: 134 EVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMP 193
EV YVRN TD+DDKII RA E GE L+ R+ + ++D L P EPR + ++P
Sbjct: 62 EVTYVRNITDIDDKIIKRAVENGETIAQLTNRFIDAMNEDAAALGVQRPDHEPRATQYVP 121
Query: 194 HIIDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPA 252
++D+I ++ NG AY+ DGDV +SV FP YG+LSG+ L+D RAGERV V++ K++P
Sbjct: 122 QMLDLIGKLEKNGLAYKASDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDPL 181
Query: 253 DFALWKSAKEGEP---FWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHE 309
DF LWK+AK EP W+SPWG GRPGWHIECSAMS+ LG FDIHGGG DL FPHHE
Sbjct: 182 DFVLWKAAKPAEPDEAKWDSPWGCGRPGWHIECSAMSSDLLGDHFDIHGGGQDLQFPHHE 241
Query: 310 NEIAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGT 369
NEIAQS A ++ ++YW+HNGFV ID+EKMSKSLGNFFTIR V++ Y P LR F++
Sbjct: 242 NEIAQSEGAHQHTFVNYWMHNGFVRIDNEKMSKSLGNFFTIRDVLKKYDPEVLRFFILRA 301
Query: 370 HYRSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHND 429
HYRSP+NYS L+ A + + +Y ALKD P ++ H
Sbjct: 302 HYRSPLNYSDAHLDDARQALTRLY---------------TALKDVPPQAGGLVADEAHAV 346
Query: 430 FLA-SMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLG 488
LA +++DD +T V +A L + +N + QA +L++LA +LG
Sbjct: 347 RLADALNDDFNTPVAIAVLFELANEVN----RSRSPVQARQLKALAG----------ILG 392
Query: 489 LMSTGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIA 548
L+ E L+ L E ++ I R A+ K + ++D IR +L GI
Sbjct: 393 LLQREPGEY---LKGGVAAAEGLGEAEIEALIAARKAAKAGKNFAEADRIRAELTEAGII 449
Query: 549 LMDSPVG-TTWRPA 561
L D P G T WR A
Sbjct: 450 LEDKPGGLTEWRRA 463
>gi|330445515|ref|ZP_08309167.1| cysteinyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489706|dbj|GAA03664.1| cysteinyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 460
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/485 (45%), Positives = 297/485 (61%), Gaps = 29/485 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YN+++R++E P GKVGMYVCGVT YDL HIGH R +V+FDV+ RYLR+ GY++
Sbjct: 2 LKIYNSLTRQKEAFTPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYDL 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
+VRN TD+DDKII RA E GE SL+ R E H D L P VEPR + + I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCESLTERLIGEMHADFDALGMKRPDVEPRATQFIAEI 121
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I + ++++ GFAY +GDV F V KF +YG+LS + L+ +AG RV +++ K++P DF
Sbjct: 122 IALCERLIERGFAYVASNGDVMFEVSKFEDYGRLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK +K GEP WESPWGPGRPGWHIECSAM++A LG FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H+G V +D EKMSKSLGNFFTIR V+ Y P +R FL+ HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLNHYDPETVRYFLMSGHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
+NYS L+ A + +Y +L + + ++AA ++ F F +M
Sbjct: 302 LNYSEENLKQARSALERLYTSLRGLDTS---VEAAGGEE------------FVARFKEAM 346
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
DD +T + L D + IN L +A + + + L +R + VLGL+S
Sbjct: 347 DDDFNTPEAYSVLFDMAREINRL--------KADDVAAASVLGARMRELADVLGLLSQ-E 397
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
E LQ A + D+ E + L I+ R AR K++ +D R L A+GI L D
Sbjct: 398 PETFLQ--GGAGEDDDVAEIEAL--IQQRLDARAAKDWAAADEARDKLMAMGIILEDGAQ 453
Query: 555 GTTWR 559
GTTWR
Sbjct: 454 GTTWR 458
>gi|407700517|ref|YP_006825304.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'Black Sea 11']
gi|407249664|gb|AFT78849.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'Black Sea 11']
Length = 460
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/487 (43%), Positives = 290/487 (59%), Gaps = 29/487 (5%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L LYNT +R++ P EGKVG+YVCG+T YDLSH+GHAR Y++FDVL RY+RHLG +V
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYMRHLGLDV 61
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKIIARANE GE +L+ R H+D ++ L P VEP VS HM I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIGMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 196 IDMITQILDNGFAYRVD-GDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
I +I +++D G+AY+ GDV F V K+ +YG+LS + L+ +AG RV V + K +P DF
Sbjct: 122 IAIIQRLMDKGYAYQAQSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDDPLDF 181
Query: 255 ALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQ 314
LWK+ K GEP W+SPWG GRPGWHIECSAM+ +LG FDIHGGG DL FPHHENE+AQ
Sbjct: 182 VLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPHHENEVAQ 241
Query: 315 SCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSP 374
SC A + +++ W+H G V ++ EKMSKSLGNFFT+R V++ + LR FL+ HYRS
Sbjct: 242 SCCAYDTPYVNVWMHTGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLMSAHYRSQ 301
Query: 375 INYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASM 434
++YS + A + +Y L E + T S + F A+M
Sbjct: 302 LSYSQDNITQAKAALERLYTALRGVE--------------VDESTDLSYGGYLTRFEAAM 347
Query: 435 SDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGY 494
+DDL+ + L D + +N +Q + L ++ + +LG++ +
Sbjct: 348 NDDLNVPEAFSVLFDVARELN---------RQKDNADEAGKLAAVLKGLGAILGMLQSDP 398
Query: 495 SEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPV 554
L K + D ++ I+ R AR K++ +DA R L A G+ L D P
Sbjct: 399 DTYL-----KGGEGNDDEAAEIEALIKQRNDARAAKDWAAADAARDALNAKGVVLEDGPA 453
Query: 555 GTTWRPA 561
GTTWR A
Sbjct: 454 GTTWRKA 460
>gi|392958566|ref|ZP_10324075.1| cysteinyl-tRNA ligase [Bacillus macauensis ZFHKF-1]
gi|391875467|gb|EIT84078.1| cysteinyl-tRNA ligase [Bacillus macauensis ZFHKF-1]
Length = 466
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/488 (42%), Positives = 289/488 (59%), Gaps = 30/488 (6%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
+ +YNT+SR++E P EGKV MYVCG T Y+ HIG+AR + FD + RYL + GYEV
Sbjct: 3 IMIYNTLSRQKEAFVPLEEGKVRMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEYRGYEV 62
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
++ NFTDVDDK+I A ELG D ++++R+ + +H+D+ L PRV++ MP I
Sbjct: 63 KFISNFTDVDDKLIRAAKELGTDVPTVAQRFIDAYHEDVCALGVKEAHHHPRVTETMPEI 122
Query: 196 IDMITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFA 255
ID I Q++D G+AY GDVYF F YG+LS + ++D R+G R+ V K++P DFA
Sbjct: 123 IDFIAQLIDKGYAYESQGDVYFKTRAFNGYGKLSHQSIDDLRSGARIEVGDIKQDPLDFA 182
Query: 256 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 315
LWK+AK+GE FWESPWG GRPGWHIECSAM+ YLG S DIHGGG DL FPHHENEIAQS
Sbjct: 183 LWKAAKDGEIFWESPWGKGRPGWHIECSAMAKKYLGDSIDIHGGGQDLAFPHHENEIAQS 242
Query: 316 CAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPI 375
A YW+HNG++ I++EKMSKSLGNF + +++ P +R F++ HYR+PI
Sbjct: 243 EALNEVPMAKYWMHNGYININNEKMSKSLGNFVLVHDMIKELDPQVIRFFMMAVHYRNPI 302
Query: 376 NYSVVQLESAS---ERIFYIYQTL-HDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFL 431
N++ LESA RI Y+ + H E + +L D A + T + +F F+
Sbjct: 303 NFNNELLESAEVSFTRIKTAYENVKHRLEISANLADDA-------QEWETKLQQFKLRFI 355
Query: 432 ASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMS 491
M DD +T ++ L D + N L + L++ + VLGL
Sbjct: 356 KEMDDDFNTANAISVLFDIAREANVYLQSEHTSSTI-----LSSFITLFEEITEVLGLSL 410
Query: 492 TGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMD 551
+ E+L ++ + I++R ARKN+ + ++D IR L A+ I L D
Sbjct: 411 SAEKELL--------------DEDIDALIQERNDARKNRNFARADEIRDQLKALNIILED 456
Query: 552 SPVGTTWR 559
+P G W+
Sbjct: 457 TPQGVRWK 464
>gi|152973937|ref|YP_001373454.1| cysteinyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
gi|187629791|sp|A7GK01.1|SYC_BACCN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|152022689|gb|ABS20459.1| cysteinyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 465
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/489 (43%), Positives = 292/489 (59%), Gaps = 37/489 (7%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++R++E P E KV MYVCG T Y+ HIG+AR + FD + RYL H GY+V Y
Sbjct: 5 IYNTLTRQKEEFIPLEEKKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEHKGYDVQY 64
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V NFTDVDDK+I ANELGED +++ R+ E + +D+ L C +V PRV+++M II+
Sbjct: 65 VSNFTDVDDKLIKAANELGEDVPTIAERFIEAYFEDVTALGCKHATVHPRVTENMDIIIE 124
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
I ++++ G+AY +GDVY+ +F YG+LS + +ED R G R+ V +K++P DFALW
Sbjct: 125 FIQELVNKGYAYESEGDVYYRTKEFEGYGKLSHQAIEDLRHGARIEVGEKKQDPLDFALW 184
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AKEGE FWESPWG GRPGWHIECSAM+ YLG S DIH GG DL FPHHENEIAQS A
Sbjct: 185 KAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLSFPHHENEIAQSEA 244
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
YW+HNG++ I++EKMSKSLGNF + +++ Y P +R F++ HYR PIN+
Sbjct: 245 LTGKPFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINF 304
Query: 378 SVVQLESAS---ERIFYIYQTL-HDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLAS 433
S L+S + ERI Y+ L H E + L D + + +F + F A+
Sbjct: 305 SEELLQSTNNGLERIKTTYRNLKHRIESSTDLTDH-------NEKWLAEMKEFQSAFEAA 357
Query: 434 MSDDLHTTVVLAALSDPLKTINDLL---HTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
M DD +T + L + N L HT K +A + LE R +LGL+
Sbjct: 358 MDDDFNTANAITELYNLANHANQYLLEEHTSKVVIEAY----INQLEMLFR----ILGLV 409
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
T + +L + ++ I+ R ARKN+++ +D IR DL I L
Sbjct: 410 FT---------------KEELLDKEIEALIQKRIEARKNRDFALADKIRDDLKERNIILE 454
Query: 551 DSPVGTTWR 559
D+ GT W+
Sbjct: 455 DTAQGTRWK 463
>gi|186476148|ref|YP_001857618.1| cysteinyl-tRNA synthetase [Burkholderia phymatum STM815]
gi|184192607|gb|ACC70572.1| cysteinyl-tRNA synthetase [Burkholderia phymatum STM815]
Length = 465
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/490 (44%), Positives = 289/490 (58%), Gaps = 36/490 (7%)
Query: 76 LWLYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEV 135
L +YNT++R ++ P EG+V MYVCG+T YD H+GHARV V FD++ R+LR LGY+V
Sbjct: 4 LRIYNTLARDKQNFVPLHEGEVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGYKV 63
Query: 136 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHI 195
YVRN TD+DDKII RA E GE SL+ R+ H+D L P +EPR ++ +P +
Sbjct: 64 TYVRNITDIDDKIIRRAVENGETIKSLTDRFIAALHEDADALGIERPDLEPRATEFVPQM 123
Query: 196 IDMITQILDNGFAYRV-DGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADF 254
+ MI ++ NG+AY+ DGDV ++V KF YG LSG+ LED RAGERVA + K++P DF
Sbjct: 124 LGMIEKLEANGYAYQAADGDVNYAVRKFENYGALSGKSLEDLRAGERVAANDAKQDPLDF 183
Query: 255 ALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENE 311
LWK +K EP WES +G GRPGWHIECSAM LG FDIHGGG DL FPHHENE
Sbjct: 184 VLWKQSKPDEPADTGWESKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENE 243
Query: 312 IAQSCAACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHY 371
IAQS A + ++YW+HNG+V ID+EKMSKSLGNFFTIR+V+ Y +R F+ HY
Sbjct: 244 IAQSEGATRQTFVNYWMHNGYVQIDNEKMSKSLGNFFTIREVLAKYDAEVVRFFIARAHY 303
Query: 372 RSPINYSVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINK-FHNDF 430
RSP+NYS V L+ A + +Y ALKD+ P N+ + F
Sbjct: 304 RSPLNYSDVHLDDARGALARLY---------------TALKDTPPQAGEVDWNEAYAQRF 348
Query: 431 LASMSDDLHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLM 490
A+M+DD +T V ++ L + + +N ++ L L + R
Sbjct: 349 RAAMNDDFNTPVAVSVLFELVSEVNRTRDAALARQLHGLGLVLGLLGREPR--------- 399
Query: 491 STGYSEVLLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALM 550
V LQ ++ L + +I R A++ K+Y ++D IRK+L GIAL
Sbjct: 400 ------VYLQQAGASVGEGALDTAAIEAKIAARVAAKQAKDYAEADRIRKELLDAGIALE 453
Query: 551 DSPVG-TTWR 559
D P G T WR
Sbjct: 454 DKPGGLTEWR 463
>gi|333896167|ref|YP_004470041.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333111432|gb|AEF16369.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 464
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/482 (40%), Positives = 289/482 (59%), Gaps = 22/482 (4%)
Query: 78 LYNTMSRKRELVKPKVEGKVGMYVCGVTPYDLSHIGHARVYVTFDVLYRYLRHLGYEVCY 137
+YNT++RK+E P + V MYVCG T Y+ HIG+AR ++ FD + RYL + GY+V Y
Sbjct: 3 IYNTLTRKKEEFVPLNDNVVNMYVCGPTVYNFIHIGNARAFIVFDTVRRYLEYKGYKVNY 62
Query: 138 VRNFTDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIID 197
V+NFTD+DDK+I R++E L+ RY EE+ +D L + PR ++++ II+
Sbjct: 63 VQNFTDIDDKLIKRSHEENTTVKELADRYIEEYFKDADSLGIKRATFHPRATENIKEIIE 122
Query: 198 MITQILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALW 257
+ +++D GFAY DG+VY+ KF +YG+LS + +++ +AG R+ V+ KKNP DF LW
Sbjct: 123 FVKKLIDKGFAYEKDGNVYYDTTKFKDYGKLSHKNIDELKAGARIEVNEDKKNPTDFVLW 182
Query: 258 KSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCA 317
K+AKEGEP+W+SPWG GRPGWHIECS MS +LG + DIH GG DL+FPHHENEIAQS A
Sbjct: 183 KAAKEGEPYWDSPWGKGRPGWHIECSTMSTKFLGKTLDIHAGGPDLIFPHHENEIAQSEA 242
Query: 318 ACNNSHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINY 377
A + YW+H G++ I++EKMSKS NFFT+R V+ Y P LR F++ +HYR+PINY
Sbjct: 243 ANDAEFAKYWMHIGYLNINNEKMSKSKNNFFTVRDVISQYDPEVLRFFMLMSHYRNPINY 302
Query: 378 SVVQLESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPDTVTSINKFHNDFLASMSDD 437
S +E A + T+++ + L + + L D ++ F +M DD
Sbjct: 303 SQDLIEQAKNGYLRLSNTVYNLQHLLDVAEDRQLSDE-EKAYKEKYEEYRRKFEEAMDDD 361
Query: 438 LHTTVVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEV 497
+T ++ + + ++ IN + K E + + N+ +VLG+
Sbjct: 362 FNTADAISVIFEMVRDINSNIDGNSPK------ELIKYILDVFLNLSSVLGI-------- 407
Query: 498 LLQLREKALKRADLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTT 557
K+ +L +D++ + IE R ARK K + ++D IR +L GI L D+P G
Sbjct: 408 -------TYKKKELLDDEIKELIEKRQEARKAKNWAEADRIRDELKKQGIVLEDTPNGVR 460
Query: 558 WR 559
W+
Sbjct: 461 WK 462
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,077,478,023
Number of Sequences: 23463169
Number of extensions: 389757371
Number of successful extensions: 993994
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6223
Number of HSP's successfully gapped in prelim test: 963
Number of HSP's that attempted gapping in prelim test: 966429
Number of HSP's gapped (non-prelim): 9567
length of query: 574
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 426
effective length of database: 8,886,646,355
effective search space: 3785711347230
effective search space used: 3785711347230
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)