Your job contains 1 sequence.
>008193
MPGAGKKVVKHSESGKSCFPKKDSGSELIASLKFKKGSKISKSKKLRSKSRCQSKTVNST
LLKRTVAESHSKGAGDDFARSKSISQKNLHIKIDRKGSKNWASSKHKGKNSALVISKGNG
EVVDGDGETKKLRKGRSKKRRKEKVELDEASRLQRRTRYLLIKMKLEQNLIDAYSGEGWK
GHSREKIRPEKELQRAKKQILKCKIGIRDAIRQLDSLSSVGCIEGSVIATDGSVHHEHII
CAKCKLREAFPDNDIVLCDGTCNCAFHQKCLDPPLDTESIPPGDQGWFCKFCECKMEIIE
SMNAHIGTSFSVNSNWQDIFKEEAAFPDGCSALLNQEEEWPSDDSEDDDYNPERRENSCS
ISRAGTDDDPSSSTSLSWFSDSETFSESMSEDEDWGPAKRRRKEKESDAVNSLMTLYGSE
EKYSKVKTAEVKKKLPSNAKIRRSFHRMPPNAVEKLRQVFAENELPSRIVKENLSKELSL
EPEKVNKWFKNARYLALKARKVESARQVSGSPRISKESSLETEKKNADVLTLKNSLEETL
ICSPKSLKKIHPKRIQNQSAVAAASRKISRKELL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008193
(574 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2005538 - symbol:PRHA "pathogenesis related ho... 815 1.3e-115 2
TAIR|locus:2090694 - symbol:HAT3.1 species:3702 "Arabidop... 509 1.3e-59 2
UNIPROTKB|J3QQU3 - symbol:PHF12 "PHD finger protein 12" s... 114 6.4e-06 1
UNIPROTKB|K7EQP5 - symbol:PHF12 "PHD finger protein 12" s... 104 7.6e-05 1
TAIR|locus:2089606 - symbol:AT3G14740 species:3702 "Arabi... 123 0.00012 1
POMBASE|SPCC4G3.07c - symbol:phf1 "PHD finger containing ... 122 0.00026 1
WB|WBGene00020485 - symbol:ceh-54 species:6239 "Caenorhab... 115 0.00032 1
SGD|S000004680 - symbol:RCO1 "Essential subunit of the hi... 123 0.00035 1
UNIPROTKB|I3LTW3 - symbol:I3LTW3 "Uncharacterized protein... 97 0.00043 1
POMBASE|SPAC16C9.05 - symbol:cph1 "Clr6 histone deacetyla... 119 0.00045 1
TAIR|locus:2195945 - symbol:AT1G77250 "AT1G77250" species... 120 0.00052 1
UNIPROTKB|H9KZW6 - symbol:H9KZW6 "Uncharacterized protein... 121 0.00063 1
>TAIR|locus:2005538 [details] [associations]
symbol:PRHA "pathogenesis related homeodomain protein A"
species:3702 "Arabidopsis thaliana" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR001965
InterPro:IPR009057 InterPro:IPR019787 Pfam:PF00046 Pfam:PF00628
PROSITE:PS50016 PROSITE:PS50071 SMART:SM00249 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006952 GO:GO:0009733 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AL050352 EMBL:AL161575 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:L21991 EMBL:U48864
IPI:IPI00540289 PIR:T08555 RefSeq:NP_194723.1 UniGene:At.19983
ProteinModelPortal:P48785 SMR:P48785 IntAct:P48785 STRING:P48785
PaxDb:P48785 PRIDE:P48785 EnsemblPlants:AT4G29940.1 GeneID:829117
KEGG:ath:AT4G29940 TAIR:At4g29940 eggNOG:NOG311547
HOGENOM:HOG000115692 InParanoid:P48785 OMA:MTEESHE PhylomeDB:P48785
ProtClustDB:CLSN2716723 Genevestigator:P48785 GermOnline:AT4G29940
Uniprot:P48785
Length = 796
Score = 815 (292.0 bits), Expect = 1.3e-115, Sum P(2) = 1.3e-115
Identities = 144/191 (75%), Positives = 170/191 (89%)
Query: 145 VELDEASRLQRRTRYLLIKMKLEQNLIDAYSGEGWKGHSREKIRPEKELQRAKKQILKCK 204
VE+D++ RLQRRTRYLLIKMK++QNLIDAY+ EGWKG SREKIRP+KEL+RA+K+IL CK
Sbjct: 97 VEVDDSLRLQRRTRYLLIKMKMQQNLIDAYATEGWKGQSREKIRPDKELERARKEILNCK 156
Query: 205 IGIRDAIRQLDSLSSVGCIEGSVIATDGSVHHEHIICAKCKLREAFPDNDIVLCDGTCNC 264
+G+RDAIRQLD LSSVG +E VIA+DGS+HH+HI CA+C REAFPDNDI+LCDGTCN
Sbjct: 157 LGLRDAIRQLDLLSSVGSMEEKVIASDGSIHHDHIFCAECNSREAFPDNDIILCDGTCNR 216
Query: 265 AFHQKCLDPPLDTESIPPGDQGWFCKFCECKMEIIESMNAHIGTSFSVNSNWQDIFKEEA 324
AFHQKCLDPPL+TESIPPGDQGWFCKFC+CK+EII++MNA IGT F V+SNWQDIF EEA
Sbjct: 217 AFHQKCLDPPLETESIPPGDQGWFCKFCDCKIEIIDTMNAQIGTHFPVDSNWQDIFNEEA 276
Query: 325 AFPDGCSALLN 335
+ P G A +N
Sbjct: 277 SLPIGSEATVN 287
Score = 345 (126.5 bits), Expect = 1.3e-115, Sum P(2) = 1.3e-115
Identities = 76/160 (47%), Positives = 108/160 (67%)
Query: 387 ESMSEDEDWGPAKRRRKEKESDAVNSLMTLYGSEEK-YSKVKTAEVKKK---LPSNAKIR 442
E SEDEDWGP RR++++ESDA ++L+T+ S +K V+T E ++ N R
Sbjct: 395 EQGSEDEDWGPNDRRKRKRESDAGSTLVTMCESSKKDQDVVETLEQSERDSVSVENKGGR 454
Query: 443 RSFHRMPPNAVEKLRQVFAENELPSRIVKENLSKELSLEPEKVNKWFKNARYLALKARKV 502
R R+P NAVEKLRQVFAE ELPS+ V++ L+KELSL+PEKVNKWFKN RY+AL+ RK
Sbjct: 455 RRMFRLPRNAVEKLRQVFAETELPSKAVRDRLAKELSLDPEKVNKWFKNTRYMALRNRKT 514
Query: 503 ESARQVSGSPRISK-ESSLETE-KKNADVLTLKNSLEETL 540
ES +Q S +S +S E + N + ++++L++T+
Sbjct: 515 ESVKQPGDSKTVSGGDSGPEAVMENNTETNEVQDTLDDTV 554
Score = 53 (23.7 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 30/111 (27%), Positives = 47/111 (42%)
Query: 383 ETFSESMSED-EDWGPAKRRRKEKESDAVNSLMTLYGSEE--KYSKVKTAEVKKKLPSNA 439
ET S+ M E E+ + E S M EE + +KTA +K+ S
Sbjct: 623 ETESKMMKEPHEELSSEMSLKTAAEEKETESKMIEEPHEELSREMSLKTAVEEKETES-- 680
Query: 440 KIRRSFHRMPPNAVEKLRQVFAENELPSRIVKEN---LSKELSLEPEKVNK 487
K+ H N+ L E E S++ +E+ LS E+SLE ++ +
Sbjct: 681 KMMEEPHD-ELNSEMSLSTAVEEKETGSKMTEESHEELSNEMSLEEKETGR 730
Score = 51 (23.0 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 31/130 (23%), Positives = 64/130 (49%)
Query: 456 LRQVFAENELPSRIVKE---NLSKELSLEPEKVNKWFKNARYLALKARKVESARQVSGSP 512
L+ ENE S+++KE LS E+SL+ K ++ ++ E +R++S
Sbjct: 615 LKTAVEENETESKMMKEPHEELSSEMSLKTAAEEKETESKM---IEEPHEELSREMSLKT 671
Query: 513 RISK---ESSLETE---KKNADVLTLKNSLEETLICSPKSLKKIHPKRIQNQSAVAA--A 564
+ + ES + E + N++ ++L ++EE S K ++ H + + N+ ++
Sbjct: 672 AVEEKETESKMMEEPHDELNSE-MSLSTAVEEKETGS-KMTEESH-EELSNEMSLEEKET 728
Query: 565 SRKISRKELL 574
RK++ +E L
Sbjct: 729 GRKMTEEEEL 738
>TAIR|locus:2090694 [details] [associations]
symbol:HAT3.1 species:3702 "Arabidopsis thaliana"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS;RCA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0051276 "chromosome
organization" evidence=RCA] [GO:0003677 "DNA binding" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001965 InterPro:IPR009057
InterPro:IPR019787 Pfam:PF00046 Pfam:PF00628 PROSITE:PS00027
PROSITE:PS50016 PROSITE:PS50071 SMART:SM00249 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AB025624 EMBL:X69512
EMBL:AK117105 EMBL:BT005965 IPI:IPI00537420 PIR:S31437
RefSeq:NP_188582.1 UniGene:At.19694 ProteinModelPortal:Q04996
SMR:Q04996 IntAct:Q04996 STRING:Q04996 PaxDb:Q04996 PRIDE:Q04996
EnsemblPlants:AT3G19510.1 GeneID:821485 KEGG:ath:AT3G19510
TAIR:At3g19510 eggNOG:NOG79337 HOGENOM:HOG000112850
InParanoid:Q04996 OMA:KEGECET PhylomeDB:Q04996
ProtClustDB:CLSN2915378 Genevestigator:Q04996 Uniprot:Q04996
Length = 723
Score = 509 (184.2 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 93/180 (51%), Positives = 126/180 (70%)
Query: 146 ELDEASRLQRRTRYLLIKMKLEQNLIDAYSGEGWKGHSREKIRPEKELQRAKKQILKCKI 205
E DE +R++++ RY L ++ EQ+LIDAYS EGWKG S EKIRPEKEL+RA K+IL+ K+
Sbjct: 173 EDDEYTRIKKKLRYFLNRINYEQSLIDAYSLEGWKGSSLEKIRPEKELERATKEILRRKL 232
Query: 206 GIRDAIRQLDSLSSVGCIEGSVIATDGSVHHEHIICAKCKLREAFPDNDIVLCDGTCNCA 265
IRD + LD+L + G + S+ TDG + E I CAKC ++ DNDI+LCDG C+
Sbjct: 233 KIRDLFQHLDTLCAEGSLPESLFDTDGEISSEDIFCAKCGSKDLSVDNDIILCDGFCDRG 292
Query: 266 FHQKCLDPPLDTESIPPGDQGWFCKFCECKMEIIESMNAHIGTSFSVNSNWQDIFKEEAA 325
FHQ CL+PPL E IPP D+GW C C+CK + ++ +N +GT FSV+ +W+ IF E AA
Sbjct: 293 FHQYCLEPPLRKEDIPPDDEGWLCPGCDCKDDSLDLLNDSLGTKFSVSDSWEKIFPEAAA 352
Score = 120 (47.3 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 41/145 (28%), Positives = 68/145 (46%)
Query: 390 SEDEDWGPAKRRRKEKESDAVNSL-MTLYGSEEKYSKVKTAEVKKKLPSNAKIRRSFHRM 448
S ED K RK K +D ++L M G E + E++K S K +
Sbjct: 572 SNAEDHTSKKLIRKSKRADKKDTLEMPQEGPGENGG---SGEIEKSSSSACK------QT 622
Query: 449 PPNAVEKLRQVFAENELPSRIVKENLSKELSLEPEKVNKWFKNARYLALKARKVESARQV 508
P ++L F EN+ P + KE+L+KEL + ++VN WFK+ R+ ++ ++ + S V
Sbjct: 623 DPKT-QRLYISFQENQYPDKATKESLAKELQMTVKQVNNWFKHRRW-SINSKPLVSEENV 680
Query: 509 SGSPRISKESSLETEKKNADVLTLK 533
+ KE ET + T++
Sbjct: 681 E-KLKTGKEGECETSVAGSSKQTME 704
Score = 50 (22.7 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 32/124 (25%), Positives = 52/124 (41%)
Query: 388 SMSEDEDWGPAKRRRKE-KESDAVNSLMTLYGSEEKYSKVKTAEVKKKLPSNAKIRRSFH 446
S S+D+DW R KE ES+ + L K S KKL IR+S
Sbjct: 539 SSSDDDDWDKTARMGKEDSESEDEGDTVPL-----KQSSNAEDHTSKKL-----IRKSKR 588
Query: 447 RMPPNAVEKLRQVFAENELPSRIVKENLS--KELSLEPEKVNKWFKNARYLALKARKVES 504
+ +E ++ EN I K + S K+ + +++ F+ +Y KA K
Sbjct: 589 ADKKDTLEMPQEGPGENGGSGEIEKSSSSACKQTDPKTQRLYISFQENQYPD-KATKESL 647
Query: 505 ARQV 508
A+++
Sbjct: 648 AKEL 651
>UNIPROTKB|J3QQU3 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
ChiTaRS:PHF12 ProteinModelPortal:J3QQU3 Ensembl:ENST00000583524
Uniprot:J3QQU3
Length = 129
Score = 114 (45.2 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 238 HIICAKCKLREAFPDNDIVLCDGTCNCAFHQKCLDPPLDTESIPPGDQGWFCKFCECKME 297
H C CK D++ CD C AFH +C +PPL E +PPG+ W C C + +
Sbjct: 56 HDSCDSCK-----EGGDLLCCDH-CPAAFHLQCCNPPLSEEMLPPGE--WMCHRCTVRRK 107
Query: 298 II 299
++
Sbjct: 108 VL 109
>UNIPROTKB|K7EQP5 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000583747 Uniprot:K7EQP5
Length = 117
Score = 104 (41.7 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 238 HIICAKCKLREAFPDNDIVLCDGTCNCAFHQKCLDPPLDTESIPPGDQGWFC 289
H C CK D++ CD C AFH +C +PPL E +PPG+ W C
Sbjct: 74 HDSCDSCK-----EGGDLLCCDH-CPAAFHLQCCNPPLSEEMLPPGE--WMC 117
>TAIR|locus:2089606 [details] [associations]
symbol:AT3G14740 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
SMART:SM00249 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AB023038 KO:K11380
EMBL:AB493614 IPI:IPI00516474 RefSeq:NP_974313.1 UniGene:At.39180
ProteinModelPortal:Q9LUC1 SMR:Q9LUC1 STRING:Q9LUC1
EnsemblPlants:AT3G14740.2 GeneID:820702 KEGG:ath:AT3G14740
TAIR:At3g14740 HOGENOM:HOG000090334 InParanoid:Q9LUC1 OMA:CVIECSE
PhylomeDB:Q9LUC1 ProtClustDB:CLSN2688382 Genevestigator:Q9LUC1
Uniprot:Q9LUC1
Length = 343
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 34/106 (32%), Positives = 53/106 (50%)
Query: 190 EKELQRAKKQILKCKIGIRDAIRQLDSLSSVGCI-EGSVI-ATDGSVHHEH-IICAKCKL 246
EK ++ KK L + + + + D ++ + +G + +D V E I+CA C+
Sbjct: 103 EKSIE--KKSTLNVESSLE--VEEDDDKENIDPLGKGKALDLSDREVEDEDGIMCAVCQS 158
Query: 247 REAFPDNDIVLCDGTCNCAFHQKCLDPPLDTESIPPGDQGWFCKFC 292
+ P N IV CDG C+ H C PL ++IP GD WFC+ C
Sbjct: 159 TDGDPLNPIVFCDG-CDLMVHASCYGNPL-VKAIPEGD--WFCRQC 200
>POMBASE|SPCC4G3.07c [details] [associations]
symbol:phf1 "PHD finger containing protein Phf1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISM] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0033193 "Lsd1/2 complex" evidence=IDA]
[GO:0034605 "cellular response to heat" evidence=IEP] [GO:0031491
"nucleosome binding" evidence=IDA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
PomBase:SPCC4G3.07c GO:GO:0005634 GO:GO:0034605 GO:GO:0006355
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0033169 GO:GO:0019787 GO:GO:0033193
PIR:T41369 RefSeq:NP_587831.1 ProteinModelPortal:P87233
STRING:P87233 EnsemblFungi:SPCC4G3.07c.1 GeneID:2539406
KEGG:spo:SPCC4G3.07c eggNOG:NOG322639 OrthoDB:EOG44TSJ2
NextBio:20800570 Uniprot:P87233
Length = 461
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 27/76 (35%), Positives = 38/76 (50%)
Query: 240 ICAKCKLREAFPDNDIVLCDGTCNCAFHQKCLDPPLDTESIPPGDQGWFCKFCE---CKM 296
+C+ C+ + N IV CDG CN +HQ C PP+D ++ D WFC C+ K
Sbjct: 192 LCSVCQRGHSPLSNRIVFCDG-CNSPYHQLCHHPPIDDATVQDVDAEWFCMKCQYRRAKQ 250
Query: 297 EIIESMNAH-IGTSFS 311
+ M A +G S S
Sbjct: 251 PLETGMTAQDLGLSES 266
>WB|WBGene00020485 [details] [associations]
symbol:ceh-54 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:FO080546 HSSP:P06601
GeneTree:ENSGT00700000104256 PIR:T16866 RefSeq:NP_509037.1
UniGene:Cel.367 ProteinModelPortal:Q22459 SMR:Q22459 DIP:DIP-24677N
IntAct:Q22459 MINT:MINT-1110113 EnsemblMetazoa:T13C5.4
GeneID:188474 KEGG:cel:CELE_T13C5.4 UCSC:T13C5.4 CTD:188474
WormBase:T13C5.4 eggNOG:NOG295926 HOGENOM:HOG000020434
InParanoid:Q22459 OMA:ATRDSEN NextBio:938936 Uniprot:Q22459
Length = 220
Score = 115 (45.5 bits), Expect = 0.00032, P = 0.00032
Identities = 32/111 (28%), Positives = 58/111 (52%)
Query: 428 TAEVKKKLPSNAKI-RRSFHRMP--PNAVEKLRQVFAENELPSRIVKENLSKELSLEPEK 484
T ++ +K +N R+ +R+ N ++++ +VFAEN+ P + +E L+ ++ L E+
Sbjct: 28 TKKITRKRSNNFNPDRKKRNRITFDANQIDEMEKVFAENQYPDTMSREKLANKIQLHEER 87
Query: 485 VNKWFKNARYLALKARKVESARQVSGSPRISKESSLETEKKNADVLTLKNS 535
V WF+N R A R+ + P I+K + E EK D TL ++
Sbjct: 88 VQIWFQNRR--AKYRREQKQTGHPYEPPSITKNPTGEKEKTQ-DCTTLTSA 135
>SGD|S000004680 [details] [associations]
symbol:RCO1 "Essential subunit of the histone deacetylase
Rpd3S complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0060195 "negative regulation of
antisense RNA transcription" evidence=IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IDA] [GO:0016575
"histone deacetylation" evidence=IMP] [GO:0032221 "Rpd3S complex"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=IMP] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IGI]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SGD:S000004680 GO:GO:0046872 GO:GO:0008270 EMBL:Z48952
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0033698 GO:GO:0016575 GO:GO:0030174
GO:GO:0032221 GO:GO:0060195 eggNOG:NOG145066
GeneTree:ENSGT00440000033777 PIR:S52835 RefSeq:NP_013791.1
ProteinModelPortal:Q04779 SMR:Q04779 DIP:DIP-1959N IntAct:Q04779
MINT:MINT-497703 STRING:Q04779 PaxDb:Q04779 PeptideAtlas:Q04779
EnsemblFungi:YMR075W GeneID:855097 KEGG:sce:YMR075W CYGD:YMR075w
HOGENOM:HOG000066043 OMA:FLCCDTC OrthoDB:EOG4TQQJV NextBio:978414
Genevestigator:Q04779 GermOnline:YMR075W Uniprot:Q04779
Length = 684
Score = 123 (48.4 bits), Expect = 0.00035, P = 0.00035
Identities = 52/171 (30%), Positives = 74/171 (43%)
Query: 159 YLLIKMKLEQNLIDAYSGEGWKGH--SREKIR-PEKELQRAKKQILKCKIGIRDAIRQLD 215
+L M E N+ S GW G +R + R PE + K ++ KI I D
Sbjct: 170 FLTENMTEESNI---RSTIGWNGDIINRTRDREPESDRDNKKLSNIRTKI-ILSTNATYD 225
Query: 216 SLSSV-GCIEGSVIATDGSVHHEHIICAKCKLREAFPDNDIV---------LCDGTCNCA 265
S S + G + S+ +T + E I K F + D LC TC +
Sbjct: 226 SKSKLFG--QNSIKSTSNA--SEKIFRDKNNSTIDFENEDFCSACNQSGSFLCCDTCPKS 281
Query: 266 FHQKCLDPPLDTESIPPGDQGWFCKFCECKMEIIESMNAHIGTSFSVNSNW 316
FH CLDPP+D ++P GD W C ECK +I +N + T + SN+
Sbjct: 282 FHFLCLDPPIDPNNLPKGD--WHCN--ECKFKIF--INNSMATLKKIESNF 326
>UNIPROTKB|I3LTW3 [details] [associations]
symbol:I3LTW3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00390000008296
EMBL:AEMK01185240 EMBL:CU928954 Ensembl:ENSSSCT00000025343
Uniprot:I3LTW3
Length = 113
Score = 97 (39.2 bits), Expect = 0.00043, P = 0.00043
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 256 VLCDGTCNCAFHQKCLDPPLDTESIPPGDQGWFCKFCEC-KMEIIES 301
VLCD CN A+H CL+PPLD P ++ W+C C+ E++++
Sbjct: 3 VLCD-ECNMAYHIYCLNPPLDKV---PEEEYWYCPSCKTDSSEVVKA 45
>POMBASE|SPAC16C9.05 [details] [associations]
symbol:cph1 "Clr6 histone deacetylase associated PHD
protein-1 Cph1" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0019787 "small conjugating protein ligase activity"
evidence=ISM] [GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
PomBase:SPAC16C9.05 GO:GO:0005829 EMBL:CU329670 GO:GO:0046872
GO:GO:0071276 GO:GO:0071585 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG317492 GO:GO:0019787
GO:GO:0016575 GO:GO:0032221 PIR:T37778 RefSeq:NP_593079.1
ProteinModelPortal:Q09819 STRING:Q09819 EnsemblFungi:SPAC16C9.05.1
GeneID:2542318 KEGG:spo:SPAC16C9.05 OrthoDB:EOG4N6053
NextBio:20803379 Uniprot:Q09819
Length = 404
Score = 119 (46.9 bits), Expect = 0.00045, P = 0.00045
Identities = 24/55 (43%), Positives = 30/55 (54%)
Query: 241 CAKCKLREAFPDNDIVLCDGTCNCAFHQKCLDPPLDTESIPPGDQGWFCKFCECK 295
C+ C R F + C+G C C+FH CL+PPL E+IP G WFC C K
Sbjct: 120 CSACGGRGLF-----ICCEG-CPCSFHLSCLEPPLTPENIPEGS--WFCVTCSIK 166
>TAIR|locus:2195945 [details] [associations]
symbol:AT1G77250 "AT1G77250" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:BT025330
IPI:IPI00544228 RefSeq:NP_177849.2 UniGene:At.50042
ProteinModelPortal:Q1JPM3 SMR:Q1JPM3 PaxDb:Q1JPM3 PRIDE:Q1JPM3
EnsemblPlants:AT1G77250.1 GeneID:844061 KEGG:ath:AT1G77250
TAIR:At1g77250 eggNOG:NOG147697 HOGENOM:HOG000090483
InParanoid:Q1JPM3 OMA:CQHAFLN PhylomeDB:Q1JPM3
Genevestigator:Q1JPM3 Uniprot:Q1JPM3
Length = 522
Score = 120 (47.3 bits), Expect = 0.00052, P = 0.00052
Identities = 29/74 (39%), Positives = 38/74 (51%)
Query: 234 VHHEHIICAKCKLREAFPDND---IVLCDGTCNCAFHQKCLDPPLDTESIPPGDQGWFCK 290
+H C+ C R D D IVLCDG C+ A+H C+ PP ES+P G+ WFC
Sbjct: 393 LHGVRWYCSSCLCRNCLTDKDDDKIVLCDG-CDDAYHIYCMRPPC--ESVPNGE--WFCT 447
Query: 291 FCECKMEIIESMNA 304
CK I++ A
Sbjct: 448 --ACKAAILKVQKA 459
>UNIPROTKB|H9KZW6 [details] [associations]
symbol:H9KZW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA] [GO:0035097
"histone methyltransferase complex" evidence=IEA] [GO:0043627
"response to estrogen stimulus" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00690000101661
EMBL:AADN02067269 EMBL:AADN02067270 Ensembl:ENSGALT00000020812
OMA:ELLPCEL Uniprot:H9KZW6
Length = 725
Score = 121 (47.7 bits), Expect = 0.00063, P = 0.00063
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 237 EHIICAKCKLREAFPDNDIVLCDGTCNCAFHQKCLDPPLDTESIPPGDQGWFCKFCEC 294
E I+C C +A + ++LCD C+ ++H CLDPPL T +P G GW CK+C C
Sbjct: 663 ECIVCEVCG--KASDPSRLLLCDD-CDISYHTYCLDPPLQT--VPKG--GWKCKWCVC 713
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.128 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 574 501 0.00085 119 3 11 23 0.46 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 617 (66 KB)
Total size of DFA: 289 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 48.83u 0.12s 48.95t Elapsed: 00:00:02
Total cpu time: 48.83u 0.12s 48.95t Elapsed: 00:00:02
Start: Tue May 21 10:02:23 2013 End: Tue May 21 10:02:25 2013