Your job contains 1 sequence.
>008196
MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG
TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDETTCKAETAL
LGGAVGDSILMPDPLPSVTTSSVSLSTAVSGSRPNSRSGPSAEASSLTVGGTGEETPQRS
YLRPGGPLARLHAPRSSYNFKDDMEVFSPLVDVQPITPSLDKLWDGHEGAKKDHLPIDKK
PSSMLFPSSSRRFPYAEDGSNEHSVFDWKSSSTSKQDDARSFALLGSTPSPSSKSEDSSI
TPPEAWGGEKLSDKFALLRQPLNMPSRYGMSTSSGLTSSSMYSGLQDVSLSQTSISSLTD
SNLSRENMRTKDVTSYQETSSLGFPEHLSSSFPSLSLGTKGILGSGNLDSSRPSSLTLTH
REPRRTYAERISTTSGTSLSVGSPKTKKTGAETKEELLSNFLSRSDTSAVVEPGIPPAIN
GGMSQSLKSPQPDPPQGSNFTLQLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQET
QMSNVMSSILENQAELMKEIKSLRKENHQLRQLL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008196
(574 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2153629 - symbol:NEDD1 "AT5G05970" species:370... 858 8.8e-130 2
UNIPROTKB|Q3B7M6 - symbol:NEDD1 "Protein NEDD1" species:9... 161 2.9e-20 2
UNIPROTKB|E2R5C6 - symbol:NEDD1 "Uncharacterized protein"... 161 1.3e-19 2
UNIPROTKB|Q8NHV4 - symbol:NEDD1 "Protein NEDD1" species:9... 157 3.4e-19 2
UNIPROTKB|G3V3F1 - symbol:NEDD1 "Neural cell expressed, d... 157 3.5e-19 2
RGD|1307750 - symbol:Nedd1 "neural precursor cell express... 158 1.1e-18 2
MGI|MGI:97293 - symbol:Nedd1 "neural precursor cell expre... 155 2.4e-18 2
UNIPROTKB|F1P0W9 - symbol:NEDD1 "Uncharacterized protein"... 151 2.9e-17 2
ZFIN|ZDB-GENE-040426-2906 - symbol:nedd1 "neural precurso... 126 2.2e-11 2
UNIPROTKB|G3V4I9 - symbol:NEDD1 "Protein NEDD1" species:9... 153 3.8e-10 1
UNIPROTKB|F1SQR9 - symbol:NEDD1 "Uncharacterized protein"... 157 2.5e-08 1
DICTYBASE|DDB_G0282793 - symbol:wdr61 "WD40 repeat-contai... 130 1.4e-05 1
>TAIR|locus:2153629 [details] [associations]
symbol:NEDD1 "AT5G05970" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0000919 "cell plate
assembly" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0009553 "embryo sac development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IMP] [GO:0032467
"positive regulation of cytokinesis" evidence=IMP] [GO:0060236
"regulation of mitotic spindle organization" evidence=IMP]
[GO:2000694 "regulation of phragmoplast microtubule organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GO:GO:0032467 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0009555 eggNOG:COG2319
GO:GO:0009553 GO:GO:0060236 GO:GO:0005828 EMBL:AB017060
UniGene:At.32924 UniGene:At.66718 KO:K16547 GO:GO:0000919
IPI:IPI00540677 RefSeq:NP_001119176.1 ProteinModelPortal:B3H5K9
SMR:B3H5K9 PaxDb:B3H5K9 PRIDE:B3H5K9 EnsemblPlants:AT5G05970.2
GeneID:830483 KEGG:ath:AT5G05970 TAIR:At5g05970
HOGENOM:HOG000243035 OMA:TITGVMY PhylomeDB:B3H5K9
ProtClustDB:CLSN2690825 Genevestigator:B3H5K9 GO:GO:2000694
Uniprot:B3H5K9
Length = 782
Score = 858 (307.1 bits), Expect = 8.8e-130, Sum P(2) = 8.8e-130
Identities = 217/535 (40%), Positives = 282/535 (52%)
Query: 57 GDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDETTCKA 116
GD+G + + T+ ++ P + S+ + V+SL WQ +KPV ++E +
Sbjct: 273 GDNGYILVAGTSNGRVVFYDIRGKPQPVTVLHAFSNSEDVTSLSWQTSKPVIVNEKNYTS 332
Query: 117 ETALLGGAVGDSILMPDPLPXXXXXXXXXXXXXXXXXXXXXXXXXAEASSLTVGGTGEET 176
E ALLG V DS+++PDPLP ASS+ E+T
Sbjct: 333 EMALLGSTVEDSVVIPDPLPSTTPSASQSAMAPGSRGVSAST---VNASSV------EQT 383
Query: 177 PQRSYLRPGGPLARLHAPRSSYNFKDDMEVFSPLVDVQPITPSLDKLWDGHEGAK-KDHL 235
P R++L P GPL RLHA R++ ++ DDM VFSP++DV S++K W EG KDHL
Sbjct: 384 PNRNHLWPSGPLGRLHALRANDSYNDDMGVFSPIIDVS----SVEK-WADSEGYNNKDHL 438
Query: 236 PIDKKPSSMLFPSSSRRFPYAEDGSNEHSVFDWKSSSTSKQDDARS-FALLGXXXXXXXX 294
+D KPSS+LFPSSS+ + + ++GS EH +FDWK SSTSKQDD R+ F+ G
Sbjct: 439 VVDNKPSSLLFPSSSKGYSFGDNGSKEHPIFDWKPSSTSKQDDPRAAFSSFGSITPTASS 498
Query: 295 XXXXXXXXX-EAWGGEKLSDKFALLRQP--------LNMPSRXXXXXXXXXXXXXXXXXX 345
EAWGG+K S+KF L L+ PSR
Sbjct: 499 KSEDSALTPPEAWGGDKFSEKFNQLANEKFSDKFSHLHAPSRLAVSSTGASTSGSMFSSS 558
Query: 346 QDVSLSQTSISSLTDSNLSRENMRTKDVTSYQETSSLGFPEHLSSSFPSLSLGTKGILGS 405
+D LS + +N S E R +D +S ETSS ++ PS L TKGI
Sbjct: 559 RDFPLSHGQTNF---ANASLEFPRIRDFSSTFETSST----QTDNNLPSSPLFTKGITAP 611
Query: 406 GNLDSSRPSSLTLTHREPRRTYAERIXXXXXXXXXXX-----XPXXXXXXXXXXXXLLSN 460
GN+DS R S T R TYAERI P +L++
Sbjct: 612 GNIDSLRLSP-NFTRRFS--TYAERISTTSSFSDGASLSLGGSPKIKKTGSETREEVLNH 668
Query: 461 FLSRSDTSAVVEPGIPPAIN-GGMSQSLKSPQPDPPQGSNFTLQLFQRTLEETLDSFQKS 519
L+R +T E G P +N GG+ QS ++ Q SNFTLQLFQRTLE TLDSFQ S
Sbjct: 669 LLARPETVVATEAGAMPLMNQGGLKQS-QTDQQQVMGSSNFTLQLFQRTLEGTLDSFQNS 727
Query: 520 IHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 574
IH+D+RNLHIEILRQFHM E +MS V+SSILENQAE MKE+K LRKEN +LRQ L
Sbjct: 728 IHDDVRNLHIEILRQFHMHEMEMSKVLSSILENQAEQMKELKLLRKENQELRQRL 782
Score = 436 (158.5 bits), Expect = 8.8e-130, Sum P(2) = 8.8e-130
Identities = 80/100 (80%), Positives = 94/100 (94%)
Query: 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG 60
MYNCKDEHLAS+S+ GDLI+HNLASGA+A ELKDPN QVLR+LDYSR+SRHLLVTAGDDG
Sbjct: 142 MYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQVLRLLDYSRSSRHLLVTAGDDG 201
Query: 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFS-SDDKAVSSL 99
T+HLWDTTGRSPK+SWLKQHSAPTAG+ FS S++K ++S+
Sbjct: 202 TVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIASV 241
Score = 68 (29.0 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 14/66 (21%), Positives = 32/66 (48%)
Query: 34 DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDD 93
D E+ L + +S+ + + G + +WD R + LK H++ G+ ++ D
Sbjct: 89 DSAEECLSAISFSKKGSRYICSGGTGQIVKIWDLQ-RKLCIKKLKGHTSTITGVMYNCKD 147
Query: 94 KAVSSL 99
+ ++S+
Sbjct: 148 EHLASV 153
Score = 41 (19.5 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 48 NSRHLLVTA-GDDGTLHLWDTTGRS 71
N +L+V + G+D + LW G+S
Sbjct: 52 NHTNLVVASTGEDKKISLWRKNGQS 76
>UNIPROTKB|Q3B7M6 [details] [associations]
symbol:NEDD1 "Protein NEDD1" species:9913 "Bos taurus"
[GO:0045177 "apical part of cell" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0000242
"pericentriolar material" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0051301 GO:GO:0007067 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0045177 GO:GO:0005932 GO:GO:0000242 GO:GO:0000922
EMBL:BC107541 IPI:IPI00708143 RefSeq:NP_001030410.1
UniGene:Bt.41689 ProteinModelPortal:Q3B7M6 STRING:Q3B7M6
Ensembl:ENSBTAT00000002464 GeneID:519463 KEGG:bta:519463 CTD:121441
GeneTree:ENSGT00390000001561 HOGENOM:HOG000034642
HOVERGEN:HBG055623 InParanoid:Q3B7M6 KO:K16547 OMA:FSPIRDD
OrthoDB:EOG4NZTSQ NextBio:20872882 Uniprot:Q3B7M6
Length = 659
Score = 161 (61.7 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 32/101 (31%), Positives = 64/101 (63%)
Query: 471 VEPGIPPAINGGMSQSLKSPQPDPPQGSNFTLQLFQRTLEETLDSFQKSIHEDMRNLHIE 530
V G+ +++ + ++ + +P+ P S+ ++ Q ++ETLD F+++ H D+ NL +E
Sbjct: 558 VTAGVAGSLSEKIVDTIGNSRPNAPL-SSVQIRFIQNMIQETLDDFREACHRDIVNLQVE 616
Query: 531 ILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 571
+++QFHMQ +M +++ N+ L+ EI+ LR+EN +LR
Sbjct: 617 MIKQFHMQLNEMHSLLERYSVNEG-LVAEIERLREENKRLR 656
Score = 160 (61.4 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 40/133 (30%), Positives = 68/133 (51%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
YN D ++AS SLSG++ILH++ + + + Q +R L YS + LL + D+G
Sbjct: 127 YNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSIRHLKYSLFKKSLLGSVSDNGI 186
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDETTCKAETALL 121
+ LWD +SP ++ H AP +GI FS ++ + + + D ++ K L+
Sbjct: 187 VTLWDVNSQSPYHNFDSTHKAPASGICFSPVNELLFVTVGLDKRIILYDTSSKKLVKTLV 246
Query: 122 GGAVGDSI-LMPD 133
A ++ MPD
Sbjct: 247 ADAPLTAVDFMPD 259
Score = 62 (26.9 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHL-LVTAGDDG 60
++ + L + S SGD I+ + K L + E + S NS + LV+ G +
Sbjct: 42 WSSNNNFLVTASSSGDKIVVSSCK-CKPVPLLELGEGQKQTC-VSLNSTSMYLVSGGLNN 99
Query: 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSS 98
T+++WD + S LK H ++++ +D ++S
Sbjct: 100 TVNIWDLKSKRVHRS-LKDHKDEVTCVTYNWNDCYIAS 136
Score = 46 (21.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 55 TAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCW 101
++GDD + +WD + + V H+AP A+SS+CW
Sbjct: 9 SSGDD--VKIWDASSMT-LVDKFNPHTAP----------HAISSVCW 42
>UNIPROTKB|E2R5C6 [details] [associations]
symbol:NEDD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045177 "apical part of cell" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0000242 "pericentriolar material" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0045177 GO:GO:0005932 GO:GO:0000242
GO:GO:0000922 GeneTree:ENSGT00390000001561 OMA:FSPIRDD
EMBL:AAEX03009959 Ensembl:ENSCAFT00000010522 Uniprot:E2R5C6
Length = 734
Score = 161 (61.7 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 32/101 (31%), Positives = 64/101 (63%)
Query: 471 VEPGIPPAINGGMSQSLKSPQPDPPQGSNFTLQLFQRTLEETLDSFQKSIHEDMRNLHIE 530
V G+ +++ ++ ++ + +P+ P S ++ Q ++ETLD F+++ H D+ NL +E
Sbjct: 633 VTAGVASSLSEKIADTIGNNRPNAPLTS-VQIRFIQNMIQETLDDFREACHRDIVNLQVE 691
Query: 531 ILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 571
+++QFHMQ +M +++ N+ L+ EI+ LR+EN +LR
Sbjct: 692 MIKQFHMQLNEMHSLLERYSVNEG-LVAEIERLREENKRLR 731
Score = 155 (59.6 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 39/133 (29%), Positives = 67/133 (50%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
YN D ++AS SLSG++ILH++ + + + Q +R L YS + LL + D+G
Sbjct: 203 YNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLLGSVSDNGI 262
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDETTCKAETALL 121
+ LWD +SP ++ H AP +GI FS ++ + + + D ++ K L+
Sbjct: 263 VTLWDVNSQSPYHNFDSTHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKKLVKTLV 322
Query: 122 GGAVGDSI-LMPD 133
++ MPD
Sbjct: 323 ADTPLTAVDFMPD 335
Score = 58 (25.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 25/100 (25%), Positives = 46/100 (46%)
Query: 2 YNCKDEHLASISLSGDLIL--HNLASGAKAAELKDPNEQVLRVLDYSRNSRHL-LVTAGD 58
++ + L + S SGD I+ H EL + +Q S NS + LV+ G
Sbjct: 118 WSSNNNFLVTASSSGDKIVVSHYKNKPFLLFELGEGQKQTC----VSLNSTSMYLVSGGL 173
Query: 59 DGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSS 98
+ T+++WD + S LK H ++++ +D ++S
Sbjct: 174 NHTVNIWDLKSKRVHRS-LKDHKDEVTCVTYNWNDCYIAS 212
>UNIPROTKB|Q8NHV4 [details] [associations]
symbol:NEDD1 "Protein NEDD1" species:9606 "Homo sapiens"
[GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005813 "centrosome" evidence=IDA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005813 Reactome:REACT_115566
GO:GO:0000086 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:CH471054 CTD:121441 HOGENOM:HOG000034642 HOVERGEN:HBG055623
KO:K16547 OrthoDB:EOG4NZTSQ EMBL:AK093221 EMBL:AK303656
EMBL:AK315821 EMBL:AC007564 EMBL:AC013417 EMBL:BC027605
IPI:IPI00169345 IPI:IPI00789363 RefSeq:NP_001128647.1
RefSeq:NP_001128648.1 RefSeq:NP_001128649.1 RefSeq:NP_690869.1
UniGene:Hs.740471 ProteinModelPortal:Q8NHV4 SMR:Q8NHV4
DIP:DIP-48838N IntAct:Q8NHV4 STRING:Q8NHV4 PhosphoSite:Q8NHV4
DMDM:74762597 PaxDb:Q8NHV4 PRIDE:Q8NHV4 DNASU:121441
Ensembl:ENST00000266742 Ensembl:ENST00000411739
Ensembl:ENST00000429527 Ensembl:ENST00000457368 GeneID:121441
KEGG:hsa:121441 UCSC:uc001teu.4 GeneCards:GC12P097301
HGNC:HGNC:7723 HPA:HPA038591 MIM:600372 neXtProt:NX_Q8NHV4
PharmGKB:PA31531 InParanoid:Q8NHV4 PhylomeDB:Q8NHV4
GenomeRNAi:121441 NextBio:80736 ArrayExpress:Q8NHV4 Bgee:Q8NHV4
CleanEx:HS_NEDD1 Genevestigator:Q8NHV4 GermOnline:ENSG00000139350
Uniprot:Q8NHV4
Length = 660
Score = 157 (60.3 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 32/101 (31%), Positives = 63/101 (62%)
Query: 471 VEPGIPPAINGGMSQSLKSPQPDPPQGSNFTLQLFQRTLEETLDSFQKSIHEDMRNLHIE 530
V G+ +++ ++ S+ + + + P S ++ Q ++ETLD F+++ H D+ NL +E
Sbjct: 559 VTAGVASSLSEKIADSIGNNRQNAPLTS-IQIRFIQNMIQETLDDFREACHRDIVNLQVE 617
Query: 531 ILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 571
+++QFHMQ +M +++ N+ L+ EI+ LR+EN +LR
Sbjct: 618 MIKQFHMQLNEMHSLLERYSVNEG-LVAEIERLREENKRLR 657
Score = 154 (59.3 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 39/133 (29%), Positives = 67/133 (50%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
YN D ++AS SLSG++ILH++ + + + Q +R L YS + LL + D+G
Sbjct: 127 YNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLLGSVSDNGI 186
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDETTCKAETALL 121
+ LWD +SP ++ H AP +GI FS ++ + + + D ++ K L+
Sbjct: 187 VTLWDVNSQSPYHNFDSVHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKKLVKTLV 246
Query: 122 GGAVGDSI-LMPD 133
++ MPD
Sbjct: 247 ADTPLTAVDFMPD 259
Score = 60 (26.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 21/97 (21%), Positives = 45/97 (46%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
++ + L + S SGD I+ + L+ Q ++ + S +L V+ G + T
Sbjct: 42 WSSNNNFLVTASSSGDKIVVSSCKCKPVPLLELAEGQKQTCVNLNSTSMYL-VSGGLNNT 100
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSS 98
+++WD + S LK H ++++ +D ++S
Sbjct: 101 VNIWDLKSKRVHRS-LKDHKDQVTCVTYNWNDCYIAS 136
>UNIPROTKB|G3V3F1 [details] [associations]
symbol:NEDD1 "Neural cell expressed, developmentally
down-regulated 1, isoform CRA_c" species:9606 "Homo sapiens"
[GO:0000242 "pericentriolar material" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0045177
"apical part of cell" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0045177
EMBL:CH471054 GO:GO:0005932 GO:GO:0000242 GO:GO:0000922 CTD:121441
KO:K16547 OMA:FSPIRDD EMBL:AC007564 EMBL:AC013417
RefSeq:NP_001128647.1 UniGene:Hs.740471 GeneID:121441
KEGG:hsa:121441 HGNC:HGNC:7723 GenomeRNAi:121441 NextBio:80736
ProteinModelPortal:G3V3F1 SMR:G3V3F1 PRIDE:G3V3F1
Ensembl:ENST00000557644 ArrayExpress:G3V3F1 Bgee:G3V3F1
Uniprot:G3V3F1
Length = 667
Score = 157 (60.3 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 32/101 (31%), Positives = 63/101 (62%)
Query: 471 VEPGIPPAINGGMSQSLKSPQPDPPQGSNFTLQLFQRTLEETLDSFQKSIHEDMRNLHIE 530
V G+ +++ ++ S+ + + + P S ++ Q ++ETLD F+++ H D+ NL +E
Sbjct: 566 VTAGVASSLSEKIADSIGNNRQNAPLTS-IQIRFIQNMIQETLDDFREACHRDIVNLQVE 624
Query: 531 ILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 571
+++QFHMQ +M +++ N+ L+ EI+ LR+EN +LR
Sbjct: 625 MIKQFHMQLNEMHSLLERYSVNEG-LVAEIERLREENKRLR 664
Score = 154 (59.3 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 39/133 (29%), Positives = 67/133 (50%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
YN D ++AS SLSG++ILH++ + + + Q +R L YS + LL + D+G
Sbjct: 134 YNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLLGSVSDNGI 193
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDETTCKAETALL 121
+ LWD +SP ++ H AP +GI FS ++ + + + D ++ K L+
Sbjct: 194 VTLWDVNSQSPYHNFDSVHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKKLVKTLV 253
Query: 122 GGAVGDSI-LMPD 133
++ MPD
Sbjct: 254 ADTPLTAVDFMPD 266
Score = 60 (26.2 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 21/97 (21%), Positives = 45/97 (46%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
++ + L + S SGD I+ + L+ Q ++ + S +L V+ G + T
Sbjct: 49 WSSNNNFLVTASSSGDKIVVSSCKCKPVPLLELAEGQKQTCVNLNSTSMYL-VSGGLNNT 107
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSS 98
+++WD + S LK H ++++ +D ++S
Sbjct: 108 VNIWDLKSKRVHRS-LKDHKDQVTCVTYNWNDCYIAS 143
>RGD|1307750 [details] [associations]
symbol:Nedd1 "neural precursor cell expressed, developmentally
down-regulated 1" species:10116 "Rattus norvegicus" [GO:0000242
"pericentriolar material" evidence=IEA;ISO] [GO:0000922 "spindle
pole" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005813 "centrosome" evidence=ISO] [GO:0005814 "centriole"
evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0045177 "apical part of cell"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307750 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0045177
GO:GO:0005932 GO:GO:0000242 GO:GO:0000922
GeneTree:ENSGT00390000001561 OMA:FSPIRDD OrthoDB:EOG4NZTSQ
IPI:IPI00366204 Ensembl:ENSRNOT00000005463 UCSC:RGD:1307750
Uniprot:D3ZAH3
Length = 659
Score = 158 (60.7 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 33/101 (32%), Positives = 62/101 (61%)
Query: 471 VEPGIPPAINGGMSQSLKSPQPDPPQGSNFTLQLFQRTLEETLDSFQKSIHEDMRNLHIE 530
V G+ +++ + +L + +P P S ++ Q ++ETLD F+++ H D+ NL +E
Sbjct: 558 VTAGVASSLSEKIVDTLGNSRPAAPLTS-VQIRFIQNMIQETLDDFREACHRDIVNLQVE 616
Query: 531 ILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 571
+++QFHMQ +M +++ N+ L+ EI+ LR+EN +LR
Sbjct: 617 MIKQFHMQLNEMHSLLERYSVNEG-LVAEIERLREENKRLR 656
Score = 148 (57.2 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 37/133 (27%), Positives = 67/133 (50%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
YN D ++AS SLSG++ILH++ + + ++Q +R + YS + LL + D+G
Sbjct: 127 YNWNDCYIASGSLSGEIILHSVTTNTSSTPFGHGSKQPVRHIKYSLFRKSLLGSVSDNGV 186
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDETTCKAETALL 121
+ LWD +S S+ H AP +G+ FS ++ + + + D ++ K L+
Sbjct: 187 VTLWDVNSQSAYHSFDSTHKAPASGLCFSPVNELLFVTIGLDKRIILYDTSSKKLVKTLV 246
Query: 122 GGAVGDSI-LMPD 133
++ MPD
Sbjct: 247 ADTPLTAVDFMPD 259
Score = 57 (25.1 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 20/97 (20%), Positives = 43/97 (44%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
++ + L + S GD I+ + L+ Q +D + S +L + G + T
Sbjct: 42 WSSNNNFLVTASSGGDKIVVSSCKCKPVPLLELAEGQKQTCVDLNSTSMYL-ASGGLNNT 100
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSS 98
+++WD + S LK H ++++ +D ++S
Sbjct: 101 VNIWDLKSKRLHRS-LKDHKREVTCVAYNWNDCYIAS 136
>MGI|MGI:97293 [details] [associations]
symbol:Nedd1 "neural precursor cell expressed, developmentally
down-regulated gene 1" species:10090 "Mus musculus" [GO:0000242
"pericentriolar material" evidence=IDA] [GO:0000922 "spindle pole"
evidence=IDA] [GO:0000924 "gamma-tubulin ring complex, centrosomal"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005814 "centriole"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0007019 "microtubule
depolymerization" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0031109
"microtubule polymerization or depolymerization" evidence=ISO]
[GO:0045177 "apical part of cell" evidence=IDA] [GO:0051301 "cell
division" evidence=IEA] [GO:0070201 "regulation of establishment of
protein localization" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:97293 GO:GO:0051301
GO:GO:0007067 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0045177
GO:GO:0005932 GO:GO:0000922 GO:GO:0007019 GO:GO:0070201 CTD:121441
GeneTree:ENSGT00390000001561 HOGENOM:HOG000034642
HOVERGEN:HBG055623 KO:K16547 OMA:FSPIRDD OrthoDB:EOG4NZTSQ
EMBL:D10712 EMBL:AK048393 EMBL:AK085355 EMBL:AK090040 EMBL:AK010591
EMBL:AK153746 EMBL:BC052430 EMBL:BC066870 IPI:IPI00110438
IPI:IPI00656324 PIR:I60167 RefSeq:NP_032708.2 UniGene:Mm.2998
ProteinModelPortal:P33215 SMR:P33215 IntAct:P33215 STRING:P33215
PhosphoSite:P33215 PaxDb:P33215 PRIDE:P33215
Ensembl:ENSMUST00000020163 GeneID:17997 KEGG:mmu:17997
UCSC:uc007gud.2 UCSC:uc007gue.2 InParanoid:P33215 NextBio:292991
Bgee:P33215 Genevestigator:P33215 GermOnline:ENSMUSG00000019988
GO:GO:0000924 Uniprot:P33215
Length = 660
Score = 155 (59.6 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 32/101 (31%), Positives = 62/101 (61%)
Query: 471 VEPGIPPAINGGMSQSLKSPQPDPPQGSNFTLQLFQRTLEETLDSFQKSIHEDMRNLHIE 530
V G+ +++ + +L + +P P S ++ Q ++ETLD F+++ H D+ NL +E
Sbjct: 559 VTAGVASSLSEKIVDTLGNSRPGAPLTS-VQIRFIQNMIQETLDDFREACHRDIVNLQVE 617
Query: 531 ILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 571
+++QFH+Q +M +++ N+ L+ EI+ LR+EN +LR
Sbjct: 618 MIKQFHIQLNEMHSLLERYSVNEG-LVAEIERLREENKRLR 657
Score = 148 (57.2 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 37/133 (27%), Positives = 67/133 (50%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
YN D ++AS SLSG++ILH++ + + ++Q +R + YS + LL + D+G
Sbjct: 127 YNWNDCYIASGSLSGEIILHSVTTNTSSTPFGHGSKQPIRHIKYSLFRKSLLGSVSDNGV 186
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDETTCKAETALL 121
+ LWD +S ++ H AP +GI FS ++ + + + D ++ K L+
Sbjct: 187 VTLWDVNSQSSYHTFDSTHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKKLVKTLV 246
Query: 122 GGAVGDSI-LMPD 133
++ MPD
Sbjct: 247 ADTPLTAVDFMPD 259
Score = 62 (26.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 21/97 (21%), Positives = 44/97 (45%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
++ + L + S SGD I+ + L+ Q +D + S +L + G + T
Sbjct: 42 WSSNNNFLVTASSSGDKIVVSSCKCKPVPLLELAEGQKQTCVDLNSTSMYL-ASGGLNNT 100
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSS 98
+++WD + S LK H ++++ +D ++S
Sbjct: 101 VNIWDLKSKRLHRS-LKDHKCEVTCVAYNWNDCYIAS 136
>UNIPROTKB|F1P0W9 [details] [associations]
symbol:NEDD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000242 "pericentriolar material" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0045177 "apical part of cell" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0045177
GO:GO:0005932 GO:GO:0000242 GO:GO:0000922
GeneTree:ENSGT00390000001561 OMA:FSPIRDD EMBL:AADN02005960
EMBL:AADN02005961 EMBL:AADN02005962 IPI:IPI00592551
Ensembl:ENSGALT00000018716 Uniprot:F1P0W9
Length = 671
Score = 151 (58.2 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 32/101 (31%), Positives = 62/101 (61%)
Query: 471 VEPGIPPAINGGMSQSLKSPQPDPPQGSNFTLQLFQRTLEETLDSFQKSIHEDMRNLHIE 530
V G+ +++ + +++ S + + P S + Q ++ETLD F+++ H D+ NL +E
Sbjct: 570 VTAGVANSLSEKIVETIGSSRLNAPLTS-IQINFIQNMIQETLDDFREACHRDIVNLQVE 628
Query: 531 ILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 571
+++QFHMQ +M ++ N++ L+ EI+ LR+EN +LR
Sbjct: 629 MIKQFHMQLNEMHALLERYSVNES-LVAEIERLREENKRLR 668
Score = 142 (55.0 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 31/89 (34%), Positives = 49/89 (55%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
YN D ++AS SLSG++ILH++ + + + Q +R L YS + LL + D G
Sbjct: 127 YNWNDCYIASGSLSGEIILHSVTTNLSSTPFGYNSSQPIRHLKYSSFKKSLLGSVSDSGN 186
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFS 90
+ LWD ++P ++ H AP + I FS
Sbjct: 187 VTLWDVNTQNPYRNFENTHKAPASEICFS 215
Score = 71 (30.1 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 26/91 (28%), Positives = 43/91 (47%)
Query: 9 LASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD-DGTLHLWDT 67
L S S +GD I+ + +K L + E + S +S L V +G D T+H+WD
Sbjct: 49 LVSASAAGDKIVVSSCK-SKPVPLFEIAEGAKQTC-VSLSSSSLYVASGGLDSTVHIWDL 106
Query: 68 TGRSPKVSWLKQHSAPTAGISFSSDDKAVSS 98
R S LK H ++++ +D ++S
Sbjct: 107 KSRRVHRS-LKDHKDEVTCVAYNWNDCYIAS 136
Score = 66 (28.3 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 21/88 (23%), Positives = 43/88 (48%)
Query: 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHL 64
K L S+S SG++ L ++ + ++ ++ + +S + LLVT G D ++L
Sbjct: 174 KKSLLGSVSDSGNVTLWDVNTQNPYRNFENTHKAPASEICFSPVNELLLVTVGLDKRINL 233
Query: 65 WDTTGRSPKVSWLKQHSAPTAGISFSSD 92
+DT+ + + + H P ++F D
Sbjct: 234 YDTSSKKLLTTIVADH--PLTTVNFMPD 259
Score = 44 (20.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 55 TAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCW 101
++GDD + +WD++ + V H++P VSSLCW
Sbjct: 9 SSGDD--IKIWDSSSLTV-VEQFNPHTSP----------HPVSSLCW 42
>ZFIN|ZDB-GENE-040426-2906 [details] [associations]
symbol:nedd1 "neural precursor cell expressed,
developmentally down-regulated 1" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005813
"centrosome" evidence=IDA] [GO:0071539 "protein localization to
centrosome" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-2906 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071539 GeneTree:ENSGT00390000001561
OMA:FSPIRDD EMBL:CR385081 IPI:IPI00554335
Ensembl:ENSDART00000027740 ArrayExpress:F1QAL1 Bgee:F1QAL1
Uniprot:F1QAL1
Length = 677
Score = 126 (49.4 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 31/90 (34%), Positives = 47/90 (52%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAEL-KDPNEQVLRVLDYSRNSRHLLVTAGDDG 60
+N D ++AS S SGD+ILH++ + + PN + L YS R LL T D G
Sbjct: 127 FNGGDSYIASGSTSGDIILHSITTNLSSKPFGHGPNVPI-HDLRYSLVKRSLLGTVSDSG 185
Query: 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFS 90
++ LWD + + H AP +G++FS
Sbjct: 186 SVALWDANTQKELHLFEGAHKAPCSGLAFS 215
Score = 112 (44.5 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 21/70 (30%), Positives = 44/70 (62%)
Query: 502 LQLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIK 561
+ + + E L+ F+ + H D+ NL +E++RQF++Q ++ ++ N + L++EI+
Sbjct: 606 MNFVRNMIHEALEDFRDTCHRDIINLQVEMVRQFYIQLNEIHGLIEKYSVNDS-LVEEIE 664
Query: 562 SLRKENHQLR 571
L++EN +LR
Sbjct: 665 RLKEENKRLR 674
Score = 85 (35.0 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 31/101 (30%), Positives = 51/101 (50%)
Query: 2 YNCKDEHLASISLSGD-LILHNLASG-AKAAELKDPNEQVLRVLDYSRNSR-HLLVTAGD 58
++ ++++ S S GD L++ +L S EL + +Q RV S NS LV+ G
Sbjct: 42 WSSSNQYVVSASSIGDKLVVSSLKSSPVPVMELGEGKKQT-RV---SLNSTSQFLVSGGL 97
Query: 59 DGTLHLWDT-TGRSPKVSWLKQHSAPTAGISFSSDDKAVSS 98
D T+++WD T R + LK H +SF+ D ++S
Sbjct: 98 DNTVNIWDLKTKRLHRT--LKDHKEEVTCVSFNGGDSYIAS 136
>UNIPROTKB|G3V4I9 [details] [associations]
symbol:NEDD1 "Protein NEDD1" species:9606 "Homo sapiens"
[GO:0000242 "pericentriolar material" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0045177
"apical part of cell" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0045177
GO:GO:0005932 GO:GO:0000242 GO:GO:0000922 EMBL:AC007564
EMBL:AC013417 HGNC:HGNC:7723 ProteinModelPortal:G3V4I9 SMR:G3V4I9
Ensembl:ENST00000553609 ArrayExpress:G3V4I9 Bgee:G3V4I9
Uniprot:G3V4I9
Length = 160
Score = 153 (58.9 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 33/89 (37%), Positives = 51/89 (57%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
YN D ++AS SLSG++ILH++ + + + Q +R L YS + LL + D+G
Sbjct: 38 YNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLLGSVSDNGI 97
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFS 90
+ LWD +SP ++ H AP +GI FS
Sbjct: 98 VTLWDVNSQSPYHNFDSVHKAPASGICFS 126
>UNIPROTKB|F1SQR9 [details] [associations]
symbol:NEDD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045177 "apical part of cell" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0000242
"pericentriolar material" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0045177
GO:GO:0005932 GO:GO:0000242 GO:GO:0000922
GeneTree:ENSGT00390000001561 EMBL:CU896549
Ensembl:ENSSSCT00000000974 OMA:XPKIASS Uniprot:F1SQR9
Length = 390
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 40/133 (30%), Positives = 67/133 (50%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
YN D ++AS SLSG++ILH++ + + + Q +R L YS + LL + D+G
Sbjct: 127 YNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLLGSVSDNGI 186
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDETTCKAETALL 121
+ LWD +SP S+ H AP + I FS ++ + + + D ++ K L+
Sbjct: 187 VTLWDVNSQSPYHSFDSAHKAPASAIGFSPVNELLFVTIGLDKRIILYDTSSKKIVKTLV 246
Query: 122 GGAVGDSI-LMPD 133
A ++ MPD
Sbjct: 247 ADAPLTAVDFMPD 259
>DICTYBASE|DDB_G0282793 [details] [associations]
symbol:wdr61 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000047
GenomeReviews:CM000152_GR eggNOG:COG2319 HSSP:P16649
RefSeq:XP_640180.1 ProteinModelPortal:Q54S59
EnsemblProtists:DDB0267163 GeneID:8623719 KEGG:ddi:DDB_G0282793
OMA:CIWDIKT ProtClustDB:CLSZ2430473 Uniprot:Q54S59
Length = 299
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/90 (35%), Positives = 54/90 (60%)
Query: 8 HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT 67
+L S+S SG++ ++++ +G K + + N+QVL + S N+ + V AG DGT+ +D
Sbjct: 112 NLVSVSESGNISIYSVETGEKLRSISNTNKQVL-TMAISPNNEQIAV-AGLDGTVLCYDV 169
Query: 68 -TGRSPKVSWLKQHSAPTAGISFSSDDKAV 96
+GR +VS +K H P + FSSD K +
Sbjct: 170 ESGR--RVSEIKAHGVPIRSLCFSSDSKTI 197
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.129 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 574 490 0.00082 119 3 11 23 0.46 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 618 (66 KB)
Total size of DFA: 279 KB (2146 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.74u 0.09s 42.83t Elapsed: 00:00:02
Total cpu time: 42.74u 0.09s 42.83t Elapsed: 00:00:02
Start: Tue May 21 10:19:20 2013 End: Tue May 21 10:19:22 2013