Query 008196
Match_columns 574
No_of_seqs 258 out of 1956
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 20:26:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008196.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008196hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 99.7 4.8E-16 1.7E-20 154.2 13.4 100 2-104 21-120 (304)
2 2ynn_A Coatomer subunit beta'; 99.6 3.9E-14 1.3E-18 140.5 16.4 106 2-111 63-169 (304)
3 4gqb_B Methylosome protein 50; 99.6 2.8E-14 9.7E-19 146.1 14.6 105 2-111 222-328 (344)
4 3ow8_A WD repeat-containing pr 99.6 9.8E-14 3.4E-18 139.7 18.2 105 2-111 172-276 (321)
5 1vyh_C Platelet-activating fac 99.5 4.4E-14 1.5E-18 146.7 14.7 105 2-111 158-262 (410)
6 3ow8_A WD repeat-containing pr 99.5 7.4E-14 2.5E-18 140.6 15.7 105 2-111 214-318 (321)
7 2ymu_A WD-40 repeat protein; u 99.5 6.9E-14 2.4E-18 148.2 15.0 97 2-103 24-120 (577)
8 1vyh_C Platelet-activating fac 99.5 1.6E-13 5.4E-18 142.5 17.0 99 2-103 116-214 (410)
9 4g56_B MGC81050 protein; prote 99.5 1.3E-13 4.3E-18 140.9 14.7 105 2-111 234-340 (357)
10 3fm0_A Protein CIAO1; WDR39,SG 99.5 2.7E-13 9.3E-18 137.0 16.5 106 2-111 24-133 (345)
11 2hes_X YDR267CP; beta-propelle 99.5 4.3E-13 1.5E-17 134.7 17.5 103 2-106 66-178 (330)
12 4ery_A WD repeat-containing pr 99.5 1.3E-12 4.4E-17 128.3 19.5 105 2-111 31-135 (312)
13 2pm7_B Protein transport prote 99.5 6.9E-13 2.4E-17 131.0 17.1 101 2-104 17-124 (297)
14 1nr0_A Actin interacting prote 99.5 3.9E-13 1.3E-17 146.9 16.8 107 2-111 26-135 (611)
15 4h5i_A Guanine nucleotide-exch 99.5 1.5E-13 5E-18 141.0 12.3 104 2-107 227-338 (365)
16 3fm0_A Protein CIAO1; WDR39,SG 99.5 7.5E-13 2.6E-17 133.8 17.2 103 2-106 69-175 (345)
17 2ymu_A WD-40 repeat protein; u 99.5 2.5E-13 8.6E-18 143.9 14.3 102 2-110 475-576 (577)
18 4ery_A WD repeat-containing pr 99.5 1.7E-12 5.9E-17 127.4 19.1 105 2-111 73-177 (312)
19 4gqb_B Methylosome protein 50; 99.5 9.8E-13 3.4E-17 134.7 17.9 107 2-111 135-243 (344)
20 1got_B GT-beta; complex (GTP-b 99.5 5.7E-13 2E-17 134.1 15.3 100 2-104 234-335 (340)
21 3lrv_A PRE-mRNA-splicing facto 99.5 7.5E-13 2.6E-17 132.9 15.7 106 2-111 133-241 (343)
22 1got_B GT-beta; complex (GTP-b 99.5 1.6E-12 5.6E-17 130.8 17.7 105 2-111 192-298 (340)
23 2xzm_R RACK1; ribosome, transl 99.4 7E-13 2.4E-17 133.4 14.9 104 3-111 35-146 (343)
24 2pbi_B Guanine nucleotide-bind 99.4 1.2E-12 4.2E-17 133.2 16.0 106 2-111 162-268 (354)
25 3bg1_A Protein SEC13 homolog; 99.4 3.3E-13 1.1E-17 134.8 11.5 101 2-104 21-128 (316)
26 3frx_A Guanine nucleotide-bind 99.4 3.9E-12 1.3E-16 127.1 19.3 98 2-103 73-176 (319)
27 3iz6_a 40S ribosomal protein R 99.4 6.1E-13 2.1E-17 136.2 13.5 106 2-111 257-372 (380)
28 2aq5_A Coronin-1A; WD40 repeat 99.4 2.4E-12 8E-17 131.6 17.7 106 2-111 89-204 (402)
29 3frx_A Guanine nucleotide-bind 99.4 2E-12 6.8E-17 129.3 16.6 105 2-111 25-135 (319)
30 2hes_X YDR267CP; beta-propelle 99.4 1.1E-12 3.9E-17 131.7 14.6 101 2-104 115-222 (330)
31 3dm0_A Maltose-binding peripla 99.4 5.6E-13 1.9E-17 147.2 13.3 105 2-111 390-500 (694)
32 2xzm_R RACK1; ribosome, transl 99.4 3.4E-12 1.2E-16 128.4 17.9 100 2-103 84-194 (343)
33 3vl1_A 26S proteasome regulato 99.4 1.3E-12 4.4E-17 132.5 14.5 105 2-111 105-209 (420)
34 2pbi_B Guanine nucleotide-bind 99.4 1.6E-12 5.6E-17 132.2 15.1 101 2-104 248-349 (354)
35 3f3f_A Nucleoporin SEH1; struc 99.4 1.7E-12 5.9E-17 125.1 14.1 106 2-111 19-140 (351)
36 2pm7_B Protein transport prote 99.4 2.7E-12 9.3E-17 126.7 14.9 103 6-111 170-282 (297)
37 2w18_A PALB2, fancn, partner a 99.4 1.3E-12 4.3E-17 137.5 12.5 101 5-106 192-351 (356)
38 1nr0_A Actin interacting prote 99.4 2.8E-12 9.6E-17 140.1 14.8 99 2-103 155-261 (611)
39 1erj_A Transcriptional repress 99.4 1.4E-11 4.7E-16 126.7 18.1 106 2-111 214-338 (393)
40 3k26_A Polycomb protein EED; W 99.4 5.6E-12 1.9E-16 123.9 14.5 105 2-111 77-189 (366)
41 3dwl_C Actin-related protein 2 99.4 1.3E-12 4.4E-17 130.9 10.0 106 2-111 19-128 (377)
42 1pgu_A Actin interacting prote 99.4 3.8E-12 1.3E-16 134.7 14.0 105 2-111 496-611 (615)
43 1erj_A Transcriptional repress 99.4 7.3E-12 2.5E-16 128.8 15.5 98 2-103 131-229 (393)
44 4e54_B DNA damage-binding prot 99.4 1.4E-12 4.9E-17 135.6 10.3 106 2-111 217-324 (435)
45 3zwl_B Eukaryotic translation 99.4 1.1E-11 3.8E-16 121.6 15.8 97 2-102 40-136 (369)
46 4g56_B MGC81050 protein; prote 99.3 1E-11 3.5E-16 126.7 15.9 107 2-111 147-255 (357)
47 3jrp_A Fusion protein of prote 99.3 7.6E-12 2.6E-16 123.5 14.4 106 2-111 19-131 (379)
48 3dwl_C Actin-related protein 2 99.3 2.3E-12 7.7E-17 129.1 10.5 106 2-111 63-174 (377)
49 3iz6_a 40S ribosomal protein R 99.3 6.6E-12 2.3E-16 128.5 14.1 107 2-111 165-277 (380)
50 3bg1_A Protein SEC13 homolog; 99.3 4.9E-12 1.7E-16 126.2 12.6 103 6-111 179-290 (316)
51 3f3f_A Nucleoporin SEH1; struc 99.3 1.8E-11 6.1E-16 117.9 16.0 111 2-115 118-338 (351)
52 3mmy_A MRNA export factor; mRN 99.3 2E-11 6.8E-16 119.7 16.4 104 2-111 47-157 (368)
53 3vl1_A 26S proteasome regulato 99.3 1E-11 3.5E-16 125.9 13.9 105 2-111 147-275 (420)
54 1gxr_A ESG1, transducin-like e 99.3 5.3E-11 1.8E-15 115.5 18.4 105 2-111 105-211 (337)
55 4aow_A Guanine nucleotide-bind 99.3 1.8E-11 6E-16 119.7 14.9 104 2-111 223-334 (340)
56 2pm9_A Protein WEB1, protein t 99.3 1E-11 3.5E-16 125.1 13.5 107 2-111 75-194 (416)
57 1k8k_C P40, ARP2/3 complex 41 99.3 1E-11 3.4E-16 123.0 13.1 100 2-103 16-118 (372)
58 3mkq_A Coatomer beta'-subunit; 99.3 1.6E-11 5.3E-16 135.7 15.9 98 2-102 21-118 (814)
59 3dm0_A Maltose-binding peripla 99.3 2.2E-11 7.7E-16 134.4 17.0 106 2-111 438-547 (694)
60 3ei3_B DNA damage-binding prot 99.3 1.7E-11 5.8E-16 123.6 14.4 105 2-111 171-279 (383)
61 4gq1_A NUP37; propeller, trans 99.3 3.5E-12 1.2E-16 131.7 9.2 105 2-111 97-215 (393)
62 1sq9_A Antiviral protein SKI8; 99.3 1.8E-11 6.2E-16 122.8 13.7 105 2-111 241-392 (397)
63 4aez_A CDC20, WD repeat-contai 99.3 8.7E-11 3E-15 120.4 18.9 104 2-111 142-245 (401)
64 2pm9_A Protein WEB1, protein t 99.3 5.2E-11 1.8E-15 120.0 16.7 108 2-111 173-291 (416)
65 3vu4_A KMHSV2; beta-propeller 99.3 1.8E-11 6.1E-16 124.6 13.3 99 2-102 203-326 (355)
66 3i2n_A WD repeat-containing pr 99.3 6.5E-12 2.2E-16 123.3 9.7 107 2-111 217-350 (357)
67 4e54_B DNA damage-binding prot 99.3 1E-11 3.5E-16 129.1 11.5 107 2-111 127-237 (435)
68 1gxr_A ESG1, transducin-like e 99.3 1.3E-10 4.6E-15 112.7 18.6 104 2-111 149-252 (337)
69 2xyi_A Probable histone-bindin 99.3 3.7E-11 1.3E-15 125.0 15.4 107 2-111 239-350 (430)
70 3vu4_A KMHSV2; beta-propeller 99.3 2.4E-11 8.3E-16 123.6 13.7 100 7-111 148-268 (355)
71 2j04_A TAU60, YPL007P, hypothe 99.3 1.7E-11 5.7E-16 136.3 13.3 103 1-111 92-208 (588)
72 3ei3_B DNA damage-binding prot 99.3 1E-10 3.4E-15 117.9 17.7 98 2-102 81-184 (383)
73 4a11_B DNA excision repair pro 99.3 5.3E-11 1.8E-15 118.7 15.4 106 3-111 153-273 (408)
74 3lrv_A PRE-mRNA-splicing facto 99.3 2.1E-11 7.3E-16 122.3 12.5 97 2-101 178-280 (343)
75 1r5m_A SIR4-interacting protei 99.3 1.2E-10 4.1E-15 116.5 17.0 104 2-111 53-177 (425)
76 1sq9_A Antiviral protein SKI8; 99.3 1.1E-10 3.7E-15 117.1 16.7 104 2-111 194-319 (397)
77 4aow_A Guanine nucleotide-bind 99.2 2.1E-10 7.1E-15 112.0 18.0 105 2-111 46-156 (340)
78 2oaj_A Protein SNI1; WD40 repe 99.2 1.4E-11 4.8E-16 142.4 11.2 98 2-102 443-595 (902)
79 4ggc_A P55CDC, cell division c 99.2 1.5E-10 5.1E-15 112.0 16.7 95 2-103 33-129 (318)
80 3dw8_B Serine/threonine-protei 99.2 2.3E-11 7.8E-16 124.1 11.4 106 2-111 36-204 (447)
81 1k8k_C P40, ARP2/3 complex 41 99.2 6.6E-11 2.2E-15 117.1 14.3 104 2-111 150-271 (372)
82 4h5i_A Guanine nucleotide-exch 99.2 3.1E-11 1.1E-15 123.7 12.3 103 2-107 141-245 (365)
83 3mkq_A Coatomer beta'-subunit; 99.2 5.2E-11 1.8E-15 131.5 14.9 99 2-102 63-162 (814)
84 2vdu_B TRNA (guanine-N(7)-)-me 99.2 6.8E-11 2.3E-15 123.3 14.9 105 2-111 157-268 (450)
85 3sfz_A APAF-1, apoptotic pepti 99.2 1.3E-10 4.3E-15 135.5 18.7 98 2-102 623-722 (1249)
86 4aez_A CDC20, WD repeat-contai 99.2 8.3E-11 2.8E-15 120.5 15.2 107 2-111 225-333 (401)
87 2j04_B YDR362CP, TAU91; beta p 99.2 4.9E-12 1.7E-16 138.2 6.4 105 2-111 318-425 (524)
88 1r5m_A SIR4-interacting protei 99.2 7.6E-11 2.6E-15 117.9 14.5 104 2-111 255-358 (425)
89 3odt_A Protein DOA1; ubiquitin 99.2 8.5E-11 2.9E-15 113.2 13.9 102 2-111 192-293 (313)
90 2oaj_A Protein SNI1; WD40 repe 99.2 2.2E-11 7.4E-16 140.8 11.5 105 2-111 496-658 (902)
91 4gq1_A NUP37; propeller, trans 99.2 1.5E-11 5.2E-16 126.9 9.2 98 5-103 155-277 (393)
92 3dw8_B Serine/threonine-protei 99.2 7.2E-11 2.5E-15 120.4 14.0 105 2-111 185-312 (447)
93 3v7d_B Cell division control p 99.2 1.5E-10 5.2E-15 119.7 16.5 103 3-111 129-233 (464)
94 3jrp_A Fusion protein of prote 99.2 1E-10 3.6E-15 115.4 14.6 106 2-111 63-188 (379)
95 2aq5_A Coronin-1A; WD40 repeat 99.2 8.5E-11 2.9E-15 120.0 14.4 107 2-111 139-251 (402)
96 2oit_A Nucleoporin 214KDA; NH2 99.2 8.8E-12 3E-16 132.1 7.2 106 2-111 100-220 (434)
97 2xyi_A Probable histone-bindin 99.2 7.4E-11 2.5E-15 122.7 13.8 107 2-111 285-407 (430)
98 1pgu_A Actin interacting prote 99.2 1.8E-10 6E-15 121.9 16.3 99 2-103 26-138 (615)
99 4a11_B DNA excision repair pro 99.2 1.9E-10 6.5E-15 114.7 15.5 106 2-111 194-362 (408)
100 3zwl_B Eukaryotic translation 99.2 2.1E-10 7.1E-15 112.5 15.4 104 2-111 226-343 (369)
101 1yfq_A Cell cycle arrest prote 99.2 7.5E-11 2.6E-15 115.6 12.1 104 2-111 19-128 (342)
102 4gga_A P55CDC, cell division c 99.2 2.7E-10 9.3E-15 117.6 16.8 95 2-103 113-209 (420)
103 3gre_A Serine/threonine-protei 99.2 6.8E-11 2.3E-15 121.3 11.9 105 2-111 178-289 (437)
104 2j04_B YDR362CP, TAU91; beta p 99.2 1E-10 3.4E-15 127.8 13.8 96 6-104 225-334 (524)
105 1yfq_A Cell cycle arrest prote 99.2 1.3E-10 4.6E-15 113.8 12.9 98 2-104 201-315 (342)
106 3i2n_A WD repeat-containing pr 99.2 2.8E-10 9.7E-15 111.6 15.0 106 2-111 73-196 (357)
107 3sfz_A APAF-1, apoptotic pepti 99.2 2.2E-10 7.6E-15 133.4 15.8 100 2-103 665-765 (1249)
108 3jro_A Fusion protein of prote 99.1 2.1E-10 7.2E-15 129.1 14.2 107 1-111 16-129 (753)
109 4gga_A P55CDC, cell division c 99.1 4.1E-10 1.4E-14 116.3 15.1 98 2-103 155-252 (420)
110 3mmy_A MRNA export factor; mRN 99.1 1.4E-10 4.9E-15 113.6 11.0 93 9-103 231-337 (368)
111 3v7d_B Cell division control p 99.1 6.2E-10 2.1E-14 115.1 16.3 102 3-111 277-378 (464)
112 2j04_A TAU60, YPL007P, hypothe 99.1 2.9E-10 1E-14 126.3 14.3 103 2-113 137-253 (588)
113 2vdu_B TRNA (guanine-N(7)-)-me 99.1 4.9E-10 1.7E-14 116.8 15.1 106 2-111 110-226 (450)
114 3odt_A Protein DOA1; ubiquitin 99.1 3.1E-10 1E-14 109.3 12.2 96 2-102 26-123 (313)
115 3k26_A Polycomb protein EED; W 99.1 1.5E-09 5.2E-14 106.4 16.2 106 2-111 26-144 (366)
116 4ggc_A P55CDC, cell division c 99.1 1.3E-09 4.4E-14 105.4 14.4 104 2-111 75-178 (318)
117 1p22_A F-BOX/WD-repeat protein 99.1 3.9E-09 1.3E-13 109.3 18.0 101 2-111 139-239 (435)
118 3gre_A Serine/threonine-protei 99.1 2.6E-09 8.8E-14 109.6 16.2 105 2-111 119-242 (437)
119 2ovr_B FBW7, F-BOX/WD repeat p 99.0 3.8E-09 1.3E-13 109.2 16.8 101 2-111 125-225 (445)
120 2hqs_A Protein TOLB; TOLB, PAL 99.0 6.5E-09 2.2E-13 108.7 17.6 97 2-102 186-287 (415)
121 1l0q_A Surface layer protein; 99.0 7.8E-09 2.7E-13 103.9 16.7 105 2-111 39-144 (391)
122 3bws_A Protein LP49; two-domai 99.0 4.2E-09 1.4E-13 107.3 14.7 98 2-102 177-274 (433)
123 3jro_A Fusion protein of prote 99.0 2.5E-09 8.7E-14 120.3 13.5 106 2-111 61-186 (753)
124 2ovr_B FBW7, F-BOX/WD repeat p 99.0 4E-09 1.4E-13 109.0 13.4 97 3-104 326-430 (445)
125 1l0q_A Surface layer protein; 99.0 1.2E-08 4.2E-13 102.4 16.5 106 2-111 123-230 (391)
126 1p22_A F-BOX/WD-repeat protein 99.0 1.7E-08 5.7E-13 104.5 17.8 100 4-111 181-282 (435)
127 3bws_A Protein LP49; two-domai 98.9 6E-09 2.1E-13 106.2 13.7 97 2-101 130-231 (433)
128 2oit_A Nucleoporin 214KDA; NH2 98.9 3.4E-09 1.2E-13 112.2 12.1 95 2-100 157-259 (434)
129 2w18_A PALB2, fancn, partner a 98.9 1.7E-08 5.7E-13 106.3 14.0 84 14-100 155-245 (356)
130 2ojh_A Uncharacterized protein 98.8 3.3E-08 1.1E-12 93.2 14.2 101 2-103 136-238 (297)
131 2ojh_A Uncharacterized protein 98.8 6.6E-08 2.2E-12 91.1 13.1 97 2-103 49-151 (297)
132 2hqs_A Protein TOLB; TOLB, PAL 98.7 1.8E-07 6.1E-12 97.7 16.1 106 2-111 230-341 (415)
133 2ecf_A Dipeptidyl peptidase IV 98.7 1E-07 3.5E-12 104.9 14.7 97 2-100 44-170 (741)
134 3u4y_A Uncharacterized protein 98.7 2.2E-07 7.4E-12 91.1 15.0 98 1-100 4-102 (331)
135 3u4y_A Uncharacterized protein 98.6 1.1E-06 3.9E-11 85.9 17.7 107 2-111 91-204 (331)
136 1nir_A Nitrite reductase; hemo 98.6 2.2E-07 7.4E-12 101.5 13.7 104 2-110 145-254 (543)
137 3vgz_A Uncharacterized protein 98.6 8.1E-07 2.8E-11 87.2 16.1 106 2-111 148-259 (353)
138 1xfd_A DIP, dipeptidyl aminope 98.6 7.7E-08 2.6E-12 105.4 9.6 105 1-111 23-140 (723)
139 1k32_A Tricorn protease; prote 98.6 2E-07 6.8E-12 108.4 13.6 98 2-103 386-493 (1045)
140 1jmx_B Amine dehydrogenase; ox 98.6 2.8E-07 9.5E-12 90.1 12.3 99 2-102 7-112 (349)
141 3o4h_A Acylamino-acid-releasin 98.5 8E-08 2.8E-12 103.4 7.7 97 2-103 157-267 (582)
142 3scy_A Hypothetical bacterial 98.5 8.2E-07 2.8E-11 88.9 14.0 100 1-102 217-326 (361)
143 3vgz_A Uncharacterized protein 98.5 1.8E-06 6.1E-11 84.7 16.1 107 2-111 48-170 (353)
144 1ri6_A Putative isomerase YBHE 98.5 4.8E-07 1.6E-11 88.0 10.7 96 2-100 45-147 (343)
145 1pby_B Quinohemoprotein amine 98.5 1.6E-06 5.6E-11 84.0 14.5 93 7-100 2-100 (337)
146 4a5s_A Dipeptidyl peptidase 4 98.5 6.6E-07 2.3E-11 100.0 13.2 103 1-111 23-138 (740)
147 3hfq_A Uncharacterized protein 98.5 2.2E-06 7.5E-11 85.1 14.8 102 2-103 194-307 (347)
148 1ri6_A Putative isomerase YBHE 98.5 9.5E-07 3.3E-11 85.9 11.7 107 2-111 91-206 (343)
149 1xfd_A DIP, dipeptidyl aminope 98.4 5.3E-07 1.8E-11 98.7 10.6 99 2-105 68-196 (723)
150 1k32_A Tricorn protease; prote 98.4 1.3E-06 4.4E-11 101.5 14.4 98 1-103 344-442 (1045)
151 1nir_A Nitrite reductase; hemo 98.4 1.4E-06 4.8E-11 95.1 13.7 109 2-110 229-352 (543)
152 1z68_A Fibroblast activation p 98.4 7E-07 2.4E-11 98.2 10.9 97 2-104 67-191 (719)
153 3hfq_A Uncharacterized protein 98.4 3.5E-06 1.2E-10 83.6 14.5 100 2-101 148-259 (347)
154 1z68_A Fibroblast activation p 98.4 9E-07 3.1E-11 97.4 10.6 101 2-111 23-136 (719)
155 3scy_A Hypothetical bacterial 98.4 5.9E-06 2E-10 82.6 15.3 110 2-111 162-288 (361)
156 1jof_A Carboxy-CIS,CIS-muconat 98.3 8.4E-06 2.9E-10 82.7 14.3 102 1-102 89-213 (365)
157 2z3z_A Dipeptidyl aminopeptida 98.3 9.2E-06 3.1E-10 89.0 15.7 107 2-111 317-432 (706)
158 4a5s_A Dipeptidyl peptidase 4 98.3 3.4E-06 1.1E-10 94.3 12.4 101 2-106 69-195 (740)
159 1pby_B Quinohemoprotein amine 98.3 7.1E-06 2.4E-10 79.5 13.0 94 2-99 41-152 (337)
160 2z3z_A Dipeptidyl aminopeptida 98.3 3.8E-06 1.3E-10 92.0 12.2 101 2-103 265-377 (706)
161 2ecf_A Dipeptidyl peptidase IV 98.2 6.6E-06 2.2E-10 90.5 13.6 100 2-103 344-446 (741)
162 3o4h_A Acylamino-acid-releasin 98.2 1.8E-06 6.1E-11 92.9 8.2 94 1-104 201-304 (582)
163 1jof_A Carboxy-CIS,CIS-muconat 98.2 2.5E-06 8.7E-11 86.5 8.3 98 2-101 47-164 (365)
164 3azo_A Aminopeptidase; POP fam 98.2 5.1E-06 1.7E-10 90.3 11.2 107 2-111 137-271 (662)
165 1jmx_B Amine dehydrogenase; ox 98.2 7.3E-06 2.5E-10 80.0 10.4 95 2-99 50-164 (349)
166 2xdw_A Prolyl endopeptidase; a 98.1 1.1E-05 3.8E-10 89.5 12.1 99 2-103 132-254 (710)
167 2bkl_A Prolyl endopeptidase; m 98.1 1.6E-05 5.4E-10 88.3 13.2 98 2-103 128-248 (695)
168 3pe7_A Oligogalacturonate lyas 98.1 4.3E-05 1.5E-09 76.4 14.2 96 1-99 42-142 (388)
169 3pe7_A Oligogalacturonate lyas 98.0 5.5E-05 1.9E-09 75.6 14.2 96 2-101 88-208 (388)
170 2oiz_A Aromatic amine dehydrog 98.0 3.5E-05 1.2E-09 79.1 11.7 88 2-94 261-360 (361)
171 2dg1_A DRP35, lactonase; beta 97.9 0.00023 7.8E-09 70.0 16.4 96 2-100 52-153 (333)
172 1q7f_A NHL, brain tumor CG1071 97.9 8.5E-05 2.9E-09 71.7 12.6 102 2-111 171-277 (286)
173 2gop_A Trilobed protease; beta 97.9 4E-05 1.4E-09 75.6 10.3 95 1-102 65-190 (347)
174 3azo_A Aminopeptidase; POP fam 97.9 5.5E-05 1.9E-09 82.1 12.2 96 2-101 195-313 (662)
175 3fvz_A Peptidyl-glycine alpha- 97.9 0.00018 6.1E-09 72.1 14.6 97 2-100 31-162 (329)
176 3no2_A Uncharacterized protein 97.8 0.00019 6.3E-09 71.3 13.1 93 4-101 3-96 (276)
177 1q7f_A NHL, brain tumor CG1071 97.8 0.00021 7.3E-09 68.8 13.0 94 2-100 128-225 (286)
178 1xip_A Nucleoporin NUP159; bet 97.7 0.00013 4.3E-09 77.4 10.3 88 5-104 96-183 (388)
179 3c5m_A Oligogalacturonate lyas 97.7 0.00018 6.2E-09 71.5 10.7 94 2-102 245-371 (396)
180 2oiz_A Aromatic amine dehydrog 97.7 0.00019 6.5E-09 73.6 11.0 102 4-109 13-135 (361)
181 3c5m_A Oligogalacturonate lyas 97.6 6.7E-05 2.3E-09 74.7 7.1 96 2-100 88-207 (396)
182 1qks_A Cytochrome CD1 nitrite 97.6 0.00068 2.3E-08 74.9 14.7 69 1-71 203-277 (567)
183 1yr2_A Prolyl oligopeptidase; 97.6 0.00036 1.2E-08 78.1 12.6 98 2-103 170-289 (741)
184 3e5z_A Putative gluconolactona 97.6 0.00049 1.7E-08 66.9 11.8 92 2-100 179-275 (296)
185 3e5z_A Putative gluconolactona 97.5 0.00033 1.1E-08 68.1 10.1 93 1-98 34-131 (296)
186 1qks_A Cytochrome CD1 nitrite 97.5 0.0011 3.7E-08 73.3 14.7 101 6-111 167-273 (567)
187 1xip_A Nucleoporin NUP159; bet 97.5 0.00028 9.6E-09 74.8 9.3 84 9-100 139-232 (388)
188 3fvz_A Peptidyl-glycine alpha- 97.4 0.0014 4.9E-08 65.4 13.8 95 2-100 203-310 (329)
189 1rwi_B Serine/threonine-protei 97.4 0.001 3.4E-08 63.1 11.8 96 2-100 157-252 (270)
190 3no2_A Uncharacterized protein 97.3 0.0032 1.1E-07 62.4 14.4 102 2-109 44-159 (276)
191 2xdw_A Prolyl endopeptidase; a 97.3 0.0021 7.2E-08 71.3 14.1 98 2-101 178-305 (710)
192 2bkl_A Prolyl endopeptidase; m 97.2 0.0054 1.8E-07 67.9 16.0 106 2-111 175-301 (695)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 97.1 0.0038 1.3E-07 60.3 12.4 94 4-100 185-286 (314)
194 3sjl_D Methylamine dehydrogena 97.1 0.0037 1.3E-07 66.2 13.3 99 1-102 39-157 (386)
195 3dsm_A Uncharacterized protein 97.1 0.0025 8.4E-08 64.0 11.4 96 2-100 179-285 (328)
196 2gop_A Trilobed protease; beta 97.1 0.0036 1.2E-07 61.5 12.3 91 3-103 223-321 (347)
197 2dg1_A DRP35, lactonase; beta 97.1 0.00065 2.2E-08 66.8 6.9 93 2-100 13-105 (333)
198 3iuj_A Prolyl endopeptidase; h 97.1 0.00094 3.2E-08 74.4 9.0 96 2-102 136-254 (693)
199 2mad_H Methylamine dehydrogena 97.1 0.013 4.3E-07 60.8 16.6 97 2-102 28-145 (373)
200 1rwi_B Serine/threonine-protei 97.0 0.0063 2.1E-07 57.5 12.7 95 2-99 115-209 (270)
201 3g4e_A Regucalcin; six bladed 97.0 0.0045 1.6E-07 60.8 11.9 96 2-100 156-260 (297)
202 2qe8_A Uncharacterized protein 96.8 0.016 5.4E-07 58.4 13.8 101 2-103 74-216 (343)
203 2z2n_A Virginiamycin B lyase; 96.7 0.022 7.4E-07 54.0 13.6 93 2-98 148-241 (299)
204 2ghs_A AGR_C_1268P; regucalcin 96.7 0.022 7.4E-07 57.0 14.2 95 2-100 186-290 (326)
205 3dsm_A Uncharacterized protein 96.7 0.021 7E-07 57.2 13.9 98 6-109 54-156 (328)
206 2z2n_A Virginiamycin B lyase; 96.7 0.024 8.2E-07 53.7 13.5 93 2-98 106-199 (299)
207 2mad_H Methylamine dehydrogena 96.5 0.024 8.3E-07 58.7 13.2 69 1-71 72-158 (373)
208 3c75_H MADH, methylamine dehyd 96.3 0.025 8.5E-07 60.6 12.1 104 4-111 82-207 (426)
209 3sjl_D Methylamine dehydrogena 96.2 0.0089 3.1E-07 63.3 8.4 70 1-71 84-171 (386)
210 2xe4_A Oligopeptidase B; hydro 96.2 0.016 5.5E-07 65.5 10.8 99 2-104 181-293 (751)
211 3dr2_A Exported gluconolactona 96.2 0.013 4.3E-07 57.7 8.8 94 1-98 51-147 (305)
212 2qc5_A Streptogramin B lactona 96.2 0.069 2.4E-06 50.5 13.5 94 2-99 27-121 (300)
213 2qc5_A Streptogramin B lactona 96.1 0.075 2.6E-06 50.3 13.6 94 2-99 153-247 (300)
214 1yr2_A Prolyl oligopeptidase; 96.1 0.041 1.4E-06 61.4 13.6 98 2-102 216-336 (741)
215 3iuj_A Prolyl endopeptidase; h 96.1 0.084 2.9E-06 58.7 15.6 98 2-102 182-300 (693)
216 1mda_H Methylamine dehydrogena 95.9 0.029 9.8E-07 58.8 10.4 97 9-109 35-151 (368)
217 2ece_A 462AA long hypothetical 95.9 0.043 1.5E-06 59.5 12.0 107 2-108 195-347 (462)
218 3g4e_A Regucalcin; six bladed 95.8 0.034 1.2E-06 54.5 9.9 100 2-103 105-219 (297)
219 1mda_H Methylamine dehydrogena 95.7 0.026 8.8E-07 59.1 9.0 86 2-91 271-366 (368)
220 3hrp_A Uncharacterized protein 95.7 0.088 3E-06 55.0 13.1 95 2-99 226-340 (409)
221 1pjx_A Dfpase, DIISOPROPYLFLUO 95.7 0.033 1.1E-06 53.5 9.1 67 2-69 233-299 (314)
222 3hrp_A Uncharacterized protein 95.7 0.11 3.8E-06 54.2 13.5 93 2-99 138-236 (409)
223 3s9g_A Protein hexim1; cyclin 95.6 0.045 1.6E-06 47.2 8.4 25 548-572 62-86 (104)
224 2oxj_A Hybrid alpha/beta pepti 95.5 0.016 5.3E-07 40.6 4.0 29 546-574 3-31 (34)
225 3dr2_A Exported gluconolactona 95.3 0.079 2.7E-06 52.0 10.5 92 2-100 195-295 (305)
226 1yiq_A Quinohemoprotein alcoho 95.3 0.042 1.4E-06 61.7 9.1 81 15-98 454-534 (689)
227 2qe8_A Uncharacterized protein 95.0 0.035 1.2E-06 55.8 6.8 95 2-100 202-309 (343)
228 2ghs_A AGR_C_1268P; regucalcin 94.9 0.24 8.4E-06 49.3 12.6 93 2-98 141-246 (326)
229 3c75_H MADH, methylamine dehyd 94.8 0.31 1.1E-05 52.0 13.8 107 2-111 272-400 (426)
230 3m48_A General control protein 94.7 0.032 1.1E-06 38.9 3.8 29 546-574 2-30 (33)
231 1npe_A Nidogen, entactin; glyc 94.6 0.92 3.1E-05 43.2 15.5 99 2-102 43-142 (267)
232 1kb0_A Quinohemoprotein alcoho 94.5 0.084 2.9E-06 59.1 9.1 81 16-99 457-537 (677)
233 2hz6_A Endoplasmic reticulum t 94.4 0.035 1.2E-06 57.0 5.3 63 5-71 8-70 (369)
234 1fwx_A Nitrous oxide reductase 94.3 0.03 1E-06 62.6 4.7 96 2-100 284-406 (595)
235 2ece_A 462AA long hypothetical 94.2 0.17 5.9E-06 54.8 10.3 100 1-100 259-399 (462)
236 1fwx_A Nitrous oxide reductase 94.2 0.21 7.2E-06 55.8 11.2 83 17-103 255-351 (595)
237 3mq7_A Bone marrow stromal ant 93.9 0.64 2.2E-05 41.3 11.4 69 503-571 28-105 (121)
238 1t2k_D Cyclic-AMP-dependent tr 93.5 0.11 3.7E-06 40.9 5.3 36 539-574 24-59 (61)
239 1gu4_A CAAT/enhancer binding p 93.3 0.16 5.3E-06 42.4 6.2 53 522-574 20-73 (78)
240 1npe_A Nidogen, entactin; glyc 93.2 2.2 7.5E-05 40.6 15.2 98 2-102 86-187 (267)
241 1ci6_A Transcription factor AT 93.1 0.15 5.1E-06 40.6 5.6 35 540-574 26-60 (63)
242 3c3g_A Alpha/beta peptide with 92.9 0.12 4E-06 36.0 4.0 29 546-574 2-30 (33)
243 1hjb_A Ccaat/enhancer binding 92.9 0.15 5.3E-06 43.2 5.6 36 539-574 38-73 (87)
244 3c3f_A Alpha/beta peptide with 92.5 0.14 4.9E-06 35.8 4.0 29 546-574 3-31 (34)
245 2wuj_A Septum site-determining 92.4 0.15 5.1E-06 39.8 4.5 36 539-574 22-57 (57)
246 2iwa_A Glutamine cyclotransfer 92.3 2.8 9.7E-05 41.8 15.1 94 2-100 28-123 (266)
247 2xe4_A Oligopeptidase B; hydro 92.2 1.1 3.9E-05 50.3 13.4 98 1-99 227-336 (751)
248 1jnm_A Proto-oncogene C-JUN; B 92.0 0.15 5.1E-06 40.3 4.2 35 540-574 25-59 (62)
249 3nol_A Glutamine cyclotransfer 91.9 0.84 2.9E-05 45.9 10.6 91 2-99 50-142 (262)
250 2iwa_A Glutamine cyclotransfer 91.8 1.5 5.2E-05 43.8 12.5 100 5-111 74-179 (266)
251 3s9g_A Protein hexim1; cyclin 91.4 1.7 5.8E-05 37.5 10.3 35 539-573 60-94 (104)
252 1uo4_A General control protein 91.2 0.24 8.1E-06 34.8 3.9 29 546-574 3-31 (34)
253 2bni_A General control protein 91.1 0.25 8.6E-06 34.6 4.0 29 546-574 3-31 (34)
254 3nok_A Glutaminyl cyclase; bet 91.0 1.3 4.5E-05 44.7 11.0 97 8-111 108-208 (268)
255 2hz6_A Endoplasmic reticulum t 91.0 0.18 6.1E-06 51.6 4.8 87 3-95 127-217 (369)
256 3i00_A HIP-I, huntingtin-inter 90.9 2.2 7.7E-05 38.1 11.2 55 519-573 26-83 (120)
257 2oqq_A Transcription factor HY 90.9 0.4 1.4E-05 35.2 5.0 34 541-574 7-40 (42)
258 3mbr_X Glutamine cyclotransfer 90.2 2.5 8.5E-05 41.9 12.0 99 6-111 74-177 (243)
259 3hxj_A Pyrrolo-quinoline quino 90.0 3.1 0.00011 39.9 12.4 87 6-98 107-193 (330)
260 2ad6_A Methanol dehydrogenase 90.0 1 3.5E-05 49.3 9.9 83 15-100 443-525 (571)
261 2wt7_A Proto-oncogene protein 89.9 0.48 1.6E-05 37.5 5.3 35 540-574 26-60 (63)
262 3nol_A Glutamine cyclotransfer 89.8 2 6.8E-05 43.2 11.1 100 5-111 95-199 (262)
263 1x79_B RAB GTPase binding effe 89.5 1.1 3.8E-05 39.7 7.8 67 505-571 28-104 (112)
264 3qqz_A Putative uncharacterize 89.5 8 0.00027 38.3 15.2 96 2-100 34-139 (255)
265 3q4f_C DNA repair protein XRCC 89.5 0.39 1.3E-05 45.7 5.2 31 542-572 152-182 (186)
266 2jee_A YIIU; FTSZ, septum, coi 89.5 0.86 3E-05 38.2 6.7 24 549-572 32-62 (81)
267 3w03_C DNA repair protein XRCC 89.2 0.42 1.4E-05 45.9 5.2 29 544-572 145-173 (184)
268 2p4o_A Hypothetical protein; p 89.1 0.97 3.3E-05 44.4 8.1 97 3-102 175-278 (306)
269 2dgc_A Protein (GCN4); basic d 88.9 0.46 1.6E-05 37.8 4.5 41 531-574 20-60 (63)
270 1dh3_A Transcription factor CR 88.6 0.54 1.8E-05 36.4 4.6 29 546-574 24-52 (55)
271 1ijq_A LDL receptor, low-densi 88.5 13 0.00046 36.7 16.2 100 2-103 37-141 (316)
272 3hxj_A Pyrrolo-quinoline quino 88.5 3.2 0.00011 39.8 11.2 85 5-98 147-231 (330)
273 3oja_A Leucine-rich immune mol 87.9 1.3 4.5E-05 47.2 8.8 33 541-573 425-457 (487)
274 3v65_B Low-density lipoprotein 87.8 10 0.00035 38.9 15.2 100 2-103 123-223 (386)
275 3mbr_X Glutamine cyclotransfer 87.7 12 0.00041 37.0 14.9 88 6-99 31-120 (243)
276 1k3i_A Galactose oxidase precu 87.6 1.5 5E-05 48.3 9.2 96 5-102 197-308 (656)
277 1flg_A Protein (quinoprotein e 87.6 1.2 4E-05 49.1 8.3 81 15-98 465-545 (582)
278 3v64_C Agrin; beta propeller, 87.5 14 0.00046 37.4 15.7 100 2-103 80-180 (349)
279 1yiq_A Quinohemoprotein alcoho 87.5 0.64 2.2E-05 52.1 6.3 55 4-58 484-538 (689)
280 1wt6_A Myotonin-protein kinase 87.4 4.4 0.00015 33.8 9.6 29 544-572 45-73 (81)
281 2wq1_A General control protein 87.4 0.71 2.4E-05 32.1 4.0 29 546-574 2-30 (33)
282 2fp8_A Strictosidine synthase; 87.1 4.2 0.00014 39.8 11.3 81 16-99 165-246 (322)
283 3pbp_A Nucleoporin NUP82; beta 86.9 5.3 0.00018 43.1 12.6 96 2-100 73-198 (452)
284 1t6f_A Geminin; coiled-coil, c 86.8 0.89 3.1E-05 32.3 4.3 20 554-573 17-36 (37)
285 3tc9_A Hypothetical hydrolase; 86.5 4.1 0.00014 42.7 11.4 96 2-101 186-289 (430)
286 3nok_A Glutaminyl cyclase; bet 86.4 4.9 0.00017 40.5 11.4 94 4-100 143-253 (268)
287 1kd8_B GABH BLL, GCN4 acid bas 86.4 0.85 2.9E-05 32.4 4.0 28 546-573 3-30 (36)
288 2p4o_A Hypothetical protein; p 86.3 9.4 0.00032 37.2 13.4 64 2-69 39-104 (306)
289 1k3i_A Galactose oxidase precu 86.2 0.91 3.1E-05 50.0 6.5 96 5-101 410-530 (656)
290 1ez3_A Syntaxin-1A; three heli 86.1 3.4 0.00012 36.0 9.0 61 509-570 17-80 (127)
291 2r2v_A GCN4 leucine zipper; co 86.0 0.92 3.2E-05 31.8 4.0 29 546-574 3-31 (34)
292 1ijq_A LDL receptor, low-densi 85.9 27 0.00094 34.4 16.7 93 6-100 89-182 (316)
293 2ism_A Putative oxidoreductase 85.6 5 0.00017 40.8 11.2 94 2-99 38-152 (352)
294 2fp8_A Strictosidine synthase; 85.1 8.8 0.0003 37.4 12.5 94 2-99 26-144 (322)
295 3lay_A Zinc resistance-associa 85.1 2.9 0.0001 39.6 8.5 56 513-572 76-134 (175)
296 1kb0_A Quinohemoprotein alcoho 85.1 1.4 4.7E-05 49.3 7.3 55 3-57 485-539 (677)
297 3p5b_L Low density lipoprotein 84.8 38 0.0013 34.8 17.8 104 2-107 119-227 (400)
298 3v64_C Agrin; beta propeller, 84.8 17 0.00056 36.7 14.7 95 6-102 128-223 (349)
299 1kv9_A Type II quinohemoprotei 84.7 1.6 5.6E-05 48.5 7.7 81 15-98 437-517 (668)
300 2p22_A Suppressor protein STP2 84.6 4.8 0.00016 38.2 9.7 70 500-570 9-89 (174)
301 2yy0_A C-MYC-binding protein; 84.6 0.95 3.3E-05 34.9 4.0 29 546-574 21-49 (53)
302 3tc9_A Hypothetical hydrolase; 84.6 11 0.00038 39.4 13.7 97 2-101 144-245 (430)
303 1deb_A APC protein, adenomatou 84.3 0.6 2E-05 35.6 2.6 22 553-574 5-26 (54)
304 1go4_E MAD1 (mitotic arrest de 84.0 0.84 2.9E-05 39.7 3.9 23 551-573 12-34 (100)
305 2hy6_A General control protein 83.9 0.92 3.1E-05 31.8 3.2 29 546-574 3-31 (34)
306 1uii_A Geminin; human, DNA rep 83.9 2.3 7.9E-05 35.7 6.3 21 553-573 55-75 (83)
307 3q7m_A Lipoprotein YFGL, BAMB; 83.8 3.1 0.00011 41.4 8.6 63 6-71 277-339 (376)
308 3m0c_C LDL receptor, low-densi 83.8 20 0.00067 41.1 16.2 93 9-103 439-535 (791)
309 1nlw_A MAD protein, MAX dimeri 83.6 0.99 3.4E-05 37.5 4.0 24 550-573 53-76 (80)
310 1nkp_B MAX protein, MYC proto- 83.6 0.98 3.4E-05 37.4 4.0 24 550-573 53-76 (83)
311 1nfn_A Apolipoprotein E3; lipi 83.1 1.5 5E-05 42.0 5.6 69 505-573 89-158 (191)
312 1kd8_A GABH AIV, GCN4 acid bas 82.9 1 3.6E-05 31.9 3.2 27 547-573 4-30 (36)
313 2jn6_A Protein CGL2762, transp 82.7 0.94 3.2E-05 37.6 3.6 20 554-573 62-81 (97)
314 3v65_B Low-density lipoprotein 82.0 26 0.00087 35.9 15.0 93 7-101 172-265 (386)
315 1wlq_A Geminin; coiled-coil; 2 80.8 2.9 0.0001 35.0 5.8 19 554-572 48-66 (83)
316 4hw6_A Hypothetical protein, I 80.7 9 0.00031 40.2 11.1 67 2-68 235-303 (433)
317 3qqz_A Putative uncharacterize 80.1 14 0.00047 36.6 11.6 96 2-98 128-240 (255)
318 1w6s_A Methanol dehydrogenase 80.0 4.9 0.00017 44.5 9.2 82 14-98 451-532 (599)
319 2p9w_A MAL S 1 allergenic prot 79.7 15 0.00051 38.1 12.1 97 3-100 74-203 (334)
320 2p9w_A MAL S 1 allergenic prot 79.7 37 0.0013 35.1 15.1 100 2-102 20-157 (334)
321 2l5g_A GPS2 protein, G protein 79.6 2.3 7.8E-05 30.5 4.0 32 541-572 5-36 (38)
322 3m9b_A Proteasome-associated A 78.7 1.7 5.8E-05 43.5 4.4 25 548-572 72-96 (251)
323 1nkp_A C-MYC, MYC proto-oncoge 78.7 1.8 6.2E-05 36.5 4.0 20 553-572 68-87 (88)
324 4a0p_A LRP6, LRP-6, low-densit 78.4 57 0.002 36.0 17.2 99 2-102 44-143 (628)
325 3p5b_L Low density lipoprotein 78.4 58 0.002 33.4 16.3 93 6-100 171-264 (400)
326 3iv1_A Tumor susceptibility ge 78.1 28 0.00095 28.9 10.8 67 503-574 10-76 (78)
327 3q7m_A Lipoprotein YFGL, BAMB; 77.9 17 0.00059 35.9 11.7 66 5-73 52-126 (376)
328 3sov_A LRP-6, low-density lipo 77.7 26 0.0009 35.0 13.1 91 11-103 52-143 (318)
329 3sov_A LRP-6, low-density lipo 77.6 60 0.002 32.3 15.9 92 6-100 91-184 (318)
330 3lay_A Zinc resistance-associa 77.5 3.1 0.0001 39.5 5.6 33 498-531 69-101 (175)
331 3trt_A Vimentin; cytoskeleton, 77.1 19 0.00067 28.9 9.7 39 533-571 31-69 (77)
332 2w6a_A ARF GTPase-activating p 77.0 8.5 0.00029 30.3 6.9 27 547-573 37-63 (63)
333 1gd2_E Transcription factor PA 76.4 2.1 7.1E-05 34.9 3.6 23 549-571 48-70 (70)
334 3sre_A PON1, serum paraoxonase 76.4 11 0.00038 39.1 10.1 61 41-102 224-287 (355)
335 1nkp_A C-MYC, MYC proto-oncoge 75.9 6 0.00021 33.2 6.5 28 547-574 55-82 (88)
336 3oja_B Anopheles plasmodium-re 75.1 15 0.0005 39.8 11.1 19 552-570 559-577 (597)
337 3das_A Putative oxidoreductase 74.9 23 0.00078 36.6 12.0 98 2-100 39-158 (347)
338 3mq9_A Bone marrow stromal ant 74.9 13 0.00043 39.3 10.3 31 510-540 372-411 (471)
339 1t72_A Phosphate transport sys 74.5 5.6 0.00019 37.6 6.7 57 516-572 5-61 (227)
340 3a9g_A Putative uncharacterize 74.5 14 0.00047 37.6 10.1 93 2-99 36-152 (354)
341 1kv9_A Type II quinohemoprotei 74.4 18 0.00062 40.1 11.8 71 2-73 237-337 (668)
342 2wvr_A Geminin; DNA replicatio 74.2 5.3 0.00018 38.6 6.3 20 554-573 125-144 (209)
343 3oja_B Anopheles plasmodium-re 74.0 16 0.00053 39.6 10.9 14 559-572 559-572 (597)
344 2v71_A Nuclear distribution pr 73.7 19 0.00065 34.5 10.0 39 535-573 72-110 (189)
345 1dip_A Delta-sleep-inducing pe 73.3 4.2 0.00014 33.4 4.5 30 544-573 15-44 (78)
346 1gd2_E Transcription factor PA 73.2 11 0.00039 30.5 7.2 24 549-572 41-64 (70)
347 1flg_A Protein (quinoprotein e 73.0 4.4 0.00015 44.5 6.3 61 5-65 496-557 (582)
348 1f5n_A Interferon-induced guan 73.0 21 0.00073 39.6 11.8 65 509-573 513-582 (592)
349 2q12_A DIP13 alpha, DCC-intera 73.0 22 0.00076 34.7 10.8 76 499-574 164-254 (265)
350 1cru_A Protein (soluble quinop 72.5 23 0.00078 37.6 11.5 98 2-100 34-162 (454)
351 3r2p_A Apolipoprotein A-I; amp 72.3 17 0.00059 34.1 9.4 55 506-560 73-127 (185)
352 3m0c_C LDL receptor, low-densi 71.9 83 0.0029 35.9 16.7 92 7-101 484-577 (791)
353 1gu4_A CAAT/enhancer binding p 71.9 3.4 0.00012 34.3 3.8 27 547-573 39-65 (78)
354 1kd8_A GABH AIV, GCN4 acid bas 71.7 7.2 0.00024 27.7 4.8 28 541-568 5-32 (36)
355 3s94_A LRP-6, low-density lipo 71.7 77 0.0026 34.9 16.0 100 2-103 47-148 (619)
356 3sbq_A Nitrous-oxide reductase 71.0 11 0.00038 42.2 8.8 95 2-100 330-453 (638)
357 1hjb_A Ccaat/enhancer binding 71.0 3.6 0.00012 34.8 3.8 39 532-573 27-65 (87)
358 2oxj_A Hybrid alpha/beta pepti 70.7 6.9 0.00024 27.4 4.5 27 540-566 4-30 (34)
359 1wmi_B RELB, hypothetical prot 70.6 2.5 8.6E-05 33.4 2.6 23 552-574 5-27 (67)
360 1nlw_A MAD protein, MAX dimeri 70.1 9 0.00031 31.6 6.1 22 549-570 59-80 (80)
361 3t98_B Nucleoporin NUP58/NUP45 69.4 36 0.0012 28.9 9.8 74 499-573 4-87 (93)
362 3hd7_B Syntaxin-1A; membrane p 69.4 51 0.0017 28.4 11.1 51 518-569 24-74 (109)
363 1s94_A S-syntaxin; three helix 69.3 14 0.00049 34.2 8.1 60 509-569 48-110 (180)
364 3trt_A Vimentin; cytoskeleton, 68.8 43 0.0015 26.8 10.3 64 508-571 13-76 (77)
365 3kya_A Putative phosphatase; s 68.7 37 0.0013 36.9 12.3 96 2-100 200-328 (496)
366 2de0_X Alpha-(1,6)-fucosyltran 68.1 16 0.00056 40.0 9.4 53 496-548 44-107 (526)
367 1t2k_D Cyclic-AMP-dependent tr 67.8 6.6 0.00022 30.6 4.5 29 545-573 23-51 (61)
368 1dh3_A Transcription factor CR 67.5 4.2 0.00015 31.3 3.3 22 552-573 23-44 (55)
369 4hw6_A Hypothetical protein, I 67.4 19 0.00065 37.7 9.5 59 41-100 231-291 (433)
370 1a93_A Coiled coil, LZ, MYC pr 67.0 4.4 0.00015 28.6 3.0 24 550-573 6-29 (34)
371 2wg5_A General control protein 66.5 4.2 0.00015 35.4 3.5 25 548-572 11-35 (109)
372 2w83_C C-JUN-amino-terminal ki 66.3 34 0.0012 28.2 8.5 34 539-572 25-58 (77)
373 2g8s_A Glucose/sorbosone dehyd 66.3 18 0.0006 36.7 8.7 97 2-103 25-150 (353)
374 3s4r_A Vimentin; alpha-helix, 66.2 48 0.0016 28.0 10.0 40 535-574 54-93 (93)
375 1go4_E MAD1 (mitotic arrest de 66.0 5.4 0.00018 34.6 4.0 28 545-572 13-40 (100)
376 3m48_A General control protein 65.8 7 0.00024 27.3 3.7 26 541-566 4-29 (33)
377 3s94_A LRP-6, low-density lipo 65.8 1.4E+02 0.0046 32.9 16.4 100 2-103 356-456 (619)
378 1w6s_A Methanol dehydrogenase 65.6 9 0.00031 42.4 6.8 53 5-57 483-535 (599)
379 3c3f_A Alpha/beta peptide with 65.3 10 0.00035 26.5 4.5 28 540-567 4-31 (34)
380 2xbg_A YCF48-like protein; pho 65.2 45 0.0015 33.0 11.4 94 2-99 170-267 (327)
381 3o0z_A RHO-associated protein 65.2 70 0.0024 30.1 11.7 65 500-565 41-111 (168)
382 3vmx_A Voltage-gated hydrogen 64.9 9.9 0.00034 28.8 4.7 30 545-574 12-41 (48)
383 3oja_A Leucine-rich immune mol 64.7 13 0.00045 39.4 7.7 41 531-571 422-462 (487)
384 2hy6_A General control protein 64.6 11 0.00037 26.5 4.5 27 540-566 4-30 (34)
385 1m1j_C Fibrinogen gamma chain; 64.0 24 0.00081 37.6 9.4 25 506-531 33-57 (409)
386 2ad6_A Methanol dehydrogenase 63.8 10 0.00036 41.3 6.8 55 5-59 474-528 (571)
387 1jnm_A Proto-oncogene C-JUN; B 63.8 8.7 0.0003 30.0 4.5 29 545-573 23-51 (62)
388 1uo4_A General control protein 63.6 12 0.00039 26.3 4.5 26 541-566 5-30 (34)
389 3ol1_A Vimentin; structural ge 63.5 77 0.0026 27.8 11.3 56 508-564 45-103 (119)
390 3c3g_A Alpha/beta peptide with 63.5 12 0.0004 26.1 4.5 28 540-567 3-30 (33)
391 1n7d_A LDL receptor, low-densi 63.1 14 0.00049 41.3 8.0 99 2-102 413-516 (699)
392 1gs9_A Apolipoprotein E, APOE4 62.8 12 0.00042 34.9 6.2 26 548-573 132-158 (165)
393 1nkp_B MAX protein, MYC proto- 62.4 14 0.00046 30.4 5.7 21 550-570 60-80 (83)
394 1am9_A Srebp-1A, protein (ster 61.9 8.4 0.00029 31.8 4.3 29 544-572 43-71 (82)
395 3twe_A Alpha4H; unknown functi 61.9 5.3 0.00018 26.0 2.4 20 553-572 3-22 (27)
396 2nps_B Syntaxin 13, vesicle-as 61.8 51 0.0017 26.1 8.9 52 518-570 9-60 (71)
397 1n7d_A LDL receptor, low-densi 61.4 13 0.00045 41.6 7.2 92 6-100 465-558 (699)
398 3nmd_A CGMP dependent protein 61.0 21 0.0007 29.2 6.3 30 545-574 41-70 (72)
399 3mq7_A Bone marrow stromal ant 60.7 91 0.0031 27.7 11.3 27 546-572 73-99 (121)
400 1cxz_B Protein (PKN); protein- 60.2 70 0.0024 26.9 9.6 22 504-525 18-39 (86)
401 2wt7_A Proto-oncogene protein 60.1 11 0.00038 29.6 4.5 28 546-573 25-52 (63)
402 3s84_A Apolipoprotein A-IV; fo 60.1 66 0.0023 32.2 11.4 36 503-538 47-82 (273)
403 2bni_A General control protein 59.7 15 0.00051 25.8 4.5 27 540-566 4-30 (34)
404 3vhl_A Dedicator of cytokinesi 59.6 9.2 0.00031 38.8 5.0 40 508-547 245-284 (288)
405 2wuj_A Septum site-determining 59.5 9.6 0.00033 29.5 4.0 21 553-573 29-49 (57)
406 2wq1_A General control protein 58.4 16 0.00056 25.4 4.5 26 540-565 3-28 (33)
407 2j4b_A TAF5, transcription ini 58.2 7 0.00024 35.4 3.5 63 500-564 10-76 (138)
408 2yy0_A C-MYC-binding protein; 57.3 7.9 0.00027 29.7 3.1 21 548-568 30-50 (53)
409 1gl2_B Syntaxin 7; membrane pr 57.0 60 0.0021 25.3 8.4 50 518-568 12-61 (65)
410 3i00_A HIP-I, huntingtin-inter 56.9 58 0.002 28.9 9.2 35 539-573 35-76 (120)
411 1f5n_A Interferon-induced guan 56.9 26 0.00089 39.0 8.5 49 520-568 535-584 (592)
412 4gq2_M Nucleoporin NUP120; bet 56.6 19 0.00065 42.0 7.7 30 4-33 245-274 (950)
413 1gmj_A ATPase inhibitor; coile 56.4 20 0.0007 30.1 5.7 10 517-526 35-44 (84)
414 3m9b_A Proteasome-associated A 56.3 7 0.00024 39.1 3.4 33 541-573 58-90 (251)
415 1kd8_B GABH BLL, GCN4 acid bas 56.2 25 0.00084 25.0 5.1 30 540-569 4-33 (36)
416 1gk7_A Vimentin; intermediate 56.1 12 0.0004 27.0 3.7 29 540-568 6-37 (39)
417 3hnw_A Uncharacterized protein 56.1 33 0.0011 31.1 7.6 20 552-571 104-123 (138)
418 3kya_A Putative phosphatase; s 56.1 76 0.0026 34.4 11.9 100 2-103 146-268 (496)
419 3a7p_A Autophagy protein 16; c 55.9 71 0.0024 29.6 9.8 55 514-572 74-131 (152)
420 1vcs_A Vesicle transport throu 55.9 16 0.00055 31.3 5.3 58 501-566 39-96 (102)
421 2w6b_A RHO guanine nucleotide 55.8 11 0.00038 29.2 3.7 13 557-569 16-28 (56)
422 1ci6_A Transcription factor AT 55.5 15 0.00051 28.9 4.5 23 550-572 29-51 (63)
423 2dfs_A Myosin-5A; myosin-V, in 55.3 30 0.001 41.2 9.2 18 555-572 1020-1037(1080)
424 3s84_A Apolipoprotein A-IV; fo 55.2 57 0.002 32.6 10.0 18 512-529 34-51 (273)
425 2dfs_A Myosin-5A; myosin-V, in 53.8 43 0.0015 39.9 10.1 40 532-571 1004-1043(1080)
426 1zxa_A CGMP-dependent protein 53.7 12 0.00041 30.2 3.7 24 551-574 32-55 (67)
427 3hnw_A Uncharacterized protein 53.5 63 0.0021 29.2 9.0 47 520-567 87-133 (138)
428 2xzh_A Clathrin heavy chain 1; 53.4 1.9E+02 0.0064 30.3 13.7 93 2-100 74-170 (365)
429 1tl2_A L10, protein (tachylect 53.2 21 0.00071 35.4 6.2 93 2-99 48-152 (236)
430 3b5n_B Protein SSO1; snare com 53.0 82 0.0028 24.8 8.9 53 518-571 13-65 (69)
431 1zxa_A CGMP-dependent protein 52.9 22 0.00076 28.6 5.2 24 550-573 24-47 (67)
432 3a2a_A Voltage-gated hydrogen 52.8 20 0.0007 27.8 4.7 27 548-574 22-48 (58)
433 3ghg_A Fibrinogen alpha chain; 52.7 31 0.0011 37.9 7.9 18 553-570 133-150 (562)
434 3f5h_A Type I polyketide synth 52.7 45 0.0015 26.9 7.0 44 529-572 19-62 (68)
435 4dzn_A Coiled-coil peptide CC- 52.5 26 0.00087 23.8 4.5 23 550-572 8-30 (33)
436 2xus_A Breast cancer metastasi 52.3 29 0.001 26.3 5.4 39 517-565 8-46 (49)
437 3amr_A 3-phytase; beta-propell 51.9 1.3E+02 0.0046 31.2 12.4 84 7-94 41-142 (355)
438 3v86_A De novo design helix; c 51.7 20 0.00068 23.3 3.8 21 550-570 6-26 (27)
439 1a93_B MAX protein, coiled coi 51.6 16 0.00053 25.8 3.5 22 552-573 8-29 (34)
440 3e0s_A Uncharacterized protein 51.3 46 0.0016 33.7 8.7 72 502-573 18-94 (326)
441 2ve7_C Kinetochore protein NUF 51.2 25 0.00085 34.9 6.5 42 533-574 130-171 (250)
442 1z0k_B FYVE-finger-containing 51.1 31 0.001 28.0 5.7 20 547-566 49-68 (69)
443 3m91_A Proteasome-associated A 51.0 44 0.0015 25.5 6.3 19 552-570 31-49 (51)
444 1p9i_A Cortexillin I/GCN4 hybr 50.4 15 0.00052 24.5 3.2 23 549-571 4-26 (31)
445 1hlo_A Protein (transcription 50.3 18 0.0006 29.5 4.4 24 550-573 56-79 (80)
446 4fla_A Regulation of nuclear P 50.0 1.5E+02 0.0053 27.1 12.1 68 502-569 70-142 (152)
447 2wt7_B Transcription factor MA 49.9 27 0.00092 29.7 5.5 58 502-572 26-83 (90)
448 2zxx_A Geminin; coiled-coil, c 49.6 38 0.0013 28.1 6.3 7 562-568 52-58 (79)
449 4i0x_B ESAT-6-like protein MAB 48.7 1.2E+02 0.0039 25.3 9.6 70 500-573 11-82 (103)
450 2v4h_A NF-kappa-B essential mo 48.7 1.1E+02 0.0037 26.9 9.3 23 550-572 82-104 (110)
451 1n7s_B Syntaxin 1A; neuronal s 48.6 96 0.0033 24.3 8.4 50 518-568 15-64 (68)
452 2r2v_A GCN4 leucine zipper; co 48.6 29 0.00099 24.3 4.5 27 540-566 4-30 (34)
453 1sfc_B Protein (syntaxin 1A), 48.4 1E+02 0.0036 25.0 8.9 53 518-571 24-76 (83)
454 2cly_A ATP synthase B chain, m 48.3 56 0.0019 31.8 8.3 69 497-572 75-143 (214)
455 4a0p_A LRP6, LRP-6, low-densit 48.1 3.1E+02 0.011 30.1 17.3 101 2-104 347-454 (628)
456 2xbg_A YCF48-like protein; pho 47.9 1.4E+02 0.0046 29.4 11.5 90 5-99 132-222 (327)
457 2v66_B Nuclear distribution pr 47.8 82 0.0028 27.7 8.5 19 553-571 37-55 (111)
458 2dgc_A Protein (GCN4); basic d 47.6 20 0.0007 28.2 4.2 28 541-568 34-61 (63)
459 3n7n_E Monopolin complex subun 47.2 4 0.00014 34.9 0.0 25 549-573 48-72 (95)
460 3a9g_A Putative uncharacterize 46.6 90 0.0031 31.5 10.1 56 41-98 138-214 (354)
461 3w03_C DNA repair protein XRCC 46.5 36 0.0012 32.4 6.5 27 547-573 155-181 (184)
462 1fmh_A General control protein 46.4 17 0.00059 24.6 3.0 20 553-572 3-22 (33)
463 2a01_A Apolipoprotein A-I; fou 45.9 25 0.00087 34.4 5.6 58 503-560 113-170 (243)
464 2j49_A Transcription initiatio 45.5 16 0.00054 33.5 3.7 64 499-565 11-79 (148)
465 1jth_B Syntaxin 1A; coiled-coi 45.4 1.2E+02 0.004 24.3 10.3 51 518-569 13-63 (77)
466 4dzn_A Coiled-coil peptide CC- 44.7 17 0.0006 24.6 2.8 20 552-571 3-22 (33)
467 3s25_A Hypothetical 7-bladed b 44.6 74 0.0025 31.7 9.0 92 2-104 111-206 (302)
468 1deq_A Fibrinogen (alpha chain 43.6 80 0.0027 33.3 9.0 23 529-551 94-116 (390)
469 3rvy_A ION transport protein; 43.6 4.9 0.00017 39.7 0.0 23 551-573 256-278 (285)
470 3m91_A Proteasome-associated A 42.9 41 0.0014 25.6 5.0 33 541-573 13-45 (51)
471 3kin_B Kinesin heavy chain; mo 42.8 32 0.0011 30.2 5.2 25 547-571 92-116 (117)
472 1bpo_A Protein (clathrin); cla 42.6 2.4E+02 0.0081 30.8 12.8 93 2-100 73-169 (494)
473 3efg_A Protein SLYX homolog; x 42.2 74 0.0025 26.1 6.9 32 543-574 27-58 (78)
474 3sre_A PON1, serum paraoxonase 42.0 1.6E+02 0.0053 30.3 11.1 81 15-100 138-239 (355)
475 1got_G GT-gamma; complex (GTP- 41.6 14 0.00049 30.1 2.5 15 553-567 19-33 (73)
476 2p0t_A UPF0307 protein pspto_4 41.2 23 0.00079 33.5 4.2 44 497-540 67-110 (176)
477 3r2p_A Apolipoprotein A-I; amp 41.2 78 0.0027 29.5 7.9 48 503-550 81-128 (185)
478 1gs9_A Apolipoprotein E, APOE4 40.9 49 0.0017 30.7 6.4 62 502-566 97-158 (165)
479 3q4f_C DNA repair protein XRCC 40.9 43 0.0015 31.9 6.0 21 547-567 164-184 (186)
480 4a2l_A BT_4663, two-component 40.6 3.2E+02 0.011 30.2 14.1 90 4-99 415-515 (795)
481 4a2l_A BT_4663, two-component 40.5 1.8E+02 0.006 32.2 12.1 90 5-98 183-279 (795)
482 1m1j_B Fibrinogen beta chain; 40.4 1.5E+02 0.0052 32.0 11.0 12 556-567 180-191 (464)
483 3ei3_A DNA damage-binding prot 40.4 2.1E+02 0.0071 34.2 13.2 64 6-71 523-593 (1158)
484 3nmd_A CGMP dependent protein 39.5 70 0.0024 26.1 6.2 20 553-572 42-61 (72)
485 1hlo_A Protein (transcription 39.4 17 0.0006 29.5 2.7 22 546-567 59-80 (80)
486 3he5_A Synzip1; heterodimeric 38.6 28 0.00097 25.4 3.4 16 552-567 11-26 (49)
487 3bbp_D GRIP and coiled-coil do 38.2 54 0.0018 26.6 5.2 32 541-572 33-64 (71)
488 1am9_A Srebp-1A, protein (ster 38.1 54 0.0018 26.8 5.5 28 545-572 51-78 (82)
489 2jee_A YIIU; FTSZ, septum, coi 38.0 1.7E+02 0.006 24.2 9.7 30 539-568 36-65 (81)
490 3tnu_A Keratin, type I cytoske 37.9 2.1E+02 0.0072 25.2 10.4 26 545-570 85-110 (131)
491 4ath_A MITF, microphthalmia-as 37.6 37 0.0013 28.4 4.4 19 554-572 42-60 (83)
492 1m1j_A Fibrinogen alpha subuni 37.4 1.8E+02 0.006 31.5 10.6 24 529-552 92-115 (491)
493 1v9d_A Diaphanous protein homo 36.6 2E+02 0.0067 29.2 10.8 74 498-572 244-324 (340)
494 1vcs_A Vesicle transport throu 36.3 2E+02 0.0067 24.4 9.8 26 547-572 70-95 (102)
495 3nr7_A DNA-binding protein H-N 36.2 1.1E+02 0.0036 25.7 7.1 54 517-573 14-67 (86)
496 2a01_A Apolipoprotein A-I; fou 36.2 21 0.0007 35.1 3.2 25 548-572 114-139 (243)
497 3oa7_A Head morphogenesis prot 35.6 1.1E+02 0.0037 29.6 7.8 48 518-572 8-65 (206)
498 1wt6_A Myotonin-protein kinase 35.3 1.9E+02 0.0066 24.0 9.1 26 541-566 49-74 (81)
499 2ve7_A Kinetochore protein HEC 35.2 20 0.0007 36.6 3.1 38 536-573 170-207 (315)
500 3a7o_A Autophagy protein 16; c 35.1 1.8E+02 0.0062 23.6 8.7 57 510-574 13-69 (75)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.66 E-value=4.8e-16 Score=154.22 Aligned_cols=100 Identities=14% Similarity=0.169 Sum_probs=90.4
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|+|+|++|++|+.||.|+|||+.++..+..+..|...+ .+++|+|++ .+|++|+.|++|++||+... ..+..+.+|.
T Consensus 21 fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v-~~~~~~~~~-~~l~s~s~d~~i~vwd~~~~-~~~~~~~~h~ 97 (304)
T 2ynn_A 21 FHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPV-RAGKFIARK-NWIIVGSDDFRIRVFNYNTG-EKVVDFEAHP 97 (304)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-EEEEEEGGG-TEEEEEETTSEEEEEETTTC-CEEEEEECCS
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcE-EEEEEeCCC-CEEEEECCCCEEEEEECCCC-cEEEEEeCCC
Confidence 89999999999999999999999999999999888777 777999998 56999999999999999764 3456789999
Q ss_pred CCeEEEEEcCCCCEEEEEEecCC
Q 008196 82 APTAGISFSSDDKAVSSLCWQRA 104 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~s 104 (574)
..|.+++|+|++.+|+++++|..
T Consensus 98 ~~v~~~~~~~~~~~l~sgs~D~~ 120 (304)
T 2ynn_A 98 DYIRSIAVHPTKPYVLSGSDDLT 120 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSC
T ss_pred CcEEEEEEcCCCCEEEEECCCCe
Confidence 99999999999999999997643
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.57 E-value=3.9e-14 Score=140.50 Aligned_cols=106 Identities=16% Similarity=0.251 Sum_probs=92.7
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|++++++|++|+.|+.|+|||+.+++++..+.+|.+.+ .+|+|+|++ .+|++|+.|++|++||+.........+.+|.
T Consensus 63 ~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v-~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~ 140 (304)
T 2ynn_A 63 FIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYI-RSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGHE 140 (304)
T ss_dssp EEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-EEEEECSSS-SEEEEEETTSCEEEEEGGGTTEEEEEECCCC
T ss_pred EeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcE-EEEEEcCCC-CEEEEECCCCeEEEEECCCCcchhhhhcccC
Confidence 78899999999999999999999999999999998887 888999998 5699999999999999976555666789999
Q ss_pred CCeEEEEEcC-CCCEEEEEEecCCcCEEEec
Q 008196 82 APTAGISFSS-DDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 ~~VtSVaFSP-DG~~LaS~sWD~sg~viv~e 111 (574)
..|.+++|+| ++..|++++.|. .+.+++
T Consensus 141 ~~v~~v~~~p~~~~~l~sgs~D~--~v~iwd 169 (304)
T 2ynn_A 141 HFVMCVAFNPKDPSTFASGCLDR--TVKVWS 169 (304)
T ss_dssp SCEEEEEECTTCTTEEEEEETTS--EEEEEE
T ss_pred CcEEEEEECCCCCCEEEEEeCCC--eEEEEE
Confidence 9999999999 678999998664 444444
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.55 E-value=2.8e-14 Score=146.13 Aligned_cols=105 Identities=15% Similarity=0.173 Sum_probs=87.5
Q ss_pred ccC-CCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNC-KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSp-DG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
|++ ++++|++|+.||.|+|||+.+++++..+.+|.+.| .+|+|+|++..+|++|+.|++|+|||+.... +..+.+|
T Consensus 222 ~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v-~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~--~~~~~~H 298 (344)
T 4gqb_B 222 WHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCV-TGLVFSPHSVPFLASLSEDCSLAVLDSSLSE--LFRSQAH 298 (344)
T ss_dssp ECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCE-EEEEECSSSSCCEEEEETTSCEEEECTTCCE--EEEECCC
T ss_pred ecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCE-EEEEEccCCCeEEEEEeCCCeEEEEECCCCc--EEEEcCC
Confidence 566 46789999999999999999999999999998888 7889999987789999999999999997743 3467899
Q ss_pred CCCeEEEEEcCCCCE-EEEEEecCCcCEEEec
Q 008196 81 SAPTAGISFSSDDKA-VSSLCWQRAKPVFIDE 111 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~-LaS~sWD~sg~viv~e 111 (574)
...|++|+|+|++.. |+++++|. .+.+|.
T Consensus 299 ~~~V~~v~~sp~~~~llas~s~D~--~v~~w~ 328 (344)
T 4gqb_B 299 RDFVRDATWSPLNHSLLTTVGWDH--QVVHHV 328 (344)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTS--CEEEEE
T ss_pred CCCEEEEEEeCCCCeEEEEEcCCC--eEEEEE
Confidence 999999999999875 56788775 444444
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.55 E-value=9.8e-14 Score=139.66 Aligned_cols=105 Identities=27% Similarity=0.379 Sum_probs=92.6
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|+|+|++||+|+.|+.|+|||+.+++.+..+.+|...+ .+|+|+|++ .+|++|+.|++|+|||+... .....+.+|.
T Consensus 172 ~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~l~~spd~-~~l~s~s~dg~i~iwd~~~~-~~~~~~~~h~ 248 (321)
T 3ow8_A 172 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI-RSLTFSPDS-QLLVTASDDGYIKIYDVQHA-NLAGTLSGHA 248 (321)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCC-CEEEECTTS-CEEEEECTTSCEEEEETTTC-CEEEEECCCS
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCce-eEEEEcCCC-CEEEEEcCCCeEEEEECCCc-ceeEEEcCCC
Confidence 88999999999999999999999999999999988877 778999998 66999999999999999764 3556789999
Q ss_pred CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..|.+++|+|++.+|++++.|. .+.+++
T Consensus 249 ~~v~~~~~sp~~~~l~s~s~D~--~v~iwd 276 (321)
T 3ow8_A 249 SWVLNVAFCPDDTHFVSSSSDK--SVKVWD 276 (321)
T ss_dssp SCEEEEEECTTSSEEEEEETTS--CEEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCC--cEEEEe
Confidence 9999999999999999988654 444444
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.54 E-value=4.4e-14 Score=146.71 Aligned_cols=105 Identities=16% Similarity=0.170 Sum_probs=92.4
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|+++|++|++|+.|++|+|||+.+++++..+.+|...+ .+|+|+|++ .+|++|+.|++|++||+... ..+..+.+|.
T Consensus 158 ~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V-~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~-~~~~~~~~h~ 234 (410)
T 1vyh_C 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV-SSVSIMPNG-DHIVSASRDKTIKMWEVQTG-YCVKTFTGHR 234 (410)
T ss_dssp ECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCE-EEEEECSSS-SEEEEEETTSEEEEEETTTC-CEEEEEECCS
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCE-EEEEEeCCC-CEEEEEeCCCeEEEEECCCC-cEEEEEeCCC
Confidence 78999999999999999999999999999999998887 888999998 56999999999999999764 3456788999
Q ss_pred CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..|.+++|++++.+|++++.| +.+.+++
T Consensus 235 ~~v~~~~~~~~g~~l~s~s~D--~~v~vwd 262 (410)
T 1vyh_C 235 EWVRMVRPNQDGTLIASCSND--QTVRVWV 262 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETT--SCEEEEE
T ss_pred ccEEEEEECCCCCEEEEEcCC--CeEEEEE
Confidence 999999999999999999865 4444444
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.54 E-value=7.4e-14 Score=140.57 Aligned_cols=105 Identities=15% Similarity=0.277 Sum_probs=92.9
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|+|++++|++|+.|+.|+|||+.++..+..+.+|...+ .+|+|+|++ .+|++|+.|++|+|||+... ..+..+.+|.
T Consensus 214 ~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v-~~~~~sp~~-~~l~s~s~D~~v~iwd~~~~-~~~~~~~~h~ 290 (321)
T 3ow8_A 214 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV-LNVAFCPDD-THFVSSSSDKSVKVWDVGTR-TCVHTFFDHQ 290 (321)
T ss_dssp ECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCE-EEEEECTTS-SEEEEEETTSCEEEEETTTT-EEEEEECCCS
T ss_pred EcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCce-EEEEECCCC-CEEEEEeCCCcEEEEeCCCC-EEEEEEcCCC
Confidence 89999999999999999999999999999999998887 777999998 56999999999999999764 4566788999
Q ss_pred CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..|++++|+|++.+|++++.| +.+.+++
T Consensus 291 ~~v~~v~~s~~g~~l~s~~~d--~~i~vwd 318 (321)
T 3ow8_A 291 DQVWGVKYNGNGSKIVSVGDD--QEIHIYD 318 (321)
T ss_dssp SCEEEEEECTTSSEEEEEETT--CCEEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCC--CeEEEEe
Confidence 999999999999999999865 4455554
No 7
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.53 E-value=6.9e-14 Score=148.23 Aligned_cols=97 Identities=25% Similarity=0.412 Sum_probs=87.8
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|+|||++||+|+.|+.|+|||. +++++..+.+|.+.| .+|+|+|++ .+|++++.|++|+|||+.+. .+..+.+|.
T Consensus 24 ~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V-~~l~fspdg-~~las~~~d~~i~vWd~~~~--~~~~~~~~~ 98 (577)
T 2ymu_A 24 FSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV-WGVAFSPDG-QTIASASDDKTVKLWNRNGQ--LLQTLTGHS 98 (577)
T ss_dssp ECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCE-EEEEECTTS-SEEEEEETTSCEEEEETTSC--EEEEECCCS
T ss_pred ECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCE-EEEEECCCC-CEEEEEeCCCEEEEEECCCC--EEEEEECCC
Confidence 8999999999999999999996 789999999998888 888999998 56999999999999998653 566789999
Q ss_pred CCeEEEEEcCCCCEEEEEEecC
Q 008196 82 APTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
..|.+++|+|++++|++++.|.
T Consensus 99 ~~v~~~~~s~d~~~l~~~~~d~ 120 (577)
T 2ymu_A 99 SSVRGVAFSPDGQTIASASDDK 120 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTS
T ss_pred CCEEEEEECCCCCEEEEEcCCC
Confidence 9999999999999999987554
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.52 E-value=1.6e-13 Score=142.50 Aligned_cols=99 Identities=17% Similarity=0.302 Sum_probs=90.2
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|+|++.+|++|+.||.|+|||+.+++.+..+.+|.+.| .+|+|+|++ .+|++|+.|++|+|||+.+. ..+..+.+|.
T Consensus 116 ~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V-~~v~~~~~~-~~l~sgs~D~~i~iwd~~~~-~~~~~~~~h~ 192 (410)
T 1vyh_C 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSV-QDISFDHSG-KLLASCSADMTIKLWDFQGF-ECIRTMHGHD 192 (410)
T ss_dssp ECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCE-EEEEECTTS-SEEEEEETTSCCCEEETTSS-CEEECCCCCS
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcE-EEEEEcCCC-CEEEEEeCCCeEEEEeCCCC-ceeEEEcCCC
Confidence 89999999999999999999999999999999998888 888999998 56999999999999999764 4556789999
Q ss_pred CCeEEEEEcCCCCEEEEEEecC
Q 008196 82 APTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
..|.+++|+|++.+|+++++|.
T Consensus 193 ~~V~~v~~~p~~~~l~s~s~D~ 214 (410)
T 1vyh_C 193 HNVSSVSIMPNGDHIVSASRDK 214 (410)
T ss_dssp SCEEEEEECSSSSEEEEEETTS
T ss_pred CCEEEEEEeCCCCEEEEEeCCC
Confidence 9999999999999999988654
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.51 E-value=1.3e-13 Score=140.87 Aligned_cols=105 Identities=19% Similarity=0.286 Sum_probs=90.2
Q ss_pred ccCC-CCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNCK-DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSpD-G~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
|+|+ +++|++|+.|+.|+|||+.+++++..+.+|...+ .+|+|+|++..+|++|+.|++|+|||+.... . ....+|
T Consensus 234 ~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v-~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~-~-~~~~~H 310 (357)
T 4g56_B 234 WHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNI-TGLAYSYHSSPFLASISEDCTVAVLDADFSE-V-FRDLSH 310 (357)
T ss_dssp ECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCE-EEEEECSSSSCCEEEEETTSCEEEECTTSCE-E-EEECCC
T ss_pred hhhcccceEEEeecccceeEEECCCCcEeEEEeccceeE-EEEEEcCCCCCEEEEEeCCCEEEEEECCCCc-E-eEECCC
Confidence 7776 5689999999999999999999999999988887 7889999987889999999999999997743 2 345689
Q ss_pred CCCeEEEEEcC-CCCEEEEEEecCCcCEEEec
Q 008196 81 SAPTAGISFSS-DDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 81 ~~~VtSVaFSP-DG~~LaS~sWD~sg~viv~e 111 (574)
...|++|+|+| |+.+|+++++|. .+.+|+
T Consensus 311 ~~~V~~vafsP~d~~~l~s~s~Dg--~v~iW~ 340 (357)
T 4g56_B 311 RDFVTGVAWSPLDHSKFTTVGWDH--KVLHHH 340 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTS--CEEEEE
T ss_pred CCCEEEEEEeCCCCCEEEEEcCCC--eEEEEE
Confidence 99999999998 799999999774 455554
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.50 E-value=2.7e-13 Score=137.03 Aligned_cols=106 Identities=17% Similarity=0.248 Sum_probs=87.3
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeE--Ee-cCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCC-ceeEEe
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAA--EL-KDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS-PKVSWL 77 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~--t~-~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~-~ll~tl 77 (574)
|+|+|++||+|+.|+.|+|||+.++.... .+ .+|...| .+|+|+|++ .+|++|+.|++|+|||+.... ..+..+
T Consensus 24 ~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v-~~~~~sp~g-~~l~s~s~D~~v~iw~~~~~~~~~~~~~ 101 (345)
T 3fm0_A 24 WNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTV-RKVAWSPCG-NYLASASFDATTCIWKKNQDDFECVTTL 101 (345)
T ss_dssp ECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCE-EEEEECTTS-SEEEEEETTSCEEEEEECCC-EEEEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcE-EEEEECCCC-CEEEEEECCCcEEEEEccCCCeEEEEEc
Confidence 89999999999999999999998776432 22 4677666 888999998 569999999999999996543 345678
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 78 KQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 78 ~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.+|...|.+++|+|++.+|++++.|. .+.+++
T Consensus 102 ~~h~~~v~~v~~sp~~~~l~s~s~D~--~v~iwd 133 (345)
T 3fm0_A 102 EGHENEVKSVAWAPSGNLLATCSRDK--SVWVWE 133 (345)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS--CEEEEE
T ss_pred cCCCCCceEEEEeCCCCEEEEEECCC--eEEEEE
Confidence 99999999999999999999998664 444444
No 11
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.50 E-value=4.3e-13 Score=134.72 Aligned_cols=103 Identities=16% Similarity=0.247 Sum_probs=82.9
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCC-------CceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCC---C
Q 008196 2 YNCKDEHLASISLSGDLILHNLAS-------GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR---S 71 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~T-------g~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~---~ 71 (574)
|+|++++||+|+.|+.|+|||+.. ...+..+.+|.+.| .+|+|+|++ .+|++|+.|++|+|||+... .
T Consensus 66 ~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V-~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~~ 143 (330)
T 2hes_X 66 WRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEV-KGVAWSNDG-YYLATCSRDKSVWIWETDESGEEY 143 (330)
T ss_dssp ECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CE-EEEEECTTS-CEEEEEETTSCEEEEECCTTCCCC
T ss_pred ECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcE-EEEEECCCC-CEEEEEeCCCEEEEEeccCCCCCe
Confidence 899999999999999999999853 34577888888887 788999998 56999999999999999421 1
Q ss_pred ceeEEeccCCCCeEEEEEcCCCCEEEEEEecCCcC
Q 008196 72 PKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKP 106 (574)
Q Consensus 72 ~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~ 106 (574)
..+..+.+|...|.+++|+|++.+|+++++|...+
T Consensus 144 ~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~ 178 (330)
T 2hes_X 144 ECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVR 178 (330)
T ss_dssp EEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred EEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 34556889999999999999999999999775433
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.49 E-value=1.3e-12 Score=128.34 Aligned_cols=105 Identities=25% Similarity=0.306 Sum_probs=92.3
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|+++|++|++|+.|+.|+|||+.+++....+.+|...+ .+++|+|++ .+|++|+.|+.|++||+... ..+..+.+|.
T Consensus 31 ~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v-~~~~~~~~~-~~l~s~~~d~~i~vwd~~~~-~~~~~~~~~~ 107 (312)
T 4ery_A 31 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI-SDVAWSSDS-NLLVSASDDKTLKIWDVSSG-KCLKTLKGHS 107 (312)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE-EEEEECTTS-SEEEEEETTSEEEEEETTTC-CEEEEEECCS
T ss_pred ECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCce-EEEEEcCCC-CEEEEECCCCEEEEEECCCC-cEEEEEcCCC
Confidence 89999999999999999999999999999999888877 788999998 66999999999999999764 3556788999
Q ss_pred CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..|.+++|+|++.+|++++.|. .+.+++
T Consensus 108 ~~v~~~~~~~~~~~l~s~~~d~--~i~iwd 135 (312)
T 4ery_A 108 NYVFCCNFNPQSNLIVSGSFDE--SVRIWD 135 (312)
T ss_dssp SCEEEEEECSSSSEEEEEETTS--CEEEEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCC--cEEEEE
Confidence 9999999999999999988654 444444
No 13
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.48 E-value=6.9e-13 Score=131.02 Aligned_cols=101 Identities=12% Similarity=0.230 Sum_probs=85.9
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCC--CceeEEecCCCCCeEEEEEEccC--CCeEEEEEeCCCcEEEEeCCCCC-ceeEE
Q 008196 2 YNCKDEHLASISLSGDLILHNLAS--GAKAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PKVSW 76 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~T--g~~l~t~~gh~~~Vvs~LafSPd--Gr~LLaSgS~DGtVrLWDl~~~~-~ll~t 76 (574)
|+++|++||+|+.|++|+|||+.. ++.+..+.+|.+.| .+|+|+++ + .+|++|+.|++|+|||+.... ..+..
T Consensus 17 ~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V-~~v~~s~~~~g-~~l~s~s~D~~v~iWd~~~~~~~~~~~ 94 (297)
T 2pm7_B 17 MDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPV-WRVDWAHPKFG-TILASCSYDGKVMIWKEENGRWSQIAV 94 (297)
T ss_dssp ECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCE-EEEEECCGGGC-SEEEEEETTTEEEEEEBSSSCBCCCEE
T ss_pred ECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCe-EEEEecCCCcC-CEEEEEcCCCEEEEEEcCCCceEEEEE
Confidence 899999999999999999999964 36788999998888 77899864 5 679999999999999996532 34456
Q ss_pred eccCCCCeEEEEEcCC--CCEEEEEEecCC
Q 008196 77 LKQHSAPTAGISFSSD--DKAVSSLCWQRA 104 (574)
Q Consensus 77 l~gH~~~VtSVaFSPD--G~~LaS~sWD~s 104 (574)
+.+|...|.+++|+|+ +.+|+++++|..
T Consensus 95 ~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~ 124 (297)
T 2pm7_B 95 HAVHSASVNSVQWAPHEYGPMLLVASSDGK 124 (297)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred eecCCCceeEEEeCcCCCCcEEEEEECCCc
Confidence 7889999999999997 889999987643
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.48 E-value=3.9e-13 Score=146.87 Aligned_cols=107 Identities=17% Similarity=0.217 Sum_probs=91.2
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCC-CCceeEEeccC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG-RSPKVSWLKQH 80 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~-~~~ll~tl~gH 80 (574)
|+|||++||+++ ++.|+|||+.++..+..+.+|...| .+++|+|+| .+|++|+.|++|+|||+.. .......+.+|
T Consensus 26 ~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v-~~~~~spdg-~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~ 102 (611)
T 1nr0_A 26 NTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQT-TVAKTSPSG-YYCASGDVHGNVRIWDTTQTTHILKTTIPVF 102 (611)
T ss_dssp ECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCE-EEEEECTTS-SEEEEEETTSEEEEEESSSTTCCEEEEEECS
T ss_pred eCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCce-EEEEECCCC-cEEEEEeCCCCEEEeECCCCcceeeEeeccc
Confidence 899999999998 5699999999899999999998887 888999999 6699999999999999953 33445578899
Q ss_pred CCCeEEEEEcCCCCEEEEEEecCC--cCEEEec
Q 008196 81 SAPTAGISFSSDDKAVSSLCWQRA--KPVFIDE 111 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~LaS~sWD~s--g~viv~e 111 (574)
...|.+++|+||++.|++++.+.. +.+.+++
T Consensus 103 ~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd 135 (611)
T 1nr0_A 103 SGPVKDISWDSESKRIAAVGEGRERFGHVFLFD 135 (611)
T ss_dssp SSCEEEEEECTTSCEEEEEECCSSCSEEEEETT
T ss_pred CCceEEEEECCCCCEEEEEECCCCceeEEEEee
Confidence 999999999999999999886543 3455554
No 15
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.47 E-value=1.5e-13 Score=141.05 Aligned_cols=104 Identities=19% Similarity=0.235 Sum_probs=86.2
Q ss_pred ccCCCCEEEEEeCCC----cEEEEECCCCce----eEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCce
Q 008196 2 YNCKDEHLASISLSG----DLILHNLASGAK----AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK 73 (574)
Q Consensus 2 FSpDG~~LASGS~DG----tVrIWDl~Tg~~----l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~l 73 (574)
|+|||+++++++.|+ .|++||+..+.. ...+.+|...| .+|+|+|+| .+||+|+.|++|+|||+.+...+
T Consensus 227 fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V-~~~~~Spdg-~~lasgs~D~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 227 FIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGI-TSMDVDMKG-ELAVLASNDNSIALVKLKDLSMS 304 (365)
T ss_dssp EEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCE-EEEEECTTS-CEEEEEETTSCEEEEETTTTEEE
T ss_pred EcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCe-EeEEECCCC-CceEEEcCCCEEEEEECCCCcEE
Confidence 889999999999887 688999876643 34566777777 788999999 66999999999999999875444
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEEecCCcCE
Q 008196 74 VSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPV 107 (574)
Q Consensus 74 l~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~v 107 (574)
...+.+|...|++|+|+|||++|+++++|...++
T Consensus 305 ~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrv 338 (365)
T 4h5i_A 305 KIFKQAHSFAITEVTISPDSTYVASVSAANTIHI 338 (365)
T ss_dssp EEETTSSSSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred EEecCcccCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 4446899999999999999999999997754433
No 16
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.47 E-value=7.5e-13 Score=133.77 Aligned_cols=103 Identities=16% Similarity=0.285 Sum_probs=88.2
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCC--ceeEEe
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS--PKVSWL 77 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~--~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~--~ll~tl 77 (574)
|+|+|++||+|+.|+.|+|||+..+. ++..+.+|.+.| .+|+|+|++ .+|++|+.|++|++||+.... ..+..+
T Consensus 69 ~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v-~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 146 (345)
T 3fm0_A 69 WSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEV-KSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEYECVSVL 146 (345)
T ss_dssp ECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCE-EEEEECTTS-SEEEEEETTSCEEEEEECTTSCEEEEEEE
T ss_pred ECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCc-eEEEEeCCC-CEEEEEECCCeEEEEECCCCCCeEEEEEe
Confidence 89999999999999999999997764 577888888887 788999998 669999999999999996532 234567
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEEecCCcC
Q 008196 78 KQHSAPTAGISFSSDDKAVSSLCWQRAKP 106 (574)
Q Consensus 78 ~gH~~~VtSVaFSPDG~~LaS~sWD~sg~ 106 (574)
.+|...|.+++|+|++.+|+++++|...+
T Consensus 147 ~~h~~~v~~~~~~p~~~~l~s~s~d~~i~ 175 (345)
T 3fm0_A 147 NSHTQDVKHVVWHPSQELLASASYDDTVK 175 (345)
T ss_dssp CCCCSCEEEEEECSSSSCEEEEETTSCEE
T ss_pred cCcCCCeEEEEECCCCCEEEEEeCCCcEE
Confidence 89999999999999999999998775433
No 17
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.47 E-value=2.5e-13 Score=143.92 Aligned_cols=102 Identities=25% Similarity=0.401 Sum_probs=89.8
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|+||+++||+++.|+.|+|||. +++++..+.+|...| .+|+|+|+| .+|++++.|+.|+|||..+. .+..+.+|.
T Consensus 475 ~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v-~~l~~s~dg-~~l~s~~~dg~v~lwd~~~~--~~~~~~~h~ 549 (577)
T 2ymu_A 475 FSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV-RGVAFSPDG-QTIASASDDKTVKLWNRNGQ--LLQTLTGHS 549 (577)
T ss_dssp ECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCE-EEEEECTTS-SCEEEEETTSEEEEECTTSC--EEEEEECCS
T ss_pred EcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCE-EEEEEcCCC-CEEEEEECcCEEEEEeCCCC--EEEEEcCCC
Confidence 8999999999999999999996 788999999998888 788999999 55999999999999998653 566789999
Q ss_pred CCeEEEEEcCCCCEEEEEEecCCcCEEEe
Q 008196 82 APTAGISFSSDDKAVSSLCWQRAKPVFID 110 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~sg~viv~ 110 (574)
..|++++|+|||++|++++.|. .+.+|
T Consensus 550 ~~v~~~~fs~dg~~l~s~~~D~--~i~~W 576 (577)
T 2ymu_A 550 SSVWGVAFSPDGQTIASASSDK--TVKLW 576 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTS--CEEEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCC--EEEEe
Confidence 9999999999999999998664 44444
No 18
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.47 E-value=1.7e-12 Score=127.44 Aligned_cols=105 Identities=22% Similarity=0.334 Sum_probs=92.1
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|++++++|++|+.|+.|+|||+.+++++..+.+|...+ .+++|+|++ .+|++|+.|+.|++||+... ..+..+..|.
T Consensus 73 ~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v-~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~ 149 (312)
T 4ery_A 73 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQS-NLIVSGSFDESVRIWDVKTG-KCLKTLPAHS 149 (312)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-EEEEECSSS-SEEEEEETTSCEEEEETTTC-CEEEEECCCS
T ss_pred EcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCE-EEEEEcCCC-CEEEEEeCCCcEEEEECCCC-EEEEEecCCC
Confidence 88999999999999999999999999999999888777 778999998 66999999999999999764 3456788999
Q ss_pred CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..|.+++|+|++.+|++++.| +.+.+++
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d--~~i~~wd 177 (312)
T 4ery_A 150 DPVSAVHFNRDGSLIVSSSYD--GLCRIWD 177 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETT--SCEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCC--CcEEEEE
Confidence 999999999999999998865 3444444
No 19
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.47 E-value=9.8e-13 Score=134.69 Aligned_cols=107 Identities=13% Similarity=0.116 Sum_probs=85.8
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeE-EeccC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS-WLKQH 80 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~-tl~gH 80 (574)
|++||++|++|+.|++|+|||+.+++++..+.+|.+.| .+++|++++..+|++|+.|++|+|||+........ ....|
T Consensus 135 ~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V-~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~ 213 (344)
T 4gqb_B 135 VLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQV-TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAP 213 (344)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCce-EEEEecCCCCCceeeeccccccccccccccceeeeeeccee
Confidence 89999999999999999999999999999999999888 78899999888899999999999999976443321 12456
Q ss_pred CCCeEEEEEcCC-CCEEEEEEecCCcCEEEec
Q 008196 81 SAPTAGISFSSD-DKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 81 ~~~VtSVaFSPD-G~~LaS~sWD~sg~viv~e 111 (574)
...+.+++|+|+ +.+|++++.| +.+.+++
T Consensus 214 ~~~~~~~~~~p~~~~~l~sg~~d--g~v~~wd 243 (344)
T 4gqb_B 214 GYLPTSLAWHPQQSEVFVFGDEN--GTVSLVD 243 (344)
T ss_dssp CCCEEEEEECSSCTTEEEEEETT--SEEEEEE
T ss_pred eccceeeeecCCCCcceEEeccC--CcEEEEE
Confidence 667999999985 4677777744 4444444
No 20
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.46 E-value=5.7e-13 Score=134.14 Aligned_cols=100 Identities=18% Similarity=0.281 Sum_probs=86.4
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCC--CCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPN--EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~--~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
|+|++++|++|+.|+.|+|||+.+++.+..+..+. ..+ .+++|+|+| .+|++|+.|+.|++||+... ..+..+.+
T Consensus 234 ~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v-~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~-~~~~~~~~ 310 (340)
T 1got_B 234 FFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI-TSVSFSKSG-RLLLAGYDDFNCNVWDALKA-DRAGVLAG 310 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCE-EEEEECTTS-SEEEEEETTSEEEEEETTTC-CEEEEEEC
T ss_pred EcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccce-EEEEECCCC-CEEEEECCCCeEEEEEcccC-cEeeEeec
Confidence 88999999999999999999999888877776332 234 788999998 66999999999999999763 35567899
Q ss_pred CCCCeEEEEEcCCCCEEEEEEecCC
Q 008196 80 HSAPTAGISFSSDDKAVSSLCWQRA 104 (574)
Q Consensus 80 H~~~VtSVaFSPDG~~LaS~sWD~s 104 (574)
|...|.+++|+|+|.+|+++++|..
T Consensus 311 h~~~v~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 311 HDNRVSCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSC
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCcc
Confidence 9999999999999999999997754
No 21
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.46 E-value=7.5e-13 Score=132.91 Aligned_cols=106 Identities=12% Similarity=0.129 Sum_probs=88.0
Q ss_pred ccC--CCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 2 YNC--KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 2 FSp--DG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
|+| ++++|++|+.||.|+|||+.+++.+..+..++...+.+++|+|++ .+|++|+.||.|+|||+.........+..
T Consensus 133 ~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg-~~lasg~~dg~i~iwd~~~~~~~~~~~~~ 211 (343)
T 3lrv_A 133 GHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDS-LLLALYSPDGILDVYNLSSPDQASSRFPV 211 (343)
T ss_dssp CCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTS-CEEEEECTTSCEEEEESSCTTSCCEECCC
T ss_pred cCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCCCCccEEec
Confidence 788 999999999999999999999998777766655445888999998 67999999999999999775544356777
Q ss_pred -CCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 80 -HSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 80 -H~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
|...|.+++|+|++.+|++++ +. .+.+++
T Consensus 212 ~h~~~v~~l~fs~~g~~l~s~~-~~--~v~iwd 241 (343)
T 3lrv_A 212 DEEAKIKEVKFADNGYWMVVEC-DQ--TVVCFD 241 (343)
T ss_dssp CTTSCEEEEEECTTSSEEEEEE-SS--BEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEe-CC--eEEEEE
Confidence 999999999999999999998 43 454554
No 22
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.45 E-value=1.6e-12 Score=130.77 Aligned_cols=105 Identities=12% Similarity=0.106 Sum_probs=87.5
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEe--cc
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL--KQ 79 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl--~g 79 (574)
|+|++++|++|+.|+.|+|||+.++.++..+.+|...+ .+|+|+|++ .+|++|+.|++|++||+...... ..+ ..
T Consensus 192 ~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v-~~v~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~-~~~~~~~ 268 (340)
T 1got_B 192 LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDI-NAICFFPNG-NAFATGSDDATCRLFDLRADQEL-MTYSHDN 268 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCE-EEEEECTTS-SEEEEEETTSCEEEEETTTTEEE-EEECCTT
T ss_pred ECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCE-EEEEEcCCC-CEEEEEcCCCcEEEEECCCCcEE-EEEccCC
Confidence 78999999999999999999999999999999988877 788999998 66999999999999999764322 233 23
Q ss_pred CCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 80 HSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 80 H~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
+...|.+++|+|+|.+|++++.| +.+.+++
T Consensus 269 ~~~~v~~~~~s~~g~~l~~g~~d--~~i~vwd 298 (340)
T 1got_B 269 IICGITSVSFSKSGRLLLAGYDD--FNCNVWD 298 (340)
T ss_dssp CCSCEEEEEECTTSSEEEEEETT--SEEEEEE
T ss_pred cccceEEEEECCCCCEEEEECCC--CeEEEEE
Confidence 44579999999999999998855 4454554
No 23
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.45 E-value=7e-13 Score=133.39 Aligned_cols=104 Identities=19% Similarity=0.232 Sum_probs=87.2
Q ss_pred cC-CCCEEEEEeCCCcEEEEECCCC-------ceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCcee
Q 008196 3 NC-KDEHLASISLSGDLILHNLASG-------AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (574)
Q Consensus 3 Sp-DG~~LASGS~DGtVrIWDl~Tg-------~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll 74 (574)
++ |+++|++|+.|++|+|||+..+ .....+.+|...| .+|+|+|++ .+|++|+.|++|+|||+... ..+
T Consensus 35 ~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V-~~~~~~~~~-~~l~s~s~D~~v~lwd~~~~-~~~ 111 (343)
T 2xzm_R 35 ENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFV-SDLALSQEN-CFAISSSWDKTLRLWDLRTG-TTY 111 (343)
T ss_dssp TTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCE-EEEEECSST-TEEEEEETTSEEEEEETTSS-CEE
T ss_pred cCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCce-EEEEECCCC-CEEEEEcCCCcEEEEECCCC-cEE
Confidence 44 8999999999999999999753 3466788888777 788999998 66999999999999999764 345
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 75 SWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 75 ~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..+.+|...|.+++|+|++.+|++++.| +.+.+++
T Consensus 112 ~~~~~h~~~v~~v~~sp~~~~l~s~~~d--~~i~~wd 146 (343)
T 2xzm_R 112 KRFVGHQSEVYSVAFSPDNRQILSAGAE--REIKLWN 146 (343)
T ss_dssp EEEECCCSCEEEEEECSSTTEEEEEETT--SCEEEEE
T ss_pred EEEcCCCCcEEEEEECCCCCEEEEEcCC--CEEEEEe
Confidence 6788999999999999999999998855 4455554
No 24
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.44 E-value=1.2e-12 Score=133.15 Aligned_cols=106 Identities=17% Similarity=0.254 Sum_probs=91.4
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCC-CeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNS-RHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdG-r~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
|++++++|++|+.|++|+|||+.+++++..+.+|...+ .+++|+|+. ..+|++|+.|++|++||+... ..+..+.+|
T Consensus 162 ~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v-~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~-~~~~~~~~h 239 (354)
T 2pbi_B 162 FTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADV-LCLDLAPSETGNTFVSGGCDKKAMVWDMRSG-QCVQAFETH 239 (354)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-EEEEECCCSSCCEEEEEETTSCEEEEETTTC-CEEEEECCC
T ss_pred EeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCe-EEEEEEeCCCCCEEEEEeCCCeEEEEECCCC-cEEEEecCC
Confidence 78899999999999999999999999999999998877 777998842 267999999999999999764 355678999
Q ss_pred CCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 81 SAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
...|.+++|+|++.+|+++++|. .+.+++
T Consensus 240 ~~~v~~v~~~p~~~~l~s~s~D~--~v~lwd 268 (354)
T 2pbi_B 240 ESDVNSVRYYPSGDAFASGSDDA--TCRLYD 268 (354)
T ss_dssp SSCEEEEEECTTSSEEEEEETTS--CEEEEE
T ss_pred CCCeEEEEEeCCCCEEEEEeCCC--eEEEEE
Confidence 99999999999999999998664 444444
No 25
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.44 E-value=3.3e-13 Score=134.80 Aligned_cols=101 Identities=13% Similarity=0.230 Sum_probs=85.6
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEEcc--CCCeEEEEEeCCCcEEEEeCCCCC-ceeEE
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGRS-PKVSW 76 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~--~l~t~~gh~~~Vvs~LafSP--dGr~LLaSgS~DGtVrLWDl~~~~-~ll~t 76 (574)
|+++|++||+|+.|++|+|||+.++. .+..+.+|.+.| .+|+|++ ++ .+|++|+.|++|+|||+.... .....
T Consensus 21 ~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V-~~v~~~~~~~~-~~l~s~s~D~~v~iWd~~~~~~~~~~~ 98 (316)
T 3bg1_A 21 MDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV-WQVAWAHPMYG-NILASCSYDRKVIIWREENGTWEKSHE 98 (316)
T ss_dssp ECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCE-EEEEECCGGGS-SCEEEEETTSCEEEECCSSSCCCEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccE-EEEEeCCCCCC-CEEEEEECCCEEEEEECCCCcceEEEE
Confidence 88999999999999999999998774 467888998888 7889986 35 569999999999999996532 34556
Q ss_pred eccCCCCeEEEEEcCC--CCEEEEEEecCC
Q 008196 77 LKQHSAPTAGISFSSD--DKAVSSLCWQRA 104 (574)
Q Consensus 77 l~gH~~~VtSVaFSPD--G~~LaS~sWD~s 104 (574)
+.+|...|.+++|+|+ +.+|++++.|..
T Consensus 99 ~~~h~~~V~~v~~~p~~~g~~lasgs~D~~ 128 (316)
T 3bg1_A 99 HAGHDSSVNSVCWAPHDYGLILACGSSDGA 128 (316)
T ss_dssp ECCCSSCCCEEEECCTTTCSCEEEECSSSC
T ss_pred ccCCCCceEEEEECCCCCCcEEEEEcCCCC
Confidence 7899999999999998 789999887654
No 26
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.44 E-value=3.9e-12 Score=127.10 Aligned_cols=98 Identities=15% Similarity=0.263 Sum_probs=87.0
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|+++|++|++|+.|++|+|||+.+++.+..+.+|...+ .+|+|+|++ .+|++|+.|++|++||+.+. .+..+.+|.
T Consensus 73 ~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v-~~~~~~~~~-~~l~s~s~D~~i~vwd~~~~--~~~~~~~h~ 148 (319)
T 3frx_A 73 LTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDV-MSVDIDKKA-SMIISGSRDKTIKVWTIKGQ--CLATLLGHN 148 (319)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-EEEEECTTS-CEEEEEETTSCEEEEETTSC--EEEEECCCS
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcE-EEEEEcCCC-CEEEEEeCCCeEEEEECCCC--eEEEEeccC
Confidence 78999999999999999999999999999999998888 778999998 66999999999999999764 455788999
Q ss_pred CCeEEEEEcCC------CCEEEEEEecC
Q 008196 82 APTAGISFSSD------DKAVSSLCWQR 103 (574)
Q Consensus 82 ~~VtSVaFSPD------G~~LaS~sWD~ 103 (574)
..|.+++|+|. +..|++++.|.
T Consensus 149 ~~v~~~~~~~~~~~~~~~~~l~s~~~d~ 176 (319)
T 3frx_A 149 DWVSQVRVVPNEKADDDSVTIISAGNDK 176 (319)
T ss_dssp SCEEEEEECCC------CCEEEEEETTS
T ss_pred CcEEEEEEccCCCCCCCccEEEEEeCCC
Confidence 99999999985 45788887553
No 27
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.44 E-value=6.1e-13 Score=136.22 Aligned_cols=106 Identities=19% Similarity=0.293 Sum_probs=87.3
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCC------CeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeE
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNE------QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~------~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~ 75 (574)
|+|+|++|++|+.|++|+|||+.++..+..+..+.. ..+.+++|+|+| .+|++|+.||.|++||+..... +.
T Consensus 257 ~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~dg~i~vwd~~~~~~-~~ 334 (380)
T 3iz6_a 257 FFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISG-RLLFAGYSNGDCYVWDTLLAEM-VL 334 (380)
T ss_dssp ECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSS-SEEEEECTTSCEEEEETTTCCE-EE
T ss_pred EecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCC-CEEEEEECCCCEEEEECCCCce-EE
Confidence 899999999999999999999999999888875432 134778999998 6699999999999999966433 22
Q ss_pred Ee----ccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 76 WL----KQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 76 tl----~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.+ .+|...|++++|+|+|.+|+++++|. .+.+|+
T Consensus 335 ~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~--~i~iW~ 372 (380)
T 3iz6_a 335 NLGTLQNSHEGRISCLGLSSDGSALCTGSWDK--NLKIWA 372 (380)
T ss_dssp EECCSCSSCCCCCCEEEECSSSSEEEEECTTS--CEEEEE
T ss_pred EEecccCCCCCceEEEEECCCCCEEEEeeCCC--CEEEEe
Confidence 33 68999999999999999999999775 444443
No 28
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.43 E-value=2.4e-12 Score=131.57 Aligned_cols=106 Identities=21% Similarity=0.364 Sum_probs=91.0
Q ss_pred ccC-CCCEEEEEeCCCcEEEEECCCC-------ceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCce
Q 008196 2 YNC-KDEHLASISLSGDLILHNLASG-------AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK 73 (574)
Q Consensus 2 FSp-DG~~LASGS~DGtVrIWDl~Tg-------~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~l 73 (574)
|++ ++++|++|+.||.|+|||+.++ ..+..+.+|...+ .+|+|+|++..+|++|+.|+.|++||+... ..
T Consensus 89 ~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v-~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-~~ 166 (402)
T 2aq5_A 89 WCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRV-GIVAWHPTAQNVLLSAGCDNVILVWDVGTG-AA 166 (402)
T ss_dssp ECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCE-EEEEECSSBTTEEEEEETTSCEEEEETTTT-EE
T ss_pred eCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeE-EEEEECcCCCCEEEEEcCCCEEEEEECCCC-Cc
Confidence 788 8999999999999999999887 5678888888777 888999998668999999999999999774 34
Q ss_pred eEEe--ccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 74 VSWL--KQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 74 l~tl--~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
+..+ .+|...|.+++|+|++.+|++++.| +.+.+++
T Consensus 167 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iwd 204 (402)
T 2aq5_A 167 VLTLGPDVHPDTIYSVDWSRDGALICTSCRD--KRVRVIE 204 (402)
T ss_dssp EEEECTTTCCSCEEEEEECTTSSCEEEEETT--SEEEEEE
T ss_pred cEEEecCCCCCceEEEEECCCCCEEEEEecC--CcEEEEe
Confidence 4566 7899999999999999999998855 4555554
No 29
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.43 E-value=2e-12 Score=129.26 Aligned_cols=105 Identities=17% Similarity=0.204 Sum_probs=87.6
Q ss_pred ccCCC-CEEEEEeCCCcEEEEECCC-----CceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeE
Q 008196 2 YNCKD-EHLASISLSGDLILHNLAS-----GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (574)
Q Consensus 2 FSpDG-~~LASGS~DGtVrIWDl~T-----g~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~ 75 (574)
|++++ ++|++|+.|++|+|||+.. +..+..+.+|...+ .+++|+|++ .+|++|+.|++|+|||+... ..+.
T Consensus 25 ~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v-~~~~~s~dg-~~l~s~s~D~~v~~wd~~~~-~~~~ 101 (319)
T 3frx_A 25 TSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIV-QDCTLTADG-AYALSASWDKTLRLWDVATG-ETYQ 101 (319)
T ss_dssp ECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCE-EEEEECTTS-SEEEEEETTSEEEEEETTTT-EEEE
T ss_pred ccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccE-EEEEECCCC-CEEEEEeCCCEEEEEECCCC-CeeE
Confidence 67755 8999999999999999854 33467888888887 777999998 56999999999999999774 4556
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 76 WLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 76 tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.+.+|...|.+++|+|++.+|+++++|. .+.+++
T Consensus 102 ~~~~h~~~v~~~~~~~~~~~l~s~s~D~--~i~vwd 135 (319)
T 3frx_A 102 RFVGHKSDVMSVDIDKKASMIISGSRDK--TIKVWT 135 (319)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEETTS--CEEEEE
T ss_pred EEccCCCcEEEEEEcCCCCEEEEEeCCC--eEEEEE
Confidence 7899999999999999999999998664 444444
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.43 E-value=1.1e-12 Score=131.67 Aligned_cols=101 Identities=15% Similarity=0.155 Sum_probs=85.4
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCC----CceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCC-CceeEE
Q 008196 2 YNCKDEHLASISLSGDLILHNLAS----GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR-SPKVSW 76 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~T----g~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~-~~ll~t 76 (574)
|+|+|++||+|+.|+.|+|||+.. .+++..+.+|...+ .+|+|+|++ .+|++|+.|++|+|||+... ...+..
T Consensus 115 ~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v-~~v~~~p~~-~~l~s~s~D~~i~iW~~~~~~~~~~~~ 192 (330)
T 2hes_X 115 WSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDV-KHVIWHPSE-ALLASSSYDDTVRIWKDYDDDWECVAV 192 (330)
T ss_dssp ECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCE-EEEEECSSS-SEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCce-EEEEECCCC-CEEEEEcCCCeEEEEECCCCCeeEEEE
Confidence 899999999999999999999943 24577888888777 788999998 66999999999999998542 234567
Q ss_pred eccCCCCeEEEEEcCC--CCEEEEEEecCC
Q 008196 77 LKQHSAPTAGISFSSD--DKAVSSLCWQRA 104 (574)
Q Consensus 77 l~gH~~~VtSVaFSPD--G~~LaS~sWD~s 104 (574)
+.+|...|++++|+|+ +.+|++++.|..
T Consensus 193 ~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~ 222 (330)
T 2hes_X 193 LNGHEGTVWSSDFDKTEGVFRLCSGSDDST 222 (330)
T ss_dssp ECCCSSCEEEEEECCSSSSCEEEEEETTSC
T ss_pred ccCCCCcEEEEEecCCCCeeEEEEEeCCCe
Confidence 8999999999999998 678999886644
No 31
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.43 E-value=5.6e-13 Score=147.16 Aligned_cols=105 Identities=18% Similarity=0.276 Sum_probs=87.4
Q ss_pred ccCC-CCEEEEEeCCCcEEEEECCCC-----ceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeE
Q 008196 2 YNCK-DEHLASISLSGDLILHNLASG-----AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (574)
Q Consensus 2 FSpD-G~~LASGS~DGtVrIWDl~Tg-----~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~ 75 (574)
|+++ +++|++|+.|++|+|||+.+. .....+.+|...| .+|+|+|++ .+|++|+.|++|+|||+... ....
T Consensus 390 ~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v-~~v~~s~~g-~~l~sgs~Dg~v~vwd~~~~-~~~~ 466 (694)
T 3dm0_A 390 TPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFV-EDVVLSSDG-QFALSGSWDGELRLWDLAAG-VSTR 466 (694)
T ss_dssp CCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCE-EEEEECTTS-SEEEEEETTSEEEEEETTTT-EEEE
T ss_pred ecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcE-EEEEECCCC-CEEEEEeCCCcEEEEECCCC-ccee
Confidence 5665 479999999999999999753 3456788888877 788999998 66999999999999999763 4556
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 76 WLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 76 tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.+.+|...|.+++|+|++.+|++++.| +.+.+++
T Consensus 467 ~~~~h~~~v~~~~~s~~~~~l~s~s~D--~~i~iwd 500 (694)
T 3dm0_A 467 RFVGHTKDVLSVAFSLDNRQIVSASRD--RTIKLWN 500 (694)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEETT--SCEEEEC
T ss_pred EEeCCCCCEEEEEEeCCCCEEEEEeCC--CEEEEEE
Confidence 788999999999999999999999865 4454554
No 32
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.42 E-value=3.4e-12 Score=128.35 Aligned_cols=100 Identities=18% Similarity=0.285 Sum_probs=85.1
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCcee-EEeccC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV-SWLKQH 80 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll-~tl~gH 80 (574)
|++++.+|++|+.|++|+|||+.+++.+..+.+|...+ .+|+|+|++ .+|++|+.|++|++||+.+..... ....+|
T Consensus 84 ~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v-~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~ 161 (343)
T 2xzm_R 84 LSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEV-YSVAFSPDN-RQILSAGAEREIKLWNILGECKFSSAEKENH 161 (343)
T ss_dssp ECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCE-EEEEECSST-TEEEEEETTSCEEEEESSSCEEEECCTTTSC
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcE-EEEEECCCC-CEEEEEcCCCEEEEEeccCCceeeeecccCC
Confidence 78999999999999999999999999999999998888 788999998 559999999999999997532211 112378
Q ss_pred CCCeEEEEEcCCC----------CEEEEEEecC
Q 008196 81 SAPTAGISFSSDD----------KAVSSLCWQR 103 (574)
Q Consensus 81 ~~~VtSVaFSPDG----------~~LaS~sWD~ 103 (574)
...|.+++|+|++ .+|+++++|.
T Consensus 162 ~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 194 (343)
T 2xzm_R 162 SDWVSCVRYSPIMKSANKVQPFAPYFASVGWDG 194 (343)
T ss_dssp SSCEEEEEECCCCCSCSCCCSSCCEEEEEETTS
T ss_pred CceeeeeeeccccccccccCCCCCEEEEEcCCC
Confidence 9999999999987 6899988764
No 33
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.42 E-value=1.3e-12 Score=132.52 Aligned_cols=105 Identities=14% Similarity=0.167 Sum_probs=90.9
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|++++++|++|+.|+.|+|||+.+++.+..+.+|.+.+ .+|+|+|++ .+|++|+.|++|++||+.... .+..+.+|.
T Consensus 105 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~-~~~~~~~h~ 181 (420)
T 3vl1_A 105 AKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEI-TKLKFFPSG-EALISSSQDMQLKIWSVKDGS-NPRTLIGHR 181 (420)
T ss_dssp ECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCE-EEEEECTTS-SEEEEEETTSEEEEEETTTCC-CCEEEECCS
T ss_pred EecCCCEEEEEECCCCEEEEeCCCcceeeecccccCcc-EEEEECCCC-CEEEEEeCCCeEEEEeCCCCc-CceEEcCCC
Confidence 78999999999999999999999998888888888777 888999998 569999999999999997643 345778999
Q ss_pred CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..|.+++|+|++.+|++++.| +.+.+++
T Consensus 182 ~~v~~~~~~~~~~~l~s~~~d--~~v~iwd 209 (420)
T 3vl1_A 182 ATVTDIAIIDRGRNVLSASLD--GTIRLWE 209 (420)
T ss_dssp SCEEEEEEETTTTEEEEEETT--SCEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEcCC--CcEEEeE
Confidence 999999999999999998865 4454454
No 34
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.42 E-value=1.6e-12 Score=132.24 Aligned_cols=101 Identities=24% Similarity=0.285 Sum_probs=86.1
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCC-CCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPN-EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~-~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
|+|++++|++|+.|++|+|||+..+..+..+..+. ...+.+++|+|++ .+|++|+.|++|++||+... ..+..+.+|
T Consensus 248 ~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~-~~~~~l~~h 325 (354)
T 2pbi_B 248 YYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSG-RLLFAGYNDYTINVWDVLKG-SRVSILFGH 325 (354)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEETTTC-SEEEEECCC
T ss_pred EeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCC-CEEEEEECCCcEEEEECCCC-ceEEEEECC
Confidence 78999999999999999999999888777776443 2233778999998 66999999999999999663 345678899
Q ss_pred CCCeEEEEEcCCCCEEEEEEecCC
Q 008196 81 SAPTAGISFSSDDKAVSSLCWQRA 104 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~LaS~sWD~s 104 (574)
...|++++|+|||.+|+++++|..
T Consensus 326 ~~~v~~l~~spdg~~l~sgs~D~~ 349 (354)
T 2pbi_B 326 ENRVSTLRVSPDGTAFCSGSWDHT 349 (354)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSE
T ss_pred CCcEEEEEECCCCCEEEEEcCCCC
Confidence 999999999999999999997753
No 35
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.41 E-value=1.7e-12 Score=125.05 Aligned_cols=106 Identities=14% Similarity=0.280 Sum_probs=88.0
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCC----ceeEEecCCCCCeEEEEEEcc--CCCeEEEEEeCCCcEEEEeCCCCC----
Q 008196 2 YNCKDEHLASISLSGDLILHNLASG----AKAAELKDPNEQVLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGRS---- 71 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg----~~l~t~~gh~~~Vvs~LafSP--dGr~LLaSgS~DGtVrLWDl~~~~---- 71 (574)
|++++++||+|+.||.|+|||+.++ ..+..+.+|...+ .+|+|+| ++ .+|++|+.||.|++||+....
T Consensus 19 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~d~-~~l~s~~~dg~v~vwd~~~~~~~~~ 96 (351)
T 3f3f_A 19 YDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSI-VAIDWASPEYG-RIIASASYDKTVKLWEEDPDQEECS 96 (351)
T ss_dssp ECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCE-EEEEECCGGGC-SEEEEEETTSCEEEEEECTTSCTTS
T ss_pred EcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcE-EEEEEcCCCCC-CEEEEEcCCCeEEEEecCCCccccc
Confidence 8999999999999999999999876 3566777888777 8889999 56 679999999999999996532
Q ss_pred ----ceeEEeccCCCCeEEEEEcCC--CCEEEEEEecCCcCEEEec
Q 008196 72 ----PKVSWLKQHSAPTAGISFSSD--DKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 72 ----~ll~tl~gH~~~VtSVaFSPD--G~~LaS~sWD~sg~viv~e 111 (574)
..+..+.+|...|.+++|+|+ +.+|++++.| +.+.+++
T Consensus 97 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--g~v~iwd 140 (351)
T 3f3f_A 97 GRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND--GILRLYD 140 (351)
T ss_dssp SCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--CEEEEEE
T ss_pred ccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC--CcEEEec
Confidence 335667899999999999999 9999998754 4444444
No 36
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.40 E-value=2.7e-12 Score=126.73 Aligned_cols=103 Identities=15% Similarity=0.152 Sum_probs=83.0
Q ss_pred CCEEEEEeCCCcEEEEECCCCc----eeEEecCCCCCeEEEEEEccCC--CeEEEEEeCCCcEEEEeCCCCC--ceeEEe
Q 008196 6 DEHLASISLSGDLILHNLASGA----KAAELKDPNEQVLRVLDYSRNS--RHLLVTAGDDGTLHLWDTTGRS--PKVSWL 77 (574)
Q Consensus 6 G~~LASGS~DGtVrIWDl~Tg~----~l~t~~gh~~~Vvs~LafSPdG--r~LLaSgS~DGtVrLWDl~~~~--~ll~tl 77 (574)
+++||+|+.|+.|+|||+.++. .+..+.+|...| .+|+|+|++ ..+|++|+.|++|+|||+.... .....+
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V-~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~ 248 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV-RDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLL 248 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE-EEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEES
T ss_pred cceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCce-EEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeee
Confidence 6799999999999999998776 567888888877 788999985 4779999999999999996532 122233
Q ss_pred --ccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 78 --KQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 78 --~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.+|...|++++|+|++.+|++++.|. .+.++.
T Consensus 249 ~~~~~~~~v~~~~~s~~g~~las~~~D~--~v~lw~ 282 (297)
T 2pm7_B 249 KEEKFPDVLWRASWSLSGNVLALSGGDN--KVTLWK 282 (297)
T ss_dssp SSSCCSSCEEEEEECSSSCCEEEEETTS--CEEEEE
T ss_pred ecccCCCcEEEEEECCCCCEEEEEcCCC--cEEEEE
Confidence 57888999999999999999998664 444444
No 37
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.39 E-value=1.3e-12 Score=137.46 Aligned_cols=101 Identities=15% Similarity=0.122 Sum_probs=75.9
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEecCCCCC--eEEEEEEccCCCe-------------------------------
Q 008196 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQ--VLRVLDYSRNSRH------------------------------- 51 (574)
Q Consensus 5 DG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~--Vvs~LafSPdGr~------------------------------- 51 (574)
++.+|++|+.|++|+|||+.+|+++.++.+|+.. .+.+++|+|+|..
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 6688999999999999999999999999876532 2244456655421
Q ss_pred -------------------------EEEEEeCCCcEEEEeCCCCCceeEEeccCCCCeE-EEEEcCCCCEEEEEEecCCc
Q 008196 52 -------------------------LLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTA-GISFSSDDKAVSSLCWQRAK 105 (574)
Q Consensus 52 -------------------------LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~~~Vt-SVaFSPDG~~LaS~sWD~sg 105 (574)
++++++.|++|+|||+.+. ..+.++.+|...+. +++|+|||++|+++++|+..
T Consensus 272 ~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tG-k~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TI 350 (356)
T 2w18_A 272 SVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLG-QCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNI 350 (356)
T ss_dssp EEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTC-SEEEEECCC--CCCCEEEECSSSSEEEEECTTSCE
T ss_pred EEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCC-cEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcE
Confidence 3577788999999999774 45667888987655 68999999999999977544
Q ss_pred C
Q 008196 106 P 106 (574)
Q Consensus 106 ~ 106 (574)
+
T Consensus 351 k 351 (356)
T 2w18_A 351 F 351 (356)
T ss_dssp E
T ss_pred E
Confidence 3
No 38
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.38 E-value=2.8e-12 Score=140.13 Aligned_cols=99 Identities=17% Similarity=0.296 Sum_probs=86.3
Q ss_pred ccCCCC-EEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEec--
Q 008196 2 YNCKDE-HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-- 78 (574)
Q Consensus 2 FSpDG~-~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~-- 78 (574)
|+|++. +|++|+.|++|+|||..+++++..+.+|...| .+|+|+|+| .+|++|+.|++|+|||+.... .+..+.
T Consensus 155 f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V-~~v~fspdg-~~las~s~D~~i~lwd~~~g~-~~~~~~~~ 231 (611)
T 1nr0_A 155 FKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFV-HSVRYNPDG-SLFASTGGDGTIVLYNGVDGT-KTGVFEDD 231 (611)
T ss_dssp ECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCE-EEEEECTTS-SEEEEEETTSCEEEEETTTCC-EEEECBCT
T ss_pred ECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCce-EEEEECCCC-CEEEEEECCCcEEEEECCCCc-Eeeeeccc
Confidence 789887 69999999999999999999999999998877 788999998 669999999999999986543 333442
Q ss_pred -----cCCCCeEEEEEcCCCCEEEEEEecC
Q 008196 79 -----QHSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 79 -----gH~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
+|...|.+++|+|++++|++++.|.
T Consensus 232 ~~~~~~h~~~V~~v~~spdg~~l~s~s~D~ 261 (611)
T 1nr0_A 232 SLKNVAHSGSVFGLTWSPDGTKIASASADK 261 (611)
T ss_dssp TSSSCSSSSCEEEEEECTTSSEEEEEETTS
T ss_pred cccccccCCCEEEEEECCCCCEEEEEeCCC
Confidence 7999999999999999999988664
No 39
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.36 E-value=1.4e-11 Score=126.75 Aligned_cols=106 Identities=14% Similarity=0.184 Sum_probs=86.1
Q ss_pred ccC-CCCEEEEEeCCCcEEEEECCCCceeEEe-------cCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCC---
Q 008196 2 YNC-KDEHLASISLSGDLILHNLASGAKAAEL-------KDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR--- 70 (574)
Q Consensus 2 FSp-DG~~LASGS~DGtVrIWDl~Tg~~l~t~-------~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~--- 70 (574)
|++ +|++|++|+.|+.|+|||+.++..+..+ .+|...+ .+|+|+|++ .+|++|+.|++|++||+...
T Consensus 214 ~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v-~~v~~~~~g-~~l~s~s~d~~v~~wd~~~~~~~ 291 (393)
T 1erj_A 214 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSV-YSVVFTRDG-QSVVSGSLDRSVKLWNLQNANNK 291 (393)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCE-EEEEECTTS-SEEEEEETTSEEEEEEC------
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCE-EEEEECCCC-CEEEEEeCCCEEEEEECCCCCCc
Confidence 667 8999999999999999999999888777 4566666 788999998 56999999999999999532
Q ss_pred --------CceeEEeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 71 --------SPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 71 --------~~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
......+.+|...|.+++|++++.+|++++.| +.+.+++
T Consensus 292 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D--~~v~iwd 338 (393)
T 1erj_A 292 SDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD--RGVLFWD 338 (393)
T ss_dssp ---------CEEEEEECCSSCEEEEEECGGGCEEEEEETT--SEEEEEE
T ss_pred ccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCC--CeEEEEE
Confidence 12344678999999999999999999999855 4455554
No 40
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.36 E-value=5.6e-12 Score=123.90 Aligned_cols=105 Identities=13% Similarity=0.198 Sum_probs=89.0
Q ss_pred ccCC----CCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEcc-CCCeEEEEEeCCCcEEEEeCCCCCceeEE
Q 008196 2 YNCK----DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (574)
Q Consensus 2 FSpD----G~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSP-dGr~LLaSgS~DGtVrLWDl~~~~~ll~t 76 (574)
|+++ |++|++|+.||.|+|||+.+++.+..+.+|...+ .+|+|+| ++ .+|++|+.||.|++||+.... .+..
T Consensus 77 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~-~~~~ 153 (366)
T 3k26_A 77 WTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAI-NELKFHPRDP-NLLLSVSKDHALRLWNIQTDT-LVAI 153 (366)
T ss_dssp EEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCE-EEEEECSSCT-TEEEEEETTSCEEEEETTTTE-EEEE
T ss_pred eccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcE-EEEEECCCCC-CEEEEEeCCCeEEEEEeecCe-EEEE
Confidence 5666 7799999999999999999999999999888877 8889999 66 679999999999999997643 3444
Q ss_pred e---ccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 77 L---KQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 77 l---~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
+ .+|...|.+++|+|++.+|++++.| +.+.+++
T Consensus 154 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~i~d 189 (366)
T 3k26_A 154 FGGVEGHRDEVLSADYDLLGEKIMSCGMD--HSLKLWR 189 (366)
T ss_dssp ECSTTSCSSCEEEEEECTTSSEEEEEETT--SCEEEEE
T ss_pred ecccccccCceeEEEECCCCCEEEEecCC--CCEEEEE
Confidence 5 6899999999999999999999855 4555554
No 41
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.36 E-value=1.3e-12 Score=130.89 Aligned_cols=106 Identities=11% Similarity=0.188 Sum_probs=86.7
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCC--ceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCC--ceeEEe
Q 008196 2 YNCKDEHLASISLSGDLILHNLASG--AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS--PKVSWL 77 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg--~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~--~ll~tl 77 (574)
|+++|++||+|+.|+.|+|||+.++ +.+..+.+|.+.+ .+|+|+|++ .+|++++.|++|++||+.... .....+
T Consensus 19 ~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v-~~~~~s~~~-~~l~s~s~d~~v~vwd~~~~~~~~~~~~~ 96 (377)
T 3dwl_C 19 FNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIV-TCVDWAPKS-NRIVTCSQDRNAYVYEKRPDGTWKQTLVL 96 (377)
T ss_dssp ECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCE-EEEEECTTT-CCEEEEETTSSEEEC------CCCCEEEC
T ss_pred ECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceE-EEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCceeeeeEe
Confidence 8999999999999999999999888 6788888888877 788999998 559999999999999996543 234567
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 78 KQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 78 ~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.+|...|.+++|+|++.+|++++.| +.+.+++
T Consensus 97 ~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iwd 128 (377)
T 3dwl_C 97 LRLNRAATFVRWSPNEDKFAVGSGA--RVISVCY 128 (377)
T ss_dssp CCCSSCEEEEECCTTSSCCEEEESS--SCEEECC
T ss_pred cccCCceEEEEECCCCCEEEEEecC--CeEEEEE
Confidence 8899999999999999999998865 4455554
No 42
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.36 E-value=3.8e-12 Score=134.69 Aligned_cols=105 Identities=10% Similarity=0.134 Sum_probs=91.3
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecC-CCCCeEEEEEEcc----------CCCeEEEEEeCCCcEEEEeCCCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD-PNEQVLRVLDYSR----------NSRHLLVTAGDDGTLHLWDTTGR 70 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~g-h~~~Vvs~LafSP----------dGr~LLaSgS~DGtVrLWDl~~~ 70 (574)
|+++|++|++|+.|+.|+|||+.+++.+..+.+ |...+ .+|+|+| ++ .+|++|+.|+.|++||+...
T Consensus 496 ~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v-~~~~~sp~~~~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 496 ISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKI-NAISWKPAEKGANEEEIEE-DLVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCE-EEEEECCCC------CCSC-CEEEEEETTSCEEEEESSCT
T ss_pred ECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCce-eEEEEcCccccccccccCC-CEEEEEcCCCcEEEEECCCC
Confidence 899999999999999999999999999998887 76666 8889999 87 66999999999999999775
Q ss_pred CceeEEeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 71 SPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 71 ~~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
...+..+.+|...|++++|+|++. |++++.| +.+.+|+
T Consensus 574 ~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d--~~v~iw~ 611 (615)
T 1pgu_A 574 MKIIKALNAHKDGVNNLLWETPST-LVSSGAD--ACIKRWN 611 (615)
T ss_dssp TCCEEETTSSTTCEEEEEEEETTE-EEEEETT--SCEEEEE
T ss_pred ceechhhhcCccceEEEEEcCCCC-eEEecCC--ceEEEEe
Confidence 456667899999999999999999 9998855 4454444
No 43
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.36 E-value=7.3e-12 Score=128.77 Aligned_cols=98 Identities=17% Similarity=0.238 Sum_probs=84.5
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|++||++||+|+.|+.|+|||+.+++.+..+.+|...+ .+|+|+|++ .+|++|+.|++|++||+..... ...+ .|.
T Consensus 131 ~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v-~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~~-~~~~-~~~ 206 (393)
T 1erj_A 131 FSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDI-YSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQC-SLTL-SIE 206 (393)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-EEEEECTTS-SEEEEEETTSEEEEEETTTTEE-EEEE-ECS
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCE-EEEEEcCCC-CEEEEecCCCcEEEEECCCCee-EEEE-EcC
Confidence 89999999999999999999999999999999998888 788999998 5599999999999999976432 2233 356
Q ss_pred CCeEEEEEcC-CCCEEEEEEecC
Q 008196 82 APTAGISFSS-DDKAVSSLCWQR 103 (574)
Q Consensus 82 ~~VtSVaFSP-DG~~LaS~sWD~ 103 (574)
..|.+++|+| ++.+|++++.|.
T Consensus 207 ~~v~~~~~~~~~~~~l~~~s~d~ 229 (393)
T 1erj_A 207 DGVTTVAVSPGDGKYIAAGSLDR 229 (393)
T ss_dssp SCEEEEEECSTTCCEEEEEETTS
T ss_pred CCcEEEEEECCCCCEEEEEcCCC
Confidence 6899999999 899999988654
No 44
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.36 E-value=1.4e-12 Score=135.63 Aligned_cols=106 Identities=18% Similarity=0.253 Sum_probs=88.6
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCc--eeEEecc
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP--KVSWLKQ 79 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~--ll~tl~g 79 (574)
|++++++|++|+.||.|+|||+ .++.+..+.+|...| .+|+|+|+++.+|++|+.|++|+|||+..... .+....+
T Consensus 217 ~~~~~~~l~~g~~dg~i~~wd~-~~~~~~~~~~h~~~v-~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~ 294 (435)
T 4e54_B 217 VSASSRMVVTGDNVGNVILLNM-DGKELWNLRMHKKKV-THVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLP 294 (435)
T ss_dssp EETTTTEEEEECSSSBEEEEES-SSCBCCCSBCCSSCE-EEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCB
T ss_pred ECCCCCEEEEEeCCCcEeeecc-CcceeEEEecccceE-EeeeecCCCceEEEEecCcceeeEEecccccccceEEEeee
Confidence 7899999999999999999999 466778888888887 78899999988899999999999999954322 2234568
Q ss_pred CCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 80 HSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 80 H~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
|...|++|+|+|+|.+|++++.| +.+.+++
T Consensus 295 h~~~v~~~~~spdg~~l~s~~~D--~~i~iwd 324 (435)
T 4e54_B 295 HRHPVNAACFSPDGARLLTTDQK--SEIRVYS 324 (435)
T ss_dssp CSSCEEECCBCTTSSEEEEEESS--SCEEEEE
T ss_pred ccccccceeECCCCCeeEEEcCC--CEEEEEE
Confidence 99999999999999999999866 4444444
No 45
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.35 E-value=1.1e-11 Score=121.56 Aligned_cols=97 Identities=20% Similarity=0.246 Sum_probs=85.6
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|+++|++|++|+.||.|+|||+.+++.+..+.+|...+ .+++|+|++ .+|++++.|+.|++||+..... +..+. |.
T Consensus 40 ~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v-~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~-~~~~~-~~ 115 (369)
T 3zwl_B 40 YNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTI-WSIDVDCFT-KYCVTGSADYSIKLWDVSNGQC-VATWK-SP 115 (369)
T ss_dssp ECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCE-EEEEECTTS-SEEEEEETTTEEEEEETTTCCE-EEEEE-CS
T ss_pred EcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcE-EEEEEcCCC-CEEEEEeCCCeEEEEECCCCcE-EEEee-cC
Confidence 89999999999999999999999999999999888887 788999998 5699999999999999976433 33444 88
Q ss_pred CCeEEEEEcCCCCEEEEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD 102 (574)
..|.+++|+|++.+|++++.+
T Consensus 116 ~~v~~~~~~~~~~~l~~~~~~ 136 (369)
T 3zwl_B 116 VPVKRVEFSPCGNYFLAILDN 136 (369)
T ss_dssp SCEEEEEECTTSSEEEEEECC
T ss_pred CCeEEEEEccCCCEEEEecCC
Confidence 899999999999999998755
No 46
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.35 E-value=1e-11 Score=126.69 Aligned_cols=107 Identities=12% Similarity=0.159 Sum_probs=88.0
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCce-eEEeccC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK-VSWLKQH 80 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~l-l~tl~gH 80 (574)
|+|+|++|++|+.|+.|+|||+.+++++..+.+|...+ .+|+|+++++.++++++.|++|+|||+...... ...+..|
T Consensus 147 ~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v-~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~ 225 (357)
T 4g56_B 147 VFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEV-NCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCAS 225 (357)
T ss_dssp ECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-EEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTC
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCE-EEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccc
Confidence 89999999999999999999999999999999988887 888999998778999999999999999654332 2234567
Q ss_pred CCCeEEEEEcCCC-CEEEEEEecCCcCEEEec
Q 008196 81 SAPTAGISFSSDD-KAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 81 ~~~VtSVaFSPDG-~~LaS~sWD~sg~viv~e 111 (574)
...|.+++|+|++ .+|++++.| +.+.+++
T Consensus 226 ~~~v~~v~~sp~~~~~la~g~~d--~~i~~wd 255 (357)
T 4g56_B 226 DTIPTSVTWHPEKDDTFACGDET--GNVSLVN 255 (357)
T ss_dssp CSCEEEEEECTTSTTEEEEEESS--SCEEEEE
T ss_pred cccccchhhhhcccceEEEeecc--cceeEEE
Confidence 7889999999985 567777644 4444444
No 47
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.35 E-value=7.6e-12 Score=123.53 Aligned_cols=106 Identities=14% Similarity=0.237 Sum_probs=88.6
Q ss_pred ccCCCCEEEEEeCCCcEEEEECC--CCceeEEecCCCCCeEEEEEEccC--CCeEEEEEeCCCcEEEEeCCCCC-ceeEE
Q 008196 2 YNCKDEHLASISLSGDLILHNLA--SGAKAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PKVSW 76 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~--Tg~~l~t~~gh~~~Vvs~LafSPd--Gr~LLaSgS~DGtVrLWDl~~~~-~ll~t 76 (574)
|++++++||+|+.||.|+|||+. ++..+..+.+|...+ .+|+|+++ + .+|++|+.||.|++||+.... ..+..
T Consensus 19 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~ 96 (379)
T 3jrp_A 19 LDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPV-WRVDWAHPKFG-TILASCSYDGKVLIWKEENGRWSQIAV 96 (379)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE-EEEEECCGGGC-SEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred EcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcE-EEEEeCCCCCC-CEEEEeccCCEEEEEEcCCCceeEeee
Confidence 89999999999999999999997 556678888888777 88899876 6 669999999999999996643 24556
Q ss_pred eccCCCCeEEEEEcCC--CCEEEEEEecCCcCEEEec
Q 008196 77 LKQHSAPTAGISFSSD--DKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 77 l~gH~~~VtSVaFSPD--G~~LaS~sWD~sg~viv~e 111 (574)
+..|...|.+++|+|+ +.+|++++.| +.+.+++
T Consensus 97 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d--~~i~v~d 131 (379)
T 3jrp_A 97 HAVHSASVNSVQWAPHEYGPLLLVASSD--GKVSVVE 131 (379)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETT--SEEEEEE
T ss_pred ecCCCcceEEEEeCCCCCCCEEEEecCC--CcEEEEe
Confidence 7889999999999999 9999998855 4444444
No 48
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.34 E-value=2.3e-12 Score=129.13 Aligned_cols=106 Identities=8% Similarity=0.147 Sum_probs=81.2
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCc---eeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCc--eeEE
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP--KVSW 76 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~---~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~--ll~t 76 (574)
|++++++|++|+.|+.|+|||+.++. ....+.+|...+ .+++|+|++ .+|++|+.|+.|++||+..... ....
T Consensus 63 ~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 140 (377)
T 3dwl_C 63 WAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAA-TFVRWSPNE-DKFAVGSGARVISVCYFEQENDWWVSKH 140 (377)
T ss_dssp ECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCE-EEEECCTTS-SCCEEEESSSCEEECCC-----CCCCEE
T ss_pred EeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCce-EEEEECCCC-CEEEEEecCCeEEEEEECCcccceeeeE
Confidence 88999999999999999999998877 567777787777 888999998 5599999999999999966432 3455
Q ss_pred ecc-CCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 77 LKQ-HSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 77 l~g-H~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
+.+ |...|.+++|+|++.+|++++.| +.+.+++
T Consensus 141 ~~~~h~~~v~~~~~~~~~~~l~~~~~d--~~i~iwd 174 (377)
T 3dwl_C 141 LKRPLRSTILSLDWHPNNVLLAAGCAD--RKAYVLS 174 (377)
T ss_dssp ECSSCCSCEEEEEECTTSSEEEEEESS--SCEEEEE
T ss_pred eecccCCCeEEEEEcCCCCEEEEEeCC--CEEEEEE
Confidence 666 99999999999999999999866 4444444
No 49
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.34 E-value=6.6e-12 Score=128.52 Aligned_cols=107 Identities=16% Similarity=0.216 Sum_probs=87.6
Q ss_pred ccCC-CCEEEEEeCCCcEEEEECCCCceeEEe-----cCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeE
Q 008196 2 YNCK-DEHLASISLSGDLILHNLASGAKAAEL-----KDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (574)
Q Consensus 2 FSpD-G~~LASGS~DGtVrIWDl~Tg~~l~t~-----~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~ 75 (574)
|.++ +.+|++|+.|++|+|||+.+++++..+ .+|...+ .+++|++....+|++|+.|++|++||+......+.
T Consensus 165 ~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~ 243 (380)
T 3iz6_a 165 YVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADV-LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVR 243 (380)
T ss_dssp CCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCE-EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCE
T ss_pred EecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCe-EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceE
Confidence 5565 457999999999999999999998887 4666667 77799874347799999999999999964444566
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 76 WLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 76 tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.+.+|...|.+++|+|++.+|++++.| +.+.+++
T Consensus 244 ~~~~h~~~v~~v~~~p~~~~l~s~s~D--~~i~lwd 277 (380)
T 3iz6_a 244 TYHGHEGDINSVKFFPDGQRFGTGSDD--GTCRLFD 277 (380)
T ss_dssp EECCCSSCCCEEEECTTSSEEEEECSS--SCEEEEE
T ss_pred EECCcCCCeEEEEEecCCCeEEEEcCC--CeEEEEE
Confidence 789999999999999999999999865 4444454
No 50
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.34 E-value=4.9e-12 Score=126.22 Aligned_cols=103 Identities=13% Similarity=0.149 Sum_probs=82.2
Q ss_pred CCEEEEEeCCCcEEEEECCCC---ceeEEecCCCCCeEEEEEEccCC---CeEEEEEeCCCcEEEEeCCCC---CceeEE
Q 008196 6 DEHLASISLSGDLILHNLASG---AKAAELKDPNEQVLRVLDYSRNS---RHLLVTAGDDGTLHLWDTTGR---SPKVSW 76 (574)
Q Consensus 6 G~~LASGS~DGtVrIWDl~Tg---~~l~t~~gh~~~Vvs~LafSPdG---r~LLaSgS~DGtVrLWDl~~~---~~ll~t 76 (574)
+++|++|+.|+.|+|||+..+ ..+..+.+|.+.| .+|+|+|++ ..+|++|+.|++|+|||+... ......
T Consensus 179 ~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V-~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~ 257 (316)
T 3bg1_A 179 IKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWV-RDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKL 257 (316)
T ss_dssp CCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCE-EEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCE
T ss_pred cceEEEecCCCeEEEEEeCCCCccceeeecccCCCce-EEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhh
Confidence 579999999999999999755 3567788888777 788999985 257999999999999998541 112234
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 77 LKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 77 l~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
+..|...|++++|+|++.+|++++.|. .+.+++
T Consensus 258 ~~~~~~~v~~v~~sp~g~~las~~~D~--~v~lw~ 290 (316)
T 3bg1_A 258 LHKFNDVVWHVSWSITANILAVSGGDN--KVTLWK 290 (316)
T ss_dssp EEECSSCEEEEEECTTTCCEEEEESSS--CEEEEE
T ss_pred hhcCCCcEEEEEEcCCCCEEEEEcCCC--eEEEEE
Confidence 567899999999999999999998664 444444
No 51
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.34 E-value=1.8e-11 Score=117.91 Aligned_cols=111 Identities=19% Similarity=0.217 Sum_probs=86.0
Q ss_pred ccCC--CCEEEEEeCCCcEEEEECCCCce---------------------------------------------------
Q 008196 2 YNCK--DEHLASISLSGDLILHNLASGAK--------------------------------------------------- 28 (574)
Q Consensus 2 FSpD--G~~LASGS~DGtVrIWDl~Tg~~--------------------------------------------------- 28 (574)
|+++ +++|++++.|+.|+|||+.+++.
T Consensus 118 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~ 197 (351)
T 3f3f_A 118 FAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQ 197 (351)
T ss_dssp ECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEE
T ss_pred EcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEE
Confidence 6788 88999999999999999865432
Q ss_pred ---------eEEecCCCCCeEEEEEEccCCC---eEEEEEeCCCcEEEEeCCCCC-------------------------
Q 008196 29 ---------AAELKDPNEQVLRVLDYSRNSR---HLLVTAGDDGTLHLWDTTGRS------------------------- 71 (574)
Q Consensus 29 ---------l~t~~gh~~~Vvs~LafSPdGr---~LLaSgS~DGtVrLWDl~~~~------------------------- 71 (574)
+..+.+|...+ .+|+|+|++. .+|++|+.||.|++||+....
T Consensus 198 ~~~~~~~~~~~~~~~h~~~i-~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (351)
T 3f3f_A 198 RGKDGKLHVAAKLPGHKSLI-RSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDA 276 (351)
T ss_dssp ECTTSCEEEEEECCCCCSCE-EEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------------------
T ss_pred ccCCCceeeeeecCCCCcce-eEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccc
Confidence 34455666666 8889999973 679999999999999995421
Q ss_pred --------------------ceeEEeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEeccCCC
Q 008196 72 --------------------PKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDETTCK 115 (574)
Q Consensus 72 --------------------~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e~~~s 115 (574)
..+..+.+|...|++++|+|++.+|++++.| +.+.+|+....
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d--g~v~iw~~~~~ 338 (351)
T 3f3f_A 277 QGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDD--GKVRLWKATYS 338 (351)
T ss_dssp --------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETT--SCEEEEEECTT
T ss_pred ccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCC--CcEEEEecCcC
Confidence 2445678899999999999999999999865 55555554433
No 52
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.33 E-value=2e-11 Score=119.70 Aligned_cols=104 Identities=19% Similarity=0.278 Sum_probs=85.8
Q ss_pred ccCC---CCEEEEEeCCCcEEEEECCC-Ccee-EEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEE
Q 008196 2 YNCK---DEHLASISLSGDLILHNLAS-GAKA-AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (574)
Q Consensus 2 FSpD---G~~LASGS~DGtVrIWDl~T-g~~l-~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~t 76 (574)
|+++ |++|++|+.||.|+|||+.+ +..+ ..+.+|...+ .+|+|+|++ .+|++++.||.|++||+.... ...
T Consensus 47 ~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~--~~~ 122 (368)
T 3mmy_A 47 FSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPV-LDVCWSDDG-SKVFTASCDKTAKMWDLSSNQ--AIQ 122 (368)
T ss_dssp ECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCE-EEEEECTTS-SEEEEEETTSEEEEEETTTTE--EEE
T ss_pred EcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCE-EEEEECcCC-CEEEEEcCCCcEEEEEcCCCC--cee
Confidence 7888 69999999999999999987 5555 6777788777 888999998 569999999999999997753 234
Q ss_pred eccCCCCeEEEEE--cCCCCEEEEEEecCCcCEEEec
Q 008196 77 LKQHSAPTAGISF--SSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 77 l~gH~~~VtSVaF--SPDG~~LaS~sWD~sg~viv~e 111 (574)
+.+|...|.+++| ++++.+|++++.| +.+.+++
T Consensus 123 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d--g~i~vwd 157 (368)
T 3mmy_A 123 IAQHDAPVKTIHWIKAPNYSCVMTGSWD--KTLKFWD 157 (368)
T ss_dssp EEECSSCEEEEEEEECSSCEEEEEEETT--SEEEEEC
T ss_pred eccccCceEEEEEEeCCCCCEEEEccCC--CcEEEEE
Confidence 6789999999999 8999999998754 3444444
No 53
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.32 E-value=1e-11 Score=125.94 Aligned_cols=105 Identities=16% Similarity=0.211 Sum_probs=83.8
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc--
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ-- 79 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g-- 79 (574)
|++++++|++|+.|+.|+|||+.+++.+..+.+|...+ .+|+|+|++ .+|++++.|++|++||+.... .+..+..
T Consensus 147 ~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v-~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~ 223 (420)
T 3vl1_A 147 FFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATV-TDIAIIDRG-RNVLSASLDGTIRLWECGTGT-TIHTFNRKE 223 (420)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCE-EEEEEETTT-TEEEEEETTSCEEEEETTTTE-EEEEECBTT
T ss_pred ECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcE-EEEEEcCCC-CEEEEEcCCCcEEEeECCCCc-eeEEeecCC
Confidence 89999999999999999999999999999999888887 788999998 559999999999999997643 3334443
Q ss_pred -CCCCeEE---------------------EEEcCCCCEEEEEEecCCcCEEEec
Q 008196 80 -HSAPTAG---------------------ISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 80 -H~~~VtS---------------------VaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
|...|.+ ++|+|++.+|++++.| +.+.+++
T Consensus 224 ~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--g~i~i~d 275 (420)
T 3vl1_A 224 NPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS--GVITVHN 275 (420)
T ss_dssp BTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT--SCEEEEE
T ss_pred CCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC--CeEEEEE
Confidence 4444444 4557889999998754 4454554
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.32 E-value=5.3e-11 Score=115.52 Aligned_cols=105 Identities=19% Similarity=0.198 Sum_probs=87.9
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~--~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
|++++++|++++.|+.|++||+.+++ ....+..|...+ .+++|+|++ .+|++++.|+.|++||+... ..+..+.+
T Consensus 105 ~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i-~~~~~~~~~-~~l~~~~~dg~v~~~d~~~~-~~~~~~~~ 181 (337)
T 1gxr_A 105 LLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPAC-YALAISPDS-KVCFSCCSDGNIAVWDLHNQ-TLVRQFQG 181 (337)
T ss_dssp ECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCE-EEEEECTTS-SEEEEEETTSCEEEEETTTT-EEEEEECC
T ss_pred EcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCce-EEEEECCCC-CEEEEEeCCCcEEEEeCCCC-ceeeeeec
Confidence 78999999999999999999998887 566777777667 788999998 56999999999999999774 45567888
Q ss_pred CCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 80 HSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 80 H~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
|...|.+++|+|++.+|++++.| +.+.+++
T Consensus 182 ~~~~i~~~~~~~~~~~l~~~~~d--g~i~~~d 211 (337)
T 1gxr_A 182 HTDGASCIDISNDGTKLWTGGLD--NTVRSWD 211 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETT--SEEEEEE
T ss_pred ccCceEEEEECCCCCEEEEEecC--CcEEEEE
Confidence 99999999999999999998744 4454444
No 55
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.32 E-value=1.8e-11 Score=119.70 Aligned_cols=104 Identities=17% Similarity=0.222 Sum_probs=82.4
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCce--------
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK-------- 73 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~l-------- 73 (574)
|+|++++|++|+.|+.|+|||+.+++.+..+..+ ..+ .+++|+|++ . +++++.|+.|++||+.+....
T Consensus 223 ~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v-~~~~~~~~~-~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 298 (340)
T 4aow_A 223 VSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DII-NALCFSPNR-Y-WLCAATGPSIKIWDLEGKIIVDELKQEVI 298 (340)
T ss_dssp ECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCE-EEEEECSSS-S-EEEEEETTEEEEEETTTTEEEEEECCC--
T ss_pred ECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceE-EeeecCCCC-c-eeeccCCCEEEEEECCCCeEEEeccccce
Confidence 7899999999999999999999999998888854 455 777999986 6 566778999999999763221
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 74 VSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 74 l~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.....+|...|++++|+|||++|++++.| +.+.+|+
T Consensus 299 ~~~~~~h~~~v~~l~~s~dg~~l~sgs~D--g~v~iW~ 334 (340)
T 4aow_A 299 STSSKAEPPQCTSLAWSADGQTLFAGYTD--NLVRVWQ 334 (340)
T ss_dssp -----CCCCCEEEEEECTTSSEEEEEETT--SCEEEEE
T ss_pred eeeccCCCCCEEEEEECCCCCEEEEEeCC--CEEEEEe
Confidence 12245788999999999999999999866 4455554
No 56
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.32 E-value=1e-11 Score=125.13 Aligned_cols=107 Identities=12% Similarity=0.228 Sum_probs=86.6
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCC----CceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCC------
Q 008196 2 YNCKDEHLASISLSGDLILHNLAS----GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS------ 71 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~T----g~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~------ 71 (574)
|++++++|++|+.||.|+|||+.+ ...+..+.+|...+ .+|+|+|++..+|++++.|+.|++||+....
T Consensus 75 ~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 153 (416)
T 2pm9_A 75 WSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSV-KTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNY 153 (416)
T ss_dssp ECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCC-CEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTC
T ss_pred ECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccce-EEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccc
Confidence 889999999999999999999987 35788888888877 7889999844679999999999999996543
Q ss_pred ce--eEEeccCCCCeEEEEEcCC-CCEEEEEEecCCcCEEEec
Q 008196 72 PK--VSWLKQHSAPTAGISFSSD-DKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 72 ~l--l~tl~gH~~~VtSVaFSPD-G~~LaS~sWD~sg~viv~e 111 (574)
.. ...+.+|...|.+++|+|+ +.+|++++.| +.+.+++
T Consensus 154 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--g~v~iwd 194 (416)
T 2pm9_A 154 TPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS--NFASIWD 194 (416)
T ss_dssp CCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS--SCEEEEE
T ss_pred cccccccccCCCCCeeEEEeCCCCCcEEEEEcCC--CCEEEEE
Confidence 11 2234679999999999999 6788887644 4555554
No 57
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.31 E-value=1e-11 Score=122.96 Aligned_cols=100 Identities=19% Similarity=0.306 Sum_probs=86.3
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCC-ceeEEec
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS-PKVSWLK 78 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~--~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~-~ll~tl~ 78 (574)
|++++++|++|+.|+.|+|||+.+++ .+..+.+|...+ .+++|+|++ .+|++++.|+.|++||+.... .....+.
T Consensus 16 ~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 93 (372)
T 1k8k_C 16 WNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQV-TGVDWAPDS-NRIVTCGTDRNAYVWTLKGRTWKPTLVIL 93 (372)
T ss_dssp ECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCE-EEEEEETTT-TEEEEEETTSCEEEEEEETTEEEEEEECC
T ss_pred ECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcc-cEEEEeCCC-CEEEEEcCCCeEEEEECCCCeeeeeEEee
Confidence 89999999999999999999998887 788898888777 888999998 569999999999999996543 2233457
Q ss_pred cCCCCeEEEEEcCCCCEEEEEEecC
Q 008196 79 QHSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 79 gH~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
.|...|.+++|+|++.+|++++.|.
T Consensus 94 ~~~~~v~~~~~~~~~~~l~~~~~d~ 118 (372)
T 1k8k_C 94 RINRAARCVRWAPNEKKFAVGSGSR 118 (372)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cCCCceeEEEECCCCCEEEEEeCCC
Confidence 8999999999999999999988553
No 58
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.31 E-value=1.6e-11 Score=135.73 Aligned_cols=98 Identities=13% Similarity=0.173 Sum_probs=88.2
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|+|+|.+||+|+.||.|+|||+.++..+..+.+|.+.+ .+++|+|++ .+|++|+.||.|++||+.+. ..+..+.+|.
T Consensus 21 ~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v-~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~-~~~~~~~~~~ 97 (814)
T 3mkq_A 21 FHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPV-RAGKFIARK-NWIIVGSDDFRIRVFNYNTG-EKVVDFEAHP 97 (814)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-EEEEEEGGG-TEEEEEETTSEEEEEETTTC-CEEEEEECCS
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcE-EEEEEeCCC-CEEEEEeCCCeEEEEECCCC-cEEEEEecCC
Confidence 89999999999999999999999999999999888877 888999998 55999999999999999764 3456788999
Q ss_pred CCeEEEEEcCCCCEEEEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD 102 (574)
..|++++|+|++.+|++++.|
T Consensus 98 ~~v~~~~~s~~~~~l~~~~~d 118 (814)
T 3mkq_A 98 DYIRSIAVHPTKPYVLSGSDD 118 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETT
T ss_pred CCEEEEEEeCCCCEEEEEcCC
Confidence 999999999999999987644
No 59
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.31 E-value=2.2e-11 Score=134.37 Aligned_cols=106 Identities=24% Similarity=0.368 Sum_probs=87.7
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeE--Eecc
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS--WLKQ 79 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~--tl~g 79 (574)
|+++|++|++|+.|+.|+|||+.++.++..+.+|...| .+|+|+|+++ +|++|+.|++|+|||+.+.+.... ...+
T Consensus 438 ~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v-~~~~~s~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~ 515 (694)
T 3dm0_A 438 LSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDV-LSVAFSLDNR-QIVSASRDRTIKLWNTLGECKYTISEGGEG 515 (694)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-EEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSTTS
T ss_pred ECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCE-EEEEEeCCCC-EEEEEeCCCEEEEEECCCCcceeeccCCCC
Confidence 78999999999999999999999999999999998888 7789999984 599999999999999866422211 1257
Q ss_pred CCCCeEEEEEcCCC--CEEEEEEecCCcCEEEec
Q 008196 80 HSAPTAGISFSSDD--KAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 80 H~~~VtSVaFSPDG--~~LaS~sWD~sg~viv~e 111 (574)
|...|.|++|+|++ ..|+++++|. .+.+++
T Consensus 516 h~~~v~~~~~~~~~~~~~l~s~s~d~--~v~vwd 547 (694)
T 3dm0_A 516 HRDWVSCVRFSPNTLQPTIVSASWDK--TVKVWN 547 (694)
T ss_dssp CSSCEEEEEECSCSSSCEEEEEETTS--CEEEEE
T ss_pred CCCcEEEEEEeCCCCcceEEEEeCCC--eEEEEE
Confidence 99999999999987 5788888664 344444
No 60
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.31 E-value=1.7e-11 Score=123.58 Aligned_cols=105 Identities=19% Similarity=0.296 Sum_probs=88.2
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCC---CceeEEec
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR---SPKVSWLK 78 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~---~~ll~tl~ 78 (574)
|++++++|++|+.|+.|++||+ +++.+..+.+|...+ .+|+|+|+++++|++|+.|++|++||+... ...+..+
T Consensus 171 ~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v-~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~- 247 (383)
T 3ei3_B 171 VSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKV-THAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM- 247 (383)
T ss_dssp EETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCE-EEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-
T ss_pred ECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcE-EEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-
Confidence 7899999999999999999999 688889999888877 788999999658999999999999999541 1233333
Q ss_pred cCCCCeEEEEEcC-CCCEEEEEEecCCcCEEEec
Q 008196 79 QHSAPTAGISFSS-DDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 79 gH~~~VtSVaFSP-DG~~LaS~sWD~sg~viv~e 111 (574)
+|...|.+++|+| ++.+|++++.| +.+.+++
T Consensus 248 ~~~~~v~~~~~s~~~~~~l~~~~~d--~~i~iwd 279 (383)
T 3ei3_B 248 PHEKPVNAAYFNPTDSTKLLTTDQR--NEIRVYS 279 (383)
T ss_dssp ECSSCEEEEEECTTTSCEEEEEESS--SEEEEEE
T ss_pred cCCCceEEEEEcCCCCCEEEEEcCC--CcEEEEE
Confidence 7999999999999 99999998855 4454554
No 61
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.30 E-value=3.5e-12 Score=131.68 Aligned_cols=105 Identities=15% Similarity=0.149 Sum_probs=82.6
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeE-----EecCCCCCeEEEEEEcc--------CCCeEEEEEeCCCcEEEEeCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAA-----ELKDPNEQVLRVLDYSR--------NSRHLLVTAGDDGTLHLWDTT 68 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~-----t~~gh~~~Vvs~LafSP--------dGr~LLaSgS~DGtVrLWDl~ 68 (574)
|.+++++||+|+.|++|+|||+.++.+.. .+.+|.+.| .+|+|+| |+ ++|++|+.|++|+|||+.
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v-~~v~~~p~~~~~~~~d~-~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFV-NDIDIADVYSADNRLAE-QVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCE-EEEEEEEEECTTCSEEE-EEEEEEETTSEEEEEEEE
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCce-EEEEEccccccccCCCC-CEEEEEECCCeEEEEECC
Confidence 34567799999999999999998876532 356788877 8889998 66 789999999999999996
Q ss_pred CCCceeEEeccCCCCeEEEEEcCCCC-EEEEEEecCCcCEEEec
Q 008196 69 GRSPKVSWLKQHSAPTAGISFSSDDK-AVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 69 ~~~~ll~tl~gH~~~VtSVaFSPDG~-~LaS~sWD~sg~viv~e 111 (574)
... .+..+.+|...|.+|+|+|++. +|++++.| +.+.+++
T Consensus 175 ~~~-~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d--~~v~~wd 215 (393)
T 4gq1_A 175 DEG-PILAGYPLSSPGISVQFRPSNPNQLIVGERN--GNIRIFD 215 (393)
T ss_dssp TTE-EEEEEEECSSCEEEEEEETTEEEEEEEEETT--SEEEEEE
T ss_pred CCc-eeeeecCCCCCcEEEEECCCCCceEEecCCC--CEEEEEE
Confidence 533 3446678888999999999885 68888755 4444444
No 62
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.29 E-value=1.8e-11 Score=122.83 Aligned_cols=105 Identities=20% Similarity=0.337 Sum_probs=89.4
Q ss_pred ccCCCCEEEEEeCC---CcEEEEECCCCceeEEecC-------------CCCCeEEEEEEccCCCeEEEEEeCCCcEEEE
Q 008196 2 YNCKDEHLASISLS---GDLILHNLASGAKAAELKD-------------PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLW 65 (574)
Q Consensus 2 FSpDG~~LASGS~D---GtVrIWDl~Tg~~l~t~~g-------------h~~~Vvs~LafSPdGr~LLaSgS~DGtVrLW 65 (574)
|++++++|++++.| +.|+|||+.+++.+..+.+ |...+ .+++|+|++ .+|++++.|+.|++|
T Consensus 241 ~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~-~~l~~~~~dg~i~iw 318 (397)
T 1sq9_A 241 FSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWV-MSLSFNDSG-ETLCSAGWDGKLRFW 318 (397)
T ss_dssp ECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCE-EEEEECSSS-SEEEEEETTSEEEEE
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcE-EEEEECCCC-CEEEEEeCCCeEEEE
Confidence 78999999999999 9999999999999999998 77777 788999998 569999999999999
Q ss_pred eCCCCCceeEEec------cC---------------CCCeEEEEEcCCC----------CEEEEEEecCCcCEEEec
Q 008196 66 DTTGRSPKVSWLK------QH---------------SAPTAGISFSSDD----------KAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 66 Dl~~~~~ll~tl~------gH---------------~~~VtSVaFSPDG----------~~LaS~sWD~sg~viv~e 111 (574)
|+... ..+..+. +| ...|++++|+|++ .+|+++++|. .+.+|+
T Consensus 319 d~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg--~i~iw~ 392 (397)
T 1sq9_A 319 DVKTK-ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDR--SIRWFR 392 (397)
T ss_dssp ETTTT-EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTT--EEEEEE
T ss_pred EcCCC-ceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCC--cEEEEE
Confidence 99764 3455666 77 8999999999998 7999988664 444443
No 63
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.29 E-value=8.7e-11 Score=120.39 Aligned_cols=104 Identities=19% Similarity=0.255 Sum_probs=90.1
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|++++++|++|+.||.|+|||+.+++.+..+.+|...+ .+++|+ + .+|++|+.|+.|++||+......+..+.+|.
T Consensus 142 ~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~--~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 217 (401)
T 4aez_A 142 WSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARV-GCLSWN--R-HVLSSGSRSGAIHHHDVRIANHQIGTLQGHS 217 (401)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE-EEEEEE--T-TEEEEEETTSEEEEEETTSSSCEEEEEECCS
T ss_pred ECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCce-EEEEEC--C-CEEEEEcCCCCEEEEecccCcceeeEEcCCC
Confidence 88999999999999999999999999999999888777 777994 3 4699999999999999975455677889999
Q ss_pred CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..|.+++|+|++.+|++++.| +.+.+++
T Consensus 218 ~~v~~~~~~~~~~~l~s~~~d--~~v~iwd 245 (401)
T 4aez_A 218 SEVCGLAWRSDGLQLASGGND--NVVQIWD 245 (401)
T ss_dssp SCEEEEEECTTSSEEEEEETT--SCEEEEE
T ss_pred CCeeEEEEcCCCCEEEEEeCC--CeEEEcc
Confidence 999999999999999998855 4454444
No 64
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.29 E-value=5.2e-11 Score=119.97 Aligned_cols=108 Identities=17% Similarity=0.247 Sum_probs=89.7
Q ss_pred ccCC-CCEEEEEeCCCcEEEEECCCCceeEEecCCC-----CCeEEEEEEccCCCeEEEEEeCCC---cEEEEeCCCCCc
Q 008196 2 YNCK-DEHLASISLSGDLILHNLASGAKAAELKDPN-----EQVLRVLDYSRNSRHLLVTAGDDG---TLHLWDTTGRSP 72 (574)
Q Consensus 2 FSpD-G~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~-----~~Vvs~LafSPdGr~LLaSgS~DG---tVrLWDl~~~~~ 72 (574)
|+++ +++|++++.|+.|+|||+.+++.+..+..+. ...+.+++|+|++..+|++++.|+ .|++||+.....
T Consensus 173 ~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~ 252 (416)
T 2pm9_A 173 WNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT 252 (416)
T ss_dssp ECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS
T ss_pred eCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC
Confidence 7888 7899999999999999999999998888763 344488899999877899999999 999999976434
Q ss_pred eeEEec-cCCCCeEEEEEcC-CCCEEEEEEecCCcCEEEec
Q 008196 73 KVSWLK-QHSAPTAGISFSS-DDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 73 ll~tl~-gH~~~VtSVaFSP-DG~~LaS~sWD~sg~viv~e 111 (574)
.+..+. +|...|.+++|+| ++.+|++++.| +.+.+++
T Consensus 253 ~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d--g~v~~wd 291 (416)
T 2pm9_A 253 PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD--NTVLLWN 291 (416)
T ss_dssp CSBCCCSCCSSCEEEEEECSSCSSCEEEEESS--SEEEEEC
T ss_pred CcEEeecCccCceeEEEeCCCCCCeEEEEeCC--CCEEEee
Confidence 455677 8999999999999 89999998754 4454554
No 65
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.29 E-value=1.8e-11 Score=124.64 Aligned_cols=99 Identities=19% Similarity=0.244 Sum_probs=77.6
Q ss_pred ccCCCCEEEEEeCCCc-EEEEECCCCceeEEec-C-CCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCc-eeEEe
Q 008196 2 YNCKDEHLASISLSGD-LILHNLASGAKAAELK-D-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP-KVSWL 77 (574)
Q Consensus 2 FSpDG~~LASGS~DGt-VrIWDl~Tg~~l~t~~-g-h~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~-ll~tl 77 (574)
|+|||++||+|+.|++ |+|||+.+++++..+. + |...+ .+|+|+|++ .+|++++.|++|+|||+..... ....+
T Consensus 203 ~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v-~~~~~s~~~-~~l~s~s~d~~v~iw~~~~~~~~~~~~~ 280 (355)
T 3vu4_A 203 LNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADV-VDMKWSTDG-SKLAVVSDKWTLHVFEIFNDQDNKRHAL 280 (355)
T ss_dssp ECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCE-EEEEECTTS-CEEEEEETTCEEEEEESSCCSCCCSEET
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcE-EEEEECCCC-CEEEEEECCCEEEEEEccCCCCcccccc
Confidence 8999999999999998 9999999999999998 5 66666 888999998 5699999999999999954211 11111
Q ss_pred ---------------------ccCCCCeEEEEEcCCCCEEEEEEec
Q 008196 78 ---------------------KQHSAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 78 ---------------------~gH~~~VtSVaFSPDG~~LaS~sWD 102 (574)
..+...+..++|++|+..|++++-|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~d 326 (355)
T 3vu4_A 281 KGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHT 326 (355)
T ss_dssp TTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTT
T ss_pred cceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCC
Confidence 1112234678999999999887644
No 66
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.29 E-value=6.5e-12 Score=123.29 Aligned_cols=107 Identities=18% Similarity=0.321 Sum_probs=86.6
Q ss_pred ccC---CCCEEEEEeCCCcEEEEECCCCceeEEec-----CCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCC--
Q 008196 2 YNC---KDEHLASISLSGDLILHNLASGAKAAELK-----DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS-- 71 (574)
Q Consensus 2 FSp---DG~~LASGS~DGtVrIWDl~Tg~~l~t~~-----gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~-- 71 (574)
|+| ++++|++|+.||.|+|||+.+++.+..+. +|...+ .+++|+|+++.+|++++.||.|++||+....
T Consensus 217 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 217 FDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTV-WQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp ESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCE-EEEEEETTEEEEEEEEETTSEEEEEEEECCSCC
T ss_pred cCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCE-EEEEECCCCCcEEEEEeCCCcEEEeecCCCccc
Confidence 677 89999999999999999998776655444 777777 7889999986589999999999999995321
Q ss_pred ----------------ceeEEeccCCCCeEEEEEcCCCCEEE-EEEecCCcCEEEec
Q 008196 72 ----------------PKVSWLKQHSAPTAGISFSSDDKAVS-SLCWQRAKPVFIDE 111 (574)
Q Consensus 72 ----------------~ll~tl~gH~~~VtSVaFSPDG~~La-S~sWD~sg~viv~e 111 (574)
..+..+.+|...|++++|+|++.+|+ +++.| +.+.+++
T Consensus 296 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d--~~i~iw~ 350 (357)
T 3i2n_A 296 SKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFD--QTVRVLI 350 (357)
T ss_dssp --CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETT--SEEEEEE
T ss_pred ccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCC--CcEEEEE
Confidence 23566888999999999999999998 67755 4444444
No 67
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.28 E-value=1e-11 Score=129.14 Aligned_cols=107 Identities=16% Similarity=0.136 Sum_probs=80.5
Q ss_pred ccC-CCCEEEEEeCCCcEEEEECCCCcee--EEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCcee-EEe
Q 008196 2 YNC-KDEHLASISLSGDLILHNLASGAKA--AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV-SWL 77 (574)
Q Consensus 2 FSp-DG~~LASGS~DGtVrIWDl~Tg~~l--~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll-~tl 77 (574)
|+| ++++||+|+.||.|+|||+.++... ..+.+|.+.| .+|+|+|.+..+|++|+.||+|+|||+.+..... ...
T Consensus 127 ~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V-~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 205 (435)
T 4e54_B 127 WHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSI-TGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASS 205 (435)
T ss_dssp ECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCC-CEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECC
T ss_pred EeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCE-EEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEecc
Confidence 787 5679999999999999999877654 3445787777 8889998534679999999999999997643221 112
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 78 KQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 78 ~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..+...+.+++|++++.+|++++.| +.+.+++
T Consensus 206 ~~~~~~~~~~~~~~~~~~l~~g~~d--g~i~~wd 237 (435)
T 4e54_B 206 DTINIWFCSLDVSASSRMVVTGDNV--GNVILLN 237 (435)
T ss_dssp SSCSCCCCCEEEETTTTEEEEECSS--SBEEEEE
T ss_pred CCCCccEEEEEECCCCCEEEEEeCC--CcEeeec
Confidence 2344568899999999999998744 4444443
No 68
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.28 E-value=1.3e-10 Score=112.67 Aligned_cols=104 Identities=13% Similarity=0.163 Sum_probs=87.5
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|++++++|++++.|+.|++||+.+++.+..+..|...+ .+++|+|++ .+|++++.|+.|++||+..... + ....|.
T Consensus 149 ~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i-~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~-~-~~~~~~ 224 (337)
T 1gxr_A 149 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA-SCIDISNDG-TKLWTGGLDNTVRSWDLREGRQ-L-QQHDFT 224 (337)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-EEEEECTTS-SEEEEEETTSEEEEEETTTTEE-E-EEEECS
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCce-EEEEECCCC-CEEEEEecCCcEEEEECCCCce-E-eeecCC
Confidence 78999999999999999999999999999999888777 788999998 5699999999999999976432 2 234577
Q ss_pred CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..|.+++|+|++.+|++++.+ +.+.+++
T Consensus 225 ~~v~~~~~s~~~~~l~~~~~~--~~i~~~~ 252 (337)
T 1gxr_A 225 SQIFSLGYCPTGEWLAVGMES--SNVEVLH 252 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETT--SCEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCC--CcEEEEE
Confidence 889999999999999998744 4454444
No 69
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.28 E-value=3.7e-11 Score=124.98 Aligned_cols=107 Identities=15% Similarity=0.291 Sum_probs=89.0
Q ss_pred ccC-CCCEEEEEeCCCcEEEEECCCC---ceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEe
Q 008196 2 YNC-KDEHLASISLSGDLILHNLASG---AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (574)
Q Consensus 2 FSp-DG~~LASGS~DGtVrIWDl~Tg---~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl 77 (574)
|++ ++.+|++++.|+.|+|||+.++ ..+..+..|...+ .+|+|+|+++++|++|+.||.|++||+......+..+
T Consensus 239 ~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v-~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~ 317 (430)
T 2xyi_A 239 WHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV-NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 317 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE-EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE
T ss_pred EeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe-EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe
Confidence 677 6789999999999999999887 5677888787777 8889999998789999999999999997644556678
Q ss_pred ccCCCCeEEEEEcCCCC-EEEEEEecCCcCEEEec
Q 008196 78 KQHSAPTAGISFSSDDK-AVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 78 ~gH~~~VtSVaFSPDG~-~LaS~sWD~sg~viv~e 111 (574)
.+|...|++++|+|++. +|++++.| +.+.+++
T Consensus 318 ~~h~~~v~~i~~sp~~~~~l~s~~~d--~~i~iwd 350 (430)
T 2xyi_A 318 ESHKDEIFQVQWSPHNETILASSGTD--RRLHVWD 350 (430)
T ss_dssp ECCSSCEEEEEECSSCTTEEEEEETT--SCCEEEE
T ss_pred ecCCCCEEEEEECCCCCCEEEEEeCC--CcEEEEe
Confidence 89999999999999996 57777755 4444444
No 70
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.28 E-value=2.4e-11 Score=123.63 Aligned_cols=100 Identities=18% Similarity=0.275 Sum_probs=80.2
Q ss_pred CEEEE--EeCCCcEEEEECCCCc----------------eeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCc-EEEEeC
Q 008196 7 EHLAS--ISLSGDLILHNLASGA----------------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT-LHLWDT 67 (574)
Q Consensus 7 ~~LAS--GS~DGtVrIWDl~Tg~----------------~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGt-VrLWDl 67 (574)
++++. |+.||.|+|||+.++. ++..+.+|.+.| .+|+|+|+| .+|++|+.|++ |+|||+
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v-~~~~~s~~g-~~l~s~s~d~~~v~iwd~ 225 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPI-KMVRLNRKS-DMVATCSQDGTIIRVFKT 225 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCE-EEEEECTTS-SEEEEEETTCSEEEEEET
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCce-EEEEECCCC-CEEEEEeCCCCEEEEEEC
Confidence 45555 5799999999998765 267888888888 888999998 66999999998 999999
Q ss_pred CCCCceeEEec-c-CCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 68 TGRSPKVSWLK-Q-HSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 68 ~~~~~ll~tl~-g-H~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.... .+..+. + |...|++++|+|++.+|++++.| +.+.+++
T Consensus 226 ~~~~-~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d--~~v~iw~ 268 (355)
T 3vu4_A 226 EDGV-LVREFRRGLDRADVVDMKWSTDGSKLAVVSDK--WTLHVFE 268 (355)
T ss_dssp TTCC-EEEEEECTTCCSCEEEEEECTTSCEEEEEETT--CEEEEEE
T ss_pred CCCc-EEEEEEcCCCCCcEEEEEECCCCCEEEEEECC--CEEEEEE
Confidence 7644 444565 5 99999999999999999999866 4444444
No 71
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.27 E-value=1.7e-11 Score=136.27 Aligned_cols=103 Identities=15% Similarity=0.171 Sum_probs=81.8
Q ss_pred CccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCC----eEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCc----
Q 008196 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQ----VLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP---- 72 (574)
Q Consensus 1 ~FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~----Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~---- 72 (574)
.|+|||++||+++.||.|+|||... ++..+. |+.. -+.+|+||||| ++|++|+.||+|+|||+.+...
T Consensus 92 awSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG-~~LAsgs~DGtVkIWd~~~~~l~~~~ 167 (588)
T 2j04_A 92 KPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIE-SSIVVGNEDGELQFFSIRKNSENTPE 167 (588)
T ss_dssp EECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSS-SCEEEEETTSEEEEEECCCCTTTCCC
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCC-CEEEEEcCCCEEEEEECCCCcccccc
Confidence 3899999999999999999999743 777777 6643 34889999999 5699999999999999976532
Q ss_pred --eeEEe----ccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 73 --KVSWL----KQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 73 --ll~tl----~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.+..+ .+|...|.+++|+||| +++++.| +.+.+|+
T Consensus 168 ~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D--~tVrlWd 208 (588)
T 2j04_A 168 FYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSN--NSVFSMT 208 (588)
T ss_dssp CEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETT--CCEEEEC
T ss_pred ceeeeeeecccccccccEEEEEEcCCc--EEEEeCC--CeEEEEE
Confidence 34555 7788899999999999 6666644 4444444
No 72
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.27 E-value=1e-10 Score=117.94 Aligned_cols=98 Identities=14% Similarity=0.189 Sum_probs=81.3
Q ss_pred ccCCC-CEEEEEeCCCcEEEEECCCCceeEEec--CCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEec
Q 008196 2 YNCKD-EHLASISLSGDLILHNLASGAKAAELK--DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (574)
Q Consensus 2 FSpDG-~~LASGS~DGtVrIWDl~Tg~~l~t~~--gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~ 78 (574)
|++++ ++|++|+.||.|+|||+.+++....+. +|...+ .+++|+|++..+|++++.|+.|++||+.+. .+..+.
T Consensus 81 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--~~~~~~ 157 (383)
T 3ei3_B 81 WHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAI-TGMKFNQFNTNQLFVSSIRGATTLRDFSGS--VIQVFA 157 (383)
T ss_dssp ECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBE-EEEEEETTEEEEEEEEETTTEEEEEETTSC--EEEEEE
T ss_pred ECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCce-eEEEeCCCCCCEEEEEeCCCEEEEEECCCC--ceEEEe
Confidence 78999 899999999999999999888877776 466666 888999943477999999999999999863 233343
Q ss_pred ---cCCCCeEEEEEcCCCCEEEEEEec
Q 008196 79 ---QHSAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 79 ---gH~~~VtSVaFSPDG~~LaS~sWD 102 (574)
+|...|.+++|+|++.+|++++.|
T Consensus 158 ~~~~~~~~v~~~~~~~~~~~l~~~~~d 184 (383)
T 3ei3_B 158 KTDSWDYWYCCVDVSVSRQMLATGDST 184 (383)
T ss_dssp CCCCSSCCEEEEEEETTTTEEEEEETT
T ss_pred ccCCCCCCeEEEEECCCCCEEEEECCC
Confidence 345789999999999999998744
No 73
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.27 E-value=5.3e-11 Score=118.70 Aligned_cols=106 Identities=21% Similarity=0.268 Sum_probs=88.4
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEe-----
Q 008196 3 NCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL----- 77 (574)
Q Consensus 3 SpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl----- 77 (574)
++++.+|++|+.|+.|++||+.+++.+..+..|...+ .+++|+|+++++|++|+.||.|++||+......+..+
T Consensus 153 ~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v-~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 231 (408)
T 4a11_B 153 STKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEI-LAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNG 231 (408)
T ss_dssp CSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCE-EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTT
T ss_pred CCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcE-EEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccccccc
Confidence 3466799999999999999999999999999888877 8889999997789999999999999996543233333
Q ss_pred ----------ccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 78 ----------KQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 78 ----------~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.+|...|.+++|+|++.+|++++.| +.+.+++
T Consensus 232 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~vwd 273 (408)
T 4a11_B 232 KKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD--NRMRLWN 273 (408)
T ss_dssp CSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT--SCEEEEE
T ss_pred ccceeeccccccccCceeEEEEcCCCCEEEEecCC--CeEEEEE
Confidence 5788999999999999999998854 4455554
No 74
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.27 E-value=2.1e-11 Score=122.28 Aligned_cols=97 Identities=16% Similarity=0.126 Sum_probs=75.7
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCcee-EEecC-CCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCce--eEEe
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKA-AELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK--VSWL 77 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l-~t~~g-h~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~l--l~tl 77 (574)
|+|+|++||+|+.||.|+|||+.+++.+ ..+.. |.+.+ .+|+|+|++ .+|++++ |+.|++||+...... +..+
T Consensus 178 ~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v-~~l~fs~~g-~~l~s~~-~~~v~iwd~~~~~~~~~~~~~ 254 (343)
T 3lrv_A 178 LHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKI-KEVKFADNG-YWMVVEC-DQTVVCFDLRKDVGTLAYPTY 254 (343)
T ss_dssp ECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCE-EEEEECTTS-SEEEEEE-SSBEEEEETTSSTTCBSSCCC
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCE-EEEEEeCCC-CEEEEEe-CCeEEEEEcCCCCcceeeccc
Confidence 8999999999999999999999999887 78887 77766 888999998 5688888 459999999664332 1122
Q ss_pred ccCCCCeE--EEEEcCCCCEEEEEEe
Q 008196 78 KQHSAPTA--GISFSSDDKAVSSLCW 101 (574)
Q Consensus 78 ~gH~~~Vt--SVaFSPDG~~LaS~sW 101 (574)
..|...+. +++|+|+|++|++++.
T Consensus 255 ~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 255 TIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp BC-----CCEEEEECTTSSEEEEEET
T ss_pred ccccccccceEEEECCCCCEEEEecC
Confidence 23444454 6999999999999875
No 75
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.25 E-value=1.2e-10 Score=116.46 Aligned_cols=104 Identities=27% Similarity=0.400 Sum_probs=81.4
Q ss_pred ccCCCC-EEEEEeCCCcEEEEEC----CCCc------eeEEecC----------CCCCeEEEEEEccCCCeEEEEEeCCC
Q 008196 2 YNCKDE-HLASISLSGDLILHNL----ASGA------KAAELKD----------PNEQVLRVLDYSRNSRHLLVTAGDDG 60 (574)
Q Consensus 2 FSpDG~-~LASGS~DGtVrIWDl----~Tg~------~l~t~~g----------h~~~Vvs~LafSPdGr~LLaSgS~DG 60 (574)
|+|+|+ +||+|+.|+.|+|||+ .+++ ....+.. |.+.+ .+|+|+|++ .+|++|+.||
T Consensus 53 ~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~s~~~-~~l~~~~~dg 130 (425)
T 1r5m_A 53 WNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQV-TCLAWSHDG-NSIVTGVENG 130 (425)
T ss_dssp ECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCE-EEEEECTTS-SEEEEEETTS
T ss_pred ECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCce-EEEEEcCCC-CEEEEEeCCC
Confidence 899999 9999999999999999 8888 4455543 34455 888999998 6699999999
Q ss_pred cEEEEeCCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 61 tVrLWDl~~~~~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.|++||..+ ..+..+.+|...|.+++|+|++.+|++++.| +.+.+++
T Consensus 131 ~i~i~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iwd 177 (425)
T 1r5m_A 131 ELRLWNKTG--ALLNVLNFHRAPIVSVKWNKDGTHIISMDVE--NVTILWN 177 (425)
T ss_dssp CEEEEETTS--CEEEEECCCCSCEEEEEECTTSSEEEEEETT--CCEEEEE
T ss_pred eEEEEeCCC--CeeeeccCCCccEEEEEECCCCCEEEEEecC--CeEEEEE
Confidence 999999544 3556788999999999999999999998754 4444444
No 76
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.25 E-value=1.1e-10 Score=117.15 Aligned_cols=104 Identities=18% Similarity=0.287 Sum_probs=88.6
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecC---C---CCCeEEEEEEccCCCeEEEEEeCC---CcEEEEeCCCCCc
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD---P---NEQVLRVLDYSRNSRHLLVTAGDD---GTLHLWDTTGRSP 72 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~g---h---~~~Vvs~LafSPdGr~LLaSgS~D---GtVrLWDl~~~~~ 72 (574)
|++++ +|++|+.|+.|+|||+.+++.+..+.. | ...+ .+++|+|++ .+|++++.| +.|++||+... .
T Consensus 194 ~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i-~~i~~~~~~-~~l~~~~~d~~~g~i~i~d~~~~-~ 269 (397)
T 1sq9_A 194 ISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI-RSVKFSPQG-SLLAIAHDSNSFGCITLYETEFG-E 269 (397)
T ss_dssp ECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCE-EEEEECSST-TEEEEEEEETTEEEEEEEETTTC-C
T ss_pred ECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCcc-ceEEECCCC-CEEEEEecCCCCceEEEEECCCC-c
Confidence 78999 999999999999999999999999998 7 6666 888999998 569999999 99999999764 3
Q ss_pred eeEEecc-------------CCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 73 KVSWLKQ-------------HSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 73 ll~tl~g-------------H~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.+..+.+ |...|.+++|+|++.+|++++.| +.+.+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd 319 (397)
T 1sq9_A 270 RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD--GKLRFWD 319 (397)
T ss_dssp EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT--SEEEEEE
T ss_pred ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC--CeEEEEE
Confidence 4556777 99999999999999999998854 4555555
No 77
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.25 E-value=2.1e-10 Score=112.04 Aligned_cols=105 Identities=21% Similarity=0.290 Sum_probs=85.7
Q ss_pred ccCC-CCEEEEEeCCCcEEEEECCCCc-----eeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeE
Q 008196 2 YNCK-DEHLASISLSGDLILHNLASGA-----KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (574)
Q Consensus 2 FSpD-G~~LASGS~DGtVrIWDl~Tg~-----~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~ 75 (574)
|+|+ +++||||+.|++|+|||+.+++ .+..+.+|...| .+++|+|++ .+|++++.|+.|++|+.... ....
T Consensus 46 ~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V-~~~~~s~dg-~~l~s~~~d~~i~~~~~~~~-~~~~ 122 (340)
T 4aow_A 46 TTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV-SDVVISSDG-QFALSGSWDGTLRLWDLTTG-TTTR 122 (340)
T ss_dssp ECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCE-EEEEECTTS-SEEEEEETTSEEEEEETTTT-EEEE
T ss_pred EeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCE-EEEEECCCC-CEEEEEcccccceEEeeccc-ceee
Confidence 7887 6899999999999999997654 456778888777 888999998 66999999999999999764 3444
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 76 WLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 76 tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
....+...+..+.|++++.+|++++.| +.+.+++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~s~s~d--~~~~~~d 156 (340)
T 4aow_A 123 RFVGHTKDVLSVAFSSDNRQIVSGSRD--KTIKLWN 156 (340)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEETT--SCEEEEC
T ss_pred eecCCCCceeEEEEeecCccceeecCC--CeEEEEE
Confidence 566778889999999999999998755 3444444
No 78
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.24 E-value=1.4e-11 Score=142.36 Aligned_cols=98 Identities=11% Similarity=0.066 Sum_probs=79.4
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCcee----EEe--c-----CCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKA----AEL--K-----DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR 70 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l----~t~--~-----gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~ 70 (574)
|++||++||+|+.|++|++||+.++... ..+ . +|...| .+|+|+||| .+||+|+.||+|+|||+.+.
T Consensus 443 ~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V-~svafspdg-~~LAsgs~DgtV~lwd~~~~ 520 (902)
T 2oaj_A 443 PAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAV-DKISFAAET-LELAVSIETGDVVLFKYEVN 520 (902)
T ss_dssp CCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCE-EEEEEETTT-TEEEEEETTSCEEEEEEEEC
T ss_pred ccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCce-eEEEecCCC-CeEEEEecCcEEEEEEecCc
Confidence 7899999999999999999999877421 111 1 566666 888999999 56999999999999999543
Q ss_pred C--------------------------------------------ceeEEeccCCCCeEEEEEcCCCCEEEEEEec
Q 008196 71 S--------------------------------------------PKVSWLKQHSAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 71 ~--------------------------------------------~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD 102 (574)
. ..+..+.+|...|++|+|+||| +|++++.|
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D 595 (902)
T 2oaj_A 521 QFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAA 595 (902)
T ss_dssp CC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETT
T ss_pred cccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCC
Confidence 1 1245678899999999999999 99986644
No 79
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.24 E-value=1.5e-10 Score=111.97 Aligned_cols=95 Identities=20% Similarity=0.345 Sum_probs=75.5
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecC--CCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD--PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~g--h~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
||+++ +||+| .|++|+|||+.+|+++..+.. |...| .+|+|+|++ .+|++|+.|++|++||+... ..+..+.+
T Consensus 33 WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V-~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~-~~~~~~~~ 107 (318)
T 4ggc_A 33 WSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYI-SSVAWIKEG-NYLAVGTSSAEVQLWDVQQQ-KRLRNMTS 107 (318)
T ss_dssp ECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCE-EEEEECTTS-SEEEEEETTSEEEEEETTTT-EEEEEEEC
T ss_pred ECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeE-EEEEECCCC-CEEEEEECCCcEEEeecCCc-eeEEEecC
Confidence 67665 77776 599999999999999887764 33445 888999998 56999999999999999774 45667889
Q ss_pred CCCCeEEEEEcCCCCEEEEEEecC
Q 008196 80 HSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 80 H~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
|...+.++.+ ++..+++++.+.
T Consensus 108 h~~~~~~~~~--~~~~l~s~~~~~ 129 (318)
T 4ggc_A 108 HSARVGSLSW--NSYILSSGSRSG 129 (318)
T ss_dssp CSSCEEEEEE--ETTEEEEEETTS
T ss_pred ccceEEEeec--CCCEEEEEecCC
Confidence 9988876655 567888876543
No 80
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.24 E-value=2.3e-11 Score=124.10 Aligned_cols=106 Identities=16% Similarity=0.248 Sum_probs=83.8
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCc-----------eeEEecCCC------------CCeEEEEEEccCCC-eEEEEEe
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGA-----------KAAELKDPN------------EQVLRVLDYSRNSR-HLLVTAG 57 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~-----------~l~t~~gh~------------~~Vvs~LafSPdGr-~LLaSgS 57 (574)
|+++|++||+|+.||.|+|||+.++. .+..+.+|. ..| .+|+|+|++. .+|++++
T Consensus 36 ~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V-~~l~~~~~~~~~~l~s~s 114 (447)
T 3dw8_B 36 FNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKI-NKIRWLPQKNAAQFLLST 114 (447)
T ss_dssp ECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCC-CEEEECCCCSSSEEEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCce-EEEEEcCCCCcceEEEeC
Confidence 89999999999999999999998876 477888887 566 7889999963 4588999
Q ss_pred CCCcEEEEeCCCCCce---------------------------------------eEEeccCCCCeEEEEEcCCCCEEEE
Q 008196 58 DDGTLHLWDTTGRSPK---------------------------------------VSWLKQHSAPTAGISFSSDDKAVSS 98 (574)
Q Consensus 58 ~DGtVrLWDl~~~~~l---------------------------------------l~tl~gH~~~VtSVaFSPDG~~LaS 98 (574)
.|++|++||+...... .....+|...|.+++|+|++.+|++
T Consensus 115 ~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 194 (447)
T 3dw8_B 115 NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLS 194 (447)
T ss_dssp CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEE
T ss_pred CCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEE
Confidence 9999999998541110 0124689999999999999999998
Q ss_pred EEecCCcCEEEec
Q 008196 99 LCWQRAKPVFIDE 111 (574)
Q Consensus 99 ~sWD~sg~viv~e 111 (574)
+ . ++.+.+++
T Consensus 195 ~-~--d~~i~iwd 204 (447)
T 3dw8_B 195 A-D--DLRINLWH 204 (447)
T ss_dssp E-C--SSEEEEEE
T ss_pred e-C--CCeEEEEE
Confidence 7 4 45555555
No 81
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.24 E-value=6.6e-11 Score=117.10 Aligned_cols=104 Identities=16% Similarity=0.096 Sum_probs=86.8
Q ss_pred ccCCCCEEEEEeCCCcEEEEEC------------------CCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEE
Q 008196 2 YNCKDEHLASISLSGDLILHNL------------------ASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLH 63 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl------------------~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVr 63 (574)
|++++++|++|+.|+.|+|||+ ..+..+..+..|...+ .+++|+|++ .+|++++.|+.|+
T Consensus 150 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~-~~l~~~~~d~~i~ 227 (372)
T 1k8k_C 150 WHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV-HGVCFSANG-SRVAWVSHDSTVC 227 (372)
T ss_dssp ECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCE-EEEEECSSS-SEEEEEETTTEEE
T ss_pred EcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeE-EEEEECCCC-CEEEEEeCCCEEE
Confidence 7899999999999999999995 4678888888887777 788999998 5699999999999
Q ss_pred EEeCCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 64 LWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 64 LWDl~~~~~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
+||+... ..+..+..|...|.+++|+|++.+|+++ .| +.+.+++
T Consensus 228 i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d--~~i~i~~ 271 (372)
T 1k8k_C 228 LADADKK-MAVATLASETLPLLAVTFITESSLVAAG-HD--CFPVLFT 271 (372)
T ss_dssp EEEGGGT-TEEEEEECSSCCEEEEEEEETTEEEEEE-TT--SSCEEEE
T ss_pred EEECCCC-ceeEEEccCCCCeEEEEEecCCCEEEEE-eC--CeEEEEE
Confidence 9999764 3556788999999999999999988776 34 4444443
No 82
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.24 E-value=3.1e-11 Score=123.72 Aligned_cols=103 Identities=12% Similarity=0.112 Sum_probs=81.0
Q ss_pred ccCCCCEEEEE--eCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 2 YNCKDEHLASI--SLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 2 FSpDG~~LASG--S~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
|+|||++||++ +.|++|+|||+.+++++..+. |++.| .+|+|+||| .+|++++.|+.+.+|+..+.........+
T Consensus 141 fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V-~~v~fspdg-~~l~s~s~~~~~~~~~~~~~~~~~~~~~~ 217 (365)
T 4h5i_A 141 ISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEV-KDLHFSTDG-KVVAYITGSSLEVISTVTGSCIARKTDFD 217 (365)
T ss_dssp ECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCC-CEEEECTTS-SEEEEECSSCEEEEETTTCCEEEEECCCC
T ss_pred EcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCce-EEEEEccCC-ceEEeccceeEEEEEeccCcceeeeecCC
Confidence 89999987654 479999999999999998887 66666 778999999 56888886655544444553333345677
Q ss_pred CCCCeEEEEEcCCCCEEEEEEecCCcCE
Q 008196 80 HSAPTAGISFSSDDKAVSSLCWQRAKPV 107 (574)
Q Consensus 80 H~~~VtSVaFSPDG~~LaS~sWD~sg~v 107 (574)
|...|.+++|+|++.++++++.+.....
T Consensus 218 ~~~~v~~v~fspdg~~l~~~s~d~~~~~ 245 (365)
T 4h5i_A 218 KNWSLSKINFIADDTVLIAASLKKGKGI 245 (365)
T ss_dssp TTEEEEEEEEEETTEEEEEEEESSSCCE
T ss_pred CCCCEEEEEEcCCCCEEEEEecCCccee
Confidence 8889999999999999999998876544
No 83
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.24 E-value=5.2e-11 Score=131.52 Aligned_cols=99 Identities=15% Similarity=0.258 Sum_probs=88.7
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|+++|++|++|+.||.|+|||+.+++.+..+.+|.+.+ .+++|+|++ .+|++++.||+|++||+.........+.+|.
T Consensus 63 ~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v-~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 140 (814)
T 3mkq_A 63 FIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYI-RSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGHE 140 (814)
T ss_dssp EEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-EEEEECSSS-SEEEEEETTSEEEEEEGGGTSEEEEEEECCS
T ss_pred EeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCE-EEEEEeCCC-CEEEEEcCCCEEEEEECCCCceEEEEEcCCC
Confidence 89999999999999999999999999999999888777 888999998 5599999999999999976545666788999
Q ss_pred CCeEEEEEcC-CCCEEEEEEec
Q 008196 82 APTAGISFSS-DDKAVSSLCWQ 102 (574)
Q Consensus 82 ~~VtSVaFSP-DG~~LaS~sWD 102 (574)
..|.+++|+| ++..|++++.|
T Consensus 141 ~~v~~~~~~p~~~~~l~~~~~d 162 (814)
T 3mkq_A 141 HFVMCVAFNPKDPSTFASGCLD 162 (814)
T ss_dssp SCEEEEEEETTEEEEEEEEETT
T ss_pred CcEEEEEEEcCCCCEEEEEeCC
Confidence 9999999999 88899887744
No 84
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.24 E-value=6.8e-11 Score=123.28 Aligned_cols=105 Identities=12% Similarity=0.115 Sum_probs=87.4
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeE----EecCCCCCeEEEEEEccC---CCeEEEEEeCCCcEEEEeCCCCCcee
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAA----ELKDPNEQVLRVLDYSRN---SRHLLVTAGDDGTLHLWDTTGRSPKV 74 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~----t~~gh~~~Vvs~LafSPd---Gr~LLaSgS~DGtVrLWDl~~~~~ll 74 (574)
|+|+|++|++|+.||.|++|++.++.... .+.+|...+ .+|+|+|+ + .+|++|+.|++|++||+.......
T Consensus 157 ~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v-~~~~~sp~~~~~-~~l~s~~~d~~i~vwd~~~~~~~~ 234 (450)
T 2vdu_B 157 IAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSML-TDVHLIKDSDGH-QFIITSDRDEHIKISHYPQCFIVD 234 (450)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCE-EEEEEEECTTSC-EEEEEEETTSCEEEEEESCTTCEE
T ss_pred EcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCce-EEEEEcCCCCCC-cEEEEEcCCCcEEEEECCCCceee
Confidence 89999999999999999999998877554 677787777 88899999 7 679999999999999997654444
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 75 SWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 75 ~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..+.+|...|.+++|+ ++.+|++++.| +.+.+|+
T Consensus 235 ~~~~~h~~~v~~~~~s-d~~~l~s~~~d--~~v~vwd 268 (450)
T 2vdu_B 235 KWLFGHKHFVSSICCG-KDYLLLSAGGD--DKIFAWD 268 (450)
T ss_dssp EECCCCSSCEEEEEEC-STTEEEEEESS--SEEEEEE
T ss_pred eeecCCCCceEEEEEC-CCCEEEEEeCC--CeEEEEE
Confidence 4467999999999999 99999998744 3444443
No 85
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.24 E-value=1.3e-10 Score=135.51 Aligned_cols=98 Identities=16% Similarity=0.298 Sum_probs=86.3
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|++||++||+|+.||.|+|||+.+++.+..+.+|.+.| .+|+|+|++ .+|++|+.|++|++||+.+. ..+..+.+|.
T Consensus 623 ~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v-~~~~~s~~~-~~l~s~~~d~~v~vwd~~~~-~~~~~~~~~~ 699 (1249)
T 3sfz_A 623 FSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEV-LCCAFSSDD-SYIATCSADKKVKIWDSATG-KLVHTYDEHS 699 (1249)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE-EEEEECTTS-SEEEEEETTSEEEEEETTTC-CEEEEEECCS
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCE-EEEEEecCC-CEEEEEeCCCeEEEEECCCC-ceEEEEcCCC
Confidence 89999999999999999999999999999999988888 788999998 56999999999999999774 4566788999
Q ss_pred CCeEEEEEcCC--CCEEEEEEec
Q 008196 82 APTAGISFSSD--DKAVSSLCWQ 102 (574)
Q Consensus 82 ~~VtSVaFSPD--G~~LaS~sWD 102 (574)
..|.+++|+++ +.++++++.|
T Consensus 700 ~~v~~~~~~~~~~~~~l~sg~~d 722 (1249)
T 3sfz_A 700 EQVNCCHFTNKSNHLLLATGSND 722 (1249)
T ss_dssp SCEEEEEECSSSSCCEEEEEETT
T ss_pred CcEEEEEEecCCCceEEEEEeCC
Confidence 99999999994 5577776533
No 86
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.24 E-value=8.3e-11 Score=120.52 Aligned_cols=107 Identities=17% Similarity=0.223 Sum_probs=89.9
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEe--CCCcEEEEeCCCCCceeEEecc
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG--DDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS--~DGtVrLWDl~~~~~ll~tl~g 79 (574)
|++++++|++|+.|+.|+|||+.++..+..+..|...+ .+++|+|++..++++++ .|+.|++||+.... .+..+ .
T Consensus 225 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v-~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~-~~~~~-~ 301 (401)
T 4aez_A 225 WRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAV-KAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA-RVNTV-D 301 (401)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCC-CEEEECTTSTTEEEEECCTTTCEEEEEETTTCC-EEEEE-E
T ss_pred EcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceE-EEEEECCCCCCEEEEecCCCCCEEEEEECCCCC-EEEEE-e
Confidence 78999999999999999999999999999998888777 78899999888888876 89999999997643 33344 4
Q ss_pred CCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 80 HSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 80 H~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
|...|.+++|+|++..|++++...++.+.+++
T Consensus 302 ~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~ 333 (401)
T 4aez_A 302 AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWS 333 (401)
T ss_dssp CSSCEEEEEECSSSSEEEEEECTTTCEEEEEE
T ss_pred CCCcEEEEEECCCCCeEEEEeecCCCcEEEEe
Confidence 66789999999999999997654556665555
No 87
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.24 E-value=4.9e-12 Score=138.15 Aligned_cols=105 Identities=11% Similarity=0.076 Sum_probs=86.3
Q ss_pred ccCCC-CEEEEEeCCCcEEEEECCCCceeEEecCCCC--CeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEec
Q 008196 2 YNCKD-EHLASISLSGDLILHNLASGAKAAELKDPNE--QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (574)
Q Consensus 2 FSpDG-~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~--~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~ 78 (574)
|+++| ++||+|+.|++|+|||+.+++++..+.+|.. .+ .+|+|+|++ ..+++++.|++|+|||+.... .+..+.
T Consensus 318 ~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v-~~v~fsp~~-~~l~s~~~d~tv~lwd~~~~~-~~~~l~ 394 (524)
T 2j04_B 318 YSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNL-VPVVYCPQI-YSYIYSDGASSLRAVPSRAAF-AVHPLV 394 (524)
T ss_dssp CCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSC-CCEEEETTT-TEEEEECSSSEEEEEETTCTT-CCEEEE
T ss_pred cCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcc-cceEeCCCc-CeEEEeCCCCcEEEEECcccc-cceeee
Confidence 67888 8999999999999999998888777776653 34 667999998 458999999999999997643 334678
Q ss_pred cCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 79 QHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 79 gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
+|...|++|+|+|+|.+|++++.|. .+.+++
T Consensus 395 gH~~~V~sva~Sp~g~~l~Sgs~Dg--tv~lwd 425 (524)
T 2j04_B 395 SRETTITAIGVSRLHPMVLAGSADG--SLIITN 425 (524)
T ss_dssp ECSSCEEEEECCSSCCBCEEEETTT--EEECCB
T ss_pred cCCCceEEEEeCCCCCeEEEEECCC--EEEEEe
Confidence 8999999999999999999998664 444444
No 88
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.23 E-value=7.6e-11 Score=117.92 Aligned_cols=104 Identities=14% Similarity=0.212 Sum_probs=90.5
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|++++++|++++.|+.|+|||+.+++.+..+..|...+ .+++|+|++ ++++++.|+.|++||+... ..+..+..|.
T Consensus 255 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i-~~~~~~~~~--~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~ 330 (425)
T 1r5m_A 255 FNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSI-VSASWVGDD--KVISCSMDGSVRLWSLKQN-TLLALSIVDG 330 (425)
T ss_dssp EETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCE-EEEEEETTT--EEEEEETTSEEEEEETTTT-EEEEEEECTT
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccE-EEEEECCCC--EEEEEeCCCcEEEEECCCC-cEeEecccCC
Confidence 78999999999999999999999999999998888777 788999998 6999999999999999764 3556778899
Q ss_pred CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..|.+++|+|++.+|++++.| +.+.+++
T Consensus 331 ~~i~~~~~s~~~~~l~~~~~d--g~i~i~~ 358 (425)
T 1r5m_A 331 VPIFAGRISQDGQKYAVAFMD--GQVNVYD 358 (425)
T ss_dssp CCEEEEEECTTSSEEEEEETT--SCEEEEE
T ss_pred ccEEEEEEcCCCCEEEEEECC--CeEEEEE
Confidence 999999999999999998854 4555554
No 89
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.23 E-value=8.5e-11 Score=113.17 Aligned_cols=102 Identities=15% Similarity=0.155 Sum_probs=85.9
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|++++. |++++.|+.|+|||+.+++.+..+..|...+ .+++|+|++ + |++++.|+.|++||+... ..+..+..|.
T Consensus 192 ~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i-~~~~~~~~~-~-l~~~~~dg~v~iwd~~~~-~~~~~~~~~~ 266 (313)
T 3odt_A 192 VVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFV-YCIKLLPNG-D-IVSCGEDRTVRIWSKENG-SLKQVITLPA 266 (313)
T ss_dssp EEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCE-EEEEECTTS-C-EEEEETTSEEEEECTTTC-CEEEEEECSS
T ss_pred EcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceE-EEEEEecCC-C-EEEEecCCEEEEEECCCC-ceeEEEeccC
Confidence 677887 9999999999999999999999999888777 788999998 5 889999999999999774 3556788899
Q ss_pred CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..|.+++|+|++. +++++. ++.+.+++
T Consensus 267 ~~i~~~~~~~~~~-~~~~~~--dg~i~iw~ 293 (313)
T 3odt_A 267 ISIWSVDCMSNGD-IIVGSS--DNLVRIFS 293 (313)
T ss_dssp SCEEEEEECTTSC-EEEEET--TSCEEEEE
T ss_pred ceEEEEEEccCCC-EEEEeC--CCcEEEEe
Confidence 9999999999998 455553 45555554
No 90
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.23 E-value=2.2e-11 Score=140.80 Aligned_cols=105 Identities=17% Similarity=0.161 Sum_probs=85.3
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCc---------------------------------------------eeEEecCCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGA---------------------------------------------KAAELKDPN 36 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~---------------------------------------------~l~t~~gh~ 36 (574)
|+|||++||+|+.||+|+|||+.+++ ++..+.+|.
T Consensus 496 fspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~ 575 (902)
T 2oaj_A 496 FAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANK 575 (902)
T ss_dssp EETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCS
T ss_pred ecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCC
Confidence 89999999999999999999997662 367788888
Q ss_pred CCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCcee----EEec-cCCCCeEEEEEc-----CCC---CEEEEEEecC
Q 008196 37 EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV----SWLK-QHSAPTAGISFS-----SDD---KAVSSLCWQR 103 (574)
Q Consensus 37 ~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll----~tl~-gH~~~VtSVaFS-----PDG---~~LaS~sWD~ 103 (574)
+.| .+|+|+||| +||+|+.|++|+|||+.+..... ..+. +|...|++|+|+ ||| .+|++++.|
T Consensus 576 ~~V-~svafSpdG--~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D- 651 (902)
T 2oaj_A 576 GKT-SAINNSNIG--FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDM- 651 (902)
T ss_dssp CSE-EEEEECBTS--EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETT-
T ss_pred CcE-EEEEecCCc--EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecC-
Confidence 888 788999998 69999999999999997643321 1233 899999999999 886 899998865
Q ss_pred CcCEEEec
Q 008196 104 AKPVFIDE 111 (574)
Q Consensus 104 sg~viv~e 111 (574)
+.+.+|+
T Consensus 652 -~tv~~wd 658 (902)
T 2oaj_A 652 -GEVITYK 658 (902)
T ss_dssp -SEEEEEE
T ss_pred -CcEEEEE
Confidence 4444444
No 91
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.23 E-value=1.5e-11 Score=126.88 Aligned_cols=98 Identities=13% Similarity=0.191 Sum_probs=79.3
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCcee----------
Q 008196 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV---------- 74 (574)
Q Consensus 5 DG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll---------- 74 (574)
||++||+|+.|++|+|||+.++.++..+..|+..+ .+|+|+|++..+|++|+.|++|++||+.......
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v-~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~ 233 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPG-ISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKN 233 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCE-EEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSC
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeecCCCCCc-EEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCccc
Confidence 78999999999999999998888888888888888 6779999986789999999999999995432211
Q ss_pred --------------EEeccCCCCeEEEEEc-CCCCEEEEEEecC
Q 008196 75 --------------SWLKQHSAPTAGISFS-SDDKAVSSLCWQR 103 (574)
Q Consensus 75 --------------~tl~gH~~~VtSVaFS-PDG~~LaS~sWD~ 103 (574)
....+|...|.++.|+ +|+..|++++.|.
T Consensus 234 ~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~ 277 (393)
T 4gq1_A 234 PWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSG 277 (393)
T ss_dssp CCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTS
T ss_pred ceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCC
Confidence 1234678889999986 8999999987553
No 92
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.23 E-value=7.2e-11 Score=120.38 Aligned_cols=105 Identities=15% Similarity=0.184 Sum_probs=82.1
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCC-CceeEE-------ecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCc-
Q 008196 2 YNCKDEHLASISLSGDLILHNLAS-GAKAAE-------LKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP- 72 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~T-g~~l~t-------~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~- 72 (574)
|++++++|++| .|+.|+|||+.+ +..+.. +.+|...+ .+++|+|++..+|++|+.|++|++||+.....
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVI-TAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCE-EEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcce-EEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 88999999999 899999999984 344442 45677666 88899999856799999999999999966432
Q ss_pred --eeEEeccCCC------------CeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 73 --KVSWLKQHSA------------PTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 73 --ll~tl~gH~~------------~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.+..+.+|.. .|.+++|+|++++|++++. +.+.+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~---~~v~iwd 312 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY---LSVKVWD 312 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES---SEEEEEE
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC---CeEEEEe
Confidence 1456778876 8999999999999998863 5555554
No 93
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.22 E-value=1.5e-10 Score=119.67 Aligned_cols=103 Identities=13% Similarity=0.171 Sum_probs=88.0
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCCC
Q 008196 3 NCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSA 82 (574)
Q Consensus 3 SpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~~ 82 (574)
..++++|++|+.||.|+|||+.+++.+..+.+|.+.| .+++|++++ +|++|+.||+|++||+... ..+..+.+|..
T Consensus 129 ~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V-~~l~~~~~~--~l~s~s~dg~i~vwd~~~~-~~~~~~~~h~~ 204 (464)
T 3v7d_B 129 QFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGV-WALKYAHGG--ILVSGSTDRTVRVWDIKKG-CCTHVFEGHNS 204 (464)
T ss_dssp EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-EEEEECSTT--EEEEEETTSCEEEEETTTT-EEEEEECCCSS
T ss_pred EECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCE-EEEEEcCCC--EEEEEeCCCCEEEEECCCC-cEEEEECCCCC
Confidence 4468899999999999999999999999999998888 888999987 5999999999999999764 35667889999
Q ss_pred CeEEEEEc--CCCCEEEEEEecCCcCEEEec
Q 008196 83 PTAGISFS--SDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 83 ~VtSVaFS--PDG~~LaS~sWD~sg~viv~e 111 (574)
.|.+++|+ +++.+|++++.| +.+.+++
T Consensus 205 ~v~~l~~~~~~~~~~l~s~s~d--~~i~vwd 233 (464)
T 3v7d_B 205 TVRCLDIVEYKNIKYIVTGSRD--NTLHVWK 233 (464)
T ss_dssp CEEEEEEEESSSCEEEEEEETT--SCEEEEE
T ss_pred ccEEEEEecCCCCCEEEEEcCC--CcEEEee
Confidence 99999998 577889998855 4444444
No 94
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.22 E-value=1e-10 Score=115.36 Aligned_cols=106 Identities=16% Similarity=0.209 Sum_probs=87.5
Q ss_pred ccCC--CCEEEEEeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEEccC--CCeEEEEEeCCCcEEEEeCCCC-Ccee
Q 008196 2 YNCK--DEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGR-SPKV 74 (574)
Q Consensus 2 FSpD--G~~LASGS~DGtVrIWDl~Tg~--~l~t~~gh~~~Vvs~LafSPd--Gr~LLaSgS~DGtVrLWDl~~~-~~ll 74 (574)
|+++ +++|++|+.||.|+|||+.+++ .+..+..|...+ .+++|+|+ + .+|++++.|+.|++||+... ....
T Consensus 63 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~ 140 (379)
T 3jrp_A 63 WAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASV-NSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSP 140 (379)
T ss_dssp ECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE-EEEEECCGGGC-SEEEEEETTSEEEEEECCTTSCCCE
T ss_pred eCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcce-EEEEeCCCCCC-CEEEEecCCCcEEEEecCCCCceee
Confidence 6666 8999999999999999999887 677777777777 88899999 7 66999999999999999654 2344
Q ss_pred EEeccCCCCeEEEEEcC-------------CCCEEEEEEecCCcCEEEec
Q 008196 75 SWLKQHSAPTAGISFSS-------------DDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 75 ~tl~gH~~~VtSVaFSP-------------DG~~LaS~sWD~sg~viv~e 111 (574)
..+.+|...|.+++|+| ++.+|++++.|. .+.+++
T Consensus 141 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg--~i~i~d 188 (379)
T 3jrp_A 141 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN--LVKIWK 188 (379)
T ss_dssp EEEECCTTCEEEEEECCCC----------CTTCEEEEEETTS--CEEEEE
T ss_pred EEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC--eEEEEE
Confidence 56788999999999999 699999988654 444443
No 95
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.22 E-value=8.5e-11 Score=120.00 Aligned_cols=107 Identities=16% Similarity=0.235 Sum_probs=86.7
Q ss_pred ccCCC-CEEEEEeCCCcEEEEECCCCceeEEe--cCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEe-
Q 008196 2 YNCKD-EHLASISLSGDLILHNLASGAKAAEL--KDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL- 77 (574)
Q Consensus 2 FSpDG-~~LASGS~DGtVrIWDl~Tg~~l~t~--~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl- 77 (574)
|++++ ++|++|+.|+.|+|||+.+++.+..+ ..|...+ .+|+|+|++ .+|++++.|+.|++||+.... .+..+
T Consensus 139 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v-~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~-~~~~~~ 215 (402)
T 2aq5_A 139 WHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTI-YSVDWSRDG-ALICTSCRDKRVRVIEPRKGT-VVAEKD 215 (402)
T ss_dssp ECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCE-EEEEECTTS-SCEEEEETTSEEEEEETTTTE-EEEEEE
T ss_pred ECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCce-EEEEECCCC-CEEEEEecCCcEEEEeCCCCc-eeeeec
Confidence 78998 69999999999999999999999999 6777777 888999998 559999999999999997743 34455
Q ss_pred ccCCCC-eEEEEEcCCCCEEEEEEe-cCCcCEEEec
Q 008196 78 KQHSAP-TAGISFSSDDKAVSSLCW-QRAKPVFIDE 111 (574)
Q Consensus 78 ~gH~~~-VtSVaFSPDG~~LaS~sW-D~sg~viv~e 111 (574)
.+|... +.+++|+|++.+|+++.- ..++.+.+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd 251 (402)
T 2aq5_A 216 RPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWD 251 (402)
T ss_dssp CSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEE
T ss_pred cCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEc
Confidence 788776 899999999998887731 1234454444
No 96
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.22 E-value=8.8e-12 Score=132.08 Aligned_cols=106 Identities=14% Similarity=0.152 Sum_probs=85.2
Q ss_pred ccCCCCEEE----EEeCCCcEEEEECCCC--------ce---eEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEe
Q 008196 2 YNCKDEHLA----SISLSGDLILHNLASG--------AK---AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWD 66 (574)
Q Consensus 2 FSpDG~~LA----SGS~DGtVrIWDl~Tg--------~~---l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWD 66 (574)
|+++|++|| +|+.|+.|+|||+.++ +. +..+.+|...+ .+|+|+|++..+|++++.||+|++||
T Consensus 100 ~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V-~~v~~~p~~~~~las~s~Dg~v~iwD 178 (434)
T 2oit_A 100 LSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMV-IDMKWNPTVPSMVAVCLADGSIAVLQ 178 (434)
T ss_dssp ECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSE-EEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred EcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCce-EEEEECCCCCCEEEEEECCCeEEEEE
Confidence 899999999 7889999999998654 22 34455666666 88899998557899999999999999
Q ss_pred CCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 67 TTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 67 l~~~~~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
+... ..+....+|...|++++|+|+|++|++++.| +.+.+++
T Consensus 179 ~~~~-~~~~~~~~~~~~v~~v~wspdg~~lasgs~d--g~v~iwd 220 (434)
T 2oit_A 179 VTET-VKVCATLPSTVAVTSVCWSPKGKQLAVGKQN--GTVVQYL 220 (434)
T ss_dssp ESSS-EEEEEEECGGGCEEEEEECTTSSCEEEEETT--SCEEEEC
T ss_pred cCCC-cceeeccCCCCceeEEEEcCCCCEEEEEcCC--CcEEEEc
Confidence 9774 3344566788899999999999999999844 5565555
No 97
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.22 E-value=7.4e-11 Score=122.70 Aligned_cols=107 Identities=19% Similarity=0.300 Sum_probs=88.8
Q ss_pred ccCCCC-EEEEEeCCCcEEEEECCC-CceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCC--------
Q 008196 2 YNCKDE-HLASISLSGDLILHNLAS-GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS-------- 71 (574)
Q Consensus 2 FSpDG~-~LASGS~DGtVrIWDl~T-g~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~-------- 71 (574)
|+++++ +|++|+.||.|+|||+.+ +..+..+..|...+ .+|+|+|+++.+|++++.|+.|+|||+....
T Consensus 285 ~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v-~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 363 (430)
T 2xyi_A 285 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEI-FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 363 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCE-EEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHH
T ss_pred eCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCE-EEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcccc
Confidence 789887 799999999999999987 56688888888777 7789999998889999999999999995411
Q ss_pred -----ceeEEeccCCCCeEEEEEcCCCC-EEEEEEecCCcCEEEec
Q 008196 72 -----PKVSWLKQHSAPTAGISFSSDDK-AVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 72 -----~ll~tl~gH~~~VtSVaFSPDG~-~LaS~sWD~sg~viv~e 111 (574)
..+..+.+|...|.+++|+|++. +|++++.| +.+.++.
T Consensus 364 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~d--g~i~iw~ 407 (430)
T 2xyi_A 364 EDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSED--NIMQVWQ 407 (430)
T ss_dssp HHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETT--SEEEEEE
T ss_pred ccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECC--CCEEEeE
Confidence 34566788999999999999999 77787744 4544544
No 98
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.21 E-value=1.8e-10 Score=121.94 Aligned_cols=99 Identities=16% Similarity=0.268 Sum_probs=87.0
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCC----ceeEEecCCCCC-eEEEEEEcc--CCCeEEEEEeCCCcEEEEeCCC-----
Q 008196 2 YNCKDEHLASISLSGDLILHNLASG----AKAAELKDPNEQ-VLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTG----- 69 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg----~~l~t~~gh~~~-Vvs~LafSP--dGr~LLaSgS~DGtVrLWDl~~----- 69 (574)
|+|||++||+++ |+.|+|||+.++ +.+..+.+|... | .+++|+| ++ .+|++|+.||.|++||+..
T Consensus 26 ~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v-~~~~~sp~~~~-~~l~s~~~dg~v~vw~~~~~~~~~ 102 (615)
T 1pgu_A 26 YDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVV-TTVKFSPIKGS-QYLCSGDESGKVIVWGWTFDKESN 102 (615)
T ss_dssp EETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCE-EEEEECSSTTC-CEEEEEETTSEEEEEEEEEEGGGT
T ss_pred ECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceE-EEEEECcCCCC-CEEEEecCCCEEEEEeCCCCcccc
Confidence 899999999998 889999999998 889999999888 6 8889999 98 6699999999999999953
Q ss_pred --CCceeEEeccCCCCeEEEEEcCCCCEEEEEEecC
Q 008196 70 --RSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 70 --~~~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
.......+..|...|.+++|+|++++|++++.+.
T Consensus 103 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~ 138 (615)
T 1pgu_A 103 SVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR 138 (615)
T ss_dssp EEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCS
T ss_pred cccccccchhhcccccEEEEEEeCCCCEEEEeccCC
Confidence 2345567788999999999999999999988654
No 99
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.20 E-value=1.9e-10 Score=114.65 Aligned_cols=106 Identities=19% Similarity=0.263 Sum_probs=84.1
Q ss_pred ccCCCC-EEEEEeCCCcEEEEECCCCc-eeEEe---------------cCCCCCeEEEEEEccCCCeEEEEEeCCCcEEE
Q 008196 2 YNCKDE-HLASISLSGDLILHNLASGA-KAAEL---------------KDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHL 64 (574)
Q Consensus 2 FSpDG~-~LASGS~DGtVrIWDl~Tg~-~l~t~---------------~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrL 64 (574)
|+++++ +|++|+.||.|+|||+.++. .+..+ ..|...+ .+++|+|++ .+|++++.|+.|++
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~-~~l~~~~~dg~i~v 271 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKV-NGLCFTSDG-LHLLTVGTDNRMRL 271 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCE-EEEEECTTS-SEEEEEETTSCEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCce-eEEEEcCCC-CEEEEecCCCeEEE
Confidence 788988 59999999999999998765 44444 3455556 788999998 56999999999999
Q ss_pred EeCCCCC----------------------------------------------ceeEEeccCCCCeEEEEEcCCCCEEEE
Q 008196 65 WDTTGRS----------------------------------------------PKVSWLKQHSAPTAGISFSSDDKAVSS 98 (574)
Q Consensus 65 WDl~~~~----------------------------------------------~ll~tl~gH~~~VtSVaFSPDG~~LaS 98 (574)
||+.... ..+..+.+|...|.+++|+|++.+|++
T Consensus 272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 351 (408)
T 4a11_B 272 WNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYS 351 (408)
T ss_dssp EETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEE
T ss_pred EECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEE
Confidence 9985422 223456789999999999999999999
Q ss_pred EEecCCcCEEEec
Q 008196 99 LCWQRAKPVFIDE 111 (574)
Q Consensus 99 ~sWD~sg~viv~e 111 (574)
++.| +.+.+|+
T Consensus 352 ~~~d--g~i~iw~ 362 (408)
T 4a11_B 352 GSRD--CNILAWV 362 (408)
T ss_dssp EETT--SCEEEEE
T ss_pred ECCC--CeEEEEe
Confidence 9865 4555554
No 100
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.20 E-value=2.1e-10 Score=112.51 Aligned_cols=104 Identities=7% Similarity=0.082 Sum_probs=87.6
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCC--------------cEEEEeC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--------------TLHLWDT 67 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DG--------------tVrLWDl 67 (574)
|++++++|++++.|+.|+|||+.+++.+..+. +...+ .+++|+|++ .++++++.++ .|++||+
T Consensus 226 ~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~-~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 302 (369)
T 3zwl_B 226 FSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPL-NTAVITPLK-EFIILGGGQEAKDVTTTSANEGKFEARFYHK 302 (369)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCE-EEEEECSSS-SEEEEEECCC-------------CEEEEEET
T ss_pred ECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCc-eeEEecCCC-ceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence 78999999999999999999999999988888 55556 777999998 5578888777 8999999
Q ss_pred CCCCceeEEeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 68 TGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 68 ~~~~~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
... ..+..+.+|...|.+++|+|++++|++++.| +.+.+++
T Consensus 303 ~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d--g~v~iw~ 343 (369)
T 3zwl_B 303 IFE-EEIGRVQGHFGPLNTVAISPQGTSYASGGED--GFIRLHH 343 (369)
T ss_dssp TTC-CEEEEEECCSSCEEEEEECTTSSEEEEEETT--SEEEEEE
T ss_pred CCC-cchhheecccCcEEEEEECCCCCEEEEEcCC--CeEEEEE
Confidence 774 3556788999999999999999999999865 4444444
No 101
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.20 E-value=7.5e-11 Score=115.60 Aligned_cols=104 Identities=13% Similarity=0.084 Sum_probs=85.5
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCc---eeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeC-CCCCceeEEe
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT-TGRSPKVSWL 77 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~---~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl-~~~~~ll~tl 77 (574)
|++++++|++|+.|+.|+|||+.++. .+..+..|...+ .+++|+|+++.+|++|+.||.|++||+ .... ...+
T Consensus 19 ~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~--~~~~ 95 (342)
T 1yfq_A 19 IIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPL-LCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS--FQAL 95 (342)
T ss_dssp EEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCE-EEEEEEESSSEEEEEEETTSCEEEECSSSSSS--EEEC
T ss_pred EcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCce-EEEEECCCCCcEEEEEcCCCeEEEEEeccCCc--eEec
Confidence 78999999999999999999998877 244555677677 888999998416999999999999999 7753 3567
Q ss_pred cc--CCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 78 KQ--HSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 78 ~g--H~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.+ |...|.+++|+| +..|+++++|. .+.+++
T Consensus 96 ~~~~~~~~v~~l~~~~-~~~l~s~~~d~--~i~iwd 128 (342)
T 1yfq_A 96 TNNEANLGICRICKYG-DDKLIAASWDG--LIEVID 128 (342)
T ss_dssp BSCCCCSCEEEEEEET-TTEEEEEETTS--EEEEEC
T ss_pred cccCCCCceEEEEeCC-CCEEEEEcCCC--eEEEEc
Confidence 88 999999999999 99999988663 444443
No 102
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.20 E-value=2.7e-10 Score=117.63 Aligned_cols=95 Identities=19% Similarity=0.323 Sum_probs=77.1
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecC--CCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD--PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~g--h~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
|++ +++||+|. |++|+|||+.+|+++..+.. |...| .+|+|+|+| .+|++|+.||+|+|||+... ..+..+.+
T Consensus 113 wS~-~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V-~sv~fspdg-~~lasgs~Dg~v~iWd~~~~-~~~~~~~~ 187 (420)
T 4gga_A 113 WSS-GNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYI-SSVAWIKEG-NYLAVGTSSAEVQLWDVQQQ-KRLRNMTS 187 (420)
T ss_dssp ECT-TSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCE-EEEEECTTS-SEEEEEETTSCEEEEETTTT-EEEEEECC
T ss_pred ECC-CCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcE-EEEEECCCC-CEEEEEECCCeEEEEEcCCC-cEEEEEeC
Confidence 555 46888875 99999999999998877764 44445 889999998 56999999999999999774 45667899
Q ss_pred CCCCeEEEEEcCCCCEEEEEEecC
Q 008196 80 HSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 80 H~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
|...|.+++| ++..|++++.|.
T Consensus 188 h~~~v~~~s~--~~~~l~sgs~d~ 209 (420)
T 4gga_A 188 HSARVGSLSW--NSYILSSGSRSG 209 (420)
T ss_dssp CSSCEEEEEE--ETTEEEEEETTS
T ss_pred CCCceEEEee--CCCEEEEEeCCC
Confidence 9999998887 567888887554
No 103
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.19 E-value=6.8e-11 Score=121.31 Aligned_cols=105 Identities=11% Similarity=0.164 Sum_probs=85.1
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecC--CCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEec-
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD--PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK- 78 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~g--h~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~- 78 (574)
|++++++|++|+.|+.|+|||+.+++.+..+.+ |.+.+ .+|+|+|++ .+|++|+.||+|++||+... ..+..+.
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v-~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~-~~~~~~~~ 254 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAV-SSICIDEEC-CVLILGTTRGIIDIWDIRFN-VLIRSWSF 254 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCE-EEEEECTTS-CEEEEEETTSCEEEEETTTT-EEEEEEBC
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCce-EEEEECCCC-CEEEEEcCCCeEEEEEcCCc-cEEEEEec
Confidence 567899999999999999999999999999998 55666 888999998 66999999999999999774 3444443
Q ss_pred cCCCCeEEEEEc----CCCCEEEEEEecCCcCEEEec
Q 008196 79 QHSAPTAGISFS----SDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 79 gH~~~VtSVaFS----PDG~~LaS~sWD~sg~viv~e 111 (574)
.|...|.+++|+ +++.+|++++.| +.+.+++
T Consensus 255 ~~~~~v~~~~~~~~~s~~~~~l~s~~~d--g~i~iwd 289 (437)
T 3gre_A 255 GDHAPITHVEVCQFYGKNSVIVVGGSSK--TFLTIWN 289 (437)
T ss_dssp TTCEEEEEEEECTTTCTTEEEEEEESTT--EEEEEEE
T ss_pred CCCCceEEEEeccccCCCccEEEEEcCC--CcEEEEE
Confidence 788899999665 567788887644 4555554
No 104
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.19 E-value=1e-10 Score=127.81 Aligned_cols=96 Identities=15% Similarity=0.186 Sum_probs=78.7
Q ss_pred CCEEEEEeCCCcEEEEECCCCce-----------eEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCcee
Q 008196 6 DEHLASISLSGDLILHNLASGAK-----------AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (574)
Q Consensus 6 G~~LASGS~DGtVrIWDl~Tg~~-----------l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll 74 (574)
+.+||+|+.||+|+|||+..+.. ...+.+|...+ .+|+|++++ .|++|+.||+|++||+.......
T Consensus 225 ~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v-~sv~~s~~~--~lasgs~DgtV~lWD~~~~~~~~ 301 (524)
T 2j04_B 225 VGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLI-TTFDFLSPT--TVVCGFKNGFVAEFDLTDPEVPS 301 (524)
T ss_dssp SCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCE-EEEEESSSS--EEEEEETTSEEEEEETTBCSSCS
T ss_pred CceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCE-EEEEecCCC--eEEEEeCCCEEEEEECCCCCCce
Confidence 67999999999999999987642 23677787777 888999864 59999999999999997543444
Q ss_pred EEeccCCCCeEEE--EEcCCC-CEEEEEEecCC
Q 008196 75 SWLKQHSAPTAGI--SFSSDD-KAVSSLCWQRA 104 (574)
Q Consensus 75 ~tl~gH~~~VtSV--aFSPDG-~~LaS~sWD~s 104 (574)
..+.+|...|++| +|++++ .+|+++++|..
T Consensus 302 ~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~t 334 (524)
T 2j04_B 302 FYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGY 334 (524)
T ss_dssp EEEECSSSCEEEEEEECCTTSCCEEEEEETTSE
T ss_pred EEeecccccEEEEEEEcCCCCCeEEEEeccCCe
Confidence 5688999999999 578888 89999997753
No 105
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.18 E-value=1.3e-10 Score=113.78 Aligned_cols=98 Identities=18% Similarity=0.290 Sum_probs=85.2
Q ss_pred ccC-CCCEEEEEeCCCcEEEEECCCC------ceeEEecCCCC---------CeEEEEEEccCCCeEEEEEeCCCcEEEE
Q 008196 2 YNC-KDEHLASISLSGDLILHNLASG------AKAAELKDPNE---------QVLRVLDYSRNSRHLLVTAGDDGTLHLW 65 (574)
Q Consensus 2 FSp-DG~~LASGS~DGtVrIWDl~Tg------~~l~t~~gh~~---------~Vvs~LafSPdGr~LLaSgS~DGtVrLW 65 (574)
|++ ++++|++|+.||.|+|||+..+ ..+..+..|.. .+ .+++|+|++ .+|++++.||.|++|
T Consensus 201 ~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~s~~~-~~l~~~~~dg~i~vw 278 (342)
T 1yfq_A 201 LLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPV-NSIEFSPRH-KFLYTAGSDGIISCW 278 (342)
T ss_dssp ECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCE-EEEEECTTT-CCEEEEETTSCEEEE
T ss_pred ECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeE-EEEEEcCCC-CEEEEecCCceEEEE
Confidence 788 9999999999999999999887 77888887754 55 888999998 559999999999999
Q ss_pred eCCCCCceeEEeccC-CCCeEEEEEcCCCCEEEEEEecCC
Q 008196 66 DTTGRSPKVSWLKQH-SAPTAGISFSSDDKAVSSLCWQRA 104 (574)
Q Consensus 66 Dl~~~~~ll~tl~gH-~~~VtSVaFSPDG~~LaS~sWD~s 104 (574)
|+... ..+..+.+| ...|.+++ +++.+|+++++|..
T Consensus 279 d~~~~-~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 279 NLQTR-KKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp ETTTT-EEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred cCccH-hHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 99764 345678888 99999999 99999999998865
No 106
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.18 E-value=2.8e-10 Score=111.58 Aligned_cols=106 Identities=17% Similarity=0.310 Sum_probs=83.0
Q ss_pred ccCC---CCEEEEEeCCCcEEEEECCCCc-eeEEecCCCCCeEEEEEE------ccCCCeEEEEEeCCCcEEEEeCCCCC
Q 008196 2 YNCK---DEHLASISLSGDLILHNLASGA-KAAELKDPNEQVLRVLDY------SRNSRHLLVTAGDDGTLHLWDTTGRS 71 (574)
Q Consensus 2 FSpD---G~~LASGS~DGtVrIWDl~Tg~-~l~t~~gh~~~Vvs~Laf------SPdGr~LLaSgS~DGtVrLWDl~~~~ 71 (574)
|+++ |++|++|+.||.|+|||+.+++ .+..+.+|...+ .+++| +|++ .+|++++.|+.|++||+....
T Consensus 73 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~s~~~-~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 73 FGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEII-NAIDGIGGLGIGEGA-PEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp CTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCE-EEEEEESGGGCC-CC-CEEEEEETTSCEEEECTTSCS
T ss_pred EcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccce-EEEeeccccccCCCc-cEEEEEeCCCeEEEEeCCCCC
Confidence 7777 7999999999999999999888 888999888777 77755 6787 569999999999999997654
Q ss_pred ceeEEeccCCC----CeEEEE----EcCCCCEEEEEEecCCcCEEEec
Q 008196 72 PKVSWLKQHSA----PTAGIS----FSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 72 ~ll~tl~gH~~----~VtSVa----FSPDG~~LaS~sWD~sg~viv~e 111 (574)
..+..+..|.. .|++++ |++++.+|++++.| +.+.+++
T Consensus 151 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d--~~i~i~d 196 (357)
T 3i2n_A 151 DPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN--GDIKLFD 196 (357)
T ss_dssp SCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT--SEEEEEE
T ss_pred CcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC--CeEEEEE
Confidence 34455655544 799998 68899999998744 4444444
No 107
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.16 E-value=2.2e-10 Score=133.45 Aligned_cols=100 Identities=23% Similarity=0.331 Sum_probs=89.1
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCC-CeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNS-RHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdG-r~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
|+++|++||+|+.|+.|+|||+.+++.+..+.+|...+ .+++|+|++ ..++++|+.|+.|++||+... ..+..+.+|
T Consensus 665 ~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~-~~~~~~~~h 742 (1249)
T 3sfz_A 665 FSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQV-NCCHFTNKSNHLLLATGSNDFFLKLWDLNQK-ECRNTMFGH 742 (1249)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-EEEEECSSSSCCEEEEEETTSCEEEEETTSS-SEEEEECCC
T ss_pred EecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcE-EEEEEecCCCceEEEEEeCCCeEEEEECCCc-chhheecCC
Confidence 89999999999999999999999999999999988887 788999953 357999999999999999774 355678899
Q ss_pred CCCeEEEEEcCCCCEEEEEEecC
Q 008196 81 SAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
...|++++|+|++.+|++++.|.
T Consensus 743 ~~~v~~~~~sp~~~~l~s~s~dg 765 (1249)
T 3sfz_A 743 TNSVNHCRFSPDDELLASCSADG 765 (1249)
T ss_dssp SSCEEEEEECSSTTEEEEEESSS
T ss_pred CCCEEEEEEecCCCEEEEEECCC
Confidence 99999999999999999987553
No 108
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.15 E-value=2.1e-10 Score=129.11 Aligned_cols=107 Identities=14% Similarity=0.239 Sum_probs=89.7
Q ss_pred CccCCCCEEEEEeCCCcEEEEECC--CCceeEEecCCCCCeEEEEEEccC--CCeEEEEEeCCCcEEEEeCCCCC-ceeE
Q 008196 1 MYNCKDEHLASISLSGDLILHNLA--SGAKAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PKVS 75 (574)
Q Consensus 1 ~FSpDG~~LASGS~DGtVrIWDl~--Tg~~l~t~~gh~~~Vvs~LafSPd--Gr~LLaSgS~DGtVrLWDl~~~~-~ll~ 75 (574)
.|+++|++|++|+.||.|+|||+. ++..+..+.+|.+.| .+|+|+++ + .+|++|+.||.|++||+.+.. ....
T Consensus 16 ~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V-~~l~~s~~~~~-~~l~s~s~Dg~I~vwd~~~~~~~~~~ 93 (753)
T 3jro_A 16 VLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPV-WRVDWAHPKFG-TILASCSYDGKVLIWKEENGRWSQIA 93 (753)
T ss_dssp CCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCE-EEEEECCTTSC-SEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred EECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCce-EEEEecCCCCC-CEEEEEeCCCeEEEEECCCCcccccc
Confidence 489999999999999999999997 456778888888777 88899987 6 669999999999999996642 2456
Q ss_pred EeccCCCCeEEEEEcCC--CCEEEEEEecCCcCEEEec
Q 008196 76 WLKQHSAPTAGISFSSD--DKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 76 tl~gH~~~VtSVaFSPD--G~~LaS~sWD~sg~viv~e 111 (574)
.+.+|...|.+++|+|+ +..|++++.| +.+.+++
T Consensus 94 ~~~~h~~~V~~v~~sp~~~~~~l~sgs~d--g~I~vwd 129 (753)
T 3jro_A 94 VHAVHSASVNSVQWAPHEYGPLLLVASSD--GKVSVVE 129 (753)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETT--SEEEEEE
T ss_pred cccCCCCCeEEEEECCCCCCCEEEEEeCC--CcEEEEE
Confidence 67889999999999999 9999998844 4444444
No 109
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.14 E-value=4.1e-10 Score=116.30 Aligned_cols=98 Identities=18% Similarity=0.266 Sum_probs=87.3
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|++||++||+|+.||.|+|||+.+++++..+.+|...+ .+++|+ + .+|++|+.|+.+++||.......+..+.+|.
T Consensus 155 fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v-~~~s~~--~-~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~ 230 (420)
T 4gga_A 155 WIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARV-GSLSWN--S-YILSSGSRSGHIHHHDVRVAEHHVATLSGHS 230 (420)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-EEEEEE--T-TEEEEEETTSEEEEEETTSSSCEEEEEECCS
T ss_pred ECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCce-EEEeeC--C-CEEEEEeCCCceeEeeecccceeeEEecccc
Confidence 89999999999999999999999999999999988777 565664 4 5699999999999999977666777889999
Q ss_pred CCeEEEEEcCCCCEEEEEEecC
Q 008196 82 APTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
..+.++.|++++.++++++.|.
T Consensus 231 ~~~~~~~~~~~g~~l~s~~~D~ 252 (420)
T 4gga_A 231 QEVCGLRWAPDGRHLASGGNDN 252 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTS
T ss_pred cceeeeeecCCCCeeeeeeccc
Confidence 9999999999999999988554
No 110
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.14 E-value=1.4e-10 Score=113.57 Aligned_cols=93 Identities=18% Similarity=0.303 Sum_probs=79.6
Q ss_pred EEEEeCCCcEEEEECCCC---ceeEEecCCCCC-----------eEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCcee
Q 008196 9 LASISLSGDLILHNLASG---AKAAELKDPNEQ-----------VLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (574)
Q Consensus 9 LASGS~DGtVrIWDl~Tg---~~l~t~~gh~~~-----------Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll 74 (574)
+++|+.|+.|+|||+... ..+..+..|... .+.+++|+|++ .+|++|+.||.|++||+... ..+
T Consensus 231 ~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~~~dg~i~iwd~~~~-~~~ 308 (368)
T 3mmy_A 231 FALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH-GTLATVGSDGRFSFWDKDAR-TKL 308 (368)
T ss_dssp EEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTT-CCEEEEETTSCEEEEETTTT-EEE
T ss_pred EEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCC-CEEEEEccCCeEEEEECCCC-cEE
Confidence 999999999999999887 557788877652 24888999998 55999999999999999763 456
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEEecC
Q 008196 75 SWLKQHSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 75 ~tl~gH~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
..+.+|...|++++|+|+|.+|++++.|.
T Consensus 309 ~~~~~~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 309 KTSEQLDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp EECCCCSSCEEEEEECTTSSCEEEEECCC
T ss_pred EEecCCCCCceEEEECCCCCeEEEEeccc
Confidence 67889999999999999999999988554
No 111
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.14 E-value=6.2e-10 Score=115.08 Aligned_cols=102 Identities=19% Similarity=0.175 Sum_probs=87.1
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCCC
Q 008196 3 NCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSA 82 (574)
Q Consensus 3 SpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~~ 82 (574)
++++++|++|+.|+.|++||+.+++++..+.+|...+ .+++|+|++ .+|++|+.|+.|++||+... ..+..+.+|..
T Consensus 277 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v-~~~~~~~~~-~~l~sg~~dg~i~vwd~~~~-~~~~~~~~h~~ 353 (464)
T 3v7d_B 277 SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRI-YSTIYDHER-KRCISASMDTTIRIWDLENG-ELMYTLQGHTA 353 (464)
T ss_dssp EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-EEEEEETTT-TEEEEEETTSCEEEEETTTT-EEEEEECCCSS
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCE-EEEEEcCCC-CEEEEEeCCCcEEEEECCCC-cEEEEEeCCCC
Confidence 4678899999999999999999999999999888777 788999998 55999999999999999763 45667899999
Q ss_pred CeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 83 PTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 83 ~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.|.+++|+ +.+|++++.| +.+.+++
T Consensus 354 ~v~~~~~~--~~~l~s~s~d--g~v~vwd 378 (464)
T 3v7d_B 354 LVGLLRLS--DKFLVSAAAD--GSIRGWD 378 (464)
T ss_dssp CEEEEEEC--SSEEEEEETT--SEEEEEE
T ss_pred cEEEEEEc--CCEEEEEeCC--CcEEEEE
Confidence 99999997 5789998855 4444444
No 112
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.13 E-value=2.9e-10 Score=126.34 Aligned_cols=103 Identities=12% Similarity=0.152 Sum_probs=82.2
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCc-------eeEEe----cCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGA-------KAAEL----KDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR 70 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~-------~l~t~----~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~ 70 (574)
|||||++||+|+.||+|+|||+..+. .+.++ .+|.+.| .+|+|+|+| +++++.|++|++||+.+.
T Consensus 137 fSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V-~sVawSPdg---Laass~D~tVrlWd~~~~ 212 (588)
T 2j04_A 137 WNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWV-THIVWYEDV---LVAALSNNSVFSMTVSAS 212 (588)
T ss_dssp ECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCE-EEEEEETTE---EEEEETTCCEEEECCCSS
T ss_pred EcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccE-EEEEEcCCc---EEEEeCCCeEEEEECCCC
Confidence 89999999999999999999998875 35676 5566566 788999997 778889999999999765
Q ss_pred Cc--eeEEe-ccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEeccC
Q 008196 71 SP--KVSWL-KQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDETT 113 (574)
Q Consensus 71 ~~--ll~tl-~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e~~ 113 (574)
.. ....+ .+|...|.+|+|+ |.+|++++ + +.+.+|+..
T Consensus 213 ~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~--~tIkLWd~~ 253 (588)
T 2j04_A 213 SHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-P--GYVHKIDLK 253 (588)
T ss_dssp SSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-S--SEEEEEETT
T ss_pred ccccceeeecccccCcEEEEEEE--CCEEEEEe-C--CeEEEEECC
Confidence 43 23455 4888899999999 68888886 3 455556533
No 113
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.13 E-value=4.9e-10 Score=116.76 Aligned_cols=106 Identities=10% Similarity=0.097 Sum_probs=86.1
Q ss_pred ccCCCCEE-EEEeCCCcEEEEECC--CCceeEEec--CCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCc---e
Q 008196 2 YNCKDEHL-ASISLSGDLILHNLA--SGAKAAELK--DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP---K 73 (574)
Q Consensus 2 FSpDG~~L-ASGS~DGtVrIWDl~--Tg~~l~t~~--gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~---l 73 (574)
|+++|++| ++|+.||.|+|||+. ++.++..+. .|...+ .+|+|+|++ .+|++|+.|+.|++||+..... .
T Consensus 110 ~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v-~~~~~sp~~-~~l~~~~~~g~v~~~~~~~~~~~~~~ 187 (450)
T 2vdu_B 110 LTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRP-NAISIAEDD-TTVIIADKFGDVYSIDINSIPEEKFT 187 (450)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCE-EEEEECTTS-SEEEEEETTSEEEEEETTSCCCSSCC
T ss_pred EcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCc-eEEEEcCCC-CEEEEEeCCCcEEEEecCCccccccc
Confidence 89999996 899999999999998 888888876 344555 888999998 5699999999999999954322 2
Q ss_pred eEEeccCCCCeEEEEEcCC---CCEEEEEEecCCcCEEEec
Q 008196 74 VSWLKQHSAPTAGISFSSD---DKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 74 l~tl~gH~~~VtSVaFSPD---G~~LaS~sWD~sg~viv~e 111 (574)
...+.+|...|++++|+|+ +.+|++++.| +.+.+++
T Consensus 188 ~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d--~~i~vwd 226 (450)
T 2vdu_B 188 QEPILGHVSMLTDVHLIKDSDGHQFIITSDRD--EHIKISH 226 (450)
T ss_dssp CCCSEECSSCEEEEEEEECTTSCEEEEEEETT--SCEEEEE
T ss_pred ceeeecccCceEEEEEcCCCCCCcEEEEEcCC--CcEEEEE
Confidence 2356789999999999999 9999998865 4444444
No 114
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.12 E-value=3.1e-10 Score=109.26 Aligned_cols=96 Identities=20% Similarity=0.226 Sum_probs=81.2
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCC--CceeEEecc
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR--SPKVSWLKQ 79 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~--~~ll~tl~g 79 (574)
| +++++|++|+.||.|+|||+.++.....+..|...+ .+++|+|++ .+|++++.|+.|++||+... ...+..+.+
T Consensus 26 ~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v-~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~ 102 (313)
T 3odt_A 26 A-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFL-NSVCYDSEK-ELLLFGGKDTMINGVPLFATSGEDPLYTLIG 102 (313)
T ss_dssp E-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCE-EEEEEETTT-TEEEEEETTSCEEEEETTCCTTSCC-CEECC
T ss_pred e-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccE-EEEEECCCC-CEEEEecCCCeEEEEEeeecCCCCcccchhh
Confidence 5 789999999999999999999988888888887777 888999998 56999999999999999432 233556789
Q ss_pred CCCCeEEEEEcCCCCEEEEEEec
Q 008196 80 HSAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 80 H~~~VtSVaFSPDG~~LaS~sWD 102 (574)
|...|.+++| ++..|++++.|
T Consensus 103 ~~~~i~~~~~--~~~~l~~~~~d 123 (313)
T 3odt_A 103 HQGNVCSLSF--QDGVVISGSWD 123 (313)
T ss_dssp CSSCEEEEEE--ETTEEEEEETT
T ss_pred cccCEEEEEe--cCCEEEEEeCC
Confidence 9999999999 67788887744
No 115
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.10 E-value=1.5e-09 Score=106.45 Aligned_cols=106 Identities=16% Similarity=0.197 Sum_probs=81.7
Q ss_pred ccCC----CCEEEEEeCCCcEEEEECCCCceeEEecCC-----CCCeEEEEEEccCCC---eEEEEEeCCCcEEEEeCCC
Q 008196 2 YNCK----DEHLASISLSGDLILHNLASGAKAAELKDP-----NEQVLRVLDYSRNSR---HLLVTAGDDGTLHLWDTTG 69 (574)
Q Consensus 2 FSpD----G~~LASGS~DGtVrIWDl~Tg~~l~t~~gh-----~~~Vvs~LafSPdGr---~LLaSgS~DGtVrLWDl~~ 69 (574)
|+|+ ..++++++.++.|+|||+.++..+..+..+ ...+ .+++|+|++. .+|++|+.||.|++||+..
T Consensus 26 ~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 104 (366)
T 3k26_A 26 FNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENF-YTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT 104 (366)
T ss_dssp ECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCE-EEEEEEECTTTCCEEEEEEETTCEEEEECTTT
T ss_pred EecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcE-EEEEeccCCCCCCCEEEEecCCCEEEEEEchh
Confidence 6663 446666667779999999988877666643 3445 8889999932 5799999999999999976
Q ss_pred CCceeEEeccCCCCeEEEEEcC-CCCEEEEEEecCCcCEEEec
Q 008196 70 RSPKVSWLKQHSAPTAGISFSS-DDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 70 ~~~ll~tl~gH~~~VtSVaFSP-DG~~LaS~sWD~sg~viv~e 111 (574)
. ..+..+.+|...|.+++|+| ++.+|++++.| +.+.+++
T Consensus 105 ~-~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d--g~i~iwd 144 (366)
T 3k26_A 105 M-QCIKHYVGHGNAINELKFHPRDPNLLLSVSKD--HALRLWN 144 (366)
T ss_dssp C-CEEEEEESCCSCEEEEEECSSCTTEEEEEETT--SCEEEEE
T ss_pred c-eEeeeecCCCCcEEEEEECCCCCCEEEEEeCC--CeEEEEE
Confidence 4 34567889999999999999 89999998754 4444444
No 116
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.08 E-value=1.3e-09 Score=105.37 Aligned_cols=104 Identities=19% Similarity=0.220 Sum_probs=88.7
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|+++|++||+|+.||.|+|||+.+++++..+.+|...+ .+ +++++ .++++++.++.+++|+.......+..+.+|.
T Consensus 75 ~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~-~~--~~~~~-~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (318)
T 4ggc_A 75 WIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARV-GS--LSWNS-YILSSGSRSGHIHHHDVRVAEHHVATLSGHS 150 (318)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-EE--EEEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCS
T ss_pred ECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceE-EE--eecCC-CEEEEEecCCceEeeecCCCceeEEEEcCcc
Confidence 89999999999999999999999999999999988766 34 44555 5699999999999999977666777889999
Q ss_pred CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..+.++.|++++.+|++++.|. .+.+++
T Consensus 151 ~~~~~~~~~~~~~~l~s~~~d~--~i~iwd 178 (318)
T 4ggc_A 151 QEVCGLRWAPDGRHLASGGNDN--LVNVWP 178 (318)
T ss_dssp SCEEEEEECTTSSEEEEEETTS--CEEEEE
T ss_pred CceEEEEEcCCCCEEEEEecCc--ceeEEE
Confidence 9999999999999999988654 444443
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.06 E-value=3.9e-09 Score=109.30 Aligned_cols=101 Identities=14% Similarity=0.254 Sum_probs=83.9
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
+..++++|++|+.||.|+|||+.+++.+..+.+|.+.+ .+++| ++ .+|++|+.||+|++||+... ..+..+.+|.
T Consensus 139 ~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~l~~--~~-~~l~sg~~dg~i~vwd~~~~-~~~~~~~~h~ 213 (435)
T 1p22_A 139 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV-LCLQY--DE-RVIITGSSDSTVRVWDVNTG-EMLNTLIHHC 213 (435)
T ss_dssp EECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCE-EEEEC--CS-SEEEEEETTSCEEEEESSSC-CEEEEECCCC
T ss_pred EEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcE-EEEEE--CC-CEEEEEcCCCeEEEEECCCC-cEEEEEcCCC
Confidence 34689999999999999999999999999999998877 77787 55 56999999999999999764 3566788999
Q ss_pred CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..|.+++|+ +..|++++.| +.+.+++
T Consensus 214 ~~v~~l~~~--~~~l~s~s~d--g~i~vwd 239 (435)
T 1p22_A 214 EAVLHLRFN--NGMMVTCSKD--RSIAVWD 239 (435)
T ss_dssp SCEEEEECC--TTEEEEEETT--SCEEEEE
T ss_pred CcEEEEEEc--CCEEEEeeCC--CcEEEEe
Confidence 999999996 4588888755 4444444
No 118
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.05 E-value=2.6e-09 Score=109.55 Aligned_cols=105 Identities=12% Similarity=0.097 Sum_probs=80.2
Q ss_pred ccCCCCEEEEEeCCCcEEEEECC---CCceeEEecC------------CCCCeEEEEE--EccCCCeEEEEEeCCCcEEE
Q 008196 2 YNCKDEHLASISLSGDLILHNLA---SGAKAAELKD------------PNEQVLRVLD--YSRNSRHLLVTAGDDGTLHL 64 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~---Tg~~l~t~~g------------h~~~Vvs~La--fSPdGr~LLaSgS~DGtVrL 64 (574)
|++++++|++|+.||.|+|||+. +++.+..+.. +...+ .++. +++++ .+|++|+.|+.|++
T Consensus 119 ~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~-~~l~~~~~d~~i~i 196 (437)
T 3gre_A 119 MIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYA-VRMRAFVNEEK-SLLVALTNLSRVII 196 (437)
T ss_dssp ECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCE-EEEEEEECSSC-EEEEEEETTSEEEE
T ss_pred EeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCc-eEEEEEEcCCC-CEEEEEeCCCeEEE
Confidence 78999999999999999999994 5555444332 22233 4445 55776 77999999999999
Q ss_pred EeCCCCCceeEEecc--CCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 65 WDTTGRSPKVSWLKQ--HSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 65 WDl~~~~~ll~tl~g--H~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
||+.... .+..+.+ |...|++++|+|++.+|++++.| +.+.+++
T Consensus 197 wd~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d--g~i~iwd 242 (437)
T 3gre_A 197 FDIRTLE-RLQIIENSPRHGAVSSICIDEECCVLILGTTR--GIIDIWD 242 (437)
T ss_dssp EETTTCC-EEEEEECCGGGCCEEEEEECTTSCEEEEEETT--SCEEEEE
T ss_pred EeCCCCe-eeEEEccCCCCCceEEEEECCCCCEEEEEcCC--CeEEEEE
Confidence 9997743 4556666 88999999999999999998855 4454554
No 119
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.03 E-value=3.8e-09 Score=109.21 Aligned_cols=101 Identities=15% Similarity=0.179 Sum_probs=83.5
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
+.++|++|++|+.||.|+|||+.+++.+..+.+|.+.+ .+++|++ .+|++|+.||+|++||+... ..+..+.+|.
T Consensus 125 ~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v-~~~~~~~---~~l~s~~~dg~i~vwd~~~~-~~~~~~~~h~ 199 (445)
T 2ovr_B 125 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV-WSSQMRD---NIIISGSTDRTLKVWNAETG-ECIHTLYGHT 199 (445)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCE-EEEEEET---TEEEEEETTSCEEEEETTTT-EEEEEECCCS
T ss_pred EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCE-EEEEecC---CEEEEEeCCCeEEEEECCcC-cEEEEECCCC
Confidence 45678999999999999999999999999999998888 7779973 46999999999999999764 4556788999
Q ss_pred CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..|.+++|+ +..|++++.| +.+.+++
T Consensus 200 ~~v~~~~~~--~~~l~s~s~d--g~i~~wd 225 (445)
T 2ovr_B 200 STVRCMHLH--EKRVVSGSRD--ATLRVWD 225 (445)
T ss_dssp SCEEEEEEE--TTEEEEEETT--SEEEEEE
T ss_pred CcEEEEEec--CCEEEEEeCC--CEEEEEE
Confidence 999999995 5678887744 3444443
No 120
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.01 E-value=6.5e-09 Score=108.66 Aligned_cols=97 Identities=14% Similarity=0.231 Sum_probs=79.9
Q ss_pred ccCCCCEEEEEeCCC---cEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCc--EEEEeCCCCCceeEE
Q 008196 2 YNCKDEHLASISLSG---DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT--LHLWDTTGRSPKVSW 76 (574)
Q Consensus 2 FSpDG~~LASGS~DG---tVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGt--VrLWDl~~~~~ll~t 76 (574)
|+|||++||+++.|+ .|++||+.++++. .+..|.+.+ .+++|+|||+.++++++.|+. |++||+.+.. ...
T Consensus 186 ~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~-~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~--~~~ 261 (415)
T 2hqs_A 186 WSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHN-GAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--IRQ 261 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCE-EEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--EEE
T ss_pred EcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcc-cCEEEcCCCCEEEEEEecCCCceEEEEECCCCC--EEe
Confidence 899999999999875 9999999988875 556566655 777999999776668877765 9999997643 346
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEEec
Q 008196 77 LKQHSAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 77 l~gH~~~VtSVaFSPDG~~LaS~sWD 102 (574)
+..|...+.+++|+|||++|+..+.+
T Consensus 262 l~~~~~~~~~~~~spdg~~l~~~s~~ 287 (415)
T 2hqs_A 262 VTDGRSNNTEPTWFPDSQNLAFTSDQ 287 (415)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEECT
T ss_pred CcCCCCcccceEECCCCCEEEEEECC
Confidence 78888899999999999999988753
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.99 E-value=7.8e-09 Score=103.86 Aligned_cols=105 Identities=18% Similarity=0.172 Sum_probs=80.2
Q ss_pred ccCCCCEE-EEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNCKDEHL-ASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSpDG~~L-ASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
|+++|++| ++++.|+.|++||+.+++.+..+..+. .+ .+++|+|++++++++++.|+.|++||+.+.. .+..+..|
T Consensus 39 ~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v-~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~-~~~~~~~~ 115 (391)
T 1l0q_A 39 ISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SP-QGVAVSPDGKQVYVTNMASSTLSVIDTTSNT-VAGTVKTG 115 (391)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SE-EEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEEEEECS
T ss_pred ECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cc-cceEECCCCCEEEEEECCCCEEEEEECCCCe-EEEEEeCC
Confidence 78999976 677799999999999999988888655 55 7889999997767788788999999997743 33344444
Q ss_pred CCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 81 SAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..+.+++|+|+++.|+..+.+ ++.+.+++
T Consensus 116 -~~~~~~~~s~dg~~l~~~~~~-~~~v~~~d 144 (391)
T 1l0q_A 116 -KSPLGLALSPDGKKLYVTNNG-DKTVSVIN 144 (391)
T ss_dssp -SSEEEEEECTTSSEEEEEETT-TTEEEEEE
T ss_pred -CCcceEEECCCCCEEEEEeCC-CCEEEEEE
Confidence 468999999999988544322 33444443
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.99 E-value=4.2e-09 Score=107.32 Aligned_cols=98 Identities=12% Similarity=0.086 Sum_probs=81.7
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|+++++++++++.|+.|++||+.+++.+..+..|...+ .+++|+|+++.++++++.|+.|++||+... ..+..+..+
T Consensus 177 ~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~-~~~~~~~~~- 253 (433)
T 3bws_A 177 IPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWS-KILLYDPIRDLVYCSNWISEDISVIDRKTK-LEIRKTDKI- 253 (433)
T ss_dssp EGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSE-EEEEEETTTTEEEEEETTTTEEEEEETTTT-EEEEECCCC-
T ss_pred EcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCe-eEEEEcCCCCEEEEEecCCCcEEEEECCCC-cEEEEecCC-
Confidence 67889999999999999999999999999998777666 788999999776677778999999999764 233344444
Q ss_pred CCeEEEEEcCCCCEEEEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD 102 (574)
..+.+++|+|++++|++++++
T Consensus 254 ~~~~~~~~~~~g~~l~~~~~~ 274 (433)
T 3bws_A 254 GLPRGLLLSKDGKELYIAQFS 274 (433)
T ss_dssp SEEEEEEECTTSSEEEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEECC
Confidence 459999999999999988764
No 123
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.97 E-value=2.5e-09 Score=120.28 Aligned_cols=106 Identities=16% Similarity=0.211 Sum_probs=87.3
Q ss_pred ccCC--CCEEEEEeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEEccC--CCeEEEEEeCCCcEEEEeCCCC-Ccee
Q 008196 2 YNCK--DEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGR-SPKV 74 (574)
Q Consensus 2 FSpD--G~~LASGS~DGtVrIWDl~Tg~--~l~t~~gh~~~Vvs~LafSPd--Gr~LLaSgS~DGtVrLWDl~~~-~~ll 74 (574)
|+++ +++|++|+.||.|+|||+.++. .+..+.+|...+ .+++|+|+ + .++++|+.||.|++||+... ....
T Consensus 61 ~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V-~~v~~sp~~~~-~~l~sgs~dg~I~vwdl~~~~~~~~ 138 (753)
T 3jro_A 61 WAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASV-NSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSP 138 (753)
T ss_dssp ECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE-EEEEECCGGGC-SEEEEEETTSEEEEEECCSSSCCCC
T ss_pred ecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCe-EEEEECCCCCC-CEEEEEeCCCcEEEEEeecCCCcce
Confidence 6777 9999999999999999998886 677777787777 88899999 7 66999999999999999653 2334
Q ss_pred EEeccCCCCeEEEEEcC-------------CCCEEEEEEecCCcCEEEec
Q 008196 75 SWLKQHSAPTAGISFSS-------------DDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 75 ~tl~gH~~~VtSVaFSP-------------DG~~LaS~sWD~sg~viv~e 111 (574)
..+.+|...|.+++|+| ++..|++++.| +.+.+++
T Consensus 139 ~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~d--g~I~iwd 186 (753)
T 3jro_A 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD--NLVKIWK 186 (753)
T ss_dssp EEEECCSSCEEEEEECCCC---------CGGGCCEEEEETT--SCEEEEE
T ss_pred eEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECC--CeEEEEe
Confidence 46788999999999999 58999998855 4444443
No 124
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.96 E-value=4e-09 Score=109.04 Aligned_cols=97 Identities=20% Similarity=0.278 Sum_probs=80.2
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeEEecC---CCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEe--
Q 008196 3 NCKDEHLASISLSGDLILHNLASGAKAAELKD---PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL-- 77 (574)
Q Consensus 3 SpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~g---h~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl-- 77 (574)
.+++++|++|+.||.|+|||+.+++.+..+.. |...+ .+++|+ + .+|++|+.||.|++||+.... .+..+
T Consensus 326 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v-~~~~~~--~-~~l~s~~~dg~v~iwd~~~~~-~~~~~~~ 400 (445)
T 2ovr_B 326 ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAV-TCLQFN--K-NFVITSSDDGTVKLWDLKTGE-FIRNLVT 400 (445)
T ss_dssp EEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCE-EEEEEC--S-SEEEEEETTSEEEEEETTTCC-EEEEEEE
T ss_pred EEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCE-EEEEEC--C-CEEEEEeCCCeEEEEECCCCc-eeeeeec
Confidence 34678999999999999999999999999986 55555 777885 3 469999999999999997643 33344
Q ss_pred ---ccCCCCeEEEEEcCCCCEEEEEEecCC
Q 008196 78 ---KQHSAPTAGISFSSDDKAVSSLCWQRA 104 (574)
Q Consensus 78 ---~gH~~~VtSVaFSPDG~~LaS~sWD~s 104 (574)
.+|...|++++|+|++.++++++.|..
T Consensus 401 ~~~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 401 LESGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp CTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred cccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 478889999999999999999987764
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.96 E-value=1.2e-08 Score=102.44 Aligned_cols=106 Identities=11% Similarity=0.087 Sum_probs=83.6
Q ss_pred ccCCCCEE-EEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNCKDEHL-ASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSpDG~~L-ASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
|+++|++| ++++.|+.|++||+.+++.+..+..+ ..+ .+++|+|+++.++++++.|+.|++||+.... ....+ .|
T Consensus 123 ~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~-~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~-~~~~~-~~ 198 (391)
T 1l0q_A 123 LSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSP-KGIAVTPDGTKVYVANFDSMSISVIDTVTNS-VIDTV-KV 198 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSE-EEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEEEE-EC
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCc-ceEEECCCCCEEEEEeCCCCEEEEEECCCCe-EEEEE-ec
Confidence 78999977 68888999999999999988888755 345 7779999997777889999999999997643 33233 45
Q ss_pred CCCeEEEEEcCCCCEEEEEEec-CCcCEEEec
Q 008196 81 SAPTAGISFSSDDKAVSSLCWQ-RAKPVFIDE 111 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~LaS~sWD-~sg~viv~e 111 (574)
...+.+++|+|++++|++++.+ ..+.+.+++
T Consensus 199 ~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d 230 (391)
T 1l0q_A 199 EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMID 230 (391)
T ss_dssp SSEEEEEEECTTSSEEEEEEECSSCCEEEEEE
T ss_pred CCCccceEECCCCCEEEEEecCcCCCcEEEEE
Confidence 5679999999999999988753 344555554
No 126
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.95 E-value=1.7e-08 Score=104.53 Aligned_cols=100 Identities=19% Similarity=0.281 Sum_probs=82.2
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCce--eEEeccCC
Q 008196 4 CKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK--VSWLKQHS 81 (574)
Q Consensus 4 pDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~l--l~tl~gH~ 81 (574)
.++++|++|+.||.|+|||+.+++.+..+.+|...+ .+++|++ .++++|+.||.|++||+...... ...+.+|.
T Consensus 181 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v-~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~ 256 (435)
T 1p22_A 181 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV-LHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 256 (435)
T ss_dssp CCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCE-EEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCS
T ss_pred ECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcE-EEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCC
Confidence 378999999999999999999999999999888777 7778874 35999999999999999654322 25678999
Q ss_pred CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 82 APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..|.+++| ++.+|++++.| +.+.+++
T Consensus 257 ~~v~~~~~--~~~~l~s~~~d--g~i~vwd 282 (435)
T 1p22_A 257 AAVNVVDF--DDKYIVSASGD--RTIKVWN 282 (435)
T ss_dssp SCEEEEEE--ETTEEEEEETT--SEEEEEE
T ss_pred CcEEEEEe--CCCEEEEEeCC--CeEEEEE
Confidence 99999999 78899998754 3444443
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.94 E-value=6e-09 Score=106.19 Aligned_cols=97 Identities=10% Similarity=0.103 Sum_probs=80.6
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEE-----ecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEE
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAE-----LKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t-----~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~t 76 (574)
|++++.++++++.|+.|++||+.+++.+.. +.+|.+.+ .+++|++++ .++++++.|+.|++||+.+. ..+..
T Consensus 130 ~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v-~~~~~~~~~-~~~~s~~~d~~v~~~d~~~~-~~~~~ 206 (433)
T 3bws_A 130 FIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFV-ETISIPEHN-ELWVSQMQANAVHVFDLKTL-AYKAT 206 (433)
T ss_dssp ESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEE-EEEEEGGGT-EEEEEEGGGTEEEEEETTTC-CEEEE
T ss_pred EeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCce-eEEEEcCCC-EEEEEECCCCEEEEEECCCc-eEEEE
Confidence 778778888888999999999999988763 34566556 788999997 77999999999999999764 34456
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEEe
Q 008196 77 LKQHSAPTAGISFSSDDKAVSSLCW 101 (574)
Q Consensus 77 l~gH~~~VtSVaFSPDG~~LaS~sW 101 (574)
+..|...+.+++|+|++..++..++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~~~~ 231 (433)
T 3bws_A 207 VDLTGKWSKILLYDPIRDLVYCSNW 231 (433)
T ss_dssp EECSSSSEEEEEEETTTTEEEEEET
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEec
Confidence 7788989999999999998876653
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.94 E-value=3.4e-09 Score=112.24 Aligned_cols=95 Identities=11% Similarity=0.075 Sum_probs=75.5
Q ss_pred ccCC-CCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNCK-DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSpD-G~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
|+|+ +++||+|+.||+|+|||+.++..+....+|...+ .+++|+|+| .+|++|+.||+|++||+.+. ....+..|
T Consensus 157 ~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v-~~v~wspdg-~~lasgs~dg~v~iwd~~~~--~~~~~~~~ 232 (434)
T 2oit_A 157 WNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAV-TSVCWSPKG-KQLAVGKQNGTVVQYLPTLQ--EKKVIPCP 232 (434)
T ss_dssp ECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCE-EEEEECTTS-SCEEEEETTSCEEEECTTCC--EEEEECCC
T ss_pred ECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCce-eEEEEcCCC-CEEEEEcCCCcEEEEccCCc--ccccccCC
Confidence 8887 7899999999999999999887776666676666 888999998 45999999999999999742 22233332
Q ss_pred -------CCCeEEEEEcCCCCEEEEEE
Q 008196 81 -------SAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 81 -------~~~VtSVaFSPDG~~LaS~s 100 (574)
...|.+++|++++.++++..
T Consensus 233 ~~~~~~~~~~v~~v~w~~~~~~l~~~~ 259 (434)
T 2oit_A 233 PFYESDHPVRVLDVLWIGTYVFAIVYA 259 (434)
T ss_dssp TTCCTTSCEEEEEEEEEETTEEEEEEE
T ss_pred cccCCCCceeEEEEEEecCceEEEEEc
Confidence 33799999999887776543
No 129
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.87 E-value=1.7e-08 Score=106.26 Aligned_cols=84 Identities=8% Similarity=0.091 Sum_probs=65.7
Q ss_pred CCCcEEEEEC-CCCceeEEecCCCCCeEEEEEEcc---CCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC---CCeEE
Q 008196 14 LSGDLILHNL-ASGAKAAELKDPNEQVLRVLDYSR---NSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS---APTAG 86 (574)
Q Consensus 14 ~DGtVrIWDl-~Tg~~l~t~~gh~~~Vvs~LafSP---dGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~---~~VtS 86 (574)
.|+.|++|++ .+|+.+..+.+|...+ ++++|++ ++ .+|++++.|++|+|||+.+. ..+.++.+|. ..|.+
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v-~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~TG-k~l~tL~g~~~~v~~v~~ 231 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEE-TILTFAEVQGMQ-EALLGTTIMNNIVIWNLKTG-QLLKKMHIDDSYQASVCH 231 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSS-CEEEEEEEETST-TEEEEEETTSEEEEEETTTC-CEEEEEECCC---CCCEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCce-eeEEeeccCCCC-ceEEEecCCCcEEEEECCCC-cEEEEEcCCCcceeeeEE
Confidence 3888999998 4477778888777777 6778888 55 66999999999999999874 3455676654 35788
Q ss_pred EEEcCCCCEEEEEE
Q 008196 87 ISFSSDDKAVSSLC 100 (574)
Q Consensus 87 VaFSPDG~~LaS~s 100 (574)
++|+|+|.++++.+
T Consensus 232 vafSpdG~~lvs~s 245 (356)
T 2w18_A 232 KAYSEMGLLFIVLS 245 (356)
T ss_dssp EEEEETTEEEEEEC
T ss_pred EEECCCCCEEEEec
Confidence 89999999887644
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.85 E-value=3.3e-08 Score=93.24 Aligned_cols=101 Identities=10% Similarity=0.125 Sum_probs=77.7
Q ss_pred ccCCCCEEE-EEeCCCcEEEEECCC-CceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 2 YNCKDEHLA-SISLSGDLILHNLAS-GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 2 FSpDG~~LA-SGS~DGtVrIWDl~T-g~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
|+|||++|+ +++.|+.++||++.. +.....+..+...+ .+++|+|+++.+++++..|+.++||++.........+..
T Consensus 136 ~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 136 WSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRN-DGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp ECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCE-EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC
T ss_pred ECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCcc-ccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec
Confidence 899999877 788899999999632 23345566565556 778999999776666667999999998532334556778
Q ss_pred CCCCeEEEEEcCCCCEEEEEEecC
Q 008196 80 HSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 80 H~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
|...+.+++|+|+|++|+..+.+.
T Consensus 215 ~~~~~~~~~~s~dg~~l~~~~~~~ 238 (297)
T 2ojh_A 215 SAYGDWFPHPSPSGDKVVFVSYDA 238 (297)
T ss_dssp CSEEEEEEEECTTSSEEEEEEEET
T ss_pred CCcccCCeEECCCCCEEEEEEcCC
Confidence 888899999999999999988764
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.76 E-value=6.6e-08 Score=91.14 Aligned_cols=97 Identities=14% Similarity=0.069 Sum_probs=69.8
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCC-CceeEEecCCCCCeEEEEEEccCCCeEEEEEe--CCCcEEEEeC--CCCCceeEE
Q 008196 2 YNCKDEHLASISLSGDLILHNLAS-GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG--DDGTLHLWDT--TGRSPKVSW 76 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~T-g~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS--~DGtVrLWDl--~~~~~ll~t 76 (574)
|+|||++|++++ ++.|++||+.+ ++....+..+....+.+++|+|+++. |++++ .++.++||++ .+.. ...
T Consensus 49 ~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~l~~~~~~~~~--~~~ 124 (297)
T 2ojh_A 49 WSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGAL-YAISDKVEFGKSAIYLLPSTGGT--PRL 124 (297)
T ss_dssp ECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSE-EEEEECTTTSSCEEEEEETTCCC--CEE
T ss_pred ECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCE-EEEEEeCCCCcceEEEEECCCCc--eEE
Confidence 899999999986 88999999998 87766666665444477799999955 77776 4456666665 4432 334
Q ss_pred eccCCCCeEEEEEcCCCCEEE-EEEecC
Q 008196 77 LKQHSAPTAGISFSSDDKAVS-SLCWQR 103 (574)
Q Consensus 77 l~gH~~~VtSVaFSPDG~~La-S~sWD~ 103 (574)
+..+. .+.+++|+||++.|+ ++..+.
T Consensus 125 ~~~~~-~~~~~~~spdg~~l~~~~~~~~ 151 (297)
T 2ojh_A 125 MTKNL-PSYWHGWSPDGKSFTYCGIRDQ 151 (297)
T ss_dssp CCSSS-SEEEEEECTTSSEEEEEEEETT
T ss_pred eecCC-CccceEECCCCCEEEEEECCCC
Confidence 44444 489999999999888 454443
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.72 E-value=1.8e-07 Score=97.74 Aligned_cols=106 Identities=18% Similarity=0.246 Sum_probs=76.6
Q ss_pred ccCCCCEEE-EEeCCCc--EEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCC--cEEEEeCCCCCceeEE
Q 008196 2 YNCKDEHLA-SISLSGD--LILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDTTGRSPKVSW 76 (574)
Q Consensus 2 FSpDG~~LA-SGS~DGt--VrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DG--tVrLWDl~~~~~ll~t 76 (574)
|+|||++|+ +++.|+. |++||+.+++. ..+..|...+ .+++|+|||+.+++++..++ .|.+||+.+.. ...
T Consensus 230 ~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~-~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~--~~~ 305 (415)
T 2hqs_A 230 FSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNN-TEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA--PQR 305 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCE-EEEEECTTSSEEEEEECTTSSCEEEEEETTSSC--CEE
T ss_pred EcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcc-cceEECCCCCEEEEEECCCCCcEEEEEECCCCC--EEE
Confidence 899999888 6666655 99999988776 5666666555 77799999966444444456 56677886643 234
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEEecCC-cCEEEec
Q 008196 77 LKQHSAPTAGISFSSDDKAVSSLCWQRA-KPVFIDE 111 (574)
Q Consensus 77 l~gH~~~VtSVaFSPDG~~LaS~sWD~s-g~viv~e 111 (574)
+..|...+.+++|+|||++|+.++.+.. ..+.+++
T Consensus 306 l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d 341 (415)
T 2hqs_A 306 ITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQD 341 (415)
T ss_dssp CCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEE
T ss_pred EecCCCcccCeEECCCCCEEEEEECcCCceEEEEEE
Confidence 5667778999999999999998876532 3444444
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.71 E-value=1e-07 Score=104.90 Aligned_cols=97 Identities=15% Similarity=0.129 Sum_probs=75.9
Q ss_pred ccCCCCEEEEEeC-CC-----cEEEEECCCCceeEEecCCCCC-----------------------eEEEEEEccCCCeE
Q 008196 2 YNCKDEHLASISL-SG-----DLILHNLASGAKAAELKDPNEQ-----------------------VLRVLDYSRNSRHL 52 (574)
Q Consensus 2 FSpDG~~LASGS~-DG-----tVrIWDl~Tg~~l~t~~gh~~~-----------------------Vvs~LafSPdGr~L 52 (574)
|+|||++|++++. |+ .|++||+.+++....+..+... .+..++|+|||+.
T Consensus 44 ~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~- 122 (741)
T 2ecf_A 44 VAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQR- 122 (741)
T ss_dssp ECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSE-
T ss_pred EecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCE-
Confidence 8999999999998 88 8999999999877666543322 1356699999965
Q ss_pred EEEEeCCCcEEEEeCCCCC-ceeEEeccCCCCeEEEEEcCCCCEEEEEE
Q 008196 53 LVTAGDDGTLHLWDTTGRS-PKVSWLKQHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 53 LaSgS~DGtVrLWDl~~~~-~ll~tl~gH~~~VtSVaFSPDG~~LaS~s 100 (574)
|++++. +.|++||+.+.. .....+..|...+.+++|+|||++|+.++
T Consensus 123 l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~ 170 (741)
T 2ecf_A 123 LLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR 170 (741)
T ss_dssp EEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe
Confidence 666655 999999997641 02235677888899999999999999876
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.70 E-value=2.2e-07 Score=91.11 Aligned_cols=98 Identities=13% Similarity=0.141 Sum_probs=74.3
Q ss_pred CccCCCCE-EEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 1 MYNCKDEH-LASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 1 ~FSpDG~~-LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
+|..++++ +++++.++.|.+||+.+++.+..+..+...+ +++|+|+|+.+++++..++.|.+||+.+.......+..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~--~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV--DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE--EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc--eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 57777765 6677889999999999999988887554444 77999999776666666999999999775443555666
Q ss_pred CCCCeEEEEEcCCCCEEEEEE
Q 008196 80 HSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 80 H~~~VtSVaFSPDG~~LaS~s 100 (574)
+..++.+++|+|+|++|++..
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~ 102 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVT 102 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECC
T ss_pred CCCCccceEECCCCCEEEEec
Confidence 776666699999999998443
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.63 E-value=1.1e-06 Score=85.94 Aligned_cols=107 Identities=9% Similarity=0.056 Sum_probs=77.2
Q ss_pred ccCCCCEEEEEeCCC---cEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCc-EEEEeCCCCCcee---
Q 008196 2 YNCKDEHLASISLSG---DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT-LHLWDTTGRSPKV--- 74 (574)
Q Consensus 2 FSpDG~~LASGS~DG---tVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGt-VrLWDl~~~~~ll--- 74 (574)
|++||++|+++..++ .|.+||+.+++.+..+..+ ..+ .+++|+|+|+++++++..++. |.+|++.......
T Consensus 91 ~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~-~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~ 168 (331)
T 3u4y_A 91 ITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDA-VGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG 168 (331)
T ss_dssp ECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTE-EEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE
T ss_pred ECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCc-cceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC
Confidence 789999999555553 8999999999888877743 344 677999999877778788788 9999996433321
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 75 SWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 75 ~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.....+...+.+++|+|||++|+...+.. +.+.+++
T Consensus 169 ~~~~~~~~~~~~~~~spdg~~l~v~~~~~-~~v~v~d 204 (331)
T 3u4y_A 169 QEFISGGTRPFNITFTPDGNFAFVANLIG-NSIGILE 204 (331)
T ss_dssp EEEECSSSSEEEEEECTTSSEEEEEETTT-TEEEEEE
T ss_pred CccccCCCCccceEECCCCCEEEEEeCCC-CeEEEEE
Confidence 11223345689999999999887766443 3343333
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.62 E-value=2.2e-07 Score=101.50 Aligned_cols=104 Identities=15% Similarity=0.189 Sum_probs=82.1
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeC--CCCCceeEEecc
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT--TGRSPKVSWLKQ 79 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl--~~~~~ll~tl~g 79 (574)
|++++.++++++.|+.|.+||..+++++..+..++. + .+++|+|||+ +|++++.|++|++||+ .+. ..+..+.
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~-~~v~~spdg~-~l~v~~~d~~V~v~D~~~~t~-~~~~~i~- 219 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-V-HISRMSASGR-YLLVIGRDARIDMIDLWAKEP-TKVAEIK- 219 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-E-EEEEECTTSC-EEEEEETTSEEEEEETTSSSC-EEEEEEE-
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-c-ceEEECCCCC-EEEEECCCCeEEEEECcCCCC-cEEEEEe-
Confidence 678888999999999999999999999999985444 4 7889999994 5888899999999999 553 3344454
Q ss_pred CCCCeEEEEEcC----CCCEEEEEEecCCcCEEEe
Q 008196 80 HSAPTAGISFSS----DDKAVSSLCWQRAKPVFID 110 (574)
Q Consensus 80 H~~~VtSVaFSP----DG~~LaS~sWD~sg~viv~ 110 (574)
+...+++++|+| ||++|+++++......+++
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D 254 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMD 254 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEE
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEe
Confidence 445689999999 9999999875433333343
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.61 E-value=8.1e-07 Score=87.19 Aligned_cols=106 Identities=12% Similarity=0.046 Sum_probs=78.3
Q ss_pred ccCCCCEEEEEe--CCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEec-
Q 008196 2 YNCKDEHLASIS--LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK- 78 (574)
Q Consensus 2 FSpDG~~LASGS--~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~- 78 (574)
|+++|++++.++ .++.|.+||+.+++.+..+..+...+ .+++|+|+|+. |+.++.++.|.+||+.+.... ..+.
T Consensus 148 ~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~s~dg~~-l~~~~~~~~i~~~d~~~~~~~-~~~~~ 224 (353)
T 3vgz_A 148 ADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMS-TGLALDSEGKR-LYTTNADGELITIDTADNKIL-SRKKL 224 (353)
T ss_dssp EETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTC-CCCEEETTTTE-EEEECTTSEEEEEETTTTEEE-EEEEC
T ss_pred ECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCcc-ceEEECCCCCE-EEEEcCCCeEEEEECCCCeEE-EEEEc
Confidence 788999877776 48899999999999888887444445 56699999955 777778999999999764332 2332
Q ss_pred ---cCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 79 ---QHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 79 ---gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
++...+.+++|+|++++|+....+. +.+.+++
T Consensus 225 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~v~~~d 259 (353)
T 3vgz_A 225 LDDGKEHFFINISLDTARQRAFITDSKA-AEVLVVD 259 (353)
T ss_dssp CCSSSCCCEEEEEEETTTTEEEEEESSS-SEEEEEE
T ss_pred CCCCCCcccceEEECCCCCEEEEEeCCC-CEEEEEE
Confidence 2555688999999999888776443 3344433
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.61 E-value=7.7e-08 Score=105.36 Aligned_cols=105 Identities=9% Similarity=0.075 Sum_probs=78.1
Q ss_pred CccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCC---CeEEEEEEccCCCeEEEEEeCC---------CcEEEEeCC
Q 008196 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNE---QVLRVLDYSRNSRHLLVTAGDD---------GTLHLWDTT 68 (574)
Q Consensus 1 ~FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~---~Vvs~LafSPdGr~LLaSgS~D---------GtVrLWDl~ 68 (574)
.|+|||+++++ +.||.|++||+.++++...+..|.. .+ ..++|+|||++ |++++.+ +.|++||+.
T Consensus 23 ~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v-~~~~~SpDg~~-l~~~~~~~~~~~~~~~~~i~~~d~~ 99 (723)
T 1xfd_A 23 KWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRA-IRYEISPDREY-ALFSYNVEPIYQHSYTGYYVLSKIP 99 (723)
T ss_dssp CBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTC-SEEEECTTSSE-EEEEESCCCCSSSCCCSEEEEEESS
T ss_pred EEcCCCcEEEE-eCCCCEEEEECCCCcEEEEecccccccccc-ceEEECCCCCE-EEEEecCccceeecceeeEEEEECC
Confidence 48999998877 7899999999999988877776653 25 66799999965 6666654 788899997
Q ss_pred CCCce-eEEeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 69 GRSPK-VSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 69 ~~~~l-l~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
+.... +....+|...+.+++|||||+.|+.++. ..+++++
T Consensus 100 ~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~---~~i~~~~ 140 (723)
T 1xfd_A 100 HGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE---NNIYYCA 140 (723)
T ss_dssp SCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET---TEEEEES
T ss_pred CCceEeccCCccccccccccEECCCCCEEEEEEC---CeEEEEE
Confidence 64432 2223345556899999999999998763 3444444
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.61 E-value=2e-07 Score=108.37 Aligned_cols=98 Identities=14% Similarity=0.199 Sum_probs=81.3
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCC----------CcEEEEeCCCCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD----------GTLHLWDTTGRS 71 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~D----------GtVrLWDl~~~~ 71 (574)
|+|||++||+++.|+.|++||+.+++....+.+|.+.+ ..++|+|||++ |+.++.+ +.|++||+.+..
T Consensus 386 ~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v-~~~~~SpDG~~-la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 386 VDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI-TDFTISDNSRF-IAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCC-CCEEECTTSCE-EEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred ECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCc-cceEECCCCCe-EEEEecCccccccCCCCCeEEEEECCCCc
Confidence 89999999999999999999999998877776777666 66699999966 5555443 489999997743
Q ss_pred ceeEEeccCCCCeEEEEEcCCCCEEEEEEecC
Q 008196 72 PKVSWLKQHSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 72 ~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
...+..|...+.+++|+|||++|+..+.+.
T Consensus 464 --~~~l~~~~~~~~~~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 464 --IFAATTENSHDYAPAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp --EEECSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred --EEEeeCCCcccCCceEcCCCCEEEEEeccc
Confidence 556788888899999999999999877543
No 140
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.59 E-value=2.8e-07 Score=90.13 Aligned_cols=99 Identities=13% Similarity=0.074 Sum_probs=76.8
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCC-CeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEec-c
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNE-QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-Q 79 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~-~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~-g 79 (574)
|+++++++++++.++.|++||+.+++.+..+..+.. .+ ..++|+|+|+.+++++..++.|.+||+.+... +..+. .
T Consensus 7 ~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~-~~~~~~~ 84 (349)
T 1jmx_B 7 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGP-GTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN-TFHANLS 84 (349)
T ss_dssp CCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSS-CEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEESC
T ss_pred ccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCC-ceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE-EEEEEcc
Confidence 678888999999999999999999998888875541 34 56699999977777888899999999976433 22333 2
Q ss_pred C-----CCCeEEEEEcCCCCEEEEEEec
Q 008196 80 H-----SAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 80 H-----~~~VtSVaFSPDG~~LaS~sWD 102 (574)
+ ...+.+++|+|||++|+++..+
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~ 112 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNP 112 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEE
T ss_pred cccccccccccceEECCCCCEEEEEccc
Confidence 2 2237889999999999987744
No 141
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.55 E-value=8e-08 Score=103.38 Aligned_cols=97 Identities=13% Similarity=0.082 Sum_probs=77.4
Q ss_pred ccCCCCEEEEEeCC----CcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCC--cEEEEeCCCCCceeE
Q 008196 2 YNCKDEHLASISLS----GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDTTGRSPKVS 75 (574)
Q Consensus 2 FSpDG~~LASGS~D----GtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DG--tVrLWDl~~~~~ll~ 75 (574)
|+|||++||+++.| +.|++||+.+++.. .+..|.+.+ ..++|+|||+. |+++..|+ .|++||+.+....
T Consensus 157 ~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~-~~~~~SpDG~~-l~~~~~~~~~~i~~~d~~~~~~~-- 231 (582)
T 3o4h_A 157 SDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSF-SSASISPGMKV-TAGLETAREARLVTVDPRDGSVE-- 231 (582)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEE-EEEEECTTSCE-EEEEECSSCEEEEEECTTTCCEE--
T ss_pred ECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCcc-ccceECCCCCE-EEEccCCCeeEEEEEcCCCCcEE--
Confidence 78999999988877 78999999888754 666666555 77799999965 66888888 8999999775433
Q ss_pred EeccCCCCeEEEE--------EcCCCCEEEEEEecC
Q 008196 76 WLKQHSAPTAGIS--------FSSDDKAVSSLCWQR 103 (574)
Q Consensus 76 tl~gH~~~VtSVa--------FSPDG~~LaS~sWD~ 103 (574)
.+.+|...|.+++ |+|||.++++...+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 232 DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG 267 (582)
T ss_dssp ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT
T ss_pred EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC
Confidence 6677877777777 999997777776554
No 142
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.53 E-value=8.2e-07 Score=88.89 Aligned_cols=100 Identities=12% Similarity=0.206 Sum_probs=70.8
Q ss_pred CccCCCCEEEEEe-CCCcEEEEECCCCce--eEEecC---CCCCeEEEEEEccCCCeEEEEEeC-CCcEEEEeCC--CCC
Q 008196 1 MYNCKDEHLASIS-LSGDLILHNLASGAK--AAELKD---PNEQVLRVLDYSRNSRHLLVTAGD-DGTLHLWDTT--GRS 71 (574)
Q Consensus 1 ~FSpDG~~LASGS-~DGtVrIWDl~Tg~~--l~t~~g---h~~~Vvs~LafSPdGr~LLaSgS~-DGtVrLWDl~--~~~ 71 (574)
.|+|||++|+.++ .++.|.+||+.++.. +..+.. +...+ ..++|+|||++++++... ++.|.+|++. ...
T Consensus 217 ~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~-~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~ 295 (361)
T 3scy_A 217 IFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGS-GDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT 295 (361)
T ss_dssp EECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCE-EEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC
T ss_pred EEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCc-ccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc
Confidence 3899999888777 699999999987754 233322 22334 677999999765565555 6999999995 222
Q ss_pred c-eeEEeccCCCCeEEEEEcCCCCEEEEEEec
Q 008196 72 P-KVSWLKQHSAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 72 ~-ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD 102 (574)
. .+..+.. ...+.+++|+|||++|+++..+
T Consensus 296 ~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 296 LTKVGYQLT-GIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp EEEEEEEEC-SSCCCEEEECTTSCEEEEEETT
T ss_pred EEEeeEecC-CCCCceEEECCCCCEEEEEECC
Confidence 1 2223333 4568899999999999888743
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.53 E-value=1.8e-06 Score=84.73 Aligned_cols=107 Identities=7% Similarity=0.018 Sum_probs=80.7
Q ss_pred ccCCCCEEEEEeC-------CCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCcee
Q 008196 2 YNCKDEHLASISL-------SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (574)
Q Consensus 2 FSpDG~~LASGS~-------DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll 74 (574)
|+++|++|++++. ++.|.+||..+++.+..+.... .+ ..++|+|+|+++++++..++.|.+||+.+... +
T Consensus 48 ~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~-~ 124 (353)
T 3vgz_A 48 YSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-KP-FGATINNTTQTLWFGNTVNSAVTAIDAKTGEV-K 124 (353)
T ss_dssp EETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-CC-CSEEEETTTTEEEEEETTTTEEEEEETTTCCE-E
T ss_pred ECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-Cc-ceEEECCCCCEEEEEecCCCEEEEEeCCCCee-E
Confidence 7899998888874 5689999999999888877433 33 45699999977788888899999999976443 3
Q ss_pred EEeccCCC---------CeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 75 SWLKQHSA---------PTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 75 ~tl~gH~~---------~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..+..+.. .+.+++|+|++++++...+...+.+.+.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d 170 (353)
T 3vgz_A 125 GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVD 170 (353)
T ss_dssp EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEE
T ss_pred EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEc
Confidence 33433322 27899999999999988876555555554
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.49 E-value=4.8e-07 Score=88.03 Aligned_cols=96 Identities=14% Similarity=0.093 Sum_probs=70.0
Q ss_pred ccCCCCEEEEEeCC-CcEEEEECC--CCce--eEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCC--Ccee
Q 008196 2 YNCKDEHLASISLS-GDLILHNLA--SGAK--AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR--SPKV 74 (574)
Q Consensus 2 FSpDG~~LASGS~D-GtVrIWDl~--Tg~~--l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~--~~ll 74 (574)
|+++|++|++++.+ +.|++|++. ++.. +..+..+. .+ ..++|+|+++.+++++..++.|++||+... ....
T Consensus 45 ~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~ 122 (343)
T 1ri6_A 45 VSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SL-THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV 122 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CC-SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEE
T ss_pred ECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CC-cEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccc
Confidence 79999999998876 999999997 5553 34454433 44 667999999766666666999999999311 1223
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEE
Q 008196 75 SWLKQHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 75 ~tl~gH~~~VtSVaFSPDG~~LaS~s 100 (574)
..+..+ ..+.+++|+|++++|++++
T Consensus 123 ~~~~~~-~~~~~~~~s~dg~~l~~~~ 147 (343)
T 1ri6_A 123 DVVEGL-DGCHSANISPDNRTLWVPA 147 (343)
T ss_dssp EEECCC-TTBCCCEECTTSSEEEEEE
T ss_pred ccccCC-CCceEEEECCCCCEEEEec
Confidence 333443 3589999999999888876
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.49 E-value=1.6e-06 Score=83.98 Aligned_cols=93 Identities=12% Similarity=0.019 Sum_probs=70.9
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEecCCCC--CeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC----
Q 008196 7 EHLASISLSGDLILHNLASGAKAAELKDPNE--QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH---- 80 (574)
Q Consensus 7 ~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~--~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH---- 80 (574)
++|++++.++.|.+||+.+++.+..+..... .+ ..++|+|+|+.+++++..++.|.+||+.+.........++
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTP-MVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCC-CCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCc-cceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence 5899999999999999999998888774332 24 5669999998877888889999999997644332222222
Q ss_pred CCCeEEEEEcCCCCEEEEEE
Q 008196 81 SAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~LaS~s 100 (574)
...+.+++|+|+|++|+++.
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~ 100 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYE 100 (337)
T ss_dssp EECTTCEEECTTSSEEEEEE
T ss_pred cccccceEECCCCCEEEEEe
Confidence 22577899999999888874
No 146
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.48 E-value=6.6e-07 Score=100.04 Aligned_cols=103 Identities=10% Similarity=0.169 Sum_probs=77.6
Q ss_pred CccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeE----EEEEEccCCCeEEEEEeCC---------CcEEEEeC
Q 008196 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVL----RVLDYSRNSRHLLVTAGDD---------GTLHLWDT 67 (574)
Q Consensus 1 ~FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vv----s~LafSPdGr~LLaSgS~D---------GtVrLWDl 67 (574)
.|++||++|+++ |+.|++||+.++++...+.+|....+ ..++|||||++ |+.++.+ +.+.+||+
T Consensus 23 ~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~-l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 23 RWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQF-ILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp EECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSE-EEEEEEEEECSSSCEEEEEEEEET
T ss_pred EECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCE-EEEEECCeeeEEEccceEEEEEEC
Confidence 388999999997 99999999999998877787754321 22589999965 6666655 56679999
Q ss_pred CCCCceeEEeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 68 TGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 68 ~~~~~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.+.. ...+..|...+..++|||||+.|+.+. + ..+++++
T Consensus 100 ~~~~--~~~l~~~~~~~~~~~~SPdG~~la~~~-~--~~i~~~~ 138 (740)
T 4a5s_A 100 NKRQ--LITEERIPNNTQWVTWSPVGHKLAYVW-N--NDIYVKI 138 (740)
T ss_dssp TTTE--ECCSSCCCTTEEEEEECSSTTCEEEEE-T--TEEEEES
T ss_pred CCCc--EEEcccCCCcceeeEECCCCCEEEEEE-C--CeEEEEE
Confidence 7753 234677888899999999999998864 3 3444444
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.46 E-value=2.2e-06 Score=85.08 Aligned_cols=102 Identities=12% Similarity=0.089 Sum_probs=73.4
Q ss_pred ccCCCCEEEE-EeCCCcEEEEECCC--Cce--eEEecCCCC-----CeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCC-
Q 008196 2 YNCKDEHLAS-ISLSGDLILHNLAS--GAK--AAELKDPNE-----QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR- 70 (574)
Q Consensus 2 FSpDG~~LAS-GS~DGtVrIWDl~T--g~~--l~t~~gh~~-----~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~- 70 (574)
|+|||++|+. +..++.|.+|++.. ++. +..+..... .....++|+|||+++++++..++.|.+||+...
T Consensus 194 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g 273 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG 273 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC
Confidence 8999996665 55789999999874 443 223332221 234778999999777788888999999999622
Q ss_pred -CceeEEeccCCCCeEEEEEcCCCCEEEEEEecC
Q 008196 71 -SPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 71 -~~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
...+..+..|...+.+++|+|||++|+++..+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 307 (347)
T 3hfq_A 274 HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNT 307 (347)
T ss_dssp CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTT
T ss_pred cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCC
Confidence 123444556666789999999999999887553
No 148
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.45 E-value=9.5e-07 Score=85.88 Aligned_cols=107 Identities=12% Similarity=0.104 Sum_probs=71.8
Q ss_pred ccCCCCEEEEEeC-CCcEEEEECC---CCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCC-CCcee-E
Q 008196 2 YNCKDEHLASISL-SGDLILHNLA---SGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG-RSPKV-S 75 (574)
Q Consensus 2 FSpDG~~LASGS~-DGtVrIWDl~---Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~-~~~ll-~ 75 (574)
|+++|++|++++. ++.|.+||+. .+..+..+..+. .+ .+++|+|+|+.+++++..|+.|++||+.. ..... .
T Consensus 91 ~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~-~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 168 (343)
T 1ri6_A 91 TDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD-GC-HSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQD 168 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT-TB-CCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEE
T ss_pred EcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC-Cc-eEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeec
Confidence 7899998877664 8899999994 334455554333 34 66799999976555554899999999965 32211 1
Q ss_pred --Eec-cCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 76 --WLK-QHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 76 --tl~-gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
... .....+.+++|+|++++|+..... .+.+.+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-~~~i~~~~ 206 (343)
T 1ri6_A 169 PAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-NSSVDVWE 206 (343)
T ss_dssp EEEEECSTTCCEEEEEECTTSSEEEEEETT-TTEEEEEE
T ss_pred ccccccCCCCCcceEEECCCCCEEEEEeCC-CCEEEEEE
Confidence 122 234578899999999988776532 33444443
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.44 E-value=5.3e-07 Score=98.69 Aligned_cols=99 Identities=10% Similarity=0.125 Sum_probs=71.6
Q ss_pred ccCCCCEEEEEeCC---------CcEEEEECCCCceeEEecC---CCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCC
Q 008196 2 YNCKDEHLASISLS---------GDLILHNLASGAKAAELKD---PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG 69 (574)
Q Consensus 2 FSpDG~~LASGS~D---------GtVrIWDl~Tg~~l~t~~g---h~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~ 69 (574)
|+|||++|++++.+ +.|.|||+.+++. ..+.. |...+ ..++|+|||+. |+.++. +.|++||+.+
T Consensus 68 ~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~-~~~~~SPdG~~-la~~~~-~~i~~~~~~~ 143 (723)
T 1xfd_A 68 ISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKL-QYAGWGPKGQQ-LIFIFE-NNIYYCAHVG 143 (723)
T ss_dssp ECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCC-SBCCBCSSTTC-EEEEET-TEEEEESSSS
T ss_pred ECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccc-cccEECCCCCE-EEEEEC-CeEEEEECCC
Confidence 89999999999875 7888999988876 34432 22234 55699999966 666654 7999999976
Q ss_pred CCceeEEeccCCCC------------------eEEEEEcCCCCEEEEEEecCCc
Q 008196 70 RSPKVSWLKQHSAP------------------TAGISFSSDDKAVSSLCWQRAK 105 (574)
Q Consensus 70 ~~~ll~tl~gH~~~------------------VtSVaFSPDG~~LaS~sWD~sg 105 (574)
.... .....+... +.+++|+|||+.|+++..+...
T Consensus 144 g~~~-~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~ 196 (723)
T 1xfd_A 144 KQAI-RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSR 196 (723)
T ss_dssp SCCE-EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTT
T ss_pred CceE-EEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCc
Confidence 4333 223333332 3789999999999998877543
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.44 E-value=1.3e-06 Score=101.54 Aligned_cols=98 Identities=12% Similarity=0.127 Sum_probs=78.6
Q ss_pred CccCCCCEEEEEeCCCcEE-EEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 1 MYNCKDEHLASISLSGDLI-LHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 1 ~FSpDG~~LASGS~DGtVr-IWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
.|+ ||+.|+.++.++.|. +||+..++. ..+.+|...+ ..++|+|||+ +|++++.|+.|++||+.+.. ......+
T Consensus 344 ~~s-dg~~l~~~s~~~~l~~~~d~~~~~~-~~l~~~~~~~-~~~~~SpDG~-~la~~~~~~~v~~~d~~tg~-~~~~~~~ 418 (1045)
T 1k32_A 344 GGD-TKVAFIHGTREGDFLGIYDYRTGKA-EKFEENLGNV-FAMGVDRNGK-FAVVANDRFEIMTVDLETGK-PTVIERS 418 (1045)
T ss_dssp CSS-SEEEEEEEETTEEEEEEEETTTCCE-EECCCCCCSE-EEEEECTTSS-EEEEEETTSEEEEEETTTCC-EEEEEEC
T ss_pred eEc-CCCeEEEEECCCceEEEEECCCCCc-eEecCCccce-eeeEECCCCC-EEEEECCCCeEEEEECCCCc-eEEeccC
Confidence 378 999999999988898 999977664 4455555556 7779999995 58889999999999997643 3334558
Q ss_pred CCCCeEEEEEcCCCCEEEEEEecC
Q 008196 80 HSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 80 H~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
|...|.+++|+|||++|++++.+.
T Consensus 419 ~~~~v~~~~~SpDG~~la~~~~~~ 442 (1045)
T 1k32_A 419 REAMITDFTISDNSRFIAYGFPLK 442 (1045)
T ss_dssp SSSCCCCEEECTTSCEEEEEEEEC
T ss_pred CCCCccceEECCCCCeEEEEecCc
Confidence 888999999999999999887654
No 151
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.43 E-value=1.4e-06 Score=95.05 Aligned_cols=109 Identities=9% Similarity=0.004 Sum_probs=82.4
Q ss_pred ccC----CCCEEEEEe-CCCcEEEEECCCCceeEEecCC----------CCCeEEEEEEccCCCeEEEEEeCCCcEEEEe
Q 008196 2 YNC----KDEHLASIS-LSGDLILHNLASGAKAAELKDP----------NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWD 66 (574)
Q Consensus 2 FSp----DG~~LASGS-~DGtVrIWDl~Tg~~l~t~~gh----------~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWD 66 (574)
|+| ||++|++++ .+++|.|||..+++++..+..+ ....+..+.|+|+++.++++...++.|.+||
T Consensus 229 ~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd 308 (543)
T 1nir_A 229 SSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVN 308 (543)
T ss_dssp ECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred eCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEE
Confidence 788 999999998 5899999999999998888642 2323367799999889999999999999999
Q ss_pred CCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEe
Q 008196 67 TTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFID 110 (574)
Q Consensus 67 l~~~~~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~ 110 (574)
+.....+......+...+++++|+|+|++|++++.......+++
T Consensus 309 ~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D 352 (543)
T 1nir_A 309 YKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVID 352 (543)
T ss_dssp CTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred ecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEE
Confidence 96533332223346667899999999999887664333333333
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.41 E-value=7e-07 Score=98.22 Aligned_cols=97 Identities=13% Similarity=0.130 Sum_probs=70.4
Q ss_pred ccCCCCEEEEEeC---------CCcEEEEECCCCcee--EEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCC
Q 008196 2 YNCKDEHLASISL---------SGDLILHNLASGAKA--AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR 70 (574)
Q Consensus 2 FSpDG~~LASGS~---------DGtVrIWDl~Tg~~l--~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~ 70 (574)
|+|||++||+++. |+.|+|||+.+++.+ ..+. ..+ ..++|+|||+. |+.+. |+.|++||+.+.
T Consensus 67 ~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~---~~~-~~~~~SPDG~~-la~~~-~~~i~~~~~~~g 140 (719)
T 1z68_A 67 LSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP---RPI-QYLCWSPVGSK-LAYVY-QNNIYLKQRPGD 140 (719)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC---SSB-CCEEECSSTTC-EEEEE-TTEEEEESSTTS
T ss_pred ECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC---ccc-ccceECCCCCE-EEEEE-CCeEEEEeCCCC
Confidence 8999999999876 799999999888763 2222 334 55699999976 56554 789999999654
Q ss_pred CceeEEeccCCCCe-----------------EEEEEcCCCCEEEEEEecCC
Q 008196 71 SPKVSWLKQHSAPT-----------------AGISFSSDDKAVSSLCWQRA 104 (574)
Q Consensus 71 ~~ll~tl~gH~~~V-----------------tSVaFSPDG~~LaS~sWD~s 104 (574)
........++...| .+++|+|||++|++++.|..
T Consensus 141 ~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~ 191 (719)
T 1z68_A 141 PPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDT 191 (719)
T ss_dssp CCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECT
T ss_pred CcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCC
Confidence 33321223333322 48999999999999887753
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.40 E-value=3.5e-06 Score=83.60 Aligned_cols=100 Identities=12% Similarity=0.031 Sum_probs=69.2
Q ss_pred ccCCCCEEEEEeCCCcEEEEECC-CCcee--EEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCC--CCc-eeE
Q 008196 2 YNCKDEHLASISLSGDLILHNLA-SGAKA--AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG--RSP-KVS 75 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~-Tg~~l--~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~--~~~-ll~ 75 (574)
|+|||++++++..++.|.+||+. ++... ..+..+.+.-...++|+|||+++++++..++.|++||+.. ... .+.
T Consensus 148 ~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~ 227 (347)
T 3hfq_A 148 LTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLG 227 (347)
T ss_dssp ECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEE
T ss_pred ECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEee
Confidence 78999977777778999999998 45432 2333333333367899999977777788899999999853 211 122
Q ss_pred EeccCC------CCeEEEEEcCCCCEEEEEEe
Q 008196 76 WLKQHS------APTAGISFSSDDKAVSSLCW 101 (574)
Q Consensus 76 tl~gH~------~~VtSVaFSPDG~~LaS~sW 101 (574)
.+..+. ..+.+++|+|||++|+....
T Consensus 228 ~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~ 259 (347)
T 3hfq_A 228 IVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR 259 (347)
T ss_dssp EEESSCTTCCSCCEEEEEEECTTSCEEEEEEE
T ss_pred eeeecCCCCCCCCcceeEEECCCCCEEEEEeC
Confidence 222222 34889999999998866553
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.38 E-value=9e-07 Score=97.36 Aligned_cols=101 Identities=14% Similarity=0.225 Sum_probs=72.3
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCC---CeEEEEEEccCCCeEEEEEeC---------CCcEEEEeCCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNE---QVLRVLDYSRNSRHLLVTAGD---------DGTLHLWDTTG 69 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~---~Vvs~LafSPdGr~LLaSgS~---------DGtVrLWDl~~ 69 (574)
|++||++++++ .|+.|++||+.++++...+..+.. .+ ..++|+|||+. |+.++. |+.|++||+.+
T Consensus 23 ~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~SpDg~~-la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 23 WISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNA-SNYGLSPDRQF-VYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp ESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTC-SEEEECTTSSE-EEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccce-eeEEECCCCCe-EEEEecCceeEEeecceEEEEEECCC
Confidence 88999766655 699999999999988766664432 24 56699999965 666554 78999999976
Q ss_pred CCcee-EEeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 70 RSPKV-SWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 70 ~~~ll-~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..... ..+ ...+.+++|||||+.|+.+. + +.+.+++
T Consensus 100 g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~--~~i~~~~ 136 (719)
T 1z68_A 100 GEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-Q--NNIYLKQ 136 (719)
T ss_dssp TEECCSSCC---CSSBCCEEECSSTTCEEEEE-T--TEEEEES
T ss_pred Cccccceec---CcccccceECCCCCEEEEEE-C--CeEEEEe
Confidence 43210 112 24688999999999999874 2 3455554
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.36 E-value=5.9e-06 Score=82.64 Aligned_cols=110 Identities=14% Similarity=0.072 Sum_probs=71.5
Q ss_pred ccCCCCEEEEEe-CCCcEEEEECCCCce------e------EEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCC
Q 008196 2 YNCKDEHLASIS-LSGDLILHNLASGAK------A------AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT 68 (574)
Q Consensus 2 FSpDG~~LASGS-~DGtVrIWDl~Tg~~------l------~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~ 68 (574)
|+|||++|+.++ .++.|.+|++..... + ..+....+.-...++|+|+|+.+++++..++.|.+||+.
T Consensus 162 ~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~ 241 (361)
T 3scy_A 162 ITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA 241 (361)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec
Confidence 799999776655 588999999875431 1 122222333237789999997655555579999999996
Q ss_pred CCCc-eeEE---eccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 69 GRSP-KVSW---LKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 69 ~~~~-ll~t---l~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.... .+.. ...+...+.+++|+|||++|++...+..+.+.+++
T Consensus 242 ~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 242 DGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp TTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 4322 1222 23344567899999999999877644133444433
No 156
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.28 E-value=8.4e-06 Score=82.67 Aligned_cols=102 Identities=7% Similarity=0.059 Sum_probs=69.5
Q ss_pred CccCCCCE--EEEEe-------------CCCcEEEEECC-CCceeEEecC---CCCCeEEEEEEccCCCeEEEEEeCCCc
Q 008196 1 MYNCKDEH--LASIS-------------LSGDLILHNLA-SGAKAAELKD---PNEQVLRVLDYSRNSRHLLVTAGDDGT 61 (574)
Q Consensus 1 ~FSpDG~~--LASGS-------------~DGtVrIWDl~-Tg~~l~t~~g---h~~~Vvs~LafSPdGr~LLaSgS~DGt 61 (574)
.|+|||++ ++++. .++.+.+|++. .|+....+.. .......+++|+|||++++++...++.
T Consensus 89 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~ 168 (365)
T 1jof_A 89 DADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANK 168 (365)
T ss_dssp CTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred EECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCE
Confidence 48899994 55553 68999999997 4665444331 122333778999999664444445789
Q ss_pred EEEEeCC-CCCce-eEEec--cCCCCeEEEEEcCCCCEEEEEEec
Q 008196 62 LHLWDTT-GRSPK-VSWLK--QHSAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 62 VrLWDl~-~~~~l-l~tl~--gH~~~VtSVaFSPDG~~LaS~sWD 102 (574)
|++||+. +.... +..+. .|...+..++|+|||++|++..+.
T Consensus 169 v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~ 213 (365)
T 1jof_A 169 LWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA 213 (365)
T ss_dssp EEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECC
Confidence 9999996 43322 22232 345679999999999999887643
No 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.28 E-value=9.2e-06 Score=88.96 Aligned_cols=107 Identities=11% Similarity=0.109 Sum_probs=80.0
Q ss_pred ccC--CCCEEEEEeCCCcEEEEECC-CCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCC----cEEEEeCCCCCcee
Q 008196 2 YNC--KDEHLASISLSGDLILHNLA-SGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG----TLHLWDTTGRSPKV 74 (574)
Q Consensus 2 FSp--DG~~LASGS~DGtVrIWDl~-Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DG----tVrLWDl~~~~~ll 74 (574)
|+| ||++|++++.|+.++||++. ++..+..+..+...+..+++|+|+|+.+++++..++ .|..||+.+.. .
T Consensus 317 ~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~--~ 394 (706)
T 2z3z_A 317 FLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK--T 394 (706)
T ss_dssp ECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC--C
T ss_pred eecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC--c
Confidence 788 99999999999999999886 677788888776667555799999988777777766 56666765533 2
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEEecCC--cCEEEec
Q 008196 75 SWLKQHSAPTAGISFSSDDKAVSSLCWQRA--KPVFIDE 111 (574)
Q Consensus 75 ~tl~gH~~~VtSVaFSPDG~~LaS~sWD~s--g~viv~e 111 (574)
..+ .|...+.+++|+|||++|+..+.+.. ..+.+++
T Consensus 395 ~~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 395 KDL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp EES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEE
T ss_pred eec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEE
Confidence 223 36677999999999999988765543 2344444
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.28 E-value=3.4e-06 Score=94.34 Aligned_cols=101 Identities=4% Similarity=-0.065 Sum_probs=73.6
Q ss_pred ccCCCCEEEEEeCC---------CcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCc
Q 008196 2 YNCKDEHLASISLS---------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (574)
Q Consensus 2 FSpDG~~LASGS~D---------GtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ 72 (574)
|||||++|+.++.+ +.+.|||+.++++. .+..+.+.+ ..++|||||+. |+.+ .|+.|++||+.+...
T Consensus 69 ~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~-~~~~~SPdG~~-la~~-~~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 69 ISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNT-QWVTWSPVGHK-LAYV-WNNDIYVKIEPNLPS 144 (740)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTE-EEEEECSSTTC-EEEE-ETTEEEEESSTTSCC
T ss_pred ECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcc-eeeEECCCCCE-EEEE-ECCeEEEEECCCCce
Confidence 69999999999876 56679999888754 456566666 66699999977 5555 578999999966443
Q ss_pred eeEEeccCCCCe-----------------EEEEEcCCCCEEEEEEecCCcC
Q 008196 73 KVSWLKQHSAPT-----------------AGISFSSDDKAVSSLCWQRAKP 106 (574)
Q Consensus 73 ll~tl~gH~~~V-----------------tSVaFSPDG~~LaS~sWD~sg~ 106 (574)
...+..++...+ ..+.|||||+.|+....|....
T Consensus 145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v 195 (740)
T 4a5s_A 145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEV 195 (740)
T ss_dssp EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTC
T ss_pred EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCC
Confidence 322233443333 3589999999999988776543
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.27 E-value=7.1e-06 Score=79.46 Aligned_cols=94 Identities=13% Similarity=0.158 Sum_probs=68.7
Q ss_pred ccCCCCEE-EEEeCCCcEEEEECCCCceeEEecCCC-----CCeEEEEEEccCCCeEEEEEe------------CCCcEE
Q 008196 2 YNCKDEHL-ASISLSGDLILHNLASGAKAAELKDPN-----EQVLRVLDYSRNSRHLLVTAG------------DDGTLH 63 (574)
Q Consensus 2 FSpDG~~L-ASGS~DGtVrIWDl~Tg~~l~t~~gh~-----~~Vvs~LafSPdGr~LLaSgS------------~DGtVr 63 (574)
|++||+++ +++..++.|.+||+.+++.+..+.... ..+ ..++|+|+|++ |++++ .++.|.
T Consensus 41 ~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~~~~i~ 118 (337)
T 1pby_B 41 VAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSL-FGAALSPDGKT-LAIYESPVRLELTHFEVQPTRVA 118 (337)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECT-TCEEECTTSSE-EEEEEEEEEECSSCEEECCCEEE
T ss_pred EcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccc-cceEECCCCCE-EEEEecccccccccccccCceEE
Confidence 78999865 455568999999999999887776422 133 45699999966 55554 579999
Q ss_pred EEeCCCCCceeEEeccCCCCeEEEEEcCCCCEEEEE
Q 008196 64 LWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSL 99 (574)
Q Consensus 64 LWDl~~~~~ll~tl~gH~~~VtSVaFSPDG~~LaS~ 99 (574)
+||+.+.. .+..+.. ...+.+++|+|+|++|+++
T Consensus 119 v~d~~~~~-~~~~~~~-~~~~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 119 LYDAETLS-RRKAFEA-PRQITMLAWARDGSKLYGL 152 (337)
T ss_dssp EEETTTTE-EEEEEEC-CSSCCCEEECTTSSCEEEE
T ss_pred EEECCCCc-EEEEEeC-CCCcceeEECCCCCEEEEe
Confidence 99997643 3333333 3457889999999988876
No 160
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.27 E-value=3.8e-06 Score=92.02 Aligned_cols=101 Identities=11% Similarity=0.126 Sum_probs=75.3
Q ss_pred ccCCCCEEEEEeCCC-----cEEEEECCCCceeEEec-CCCCC---eEEEEEEcc--CCCeEEEEEeCCCcEEEEeCCCC
Q 008196 2 YNCKDEHLASISLSG-----DLILHNLASGAKAAELK-DPNEQ---VLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGR 70 (574)
Q Consensus 2 FSpDG~~LASGS~DG-----tVrIWDl~Tg~~l~t~~-gh~~~---Vvs~LafSP--dGr~LLaSgS~DGtVrLWDl~~~ 70 (574)
|+|||++|++++.|+ .|++||+.+++.+..+. .+... .+..++|+| || .+|++++.|+.++||++...
T Consensus 265 ~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg-~~l~~~~~~g~~~l~~~~~~ 343 (706)
T 2z3z_A 265 WSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNN-QFIWQSRRDGWNHLYLYDTT 343 (706)
T ss_dssp ECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSS-EEEEEECTTSSCEEEEEETT
T ss_pred EECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCC-EEEEEEccCCccEEEEEECC
Confidence 899999999988776 89999999984443332 22211 124569999 98 57899999999999988532
Q ss_pred CceeEEeccCCCCeEE-EEEcCCCCEEEEEEecC
Q 008196 71 SPKVSWLKQHSAPTAG-ISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 71 ~~ll~tl~gH~~~VtS-VaFSPDG~~LaS~sWD~ 103 (574)
...+..+..|...|.+ ++|+|||+.|+..+.+.
T Consensus 344 ~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~ 377 (706)
T 2z3z_A 344 GRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEA 377 (706)
T ss_dssp SCEEEECCCSSSCEEEEEEECTTSSEEEEEESSS
T ss_pred CCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCC
Confidence 3345567788878877 79999999888776543
No 161
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.25 E-value=6.6e-06 Score=90.48 Aligned_cols=100 Identities=16% Similarity=0.116 Sum_probs=76.0
Q ss_pred ccCCCCEEEEEeCCCcEEEEECC-CCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCC--cEEEEeCCCCCceeEEec
Q 008196 2 YNCKDEHLASISLSGDLILHNLA-SGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDTTGRSPKVSWLK 78 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~-Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DG--tVrLWDl~~~~~ll~tl~ 78 (574)
|++||+++++++.|+.++||.+. .+. +..+..+...+..++.|+|+|+.++++++.|+ .++||++.........+.
T Consensus 344 ~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~ 422 (741)
T 2ecf_A 344 FLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLS 422 (741)
T ss_dssp ECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECC
T ss_pred ECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecc
Confidence 89999999999999988888775 455 77787777677454469999988777888777 899999843222233454
Q ss_pred cCCCCeEEEEEcCCCCEEEEEEecC
Q 008196 79 QHSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 79 gH~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
. ...+.+++|+|||++|+....+.
T Consensus 423 ~-~~~~~~~~~spdg~~l~~~~~~~ 446 (741)
T 2ecf_A 423 K-APGMHSASFARNASVYVDSWSNN 446 (741)
T ss_dssp C-SCSEEEEEECTTSSEEEEEEEET
T ss_pred c-CCCceEEEECCCCCEEEEEecCC
Confidence 4 55789999999999998865443
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.22 E-value=1.8e-06 Score=92.89 Aligned_cols=94 Identities=16% Similarity=0.195 Sum_probs=74.6
Q ss_pred CccCCCCEEEEEeCCC--cEEEEECCCCceeEEecCCCCCeEEEEE--------EccCCCeEEEEEeCCCcEEEEeCCCC
Q 008196 1 MYNCKDEHLASISLSG--DLILHNLASGAKAAELKDPNEQVLRVLD--------YSRNSRHLLVTAGDDGTLHLWDTTGR 70 (574)
Q Consensus 1 ~FSpDG~~LASGS~DG--tVrIWDl~Tg~~l~t~~gh~~~Vvs~La--------fSPdGr~LLaSgS~DGtVrLWDl~~~ 70 (574)
.|+|||++|+++..++ .|++||+.+++.. .+.+|...+ ..++ |+||| .++++++.|++++||++ +.
T Consensus 201 ~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~-g~ 276 (582)
T 3o4h_A 201 SISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDF-SSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID-GE 276 (582)
T ss_dssp EECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHH-HHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET-TE
T ss_pred eECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcCh-hhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE-CC
Confidence 3899999999888898 8999999988877 666665544 3335 99999 88999999999999999 42
Q ss_pred CceeEEeccCCCCeEEEEEcCCCCEEEEEEecCC
Q 008196 71 SPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRA 104 (574)
Q Consensus 71 ~~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~s 104 (574)
.. ..+...|.+++|+ +++++++.+.+..
T Consensus 277 --~~---~~~~~~v~~~~~s-dg~~l~~~s~~~~ 304 (582)
T 3o4h_A 277 --RV---EAPQGNHGRVVLW-RGKLVTSHTSLST 304 (582)
T ss_dssp --EE---CCCSSEEEEEEEE-TTEEEEEEEETTE
T ss_pred --ee---ccCCCceEEEEec-CCEEEEEEcCCCC
Confidence 21 1344578999999 9998888775544
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.19 E-value=2.5e-06 Score=86.51 Aligned_cols=98 Identities=12% Similarity=0.150 Sum_probs=68.6
Q ss_pred ccCCCCEEEEEeCCCcEEEEECC-CCceeEEecC-CCCCeEEEEEEccCCCe-EEEEEe-------------CCCcEEEE
Q 008196 2 YNCKDEHLASISLSGDLILHNLA-SGAKAAELKD-PNEQVLRVLDYSRNSRH-LLVTAG-------------DDGTLHLW 65 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~-Tg~~l~t~~g-h~~~Vvs~LafSPdGr~-LLaSgS-------------~DGtVrLW 65 (574)
|++||++|++++.+ .|.+||+. +++....... ..+.+ .+++|+|+|++ ++++++ .++++.+|
T Consensus 47 ~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~-~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~ 124 (365)
T 1jof_A 47 FDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHP-RANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVF 124 (365)
T ss_dssp ECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSG-GGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEE
T ss_pred ECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCC-ccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEE
Confidence 78999999999888 99999997 7766443321 11233 34589999964 455553 69999999
Q ss_pred eCCCCCceeEEec----cCCCCeEEEEEcCCCCEEEEEEe
Q 008196 66 DTTGRSPKVSWLK----QHSAPTAGISFSSDDKAVSSLCW 101 (574)
Q Consensus 66 Dl~~~~~ll~tl~----gH~~~VtSVaFSPDG~~LaS~sW 101 (574)
++.........+. .+...+.+++|+|||++|+++..
T Consensus 125 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 164 (365)
T 1jof_A 125 SVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL 164 (365)
T ss_dssp EECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred ccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC
Confidence 9964222222222 35567999999999998887653
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.19 E-value=5.1e-06 Score=90.27 Aligned_cols=107 Identities=15% Similarity=0.020 Sum_probs=72.8
Q ss_pred ccCCCCEEEEEeCC----------CcEEEEECCC------CceeEEec-CCCCCeEEEEEEccCCCeEEEEEeCC-----
Q 008196 2 YNCKDEHLASISLS----------GDLILHNLAS------GAKAAELK-DPNEQVLRVLDYSRNSRHLLVTAGDD----- 59 (574)
Q Consensus 2 FSpDG~~LASGS~D----------GtVrIWDl~T------g~~l~t~~-gh~~~Vvs~LafSPdGr~LLaSgS~D----- 59 (574)
|+|||++|++++.| ..|++||+.+ +. ...+. .+...+ ..++|+|||++ |+.++.+
T Consensus 137 ~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~-~~~~~SpDG~~-la~~~~~~~~~~ 213 (662)
T 3azo_A 137 LLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSDDAHRFV-TGPRLSPDGRQ-AVWLAWDHPRMP 213 (662)
T ss_dssp EETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSCSCSSEE-CCCEECTTSSE-EEEEEECTTCCT
T ss_pred ECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEecCCCcc-cCceECCCCCE-EEEEECCCCCCC
Confidence 89999999999877 6899999977 44 34555 444444 55699999966 5554433
Q ss_pred ---CcEEEEeCCCCC---ceeEEeccCCCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 60 ---GTLHLWDTTGRS---PKVSWLKQHSAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 60 ---GtVrLWDl~~~~---~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..|++||+.+.. .......+|...+..++|+|||+++++...+....+++.+
T Consensus 214 ~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~ 271 (662)
T 3azo_A 214 WEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVD 271 (662)
T ss_dssp TTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEEC
T ss_pred CCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEE
Confidence 479999997322 2222344567789999999999966655433322444443
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.15 E-value=7.3e-06 Score=80.00 Aligned_cols=95 Identities=8% Similarity=0.028 Sum_probs=66.2
Q ss_pred ccCCCCEEE-EEeCCCcEEEEECCCCceeEEecCCCC-----CeEEEEEEccCCCeEEEEEeC------------CCcEE
Q 008196 2 YNCKDEHLA-SISLSGDLILHNLASGAKAAELKDPNE-----QVLRVLDYSRNSRHLLVTAGD------------DGTLH 63 (574)
Q Consensus 2 FSpDG~~LA-SGS~DGtVrIWDl~Tg~~l~t~~gh~~-----~Vvs~LafSPdGr~LLaSgS~------------DGtVr 63 (574)
|++||++++ ++..++.|.+||+.+++.+..+..++. ..+..++|+|+|++ |++++. ++.|.
T Consensus 50 ~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~~~~~~~~i~ 128 (349)
T 1jmx_B 50 MAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKE-VYATVNPTQRLNDHYVVKPPRLE 128 (349)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSE-EEEEEEEEEECSSCEEECCCEEE
T ss_pred ECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCE-EEEEcccccccccccccCCCeEE
Confidence 789998655 555789999999999988877764331 11256699999966 555554 48999
Q ss_pred EEeCCCCCc--eeEEeccCCCCeEEEEEcCCCCEEEEE
Q 008196 64 LWDTTGRSP--KVSWLKQHSAPTAGISFSSDDKAVSSL 99 (574)
Q Consensus 64 LWDl~~~~~--ll~tl~gH~~~VtSVaFSPDG~~LaS~ 99 (574)
+||+.+... .+..+. +...+.+++|+|||+ ++..
T Consensus 129 ~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~ 164 (349)
T 1jmx_B 129 VFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVA 164 (349)
T ss_dssp EEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEE
T ss_pred EEECCCccccceeeecc-CCCcccceeECCCCc-EEEc
Confidence 999965211 122233 334689999999999 5554
No 166
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.11 E-value=1.1e-05 Score=89.53 Aligned_cols=99 Identities=7% Similarity=0.056 Sum_probs=70.1
Q ss_pred ccCCCCEEEEEeCCC-----cEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCc---------------
Q 008196 2 YNCKDEHLASISLSG-----DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT--------------- 61 (574)
Q Consensus 2 FSpDG~~LASGS~DG-----tVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGt--------------- 61 (574)
|+|||++||.+..++ +|+|||+.+++.+.....+. .+ ..++|+|||+. |+.++.|+.
T Consensus 132 ~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~-~~~~wspDg~~-l~~~~~~~~~~~~~~~~~~~~~~~ 208 (710)
T 2xdw_A 132 FSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KF-SCMAWTHDGKG-MFYNAYPQQDGKSDGTETSTNLHQ 208 (710)
T ss_dssp ECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CS-CCEEECTTSSE-EEEEECCCCSSCCSSSCCCCCCCC
T ss_pred ECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-cc-ceEEEEeCCCE-EEEEEECCccccccccccccCCCC
Confidence 899999999776543 89999999988765332221 22 44599999966 555556555
Q ss_pred -EEEEeCCCCCc---eeEEeccCCCCeEEEEEcCCCCEEEEEEecC
Q 008196 62 -LHLWDTTGRSP---KVSWLKQHSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 62 -VrLWDl~~~~~---ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
|++|++.+... ++.....|...+.+++|+|||++|+..++..
T Consensus 209 ~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 254 (710)
T 2xdw_A 209 KLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREG 254 (710)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECS
T ss_pred EEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEcc
Confidence 99999965431 2222334566688999999999999887643
No 167
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.11 E-value=1.6e-05 Score=88.27 Aligned_cols=98 Identities=9% Similarity=0.038 Sum_probs=70.9
Q ss_pred ccCCCCEEE-----EEeCCCcEEEEECCCCcee-EE-ecCCCCCeEEEEEEccCCCeEEEEEeCCCc-------------
Q 008196 2 YNCKDEHLA-----SISLSGDLILHNLASGAKA-AE-LKDPNEQVLRVLDYSRNSRHLLVTAGDDGT------------- 61 (574)
Q Consensus 2 FSpDG~~LA-----SGS~DGtVrIWDl~Tg~~l-~t-~~gh~~~Vvs~LafSPdGr~LLaSgS~DGt------------- 61 (574)
|+|||++|| .|+.+.+|+|||+.+|+.+ .. +.... . ..++|+|||+. |+.++.|..
T Consensus 128 ~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~--~-~~~~wspDg~~-l~~~~~d~~~~~~~~~~~~~~~ 203 (695)
T 2bkl_A 128 VSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGK--Y-ATPKWTPDSKG-FYYEWLPTDPSIKVDERPGYTT 203 (695)
T ss_dssp ECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCT--T-CCCEECTTSSE-EEEEECCCCTTSCGGGGGGGCE
T ss_pred ECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCccc--c-cceEEecCCCE-EEEEEecCCCCCccccCCCCCE
Confidence 899999999 4455678999999998865 21 22111 1 34599999965 666677665
Q ss_pred EEEEeCCCCC---ceeEEeccCCCCeEEEEEcCCCCEEEEEEecC
Q 008196 62 LHLWDTTGRS---PKVSWLKQHSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 62 VrLWDl~~~~---~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
|++|++.+.. .++.....|...+.++.|+|||++|+..+++.
T Consensus 204 v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 248 (695)
T 2bkl_A 204 IRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG 248 (695)
T ss_dssp EEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET
T ss_pred EEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC
Confidence 9999996543 23333445666789999999999999888775
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.07 E-value=4.3e-05 Score=76.44 Aligned_cols=96 Identities=11% Similarity=-0.001 Sum_probs=68.0
Q ss_pred CccCCCCEEEEEeC-CC--cEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEe
Q 008196 1 MYNCKDEHLASISL-SG--DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (574)
Q Consensus 1 ~FSpDG~~LASGS~-DG--tVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl 77 (574)
.|+|||++|+.++. ++ .|.+||+.+++......++...+ ..++|+|||+. |+.++.++.|++||+.+.... ...
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~-~~~~~spdg~~-l~~~~~~~~l~~~d~~~g~~~-~~~ 118 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNT-FGGFLSPDDDA-LFYVKDGRNLMRVDLATLEEN-VVY 118 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCS-SSCEECTTSSE-EEEEETTTEEEEEETTTCCEE-EEE
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCc-cceEEcCCCCE-EEEEeCCCeEEEEECCCCcce-eee
Confidence 38999999999887 67 48889998887765555444333 23489999955 777888899999999765432 234
Q ss_pred ccCCCCeEEEE--EcCCCCEEEEE
Q 008196 78 KQHSAPTAGIS--FSSDDKAVSSL 99 (574)
Q Consensus 78 ~gH~~~VtSVa--FSPDG~~LaS~ 99 (574)
..+...+.... +++++..++..
T Consensus 119 ~~~~~~~~~~~~~~~~dg~~l~~~ 142 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDCTKLVGI 142 (388)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEE
T ss_pred echhhcccccceeECCCCCeeccc
Confidence 44555454444 48999988753
No 169
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.03 E-value=5.5e-05 Score=75.65 Aligned_cols=96 Identities=17% Similarity=0.058 Sum_probs=71.8
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEE--EccCCCeEEEEE----------------------e
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLD--YSRNSRHLLVTA----------------------G 57 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~La--fSPdGr~LLaSg----------------------S 57 (574)
|+|||++|+.++.++.|++||+.+++....+..+...+ .... ++++++. ++.. .
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~-~~~~~~~~~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (388)
T 3pe7_A 88 LSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWV-GYGTWVANSDCTK-LVGIEIRREDWVPLTDWKKFHEFYFTK 165 (388)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEE-EEEEEEECTTSSE-EEEEEEEGGGCCCCCSHHHHHHHGGGC
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcc-cccceeECCCCCe-eccccccCcccccccccchhhhhhccC
Confidence 89999999999999999999999998776666555433 2223 4899855 4422 2
Q ss_pred CCCcEEEEeCCCCCceeEEeccCCCCeEEEEEcC-CCCEEEEEEe
Q 008196 58 DDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSS-DDKAVSSLCW 101 (574)
Q Consensus 58 ~DGtVrLWDl~~~~~ll~tl~gH~~~VtSVaFSP-DG~~LaS~sW 101 (574)
.+..|.+||+.+.. ...+..+...+..++|+| ||+.|+....
T Consensus 166 ~~~~l~~~d~~~g~--~~~l~~~~~~~~~~~~sp~dg~~l~~~~~ 208 (388)
T 3pe7_A 166 PCCRLMRVDLKTGE--STVILQENQWLGHPIYRPYDDSTVAFCHE 208 (388)
T ss_dssp CCEEEEEEETTTCC--EEEEEEESSCEEEEEEETTEEEEEEEEEC
T ss_pred CcceEEEEECCCCc--eEEeecCCccccccEECCCCCCEEEEEEe
Confidence 45789999997643 234556677899999999 9999887664
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.97 E-value=3.5e-05 Score=79.07 Aligned_cols=88 Identities=6% Similarity=0.164 Sum_probs=68.7
Q ss_pred ccCCCCEEEEEeC-----------CCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCC
Q 008196 2 YNCKDEHLASISL-----------SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR 70 (574)
Q Consensus 2 FSpDG~~LASGS~-----------DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~ 70 (574)
|++|+++++.+.. .+.|.+||+.+++.+..+..+. + ..|+|+|||++ |++++. ++|.+||..+.
T Consensus 261 ~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p-~~ia~spdg~~-l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 261 LHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--A-LSMTIDQQRNL-MLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--C-CEEEEETTTTE-EEEECS-SCEEEEECSSS
T ss_pred EecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--e-eEEEECCCCCE-EEEeCC-CeEEEEECCCC
Confidence 6788887776543 3479999999999999998776 4 67799999965 666666 99999999774
Q ss_pred C-ceeEEeccCCCCeEEEEEcCCCC
Q 008196 71 S-PKVSWLKQHSAPTAGISFSSDDK 94 (574)
Q Consensus 71 ~-~ll~tl~gH~~~VtSVaFSPDG~ 94 (574)
. ..+..+..+....+.++|+|+|.
T Consensus 336 ~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 336 EPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SCEEEEEETTSCSSEEEEEECCCSC
T ss_pred cceeeEEeccCCCCcEEEEecCCCC
Confidence 1 34445566777789999999986
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.94 E-value=0.00023 Score=70.04 Aligned_cols=96 Identities=9% Similarity=0.092 Sum_probs=71.1
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCC----CcEEEEeCCCCCceeEEe
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD----GTLHLWDTTGRSPKVSWL 77 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~D----GtVrLWDl~~~~~ll~tl 77 (574)
|+++|++++++..++.|.+||..+++....+..+...+ .+|+|+++| .++++...+ +.|.+||..+..... .+
T Consensus 52 ~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~~~-~~ 128 (333)
T 2dg1_A 52 FDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANP-AAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQD-II 128 (333)
T ss_dssp ECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSE-EEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEE-EE
T ss_pred ECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCc-ceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEEEE-EE
Confidence 78899988888899999999998887655443344455 788999998 556666666 689999997654321 22
Q ss_pred --ccCCCCeEEEEEcCCCCEEEEEE
Q 008196 78 --KQHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 78 --~gH~~~VtSVaFSPDG~~LaS~s 100 (574)
..+...+.+++|+++|.++++..
T Consensus 129 ~~~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 129 EDLSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp CSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred ccCccCCcccceEECCCCCEEEEec
Confidence 23455799999999998777653
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.91 E-value=8.5e-05 Score=71.67 Aligned_cols=102 Identities=16% Similarity=0.203 Sum_probs=73.2
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCC--CCeEEEEEEccCCCeEEEEEeCCC-cEEEEeCCCCCceeEEec
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPN--EQVLRVLDYSRNSRHLLVTAGDDG-TLHLWDTTGRSPKVSWLK 78 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~--~~Vvs~LafSPdGr~LLaSgS~DG-tVrLWDl~~~~~ll~tl~ 78 (574)
|+++|+++++...++.|++||. .+..+..+..+. ..+ ..|+++++| .++++...++ .|++||..+. .+..+.
T Consensus 171 ~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p-~~i~~d~~G-~l~v~~~~~~~~i~~~~~~g~--~~~~~~ 245 (286)
T 1q7f_A 171 VNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYP-IGVGINSNG-EILIADNHNNFNLTIFTQDGQ--LISALE 245 (286)
T ss_dssp ECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSE-EEEEECTTC-CEEEEECSSSCEEEEECTTSC--EEEEEE
T ss_pred ECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCC-cEEEECCCC-CEEEEeCCCCEEEEEECCCCC--EEEEEc
Confidence 6788998888888999999998 677777776432 345 778999998 6677777775 9999997653 233343
Q ss_pred cCC--CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 79 QHS--APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 79 gH~--~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
.+. ..+.+++|+++|+++++ .++ +.+.+++
T Consensus 246 ~~~~~~~~~~i~~~~~g~l~vs-~~~--~~v~v~~ 277 (286)
T 1q7f_A 246 SKVKHAQCFDVALMDDGSVVLA-SKD--YRLYIYR 277 (286)
T ss_dssp ESSCCSCEEEEEEETTTEEEEE-ETT--TEEEEEE
T ss_pred ccCCCCcceeEEECCCCcEEEE-CCC--CeEEEEE
Confidence 332 34789999999987766 443 4454444
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.90 E-value=4e-05 Score=75.63 Aligned_cols=95 Identities=15% Similarity=0.252 Sum_probs=65.3
Q ss_pred CccCCCCEEEEEeCC---C--cEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeC-----------------
Q 008196 1 MYNCKDEHLASISLS---G--DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD----------------- 58 (574)
Q Consensus 1 ~FSpDG~~LASGS~D---G--tVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~----------------- 58 (574)
.|+|||++||.++.+ + .|.+||+.+++....... .. + ..++|+|||+.+++++..
T Consensus 65 ~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~-~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (347)
T 2gop_A 65 RISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-I-RSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWF 141 (347)
T ss_dssp EECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-E-EEEEECTTSSEEEEEEECCCC---------CCCC-
T ss_pred EECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-c-cceeECCCCCEEEEEEccCCCcCCcEEEcccceee
Confidence 389999999988754 3 488889987766544443 33 4 777999999775555432
Q ss_pred ---------CCcEEEEeCCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEEec
Q 008196 59 ---------DGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 59 ---------DGtVrLWDl~~~~~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD 102 (574)
...|.+||+.+... +..+.. . .+.+++|+||| +++++..+
T Consensus 142 ~g~~~~~~~~~~l~~~d~~~~~~-~~~l~~-~-~~~~~~~spdg-~~~~~~~~ 190 (347)
T 2gop_A 142 DDLGFFDGEKTTFWIFDTESEEV-IEEFEK-P-RFSSGIWHRDK-IVVNVPHR 190 (347)
T ss_dssp --------CEEEEEEEETTTTEE-EEEEEE-E-TTCEEEEETTE-EEEEEECC
T ss_pred cCcccccCccceEEEEECCCCeE-EeeecC-C-CcccccCCCCe-EEEEEecc
Confidence 25789999976433 123333 3 78899999999 77776544
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.90 E-value=5.5e-05 Score=82.13 Aligned_cols=96 Identities=13% Similarity=0.140 Sum_probs=65.6
Q ss_pred ccCCCCEEEEEeCC--------CcEEEEECC-CC---ceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCC--cEEEEeC
Q 008196 2 YNCKDEHLASISLS--------GDLILHNLA-SG---AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDT 67 (574)
Q Consensus 2 FSpDG~~LASGS~D--------GtVrIWDl~-Tg---~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DG--tVrLWDl 67 (574)
|+|||++||.++.+ ..|.+||+. +| +......++...+ ..++|+|||+ ++++++.|+ .|.+||+
T Consensus 195 ~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~-~~~~~spdg~-l~~~~~~~~~~~l~~~~~ 272 (662)
T 3azo_A 195 LSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAI-AQAEWAPDGS-LIVATDRTGWWNLHRVDP 272 (662)
T ss_dssp ECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCE-EEEEECTTSC-EEEEECTTSSCEEEEECT
T ss_pred ECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceE-cceEECCCCe-EEEEECCCCCeEEEEEEC
Confidence 89999999988755 379999998 56 3333333344555 6779999996 788888888 5555555
Q ss_pred CCCCceeEEec-cCCCC--------eEEEEEcCCCCEEEEEEe
Q 008196 68 TGRSPKVSWLK-QHSAP--------TAGISFSSDDKAVSSLCW 101 (574)
Q Consensus 68 ~~~~~ll~tl~-gH~~~--------VtSVaFSPDG~~LaS~sW 101 (574)
.+.. . ..+. .|... +.+++|+++++++++...
T Consensus 273 ~~~~-~-~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 273 ATGA-A-TQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp TTCC-E-EESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS
T ss_pred CCCc-e-eecccccccccCccccccCceEeEeCCCEEEEEEEc
Confidence 4432 2 2232 22221 567899999998888764
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.87 E-value=0.00018 Score=72.06 Aligned_cols=97 Identities=8% Similarity=0.013 Sum_probs=73.8
Q ss_pred ccCCCCEEEEEeCC------------------------CcEEEEECCCCceeEEecCCC-CCeEEEEEEccCCCeEEEEE
Q 008196 2 YNCKDEHLASISLS------------------------GDLILHNLASGAKAAELKDPN-EQVLRVLDYSRNSRHLLVTA 56 (574)
Q Consensus 2 FSpDG~~LASGS~D------------------------GtVrIWDl~Tg~~l~t~~gh~-~~Vvs~LafSPdGr~LLaSg 56 (574)
|+++|+++++...+ +.|.+||..+++.+..+.... ..+ ..|+++++| .++++.
T Consensus 31 ~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p-~gia~d~~g-~l~v~d 108 (329)
T 3fvz_A 31 LDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLP-HGLSIDTDG-NYWVTD 108 (329)
T ss_dssp ECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSE-EEEEECTTS-CEEEEE
T ss_pred ECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCc-eEEEECCCC-CEEEEE
Confidence 68899999988877 479999999899877766333 345 778999998 578888
Q ss_pred eCCCcEEEEeCCCCCceeEEe---------ccCCCCeEEEEEcC-CCCEEEEEE
Q 008196 57 GDDGTLHLWDTTGRSPKVSWL---------KQHSAPTAGISFSS-DDKAVSSLC 100 (574)
Q Consensus 57 S~DGtVrLWDl~~~~~ll~tl---------~gH~~~VtSVaFSP-DG~~LaS~s 100 (574)
..++.|++||..+....+..+ .++.....+|+|+| ++.++++.+
T Consensus 109 ~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~ 162 (329)
T 3fvz_A 109 VALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG 162 (329)
T ss_dssp TTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC
T ss_pred CCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC
Confidence 889999999997643233333 34455689999999 777776654
No 176
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.79 E-value=0.00019 Score=71.33 Aligned_cols=93 Identities=10% Similarity=0.034 Sum_probs=72.3
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC-CC
Q 008196 4 CKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH-SA 82 (574)
Q Consensus 4 pDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH-~~ 82 (574)
..+++|++++.|+.|.+||..+|+.++.+..+......++.+.|+| ++|+ +.++.|+.||..+ . .+..+..+ ..
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~~G-~-~~W~~~~~~~~ 77 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITRDG-R-ELWNIAAPAGC 77 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECTTS-C-EEEEEECCTTC
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECCCC-C-EEEEEcCCCCc
Confidence 4578999999999999999999999999997653223666999999 5566 4578899999954 3 34444443 34
Q ss_pred CeEEEEEcCCCCEEEEEEe
Q 008196 83 PTAGISFSSDDKAVSSLCW 101 (574)
Q Consensus 83 ~VtSVaFSPDG~~LaS~sW 101 (574)
.+.++.+.++|++|++.+.
T Consensus 78 ~~~~~~~~~dG~~lv~~~~ 96 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCG 96 (276)
T ss_dssp EEEEEEECTTSCEEEEEES
T ss_pred cccccEECCCCCEEEEecC
Confidence 6889999999999988664
No 177
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.78 E-value=0.00021 Score=68.83 Aligned_cols=94 Identities=7% Similarity=0.090 Sum_probs=70.8
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecC--CCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD--PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~g--h~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
|+++|+++++...++.|.+||. .++.+..+.. +...+ ..|+++++| .++++...++.|++||..+. .+..+..
T Consensus 128 ~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p-~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~--~~~~~~~ 202 (286)
T 1q7f_A 128 VDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFP-NGVVVNDKQ-EIFISDNRAHCVKVFNYEGQ--YLRQIGG 202 (286)
T ss_dssp ECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSE-EEEEECSSS-EEEEEEGGGTEEEEEETTCC--EEEEESC
T ss_pred EeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCc-EEEEECCCC-CEEEEECCCCEEEEEcCCCC--EEEEEcc
Confidence 6788998888888999999997 5676666642 33345 788999998 67888888999999998663 3333433
Q ss_pred --CCCCeEEEEEcCCCCEEEEEE
Q 008196 80 --HSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 80 --H~~~VtSVaFSPDG~~LaS~s 100 (574)
+...+.+|+|+++|.++++..
T Consensus 203 ~g~~~~p~~i~~d~~G~l~v~~~ 225 (286)
T 1q7f_A 203 EGITNYPIGVGINSNGEILIADN 225 (286)
T ss_dssp TTTSCSEEEEEECTTCCEEEEEC
T ss_pred CCccCCCcEEEECCCCCEEEEeC
Confidence 335789999999998777654
No 178
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.68 E-value=0.00013 Score=77.45 Aligned_cols=88 Identities=15% Similarity=0.125 Sum_probs=65.4
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCCCCe
Q 008196 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPT 84 (574)
Q Consensus 5 DG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~~~V 84 (574)
|+++|+++ .++.|++||+.+......+..+...+ ..+.+.+. . ++.+..||.|.+||+...... . +...|
T Consensus 96 d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v-~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~~--~---~~~~V 165 (388)
T 1xip_A 96 HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPV-FQLKNVNN--T-LVILNSVNDLSALDLRTKSTK--Q---LAQNV 165 (388)
T ss_dssp ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCE-EEEEECSS--E-EEEEETTSEEEEEETTTCCEE--E---EEESE
T ss_pred CCCEEEEE-cCCcEEEEEchhhhccCccceeecce-eeEEecCC--C-EEEEECCCCEEEEEccCCccc--c---ccCCc
Confidence 78899999 88999999998776656666666666 45566554 3 788899999999999764322 1 44579
Q ss_pred EEEEEcCCCCEEEEEEecCC
Q 008196 85 AGISFSSDDKAVSSLCWQRA 104 (574)
Q Consensus 85 tSVaFSPDG~~LaS~sWD~s 104 (574)
+|+||||+| ++.+.-|..
T Consensus 166 s~v~WSpkG--~~vg~~dg~ 183 (388)
T 1xip_A 166 TSFDVTNSQ--LAVLLKDRS 183 (388)
T ss_dssp EEEEECSSE--EEEEETTSC
T ss_pred eEEEEcCCc--eEEEEcCCc
Confidence 999999999 555554433
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.67 E-value=0.00018 Score=71.51 Aligned_cols=94 Identities=18% Similarity=0.120 Sum_probs=64.0
Q ss_pred ccCCCCEEEEEeCC-----CcEEEEECCCCceeEEecCCCCCeEEEEEEcc-CCCeEEEEEe----------------CC
Q 008196 2 YNCKDEHLASISLS-----GDLILHNLASGAKAAELKDPNEQVLRVLDYSR-NSRHLLVTAG----------------DD 59 (574)
Q Consensus 2 FSpDG~~LASGS~D-----GtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSP-dGr~LLaSgS----------------~D 59 (574)
|+|||++|+.++.+ +.|.+||+.+++...... .. .. . +.|+| +|+. |+.++ .+
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~-~~-~-~~~s~~dg~~-l~~~~~~~p~~~~~~~~~~~~~~ 319 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MP-PC-S-HLMSNFDGSL-MVGDGCDAPVDVADADSYNIEND 319 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CC-SE-E-EEEECSSSSE-EEEEECCC----------CCCCC
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CC-CC-C-CCccCCCCce-EEEecCCcceeeccccccccCCC
Confidence 89999988777644 449999998887543322 11 22 3 58999 9964 55543 34
Q ss_pred CcEEEEeCCCCCceeEEeccCCC-----------CeEEEEEcCCCCEEEEEEec
Q 008196 60 GTLHLWDTTGRSPKVSWLKQHSA-----------PTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 60 GtVrLWDl~~~~~ll~tl~gH~~-----------~VtSVaFSPDG~~LaS~sWD 102 (574)
..|++||+.+.... .+..|.. .+.+++|+|||+.|+..+..
T Consensus 320 ~~i~~~d~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~ 371 (396)
T 3c5m_A 320 PFLYVLNTKAKSAQ--KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDF 371 (396)
T ss_dssp CEEEEEETTTTBCC--EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT
T ss_pred CcEEEEecccCceE--EccCCCCccccccccccCCCCCceEccCCCeEEEEecC
Confidence 78999999664322 3444443 25678999999999887643
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.66 E-value=0.00019 Score=73.56 Aligned_cols=102 Identities=8% Similarity=0.066 Sum_probs=70.8
Q ss_pred CCCCEEEEEe------CCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEe---------CCCcEEEEeCC
Q 008196 4 CKDEHLASIS------LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG---------DDGTLHLWDTT 68 (574)
Q Consensus 4 pDG~~LASGS------~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS---------~DGtVrLWDl~ 68 (574)
+++++++... .|+.|.+||..+++.+..+..+.. . .++|+|||+++.++.. .+++|.+||+.
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~-p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~ 89 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFN-G--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD 89 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEE-E--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCC-C--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc
Confidence 4667766654 478999999999998888875533 2 6699999966444432 36789999997
Q ss_pred CCCceeEEecc------CCCCeEEEEEcCCCCEEEEEEecCCcCEEE
Q 008196 69 GRSPKVSWLKQ------HSAPTAGISFSSDDKAVSSLCWQRAKPVFI 109 (574)
Q Consensus 69 ~~~~ll~tl~g------H~~~VtSVaFSPDG~~LaS~sWD~sg~viv 109 (574)
+... +..+.. +......++|+|||++|+++.+...+.+.+
T Consensus 90 t~~~-~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v 135 (361)
T 2oiz_A 90 KLTF-EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGI 135 (361)
T ss_dssp TCCE-EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEE
T ss_pred CCcE-EEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEE
Confidence 6433 333322 234577899999999999987653343333
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.64 E-value=6.7e-05 Score=74.69 Aligned_cols=96 Identities=11% Similarity=0.008 Sum_probs=68.3
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEE-------------------EEEccCCCeEEEEE----eC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRV-------------------LDYSRNSRHLLVTA----GD 58 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~-------------------LafSPdGr~LLaSg----S~ 58 (574)
|+|||++|+.++.++.|++||+.+++....+..+.... .. ++|+|+++.+++.. ..
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~-~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~ 166 (396)
T 3c5m_A 88 ISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWK-GYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNP 166 (396)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEE-EEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCC
T ss_pred ECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccC-CCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCC
Confidence 79999999999999999999998887655555443321 22 25677775533322 46
Q ss_pred CCcEEEEeCCCCCceeEEeccCCCCeEEEEEcC-CCCEEEEEE
Q 008196 59 DGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSS-DDKAVSSLC 100 (574)
Q Consensus 59 DGtVrLWDl~~~~~ll~tl~gH~~~VtSVaFSP-DG~~LaS~s 100 (574)
+..|.+||+.+.... .+..+...+..+.|+| ++..|+...
T Consensus 167 ~~~l~~~d~~~g~~~--~~~~~~~~~~~~~~sp~dg~~l~~~~ 207 (396)
T 3c5m_A 167 TCRLIKVDIETGELE--VIHQDTAWLGHPIYRPFDDSTVGFCH 207 (396)
T ss_dssp CEEEEEEETTTCCEE--EEEEESSCEEEEEEETTEEEEEEEEE
T ss_pred cceEEEEECCCCcEE--eeccCCcccccceECCCCCCEEEEEe
Confidence 778999999764332 3345667799999999 788777765
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.58 E-value=0.00068 Score=74.87 Aligned_cols=69 Identities=16% Similarity=0.104 Sum_probs=57.3
Q ss_pred CccCCCCEEEEEeCCCcEEEEECC--CCceeEEecCCCCCeEEEEEEc----cCCCeEEEEEeCCCcEEEEeCCCCC
Q 008196 1 MYNCKDEHLASISLSGDLILHNLA--SGAKAAELKDPNEQVLRVLDYS----RNSRHLLVTAGDDGTLHLWDTTGRS 71 (574)
Q Consensus 1 ~FSpDG~~LASGS~DGtVrIWDl~--Tg~~l~t~~gh~~~Vvs~LafS----PdGr~LLaSgS~DGtVrLWDl~~~~ 71 (574)
+|++||+++++++.|+.|.+||+. +++.+..+.... .. ..++|+ |||++++++.-.+++|.+||..+..
T Consensus 203 ~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P-~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 203 RLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EA-RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp EECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EE-EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CC-ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc
Confidence 489999999999999999999996 788888887533 34 677999 6998877888888999999986643
No 183
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.57 E-value=0.00036 Score=78.09 Aligned_cols=98 Identities=18% Similarity=0.043 Sum_probs=67.0
Q ss_pred ccCCCCEEEEEeCC-----CcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCC--------------cE
Q 008196 2 YNCKDEHLASISLS-----GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--------------TL 62 (574)
Q Consensus 2 FSpDG~~LASGS~D-----GtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DG--------------tV 62 (574)
|+|||++||.+..+ .+|+|||+.+|+.+.... +...+ ..++|+|| +.++++. .|+ .|
T Consensus 170 ~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~-~~~~wspD-~~l~~~~-~~~~~~~~~~~~~~~~~~v 245 (741)
T 1yr2_A 170 ASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKF-SGLAWLGN-DALLYSR-FAEPKEGQAFQALNYNQTV 245 (741)
T ss_dssp ECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEES-CCCEESTT-SEEEEEE-CCCC--------CCCCCEE
T ss_pred ECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCcee-ccEEEECC-CEEEEEE-ecCcccccccccCCCCCEE
Confidence 89999999987654 469999999998754321 11111 34589999 7855554 443 38
Q ss_pred EEEeCCCCC---ceeEEeccCCCCeEEEEEcCCCCEEEEEEecC
Q 008196 63 HLWDTTGRS---PKVSWLKQHSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 63 rLWDl~~~~---~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
++|++.+.. .++.....|...+.++.|+|||++|+..+++.
T Consensus 246 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 246 WLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp EEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT
T ss_pred EEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc
Confidence 999985533 12222334444688999999999999888764
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.56 E-value=0.00049 Score=66.94 Aligned_cols=92 Identities=11% Similarity=0.132 Sum_probs=67.3
Q ss_pred ccCCCCEEEEEeCCCcEEEEECC-CCce---eEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEe
Q 008196 2 YNCKDEHLASISLSGDLILHNLA-SGAK---AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~-Tg~~---l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl 77 (574)
|++||++|++...++.|.+||+. ++.. ...+..+.+.+ ..|+++++| .++++. ++.|.+||..+. .+..+
T Consensus 179 ~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p-~~i~~d~~G-~l~v~~--~~~v~~~~~~g~--~~~~~ 252 (296)
T 3e5z_A 179 FLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKT-DGLRVDAGG-LIWASA--GDGVHVLTPDGD--ELGRV 252 (296)
T ss_dssp ECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCC-CSEEEBTTS-CEEEEE--TTEEEEECTTSC--EEEEE
T ss_pred ECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCC-CeEEECCCC-CEEEEc--CCeEEEECCCCC--EEEEE
Confidence 78999988777788999999996 4554 33442223333 667999999 545554 889999999753 34456
Q ss_pred ccCCCCeEEEEE-cCCCCEEEEEE
Q 008196 78 KQHSAPTAGISF-SSDDKAVSSLC 100 (574)
Q Consensus 78 ~gH~~~VtSVaF-SPDG~~LaS~s 100 (574)
..+.. +.+++| .++++.|+..+
T Consensus 253 ~~~~~-~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 253 LTPQT-TSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp ECSSC-CCEEEEESTTSCEEEEEE
T ss_pred ECCCC-ceeEEEECCCCCEEEEEc
Confidence 66666 899999 58988888766
No 185
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.52 E-value=0.00033 Score=68.12 Aligned_cols=93 Identities=10% Similarity=0.002 Sum_probs=68.9
Q ss_pred CccCCCC-EEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 1 MYNCKDE-HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 1 ~FSpDG~-~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
.|+++|+ +++++..++.|.+||..++ +..+..+...+ .+|+|+++| .++++...++.|.+||........ ....
T Consensus 34 ~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~-~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g~~~~-~~~~ 108 (296)
T 3e5z_A 34 VYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQ-NGHCLNKQG-HLIACSHGLRRLERQREPGGEWES-IADS 108 (296)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSE-EEEEECTTC-CEEEEETTTTEEEEECSTTCCEEE-EECE
T ss_pred eEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCc-ceeeECCCC-cEEEEecCCCeEEEEcCCCCcEEE-Eeec
Confidence 3788998 7888888999999999776 56666565555 788999998 567777677899999995433221 1111
Q ss_pred ----CCCCeEEEEEcCCCCEEEE
Q 008196 80 ----HSAPTAGISFSSDDKAVSS 98 (574)
Q Consensus 80 ----H~~~VtSVaFSPDG~~LaS 98 (574)
....+.+++|+++|+++++
T Consensus 109 ~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 109 FEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp ETTEECCCCCCEEECTTSCEEEE
T ss_pred cCCCCCCCCCCEEECCCCCEEEE
Confidence 1234678999999998887
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.48 E-value=0.0011 Score=73.26 Aligned_cols=101 Identities=20% Similarity=0.190 Sum_probs=75.1
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCC--CCCceeEEeccCCCC
Q 008196 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT--GRSPKVSWLKQHSAP 83 (574)
Q Consensus 6 G~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~--~~~~ll~tl~gH~~~ 83 (574)
+.++++...++.|.++|..+++.+..+.... .+ .++.|+|||++ ++.++.|+.|.+||+. +. ..+..+.... .
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p-~~v~~SpDGr~-lyv~~~dg~V~viD~~~~t~-~~v~~i~~G~-~ 241 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AV-HISRLSASGRY-LFVIGRDGKVNMIDLWMKEP-TTVAEIKIGS-E 241 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECSS-CE-EEEEECTTSCE-EEEEETTSEEEEEETTSSSC-CEEEEEECCS-E
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-Cc-cceEECCCCCE-EEEEcCCCeEEEEECCCCCC-cEeEEEecCC-C
Confidence 3466777789999999999999998887433 34 57799999965 6677899999999995 43 3333444323 3
Q ss_pred eEEEEEc----CCCCEEEEEEecCCcCEEEec
Q 008196 84 TAGISFS----SDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 84 VtSVaFS----PDG~~LaS~sWD~sg~viv~e 111 (574)
...++|+ |||++++++.+......+++.
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~ 273 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG 273 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEEC
Confidence 6899999 699999998876555555553
No 187
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.46 E-value=0.00028 Score=74.78 Aligned_cols=84 Identities=11% Similarity=0.100 Sum_probs=65.2
Q ss_pred EEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCce-eEEe------c---
Q 008196 9 LASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK-VSWL------K--- 78 (574)
Q Consensus 9 LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~l-l~tl------~--- 78 (574)
+|.+..||.|.+||+..+.... +...+ +|++|+|+| ++.|..||+|++|+..+.... ...+ .
T Consensus 139 ~av~~~dG~L~v~dl~~~~~~~----~~~~V-s~v~WSpkG---~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~ 210 (388)
T 1xip_A 139 LVILNSVNDLSALDLRTKSTKQ----LAQNV-TSFDVTNSQ---LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELP 210 (388)
T ss_dssp EEEEETTSEEEEEETTTCCEEE----EEESE-EEEEECSSE---EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSC
T ss_pred EEEEECCCCEEEEEccCCcccc----ccCCc-eEEEEcCCc---eEEEEcCCcEEEEcCCCccccccceecCCccccccc
Confidence 8889999999999998777643 22345 899999998 577899999999998764321 2233 2
Q ss_pred cCCCCeEEEEEcCCCCEEEEEE
Q 008196 79 QHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 79 gH~~~VtSVaFSPDG~~LaS~s 100 (574)
+|...|.+|+|.+++.++++-.
T Consensus 211 ~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 211 VEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp TTTSEEEEEEESSSSEEEEEEE
T ss_pred CCCeeEEEEEEecCCeEEEEEc
Confidence 4778899999999998888643
No 188
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.44 E-value=0.0014 Score=65.40 Aligned_cols=95 Identities=13% Similarity=0.098 Sum_probs=68.1
Q ss_pred ccCC-CCEEEEEeCCCcEEEEECCCCceeEEecC--CCCCeEEEEEEccCCCeEEEEEe-------CCCcEEEEeCCCCC
Q 008196 2 YNCK-DEHLASISLSGDLILHNLASGAKAAELKD--PNEQVLRVLDYSRNSRHLLVTAG-------DDGTLHLWDTTGRS 71 (574)
Q Consensus 2 FSpD-G~~LASGS~DGtVrIWDl~Tg~~l~t~~g--h~~~Vvs~LafSPdGr~LLaSgS-------~DGtVrLWDl~~~~ 71 (574)
|+++ |+++++...++.|++||..+|+.+..+.. +...+ ..++|+| + .++++.+ .+..|++||+....
T Consensus 203 ~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~-~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~ 279 (329)
T 3fvz_A 203 LVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNV-FAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSGE 279 (329)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCE-EEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTCC
T ss_pred EECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCc-ceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCCe
Confidence 5677 77778888899999999988999888853 33345 6779999 4 4344433 34589999986643
Q ss_pred ceeEEe---ccCCCCeEEEEEcCCCCEEEEEE
Q 008196 72 PKVSWL---KQHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 72 ~ll~tl---~gH~~~VtSVaFSPDG~~LaS~s 100 (574)
.+..+ .+|...+.+|+|+++|.++++..
T Consensus 280 -~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~ 310 (329)
T 3fvz_A 280 -IIDVFKPVRKHFDMPHDIVASEDGTVYIGDA 310 (329)
T ss_dssp -EEEEECCSSSCCSSEEEEEECTTSEEEEEES
T ss_pred -EEEEEcCCCCccCCeeEEEECCCCCEEEEEC
Confidence 33344 36677799999999995555543
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.43 E-value=0.001 Score=63.05 Aligned_cols=96 Identities=6% Similarity=-0.055 Sum_probs=68.1
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|+++|+++++...++.|.+||...+........+...+ ..|+++++| .++++...++.|.+||..+..... ....+.
T Consensus 157 ~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p-~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~~~-~~~~~~ 233 (270)
T 1rwi_B 157 VDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAP-WGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTSTV-LPFTGL 233 (270)
T ss_dssp ECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSE-EEEEECTTC-CEEEEETTTSCEEEECTTCSCCEE-CCCCSC
T ss_pred EeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCc-eEEEECCCC-CEEEEECCCCcEEEEcCCCCccee-eccCCC
Confidence 56788888877778999999997665443322232345 778999998 777777778999999997643222 222344
Q ss_pred CCeEEEEEcCCCCEEEEEE
Q 008196 82 APTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~s 100 (574)
..+.+++|+++|..+++..
T Consensus 234 ~~p~~i~~~~~g~l~v~~~ 252 (270)
T 1rwi_B 234 NTPLAVAVDSDRTVYVADR 252 (270)
T ss_dssp SCEEEEEECTTCCEEEEEG
T ss_pred CCceeEEECCCCCEEEEEC
Confidence 5689999999998655543
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.31 E-value=0.0032 Score=62.38 Aligned_cols=102 Identities=13% Similarity=0.024 Sum_probs=70.6
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeC-CCcEEEEeCCCCCceeEEec--
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD-DGTLHLWDTTGRSPKVSWLK-- 78 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~-DGtVrLWDl~~~~~ll~tl~-- 78 (574)
+.++|++|+ +.++.|+.||. +|+.++.+..+....+..+.+.++|+ ++++.+. ++.|..+|..+. .+..+.
T Consensus 44 ~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd~~Gk--~l~~~~~~ 117 (276)
T 3no2_A 44 ATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGN-ALVAWCGHPSTILEVNMKGE--VLSKTEFE 117 (276)
T ss_dssp ECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSC-EEEEEESTTEEEEEECTTSC--EEEEEEEC
T ss_pred ECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCC-EEEEecCCCCEEEEEeCCCC--EEEEEecc
Confidence 568999988 45788999999 89999999976443446779999995 4666665 777877787553 222221
Q ss_pred ----cCCCCeEEEEEcCCCCEEEE-------EEecCCcCEEE
Q 008196 79 ----QHSAPTAGISFSSDDKAVSS-------LCWQRAKPVFI 109 (574)
Q Consensus 79 ----gH~~~VtSVaFSPDG~~LaS-------~sWD~sg~viv 109 (574)
.+......+++.++|.+|++ .+||..+++++
T Consensus 118 ~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w 159 (276)
T 3no2_A 118 TGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLN 159 (276)
T ss_dssp CSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEE
T ss_pred CCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEE
Confidence 22234566788999999887 34555555444
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.28 E-value=0.0021 Score=71.26 Aligned_cols=98 Identities=10% Similarity=0.016 Sum_probs=68.1
Q ss_pred ccCCCCEEEEEeCCCc----------------EEEEECCCCce--eEEecC--CCCCeEEEEEEccCCCeEEEEEeC---
Q 008196 2 YNCKDEHLASISLSGD----------------LILHNLASGAK--AAELKD--PNEQVLRVLDYSRNSRHLLVTAGD--- 58 (574)
Q Consensus 2 FSpDG~~LASGS~DGt----------------VrIWDl~Tg~~--l~t~~g--h~~~Vvs~LafSPdGr~LLaSgS~--- 58 (574)
|+|||+.|+.++.|+. |++|++.++.. ...+.. +...+ ..+.|+|||++++++...
T Consensus 178 wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~-~~~~~SpDg~~l~~~~~~~~~ 256 (710)
T 2xdw_A 178 WTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWM-GGAELSDDGRYVLLSIREGCD 256 (710)
T ss_dssp ECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCE-EEEEECTTSCEEEEEEECSSS
T ss_pred EEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEE-EEEEEcCCCCEEEEEEEccCC
Confidence 8999999999988766 99999988763 223332 33334 566999999775555542
Q ss_pred -CCcEEEEeCCC------CCceeEEeccCCCCeEEEEEcCCCCEEEEEEe
Q 008196 59 -DGTLHLWDTTG------RSPKVSWLKQHSAPTAGISFSSDDKAVSSLCW 101 (574)
Q Consensus 59 -DGtVrLWDl~~------~~~ll~tl~gH~~~VtSVaFSPDG~~LaS~sW 101 (574)
+..|++||+.+ .......+..|...+.. .|+++|..|+..+.
T Consensus 257 ~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 257 PVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTN 305 (710)
T ss_dssp SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEEC
T ss_pred CccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEEC
Confidence 57899999964 22234456666666655 58899998887653
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.19 E-value=0.0054 Score=67.90 Aligned_cols=106 Identities=13% Similarity=0.053 Sum_probs=65.6
Q ss_pred ccCCCCEEEEEeCCCc-------------EEEEECCCCce----eEEecCCCCCeEEEEEEccCCCeEEEEEeCC-C--c
Q 008196 2 YNCKDEHLASISLSGD-------------LILHNLASGAK----AAELKDPNEQVLRVLDYSRNSRHLLVTAGDD-G--T 61 (574)
Q Consensus 2 FSpDG~~LASGS~DGt-------------VrIWDl~Tg~~----l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~D-G--t 61 (574)
|++||+.|+.++.|.. |++|++.++.. +.....+...+ ..+.|+|||++++++...+ + .
T Consensus 175 wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~-~~~~~SpDG~~l~~~~~~~~~~~~ 253 (695)
T 2bkl_A 175 WTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTF-LQSDLSRDGKYLFVYILRGWSEND 253 (695)
T ss_dssp ECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCE-EEEEECTTSCCEEEEEEETTTEEE
T ss_pred EecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEE-EEEEECCCCCEEEEEEeCCCCceE
Confidence 8999999999998776 99999988762 22222333345 5669999997755555443 3 5
Q ss_pred EEEEeCCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEEecC-CcCEEEec
Q 008196 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQR-AKPVFIDE 111 (574)
Q Consensus 62 VrLWDl~~~~~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~-sg~viv~e 111 (574)
|.+||..+.. ...+..+...+....| ++|.+++...|+. ...+++.+
T Consensus 254 l~~~~~~~~~--~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d 301 (695)
T 2bkl_A 254 VYWKRPGEKD--FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVD 301 (695)
T ss_dssp EEEECTTCSS--CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEB
T ss_pred EEEEcCCCCc--eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEe
Confidence 6666654322 3345556666777777 5666444443332 33444433
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.13 E-value=0.0038 Score=60.27 Aligned_cols=94 Identities=10% Similarity=0.152 Sum_probs=64.9
Q ss_pred CCCCEEEEE-eCCCcEEEEECC-CCc-----eeEEecCCC-CCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeE
Q 008196 4 CKDEHLASI-SLSGDLILHNLA-SGA-----KAAELKDPN-EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (574)
Q Consensus 4 pDG~~LASG-S~DGtVrIWDl~-Tg~-----~l~t~~gh~-~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~ 75 (574)
++|++|+.+ ..++.|.+||+. .+. .+..+..+. ..+ ..|+++++| .++++...++.|.+||..+.. .+.
T Consensus 185 ~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p-~~i~~d~~G-~l~v~~~~~~~i~~~d~~~g~-~~~ 261 (314)
T 1pjx_A 185 GRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGA-DGMDFDEDN-NLLVANWGSSHIEVFGPDGGQ-PKM 261 (314)
T ss_dssp SCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEE-EEEEEBTTC-CEEEEEETTTEEEEECTTCBS-CSE
T ss_pred CCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCC-CceEECCCC-CEEEEEcCCCEEEEEcCCCCc-EeE
Confidence 788655544 568899999986 443 223333332 334 777999998 667777788999999997322 223
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEE
Q 008196 76 WLKQHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 76 tl~gH~~~VtSVaFSPDG~~LaS~s 100 (574)
.+..+...+.+++|+++++.|+.+.
T Consensus 262 ~~~~~~~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 262 RIRCPFEKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp EEECSSSCEEEEEECTTSSEEEEEE
T ss_pred EEeCCCCCceeEEECCCCCEEEEEe
Confidence 4455656799999999999666655
No 194
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.13 E-value=0.0037 Score=66.21 Aligned_cols=99 Identities=6% Similarity=-0.032 Sum_probs=72.1
Q ss_pred CccCCCCEEEEEeC-----CCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEe---------CCCcEEEEe
Q 008196 1 MYNCKDEHLASISL-----SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG---------DDGTLHLWD 66 (574)
Q Consensus 1 ~FSpDG~~LASGS~-----DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS---------~DGtVrLWD 66 (574)
+..|+++.++.... ++.|.+.|..+++.+..+...... . |+++|||++++++.. .++.|.+||
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 35689998888765 689999999999999888854443 4 699999987666542 468899999
Q ss_pred CCCCCceeEEeccC------CCCeEEEEEcCCCCEEEEEEec
Q 008196 67 TTGRSPKVSWLKQH------SAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 67 l~~~~~ll~tl~gH------~~~VtSVaFSPDG~~LaS~sWD 102 (574)
..+.........+. ....+.+.|+|||++++.....
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~ 157 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS 157 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC
Confidence 97754332221111 1245679999999999987653
No 195
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.12 E-value=0.0025 Score=64.03 Aligned_cols=96 Identities=7% Similarity=-0.010 Sum_probs=64.7
Q ss_pred ccCCCCEEEEEeCC----------CcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCC
Q 008196 2 YNCKDEHLASISLS----------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS 71 (574)
Q Consensus 2 FSpDG~~LASGS~D----------GtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~ 71 (574)
|+++|++++++..+ +.|.+||..+++.+..+....+.....|+|+|+++. |+.+.. .|.+||+.+..
T Consensus 179 ~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~-lyv~~~--~v~~~d~~t~~ 255 (328)
T 3dsm_A 179 MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDT-LYWINN--DIWRMPVEADR 255 (328)
T ss_dssp ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCE-EEEESS--SEEEEETTCSS
T ss_pred EcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCE-EEEEcc--EEEEEECCCCc
Confidence 67889877776654 789999999888877776433323377899999866 444433 89999996543
Q ss_pred cee-EEeccCCCCeEEEEEcCCCCEEEEEE
Q 008196 72 PKV-SWLKQHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 72 ~ll-~tl~gH~~~VtSVaFSPDG~~LaS~s 100 (574)
... ..+..+.....+|+++|++..|+.+.
T Consensus 256 ~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 256 VPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp CCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred eeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 321 11222245689999999655555554
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.11 E-value=0.0036 Score=61.51 Aligned_cols=91 Identities=10% Similarity=0.042 Sum_probs=61.9
Q ss_pred cCCCCEEEEEeCC--------CcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCcee
Q 008196 3 NCKDEHLASISLS--------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (574)
Q Consensus 3 SpDG~~LASGS~D--------GtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll 74 (574)
+|||++|+.++.+ ..|.+|| +++......++...+...+.|+ ++ ++++++.|+.++|| +.. ...
T Consensus 223 spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~-g~~- 294 (347)
T 2gop_A 223 DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY-IWD-GEI- 294 (347)
T ss_dssp EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE--EEEEEEETTEEEEE-EES-SSE-
T ss_pred CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc--EEEEEecCCcEEEE-EcC-Cce-
Confidence 6899988887754 3688888 5554433344444453337899 76 78899999999999 863 222
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEEecC
Q 008196 75 SWLKQHSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 75 ~tl~gH~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
..+..+...|.+++|++ .++++...+.
T Consensus 295 ~~~~~~~~~v~~~~~s~--~~~~~~~~~~ 321 (347)
T 2gop_A 295 KPIAKGRHWIMGFDVDE--IVVYLKETAT 321 (347)
T ss_dssp EEEECSSSEEEEEEESS--SEEEEEECSS
T ss_pred EEEecCCCeEEeeeeeC--cEEEEEcCCC
Confidence 34445567799999999 5666655443
No 197
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.11 E-value=0.00065 Score=66.76 Aligned_cols=93 Identities=17% Similarity=0.217 Sum_probs=70.8
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|++++..++..+.++.+++| .+..+..+..+...+ .+++|+++| .+++++..++.|.+||..+.... .....+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~~~-~~~~~~~ 86 (333)
T 2dg1_A 13 YSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQL-EGLNFDRQG-QLFLLDVFEGNIFKINPETKEIK-RPFVSHK 86 (333)
T ss_dssp SCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCE-EEEEECTTS-CEEEEETTTCEEEEECTTTCCEE-EEEECSS
T ss_pred ecCCccceeEEeecccCccc---ccceeEEEeccCccc-cCcEECCCC-CEEEEECCCCEEEEEeCCCCcEE-EEeeCCC
Confidence 67777777777889999999 455666777666666 778999998 57788888999999999764332 2233566
Q ss_pred CCeEEEEEcCCCCEEEEEE
Q 008196 82 APTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~s 100 (574)
..+.+++|+++|+++++..
T Consensus 87 ~~~~~i~~~~dg~l~v~~~ 105 (333)
T 2dg1_A 87 ANPAAIKIHKDGRLFVCYL 105 (333)
T ss_dssp SSEEEEEECTTSCEEEEEC
T ss_pred CCcceEEECCCCcEEEEeC
Confidence 7799999999998776653
No 198
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.11 E-value=0.00094 Score=74.37 Aligned_cols=96 Identities=14% Similarity=0.089 Sum_probs=64.0
Q ss_pred ccCCCCEEEEE-----eCCCcEEEEECCCCceeEE-ecCCCCCeEEEEEEccCCCeEEEEEeCCC-------------cE
Q 008196 2 YNCKDEHLASI-----SLSGDLILHNLASGAKAAE-LKDPNEQVLRVLDYSRNSRHLLVTAGDDG-------------TL 62 (574)
Q Consensus 2 FSpDG~~LASG-----S~DGtVrIWDl~Tg~~l~t-~~gh~~~Vvs~LafSPdGr~LLaSgS~DG-------------tV 62 (574)
|||||++||-+ +.+.+|+|||+.+|+.+.. +...+ ...++|+ ||+.|++ +..|. .|
T Consensus 136 ~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k---~~~~~Ws-Dg~~l~y-~~~~~~~~~~~~~~~~~~~v 210 (693)
T 3iuj_A 136 FSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVK---FSGISWL-GNEGFFY-SSYDKPDGSELSARTDQHKV 210 (693)
T ss_dssp ECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEE---SCCCEEE-TTTEEEE-EESSCCC-------CCCCEE
T ss_pred ECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCce---eccEEEe-CCCEEEE-EEecCcccccccccCCCcEE
Confidence 89999998843 3446799999999986543 22111 1334899 9977444 44443 49
Q ss_pred EEEeCCCCC---ceeEEecc-CCCCeEEEEEcCCCCEEEEEEec
Q 008196 63 HLWDTTGRS---PKVSWLKQ-HSAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 63 rLWDl~~~~---~ll~tl~g-H~~~VtSVaFSPDG~~LaS~sWD 102 (574)
++|++.+.. .++..... |...+.++.|+|||++|+.....
T Consensus 211 ~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~ 254 (693)
T 3iuj_A 211 YFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAAN 254 (693)
T ss_dssp EEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEES
T ss_pred EEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEcc
Confidence 999985532 23333344 55567899999999998765543
No 199
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.08 E-value=0.013 Score=60.82 Aligned_cols=97 Identities=4% Similarity=-0.062 Sum_probs=67.0
Q ss_pred ccCCCCEEEEEeC--CC---cEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEe---------CCCcEEEEeC
Q 008196 2 YNCKDEHLASISL--SG---DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG---------DDGTLHLWDT 67 (574)
Q Consensus 2 FSpDG~~LASGS~--DG---tVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS---------~DGtVrLWDl 67 (574)
..+++++++.... +. .|.+||..+++.+..+...... .++|+|||+++.++.. .++.|.+||.
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p---~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP---NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC---CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 4578887777653 22 8899999999988877744322 5699999977555542 4788999999
Q ss_pred CCCCceeEEe-cc------CCCCeEEEEEcCCCCEEEEEEec
Q 008196 68 TGRSPKVSWL-KQ------HSAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 68 ~~~~~ll~tl-~g------H~~~VtSVaFSPDG~~LaS~sWD 102 (574)
.+.... ..+ .+ +......+.|+|||++|+.+...
T Consensus 105 ~t~~~~-~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~ 145 (373)
T 2mad_H 105 VTFLPI-ADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA 145 (373)
T ss_pred CCCcEE-EEEECCCccccccCCCccceEECCCCCEEEEEecC
Confidence 764332 222 11 01234689999999999998754
No 200
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.03 E-value=0.0063 Score=57.49 Aligned_cols=95 Identities=6% Similarity=-0.011 Sum_probs=64.5
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
|+++|+++++...++.|.+|+..+.............+ ..|+++++| .++++...++.|.+||..+.... .....+.
T Consensus 115 ~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p-~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~ 191 (270)
T 1rwi_B 115 VDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDP-DGVAVDNSG-NVYVTDTDNNRVVKLEAESNNQV-VLPFTDI 191 (270)
T ss_dssp ECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSC-CCEEECTTC-CEEEEEGGGTEEEEECTTTCCEE-ECCCSSC
T ss_pred ECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCc-eeEEEeCCC-CEEEEECCCCEEEEEecCCCceE-eecccCC
Confidence 56788888887788999999875544332222222234 667999998 56777777899999999764322 2223333
Q ss_pred CCeEEEEEcCCCCEEEEE
Q 008196 82 APTAGISFSSDDKAVSSL 99 (574)
Q Consensus 82 ~~VtSVaFSPDG~~LaS~ 99 (574)
..+.+|+++++|..+++.
T Consensus 192 ~~p~~i~~d~~g~l~v~~ 209 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTE 209 (270)
T ss_dssp CSEEEEEECTTCCEEEEE
T ss_pred CCceEEEECCCCCEEEEE
Confidence 568999999999655543
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.01 E-value=0.0045 Score=60.81 Aligned_cols=96 Identities=14% Similarity=0.142 Sum_probs=67.7
Q ss_pred ccCCCCEEE-EEeCCCcEEEEEC--CCCcee-----EEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCce
Q 008196 2 YNCKDEHLA-SISLSGDLILHNL--ASGAKA-----AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK 73 (574)
Q Consensus 2 FSpDG~~LA-SGS~DGtVrIWDl--~Tg~~l-----~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~l 73 (574)
|++|++.|+ +.+.++.|.+||+ .+|... ..+..+.+.+ ..|++.++| ++.++...++.|.+||..+.. .
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p-~g~~~d~~G-~lwva~~~~~~v~~~d~~tG~-~ 232 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIP-DGMCIDAEG-KLWVACYNGGRVIRLDPVTGK-R 232 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEE-EEEEEBTTS-CEEEEEETTTEEEEECTTTCC-E
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCC-CeeEECCCC-CEEEEEcCCCEEEEEcCCCce-E
Confidence 789998665 5556889999997 455431 2222222334 778999998 667777778899999997432 4
Q ss_pred eEEeccCCCCeEEEEEc-CCCCEEEEEE
Q 008196 74 VSWLKQHSAPTAGISFS-SDDKAVSSLC 100 (574)
Q Consensus 74 l~tl~gH~~~VtSVaFS-PDG~~LaS~s 100 (574)
+..+..+...+++++|. |+++.|+..+
T Consensus 233 ~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 233 LQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred EEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 44566666679999998 8888776655
No 202
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.78 E-value=0.016 Score=58.38 Aligned_cols=101 Identities=9% Similarity=-0.005 Sum_probs=67.8
Q ss_pred ccCCCCEEEEEeC-----CCcEEEEECCCCceeEEecCCC-----CCeEEEEEEccCCCeEEEEEe---CCCcEEEEeCC
Q 008196 2 YNCKDEHLASISL-----SGDLILHNLASGAKAAELKDPN-----EQVLRVLDYSRNSRHLLVTAG---DDGTLHLWDTT 68 (574)
Q Consensus 2 FSpDG~~LASGS~-----DGtVrIWDl~Tg~~l~t~~gh~-----~~Vvs~LafSPdGr~LLaSgS---~DGtVrLWDl~ 68 (574)
|+++|+++++-.. ++.|.+||+.+++.+..+..+. ......|++++++..++++.. .++.|.+||+.
T Consensus 74 ~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~ 153 (343)
T 2qe8_A 74 SDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ 153 (343)
T ss_dssp ECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT
T ss_pred EcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC
Confidence 5678876665543 6889999999898777665321 122266789986557667766 78999999996
Q ss_pred CCCceeEEeccCC-----------------------------CCeEEEEEcCCCCEEEEEEecC
Q 008196 69 GRSPKVSWLKQHS-----------------------------APTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 69 ~~~~ll~tl~gH~-----------------------------~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
+.. ....+.+|. ..+..|+|+|||+.|+...+..
T Consensus 154 ~g~-~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~ 216 (343)
T 2qe8_A 154 TGL-AARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS 216 (343)
T ss_dssp TCC-EEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC
T ss_pred CCC-EEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC
Confidence 432 222333321 2368899999999888876543
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.71 E-value=0.022 Score=54.04 Aligned_cols=93 Identities=9% Similarity=-0.033 Sum_probs=65.0
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEE-ecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAE-LKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t-~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
++++|+++++...++.|.+||. +++.... +..+...+ ..|++.++| .++++...++.|.+||..+ ......+..+
T Consensus 148 ~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~-~~i~~~~~g-~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~ 223 (299)
T 2z2n_A 148 LGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGP-VGITKGNDD-ALWFVEIIGNKIGRITTSG-EITEFKIPTP 223 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE-EEEEECTTS-SEEEEETTTTEEEEECTTC-CEEEEECSST
T ss_pred EcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcc-eeEEECCCC-CEEEEccCCceEEEECCCC-cEEEEECCCC
Confidence 5678888887777889999999 7765432 22233334 778999998 5666666788999999933 3322223445
Q ss_pred CCCeEEEEEcCCCCEEEE
Q 008196 81 SAPTAGISFSSDDKAVSS 98 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~LaS 98 (574)
...+.+++++++|..+++
T Consensus 224 ~~~~~~i~~~~~g~l~v~ 241 (299)
T 2z2n_A 224 NARPHAITAGAGIDLWFT 241 (299)
T ss_dssp TCCEEEEEECSTTCEEEE
T ss_pred CCCceeEEECCCCCEEEe
Confidence 567899999999885554
No 204
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.70 E-value=0.022 Score=57.03 Aligned_cols=95 Identities=12% Similarity=0.121 Sum_probs=65.4
Q ss_pred ccCCCCEEEEE-eCCCcEEEEECC--CC-ce-----eEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCc
Q 008196 2 YNCKDEHLASI-SLSGDLILHNLA--SG-AK-----AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (574)
Q Consensus 2 FSpDG~~LASG-S~DGtVrIWDl~--Tg-~~-----l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ 72 (574)
|++||++|+.+ ..++.|.+||+. +| .. +..+..... ....+++.++| .++++...++.|.+||..+.
T Consensus 186 ~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~-~p~gi~~d~~G-~lwva~~~~~~v~~~d~~g~-- 261 (326)
T 2ghs_A 186 FSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKG-GMDGSVCDAEG-HIWNARWGEGAVDRYDTDGN-- 261 (326)
T ss_dssp ECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSS-EEEEEEECTTS-CEEEEEETTTEEEEECTTCC--
T ss_pred EcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCC-CCCeeEECCCC-CEEEEEeCCCEEEEECCCCC--
Confidence 78999876554 467899999986 56 32 222322223 33778999998 55666666788999998543
Q ss_pred eeEEeccCCCCeEEEEEc-CCCCEEEEEE
Q 008196 73 KVSWLKQHSAPTAGISFS-SDDKAVSSLC 100 (574)
Q Consensus 73 ll~tl~gH~~~VtSVaFS-PDG~~LaS~s 100 (574)
.+..+..+...+.+++|+ +++..|+...
T Consensus 262 ~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 262 HIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred EEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 344555566679999998 8888776654
No 205
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.69 E-value=0.021 Score=57.24 Aligned_cols=98 Identities=10% Similarity=0.111 Sum_probs=65.9
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC----
Q 008196 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS---- 81 (574)
Q Consensus 6 G~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~---- 81 (574)
++++++...++.|.+||..+++.+..+.. ...+ ..|++++++ +++++...++.|.+||+.+... ...+....
T Consensus 54 ~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p-~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~-~~~i~~g~~~~~ 129 (328)
T 3dsm_A 54 GIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSP-RYIHFLSDE-KAYVTQIWDYRIFIINPKTYEI-TGYIECPDMDME 129 (328)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSE-EEEEEEETT-EEEEEEBSCSEEEEEETTTTEE-EEEEECTTCCTT
T ss_pred CEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCC-cEEEEeCCC-eEEEEECCCCeEEEEECCCCeE-EEEEEcCCcccc
Confidence 44555666789999999999999888863 3445 677999998 7666666899999999977432 22232211
Q ss_pred -CCeEEEEEcCCCCEEEEEEecCCcCEEE
Q 008196 82 -APTAGISFSSDDKAVSSLCWQRAKPVFI 109 (574)
Q Consensus 82 -~~VtSVaFSPDG~~LaS~sWD~sg~viv 109 (574)
.....|++ ++..|+.+.|...+.+.+
T Consensus 130 ~~~p~~i~~--~~~~lyv~~~~~~~~v~v 156 (328)
T 3dsm_A 130 SGSTEQMVQ--YGKYVYVNCWSYQNRILK 156 (328)
T ss_dssp TCBCCCEEE--ETTEEEEEECTTCCEEEE
T ss_pred CCCcceEEE--ECCEEEEEcCCCCCEEEE
Confidence 13456777 566677777743334333
No 206
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.66 E-value=0.024 Score=53.73 Aligned_cols=93 Identities=9% Similarity=-0.001 Sum_probs=64.2
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEe-cCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAEL-KDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~-~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
++++|+++++...++.|.+||. ++...... ..+...+ ..+++.++| .++++...++.|..||..+ .........+
T Consensus 106 ~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~-~~i~~~~~g-~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~ 181 (299)
T 2z2n_A 106 EGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYP-SFITLGSDN-ALWFTENQNNAIGRITESG-DITEFKIPTP 181 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE-EEEEECTTS-CEEEEETTTTEEEEECTTC-CEEEEECSST
T ss_pred ECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCC-ceEEEcCCC-CEEEEeCCCCEEEEEcCCC-cEEEeeCCCC
Confidence 5678888888777889999999 66554322 2223334 788999998 6677666778999999933 3222223344
Q ss_pred CCCeEEEEEcCCCCEEEE
Q 008196 81 SAPTAGISFSSDDKAVSS 98 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~LaS 98 (574)
...+.++++.++|..+++
T Consensus 182 ~~~~~~i~~~~~g~l~v~ 199 (299)
T 2z2n_A 182 ASGPVGITKGNDDALWFV 199 (299)
T ss_dssp TCCEEEEEECTTSSEEEE
T ss_pred CCcceeEEECCCCCEEEE
Confidence 556889999999886554
No 207
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.48 E-value=0.024 Score=58.70 Aligned_cols=69 Identities=14% Similarity=0.049 Sum_probs=50.7
Q ss_pred CccCCCCEEEEEe----------CCCcEEEEECCCCceeEEecCC-------CCCeEEEEEEccCCCeEEEEEeC-CCcE
Q 008196 1 MYNCKDEHLASIS----------LSGDLILHNLASGAKAAELKDP-------NEQVLRVLDYSRNSRHLLVTAGD-DGTL 62 (574)
Q Consensus 1 ~FSpDG~~LASGS----------~DGtVrIWDl~Tg~~l~t~~gh-------~~~Vvs~LafSPdGr~LLaSgS~-DGtV 62 (574)
.|+|||++++.+. .++.|.+||..+++.+..+... .... ..++|+|||++++++... ++.|
T Consensus 72 ~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p-~~~~~spDG~~l~v~n~~~~~~v 150 (373)
T 2mad_H 72 VAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYS-WMNANTPNNADLLFFQFAAGPAV 150 (373)
T ss_pred EECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCc-cceEECCCCCEEEEEecCCCCeE
Confidence 3799999988886 3678999999988887766532 1123 456999999775555433 5889
Q ss_pred EEEeCCCCC
Q 008196 63 HLWDTTGRS 71 (574)
Q Consensus 63 rLWDl~~~~ 71 (574)
.++| .+..
T Consensus 151 ~viD-~t~~ 158 (373)
T 2mad_H 151 GLVV-QGGS 158 (373)
T ss_pred EEEE-CCCC
Confidence 9999 7753
No 208
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.27 E-value=0.025 Score=60.55 Aligned_cols=104 Identities=7% Similarity=-0.031 Sum_probs=71.4
Q ss_pred CCCCEEEEEeC-C----CcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEe---------CCCcEEEEeCCC
Q 008196 4 CKDEHLASISL-S----GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG---------DDGTLHLWDTTG 69 (574)
Q Consensus 4 pDG~~LASGS~-D----GtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS---------~DGtVrLWDl~~ 69 (574)
+++++++.... + +.|.++|..+++.+..+...... .|+++|||++++++.. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P---gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP---HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC---EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC---ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 46676666554 2 69999999999999888854433 4699999987666643 477999999977
Q ss_pred CCceeEEec-c------CCCCeEEEEEcCCCCEEEEEEecCCcC-EEEec
Q 008196 70 RSPKVSWLK-Q------HSAPTAGISFSSDDKAVSSLCWQRAKP-VFIDE 111 (574)
Q Consensus 70 ~~~ll~tl~-g------H~~~VtSVaFSPDG~~LaS~sWD~sg~-viv~e 111 (574)
.... ..+. + .......+.|+|||++++...+...+. .+++.
T Consensus 159 ~~vv-~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~ 207 (426)
T 3c75_H 159 FLPI-ADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDL 207 (426)
T ss_dssp CCEE-EEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEET
T ss_pred CcEE-EEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEEC
Confidence 5433 2321 1 112356789999999999987653333 34443
No 209
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.24 E-value=0.0089 Score=63.32 Aligned_cols=70 Identities=11% Similarity=0.124 Sum_probs=52.2
Q ss_pred CccCCCCEEEEEe----------CCCcEEEEECCCCceeEEecCCC-------CCeEEEEEEccCCCeEEEEEe-CCCcE
Q 008196 1 MYNCKDEHLASIS----------LSGDLILHNLASGAKAAELKDPN-------EQVLRVLDYSRNSRHLLVTAG-DDGTL 62 (574)
Q Consensus 1 ~FSpDG~~LASGS----------~DGtVrIWDl~Tg~~l~t~~gh~-------~~Vvs~LafSPdGr~LLaSgS-~DGtV 62 (574)
.|+|||++++.++ .++.|.+||..+++.+..+.-.. ... ..++|+|||++++++.. .++.|
T Consensus 84 a~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P-~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 84 VVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYP-WMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCG-GGEEECTTSSEEEEEECSSSCEE
T ss_pred EECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCC-ceEEEcCCCCEEEEEEcCCCCeE
Confidence 3789999887765 36789999999999888775321 122 34599999977665553 37899
Q ss_pred EEEeCCCCC
Q 008196 63 HLWDTTGRS 71 (574)
Q Consensus 63 rLWDl~~~~ 71 (574)
.++|+.+..
T Consensus 163 sVID~~t~~ 171 (386)
T 3sjl_D 163 GVVDLEGKA 171 (386)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCc
Confidence 999997753
No 210
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.21 E-value=0.016 Score=65.50 Aligned_cols=99 Identities=8% Similarity=0.006 Sum_probs=62.7
Q ss_pred cc-CCCCEEEEEeC-C----CcEEEEECCCC-ceeE-EecCCCCCeEEEEEEccCCCeEEEEEeCC----CcEEEEeCCC
Q 008196 2 YN-CKDEHLASISL-S----GDLILHNLASG-AKAA-ELKDPNEQVLRVLDYSRNSRHLLVTAGDD----GTLHLWDTTG 69 (574)
Q Consensus 2 FS-pDG~~LASGS~-D----GtVrIWDl~Tg-~~l~-t~~gh~~~Vvs~LafSPdGr~LLaSgS~D----GtVrLWDl~~ 69 (574)
|+ |||++||-+.. + .+|+++|+.+| +.+. .+.. +...++|+|||+.|+++...+ ..|.+|++.+
T Consensus 181 ~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~----~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt 256 (751)
T 2xe4_A 181 PAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG----TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGK 256 (751)
T ss_dssp ECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE----ECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTS
T ss_pred ecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC----ceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCC
Confidence 78 99998885543 3 35999999988 6321 1111 123348999998766665432 3578888865
Q ss_pred CCce-eEEec-cCCCCeEEEEEcCCCCEEEEEEecCC
Q 008196 70 RSPK-VSWLK-QHSAPTAGISFSSDDKAVSSLCWQRA 104 (574)
Q Consensus 70 ~~~l-l~tl~-gH~~~VtSVaFSPDG~~LaS~sWD~s 104 (574)
.... ...+. .+......+.|+|||++|+..++...
T Consensus 257 ~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 293 (751)
T 2xe4_A 257 LQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPE 293 (751)
T ss_dssp CGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSS
T ss_pred CchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCC
Confidence 3211 11222 23345678899999999998776543
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.21 E-value=0.013 Score=57.72 Aligned_cols=94 Identities=9% Similarity=0.003 Sum_probs=63.8
Q ss_pred CccCCCC-EEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeE-Eec
Q 008196 1 MYNCKDE-HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS-WLK 78 (574)
Q Consensus 1 ~FSpDG~-~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~-tl~ 78 (574)
+|+++|+ +++++..++.|..|+. ++. +..+..+...+ ..++|+++| +++++...++.|.+||..+....+. ...
T Consensus 51 ~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~-~gl~~d~dG-~l~v~~~~~~~v~~~~~~g~~~~~~~~~~ 126 (305)
T 3dr2_A 51 AWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFT-NGNAVDAQQ-RLVHCEHGRRAITRSDADGQAHLLVGRYA 126 (305)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCE-EEEEECTTS-CEEEEETTTTEEEEECTTSCEEEEECEET
T ss_pred eEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCcc-ceeeECCCC-CEEEEECCCCEEEEECCCCCEEEEEeccC
Confidence 4788998 5667778899999998 555 34455444455 778999998 5566666678899999864311111 111
Q ss_pred cC-CCCeEEEEEcCCCCEEEE
Q 008196 79 QH-SAPTAGISFSSDDKAVSS 98 (574)
Q Consensus 79 gH-~~~VtSVaFSPDG~~LaS 98 (574)
+. ...+.++++.++|.++++
T Consensus 127 ~~~~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 127 GKRLNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp TEECSCCCCEEECTTSCEEEE
T ss_pred CCccCCCCCEEECCCCCEEEe
Confidence 11 134678999999998876
No 212
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.18 E-value=0.069 Score=50.53 Aligned_cols=94 Identities=13% Similarity=0.059 Sum_probs=64.9
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeE-EecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAA-ELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~-t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
++++|+++++...++.|.+||.. ++... .+..+...+ ..|++.++| .++++...++.|..||..+ ......+..+
T Consensus 27 ~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~-~~i~~~~~g-~l~v~~~~~~~v~~~d~~g-~~~~~~~~~~ 102 (300)
T 2qc5_A 27 SSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKV-MCLIVSSLG-DIWFTENGANKIGKLSKKG-GFTEYPLPQP 102 (300)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCE-EEEEECTTS-CEEEEETTTTEEEEECTTS-CEEEEECSST
T ss_pred ECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcc-eeEEECCCC-CEEEEecCCCeEEEECCCC-CeEEecCCCC
Confidence 46788888877778999999997 65433 222222344 777999998 5566666678999999874 3322223334
Q ss_pred CCCeEEEEEcCCCCEEEEE
Q 008196 81 SAPTAGISFSSDDKAVSSL 99 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~LaS~ 99 (574)
...+.++++.++|.++++.
T Consensus 103 ~~~~~~i~~~~~g~l~v~~ 121 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQ 121 (300)
T ss_dssp TCCEEEEEECSTTCEEEEE
T ss_pred CCCCccceECCCCCEEEEc
Confidence 4568999999999877664
No 213
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.15 E-value=0.075 Score=50.27 Aligned_cols=94 Identities=7% Similarity=-0.066 Sum_probs=63.6
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEec-CCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELK-DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~-gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
++++|+++++...++.|.+||. +++...... .+...+ ..|++.++| .++++...++.|.+||..+ ......+..+
T Consensus 153 ~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~-~~i~~d~~g-~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~ 228 (300)
T 2qc5_A 153 LGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAP-VGITSGNDG-ALWFVEIMGNKIGRITTTG-EISEYDIPTP 228 (300)
T ss_dssp ECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE-EEEEECTTS-SEEEEETTTTEEEEECTTC-CEEEEECSST
T ss_pred ECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCc-ceEEECCCC-CEEEEccCCCEEEEEcCCC-cEEEEECCCC
Confidence 5678887777766888999998 665543211 222334 778999998 6666666677899999844 2222223345
Q ss_pred CCCeEEEEEcCCCCEEEEE
Q 008196 81 SAPTAGISFSSDDKAVSSL 99 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~LaS~ 99 (574)
...+.+|++.++|..+++.
T Consensus 229 ~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 229 NARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp TCCEEEEEECSTTCEEEEE
T ss_pred CCCceEEEECCCCCEEEec
Confidence 5668999999998855543
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.14 E-value=0.041 Score=61.39 Aligned_cols=98 Identities=13% Similarity=0.127 Sum_probs=63.4
Q ss_pred ccCCCCEEEEEeCCCc--------------EEEEECCCCce--eEEecCCC--CCeEEEEEEccCCCeEEEEEeC----C
Q 008196 2 YNCKDEHLASISLSGD--------------LILHNLASGAK--AAELKDPN--EQVLRVLDYSRNSRHLLVTAGD----D 59 (574)
Q Consensus 2 FSpDG~~LASGS~DGt--------------VrIWDl~Tg~~--l~t~~gh~--~~Vvs~LafSPdGr~LLaSgS~----D 59 (574)
|+|| +.|+.++.|+. |++|++.++.. ...+.... ..+ ..+.|+|||+++++++.. +
T Consensus 216 wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~-~~~~~SpDG~~l~~~~~~~~~~~ 293 (741)
T 1yr2_A 216 WLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRG-HGASVSSDGRWVVITSSEGTDPV 293 (741)
T ss_dssp ESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCE-EEEEECTTSCEEEEEEECTTCSC
T ss_pred EECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEE-EEEEECCCCCEEEEEEEccCCCc
Confidence 8999 98888887654 89999977752 22333222 234 566999999775555542 3
Q ss_pred CcEEEEeCCCCCce-eEEeccCCCCeEEEEEcCCCCEEEEEEec
Q 008196 60 GTLHLWDTTGRSPK-VSWLKQHSAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 60 GtVrLWDl~~~~~l-l~tl~gH~~~VtSVaFSPDG~~LaS~sWD 102 (574)
..|++||+.+.... ...+..+...+.... +++|..|+..+.+
T Consensus 294 ~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~ 336 (741)
T 1yr2_A 294 NTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGD 336 (741)
T ss_dssp CEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECT
T ss_pred ceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECC
Confidence 48999999653111 234555555555554 4899988877643
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.08 E-value=0.084 Score=58.66 Aligned_cols=98 Identities=11% Similarity=0.156 Sum_probs=65.2
Q ss_pred ccCCCCEEEEEeCCC-------------cEEEEECCCCce--eEEecC---CCCCeEEEEEEccCCCeEEEEEeCC---C
Q 008196 2 YNCKDEHLASISLSG-------------DLILHNLASGAK--AAELKD---PNEQVLRVLDYSRNSRHLLVTAGDD---G 60 (574)
Q Consensus 2 FSpDG~~LASGS~DG-------------tVrIWDl~Tg~~--l~t~~g---h~~~Vvs~LafSPdGr~LLaSgS~D---G 60 (574)
|+ ||+.|+.++.|. .|++|++.++.. ...+.. +.... ..+.|+|||++++++...+ .
T Consensus 182 Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~-~~~~~SpDg~~l~~~~~~~~~~~ 259 (693)
T 3iuj_A 182 WL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRY-VGATVTEDDRFLLISAANSTSGN 259 (693)
T ss_dssp EE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSE-EEEEECTTSCEEEEEEESSSSCC
T ss_pred Ee-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEE-EEEEEcCCCCEEEEEEccCCCCc
Confidence 78 999999888774 399999987653 223332 22234 4569999998877776543 5
Q ss_pred cEEEEeCCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEEec
Q 008196 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 61 tVrLWDl~~~~~ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD 102 (574)
.|++||+.+.......+..+...+... |+++|..|+..+..
T Consensus 260 ~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~ 300 (693)
T 3iuj_A 260 RLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNR 300 (693)
T ss_dssp EEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECT
T ss_pred EEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECC
Confidence 899999865432334566666666555 66777777665543
No 216
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.94 E-value=0.029 Score=58.75 Aligned_cols=97 Identities=4% Similarity=-0.006 Sum_probs=67.5
Q ss_pred EEEEeCCC----cEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEe---------CCCcEEEEeCCCCCceeE
Q 008196 9 LASISLSG----DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG---------DDGTLHLWDTTGRSPKVS 75 (574)
Q Consensus 9 LASGS~DG----tVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS---------~DGtVrLWDl~~~~~ll~ 75 (574)
+++...++ +|.++|..+++.+..+...... .+.|+||++++.++.. .+++|.+||+.+... +.
T Consensus 35 yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P---~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v-v~ 110 (368)
T 1mda_H 35 HITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS---LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP-IA 110 (368)
T ss_dssp EEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC---EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE-EE
T ss_pred EEECCccCCccceEEEEECCCCeEEEEEeCCCCC---ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE-EE
Confidence 33444455 7889999999999998755443 4699999987565542 478999999987543 33
Q ss_pred EeccC-------CCCeEEEEEcCCCCEEEEEEecCCcCEEE
Q 008196 76 WLKQH-------SAPTAGISFSSDDKAVSSLCWQRAKPVFI 109 (574)
Q Consensus 76 tl~gH-------~~~VtSVaFSPDG~~LaS~sWD~sg~viv 109 (574)
++.-+ ......++|+|||++++.+.+.....+.+
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V 151 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGL 151 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEE
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEE
Confidence 44322 12356799999999999987654343433
No 217
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=95.94 E-value=0.043 Score=59.53 Aligned_cols=107 Identities=14% Similarity=0.101 Sum_probs=73.3
Q ss_pred ccCCCCEEEEEe-------------------CCCcEEEEECCCCceeEEecCC-CCCeEEEEEE--ccCCCeEEEEEe--
Q 008196 2 YNCKDEHLASIS-------------------LSGDLILHNLASGAKAAELKDP-NEQVLRVLDY--SRNSRHLLVTAG-- 57 (574)
Q Consensus 2 FSpDG~~LASGS-------------------~DGtVrIWDl~Tg~~l~t~~gh-~~~Vvs~Laf--SPdGr~LLaSgS-- 57 (574)
|+|+++.+++.. .+.+|.+||+.+++.+.++... .+..-..|+| +|+++++.+++-
T Consensus 195 ~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~ 274 (462)
T 2ece_A 195 WNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVS 274 (462)
T ss_dssp EETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEE
T ss_pred ECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeee
Confidence 588999888885 3789999999998888887753 2233355566 999987777776
Q ss_pred ---CCCcEEEEeCCCCCc-eeEE--ecc----------------CCCCeEEEEEcCCCCEEEEEEecCCcCEE
Q 008196 58 ---DDGTLHLWDTTGRSP-KVSW--LKQ----------------HSAPTAGISFSSDDKAVSSLCWQRAKPVF 108 (574)
Q Consensus 58 ---~DGtVrLWDl~~~~~-ll~t--l~g----------------H~~~VtSVaFSPDG~~LaS~sWD~sg~vi 108 (574)
.+++|.+|....... ..+. +.. -...+..|.+++||++|..+.|......+
T Consensus 275 ~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~Vav 347 (462)
T 2ece_A 275 LKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQ 347 (462)
T ss_dssp TTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEE
T ss_pred ccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEE
Confidence 788998776633111 1111 000 02347889999999999999987654333
No 218
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.83 E-value=0.034 Score=54.50 Aligned_cols=100 Identities=13% Similarity=0.128 Sum_probs=59.4
Q ss_pred ccCCCCEEEEEeCC---------CcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCC--CC
Q 008196 2 YNCKDEHLASISLS---------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT--GR 70 (574)
Q Consensus 2 FSpDG~~LASGS~D---------GtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~--~~ 70 (574)
++++|+++++...+ ....||.+.....+..+..+.... ..++|+|+++.++++...++.|.+||+. ..
T Consensus 105 ~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~p-ngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G 183 (297)
T 3g4e_A 105 VDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDIS-NGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTG 183 (297)
T ss_dssp ECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBE-EEEEECTTSCEEEEEEGGGTEEEEEEECTTTC
T ss_pred ECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccc-cceEEcCCCCEEEEecCCCCcEEEEeccCCCC
Confidence 67888866654322 334555554322222222222233 6779999997777888888999999973 22
Q ss_pred Cc----eeEEeccCCCCeEEEEEcCCCCEEEEEEecC
Q 008196 71 SP----KVSWLKQHSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 71 ~~----ll~tl~gH~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
.. .+..+..+......+++.++|.+.++ .|..
T Consensus 184 ~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva-~~~~ 219 (297)
T 3g4e_A 184 QISNRRSVYKLEKEEQIPDGMCIDAEGKLWVA-CYNG 219 (297)
T ss_dssp CEEEEEEEEECCGGGCEEEEEEEBTTSCEEEE-EETT
T ss_pred cccCcEEEEECCCCCCCCCeeEECCCCCEEEE-EcCC
Confidence 21 11122334456789999999965544 4443
No 219
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.73 E-value=0.026 Score=59.08 Aligned_cols=86 Identities=6% Similarity=0.089 Sum_probs=62.7
Q ss_pred ccCCCCEEEEEeC---------CCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEe-CCCcEEEEeCCCCC
Q 008196 2 YNCKDEHLASISL---------SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG-DDGTLHLWDTTGRS 71 (574)
Q Consensus 2 FSpDG~~LASGS~---------DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS-~DGtVrLWDl~~~~ 71 (574)
|++||++++.+.. ++.+.++|+.+++.+..+.... .. ..|+|+|||+++++++. .+++|.+||+.+.
T Consensus 271 ~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p-~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~- 347 (368)
T 1mda_H 271 KLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DS-DAIIAAQDGASDNYANSAGTEVLDIYDAASD- 347 (368)
T ss_dssp EETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EE-CEEEECCSSSCEEEEEETTTTEEEEEESSSC-
T ss_pred EcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-Cc-ceEEECCCCCEEEEEccCCCCeEEEEECCCC-
Confidence 6789888776543 2356699999999888776443 33 67799999987888888 6999999999874
Q ss_pred ceeEEeccCCCCeEEEEEcC
Q 008196 72 PKVSWLKQHSAPTAGISFSS 91 (574)
Q Consensus 72 ~ll~tl~gH~~~VtSVaFSP 91 (574)
..+..+.... ..++++|.+
T Consensus 348 kvv~~I~vg~-~P~~i~~~~ 366 (368)
T 1mda_H 348 QDQSSVELDK-GPESLSVQN 366 (368)
T ss_dssp EEEEECCCCS-CCCEEECCC
T ss_pred cEEEEEECCC-CCCEEEeec
Confidence 3444555444 346777654
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.73 E-value=0.088 Score=54.98 Aligned_cols=95 Identities=12% Similarity=0.099 Sum_probs=62.2
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEE----ecCCCC-CeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEE
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAE----LKDPNE-QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t----~~gh~~-~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~t 76 (574)
|++++..|+.+..++.|+.||..++..... ..++.. .....|+|+|++..++++-..++.|+.||..+. +..
T Consensus 226 v~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~---~~~ 302 (409)
T 3hrp_A 226 LDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE---CEW 302 (409)
T ss_dssp ECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC---EEE
T ss_pred EeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC---EEE
Confidence 567444555577788999999987764322 122211 111267999965588888888999999998764 223
Q ss_pred eccCC---------------CCeEEEEEcCCCCEEEEE
Q 008196 77 LKQHS---------------APTAGISFSSDDKAVSSL 99 (574)
Q Consensus 77 l~gH~---------------~~VtSVaFSPDG~~LaS~ 99 (574)
+.++. .....|+|+++|.++++-
T Consensus 303 ~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad 340 (409)
T 3hrp_A 303 FCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVD 340 (409)
T ss_dssp EEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEE
T ss_pred EEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEe
Confidence 33332 347899999999855553
No 221
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.71 E-value=0.033 Score=53.54 Aligned_cols=67 Identities=12% Similarity=0.229 Sum_probs=54.2
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG 69 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~ 69 (574)
|+++|+++++...++.|.+||..+++.+..+..+...+ .+++|+++++.++++...++.|..||+..
T Consensus 233 ~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~-~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 233 FDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKP-SNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCE-EEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred ECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCc-eeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 57889988888889999999998788777777665555 77799999966777777788999999854
No 222
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.66 E-value=0.11 Score=54.24 Aligned_cols=93 Identities=8% Similarity=0.056 Sum_probs=63.0
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCC--cEEEEeCCCCCceeEEe--
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDTTGRSPKVSWL-- 77 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DG--tVrLWDl~~~~~ll~tl-- 77 (574)
|+++|+++++...++.|++||..++........ .... . ++|+++++. |+.++.++ .|.+||..+... ...+
T Consensus 138 ~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~-~-ia~~~~g~~-l~~~d~~~~~~I~~~d~~~~~~-~~~~g~ 212 (409)
T 3hrp_A 138 AVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGG-K-PAVTKDKQR-VYSIGWEGTHTVYVYMKASGWA-PTRIGQ 212 (409)
T ss_dssp ECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBC-B-CEECTTSSE-EEEEBSSTTCEEEEEEGGGTTC-EEEEEE
T ss_pred EeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCC-c-eeEecCCCc-EEEEecCCCceEEEEEcCCCce-eEEeee
Confidence 678898888887889999999987766544443 2233 3 699999855 66666655 788888855332 1122
Q ss_pred -cc-CCCCeEEEEEcCCCCEEEEE
Q 008196 78 -KQ-HSAPTAGISFSSDDKAVSSL 99 (574)
Q Consensus 78 -~g-H~~~VtSVaFSPDG~~LaS~ 99 (574)
.. +...+++++|+|++..|+.+
T Consensus 213 ~~~~~~~~p~~iav~p~~g~lyv~ 236 (409)
T 3hrp_A 213 LGSTFSGKIGAVALDETEEWLYFV 236 (409)
T ss_dssp CCTTSCSCCCBCEECTTSSEEEEE
T ss_pred ccchhcCCcEEEEEeCCCCeEEEE
Confidence 12 45567899999955555553
No 223
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=95.63 E-value=0.045 Score=47.22 Aligned_cols=25 Identities=36% Similarity=0.339 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 548 SILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 548 ~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
.+..++.+|..||++||.|||+||+
T Consensus 62 ~~~~~v~eLe~everL~~ENq~L~~ 86 (104)
T 3s9g_A 62 RLDARVRELELELDRLRAENLQLLT 86 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHH
Confidence 3456778888888888888888886
No 224
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=95.45 E-value=0.016 Score=40.62 Aligned_cols=29 Identities=24% Similarity=0.344 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 546 MSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 546 ~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
|+-+..++++|+.|++.|..|..|||.+|
T Consensus 3 MnQLE~kVEeLl~~n~~Le~eV~rLk~ll 31 (34)
T 2oxj_A 3 MXQLEXKVXELLXKNXHLEXEVXRLKXLV 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 67778899999999999999999999875
No 225
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=95.34 E-value=0.079 Score=51.96 Aligned_cols=92 Identities=10% Similarity=0.176 Sum_probs=59.5
Q ss_pred ccCCCCEEEEEeCC------CcEEEEECCCCce--eEEecC-CCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCc
Q 008196 2 YNCKDEHLASISLS------GDLILHNLASGAK--AAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (574)
Q Consensus 2 FSpDG~~LASGS~D------GtVrIWDl~Tg~~--l~t~~g-h~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ 72 (574)
|++||++|+.+..+ +.|.+||+..+.. ...+.. ..+.+ ..|++.++| .+.++ ..+ .|.+||..+.
T Consensus 195 ~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~p-dgi~~d~~G-~lwv~-~~~-gv~~~~~~g~-- 268 (305)
T 3dr2_A 195 FSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLP-DGFCVDRGG-WLWSS-SGT-GVCVFDSDGQ-- 268 (305)
T ss_dssp ECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCC-CSEEECTTS-CEEEC-CSS-EEEEECTTSC--
T ss_pred EcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCC-CeEEECCCC-CEEEe-cCC-cEEEECCCCC--
Confidence 78999988777665 7899999865431 112211 12222 456899998 43443 344 4999998653
Q ss_pred eeEEeccCCCCeEEEEEcCCCCEEEEEE
Q 008196 73 KVSWLKQHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 73 ll~tl~gH~~~VtSVaFSPDG~~LaS~s 100 (574)
.+..+..+. .+.+++|+++++.|+...
T Consensus 269 ~~~~~~~~~-~~~~~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 269 LLGHIPTPG-TASNCTFDQAQQRLFITG 295 (305)
T ss_dssp EEEEEECSS-CCCEEEECTTSCEEEEEE
T ss_pred EEEEEECCC-ceeEEEEeCCCCEEEEEc
Confidence 333444444 588999999988877665
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.25 E-value=0.042 Score=61.72 Aligned_cols=81 Identities=16% Similarity=0.117 Sum_probs=56.2
Q ss_pred CCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCCCCeEEEEEcCCCC
Q 008196 15 SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDK 94 (574)
Q Consensus 15 DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~~~VtSVaFSPDG~ 94 (574)
+|.|+.||+.+|+.++.+..+.... .. .+...+ .+++.|+.|+.|+.||..+.+.+.....++.....-+.|..+|+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~-~g-~~~tag-glvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~ 530 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFN-GG-TLSTAG-NLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGE 530 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCC-CC-EEEETT-TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred ceeEEEEECCCCCeEeEccCCCCcc-Cc-cceECC-CEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCE
Confidence 4789999999999999887543222 22 455555 56888999999999999875544333334433345577888888
Q ss_pred EEEE
Q 008196 95 AVSS 98 (574)
Q Consensus 95 ~LaS 98 (574)
.++.
T Consensus 531 qyv~ 534 (689)
T 1yiq_A 531 QYVT 534 (689)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6655
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=94.99 E-value=0.035 Score=55.79 Aligned_cols=95 Identities=11% Similarity=0.060 Sum_probs=57.8
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCC-----Cc-----eeE--EecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeC-C
Q 008196 2 YNCKDEHLASISLSGDLILHNLAS-----GA-----KAA--ELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT-T 68 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~T-----g~-----~l~--t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl-~ 68 (574)
|++||++|+.+..++. +||.+.. +. ... ...++.+.. ..|+++++| .++++...++.|.+||. .
T Consensus 202 ~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~p-dgia~d~~G-~l~va~~~~~~V~~~d~~~ 278 (343)
T 2qe8_A 202 LDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKPIC-DGISIDKDH-NIYVGDLAHSAIGVITSAD 278 (343)
T ss_dssp ECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSC-SCEEECTTC-CEEEEEGGGTEEEEEETTT
T ss_pred eccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCCCC-ceEEECCCC-CEEEEccCCCeEEEEECCC
Confidence 6788888887776653 4444321 10 000 111222223 446899998 77888888999999999 5
Q ss_pred CCCceeEEeccCCCCeEEEEEcCCCCEEEEEE
Q 008196 69 GRSPKVSWLKQHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 69 ~~~~ll~tl~gH~~~VtSVaFSPDG~~LaS~s 100 (574)
+. ........+...+.+|+|.+++.++++..
T Consensus 279 G~-~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 279 RA-YKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp TE-EEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred CC-EEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 42 22111112345689999999988777764
No 228
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.87 E-value=0.24 Score=49.28 Aligned_cols=93 Identities=6% Similarity=-0.071 Sum_probs=56.6
Q ss_pred ccCCCCEEEEEeC------CCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCC--CC-Cc
Q 008196 2 YNCKDEHLASISL------SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT--GR-SP 72 (574)
Q Consensus 2 FSpDG~~LASGS~------DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~--~~-~~ 72 (574)
|+++|+++++... .+.|..+| +++. ..+..+.... ..++|+|+++.++++...++.|.+||+. +. ..
T Consensus 141 ~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~-~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~ 216 (326)
T 2ghs_A 141 MHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIP-NSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPT 216 (326)
T ss_dssp ECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSE-EEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBS
T ss_pred ECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCccc-CCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcc
Confidence 6788887665542 23455555 4543 2332222233 6779999997766777778999999985 32 11
Q ss_pred ----eeEEeccCCCCeEEEEEcCCCCEEEE
Q 008196 73 ----KVSWLKQHSAPTAGISFSSDDKAVSS 98 (574)
Q Consensus 73 ----ll~tl~gH~~~VtSVaFSPDG~~LaS 98 (574)
.+..+..+...+.++++.++|.++++
T Consensus 217 ~~~~~~~~~~~~~~~p~gi~~d~~G~lwva 246 (326)
T 2ghs_A 217 GKAEVFIDSTGIKGGMDGSVCDAEGHIWNA 246 (326)
T ss_dssp SCCEEEEECTTSSSEEEEEEECTTSCEEEE
T ss_pred cCceEEEECCCCCCCCCeeEECCCCCEEEE
Confidence 11222333445788999999875554
No 229
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.75 E-value=0.31 Score=52.03 Aligned_cols=107 Identities=12% Similarity=0.152 Sum_probs=66.3
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCcee--EEec--C-C-------CCCeEEEEEEccCCCeEEEEEeC---------CC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKA--AELK--D-P-------NEQVLRVLDYSRNSRHLLVTAGD---------DG 60 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l--~t~~--g-h-------~~~Vvs~LafSPdGr~LLaSgS~---------DG 60 (574)
|.++++.++.....+.|.+.|...+... ..+. . . .... ..++|+|++++++++... ++
T Consensus 272 ~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~-~~va~s~dg~rlyVa~~~~~~gthk~~s~ 350 (426)
T 3c75_H 272 FSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGW-QQTAYHRQSDRIYLLVDQRDEWKHKAASR 350 (426)
T ss_dssp ECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSS-SCEEEEGGGTEEEEEEEECCTTCTTSCEE
T ss_pred ecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCc-eeeEEcCCCCEEEEEecccccccccCCCC
Confidence 4677776666677888888888544321 1111 0 0 0011 124899998776666542 35
Q ss_pred cEEEEeCCCCCceeEEeccCCCCeEEEEEcCCCC-EEEEEEecCCcCEEEec
Q 008196 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDK-AVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 61 tVrLWDl~~~~~ll~tl~gH~~~VtSVaFSPDG~-~LaS~sWD~sg~viv~e 111 (574)
.|.++|+.+.........+. ..++|.|+|||+ ++++..|......+++.
T Consensus 351 ~VsVID~~T~kvv~~I~vg~--~P~gia~spDg~~~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 351 FVVVLNAETGERINKIELGH--EIDSINVSQDAEPLLYALSAGTQTLHIYDA 400 (426)
T ss_dssp EEEEEETTTCCEEEEEEEEE--EECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred EEEEEECCCCeEEEEEECCC--CcCeEEEccCCCEEEEEEcCCCCeEEEEEC
Confidence 79999998754433222232 478999999999 88888876544445554
No 230
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=94.67 E-value=0.032 Score=38.90 Aligned_cols=29 Identities=24% Similarity=0.375 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 546 MSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 546 ~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
|+-+..++++|+.|+..|+.|-.|||.+|
T Consensus 2 M~QLE~kVEeLl~~n~~Le~EV~RLk~Ll 30 (33)
T 3m48_A 2 MAQLEAKVEELLSKNWNLENEVARLKKLV 30 (33)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 56678889999999999999999999876
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=94.58 E-value=0.92 Score=43.23 Aligned_cols=99 Identities=11% Similarity=0.147 Sum_probs=64.2
Q ss_pred ccCCCCEEE-EEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNCKDEHLA-SISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSpDG~~LA-SGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
|+++++.|+ +-..++.|.++|+..+.....+....... ..|++++++..++++....+.|.++|+.+..... .....
T Consensus 43 ~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p-~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~-~~~~~ 120 (267)
T 1npe_A 43 FDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP-EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV-LFDTG 120 (267)
T ss_dssp EETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE-EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-EECSS
T ss_pred EecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc-cEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE-EEECC
Confidence 566555555 44467889999996554433333222345 7789999766877777778899999997643222 12222
Q ss_pred CCCeEEEEEcCCCCEEEEEEec
Q 008196 81 SAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~LaS~sWD 102 (574)
......++++|++..|+...+.
T Consensus 121 ~~~P~~i~vd~~~g~lyv~~~~ 142 (267)
T 1npe_A 121 LVNPRGIVTDPVRGNLYWTDWN 142 (267)
T ss_dssp CSSEEEEEEETTTTEEEEEECC
T ss_pred CCCccEEEEeeCCCEEEEEECC
Confidence 2356899999987777666554
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.54 E-value=0.084 Score=59.09 Aligned_cols=81 Identities=11% Similarity=0.094 Sum_probs=55.6
Q ss_pred CcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCCCCeEEEEEcCCCCE
Q 008196 16 GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKA 95 (574)
Q Consensus 16 GtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~~~VtSVaFSPDG~~ 95 (574)
+.|..||+.+|+.++.+.... .+... .+..++ .+++.++.|+.|++||..+...+.....++.....-+.|..+|+.
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~-~~~~g-~~~~~g-~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~ 533 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVS-PWNGG-TLTTAG-NVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQ 533 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESS-SCCCC-EEEETT-TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cEEEEEeCCCCcEEeecCCCC-CCcCc-ceEeCC-CEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEE
Confidence 789999999999988887432 22122 455666 357778999999999997755544333444444456777788876
Q ss_pred EEEE
Q 008196 96 VSSL 99 (574)
Q Consensus 96 LaS~ 99 (574)
++..
T Consensus 534 ~v~~ 537 (677)
T 1kb0_A 534 YVSV 537 (677)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6553
No 233
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=94.43 E-value=0.035 Score=56.98 Aligned_cols=63 Identities=21% Similarity=0.266 Sum_probs=43.3
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCC
Q 008196 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS 71 (574)
Q Consensus 5 DG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~ 71 (574)
++.+|++++.|+.|+.||..+|+.++.+.. +.+... .+..++ .+++.++.|+.|+.||..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~-p~~~~g-~~~v~~s~dg~l~a~d~~tG~ 70 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQV-PTHVEE-PAFLPDPNDGSLYTLGSKNNE 70 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCC-C------CCEEECTTTCCEEEC-----C
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceec-ceEcCC-CEEEEeCCCCEEEEEECCCCc
Confidence 578999999999999999999999999886 344222 455565 457777899999999995433
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=94.31 E-value=0.03 Score=62.60 Aligned_cols=96 Identities=15% Similarity=0.141 Sum_probs=67.7
Q ss_pred ccCCCCEEEEEe-CCCcEEEEECCCCc------------eeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCC
Q 008196 2 YNCKDEHLASIS-LSGDLILHNLASGA------------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT 68 (574)
Q Consensus 2 FSpDG~~LASGS-~DGtVrIWDl~Tg~------------~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~ 68 (574)
|+|||++++.++ .+.+|.++|+.+.+ .+..+... ... ..++|+++| ++.++.-.|+.|.+||+.
T Consensus 284 ~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~gP-~h~aF~~dG-~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 284 MAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-LGP-LHTAFDGRG-NAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp ECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-SCE-EEEEECTTS-EEEEEETTTTEEEEEEHH
T ss_pred EcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-CCc-ceEEECCCC-eEEEEEecCCcEEEEEhh
Confidence 789999877665 68999999997652 23333322 234 566999999 878888999999999994
Q ss_pred CC---------CceeEEeccCCCCe-----EEEEEcCCCCEEEEEE
Q 008196 69 GR---------SPKVSWLKQHSAPT-----AGISFSSDDKAVSSLC 100 (574)
Q Consensus 69 ~~---------~~ll~tl~gH~~~V-----tSVaFSPDG~~LaS~s 100 (574)
.. ...+..+.-|..+. .++.++|||++|++.+
T Consensus 361 ~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 361 DAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp HHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred HhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 41 23455555555432 2234579999999966
No 235
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=94.21 E-value=0.17 Score=54.82 Aligned_cols=100 Identities=13% Similarity=0.084 Sum_probs=64.0
Q ss_pred CccCCCCEEEEEe------CCCcEEEEECCCCce--eEEe--cCC--C-------------CCeEEEEEEccCCCeEEEE
Q 008196 1 MYNCKDEHLASIS------LSGDLILHNLASGAK--AAEL--KDP--N-------------EQVLRVLDYSRNSRHLLVT 55 (574)
Q Consensus 1 ~FSpDG~~LASGS------~DGtVrIWDl~Tg~~--l~t~--~gh--~-------------~~Vvs~LafSPdGr~LLaS 55 (574)
+|+|+|++++.++ .+++|.+|..+.|.. +..+ ... . ......|.+++||+.|.++
T Consensus 259 ~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVS 338 (462)
T 2ece_A 259 LHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLS 338 (462)
T ss_dssp CSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEE
T ss_pred eECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEE
Confidence 3699999888777 566888777655432 1111 110 0 1223566899999888888
Q ss_pred EeCCCcEEEEeCCC-CC-ceeEEe-cc-------C---C---CCeEEEEEcCCCCEEEEEE
Q 008196 56 AGDDGTLHLWDTTG-RS-PKVSWL-KQ-------H---S---APTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 56 gS~DGtVrLWDl~~-~~-~ll~tl-~g-------H---~---~~VtSVaFSPDG~~LaS~s 100 (574)
.-..+.|.+||+.. .. .++..+ .+ | . ..-..+.++|||++|+.+.
T Consensus 339 nrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 339 LWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred eCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 88889999999842 11 222222 22 1 0 1247899999999998865
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=94.19 E-value=0.21 Score=55.77 Aligned_cols=83 Identities=11% Similarity=0.045 Sum_probs=56.0
Q ss_pred cEEEEECCC--Cce-eEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCC-----------ceeEEeccCCC
Q 008196 17 DLILHNLAS--GAK-AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS-----------PKVSWLKQHSA 82 (574)
Q Consensus 17 tVrIWDl~T--g~~-l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~-----------~ll~tl~gH~~ 82 (574)
.|.|.|..+ ++. +..+.... .. .+|.++|||+++++++..+.+|.++|+.... ..+... .-..
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg~-~P-hGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~ 331 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIAN-NP-HGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGL 331 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEES-SC-CCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCS
T ss_pred cEEEEeCcccCCceeEEEEecCC-Cc-eEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCC
Confidence 477888876 444 44554322 22 4569999999988888899999999996421 112222 2234
Q ss_pred CeEEEEEcCCCCEEEEEEecC
Q 008196 83 PTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 83 ~VtSVaFSPDG~~LaS~sWD~ 103 (574)
..+.++|+++| ++.+..|-.
T Consensus 332 gP~h~aF~~dG-~aY~t~~ld 351 (595)
T 1fwx_A 332 GPLHTAFDGRG-NAYTSLFLD 351 (595)
T ss_dssp CEEEEEECTTS-EEEEEETTT
T ss_pred CcceEEECCCC-eEEEEEecC
Confidence 57899999999 777766544
No 237
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=93.90 E-value=0.64 Score=41.30 Aligned_cols=69 Identities=20% Similarity=0.318 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHH------HHHHHHHHhHHHHHH---HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 503 QLFQRTLEETLDSFQK------SIHEDMRNLHIEILR---QFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 571 (574)
Q Consensus 503 ~~~~~~~~e~l~~~~~------~~~~d~~nlh~e~lr---qf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr 571 (574)
+|||+=|..+.+.++. .+.+=|++|-..|-+ |.+.+-.|+.+-+..+..++.+.-+|+++||+||+-|-
T Consensus 28 ~lLq~qLTqAQe~l~~~eaQAaTCNqTV~tL~~SL~~ekaq~q~~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~~~~ 105 (121)
T 3mq7_A 28 HLLQQELTEAQKGFQDVEAQAATANHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLS 105 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhh
Confidence 4555555555444443 345567777766654 55555667777777778888899999999999998664
No 238
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=93.53 E-value=0.11 Score=40.95 Aligned_cols=36 Identities=28% Similarity=0.364 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 539 ETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 539 ~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
..+|..-.+.+..+..+|.+||..|++|+.+|+++|
T Consensus 24 ~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~l 59 (61)
T 1t2k_D 24 VQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLL 59 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345666677888889999999999999999999874
No 239
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=93.33 E-value=0.16 Score=42.36 Aligned_cols=53 Identities=19% Similarity=0.328 Sum_probs=38.6
Q ss_pred HHHHHhHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 522 EDMRNLHIEILRQFH-MQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 522 ~d~~nlh~e~lrqf~-~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
++=+|.-+-==|+=+ ..++|+..-++++..++..|..||+.|++|+..||.+|
T Consensus 20 R~rNN~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr~ll 73 (78)
T 1gu4_A 20 RERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLF 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444433 33456777778888999999999999999999999885
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=93.21 E-value=2.2 Score=40.57 Aligned_cols=98 Identities=8% Similarity=0.024 Sum_probs=59.6
Q ss_pred ccCCCCEEE-EEeCCCcEEEEECCCCceeEEec-CCCCCeEEEEEEccCCCeEEEEEeC--CCcEEEEeCCCCCceeEEe
Q 008196 2 YNCKDEHLA-SISLSGDLILHNLASGAKAAELK-DPNEQVLRVLDYSRNSRHLLVTAGD--DGTLHLWDTTGRSPKVSWL 77 (574)
Q Consensus 2 FSpDG~~LA-SGS~DGtVrIWDl~Tg~~l~t~~-gh~~~Vvs~LafSPdGr~LLaSgS~--DGtVrLWDl~~~~~ll~tl 77 (574)
|++++..|+ +-..++.|.++++... ....+. ...... ..|+++|++.+++++... .+.|..+++.+..... ..
T Consensus 86 ~d~~~~~lyv~d~~~~~I~~~~~~g~-~~~~~~~~~~~~P-~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~-~~ 162 (267)
T 1npe_A 86 LDHLGRTIFWTDSQLDRIEVAKMDGT-QRRVLFDTGLVNP-RGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRI-LA 162 (267)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSSE-EEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEE-EE
T ss_pred EEecCCeEEEEECCCCEEEEEEcCCC-CEEEEEECCCCCc-cEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEE-EE
Confidence 456555444 4446778999998543 323332 222345 677999976575555543 4788888887643222 12
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEEec
Q 008196 78 KQHSAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 78 ~gH~~~VtSVaFSPDG~~LaS~sWD 102 (574)
.........++|++++..|+.+.+.
T Consensus 163 ~~~~~~P~gia~d~~~~~lyv~d~~ 187 (267)
T 1npe_A 163 QDNLGLPNGLTFDAFSSQLCWVDAG 187 (267)
T ss_dssp CTTCSCEEEEEEETTTTEEEEEETT
T ss_pred ECCCCCCcEEEEcCCCCEEEEEECC
Confidence 2223457899999998888776543
No 241
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=93.13 E-value=0.15 Score=40.61 Aligned_cols=35 Identities=20% Similarity=0.306 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 540 TQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 540 ~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
.+|..-.+.+..++.+|..+|+.|++|++.||++|
T Consensus 26 ~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll 60 (63)
T 1ci6_A 26 EALTGECKELEKKNEALKERADSLAKEIQYLKDLI 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566667788889999999999999999999874
No 242
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=92.94 E-value=0.12 Score=36.02 Aligned_cols=29 Identities=17% Similarity=0.228 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 546 MSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 546 ~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
|+.+..++++|+.|+..|..|-.|||.+|
T Consensus 2 MnQLEdKvEeLl~~~~~Le~EV~RLk~lL 30 (33)
T 3c3g_A 2 MKXIEXKLXEIXSKXYHXENXLARIKXLL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 67778889999999999999999998764
No 243
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=92.85 E-value=0.15 Score=43.23 Aligned_cols=36 Identities=19% Similarity=0.351 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 539 ETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 539 ~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
++|+..-++++..+++.|..||+.|++|+++||.+|
T Consensus 38 ~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll 73 (87)
T 1hjb_A 38 NLETQHKVLELTAENERLQKKVEQLSRELSTLRNLF 73 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667778888899999999999999999999874
No 244
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=92.51 E-value=0.14 Score=35.76 Aligned_cols=29 Identities=17% Similarity=0.346 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 546 MSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 546 ~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
|+-+..++++|+.|+..|..|-.|||.+|
T Consensus 3 MnQLEdKVEeLl~~~~~Le~EV~RLk~ll 31 (34)
T 3c3f_A 3 MXQIEXKLEXILSXLYHXENEXARIXKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 67778889999999999999999998764
No 245
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=92.38 E-value=0.15 Score=39.84 Aligned_cols=36 Identities=8% Similarity=0.292 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 539 ETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 539 ~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
+.|.-..|+.+.+.++.|.+||+.|++||++|...|
T Consensus 22 ~~EVD~FLd~v~~~~~~l~~e~~~L~~~~~~l~~~l 57 (57)
T 2wuj_A 22 EDEVNEFLAQVRKDYEIVLRKKTELEAKVNELDERI 57 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 468889999999999999999999999999998654
No 246
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=92.32 E-value=2.8 Score=41.85 Aligned_cols=94 Identities=15% Similarity=0.093 Sum_probs=59.8
Q ss_pred ccCCCCEEEEEeC--CCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 2 YNCKDEHLASISL--SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 2 FSpDG~~LASGS~--DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
|++||.++++.+. ++.|.+.|+.+++.+..+.-........+++. ++++.++.-.++.|.++|..+.. .+..+..
T Consensus 28 ~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~-v~~~i~~ 104 (266)
T 2iwa_A 28 YAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS-NIKNFTH 104 (266)
T ss_dssp ECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE-EEEEEEC
T ss_pred EeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCc-EEEEEEC
Confidence 6777755555543 68999999999999888764333332344554 55777788889999999997643 3334422
Q ss_pred CCCCeEEEEEcCCCCEEEEEE
Q 008196 80 HSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 80 H~~~VtSVaFSPDG~~LaS~s 100 (574)
-...-+. +++||+.++.+.
T Consensus 105 g~~~g~g--lt~Dg~~l~vs~ 123 (266)
T 2iwa_A 105 QMKDGWG--LATDGKILYGSD 123 (266)
T ss_dssp CSSSCCE--EEECSSSEEEEC
T ss_pred CCCCeEE--EEECCCEEEEEC
Confidence 1111233 445777777653
No 247
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=92.18 E-value=1.1 Score=50.32 Aligned_cols=98 Identities=8% Similarity=0.112 Sum_probs=58.0
Q ss_pred CccCCCCEEEEEeCC-----CcEEEEECCCCce--eEEecCCCCCeEEEEEEccCCCeEEEEEeC--CCcEEEEeCCCCC
Q 008196 1 MYNCKDEHLASISLS-----GDLILHNLASGAK--AAELKDPNEQVLRVLDYSRNSRHLLVTAGD--DGTLHLWDTTGRS 71 (574)
Q Consensus 1 ~FSpDG~~LASGS~D-----GtVrIWDl~Tg~~--l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~--DGtVrLWDl~~~~ 71 (574)
.|++||+.|+....| ..|.+|++.++.. ...+..........+.|+|||++|+++... ...|.++|+.+..
T Consensus 227 ~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~ 306 (751)
T 2xe4_A 227 VWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGN 306 (751)
T ss_dssp EECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCT
T ss_pred EEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCC
Confidence 389999988877765 3688899977642 233332222333556899999887766644 3457778885532
Q ss_pred cee--EEe-ccCCCCeEEEEEcCCCCEEEEE
Q 008196 72 PKV--SWL-KQHSAPTAGISFSSDDKAVSSL 99 (574)
Q Consensus 72 ~ll--~tl-~gH~~~VtSVaFSPDG~~LaS~ 99 (574)
... ..+ .......+++.|+. |..|+..
T Consensus 307 ~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~ 336 (751)
T 2xe4_A 307 AHNTLEIVRPREKGVRYDVQMHG-TSHLVIL 336 (751)
T ss_dssp TCCCEEESSCCCTTCCEEEEEET-TTEEEEE
T ss_pred CCceeEEeecCCCCceEEEeeee-CCEEEEE
Confidence 111 223 33445566666554 4444443
No 248
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=92.02 E-value=0.15 Score=40.31 Aligned_cols=35 Identities=20% Similarity=0.350 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 540 TQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 540 ~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
.||..-++.+..+.++|..||..|++|+.+|+++|
T Consensus 25 ~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~Lk~~l 59 (62)
T 1jnm_A 25 ARLEEKVKTLKAQNSELASTANMLREQVAQLKQKV 59 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666677788889999999999999999999875
No 249
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=91.86 E-value=0.84 Score=45.89 Aligned_cols=91 Identities=12% Similarity=0.162 Sum_probs=58.9
Q ss_pred ccCCCCEEEEEeCCC--cEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 2 YNCKDEHLASISLSG--DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 2 FSpDG~~LASGS~DG--tVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
|+ ++.++.+.+.+| .|+++|+.+|+.+..+.-.....-..|++ +++++.+....++.+.+||..+... +..+..
T Consensus 50 ~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~-~~ti~~ 125 (262)
T 3nol_A 50 YR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQ-VRSFNY 125 (262)
T ss_dssp EE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEEEEETTTCCE-EEEEEC
T ss_pred EE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEE--eCCEEEEEEeeCCEEEEEECccCcE-EEEEEC
Confidence 45 666777777766 89999999999988887544333233344 4557777777899999999977443 333332
Q ss_pred CCCCeEEEEEcCCCCEEEEE
Q 008196 80 HSAPTAGISFSSDDKAVSSL 99 (574)
Q Consensus 80 H~~~VtSVaFSPDG~~LaS~ 99 (574)
.. .-+.++ +|++.|+..
T Consensus 126 ~~-eG~glt--~dg~~L~~S 142 (262)
T 3nol_A 126 DG-EGWGLT--HNDQYLIMS 142 (262)
T ss_dssp SS-CCCCEE--ECSSCEEEC
T ss_pred CC-CceEEe--cCCCEEEEE
Confidence 22 223444 356666553
No 250
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=91.84 E-value=1.5 Score=43.84 Aligned_cols=100 Identities=10% Similarity=0.050 Sum_probs=65.4
Q ss_pred CCCEEEEEe-CCCcEEEEECCCCceeEEecCC-CCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc-C-
Q 008196 5 KDEHLASIS-LSGDLILHNLASGAKAAELKDP-NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ-H- 80 (574)
Q Consensus 5 DG~~LASGS-~DGtVrIWDl~Tg~~l~t~~gh-~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g-H- 80 (574)
+|+.|+... .++.|.++|..+++.+.++... .... .+++||++++++- .++.|.++|..+.........+ +
T Consensus 74 ~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~----glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~ 148 (266)
T 2iwa_A 74 LNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGW----GLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNG 148 (266)
T ss_dssp ETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCC----EEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETT
T ss_pred eCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeE----EEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCC
Confidence 355555444 6889999999999999988743 2222 4567887866654 6889999999775433222222 1
Q ss_pred --CCCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 81 --SAPTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 81 --~~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
-..++.+.|. +| .|+...|......+++.
T Consensus 149 ~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~ 179 (266)
T 2iwa_A 149 HRVIRLNELEYI-NG-EVWANIWQTDCIARISA 179 (266)
T ss_dssp EECCCEEEEEEE-TT-EEEEEETTSSEEEEEET
T ss_pred cccccceeEEEE-CC-EEEEecCCCCeEEEEEC
Confidence 1236788888 66 67777777655555554
No 251
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=91.39 E-value=1.7 Score=37.54 Aligned_cols=35 Identities=20% Similarity=0.134 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 539 ETQMSNVMSSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 539 ~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
..+.-.-+.++..+++.|+.||++|++||+.-|+.
T Consensus 60 ~~~~~~~v~eLe~everL~~ENq~L~~e~~~~~~~ 94 (104)
T 3s9g_A 60 SKRLDARVRELELELDRLRAENLQLLTENELHRQQ 94 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 34445567888889999999999999999998873
No 252
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=91.22 E-value=0.24 Score=34.77 Aligned_cols=29 Identities=21% Similarity=0.456 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 546 MSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 546 ~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
|+-+..++++|..|+..|..|-.|||.+|
T Consensus 3 M~QLEdKVEeLl~~n~~Le~EV~RLk~LL 31 (34)
T 1uo4_A 3 MKQIEDKGEEILSKLYHIENELARIKKLL 31 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 56677888899999999999999998875
No 253
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=91.07 E-value=0.25 Score=34.63 Aligned_cols=29 Identities=21% Similarity=0.367 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 546 MSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 546 ~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
|+-+..++++|..|+..|..|-.|||.+|
T Consensus 3 MnQLEdKvEeLl~~~~~L~~EV~RLk~lL 31 (34)
T 2bni_A 3 MKQIEDKLEEILSKGHHICNELARIKKLL 31 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 66778889999999999999999999875
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=91.05 E-value=1.3 Score=44.71 Aligned_cols=97 Identities=10% Similarity=0.070 Sum_probs=62.3
Q ss_pred EEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEE-eccCC---CC
Q 008196 8 HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW-LKQHS---AP 83 (574)
Q Consensus 8 ~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~t-l~gH~---~~ 83 (574)
++...-.++.+.+||..+.+.+.++....... .+++|+++|+++- .++.|.++|..+....-.. ...+. ..
T Consensus 108 Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGw----GLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~ 182 (268)
T 3nok_A 108 LYQLTWTEGLLFTWSGMPPQRERTTRYSGEGW----GLCYWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVEL 182 (268)
T ss_dssp EEEEESSSCEEEEEETTTTEEEEEEECSSCCC----CEEEETTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred EEEEEccCCEEEEEECCcCcEEEEEeCCCcee----EEecCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCccccc
Confidence 33334478999999999999999998543322 3345676755554 5889999999775433211 11222 23
Q ss_pred eEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 84 TAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 84 VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
++.+.|. +| .|...+|..+...+++.
T Consensus 183 lNeLe~~-dG-~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 183 INELECA-NG-VIYANIWHSSDVLEIDP 208 (268)
T ss_dssp EEEEEEE-TT-EEEEEETTCSEEEEECT
T ss_pred ccccEEe-CC-EEEEEECCCCeEEEEeC
Confidence 5677776 66 57778888765555554
No 255
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=91.01 E-value=0.18 Score=51.63 Aligned_cols=87 Identities=7% Similarity=0.020 Sum_probs=50.8
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCC---CeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 3 NCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNS---RHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 3 SpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdG---r~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
++++..|++++.|+.|+.||..+|+.++.+..+. . ....+..+. .. ++.++.||.|+.||..+...+ +...
T Consensus 127 ~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~-~~~~~~~~~~~~~~-v~~~~~dg~v~a~d~~tG~~~--W~~~ 200 (369)
T 2hz6_A 127 SPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--Y-AASLPEDDVDYKMS-HFVSNGDGLVVTVDSESGDVL--WIQN 200 (369)
T ss_dssp ------EEEEEEEEEEECCCSSSSSCCCEEEEEE--E-CCBCCCCCTTCCCC-EEEEETSCEEEEECTTTCCEE--EEEE
T ss_pred cccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--c-cCccccCCccccce-EEEECCCCEEEEEECCCCcEE--EEec
Confidence 4567788899999999999999998877765321 1 111233321 24 667889999999999764433 2223
Q ss_pred CCCCeEE-EEEcCCCCE
Q 008196 80 HSAPTAG-ISFSSDDKA 95 (574)
Q Consensus 80 H~~~VtS-VaFSPDG~~ 95 (574)
...++.. .+++.+|..
T Consensus 201 ~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 201 YASPVVAFYVWQREGLR 217 (369)
T ss_dssp CSSCEEEEEECTTSSCE
T ss_pred CCCceEEEEEecCCceE
Confidence 3445443 344566643
No 256
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=90.93 E-value=2.2 Score=38.10 Aligned_cols=55 Identities=15% Similarity=0.269 Sum_probs=41.8
Q ss_pred HHHHHHHHhHHH---HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 519 SIHEDMRNLHIE---ILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 519 ~~~~d~~nlh~e---~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
..+.++.+|++| ++.|+..+=++|..-|++...-..+...|++.||.|++.||++
T Consensus 26 ~lk~ele~l~~E~q~~v~ql~~~i~~Le~eL~e~r~~~q~a~~e~e~Lr~e~~~l~~~ 83 (120)
T 3i00_A 26 GLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDELRRQ 83 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555666555 6777778778888888887766778888999999999999865
No 257
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=90.86 E-value=0.4 Score=35.19 Aligned_cols=34 Identities=26% Similarity=0.534 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 541 QMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 541 e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
|+..-..++..+++||.+-|-.|.+||+-|||.|
T Consensus 7 eLE~r~k~le~~naeLEervstLq~EN~mLRqvl 40 (42)
T 2oqq_A 7 ELENRVKDLENKNSELEERLSTLQNENQMLRHIL 40 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 4444556667788999999999999999999974
No 258
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=90.23 E-value=2.5 Score=41.93 Aligned_cols=99 Identities=13% Similarity=0.178 Sum_probs=62.8
Q ss_pred CCEEEE-EeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEE-eccCC--
Q 008196 6 DEHLAS-ISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW-LKQHS-- 81 (574)
Q Consensus 6 G~~LAS-GS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~t-l~gH~-- 81 (574)
++.|.. .-.++.+.+||..+.+.+.++....... .+.+++.+|+++- .++.|.++|..+....-.. ...+.
T Consensus 74 ~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gw----glt~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~~g~~ 148 (243)
T 3mbr_X 74 RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGW----ALTSDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVTAGGRP 148 (243)
T ss_dssp TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCC----EEEECSSCEEEEC-SSSEEEEECTTTCCEEEEEECEETTEE
T ss_pred CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCce----EEeeCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEccCCcc
Confidence 344443 4468999999999999999998544333 3346776766664 4889999999775433211 11222
Q ss_pred -CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 82 -APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 -~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..++.+.|. +| .|...+|..+...+++.
T Consensus 149 ~~~lNeLe~~-~G-~lyanvw~s~~I~vIDp 177 (243)
T 3mbr_X 149 LDNLNELEWV-NG-ELLANVWLTSRIARIDP 177 (243)
T ss_dssp CCCEEEEEEE-TT-EEEEEETTTTEEEEECT
T ss_pred cccceeeEEe-CC-EEEEEECCCCeEEEEEC
Confidence 235666765 44 46688888765555554
No 259
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=89.99 E-value=3.1 Score=39.86 Aligned_cols=87 Identities=18% Similarity=0.181 Sum_probs=58.1
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCCCCeE
Q 008196 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTA 85 (574)
Q Consensus 6 G~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~~~Vt 85 (574)
+..|..++.++.|..+|.. ++.++.+..+...+ .++.+.+++ . |..++.++.|..||..+ .. ...+..+...+.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~-~~~~~~~~g-~-l~vgt~~~~l~~~d~~g-~~-~~~~~~~~~~~~ 180 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIY-ATPIVSEDG-T-IYVGSNDNYLYAINPDG-TE-KWRFKTNDAITS 180 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCC-SCCEECTTS-C-EEEECTTSEEEEECTTS-CE-EEEEECSSCCCS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCcee-eeeEEcCCC-E-EEEEcCCCEEEEECCCC-CE-eEEEecCCCcee
Confidence 3456778888999999997 88777766444333 444666676 4 55577789999999873 32 223333444577
Q ss_pred EEEEcCCCCEEEE
Q 008196 86 GISFSSDDKAVSS 98 (574)
Q Consensus 86 SVaFSPDG~~LaS 98 (574)
++.+..++..++.
T Consensus 181 ~~~~d~~g~l~v~ 193 (330)
T 3hxj_A 181 AASIGKDGTIYFG 193 (330)
T ss_dssp CCEECTTCCEEEE
T ss_pred eeEEcCCCEEEEE
Confidence 7777777776554
No 260
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=89.97 E-value=1 Score=49.32 Aligned_cols=83 Identities=12% Similarity=0.033 Sum_probs=50.2
Q ss_pred CCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCCCCeEEEEEcCCCC
Q 008196 15 SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDK 94 (574)
Q Consensus 15 DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~~~VtSVaFSPDG~ 94 (574)
++.|..||+.+|+.++.+....... .. .+...+.. ++.++.|+.|+.||..+.+.+.....++.....-+.|..+|+
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~~~-~~-~~~t~gg~-v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~ 519 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFAAW-GG-TLYTKGGL-VWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGK 519 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCC-SB-CEEETTTE-EEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred CCeEEEEECCCCCEEEEecCCCCcc-ce-eEEECCCE-EEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCE
Confidence 5789999999999988876432111 11 22223324 666899999999999775544332223222223345667777
Q ss_pred EEEEEE
Q 008196 95 AVSSLC 100 (574)
Q Consensus 95 ~LaS~s 100 (574)
.++...
T Consensus 520 ~yv~~~ 525 (571)
T 2ad6_A 520 QYIGSM 525 (571)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 665543
No 261
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=89.95 E-value=0.48 Score=37.54 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 540 TQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 540 ~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
.||..-.+.+..+.++|.+||+.|++|.++|+.+|
T Consensus 26 ~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~l 60 (63)
T 2wt7_A 26 DTLQAETDQLEDEKSALQTEIANLLKEKEKLEFIL 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666677888889999999999999999999864
No 262
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=89.82 E-value=2 Score=43.15 Aligned_cols=100 Identities=16% Similarity=0.243 Sum_probs=63.4
Q ss_pred CCCEEEEEe-CCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEec-cCC-
Q 008196 5 KDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-QHS- 81 (574)
Q Consensus 5 DG~~LASGS-~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~-gH~- 81 (574)
+++.|.... .++.+.+||..+.+.+.++....... .+++|++.++++- .++.|.++|..+....-.... .+.
T Consensus 95 ~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~----glt~dg~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~V~~~g~ 169 (262)
T 3nol_A 95 WKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGW----GLTHNDQYLIMSD-GTPVLRFLDPESLTPVRTITVTAHGE 169 (262)
T ss_dssp ETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCC----CEEECSSCEEECC-SSSEEEEECTTTCSEEEEEECEETTE
T ss_pred eCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCce----EEecCCCEEEEEC-CCCeEEEEcCCCCeEEEEEEeccCCc
Confidence 344444444 68899999999999999998543333 3446776766654 478899999977543322111 111
Q ss_pred --CCeEEEEEcCCCCEEEEEEecCCcCEEEec
Q 008196 82 --APTAGISFSSDDKAVSSLCWQRAKPVFIDE 111 (574)
Q Consensus 82 --~~VtSVaFSPDG~~LaS~sWD~sg~viv~e 111 (574)
..++.+.|. +| .|...+|..+...+++.
T Consensus 170 ~~~~lNELe~~-~G-~lyan~w~~~~I~vIDp 199 (262)
T 3nol_A 170 ELPELNELEWV-DG-EIFANVWQTNKIVRIDP 199 (262)
T ss_dssp ECCCEEEEEEE-TT-EEEEEETTSSEEEEECT
T ss_pred cccccceeEEE-CC-EEEEEEccCCeEEEEEC
Confidence 235567776 55 57778887665555554
No 263
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=89.54 E-value=1.1 Score=39.67 Aligned_cols=67 Identities=18% Similarity=0.356 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh---------HHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 505 FQRTLEETLDSFQKSIHEDMRNL---------HIEILRQ-FHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 571 (574)
Q Consensus 505 ~~~~~~e~l~~~~~~~~~d~~nl---------h~e~lrq-f~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr 571 (574)
.+..|++.+..-+++.+..|..| .|..||| |-..+++++.-|..+-.....+-.|+.+|.+||+.|+
T Consensus 28 ~r~~Le~~w~~k~E~~k~qV~~L~~~~q~sE~~L~~Lqq~fsq~q~~vq~qL~~Lt~~Re~V~~eL~rLQ~eNd~L~ 104 (112)
T 1x79_B 28 DKQELEDFIKQSSEDSSHQISALVLRAQASEILLEELQQGLSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQ 104 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchh
Confidence 45667778888888888888776 3455554 7778889999999999999999999999999999997
No 264
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=89.54 E-value=8 Score=38.29 Aligned_cols=96 Identities=9% Similarity=0.200 Sum_probs=65.9
Q ss_pred ccCCCC-EEEEEeCCCcEEEEECCCCceeEEecCC-CCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCc--eeEEe
Q 008196 2 YNCKDE-HLASISLSGDLILHNLASGAKAAELKDP-NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP--KVSWL 77 (574)
Q Consensus 2 FSpDG~-~LASGS~DGtVrIWDl~Tg~~l~t~~gh-~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~--ll~tl 77 (574)
|+++++ ++++...++.|...|.. ++.+..+.-. .... ..|++.+++ .++++.-.++.+.++++..... .+...
T Consensus 34 ~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~-EGIa~~~~g-~~~vs~E~~~~l~~~~v~~~~~i~~~~~~ 110 (255)
T 3qqz_A 34 WSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDL-ETIEYIGDN-QFVISDERDYAIYVISLTPNSEVKILKKI 110 (255)
T ss_dssp EETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSE-EEEEECSTT-EEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred EeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCCh-HHeEEeCCC-EEEEEECCCCcEEEEEcCCCCeeeeeeee
Confidence 667766 55557789999999996 8888877522 2344 777999887 6666666778899998854332 11111
Q ss_pred ------ccCCCCeEEEEEcCCCCEEEEEE
Q 008196 78 ------KQHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 78 ------~gH~~~VtSVaFSPDG~~LaS~s 100 (574)
..++.....|+|+|++..|+++.
T Consensus 111 ~~~~~~~~~N~g~EGLA~d~~~~~L~va~ 139 (255)
T 3qqz_A 111 KIPLQESPTNCGFEGLAYSRQDHTFWFFK 139 (255)
T ss_dssp ECCCSSCCCSSCCEEEEEETTTTEEEEEE
T ss_pred ccccccccccCCcceEEEeCCCCEEEEEE
Confidence 12344578999999998888865
No 265
>3q4f_C DNA repair protein XRCC4; DSB repair, nuclear, recombination-recombination complex, DN protein-protein binding complex; HET: DNA; 5.50A {Homo sapiens}
Probab=89.51 E-value=0.39 Score=45.74 Aligned_cols=31 Identities=26% Similarity=0.348 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 542 MSNVMSSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 542 ~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
|+.++.--++..++|..||+.|.+|||||.+
T Consensus 152 irELi~~~L~~i~~L~a~N~hLqkENeRL~~ 182 (186)
T 3q4f_C 152 IRELICYCLDTIAENQAKNEHLQKENERLLR 182 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666678889999999999999999976
No 266
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=89.45 E-value=0.86 Score=38.16 Aligned_cols=24 Identities=29% Similarity=0.614 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHH-------HHHHHHHHHh
Q 008196 549 ILENQAELMKEIKS-------LRKENHQLRQ 572 (574)
Q Consensus 549 ~~~~~~~l~~E~~~-------lr~en~~lr~ 572 (574)
+.++...|..|++. |++||+||++
T Consensus 32 LKekN~~L~~e~~e~~~~~~~L~~en~qLk~ 62 (81)
T 2jee_A 32 LKEKNNSLSQEVQNAQHQREELERENNHLKE 62 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 34444444444444 6667777764
No 267
>3w03_C DNA repair protein XRCC4; coiled-coil, NHEJ, DSBS repair, KU70/80, DNA-PKCS, DNA ligas binding protein; HET: DNA; 8.49A {Homo sapiens}
Probab=89.18 E-value=0.42 Score=45.85 Aligned_cols=29 Identities=28% Similarity=0.345 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 544 NVMSSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 544 ~~~~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
.+++-.++.+++|.++|++|.+||+||++
T Consensus 145 elid~~ld~~~~L~~~n~~LqkeNeRL~~ 173 (184)
T 3w03_C 145 ELICYCLDTIAENQAKNEHLQKENERLLR 173 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555667777777777777777765
No 268
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=89.13 E-value=0.97 Score=44.37 Aligned_cols=97 Identities=8% Similarity=0.013 Sum_probs=59.2
Q ss_pred cCCCCEEEE-EeCCCcEEEEECCC-Cce--eEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEec
Q 008196 3 NCKDEHLAS-ISLSGDLILHNLAS-GAK--AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (574)
Q Consensus 3 SpDG~~LAS-GS~DGtVrIWDl~T-g~~--l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~ 78 (574)
++|+++|+. -...+.|.++|+.. +.. ...+... ... ..|++.++| +++++....+.|.+||..+....+..+.
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P-~gi~vd~dG-~l~va~~~~~~V~~~~~~G~~~~~~~~~ 251 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNI-DDFAFDVEG-NLYGATHIYNSVVRIAPDRSTTIIAQAE 251 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCC-SSEEEBTTC-CEEEECBTTCCEEEECTTCCEEEEECGG
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCC-CCeEECCCC-CEEEEeCCCCeEEEECCCCCEEEEeecc
Confidence 356665544 44678899999864 321 1122111 122 445889998 6666666778999999865311121233
Q ss_pred cCCCCeEEEEEc---CCCCEEEEEEec
Q 008196 79 QHSAPTAGISFS---SDDKAVSSLCWQ 102 (574)
Q Consensus 79 gH~~~VtSVaFS---PDG~~LaS~sWD 102 (574)
......++++|. +++..|+.....
T Consensus 252 ~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 252 QGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp GTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred cccCCceEEEEecccCCCCEEEEECCC
Confidence 333568999998 888888776643
No 269
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=88.88 E-value=0.46 Score=37.82 Aligned_cols=41 Identities=22% Similarity=0.312 Sum_probs=28.3
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 531 ILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 531 ~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
=-|.++.-+.+- ++++..++++|..||..|+.|+++||+.|
T Consensus 20 AArrsR~RK~~~---~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l 60 (63)
T 2dgc_A 20 AARRSRARKLQR---MKQLEDKVEELLSKNYHLENEVARLKKLV 60 (63)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555444332 44556677889999999999999999865
No 270
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=88.58 E-value=0.54 Score=36.44 Aligned_cols=29 Identities=28% Similarity=0.299 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 546 MSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 546 ~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
|+++..+++.|.+||.+|++|+++|++.+
T Consensus 24 ~~~LE~~v~~L~~eN~~L~~~~~~L~~~~ 52 (55)
T 1dh3_A 24 VKSLENRVAVLENQNKTLIEELKALKDLY 52 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45556667889999999999999998753
No 271
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=88.51 E-value=13 Score=36.66 Aligned_cols=100 Identities=12% Similarity=0.052 Sum_probs=60.4
Q ss_pred ccCCCCEEE-EEeCCCcEEEEECCC---CceeEE-ecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEE
Q 008196 2 YNCKDEHLA-SISLSGDLILHNLAS---GAKAAE-LKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (574)
Q Consensus 2 FSpDG~~LA-SGS~DGtVrIWDl~T---g~~l~t-~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~t 76 (574)
|+++++.|+ +-..++.|..+++.. +..... +...-..+ ..|++.+.++.+.++-..++.|.++|+.+..... .
T Consensus 37 ~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p-~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~-~ 114 (316)
T 1ijq_A 37 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP-DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT-L 114 (316)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC-CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEE-E
T ss_pred EEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc-CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEE-E
Confidence 555555444 444578899998865 122222 32222234 5668887666777777788999999997643221 2
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEEecC
Q 008196 77 LKQHSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 77 l~gH~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
..........+++.|.+..|+...|..
T Consensus 115 ~~~~~~~P~~iavdp~~g~ly~~d~~~ 141 (316)
T 1ijq_A 115 FRENGSKPRAIVVDPVHGFMYWTDWGT 141 (316)
T ss_dssp EECTTCCEEEEEEETTTTEEEEEECSS
T ss_pred EECCCCCcceEEeCCCCCEEEEEccCC
Confidence 222334578999999777777666653
No 272
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=88.51 E-value=3.2 Score=39.77 Aligned_cols=85 Identities=9% Similarity=0.024 Sum_probs=55.3
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCCCCe
Q 008196 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPT 84 (574)
Q Consensus 5 DG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~~~V 84 (574)
+|+ |..|+.++.|..+|.. ++.+..+......+ .++.+..++ . |..++ +.|..||..+ . .......+...+
T Consensus 147 ~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~-~~~~~d~~g-~-l~v~t--~~l~~~d~~g-~-~~~~~~~~~~~~ 217 (330)
T 3hxj_A 147 DGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAIT-SAASIGKDG-T-IYFGS--DKVYAINPDG-T-EKWNFYAGYWTV 217 (330)
T ss_dssp TSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCC-SCCEECTTC-C-EEEES--SSEEEECTTS-C-EEEEECCSSCCC
T ss_pred CCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCce-eeeEEcCCC-E-EEEEe--CEEEEECCCC-c-EEEEEccCCcce
Confidence 454 5567788999999998 88877776444333 555677777 4 33333 8899999433 2 233344444568
Q ss_pred EEEEEcCCCCEEEE
Q 008196 85 AGISFSSDDKAVSS 98 (574)
Q Consensus 85 tSVaFSPDG~~LaS 98 (574)
.++.+.++|...+.
T Consensus 218 ~~~~~~~~g~l~v~ 231 (330)
T 3hxj_A 218 TRPAISEDGTIYVT 231 (330)
T ss_dssp SCCEECTTSCEEEE
T ss_pred eceEECCCCeEEEE
Confidence 88888888765554
No 273
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=87.92 E-value=1.3 Score=47.20 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 541 QMSNVMSSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 541 e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
|+...++......++..+|++.||+||++|+.+
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (487)
T 3oja_A 425 EQQSVQNNAIRDWDMYQHKETQLAEENARLKKL 457 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcchhhhhhhhhHHHHHHHHhhhhhhh
Confidence 333444444455666677788888888888764
No 274
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=87.76 E-value=10 Score=38.90 Aligned_cols=100 Identities=15% Similarity=0.119 Sum_probs=62.2
Q ss_pred ccCCCCEEE-EEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNCKDEHLA-SISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSpDG~~LA-SGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
|++.++.|+ +-...+.|..+++..+.....+....... ..|++.+.+..|+++-...+.|.++++.+..... .+...
T Consensus 123 ~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p-~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~-l~~~~ 200 (386)
T 3v65_B 123 FHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESP-GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV-LLWQS 200 (386)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCC-CCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE-EECSS
T ss_pred EecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCc-cEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE-eecCC
Confidence 444444444 44467778888886554333333222233 4558888666877777778899999987643322 23333
Q ss_pred CCCeEEEEEcCCCCEEEEEEecC
Q 008196 81 SAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
-.....|++.|.+..|+..-|..
T Consensus 201 l~~P~giavdp~~g~ly~td~~~ 223 (386)
T 3v65_B 201 LEKPRAIALHPMEGTIYWTDWGN 223 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEECSS
T ss_pred CCCCcEEEEEcCCCeEEEeccCC
Confidence 34578999999888777766654
No 275
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=87.71 E-value=12 Score=36.99 Aligned_cols=88 Identities=9% Similarity=0.001 Sum_probs=56.6
Q ss_pred CCEEEEEeCC--CcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCCCC
Q 008196 6 DEHLASISLS--GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAP 83 (574)
Q Consensus 6 G~~LASGS~D--GtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~~~ 83 (574)
+.++.+.+.+ ..|+++|+.+|+.+..+.-.....-..+++. ++++.+....++.+.+||..+.. .+.++.... .
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~-~~~ti~~~~-~ 106 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLT-PRARFRYPG-E 106 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTE-EEEEEECSS-C
T ss_pred CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCc-EEEEEeCCC-C
Confidence 5566666665 4899999999999988875544332333443 45777777889999999997743 333443222 2
Q ss_pred eEEEEEcCCCCEEEEE
Q 008196 84 TAGISFSSDDKAVSSL 99 (574)
Q Consensus 84 VtSVaFSPDG~~LaS~ 99 (574)
-+.+++ |+..|+..
T Consensus 107 Gwglt~--dg~~L~vS 120 (243)
T 3mbr_X 107 GWALTS--DDSHLYMS 120 (243)
T ss_dssp CCEEEE--CSSCEEEE
T ss_pred ceEEee--CCCEEEEE
Confidence 255554 56555553
No 276
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=87.61 E-value=1.5 Score=48.34 Aligned_cols=96 Identities=15% Similarity=0.119 Sum_probs=57.8
Q ss_pred CCCEEEEEeCCC-----------cEEEEECCCCce--eEEecCCCCCeEEEEEEccCCCeEEEEEe-CCCcEEEEeCCCC
Q 008196 5 KDEHLASISLSG-----------DLILHNLASGAK--AAELKDPNEQVLRVLDYSRNSRHLLVTAG-DDGTLHLWDTTGR 70 (574)
Q Consensus 5 DG~~LASGS~DG-----------tVrIWDl~Tg~~--l~t~~gh~~~Vvs~LafSPdGr~LLaSgS-~DGtVrLWDl~~~ 70 (574)
+|++++.|+.+. .+.+||..+++. +..+...+......+++..++ ++++.|| .+..|.+||..+.
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g-~lyv~GG~~~~~v~~yd~~t~ 275 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNG-QIVVTGGNDAKKTSLYDSSSD 275 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTS-CEEEECSSSTTCEEEEEGGGT
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCC-CEEEeCCCCCCceEEecCcCC
Confidence 788888887543 588999987764 334433333322344777887 6677777 4568999998653
Q ss_pred C-ceeEEeccCCCCeEEEEEcCCCCEEEEEE-ec
Q 008196 71 S-PKVSWLKQHSAPTAGISFSSDDKAVSSLC-WQ 102 (574)
Q Consensus 71 ~-~ll~tl~gH~~~VtSVaFSPDG~~LaS~s-WD 102 (574)
. ..+..+.... .-.++++.++|++++.++ ++
T Consensus 276 ~W~~~~~~~~~R-~~~s~~~~~dg~iyv~GG~~~ 308 (656)
T 1k3i_A 276 SWIPGPDMQVAR-GYQSSATMSDGRVFTIGGSWS 308 (656)
T ss_dssp EEEECCCCSSCC-SSCEEEECTTSCEEEECCCCC
T ss_pred ceeECCCCCccc-cccceEEecCCeEEEEeCccc
Confidence 1 1111111111 124556667888888876 44
No 277
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=87.56 E-value=1.2 Score=49.07 Aligned_cols=81 Identities=16% Similarity=0.151 Sum_probs=49.8
Q ss_pred CCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCCCCeEEEEEcCCCC
Q 008196 15 SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDK 94 (574)
Q Consensus 15 DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~~~VtSVaFSPDG~ 94 (574)
+|.|..||+.+|+.++.+....... .. .....+ .+++.++.|+.++.||..+.+.+.....+......-+.|..+|+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~-~g-~~~tag-glvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~ 541 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLW-AG-VLATAG-NLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE 541 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCC-SC-CEEETT-TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred cceEEEEECCCCCEEEEecCCCCCc-cc-ceEeCC-CEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCE
Confidence 6889999999999988876432111 11 111223 35777999999999999775544322222221122366777887
Q ss_pred EEEE
Q 008196 95 AVSS 98 (574)
Q Consensus 95 ~LaS 98 (574)
.++.
T Consensus 542 qYv~ 545 (582)
T 1flg_A 542 QYLG 545 (582)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 278
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=87.54 E-value=14 Score=37.39 Aligned_cols=100 Identities=15% Similarity=0.119 Sum_probs=62.1
Q ss_pred ccCCCCEEE-EEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNCKDEHLA-SISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSpDG~~LA-SGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
|++.++.|+ +-...+.|..+++..+.....+....... ..|++.+.+..++++-...+.|.++++.+..... .+...
T Consensus 80 ~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p-~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~-l~~~~ 157 (349)
T 3v64_C 80 FHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESP-GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV-LLWQS 157 (349)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC-CEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-EECTT
T ss_pred EeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCc-cEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE-EEeCC
Confidence 444444444 33456778888886544333333222233 5568888666877887778899999997743322 23333
Q ss_pred CCCeEEEEEcCCCCEEEEEEecC
Q 008196 81 SAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
-.....|++.|.+..|+..-|..
T Consensus 158 l~~P~~iavdp~~g~ly~td~~~ 180 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYWTDWGN 180 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEECSS
T ss_pred CCCcceEEEecCcCeEEEeccCC
Confidence 34578999999777777666654
No 279
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=87.53 E-value=0.64 Score=52.08 Aligned_cols=55 Identities=15% Similarity=0.122 Sum_probs=44.0
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeC
Q 008196 4 CKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD 58 (574)
Q Consensus 4 pDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~ 58 (574)
..|.+++.|+.|+.|++||..+|+.++.++...+....-+.|..+|++|++..+-
T Consensus 484 tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 484 TAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred ECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEEec
Confidence 4577899999999999999999999999986654443445788899887776654
No 280
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=87.43 E-value=4.4 Score=33.80 Aligned_cols=29 Identities=10% Similarity=0.217 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 544 NVMSSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 544 ~~~~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
+=+.+...++.+|..|+++||+|.+.||.
T Consensus 45 skL~eae~rn~eL~~e~~~l~~~~eelq~ 73 (81)
T 1wt6_A 45 SQLREAEARNRDLEAHVRQLQERMELLQA 73 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34456688899999999999999999874
No 281
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=87.36 E-value=0.71 Score=32.14 Aligned_cols=29 Identities=17% Similarity=0.145 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 546 MSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 546 ~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
|+.+..++++|..|+..|..|-.|||.+|
T Consensus 2 MnQLEdKVEell~~~~~le~EV~Rl~~ll 30 (33)
T 2wq1_A 2 MKQLEDKIEENTSKIYHNTNEIARNTKLV 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 56677788888888888888888888764
No 282
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=87.07 E-value=4.2 Score=39.78 Aligned_cols=81 Identities=17% Similarity=0.076 Sum_probs=48.7
Q ss_pred CcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCc-eeEEeccCCCCeEEEEEcCCCC
Q 008196 16 GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP-KVSWLKQHSAPTAGISFSSDDK 94 (574)
Q Consensus 16 GtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~-ll~tl~gH~~~VtSVaFSPDG~ 94 (574)
+.|..||..+++....... -... ..|+|+++++.++++-..++.|..||+.+... ....+..... ...|++.++|.
T Consensus 165 g~v~~~d~~~~~~~~~~~~-~~~p-~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~ 241 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKE-LHVP-GGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGH 241 (322)
T ss_dssp EEEEEEETTTTEEEEEEEE-ESCC-CEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSC
T ss_pred ceEEEEeCCCCEEEEeccC-CccC-cceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCC
Confidence 6678888766654222221 1122 45699999866666667778999999864211 1111111222 67889999998
Q ss_pred EEEEE
Q 008196 95 AVSSL 99 (574)
Q Consensus 95 ~LaS~ 99 (574)
++++.
T Consensus 242 l~va~ 246 (322)
T 2fp8_A 242 FWVSS 246 (322)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 65554
No 283
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=86.87 E-value=5.3 Score=43.14 Aligned_cols=96 Identities=14% Similarity=0.253 Sum_probs=59.5
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCc------------eeEEecC------CCCCeEEEEEEccCCCe--EEEEEeCCCc
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGA------------KAAELKD------PNEQVLRVLDYSRNSRH--LLVTAGDDGT 61 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~------------~l~t~~g------h~~~Vvs~LafSPdGr~--LLaSgS~DGt 61 (574)
.||+|++||..+ +..|.|-.+..+. ..+.+.- ....| ..+.|+|.+.. -|++--.|++
T Consensus 73 lSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I-~qVlWHPl~~~ds~LVVLtsD~~ 150 (452)
T 3pbp_A 73 SSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSI-KKVLFHPKSYRDSCIVVLKEDDT 150 (452)
T ss_dssp ECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCE-EEEEECTTBGGGCEEEEEETTSC
T ss_pred ECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCce-eEEEeccccCCCCeEEEEecCCE
Confidence 489999999985 5578888886332 1122221 12345 55599996532 4777889999
Q ss_pred EEEEeCCCCC-ceeEEec---------cCCCCeEEEEEcCCCCEEEEEE
Q 008196 62 LHLWDTTGRS-PKVSWLK---------QHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 62 VrLWDl~~~~-~ll~tl~---------gH~~~VtSVaFSPDG~~LaS~s 100 (574)
|++||+.... ... .+. .+...|.++||..++-.|....
T Consensus 151 Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~ 198 (452)
T 3pbp_A 151 ITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLN 198 (452)
T ss_dssp EEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEE
T ss_pred EEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEe
Confidence 9999995411 111 222 2224577888877665555543
No 284
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=86.80 E-value=0.89 Score=32.26 Aligned_cols=20 Identities=35% Similarity=0.516 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 008196 554 AELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 554 ~~l~~E~~~lr~en~~lr~~ 573 (574)
..-.+||.+||+||++|+.+
T Consensus 17 e~KdeeIa~Lk~eN~eL~El 36 (37)
T 1t6f_A 17 EQKDNEIARLKKENKELAEV 36 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhHHHHhh
Confidence 34457889999999999864
No 285
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=86.46 E-value=4.1 Score=42.74 Aligned_cols=96 Identities=9% Similarity=0.085 Sum_probs=54.0
Q ss_pred ccCCCCEEEEEeC-CC----cEEEEECCCCcee--EEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCc-e
Q 008196 2 YNCKDEHLASISL-SG----DLILHNLASGAKA--AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP-K 73 (574)
Q Consensus 2 FSpDG~~LASGS~-DG----tVrIWDl~Tg~~l--~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~-l 73 (574)
|+++|++|+.+.. ++ .+.+.+. .+... ..+.. .... ..++++|++..++++-..++.|..||..+... .
T Consensus 186 ~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~-~~~p-~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~ 262 (430)
T 3tc9_A 186 WTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTK-GQNC-NGAETHPINGELYFNSWNAGQVFRYDFTTQETTP 262 (430)
T ss_dssp ECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEE-CSSC-CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred EeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeecc-CCCc-eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEE
Confidence 5778885555543 22 2333333 33222 22221 1122 34589994337677776788999999976432 1
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEEe
Q 008196 74 VSWLKQHSAPTAGISFSSDDKAVSSLCW 101 (574)
Q Consensus 74 l~tl~gH~~~VtSVaFSPDG~~LaS~sW 101 (574)
+..... ......|+|+|+|++|+.+.+
T Consensus 263 ~~~~~~-~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 263 LFTIQD-SGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp EEECSS-SSCCEEEEECTTSSEEEEEET
T ss_pred EEEcCC-CCcceeEEEcCCCCEEEEEEC
Confidence 112222 234688999999997766543
No 286
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=86.37 E-value=4.9 Score=40.46 Aligned_cols=94 Identities=12% Similarity=0.057 Sum_probs=63.5
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEecCCCC--C--eEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 4 CKDEHLASISLSGDLILHNLASGAKAAELKDPNE--Q--VLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 4 pDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~--~--Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
+||+.|+.+..++.|.++|..+.+.+..+.-... . .+..|.|. +| .+.+....+..|.+.|..+... +.++.-
T Consensus 143 ~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lyanvw~s~~I~vIDp~TG~V-~~~Idl 219 (268)
T 3nok_A 143 YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG-VIYANIWHSSDVLEIDPATGTV-VGVIDA 219 (268)
T ss_dssp EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTCSEEEEECTTTCBE-EEEEEC
T ss_pred cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC-EEEEEECCCCeEEEEeCCCCcE-EEEEEC
Confidence 5677777777799999999999988877763211 1 22556776 66 6666666788999999976433 222211
Q ss_pred -------------CCCCeEEEEEcCCCCEEEEEE
Q 008196 80 -------------HSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 80 -------------H~~~VtSVaFSPDG~~LaS~s 100 (574)
-.+..+.|+|+|+++.|+..+
T Consensus 220 ~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 220 SALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp HHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 123578999999877666543
No 287
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=86.36 E-value=0.85 Score=32.35 Aligned_cols=28 Identities=14% Similarity=0.261 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 546 MSSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 546 ~~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
|+-+..++++|..|+..|..|-.|||.+
T Consensus 3 MnQLE~KVEeLl~~~~~Le~eV~RLk~l 30 (36)
T 1kd8_B 3 VKQLKAKVEELKSKLWHLKNKVARLKKK 30 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 5556667777777777777777777755
No 288
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=86.31 E-value=9.4 Score=37.17 Aligned_cols=64 Identities=11% Similarity=0.102 Sum_probs=41.3
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeC-CC-cEEEEeCCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD-DG-TLHLWDTTG 69 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~-DG-tVrLWDl~~ 69 (574)
|+++|+++++-..++.|..||... .....+.. ...+ ..|++.++|+ ++++... ++ .|..+|...
T Consensus 39 ~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~~p-~gia~~~dG~-l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 39 SAPDGTIFVTNHEVGEIVSITPDG-NQQIHATV-EGKV-SGLAFTSNGD-LVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTC-CEEEEEEC-SSEE-EEEEECTTSC-EEEEEECTTSCEEEEEECTT
T ss_pred ECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeC-CCCc-eeEEEcCCCc-EEEEeccCCcceEEEEcCCC
Confidence 678888777777889999999854 44333332 2234 7789999985 4554433 32 466667644
No 289
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=86.24 E-value=0.91 Score=50.03 Aligned_cols=96 Identities=7% Similarity=-0.113 Sum_probs=56.5
Q ss_pred CCCEEEEEeCCC-----------cEEEEECCCCceeEEe--cCCCCCeEEEEEEccCCCeEEEEEeCC-----------C
Q 008196 5 KDEHLASISLSG-----------DLILHNLASGAKAAEL--KDPNEQVLRVLDYSRNSRHLLVTAGDD-----------G 60 (574)
Q Consensus 5 DG~~LASGS~DG-----------tVrIWDl~Tg~~l~t~--~gh~~~Vvs~LafSPdGr~LLaSgS~D-----------G 60 (574)
++++++.|+.++ .|.+||..+....... ..+......+++..|++ ++++.||.+ .
T Consensus 410 ~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g-~i~v~GG~~~~~~~~~~~~~~ 488 (656)
T 1k3i_A 410 KGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDG-STFITGGQRRGIPFEDSTPVF 488 (656)
T ss_dssp TTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTS-CEEEECCBSBCCTTCCCSBCC
T ss_pred CCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCC-CEEEECCcccCcCcCCCCccc
Confidence 677888888543 6788888776654433 22222222333567887 667888754 5
Q ss_pred cEEEEeCCCCCce-eEEeccCCCCeEEEEEcCCCCEEEEEEe
Q 008196 61 TLHLWDTTGRSPK-VSWLKQHSAPTAGISFSSDDKAVSSLCW 101 (574)
Q Consensus 61 tVrLWDl~~~~~l-l~tl~gH~~~VtSVaFSPDG~~LaS~sW 101 (574)
.+.+||..+..-. +..+........+..+.+||++++.++.
T Consensus 489 ~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 489 TPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred ceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 6899998553211 1111111222334556789999888774
No 290
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=86.06 E-value=3.4 Score=36.05 Aligned_cols=61 Identities=16% Similarity=0.314 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHH---HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 509 LEETLDSFQKSIHEDMRNLHIEILR---QFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQL 570 (574)
Q Consensus 509 ~~e~l~~~~~~~~~d~~nlh~e~lr---qf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~l 570 (574)
|++.|+.++..+. +|..+|-++|- .-...+.+|..+++++......+...++.|.++|+++
T Consensus 17 I~~~i~~i~~~v~-~l~~~~~~~L~~~~~~~~~~~~l~~l~~~i~~~a~~ik~~Lk~l~~~~~~~ 80 (127)
T 1ez3_A 17 IRGFIDKIAENVE-EVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQE 80 (127)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4556666666665 88999998874 3345678899999999999999999999999998753
No 291
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=85.99 E-value=0.92 Score=31.82 Aligned_cols=29 Identities=14% Similarity=0.261 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 546 MSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 546 ~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
|+-+..++++|..|+..|-.|..|||.+|
T Consensus 3 MnQledKvEel~~~~~~l~nEv~Rl~~lL 31 (34)
T 2r2v_A 3 LKQVADKLEEVASKLYHNANELARVAKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 56667788888888888888888888764
No 292
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=85.94 E-value=27 Score=34.37 Aligned_cols=93 Identities=8% Similarity=0.006 Sum_probs=56.4
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCC-CcEEEEeCCCCCceeEEeccCCCCe
Q 008196 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD-GTLHLWDTTGRSPKVSWLKQHSAPT 84 (574)
Q Consensus 6 G~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~D-GtVrLWDl~~~~~ll~tl~gH~~~V 84 (574)
++++++-..++.|.+.|+........+....... ..|++.|.+..++++.... +.|..+++.+..... .....-...
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P-~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~-~~~~~~~~P 166 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKP-RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS-LVTENIQWP 166 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCE-EEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE-EECSSCSCE
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEECCCCCc-ceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE-EEECCCCCc
Confidence 3344455567888888885333322222223345 6779999766766665443 788888887643221 122233457
Q ss_pred EEEEEcCCCCEEEEEE
Q 008196 85 AGISFSSDDKAVSSLC 100 (574)
Q Consensus 85 tSVaFSPDG~~LaS~s 100 (574)
..|+|++++..|+.+-
T Consensus 167 ~gla~d~~~~~lY~~D 182 (316)
T 1ijq_A 167 NGITLDLLSGRLYWVD 182 (316)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred eEEEEeccCCEEEEEE
Confidence 8999999888777654
No 293
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=85.56 E-value=5 Score=40.78 Aligned_cols=94 Identities=13% Similarity=0.076 Sum_probs=54.6
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCce--eEEec---CCCCCeEEEEEEccC---CCeEEEEEeCC-----CcEEEEeCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAK--AAELK---DPNEQVLRVLDYSRN---SRHLLVTAGDD-----GTLHLWDTT 68 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~--l~t~~---gh~~~Vvs~LafSPd---Gr~LLaSgS~D-----GtVrLWDl~ 68 (574)
|.+||+++++ ..++.|++++ .+.. +..+. ...... ..|+|+|+ +..+.++-..+ +.|..|+..
T Consensus 38 ~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p-~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~ 113 (352)
T 2ism_A 38 FLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGL-LGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHL 113 (352)
T ss_dssp ECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSE-EEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEEC
T ss_pred EcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCc-eeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeC
Confidence 7889986555 5679999998 4432 22221 112334 77899998 44656655433 667778775
Q ss_pred CCC-----ceeEEec---cCCCCeEEEEEcCCCCEEEEE
Q 008196 69 GRS-----PKVSWLK---QHSAPTAGISFSSDDKAVSSL 99 (574)
Q Consensus 69 ~~~-----~ll~tl~---gH~~~VtSVaFSPDG~~LaS~ 99 (574)
... .++..+. +.......|+|.|||..+++.
T Consensus 114 ~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 114 GERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp SSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred CCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 421 1122122 111123689999999766554
No 294
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=85.11 E-value=8.8 Score=37.45 Aligned_cols=94 Identities=7% Similarity=0.030 Sum_probs=57.6
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCC--------------------CCCeEEEEEEcc-CCCeEEEEEeCCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDP--------------------NEQVLRVLDYSR-NSRHLLVTAGDDG 60 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh--------------------~~~Vvs~LafSP-dGr~LLaSgS~DG 60 (574)
|+++|+++.++..++.|..||...+.. ..+... ...+ ..|++.+ ++ .|+++ ...+
T Consensus 26 ~d~~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p-~gi~~~~~~g-~l~v~-d~~~ 101 (322)
T 2fp8_A 26 FDSTNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRT-YDISYNLQNN-QLYIV-DCYY 101 (322)
T ss_dssp CCTTCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCE-EEEEEETTTT-EEEEE-ETTT
T ss_pred EcCCCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCC-ceEEEcCCCC-cEEEE-ECCC
Confidence 667888788888899999999866543 222210 0234 6778997 65 64444 4445
Q ss_pred cEEEEeCCCCCceeEE--ecc-CCCCeEEEEEcC-CCCEEEEE
Q 008196 61 TLHLWDTTGRSPKVSW--LKQ-HSAPTAGISFSS-DDKAVSSL 99 (574)
Q Consensus 61 tVrLWDl~~~~~ll~t--l~g-H~~~VtSVaFSP-DG~~LaS~ 99 (574)
.|..+|..+....... ..+ .......+++.+ +|..+++-
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d 144 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTD 144 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEE
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEEC
Confidence 5888887643221111 111 113468899999 88877664
No 295
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=85.09 E-value=2.9 Score=39.62 Aligned_cols=56 Identities=13% Similarity=0.147 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 513 LDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSS---ILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 513 l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~---~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
|.+++++.+.++..| -.|....+.||..++.. =.+++++|.+|+..||.+....|-
T Consensus 76 l~~I~~e~r~~~~~L----r~ql~akr~EL~aL~~a~~~DeakI~aL~~Ei~~Lr~qL~~~R~ 134 (175)
T 3lay_A 76 AQKIYDDYYTQTSAL----RQQLISKRYEYNALLTASSPDTAKINAVAKEMESLGQKLDEQRV 134 (175)
T ss_dssp HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444433 33445556677777621 025677888888888888777763
No 296
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=85.08 E-value=1.4 Score=49.31 Aligned_cols=55 Identities=18% Similarity=0.138 Sum_probs=42.5
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEe
Q 008196 3 NCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG 57 (574)
Q Consensus 3 SpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS 57 (574)
..++.+++.++.|+.|++||+.+|+.++.+....+....-+.|..+|+.+++..+
T Consensus 485 ~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~ 539 (677)
T 1kb0_A 485 TTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAV 539 (677)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred EeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEec
Confidence 3467788899999999999999999999998665443344577888877666543
No 297
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=84.82 E-value=38 Score=34.82 Aligned_cols=104 Identities=11% Similarity=0.055 Sum_probs=61.3
Q ss_pred ccCCCCEEEEE-eCCCcEEEEECCCC----ceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEE
Q 008196 2 YNCKDEHLASI-SLSGDLILHNLASG----AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (574)
Q Consensus 2 FSpDG~~LASG-S~DGtVrIWDl~Tg----~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~t 76 (574)
|++.++.|+.. ..++.|+.+++... .....+...-..+ ..|++.+.++.|.++-...+.|.+.|+.+..... .
T Consensus 119 ~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p-~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~-l 196 (400)
T 3p5b_L 119 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP-DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT-L 196 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE-EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEE-E
T ss_pred eeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc-ccEEEEecCCceEEEECCCCeEEEEeCCCCceEE-E
Confidence 44444444443 35667777777542 1222222222334 6778888666877777788899999997753322 2
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEEecCCcCE
Q 008196 77 LKQHSAPTAGISFSSDDKAVSSLCWQRAKPV 107 (574)
Q Consensus 77 l~gH~~~VtSVaFSPDG~~LaS~sWD~sg~v 107 (574)
+...-.....|++.|.+..|+..-|.....+
T Consensus 197 ~~~~~~~P~~iavdp~~g~ly~td~~~~~~I 227 (400)
T 3p5b_L 197 FRENGSKPRAIVVDPVHGFMYWTDWGTPAKI 227 (400)
T ss_dssp EECSSCCEEEEEEETTTTEEEEEECSSSCCE
T ss_pred EeCCCCCcceEEEecccCeEEEEeCCCCCEE
Confidence 2223345789999998777776666543343
No 298
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=84.76 E-value=17 Score=36.74 Aligned_cols=95 Identities=12% Similarity=0.070 Sum_probs=58.8
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCC-CcEEEEeCCCCCceeEEeccCCCCe
Q 008196 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD-GTLHLWDTTGRSPKVSWLKQHSAPT 84 (574)
Q Consensus 6 G~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~D-GtVrLWDl~~~~~ll~tl~gH~~~V 84 (574)
++++.+-...+.|.+.++........+...-... ..|++.|.+..++++-..+ +.|..+++.+..... .....-...
T Consensus 128 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P-~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~-~~~~~~~~P 205 (349)
T 3v64_C 128 DKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKP-RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI-IADTHLFWP 205 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECTTCSCE-EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE-SCCSSCSCE
T ss_pred CeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCc-ceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEE-EEECCCCCc
Confidence 3444555567788888885433322232233445 7779999766767776555 889988887643221 122223357
Q ss_pred EEEEEcCCCCEEEEEEec
Q 008196 85 AGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 85 tSVaFSPDG~~LaS~sWD 102 (574)
..|+|++++..|+.+-+.
T Consensus 206 nGla~d~~~~~lY~aD~~ 223 (349)
T 3v64_C 206 NGLTIDYAGRRMYWVDAK 223 (349)
T ss_dssp EEEEEETTTTEEEEEETT
T ss_pred ceEEEeCCCCEEEEEECC
Confidence 899999988877766543
No 299
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=84.71 E-value=1.6 Score=48.49 Aligned_cols=81 Identities=15% Similarity=0.179 Sum_probs=50.3
Q ss_pred CCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCCCCeEEEEEcCCCC
Q 008196 15 SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDK 94 (574)
Q Consensus 15 DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~~~VtSVaFSPDG~ 94 (574)
+|.|..||+.+|+.++.+..+.... .. .+...+ .+++.++.|+.|++||..+...+.....+......-+.|..+|+
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~-~~-~~~t~g-g~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~ 513 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWN-GG-TLSTAG-NLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGR 513 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCC-CC-EEEETT-TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred cceEEEEeCCCCcEEEEccCCCCCc-Cc-eeEeCC-CEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCE
Confidence 4889999999999988877443221 11 333445 45888899999999999775444322222211113345556777
Q ss_pred EEEE
Q 008196 95 AVSS 98 (574)
Q Consensus 95 ~LaS 98 (574)
..++
T Consensus 514 ~yva 517 (668)
T 1kv9_A 514 QYVA 517 (668)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 300
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=84.64 E-value=4.8 Score=38.20 Aligned_cols=70 Identities=13% Similarity=0.262 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHhHHHH---HHHhhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 500 FTLQLFQRTLEETLDSF----QKSIHEDMRNLHIEI---LRQFHMQ----ETQMSNVMSSILENQAELMKEIKSLRKENH 568 (574)
Q Consensus 500 ~~~~~~~~~~~e~l~~~----~~~~~~d~~nlh~e~---lrqf~~~----~~e~~~~~~~~~~~~~~l~~E~~~lr~en~ 568 (574)
-..++|+. |++.|.++ ++.+++.+-...-+| ||+|+.. +.+|..+++.+..+...|.++++.|+++..
T Consensus 9 ~~~~~l~~-Lq~~i~~l~~~~~~~~~e~l~~~q~~lq~sl~~~~~~l~~g~~~L~~~~~~Le~~~~~L~~~i~~l~~~~~ 87 (174)
T 2p22_A 9 NHHEMLQN-LQTVVNELYREDVDYVADKILTRQTVMQESIARFHEIIAIDKNHLRAVEQAIEQTMHSLNAQIDVLTANRA 87 (174)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHHTGGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455554 45555444 445555555544444 6888876 567888899999999999999999998555
Q ss_pred HH
Q 008196 569 QL 570 (574)
Q Consensus 569 ~l 570 (574)
.+
T Consensus 88 k~ 89 (174)
T 2p22_A 88 KV 89 (174)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 301
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=84.60 E-value=0.95 Score=34.89 Aligned_cols=29 Identities=21% Similarity=0.335 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 546 MSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 546 ~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
++.+..++++|..+++.|+++|+.|++.|
T Consensus 21 ~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 21 IELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556667888888888888888887653
No 302
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=84.58 E-value=11 Score=39.37 Aligned_cols=97 Identities=9% Similarity=0.147 Sum_probs=52.3
Q ss_pred ccC-CCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCC----cEEEEeCCCCCceeEE
Q 008196 2 YNC-KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG----TLHLWDTTGRSPKVSW 76 (574)
Q Consensus 2 FSp-DG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DG----tVrLWDl~~~~~ll~t 76 (574)
|+| ++..|+.+...+.|+++|+..+.. ..+....... ..|+|+++|+.++++...++ .|.+++..+.......
T Consensus 144 vdp~~~g~Lyv~d~~~~I~~id~~~~~v-~~~~~~~~~P-~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~ 221 (430)
T 3tc9_A 144 FDPKNHNHLYLVGEQHPTRLIDFEKEYV-STVYSGLSKV-RTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITE 221 (430)
T ss_dssp EETTEEEEEEEEEBTEEEEEEETTTTEE-EEEECCCSCE-EEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEE
T ss_pred ECCCCCCeEEEEeCCCcEEEEECCCCEE-EEEecCCCCc-ceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeee
Confidence 455 344555555558899999965544 3443333445 67799999965666654333 3444444432221122
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEEe
Q 008196 77 LKQHSAPTAGISFSSDDKAVSSLCW 101 (574)
Q Consensus 77 l~gH~~~VtSVaFSPDG~~LaS~sW 101 (574)
+.. .....+++++|++..|+.+.|
T Consensus 222 l~~-~~~p~giavdp~~g~lyv~d~ 245 (430)
T 3tc9_A 222 LTK-GQNCNGAETHPINGELYFNSW 245 (430)
T ss_dssp EEE-CSSCCCEEECTTTCCEEEEET
T ss_pred ecc-CCCceEEEEeCCCCEEEEEEC
Confidence 222 223467889994334444433
No 303
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=84.31 E-value=0.6 Score=35.62 Aligned_cols=22 Identities=41% Similarity=0.646 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhC
Q 008196 553 QAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 553 ~~~l~~E~~~lr~en~~lr~~~ 574 (574)
-++|...|+.||+||-.|||-|
T Consensus 5 YdQL~~QVe~Lk~ENshLrrEL 26 (54)
T 1deb_A 5 YDQLLKQVEALKMENSNLRQEL 26 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHH
Confidence 3677888888888888888753
No 304
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=84.00 E-value=0.84 Score=39.67 Aligned_cols=23 Identities=22% Similarity=0.315 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 008196 551 ENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 551 ~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
+.+..|++||+.|+.||++||+.
T Consensus 12 e~~~~lr~ei~~Le~E~~rLr~~ 34 (100)
T 1go4_E 12 EEADTLRLKVEELEGERSRLEEE 34 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777777777777777753
No 305
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=83.93 E-value=0.92 Score=31.79 Aligned_cols=29 Identities=14% Similarity=0.169 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 546 MSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 546 ~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
|+-+..++++|..|+..|..|-.|||.+|
T Consensus 3 MnQLEdkVEeLl~~~~~Le~eV~RL~~ll 31 (34)
T 2hy6_A 3 VKQLADAVEELASANYHLANAVARLAKAV 31 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 45556677777777777777777777653
No 306
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=83.91 E-value=2.3 Score=35.69 Aligned_cols=21 Identities=33% Similarity=0.461 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 008196 553 QAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 553 ~~~l~~E~~~lr~en~~lr~~ 573 (574)
+..|.+||..|++||++||.+
T Consensus 55 ie~l~eEi~~lk~en~eL~el 75 (83)
T 1uii_A 55 IEQKDNEIARLKKENKELAEV 75 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 445778888888888888864
No 307
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=83.82 E-value=3.1 Score=41.39 Aligned_cols=63 Identities=14% Similarity=0.195 Sum_probs=38.9
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCC
Q 008196 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS 71 (574)
Q Consensus 6 G~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~ 71 (574)
+..|+.++.++.|..+|..+|+.++.........+...... ++ . |+.++.+|.|.+||..+..
T Consensus 277 ~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~-~~-~-l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 277 GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY-NG-N-LVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE-TT-E-EEEECTTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE-CC-E-EEEEeCCCeEEEEECCCCc
Confidence 45666777788888888888887776652222211111221 22 4 6677778888888886643
No 308
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=83.77 E-value=20 Score=41.15 Aligned_cols=93 Identities=13% Similarity=0.048 Sum_probs=56.9
Q ss_pred EEEEeCCCcEEEEECCCC----ceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCCCCe
Q 008196 9 LASISLSGDLILHNLASG----AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPT 84 (574)
Q Consensus 9 LASGS~DGtVrIWDl~Tg----~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~~~V 84 (574)
+.+-...+.|+.+++... .....+......+ ..|++.+.++.|+++-...+.|.+.++.+....+ .+...-...
T Consensus 439 Y~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P-~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~-l~~~~l~~P 516 (791)
T 3m0c_C 439 YWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP-DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT-LFRENGSKP 516 (791)
T ss_dssp EEEETTTTEEEEEEC--------CEEEECSSCSCC-CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEE-EEECTTCCE
T ss_pred EEeeccceeEEEEeccCCCCCcceeEEEecCCCCc-ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEE-EEeCCCCCc
Confidence 334444566777777532 1222232222334 5678888877888888888999999998753322 222333457
Q ss_pred EEEEEcCCCCEEEEEEecC
Q 008196 85 AGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 85 tSVaFSPDG~~LaS~sWD~ 103 (574)
..|++.|.+.+|+..-|..
T Consensus 517 ~gIaVDp~~g~LYwtD~g~ 535 (791)
T 3m0c_C 517 RAIVVDPVHGFMYWTDWGT 535 (791)
T ss_dssp EEEEEETTTTEEEEEECSS
T ss_pred ceEEEecCCCCEEEecCCC
Confidence 8999999877777666654
No 309
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=83.58 E-value=0.99 Score=37.49 Aligned_cols=24 Identities=17% Similarity=0.426 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 550 LENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 550 ~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
.+...+|..|++.||+||++|++.
T Consensus 53 ~~~~~~l~~e~~~L~~e~~~L~~~ 76 (80)
T 1nlw_A 53 EDSDRKAVHQIDQLQREQRHLKRQ 76 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334456677777777777777765
No 310
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=83.56 E-value=0.98 Score=37.35 Aligned_cols=24 Identities=21% Similarity=0.322 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 550 LENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 550 ~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
...+.+|.+|++.|++||++|++.
T Consensus 53 ~~~~~~l~~e~~~L~~~~~~L~~~ 76 (83)
T 1nkp_B 53 RRKNHTHQQDIDDLKRQNALLEQQ 76 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444556667777777777777765
No 311
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=83.10 E-value=1.5 Score=42.04 Aligned_cols=69 Identities=13% Similarity=0.209 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhh
Q 008196 505 FQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEI-KSLRKENHQLRQL 573 (574)
Q Consensus 505 ~~~~~~e~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~-~~lr~en~~lr~~ 573 (574)
|+.-|.+.+.++++.+..||..|+..|.-....++.-+..-++++..++.-..+|+ ++|++..++||+.
T Consensus 89 ~~~~l~~~~e~lr~~l~kdlEelr~kL~P~~eEL~~~l~~~~Eelr~~L~Py~eelr~kl~~~~eeLr~~ 158 (191)
T 1nfn_A 89 TRARLSKELQAAQARLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKR 158 (191)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 34457788899999999999999988776666555544444556666666666666 4566666666654
No 312
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=82.92 E-value=1 Score=31.88 Aligned_cols=27 Identities=19% Similarity=0.219 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 547 SSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 547 ~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
+-+..++++|..|+..|..|-.|||.+
T Consensus 4 nQLE~kVEeLl~~~~~Le~EV~RL~~l 30 (36)
T 1kd8_A 4 KQLEAEVEEIESEVWHLENEVARLEKE 30 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 334445555555555555555555543
No 313
>2jn6_A Protein CGL2762, transposase; GFT PSI-2, protein structure, structural genomics, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: a.4.1.19
Probab=82.69 E-value=0.94 Score=37.64 Aligned_cols=20 Identities=30% Similarity=0.371 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 008196 554 AELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 554 ~~l~~E~~~lr~en~~lr~~ 573 (574)
....+||++|++||.+||..
T Consensus 62 ~~~~~ei~~L~~e~~~L~~e 81 (97)
T 2jn6_A 62 VSEAEQIRQLKKENALQRAR 81 (97)
T ss_dssp HHTHHHHHHHHHCGGGGGGT
T ss_pred CChHHHHHHHHHHHHHHHHH
Confidence 34567888888888888764
No 314
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=82.01 E-value=26 Score=35.85 Aligned_cols=93 Identities=11% Similarity=0.049 Sum_probs=56.9
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCC-CcEEEEeCCCCCceeEEeccCCCCeE
Q 008196 7 EHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD-GTLHLWDTTGRSPKVSWLKQHSAPTA 85 (574)
Q Consensus 7 ~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~D-GtVrLWDl~~~~~ll~tl~gH~~~Vt 85 (574)
+++++-...+.|.+.++........+....... ..|++.|.+..++++-..+ +.|..+++.+..... .....-....
T Consensus 172 ~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P-~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~-~~~~~~~~Pn 249 (386)
T 3v65_B 172 KLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKP-RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI-IADTHLFWPN 249 (386)
T ss_dssp EEEEEETTTTEEEECBTTSCSCEEEECSSCSCE-EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE-EECSSCSCEE
T ss_pred eEEEEcCCCCeEEEEeCCCCceEEeecCCCCCC-cEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEE-EEECCCCCee
Confidence 344444556778888775333322333233445 7779998776766666555 788888887643322 2223333578
Q ss_pred EEEEcCCCCEEEEEEe
Q 008196 86 GISFSSDDKAVSSLCW 101 (574)
Q Consensus 86 SVaFSPDG~~LaS~sW 101 (574)
.|+|++++..|+.+-+
T Consensus 250 Glavd~~~~~lY~aD~ 265 (386)
T 3v65_B 250 GLTIDYAGRRMYWVDA 265 (386)
T ss_dssp EEEEEGGGTEEEEEET
T ss_pred eEEEeCCCCEEEEEEC
Confidence 9999988877776543
No 315
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=80.75 E-value=2.9 Score=35.04 Aligned_cols=19 Identities=42% Similarity=0.520 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 008196 554 AELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 554 ~~l~~E~~~lr~en~~lr~ 572 (574)
.++.+||.+|++||++||-
T Consensus 48 e~~~eEi~~Lk~en~~L~e 66 (83)
T 1wlq_A 48 EQKDSEIARLRKENKDLAE 66 (83)
T ss_dssp HHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3445566677777777764
No 316
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=80.67 E-value=9 Score=40.24 Aligned_cols=67 Identities=6% Similarity=-0.093 Sum_probs=45.6
Q ss_pred ccC-CCCEEEEEeCCCcEEEEECCCCceeEEe-cCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCC
Q 008196 2 YNC-KDEHLASISLSGDLILHNLASGAKAAEL-KDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT 68 (574)
Q Consensus 2 FSp-DG~~LASGS~DGtVrIWDl~Tg~~l~t~-~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~ 68 (574)
+++ +|+++++-..++.|+.+|..++.....+ ..........|+|+|++++|+++-...+.|+.+|+.
T Consensus 235 vd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 235 VHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp ECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 456 5666666667888999999777662332 222222224579999997677777778999998875
No 317
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=80.09 E-value=14 Score=36.60 Aligned_cols=96 Identities=14% Similarity=0.148 Sum_probs=60.3
Q ss_pred ccCCCCEEEEEeCCCcEEEEECC---CCceeEEecC-------CCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLA---SGAKAAELKD-------PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS 71 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~---Tg~~l~t~~g-------h~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~ 71 (574)
|+++++.|.++.......||.+. ....+..+.. +...+ ..|+|+|...++++.....+.|.++|..+.-
T Consensus 128 ~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~-S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~ 206 (255)
T 3qqz_A 128 YSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDV-SGAEFNQQKNTLLVLSHESRALQEVTLVGEV 206 (255)
T ss_dssp EETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCC-CEEEEETTTTEEEEEETTTTEEEEECTTCCE
T ss_pred EeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCc-eeEEEcCCCCeEEEEECCCCeEEEEcCCCCE
Confidence 67778766666655455555553 1112232221 22234 7789999888888888889999999998752
Q ss_pred ceeEEec-cC------CCCeEEEEEcCCCCEEEE
Q 008196 72 PKVSWLK-QH------SAPTAGISFSSDDKAVSS 98 (574)
Q Consensus 72 ~ll~tl~-gH------~~~VtSVaFSPDG~~LaS 98 (574)
.....+. +. -..--.|+|.++|..+++
T Consensus 207 ~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv 240 (255)
T 3qqz_A 207 IGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV 240 (255)
T ss_dssp EEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE
T ss_pred EEEEEcCCccCCcccccCCCCeeEECCCCCEEEE
Confidence 2233333 21 124689999999986655
No 318
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=80.02 E-value=4.9 Score=44.53 Aligned_cols=82 Identities=13% Similarity=0.053 Sum_probs=49.5
Q ss_pred CCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCCCCeEEEEEcCCC
Q 008196 14 LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDD 93 (574)
Q Consensus 14 ~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~~~VtSVaFSPDG 93 (574)
.+|.|..||+.+|+.++...... ..... .+...+ .+++.++.|+.|+.||..+.+.+.....+......-+.|..+|
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~-~~~~g-~~~tag-g~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G 527 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERF-AVWGG-TMATAG-DLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKG 527 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESS-CCCSB-CEEETT-TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETT
T ss_pred CcCeEEEEECCCCCEEeEecCCC-CccCc-ceEecC-CEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCC
Confidence 35789999999999988875321 11111 122233 3477789999999999977554433322222223345666777
Q ss_pred CEEEE
Q 008196 94 KAVSS 98 (574)
Q Consensus 94 ~~LaS 98 (574)
+.++.
T Consensus 528 ~qyv~ 532 (599)
T 1w6s_A 528 TQYVA 532 (599)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 75444
No 319
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=79.71 E-value=15 Score=38.13 Aligned_cols=97 Identities=9% Similarity=0.063 Sum_probs=63.0
Q ss_pred cCCCCEEEEEe-------------CCCcEEEEECC---CCceeEEecCC------------CCCeEEEEEEccCCCeEEE
Q 008196 3 NCKDEHLASIS-------------LSGDLILHNLA---SGAKAAELKDP------------NEQVLRVLDYSRNSRHLLV 54 (574)
Q Consensus 3 SpDG~~LASGS-------------~DGtVrIWDl~---Tg~~l~t~~gh------------~~~Vvs~LafSPdGr~LLa 54 (574)
.++|+++++.. .+..|..+|+. +++.++...-. ....+..|+..++| ...+
T Consensus 74 D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G-naYV 152 (334)
T 2p9w_A 74 DNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG-NSYV 152 (334)
T ss_dssp SSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS-CEEE
T ss_pred CCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCC-CEEE
Confidence 46777777543 26789999998 78876655421 11234777999999 4466
Q ss_pred EEeCC-CcEEEEeCCCCCceeEEec----cCCCCeEEEEEcCCCCEEEEEE
Q 008196 55 TAGDD-GTLHLWDTTGRSPKVSWLK----QHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 55 SgS~D-GtVrLWDl~~~~~ll~tl~----gH~~~VtSVaFSPDG~~LaS~s 100 (574)
+++.. +.|..++..+.......+. ......+.|+|+|+|..|+..-
T Consensus 153 t~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~ 203 (334)
T 2p9w_A 153 AFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFG 203 (334)
T ss_dssp EEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEES
T ss_pred eCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEc
Confidence 77777 8877777766422211111 1122367999999999888753
No 320
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=79.65 E-value=37 Score=35.10 Aligned_cols=100 Identities=10% Similarity=0.145 Sum_probs=62.0
Q ss_pred ccCCCCEEEEEe-CCCcEEEEECCCCceeEE-ecC----CC-CCeEEEEEE---ccCCCeEEEEEe-------------C
Q 008196 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAE-LKD----PN-EQVLRVLDY---SRNSRHLLVTAG-------------D 58 (574)
Q Consensus 2 FSpDG~~LASGS-~DGtVrIWDl~Tg~~l~t-~~g----h~-~~Vvs~Laf---SPdGr~LLaSgS-------------~ 58 (574)
|+..+..|..++ ..++|..||...+..... +.+ .. ......|.| .|++ +|+++.. .
T Consensus 20 wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~g-rL~vv~~~~~af~~~g~~~~g 98 (334)
T 2p9w_A 20 YDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSK-RLFAVMKNAKSFNFADQSSHG 98 (334)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCC-EEEEEEEETTTTCTTSCCSSS
T ss_pred CcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCC-cEEEEEcccccccccccccCC
Confidence 555445555554 799999999975644333 221 11 123478899 6886 6666543 2
Q ss_pred CCcEEEEeCC---CCCcee-EEeccC----------C-CCeEEEEEcCCCCEEEEEEec
Q 008196 59 DGTLHLWDTT---GRSPKV-SWLKQH----------S-APTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 59 DGtVrLWDl~---~~~~ll-~tl~gH----------~-~~VtSVaFSPDG~~LaS~sWD 102 (574)
+..|..||+. +..... .-+... . ..+..|+..++|...++.++.
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~ 157 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG 157 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC
Confidence 6789999998 433332 222211 1 247889999999999987754
No 321
>2l5g_A GPS2 protein, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=79.57 E-value=2.3 Score=30.48 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 541 QMSNVMSSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 541 e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
|-+--++++.+.+..|.++++.|++|-.||=-
T Consensus 5 ee~mTLeEtkeQi~~l~~kl~~LkeEKHQLFl 36 (38)
T 2l5g_A 5 EERMSLEETKEQILKLEEKLLALQEEKHQLFL 36 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445688999999999999999999999843
No 322
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=78.71 E-value=1.7 Score=43.47 Aligned_cols=25 Identities=28% Similarity=0.433 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 548 SILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 548 ~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
.+.+.+.++++|+++||+|+++|++
T Consensus 72 ~L~~~Lk~ar~El~~LkeElerL~s 96 (251)
T 3m9b_A 72 KLMETLKEARQQLLALREEVDRLGQ 96 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3566788899999999999999985
No 323
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=78.69 E-value=1.8 Score=36.47 Aligned_cols=20 Identities=25% Similarity=0.237 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 008196 553 QAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 553 ~~~l~~E~~~lr~en~~lr~ 572 (574)
.+.|.+|++.|+++.++|+.
T Consensus 68 ~~~L~~~n~~L~~rl~~L~~ 87 (88)
T 1nkp_A 68 EDLLRKRREQLKHKLEQLGG 87 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHhhc
Confidence 34566666666666666653
No 324
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=78.45 E-value=57 Score=36.04 Aligned_cols=99 Identities=6% Similarity=0.052 Sum_probs=62.3
Q ss_pred ccCCCCEEE-EEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNCKDEHLA-SISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSpDG~~LA-SGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
|++++..|+ +-..++.|..+++........+...-..+ ..|++.+.++.|.++-...+.|.+.++.+..... .....
T Consensus 44 ~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P-~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~-l~~~~ 121 (628)
T 4a0p_A 44 FDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYP-EGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV-LVWKD 121 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC-CEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE-EECSS
T ss_pred EECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCc-ceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE-EEeCC
Confidence 455555544 44457888888885443333333222334 5668888777877887778899999997753322 22233
Q ss_pred CCCeEEEEEcCCCCEEEEEEec
Q 008196 81 SAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~LaS~sWD 102 (574)
-.....|++.|....|+-.-|.
T Consensus 122 l~~P~~iavdp~~G~lY~tD~g 143 (628)
T 4a0p_A 122 LDSPRALALDPAEGFMYWTEWG 143 (628)
T ss_dssp CCCEEEEEEETTTTEEEEEECS
T ss_pred CCCcccEEEccCCCeEEEeCCC
Confidence 3456899999876677666664
No 325
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=78.42 E-value=58 Score=33.44 Aligned_cols=93 Identities=8% Similarity=0.004 Sum_probs=57.1
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeC-CCcEEEEeCCCCCceeEEeccCCCCe
Q 008196 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD-DGTLHLWDTTGRSPKVSWLKQHSAPT 84 (574)
Q Consensus 6 G~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~-DGtVrLWDl~~~~~ll~tl~gH~~~V 84 (574)
++++.+-...+.|.+.++........+....... ..|++.|.+..|+++-.. .+.|...++.+..... .....-...
T Consensus 171 ~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P-~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~-~~~~~l~~P 248 (400)
T 3p5b_L 171 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKP-RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS-LVTENIQWP 248 (400)
T ss_dssp TEEEEEETTTTEEEEECTTTCSEEEEEECSSCCE-EEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE-EECSSCSCE
T ss_pred CceEEEECCCCeEEEEeCCCCceEEEEeCCCCCc-ceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE-EEECCCCce
Confidence 3444455567778888885444333333233345 777999976576665433 4788888887743322 223333467
Q ss_pred EEEEEcCCCCEEEEEE
Q 008196 85 AGISFSSDDKAVSSLC 100 (574)
Q Consensus 85 tSVaFSPDG~~LaS~s 100 (574)
..|+|++++..|+.+-
T Consensus 249 ~glavd~~~~~lY~aD 264 (400)
T 3p5b_L 249 NGITLDLLSGRLYWVD 264 (400)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred EEEEEEeCCCEEEEEE
Confidence 8999998888777654
No 326
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=78.06 E-value=28 Score=28.88 Aligned_cols=67 Identities=19% Similarity=0.381 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 503 QLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 503 ~~~~~~~~e~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
+-|++-|+|.|+-.|-+++. ++-.|-| |+.++. -+..||+.+..+.++|.++|+-|++.++.|=..|
T Consensus 10 DKLRrrl~E~~~q~qaEl~s-LrrT~~E-L~~G~~---KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL~~~l 76 (78)
T 3iv1_A 10 DKLRWRMKEEMDRAQAELNA-LKRTEED-LKKGHQ---KLEEMVTRLDQEVAEVDKNIELLKKKDEELSSAL 76 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHHHHH-HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhHHHHH-HHHHHHH-HHhhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56667777766666655443 3333333 333433 3667788888889999999999999999986553
No 327
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=77.88 E-value=17 Score=35.88 Aligned_cols=66 Identities=9% Similarity=0.078 Sum_probs=46.1
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEecCCC---------CCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCce
Q 008196 5 KDEHLASISLSGDLILHNLASGAKAAELKDPN---------EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK 73 (574)
Q Consensus 5 DG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~---------~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~l 73 (574)
++..|+.++.++.|..+|..+|+.++.+.... ..+...+.. .++ . ++.++.|+.|..+|..+...+
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~-v~v~~~~g~l~a~d~~tG~~~ 126 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SGG-H-VYIGSEKAQVYALNTSDGTVA 126 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ETT-E-EEEEETTSEEEEEETTTCCEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eCC-E-EEEEcCCCEEEEEECCCCCEE
Confidence 35678888889999999999999988877532 223222222 233 4 667788999999999754433
No 328
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=77.66 E-value=26 Score=34.97 Aligned_cols=91 Identities=11% Similarity=0.037 Sum_probs=54.1
Q ss_pred EEeCCCcEEEEECCCCce-eEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCCCCeEEEEE
Q 008196 11 SISLSGDLILHNLASGAK-AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISF 89 (574)
Q Consensus 11 SGS~DGtVrIWDl~Tg~~-l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~~~VtSVaF 89 (574)
+-...+.|..+++..+.. ...+...-..+ ..|++.+.+..++++-...+.|.++++.+..... ...........|++
T Consensus 52 ~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p-~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~-l~~~~~~~P~giav 129 (318)
T 3sov_A 52 SDVSEEAIKRTEFNKTESVQNVVVSGLLSP-DGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV-LFWQELDQPRAIAL 129 (318)
T ss_dssp EETTTTEEEEEETTSSSCCCEEEEECCSCC-CEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-EECSSCSSEEEEEE
T ss_pred EECCCCcEEEEEccCCCceEEEEcCCCCCc-cEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE-EEeCCCCCccEEEE
Confidence 333456666777654421 11121111223 4568887666777777778899999997743332 22233345789999
Q ss_pred cCCCCEEEEEEecC
Q 008196 90 SSDDKAVSSLCWQR 103 (574)
Q Consensus 90 SPDG~~LaS~sWD~ 103 (574)
.|.+..|+..-|..
T Consensus 130 dp~~g~ly~td~~~ 143 (318)
T 3sov_A 130 DPSSGFMYWTDWGE 143 (318)
T ss_dssp EGGGTEEEEEECSS
T ss_pred eCCCCEEEEEecCC
Confidence 98777777666643
No 329
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=77.57 E-value=60 Score=32.31 Aligned_cols=92 Identities=14% Similarity=0.128 Sum_probs=55.7
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEec-CCCCCeEEEEEEccCCCeEEEEE-eCCCcEEEEeCCCCCceeEEeccCCCC
Q 008196 6 DEHLASISLSGDLILHNLASGAKAAELK-DPNEQVLRVLDYSRNSRHLLVTA-GDDGTLHLWDTTGRSPKVSWLKQHSAP 83 (574)
Q Consensus 6 G~~LASGS~DGtVrIWDl~Tg~~l~t~~-gh~~~Vvs~LafSPdGr~LLaSg-S~DGtVrLWDl~~~~~ll~tl~gH~~~ 83 (574)
++++.+-...+.|.++++. |.....+. ...... ..|++.|.+..++++- +..+.|..+++.+..... .....-..
T Consensus 91 g~ly~~d~~~~~I~~~~~d-G~~~~~l~~~~~~~P-~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~-~~~~~l~~ 167 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLD-GSLRKVLFWQELDQP-RAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI-IINSEIYW 167 (318)
T ss_dssp TEEEEEETTTTEEEEEETT-SCSCEEEECSSCSSE-EEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE-EECSSCSC
T ss_pred CeEEEEECCCCEEEEEECC-CCcEEEEEeCCCCCc-cEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE-EEECCCCC
Confidence 3444455566788888885 33333332 333445 6779998765655554 235788888887643222 22222335
Q ss_pred eEEEEEcCCCCEEEEEE
Q 008196 84 TAGISFSSDDKAVSSLC 100 (574)
Q Consensus 84 VtSVaFSPDG~~LaS~s 100 (574)
-..|+|++++..|+.+-
T Consensus 168 Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp EEEEEEETTTTEEEEEE
T ss_pred ccEEEEeccCCEEEEEE
Confidence 68999999887776654
No 330
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=77.47 E-value=3.1 Score=39.50 Aligned_cols=33 Identities=6% Similarity=0.085 Sum_probs=19.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 008196 498 SNFTLQLFQRTLEETLDSFQKSIHEDMRNLHIEI 531 (574)
Q Consensus 498 ~~~~~~~~~~~~~e~l~~~~~~~~~d~~nlh~e~ 531 (574)
+.-|.+=|+.+.++...+. +.++++|+..|.||
T Consensus 69 T~EQq~ql~~I~~e~r~~~-~~Lr~ql~akr~EL 101 (175)
T 3lay_A 69 TTEQQATAQKIYDDYYTQT-SALRQQLISKRYEY 101 (175)
T ss_dssp CHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 4556666666666655543 34567777777654
No 331
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=77.07 E-value=19 Score=28.86 Aligned_cols=39 Identities=10% Similarity=0.141 Sum_probs=19.8
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 533 RQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 571 (574)
Q Consensus 533 rqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr 571 (574)
..|+.+-.|+......-.+.+.....||..||+..|.|+
T Consensus 31 ~~y~~k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~ 69 (77)
T 3trt_A 31 EWYKSKFADLSEAANRNNDALRQAKQESTEYRRQVQSLT 69 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555655555444444444555555555444443
No 332
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=77.02 E-value=8.5 Score=30.31 Aligned_cols=27 Identities=44% Similarity=0.545 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 547 SSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 547 ~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
+...+++.-|.+++..|..||-.||+.
T Consensus 37 ~~ls~Elr~mQ~~lq~LQsen~~Lr~q 63 (63)
T 2w6a_A 37 SSLSDELRKLQREIHKLQAENLQLRQP 63 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HhhhHHHHHHHHHHHHHHhhhhhhccC
Confidence 555667778888999999999999963
No 333
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=76.43 E-value=2.1 Score=34.86 Aligned_cols=23 Identities=17% Similarity=0.304 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 008196 549 ILENQAELMKEIKSLRKENHQLR 571 (574)
Q Consensus 549 ~~~~~~~l~~E~~~lr~en~~lr 571 (574)
+..++..|..+|..|+.||+.||
T Consensus 48 l~~en~~Lr~~i~~L~~El~~lr 70 (70)
T 1gd2_E 48 TTLENDQLRQKVRQLEEELRILK 70 (70)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Confidence 34445666666666666666654
No 334
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=76.42 E-value=11 Score=39.07 Aligned_cols=61 Identities=8% Similarity=0.069 Sum_probs=43.3
Q ss_pred EEEEEccCCCeEEEEEeCCCcEEEEeCCCCCce--eEEeccCCCCeEEEEEcC-CCCEEEEEEec
Q 008196 41 RVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK--VSWLKQHSAPTAGISFSS-DDKAVSSLCWQ 102 (574)
Q Consensus 41 s~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~l--l~tl~gH~~~VtSVaFSP-DG~~LaS~sWD 102 (574)
..|+|+||++.++++-+..+.|..||+...... ...+ ........+++.. +|.+.+++.|+
T Consensus 224 NGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 224 NGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred CcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 778999999887777778899999998532211 1122 2234567888888 58888777776
No 335
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=75.93 E-value=6 Score=33.22 Aligned_cols=28 Identities=32% Similarity=0.437 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 547 SSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 547 ~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
..+......|..|++.|++||++|++.|
T Consensus 55 ~~L~~~~~~l~~~~~~L~~~n~~L~~rl 82 (88)
T 1nkp_A 55 LSVQAEEQKLISEEDLLRKRREQLKHKL 82 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556677888888888888888753
No 336
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=75.15 E-value=15 Score=39.83 Aligned_cols=19 Identities=42% Similarity=0.434 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 008196 552 NQAELMKEIKSLRKENHQL 570 (574)
Q Consensus 552 ~~~~l~~E~~~lr~en~~l 570 (574)
.+.+|.+|+..+++|.++|
T Consensus 559 ~~~~l~~e~~~~~~~~~~l 577 (597)
T 3oja_B 559 KQAELRQETSLKRQKVKQL 577 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444443
No 337
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=74.94 E-value=23 Score=36.60 Aligned_cols=98 Identities=10% Similarity=0.016 Sum_probs=55.8
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCcee--EEec----CCCCCeEEEEEEccC---CCeEEEEEe--CCCcEEEEeCCCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKA--AELK----DPNEQVLRVLDYSRN---SRHLLVTAG--DDGTLHLWDTTGR 70 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l--~t~~----gh~~~Vvs~LafSPd---Gr~LLaSgS--~DGtVrLWDl~~~ 70 (574)
|.+||.++++--..|.|++++...+... ..+. ...+.. ..|+|+|+ +..+.++-+ .++.|.-|.+...
T Consensus 39 ~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~Gl-lGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~ 117 (347)
T 3das_A 39 PLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGL-LGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEK 117 (347)
T ss_dssp ECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSE-EEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTT
T ss_pred EcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCc-eeeEeccccccCCEEEEEEecCCCCEEEEEEeCCC
Confidence 7899998877755899999987656542 2221 122334 67799995 335555432 3455555655431
Q ss_pred ----------CceeEEec-cCCCCeEEEEEcCCCCEEEEEE
Q 008196 71 ----------SPKVSWLK-QHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 71 ----------~~ll~tl~-gH~~~VtSVaFSPDG~~LaS~s 100 (574)
..++..+. +.......|.|.|||.++++.+
T Consensus 118 ~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 118 KPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp SCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 11111221 1111246799999997666643
No 338
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=74.93 E-value=13 Score=39.32 Aligned_cols=31 Identities=16% Similarity=0.234 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHH---------HHHHhhhHHH
Q 008196 510 EETLDSFQKSIHEDMRNLHIE---------ILRQFHMQET 540 (574)
Q Consensus 510 ~e~l~~~~~~~~~d~~nlh~e---------~lrqf~~~~~ 540 (574)
+++|+++++++.+.|..+..+ |-||+-..|.
T Consensus 372 eeal~~~~~~i~~~l~~~~~~~e~~~~~~~~~~~~~~~~~ 411 (471)
T 3mq9_A 372 DEALKDAQTRITAARDGLRAVMEARNVTHLLQQELTEAQK 411 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhhHHHHHHHHHHHHhh
Confidence 557777777777766666665 7777655443
No 339
>1t72_A Phosphate transport system protein PHOU homolog; helix bundle, structural genomics, BSGC structure funded by NIH, protein structure initiative; 2.90A {Aquifex aeolicus} SCOP: a.7.12.1 PDB: 1t8b_A
Probab=74.48 E-value=5.6 Score=37.63 Aligned_cols=57 Identities=7% Similarity=0.146 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 516 FQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 516 ~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
.++..++++..++-+++||+..-+.-+..+++.|...-.++.+||..+-++..+|..
T Consensus 5 ~~~~~~~~l~~~~~~l~~M~~~v~~~l~~a~~al~~~d~~~a~~v~~~d~~iD~l~~ 61 (227)
T 1t72_A 5 GGMKLFKELEETKEQVIKMAKLVQEAIDKATEALNKQNVELAEEVIKGDDTIDLLEV 61 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHhHHHHHHHHH
Confidence 466778899999999999999999988899988876666677777666666555543
No 340
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=74.47 E-value=14 Score=37.65 Aligned_cols=93 Identities=15% Similarity=0.105 Sum_probs=53.8
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCc-eeEEec---CCCCCeEEEEEEccC---CCeEEEEEeC---C----CcEEEEeC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGA-KAAELK---DPNEQVLRVLDYSRN---SRHLLVTAGD---D----GTLHLWDT 67 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~-~l~t~~---gh~~~Vvs~LafSPd---Gr~LLaSgS~---D----GtVrLWDl 67 (574)
|.+||+++++ ..++.|+++|. .+. .+..+. ...... ..|+|+|+ +..+.++-.. + +.|..|+.
T Consensus 36 ~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~-~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~ 112 (354)
T 3a9g_A 36 PLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGL-LGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRL 112 (354)
T ss_dssp EEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSE-EEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEE
T ss_pred EcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCce-eeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEE
Confidence 6788875555 56799999974 554 222221 112334 67799997 4465665543 3 56777776
Q ss_pred CCCC-------ceeEEec---cCCCCeEEEEEcCCCCEEEEE
Q 008196 68 TGRS-------PKVSWLK---QHSAPTAGISFSSDDKAVSSL 99 (574)
Q Consensus 68 ~~~~-------~ll~tl~---gH~~~VtSVaFSPDG~~LaS~ 99 (574)
.... .++..+. .|. ...|+|.|||.++++.
T Consensus 113 ~~~~~~~~~~~~l~~~~~~~~~h~--~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 113 DGSTFKLKEVKTLIDGIPGAYIHN--GGRIRFGPDGMLYITT 152 (354)
T ss_dssp CSSSCCEEEEEEEEEEEECCSSCC--CCCEEECTTSCEEEEC
T ss_pred CCCCcCcCccEEEEEcCCCCCCcC--CceEEECCCCcEEEEE
Confidence 5421 1111121 233 4679999999866664
No 341
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=74.36 E-value=18 Score=40.05 Aligned_cols=71 Identities=15% Similarity=0.206 Sum_probs=49.4
Q ss_pred ccCCCCEEEEEeCCCc-------------------EEEEECCCCceeEEecCC-C--------CCeEEEEEEccCCC--e
Q 008196 2 YNCKDEHLASISLSGD-------------------LILHNLASGAKAAELKDP-N--------EQVLRVLDYSRNSR--H 51 (574)
Q Consensus 2 FSpDG~~LASGS~DGt-------------------VrIWDl~Tg~~l~t~~gh-~--------~~Vvs~LafSPdGr--~ 51 (574)
|++++.+++.+..++. |..+|..+|+.++.++.. + ... ....+..+|+ .
T Consensus 237 ~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~-~~~d~~~~G~~~~ 315 (668)
T 1kv9_A 237 YDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQI-TLAELNIDGKPRK 315 (668)
T ss_dssp EETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCE-EEEEEEETTEEEE
T ss_pred EcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCc-EEEEeccCCcEEE
Confidence 3456778888877763 999999999999888742 1 122 1113334553 3
Q ss_pred EEEEEeCCCcEEEEeCCCCCce
Q 008196 52 LLVTAGDDGTLHLWDTTGRSPK 73 (574)
Q Consensus 52 LLaSgS~DGtVrLWDl~~~~~l 73 (574)
+++.++.+|.|+++|..+.+.+
T Consensus 316 ~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 316 VLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEEECCTTSEEEEEETTTCCEE
T ss_pred EEEEECCCCEEEEEECCCCCEe
Confidence 6889999999999999765443
No 342
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=74.19 E-value=5.3 Score=38.65 Aligned_cols=20 Identities=35% Similarity=0.516 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 008196 554 AELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 554 ~~l~~E~~~lr~en~~lr~~ 573 (574)
.+|.+||.+|++||++||.+
T Consensus 125 e~l~eEi~~LkeEn~eLkeL 144 (209)
T 2wvr_A 125 EQKDNEIARLKKENKELAEV 144 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34566666666666666653
No 343
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=73.98 E-value=16 Score=39.63 Aligned_cols=14 Identities=36% Similarity=0.404 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHHh
Q 008196 559 EIKSLRKENHQLRQ 572 (574)
Q Consensus 559 E~~~lr~en~~lr~ 572 (574)
.++.|++||+.+|+
T Consensus 559 ~~~~l~~e~~~~~~ 572 (597)
T 3oja_B 559 KQAELRQETSLKRQ 572 (597)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444443
No 344
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=73.68 E-value=19 Score=34.54 Aligned_cols=39 Identities=10% Similarity=0.181 Sum_probs=24.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 535 FHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 535 f~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
...|+..+...-.+....+..|.+|+..||.+|++|+..
T Consensus 72 ~e~~k~K~~~~~~e~~~~~~~Lq~el~~l~~~~~~l~~~ 110 (189)
T 2v71_A 72 VEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKY 110 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444445777788888888888877654
No 345
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=73.32 E-value=4.2 Score=33.41 Aligned_cols=30 Identities=27% Similarity=0.378 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 544 NVMSSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 544 ~~~~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
..++.+.+++.+|++-|.+|..||.-||..
T Consensus 15 EEVevLKe~I~EL~e~~~qLE~EN~~Lk~~ 44 (78)
T 1dip_A 15 EEVEILKEQIRELVEKNSQLERENTLLKTL 44 (78)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345667888999999999999999999975
No 346
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=73.17 E-value=11 Score=30.47 Aligned_cols=24 Identities=25% Similarity=0.278 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 549 ILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 549 ~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
+......|..||+.||.++++|+.
T Consensus 41 le~~~~~l~~en~~Lr~~i~~L~~ 64 (70)
T 1gd2_E 41 LKELHSSTTLENDQLRQKVRQLEE 64 (70)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445566677777777766654
No 347
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=72.99 E-value=4.4 Score=44.48 Aligned_cols=61 Identities=13% Similarity=0.207 Sum_probs=43.8
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeC-CCcEEEE
Q 008196 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD-DGTLHLW 65 (574)
Q Consensus 5 DG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~-DGtVrLW 65 (574)
.+.+++.|+.|+.++.||..+|+.++.++...+....-+.|..+|+.|++..+- .+.+-+|
T Consensus 496 agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G~gg~~~~~ 557 (582)
T 1flg_A 496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTVGYGGAVPLW 557 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCSHHHHH
T ss_pred CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEEccCCCccccc
Confidence 356888899999999999999999999986554332334677888776766543 4433333
No 348
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=72.98 E-value=21 Score=39.65 Aligned_cols=65 Identities=17% Similarity=0.264 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHhh
Q 008196 509 LEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELM-----KEIKSLRKENHQLRQL 573 (574)
Q Consensus 509 ~~e~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~-----~E~~~lr~en~~lr~~ 573 (574)
++..|..-+++..+-|+-|+-.|-+-=+.+..|+..+++.=+.+|++|+ +|.+.|++|.++|++.
T Consensus 513 ~~~~~~~~~~~~~e~~~ql~~kme~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ei~~l~~~ 582 (592)
T 1f5n_A 513 NEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTK 582 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445666677777778888888887777888888888888777777765 4688888888888864
No 349
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=72.96 E-value=22 Score=34.71 Aligned_cols=76 Identities=11% Similarity=0.073 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH---HHHHHHhHHHH-----------HHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 499 NFTLQLFQRTLEETLDSFQKSI---HEDMRNLHIEI-----------LRQFHMQ-ETQMSNVMSSILENQAELMKEIKSL 563 (574)
Q Consensus 499 ~~~~~~~~~~~~e~l~~~~~~~---~~d~~nlh~e~-----------lrqf~~~-~~e~~~~~~~~~~~~~~l~~E~~~l 563 (574)
.++|+-.|+.-+.+..|+-..+ |.-.+--+|+. .+|+|.. ..+|..-|+.+...+..+++|.+..
T Consensus 164 ~~~l~~~Rk~f~~~~ldyv~~l~~l~~kk~~e~le~l~~~~~a~~~ff~~g~e~~~~~~~p~~~~l~~~l~~~r~~~~~~ 243 (265)
T 2q12_A 164 TEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREMDSD 243 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666777776666665544 22222223333 3444444 3488888888899999999999999
Q ss_pred HHHHHHHHhhC
Q 008196 564 RKENHQLRQLL 574 (574)
Q Consensus 564 r~en~~lr~~~ 574 (574)
|++-+++|+.|
T Consensus 244 ~~~~~~~~~~l 254 (265)
T 2q12_A 244 IETMQQTIEDL 254 (265)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988864
No 350
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=72.46 E-value=23 Score=37.57 Aligned_cols=98 Identities=7% Similarity=0.138 Sum_probs=54.6
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCcee--EEecC------CCCCeEEEEEEccC---CCeEEEEEeC------------
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKA--AELKD------PNEQVLRVLDYSRN---SRHLLVTAGD------------ 58 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l--~t~~g------h~~~Vvs~LafSPd---Gr~LLaSgS~------------ 58 (574)
|.+||+++++-...+.|++++..++... ..+.. ..+.. ..|+|+|+ +..|.++-..
T Consensus 34 ~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gl-lgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~ 112 (454)
T 1cru_A 34 WGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGL-LGFAFHPDFKNNPYIYISGTFKNPKSTDKELPN 112 (454)
T ss_dssp ECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSE-EEEEECTTTTTSCEEEEEEEEECTTC--CCSCE
T ss_pred EcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCce-eEEEECCCcCcCCEEEEEEeccccCCCcccccc
Confidence 6789997777644457888887556542 22321 12234 57799995 4465665543
Q ss_pred CCcEEEEeCCCCC-------ceeEEec-cCCCCeEEEEEcCCCCEEEEEE
Q 008196 59 DGTLHLWDTTGRS-------PKVSWLK-QHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 59 DGtVrLWDl~~~~-------~ll~tl~-gH~~~VtSVaFSPDG~~LaS~s 100 (574)
...|.-|++.... .++..+. ........|+|.|||.++++.+
T Consensus 113 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 113 QTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 2345555543211 1111121 1122478999999998666543
No 351
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=72.31 E-value=17 Score=34.07 Aligned_cols=55 Identities=11% Similarity=0.207 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 506 QRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEI 560 (574)
Q Consensus 506 ~~~~~e~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~ 560 (574)
+.-|.....++|+.+..||.-++-.|-=-....+.=+..=|++|..+++=+.+|+
T Consensus 73 ~~~l~~~~~~Lr~~l~kdlee~r~~l~P~~~e~~~~~~~~~e~lr~~l~Py~~el 127 (185)
T 3r2p_A 73 WDNLEKETEGLRQEMSKDLEEVKAKVQPYLDDFQKKWQEEMELYRQKVEPLRAEL 127 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3334444556666666666655544433333333333333344444444444433
No 352
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=71.93 E-value=83 Score=35.95 Aligned_cols=92 Identities=11% Similarity=0.019 Sum_probs=57.2
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEec-CCCCCeEEEEEEccCCCeEEEEEeC-CCcEEEEeCCCCCceeEEeccCCCCe
Q 008196 7 EHLASISLSGDLILHNLASGAKAAELK-DPNEQVLRVLDYSRNSRHLLVTAGD-DGTLHLWDTTGRSPKVSWLKQHSAPT 84 (574)
Q Consensus 7 ~~LASGS~DGtVrIWDl~Tg~~l~t~~-gh~~~Vvs~LafSPdGr~LLaSgS~-DGtVrLWDl~~~~~ll~tl~gH~~~V 84 (574)
+++.+-...+.|.+.++. |.....+. ..-... ..|++.|.+.+|+++-.. .+.|...++.+..... .+...-...
T Consensus 484 ~LY~tD~~~~~I~v~~ld-G~~~~~l~~~~l~~P-~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~-lv~~~l~~P 560 (791)
T 3m0c_C 484 NIYWTDSVLGTVSVADTK-GVKRKTLFRENGSKP-RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS-LVTENIQWP 560 (791)
T ss_dssp EEEEEETTTTEEEEEETT-SSSEEEEEECTTCCE-EEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE-EECSSCSCE
T ss_pred cEEEEecCCCeEEEEeCC-CCeEEEEEeCCCCCc-ceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE-EEeCCCCCc
Confidence 344455567788888885 44333433 233345 778999976576665433 3788888887743322 233333467
Q ss_pred EEEEEcCCCCEEEEEEe
Q 008196 85 AGISFSSDDKAVSSLCW 101 (574)
Q Consensus 85 tSVaFSPDG~~LaS~sW 101 (574)
..|++.+.+..|+.+-+
T Consensus 561 ~GLavD~~~~~LYwaD~ 577 (791)
T 3m0c_C 561 NGITLDLLSGRLYWVDS 577 (791)
T ss_dssp EEEEEETTTTEEEEEET
T ss_pred eEEEEecCCCeEEEEeC
Confidence 89999988777776643
No 353
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=71.89 E-value=3.4 Score=34.28 Aligned_cols=27 Identities=26% Similarity=0.201 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 547 SSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 547 ~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
.++.....+|.+||..||.|.++|+..
T Consensus 39 ~e~~~r~~~L~~eN~~L~~~v~~L~~E 65 (78)
T 1gu4_A 39 LETQHKVLELTAENERLQKKVEQLSRE 65 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566788888888888888888753
No 354
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=71.70 E-value=7.2 Score=27.68 Aligned_cols=28 Identities=29% Similarity=0.313 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 541 QMSNVMSSILENQAELMKEIKSLRKENH 568 (574)
Q Consensus 541 e~~~~~~~~~~~~~~l~~E~~~lr~en~ 568 (574)
++..-++++..+..+|..||.+||+.+-
T Consensus 5 QLE~kVEeLl~~~~~Le~EV~RL~~ll~ 32 (36)
T 1kd8_A 5 QLEAEVEEIESEVWHLENEVARLEKENA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 4556678888889999999999999874
No 355
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=71.69 E-value=77 Score=34.89 Aligned_cols=100 Identities=9% Similarity=0.028 Sum_probs=60.2
Q ss_pred ccCCCCEEEEEe-CCCcEEEEECCCCce-eEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 2 YNCKDEHLASIS-LSGDLILHNLASGAK-AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 2 FSpDG~~LASGS-~DGtVrIWDl~Tg~~-l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
|++.++.|+... ..+.|..+++..... ...+...-..+ ..|++.+.++.++++-...+.|.+.|+.+..... ....
T Consensus 47 ~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P-~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~-l~~~ 124 (619)
T 3s94_A 47 FVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSP-DGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV-LFWQ 124 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCE-EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-EECS
T ss_pred EEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCc-CeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEE-EEeC
Confidence 455555555444 456777777754322 22333222345 7789999777878887788999999998753322 2223
Q ss_pred CCCCeEEEEEcCCCCEEEEEEecC
Q 008196 80 HSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 80 H~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
.-.....|++.|.+..|+-.-|..
T Consensus 125 ~l~~P~~Iavdp~~g~ly~tD~g~ 148 (619)
T 3s94_A 125 ELDQPRAIALDPSSGFMYWTDWGE 148 (619)
T ss_dssp SCSCCCCEEEETTTTEEEEEECSS
T ss_pred CCCCCceEEEecCCCeEEEeccCC
Confidence 333467899998766666655653
No 356
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=70.99 E-value=11 Score=42.17 Aligned_cols=95 Identities=13% Similarity=0.054 Sum_probs=63.5
Q ss_pred ccCCCCEEEEEe-CCCcEEEEECCCC------ce-------eEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeC
Q 008196 2 YNCKDEHLASIS-LSGDLILHNLASG------AK-------AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT 67 (574)
Q Consensus 2 FSpDG~~LASGS-~DGtVrIWDl~Tg------~~-------l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl 67 (574)
++|||+|++.++ .+.+|.|+|+.+- +. +...... -.. ...+|.++| +...|.-.|..|.-|++
T Consensus 330 vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G-lGP-lHt~Fd~~G-~aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 330 TSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG-LGP-LHTTFDGRG-NAYTTLFIDSQVVKWNM 406 (638)
T ss_dssp ECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC-SCE-EEEEECSSS-EEEEEETTTTEEEEEEH
T ss_pred eCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC-Ccc-cEEEECCCC-ceEeeeeecceEEEEec
Confidence 579999888766 6999999999741 11 2233322 234 334999998 76777789999999998
Q ss_pred CC-------C--CceeEEeccCCCCeEEEEE------cCCCCEEEEEE
Q 008196 68 TG-------R--SPKVSWLKQHSAPTAGISF------SSDDKAVSSLC 100 (574)
Q Consensus 68 ~~-------~--~~ll~tl~gH~~~VtSVaF------SPDG~~LaS~s 100 (574)
.. . ...+..+.-|-.+- .+.- .+||++|++.+
T Consensus 407 ~~a~~~~~g~~~~~v~~k~dv~YqpG-H~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 407 EEAVRAYKGEKVNYIKQKLDVHYQPG-HLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp HHHHHHHTTCCCCCEEEEEECSSCEE-EEEETTTTSTTCCSCEEEEEE
T ss_pred cHHHHHhcCccCCeeeeccccccCCc-ccccCCCccCCCCccEEEEec
Confidence 32 1 13455566666543 3333 47999999965
No 357
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=70.96 E-value=3.6 Score=34.85 Aligned_cols=39 Identities=21% Similarity=0.162 Sum_probs=23.7
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 532 LRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 532 lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
.|..+.-+.+-. +++.....+|.+||..||.|.++|...
T Consensus 27 arrSR~krk~r~---~e~~~r~~~Le~EN~~Lr~~v~~L~~E 65 (87)
T 1hjb_A 27 VRKSRDKAKMRN---LETQHKVLELTAENERLQKKVEQLSRE 65 (87)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445554333322 233455677888888888888887653
No 358
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=70.65 E-value=6.9 Score=27.44 Aligned_cols=27 Identities=19% Similarity=0.266 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 540 TQMSNVMSSILENQAELMKEIKSLRKE 566 (574)
Q Consensus 540 ~e~~~~~~~~~~~~~~l~~E~~~lr~e 566 (574)
+++..-++++..+..+|.+||++||.=
T Consensus 4 nQLE~kVEeLl~~n~~Le~eV~rLk~l 30 (34)
T 2oxj_A 4 XQLEXKVXELLXKNXHLEXEVXRLKXL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 345566788888899999999999964
No 359
>1wmi_B RELB, hypothetical protein PHS014; toxin-antitoxin complex, hydrolase-hydrolase inhibitor compl; 2.30A {Pyrococcus horikoshii} SCOP: a.137.13.1
Probab=70.61 E-value=2.5 Score=33.36 Aligned_cols=23 Identities=26% Similarity=0.540 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Q 008196 552 NQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 552 ~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
++.+.++|+++||.|.|||-.+|
T Consensus 5 kv~~vl~ELeRlkveiQRLE~ml 27 (67)
T 1wmi_B 5 KVGDVLKELERLKVEIQRLEAML 27 (67)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 34558999999999999997664
No 360
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=70.05 E-value=9 Score=31.63 Aligned_cols=22 Identities=18% Similarity=0.388 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 008196 549 ILENQAELMKEIKSLRKENHQL 570 (574)
Q Consensus 549 ~~~~~~~l~~E~~~lr~en~~l 570 (574)
+..+.+.|.+|++.|+++.+||
T Consensus 59 l~~e~~~L~~e~~~L~~~L~~l 80 (80)
T 1nlw_A 59 AVHQIDQLQREQRHLKRQLEKL 80 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHhhC
Confidence 3444678899999999888876
No 361
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=69.41 E-value=36 Score=28.95 Aligned_cols=74 Identities=12% Similarity=0.275 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHHH---HHHHHHHHHHHHHHHhHHHHHHHhhhHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 499 NFTLQLFQRTLEE---TLDSFQKSIHEDMRNLHIEILRQFHMQETQ-------MSNVMSSILENQAELMKEIKSLRKENH 568 (574)
Q Consensus 499 ~~~~~~~~~~~~e---~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e-------~~~~~~~~~~~~~~l~~E~~~lr~en~ 568 (574)
.+-.+||++++.+ .|..++..|-+==+.|+..--++ ++=-.+ +...+=.+-+++++|.+||++|+++-=
T Consensus 4 ~~P~~yF~~lv~~fe~rL~~Yr~~IeelE~~L~s~s~~~-~~Tpq~L~~~l~~~h~~FiaLAa~l~~lH~~V~~~Ke~Yl 82 (93)
T 3t98_B 4 MAPADYFRVLVQQFEVQLQQYRQQIEELENHLATQANNS-HITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQYL 82 (93)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHT-TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446788887765 67777777755333333321111 100112 333333456889999999999999999
Q ss_pred HHHhh
Q 008196 569 QLRQL 573 (574)
Q Consensus 569 ~lr~~ 573 (574)
.|||+
T Consensus 83 ~~rr~ 87 (93)
T 3t98_B 83 SYRKM 87 (93)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99986
No 362
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=69.39 E-value=51 Score=28.42 Aligned_cols=51 Identities=12% Similarity=0.258 Sum_probs=38.7
Q ss_pred HHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 518 KSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQ 569 (574)
Q Consensus 518 ~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~ 569 (574)
+.++++|..|| +|+.++.+.=.|+..+++.+..+++.-...++.=.+|.++
T Consensus 24 ~~Ie~~I~eL~-~iF~dla~lV~eQge~Id~Ie~nv~~a~~~v~~g~~eL~k 74 (109)
T 3hd7_B 24 IKLENSIRELH-DMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKK 74 (109)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677777777 6788888888889999999988888877777665555544
No 363
>1s94_A S-syntaxin; three helix bundle, structural plasticity, endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP: a.47.2.1
Probab=69.32 E-value=14 Score=34.21 Aligned_cols=60 Identities=13% Similarity=0.321 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHH---HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 509 LEETLDSFQKSIHEDMRNLHIEIL---RQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQ 569 (574)
Q Consensus 509 ~~e~l~~~~~~~~~d~~nlh~e~l---rqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~ 569 (574)
|++.|..++.-+. +|+.+|-.+| +.....+.+|..++.++......+...|+.|.++|.+
T Consensus 48 I~~~i~~i~~~v~-~l~~~~~~~L~~~~~~~~~k~~le~l~~~i~~~a~~ik~~Lk~l~~~~~~ 110 (180)
T 1s94_A 48 IRAMIDKISDNVD-AVKKKHSDILSAPQTDDQMKEELEELMTDIKRTANKVRGKLKTIELNIEQ 110 (180)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4556666666555 7888888866 3444566788888888888888888888888888764
No 364
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=68.84 E-value=43 Score=26.78 Aligned_cols=64 Identities=9% Similarity=0.178 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 508 TLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 571 (574)
Q Consensus 508 ~~~e~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr 571 (574)
=|+.+-+++-..-++|+..++-.=+.....+-..-...+.....++.+|+.-|++|+-|.+-||
T Consensus 13 eiRaQYE~ia~knr~EaE~~y~~k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 13 DVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3445556666666777776664332222222222333455556667888888889988888876
No 365
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=68.73 E-value=37 Score=36.91 Aligned_cols=96 Identities=9% Similarity=-0.008 Sum_probs=56.9
Q ss_pred ccCCCCEEEEEeCCC-------cEEEEECCC-Ccee-----EEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCC
Q 008196 2 YNCKDEHLASISLSG-------DLILHNLAS-GAKA-----AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT 68 (574)
Q Consensus 2 FSpDG~~LASGS~DG-------tVrIWDl~T-g~~l-----~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~ 68 (574)
|+++|++|+.+...+ .|.+.+... |... ..+.... .. ..++++|++..|+++--.++.|..+|+.
T Consensus 200 ~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p-~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 200 YADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK-QC-NGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp TBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES-CC-CCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred cCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCC-Cc-eEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 388898666666543 266665443 2221 1222111 12 3447899666878888888999999986
Q ss_pred -------CCCc-------------eeEEeccCCCCeEEEEEcCCCCEEEEEE
Q 008196 69 -------GRSP-------------KVSWLKQHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 69 -------~~~~-------------ll~tl~gH~~~VtSVaFSPDG~~LaS~s 100 (574)
+... .+... +.....+.|+|+|+|.+|+.+-
T Consensus 278 ~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 278 DYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp HHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEE
T ss_pred cccccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEe
Confidence 4322 11112 2233468999999999665553
No 366
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=68.07 E-value=16 Score=39.99 Aligned_cols=53 Identities=13% Similarity=0.228 Sum_probs=40.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-----------HHHHHhhhHHHHHHHHHHH
Q 008196 496 QGSNFTLQLFQRTLEETLDSFQKSIHEDMRNLHI-----------EILRQFHMQETQMSNVMSS 548 (574)
Q Consensus 496 ~~~~~~~~~~~~~~~e~l~~~~~~~~~d~~nlh~-----------e~lrqf~~~~~e~~~~~~~ 548 (574)
.+.+..++.+||.++.-+.|+...+|.+++.||- .+++++..|+.-|..-|+.
T Consensus 44 ~~~~~~~e~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 107 (526)
T 2de0_X 44 NGLGKDHEILRRRIENGAKELWFFLQSELKKLKNLEGNELQRHADEFLLDLGHHERSIMTDLYY 107 (526)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHhHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667789999999999999999999999998887 3666666666655555544
No 367
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=67.84 E-value=6.6 Score=30.59 Aligned_cols=29 Identities=21% Similarity=0.161 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 545 VMSSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 545 ~~~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
-++++..+.+.|.+||..|+.|.++||..
T Consensus 23 ~~~~Le~~~~~L~~~n~~L~~~i~~L~~e 51 (61)
T 1t2k_D 23 WVQSLEKKAEDLSSLNGQLQSEVTLLRNE 51 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566667788888888888888888763
No 368
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=67.52 E-value=4.2 Score=31.34 Aligned_cols=22 Identities=18% Similarity=0.208 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 008196 552 NQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 552 ~~~~l~~E~~~lr~en~~lr~~ 573 (574)
-+++|..+|+.|.+||++|+..
T Consensus 23 ~~~~LE~~v~~L~~eN~~L~~~ 44 (55)
T 1dh3_A 23 YVKSLENRVAVLENQNKTLIEE 44 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3567777777777777777754
No 369
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=67.43 E-value=19 Score=37.74 Aligned_cols=59 Identities=7% Similarity=0.038 Sum_probs=36.6
Q ss_pred EEEEEcc-CCCeEEEEEeCCCcEEEEeCCCCCceeEEe-ccCCCCeEEEEEcCCCCEEEEEE
Q 008196 41 RVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRSPKVSWL-KQHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 41 s~LafSP-dGr~LLaSgS~DGtVrLWDl~~~~~ll~tl-~gH~~~VtSVaFSPDG~~LaS~s 100 (574)
..++++| +| .++++-..++.|+.+|..+.......+ .+....-..|+|+|++.+|+.+.
T Consensus 231 ~giavd~~~G-~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 231 KTCAVHPQNG-KIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp CCCEECTTTC-CEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CEEEEeCCCC-eEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe
Confidence 3458899 55 766666677889999986433211111 11122345799999999776654
No 370
>1a93_A Coiled coil, LZ, MYC proto-oncogene protein; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Homo sapiens} SCOP: h.1.3.1 PDB: 2a93_A
Probab=67.01 E-value=4.4 Score=28.57 Aligned_cols=24 Identities=29% Similarity=0.410 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 550 LENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 550 ~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
.++-..|..|-+.||+.|+||++.
T Consensus 6 q~dE~kLl~ekE~l~~r~eqL~~k 29 (34)
T 1a93_A 6 QAEEQKLISEEDLLRKRREQLKHK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334456777777788888887765
No 371
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=66.51 E-value=4.2 Score=35.44 Aligned_cols=25 Identities=24% Similarity=0.335 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 548 SILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 548 ~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
.+...+.+|.+|++.||+|+++||.
T Consensus 11 ~l~~~~~~l~~~i~~lkeel~~L~~ 35 (109)
T 2wg5_A 11 QLEDKVEELLSKNYHLENEVARLRS 35 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3456678889999999999999986
No 372
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=66.27 E-value=34 Score=28.21 Aligned_cols=34 Identities=21% Similarity=0.276 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 539 ETQMSNVMSSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 539 ~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
++.+..+=+.+..++++|.-|.+.|+.|+.-+++
T Consensus 25 KNaLnvvk~DLI~rvdELt~E~e~l~~El~s~~~ 58 (77)
T 2w83_C 25 KNALNIVKNDLIAKVDELTCEKDVLQGELEAVKQ 58 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3444444455566666666666666666665554
No 373
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=66.26 E-value=18 Score=36.73 Aligned_cols=97 Identities=8% Similarity=0.053 Sum_probs=52.1
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEec-------CCCCCeEEEEEEccC---CCeEEEEEeC-------CCcEEE
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELK-------DPNEQVLRVLDYSRN---SRHLLVTAGD-------DGTLHL 64 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~-------gh~~~Vvs~LafSPd---Gr~LLaSgS~-------DGtVrL 64 (574)
|.+||++|+.+..+|.|++++. .+.....+. ...... ..|+|+|+ +..+.++-.. ...|..
T Consensus 25 ~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~-~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r 102 (353)
T 2g8s_A 25 FLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGL-LDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGY 102 (353)
T ss_dssp ECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSE-EEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEE
T ss_pred EcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCc-eeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEE
Confidence 7889983444557899999986 343211111 112234 67799995 4465555433 235666
Q ss_pred EeCCCCC-------ceeEEec-----cCCCCeEEEEEcCCCCEEEEEEecC
Q 008196 65 WDTTGRS-------PKVSWLK-----QHSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 65 WDl~~~~-------~ll~tl~-----gH~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
|++.... .++..+. .|. ...|+|.|||.++++ ..+.
T Consensus 103 ~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~Lyv~-~Gd~ 150 (353)
T 2g8s_A 103 GRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKGYLFIA-LGEN 150 (353)
T ss_dssp EEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSSEEEEE-ECCT
T ss_pred EEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCCcEEEE-ECCC
Confidence 6664321 0111111 132 367999999955544 4343
No 374
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=66.19 E-value=48 Score=28.03 Aligned_cols=40 Identities=15% Similarity=0.293 Sum_probs=32.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 535 FHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 535 f~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
|...-.+++..+++...+.+.|.-|+..|+.+.++||..|
T Consensus 54 ye~~i~~Lr~~i~~~~~ek~~l~~e~dnl~~~~~~~k~KL 93 (93)
T 3s4r_A 54 YEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKL 93 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 5555567777788888888888889999999999998765
No 375
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=65.96 E-value=5.4 Score=34.61 Aligned_cols=28 Identities=21% Similarity=0.191 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 545 VMSSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 545 ~~~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
-++.+..++++|..|+.+||+|++.|--
T Consensus 13 ~~~~lr~ei~~Le~E~~rLr~~~~~LE~ 40 (100)
T 1go4_E 13 EADTLRLKVEELEGERSRLEEEKRMLEA 40 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566778899999999999999998854
No 376
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=65.83 E-value=7 Score=27.29 Aligned_cols=26 Identities=23% Similarity=0.354 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 541 QMSNVMSSILENQAELMKEIKSLRKE 566 (574)
Q Consensus 541 e~~~~~~~~~~~~~~l~~E~~~lr~e 566 (574)
++..-++++..+..+|..||++||.=
T Consensus 4 QLE~kVEeLl~~n~~Le~EV~RLk~L 29 (33)
T 3m48_A 4 QLEAKVEELLSKNWNLENEVARLKKL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 34556777888899999999999863
No 377
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=65.80 E-value=1.4e+02 Score=32.89 Aligned_cols=100 Identities=8% Similarity=0.029 Sum_probs=59.8
Q ss_pred ccCCCCEEEEE-eCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccC
Q 008196 2 YNCKDEHLASI-SLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (574)
Q Consensus 2 FSpDG~~LASG-S~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH 80 (574)
|++.++.|+.. ...+.|+.+++........+...-..+ ..|++.+.++.|.++-...+.|.+.++.+..... .....
T Consensus 356 ~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p-~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~-l~~~~ 433 (619)
T 3s94_A 356 YDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHP-DGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKI-LISED 433 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC-CEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-EECTT
T ss_pred EEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCc-CceEEecccCcEEEEeCCCCcEEEEeCCCCeEEE-EEECC
Confidence 44434444433 356777778775433322332222334 5678887666878887778999999997753322 22223
Q ss_pred CCCeEEEEEcCCCCEEEEEEecC
Q 008196 81 SAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 81 ~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
-....+|++.|....|+-.-|..
T Consensus 434 l~~P~~iavdp~~G~ly~tD~g~ 456 (619)
T 3s94_A 434 LEEPRAIVLDPMVGYMYWTDWGE 456 (619)
T ss_dssp CCSEEEEEEETTTTEEEEEECSS
T ss_pred CCCeeeEEEEcCCCcEEEecCCC
Confidence 34578999999755665555543
No 378
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=65.60 E-value=9 Score=42.37 Aligned_cols=53 Identities=13% Similarity=0.132 Sum_probs=40.1
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEe
Q 008196 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG 57 (574)
Q Consensus 5 DG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS 57 (574)
.+.+++.++.|+.|+.||..+|+.++.++...+....-+.|..+|++|+++..
T Consensus 483 agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIYY 535 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEEc
Confidence 46678889999999999999999999998654433334467778876666554
No 379
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=65.30 E-value=10 Score=26.52 Aligned_cols=28 Identities=18% Similarity=0.098 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 540 TQMSNVMSSILENQAELMKEIKSLRKEN 567 (574)
Q Consensus 540 ~e~~~~~~~~~~~~~~l~~E~~~lr~en 567 (574)
+++..-+++++.+..+|..||++||+=.
T Consensus 4 nQLEdKVEeLl~~~~~Le~EV~RLk~ll 31 (34)
T 3c3f_A 4 XQIEXKLEXILSXLYHXENEXARIXKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 3456677888899999999999999743
No 380
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=65.23 E-value=45 Score=32.96 Aligned_cols=94 Identities=10% Similarity=0.050 Sum_probs=49.1
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEec---
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK--- 78 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~--- 78 (574)
|.+++.+++.+...+..+-+|- .|.....+.......+..+.+.+++ .++ .++.+|.|++++..... ....+.
T Consensus 170 ~~~~~~~~~~g~~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g-~~~-~~~~~G~~~~s~~D~G~-tW~~~~~~~ 245 (327)
T 2xbg_A 170 RSPSGEYVAVSSRGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDG-RLW-MIVNGGKIAFSDPDNSE-NWGELLSPL 245 (327)
T ss_dssp ECTTSCEEEEETTSSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTS-CEE-EEETTTEEEEEETTEEE-EECCCBCTT
T ss_pred EcCCCcEEEEECCCcEEEEeCC-CCCceeECCCCCCCccceeEECCCC-CEE-EEeCCceEEEecCCCCC-eeEeccCCc
Confidence 4567777776644333333342 1333223322222333666888887 533 45568888887432110 000111
Q ss_pred -cCCCCeEEEEEcCCCCEEEEE
Q 008196 79 -QHSAPTAGISFSSDDKAVSSL 99 (574)
Q Consensus 79 -gH~~~VtSVaFSPDG~~LaS~ 99 (574)
.+...+.+|.|.+++..++.+
T Consensus 246 ~~~~~~~~~v~~~~~~~~~~~g 267 (327)
T 2xbg_A 246 RRNSVGFLDLAYRTPNEVWLAG 267 (327)
T ss_dssp SSCCSCEEEEEESSSSCEEEEE
T ss_pred ccCCcceEEEEecCCCEEEEEe
Confidence 123458899999887776654
No 381
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=65.16 E-value=70 Score=30.08 Aligned_cols=65 Identities=14% Similarity=0.196 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHH------HHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 500 FTLQLFQRTLEE------TLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRK 565 (574)
Q Consensus 500 ~~~~~~~~~~~e------~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~ 565 (574)
++++-+...++| .|..-+.++.+|+.+|+..+- |=+--+..+..+..++.+++..|..|++++|.
T Consensus 41 k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~-qEr~~r~q~se~~~elq~ri~~L~~El~~~k~ 111 (168)
T 3o0z_A 41 KSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILE-AERRDRGHDSEMIGDLQARITSLQEEVKHLKH 111 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444 556667788889999987653 33333344455555666677888888888776
No 382
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=64.86 E-value=9.9 Score=28.75 Aligned_cols=30 Identities=17% Similarity=0.161 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 545 VMSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 545 ~~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
+-+.+..++.+|..-...+.+||+||+++|
T Consensus 12 ~n~~L~~kv~~Le~~c~~~eQEieRL~~LL 41 (48)
T 3vmx_A 12 INIQLATKIQHLEFSCSEKEQEIERLNKLL 41 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 334445555556555555667777777764
No 383
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=64.73 E-value=13 Score=39.39 Aligned_cols=41 Identities=12% Similarity=0.093 Sum_probs=31.8
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 531 ILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 571 (574)
Q Consensus 531 ~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr 571 (574)
|..+...-++.|...|+.+.++.+.|.+|+++|++|++++=
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (487)
T 3oja_A 422 MYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEAD 462 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhh
Confidence 55555556666778888888888888889999988888763
No 384
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=64.61 E-value=11 Score=26.46 Aligned_cols=27 Identities=15% Similarity=0.305 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 540 TQMSNVMSSILENQAELMKEIKSLRKE 566 (574)
Q Consensus 540 ~e~~~~~~~~~~~~~~l~~E~~~lr~e 566 (574)
+++..-++++..+..+|..||++||+=
T Consensus 4 nQLEdkVEeLl~~~~~Le~eV~RL~~l 30 (34)
T 2hy6_A 4 KQLADAVEELASANYHLANAVARLAKA 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 456777888999999999999999973
No 385
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=63.99 E-value=24 Score=37.63 Aligned_cols=25 Identities=16% Similarity=0.120 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHH
Q 008196 506 QRTLEETLDSFQKSIHEDMRNLHIEI 531 (574)
Q Consensus 506 ~~~~~e~l~~~~~~~~~d~~nlh~e~ 531 (574)
|+-|+..|.++ +.+-+||.|++-++
T Consensus 33 e~~V~~~l~~L-E~~l~elsn~ts~v 57 (409)
T 1m1j_C 33 RLTTDGELLEI-EGLLQQATNSTGSI 57 (409)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred HhcchhHHHHH-HHHHHHHHHHHHHH
Confidence 34444444444 33334444444433
No 386
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=63.80 E-value=10 Score=41.27 Aligned_cols=55 Identities=16% Similarity=0.131 Sum_probs=39.2
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCC
Q 008196 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD 59 (574)
Q Consensus 5 DG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~D 59 (574)
.+.+++.++.|+.|++||..+|+.++.+..........+.|..+|+.++++.+..
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~~G~ 528 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSMYGV 528 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECC
T ss_pred CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEEECCC
Confidence 3567788999999999999999999998855433223335667886666555443
No 387
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=63.80 E-value=8.7 Score=30.01 Aligned_cols=29 Identities=17% Similarity=0.201 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 545 VMSSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 545 ~~~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
-++++..++++|..||..|+.|.++|+..
T Consensus 23 ~~~~Le~~v~~L~~~n~~L~~~v~~L~~e 51 (62)
T 1jnm_A 23 RIARLEEKVKTLKAQNSELASTANMLREQ 51 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566677888999999999999988864
No 388
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=63.57 E-value=12 Score=26.34 Aligned_cols=26 Identities=19% Similarity=0.280 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 541 QMSNVMSSILENQAELMKEIKSLRKE 566 (574)
Q Consensus 541 e~~~~~~~~~~~~~~l~~E~~~lr~e 566 (574)
++..-+++++.+..+|..||.+||+=
T Consensus 5 QLEdKVEeLl~~n~~Le~EV~RLk~L 30 (34)
T 1uo4_A 5 QIEDKGEEILSKLYHIENELARIKKL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45667788889999999999999973
No 389
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=63.54 E-value=77 Score=27.78 Aligned_cols=56 Identities=18% Similarity=0.236 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Q 008196 508 TLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVM---SSILENQAELMKEIKSLR 564 (574)
Q Consensus 508 ~~~e~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~---~~~~~~~~~l~~E~~~lr 564 (574)
-+++.+++|+...-.|+ +++-++=-.|..++..+-.+. -.+..++..|.+|+.-||
T Consensus 45 n~~~~~edfk~KyE~E~-~~r~~~E~di~~lrK~lD~~~l~r~dLE~~iesL~eEl~FLK 103 (119)
T 3ol1_A 45 NLAEDIMRLREKLQEEM-LQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLK 103 (119)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHH-HHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566665554443 344444445555444433222 123344455555555554
No 390
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=63.45 E-value=12 Score=26.10 Aligned_cols=28 Identities=4% Similarity=0.089 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 540 TQMSNVMSSILENQAELMKEIKSLRKEN 567 (574)
Q Consensus 540 ~e~~~~~~~~~~~~~~l~~E~~~lr~en 567 (574)
+++..-++++..+..+|..||++||.=.
T Consensus 3 nQLEdKvEeLl~~~~~Le~EV~RLk~lL 30 (33)
T 3c3g_A 3 KXIEXKLXEIXSKXYHXENXLARIKXLL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3456677888899999999999999743
No 391
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=63.13 E-value=14 Score=41.30 Aligned_cols=99 Identities=11% Similarity=0.059 Sum_probs=53.6
Q ss_pred ccCCCCEEEEEe-CCCcEEEEECCC----CceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEE
Q 008196 2 YNCKDEHLASIS-LSGDLILHNLAS----GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (574)
Q Consensus 2 FSpDG~~LASGS-~DGtVrIWDl~T----g~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~t 76 (574)
|++.+..|+... ..+.|+.+++.. ......+......+ ..|++.+.+..|+++-...+.|.++++.+..... .
T Consensus 413 ~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P-~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~-l 490 (699)
T 1n7d_A 413 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP-DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT-L 490 (699)
T ss_dssp EETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--C-CCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEE-E
T ss_pred cccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCc-ceEEEEeeCCcEEEEeccCCeEEEEecCCCceEE-E
Confidence 445455554443 467788888754 12111111111122 3457776555766666667889999987643221 2
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEEec
Q 008196 77 LKQHSAPTAGISFSSDDKAVSSLCWQ 102 (574)
Q Consensus 77 l~gH~~~VtSVaFSPDG~~LaS~sWD 102 (574)
+.........|++.|.+.+|+..-|.
T Consensus 491 ~~~~~~~P~giavDp~~g~ly~td~~ 516 (699)
T 1n7d_A 491 FREQGSKPRAIVVDPVHGFMYWTDWG 516 (699)
T ss_dssp CCCSSCCCCCEECCSSSSCCEECCCS
T ss_pred EeCCCCCcceEEEccCCCcEEEcccC
Confidence 22222345778888876666554443
No 392
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=62.81 E-value=12 Score=34.88 Aligned_cols=26 Identities=15% Similarity=0.307 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHhh
Q 008196 548 SILENQAELMKEI-KSLRKENHQLRQL 573 (574)
Q Consensus 548 ~~~~~~~~l~~E~-~~lr~en~~lr~~ 573 (574)
+|..+++-+.+|+ +++++.-+.||+.
T Consensus 132 elR~kl~P~~eeL~~~~~~~~eeLr~k 158 (165)
T 1gs9_A 132 ELRVRLASHLRKLRKRLLRDADDLQKR 158 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 5555555555555 4555566666654
No 393
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=62.42 E-value=14 Score=30.35 Aligned_cols=21 Identities=14% Similarity=0.229 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 008196 550 LENQAELMKEIKSLRKENHQL 570 (574)
Q Consensus 550 ~~~~~~l~~E~~~lr~en~~l 570 (574)
..++++|.+|+++|+.+.++|
T Consensus 60 ~~e~~~L~~~~~~L~~~l~~L 80 (83)
T 1nkp_B 60 QQDIDDLKRQNALLEQQVRAL 80 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 455778888888888887765
No 394
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=61.91 E-value=8.4 Score=31.80 Aligned_cols=29 Identities=24% Similarity=0.322 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 544 NVMSSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 544 ~~~~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
++|..-.+=+.+|.++++.|++||++||+
T Consensus 43 ~IL~~Ai~YI~~Lq~~~~~L~~e~~~L~~ 71 (82)
T 1am9_A 43 AVLRKAIDYIRFLQHSNQKLKQENLSLRT 71 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334445666666666666666664
No 395
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=61.87 E-value=5.3 Score=25.96 Aligned_cols=20 Identities=35% Similarity=0.577 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 008196 553 QAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 553 ~~~l~~E~~~lr~en~~lr~ 572 (574)
-+||-+|++.|.+....||.
T Consensus 3 adelykeledlqerlrklrk 22 (27)
T 3twe_A 3 ADELYKELEDLQERLRKLRK 22 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 35566666666555555554
No 396
>2nps_B Syntaxin 13, vesicle-associated membrane protein 4; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Rattus norvegicus}
Probab=61.84 E-value=51 Score=26.14 Aligned_cols=52 Identities=12% Similarity=0.252 Sum_probs=41.0
Q ss_pred HHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 518 KSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQL 570 (574)
Q Consensus 518 ~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~l 570 (574)
+.|..+|.-|| +|++++..+=.|+..+++.|..++..-..-++.=.+|..+-
T Consensus 9 ~~ie~~i~eL~-~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~eL~kA 60 (71)
T 2nps_B 9 QQLEADILDVN-QIFKDLAMMIHDQGDLIDSIEANVESSEVHVERASDQLQRA 60 (71)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666776 67888888888999999999999988888887776666543
No 397
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=61.37 E-value=13 Score=41.62 Aligned_cols=92 Identities=9% Similarity=-0.023 Sum_probs=52.5
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEecC-CCCCeEEEEEEccCCCeEEEEEeC-CCcEEEEeCCCCCceeEEeccCCCC
Q 008196 6 DEHLASISLSGDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGD-DGTLHLWDTTGRSPKVSWLKQHSAP 83 (574)
Q Consensus 6 G~~LASGS~DGtVrIWDl~Tg~~l~t~~g-h~~~Vvs~LafSPdGr~LLaSgS~-DGtVrLWDl~~~~~ll~tl~gH~~~ 83 (574)
++++++-...+.|.++++.... +..+.. ..... ..|++.|.+.+|+++-.. .+.|..+++.+....+ .....-..
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~-~~~l~~~~~~~P-~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~-l~~~~l~~ 541 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVK-RKTLFREQGSKP-RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS-LVTENIQW 541 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCC-EEEECCCSSCCC-CCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE-ESCSSCSS
T ss_pred CcEEEEeccCCeEEEEecCCCc-eEEEEeCCCCCc-ceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE-EEeCCCCC
Confidence 3444444567788899885443 333332 22233 556889876565555433 3788888876533222 12222234
Q ss_pred eEEEEEcCCCCEEEEEE
Q 008196 84 TAGISFSSDDKAVSSLC 100 (574)
Q Consensus 84 VtSVaFSPDG~~LaS~s 100 (574)
...|+|++++..|+.+-
T Consensus 542 PnGlavd~~~~~LY~aD 558 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVD 558 (699)
T ss_dssp CCCEEECTTTCCEEEEE
T ss_pred ccEEEEeccCCEEEEEe
Confidence 57899998877776554
No 398
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=60.98 E-value=21 Score=29.22 Aligned_cols=30 Identities=13% Similarity=0.209 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 545 VMSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 545 ~~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
.++++...+++..+||+.||.|...+|..|
T Consensus 41 ~I~eLEk~L~ekd~eI~~LqseLDKfrSVl 70 (72)
T 3nmd_A 41 LIDELELELDQKDELIQMLQNELDKYRSVI 70 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 356666677888999999999999888654
No 399
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=60.70 E-value=91 Score=27.68 Aligned_cols=27 Identities=15% Similarity=0.259 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 546 MSSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 546 ~~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
+.++.+++..|..+++-.-.|.+|||+
T Consensus 73 vqeLqgEI~~Lnq~Lq~a~ae~erlr~ 99 (121)
T 3mq7_A 73 VEELEGEITTLNHKLQDASAEVERLRR 99 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444444444444444556677775
No 400
>1cxz_B Protein (PKN); protein-protein complex, antiparallel coiled-coil, signaling protein; HET: GSP; 2.20A {Homo sapiens} SCOP: a.2.6.1
Probab=60.16 E-value=70 Score=26.92 Aligned_cols=22 Identities=18% Similarity=0.385 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 008196 504 LFQRTLEETLDSFQKSIHEDMR 525 (574)
Q Consensus 504 ~~~~~~~e~l~~~~~~~~~d~~ 525 (574)
++|.=+++.-..+|++|..||+
T Consensus 18 ~~q~~le~~r~~ir~eI~KElK 39 (86)
T 1cxz_B 18 GVQQQLELERERLRREIRKELK 39 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4455678888888888888876
No 401
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=60.13 E-value=11 Score=29.58 Aligned_cols=28 Identities=18% Similarity=0.203 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 546 MSSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 546 ~~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
++++..+.+.|.+||..|++|.++|+..
T Consensus 25 ~~~Le~~v~~L~~~n~~L~~ei~~L~~e 52 (63)
T 2wt7_A 25 TDTLQAETDQLEDEKSALQTEIANLLKE 52 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666778888888888888877753
No 402
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=60.05 E-value=66 Score=32.20 Aligned_cols=36 Identities=14% Similarity=0.205 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhH
Q 008196 503 QLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQ 538 (574)
Q Consensus 503 ~~~~~~~~e~l~~~~~~~~~d~~nlh~e~lrqf~~~ 538 (574)
+-++.-|+--..+++..++++|..|+-.|---.+.+
T Consensus 47 e~lr~~L~Py~~el~~~~~~~~eelr~kL~p~~~el 82 (273)
T 3s84_A 47 RELQQRLEPYADQLRTQVNTQAEQLRRQLTPYAQRM 82 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 333444444444444455555555544443333333
No 403
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=59.68 E-value=15 Score=25.79 Aligned_cols=27 Identities=19% Similarity=0.386 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 540 TQMSNVMSSILENQAELMKEIKSLRKE 566 (574)
Q Consensus 540 ~e~~~~~~~~~~~~~~l~~E~~~lr~e 566 (574)
+++..-+++++.+..+|..||++||+=
T Consensus 4 nQLEdKvEeLl~~~~~L~~EV~RLk~l 30 (34)
T 2bni_A 4 KQIEDKLEEILSKGHHICNELARIKKL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 345667888899999999999999974
No 404
>3vhl_A Dedicator of cytokinesis protein 8; signal transduction, guanine nucleotide exchang factor, GTPA signaling protein; 2.08A {Mus musculus}
Probab=59.63 E-value=9.2 Score=38.79 Aligned_cols=40 Identities=10% Similarity=0.278 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHH
Q 008196 508 TLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMS 547 (574)
Q Consensus 508 ~~~e~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~ 547 (574)
+++++|.=..+-|..|++.+|-+|.++|+.++.+|..+|+
T Consensus 245 ~l~~~L~lh~~li~~~~~~~h~~L~~~F~~l~~~l~~l~~ 284 (288)
T 3vhl_A 245 RCGEAVEKNRRLITAEQREYQQELKKNYNKLRDSLRPMIE 284 (288)
T ss_dssp HHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555666666777789999999999999999888888875
No 405
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=59.49 E-value=9.6 Score=29.48 Aligned_cols=21 Identities=14% Similarity=0.240 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 008196 553 QAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 553 ~~~l~~E~~~lr~en~~lr~~ 573 (574)
++++.+++++|.+||++|+..
T Consensus 29 Ld~v~~~~~~l~~e~~~L~~~ 49 (57)
T 2wuj_A 29 LAQVRKDYEIVLRKKTELEAK 49 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 367777778888888877764
No 406
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=58.44 E-value=16 Score=25.39 Aligned_cols=26 Identities=15% Similarity=0.087 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 540 TQMSNVMSSILENQAELMKEIKSLRK 565 (574)
Q Consensus 540 ~e~~~~~~~~~~~~~~l~~E~~~lr~ 565 (574)
+++..-++++..+..+|..||++||+
T Consensus 3 nQLEdKVEell~~~~~le~EV~Rl~~ 28 (33)
T 2wq1_A 3 KQLEDKIEENTSKIYHNTNEIARNTK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34566678888889999999999986
No 407
>2j4b_A TAF5, transcription initiation factor TFIID subunit 72/ kDa; WD repeat; 2.5A {Encephalitozoon cuniculi} SCOP: d.379.1.1
Probab=58.22 E-value=7 Score=35.38 Aligned_cols=63 Identities=13% Similarity=0.240 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 500 FTLQLFQRTLEETLDSFQKSIHEDM----RNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLR 564 (574)
Q Consensus 500 ~~~~~~~~~~~e~l~~~~~~~~~d~----~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr 564 (574)
-++..|++.|++++|-++.|+++=+ .-++|||++.+|. .|-+..++.+.....+..++|+.|+
T Consensus 10 ~~y~~L~~wv~~sld~yk~EL~~lLyPlFvh~yL~Lv~~g~~--~~A~~F~~~f~~~~~~~~~~i~~L~ 76 (138)
T 2j4b_A 10 TSYVSLKTWIEDSLDLFKNDLLPLLYPLFIHIYFDLIQQNKT--DEAKEFFEKYRGDHYNKSEEIKQFE 76 (138)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHGGGHHHHHHHHHHHHHHTTCH--HHHHHHHHHHGGGC--CHHHHHHHT
T ss_pred HHHHHHHHHHHhCcHhhHHHHHHHHHHHHHHHHHHHHHCCCh--HHHHHHHHHHhHHHhhHHHHHHHHh
Confidence 3578999999999999988776543 4679999999988 6677889998887776677888876
No 408
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=57.27 E-value=7.9 Score=29.70 Aligned_cols=21 Identities=19% Similarity=0.267 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 008196 548 SILENQAELMKEIKSLRKENH 568 (574)
Q Consensus 548 ~~~~~~~~l~~E~~~lr~en~ 568 (574)
++..++++|++|++.|+++.+
T Consensus 30 eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 30 EMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 344455555555555555443
No 409
>1gl2_B Syntaxin 7; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Mus musculus} SCOP: h.1.15.1
Probab=57.01 E-value=60 Score=25.30 Aligned_cols=50 Identities=16% Similarity=0.314 Sum_probs=39.9
Q ss_pred HHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 518 KSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENH 568 (574)
Q Consensus 518 ~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~ 568 (574)
+.|.++|.-|| +|++++..+=.|+..+++.|..++..-..-++.=.+|..
T Consensus 12 ~~ie~~i~eL~-~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~eL~ 61 (65)
T 1gl2_B 12 RQLEADIMDIN-EIFKDLGMMIHEQGDVIDSIEANVESAEVHVQQANQQLS 61 (65)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667777777 678888888889999999999998888888777666554
No 410
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=56.89 E-value=58 Score=28.91 Aligned_cols=35 Identities=17% Similarity=0.211 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHhh
Q 008196 539 ETQMSNVMSSILENQAELMKEIKS-------LRKENHQLRQL 573 (574)
Q Consensus 539 ~~e~~~~~~~~~~~~~~l~~E~~~-------lr~en~~lr~~ 573 (574)
+.|-+..+..+.+.+.+|..|++. .+-||++||..
T Consensus 35 ~~E~q~~v~ql~~~i~~Le~eL~e~r~~~q~a~~e~e~Lr~e 76 (120)
T 3i00_A 35 KTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAE 76 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444444444433 44457777753
No 411
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=56.88 E-value=26 Score=38.97 Aligned_cols=49 Identities=14% Similarity=0.233 Sum_probs=25.3
Q ss_pred HHHHHHHhHHHHHHHhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q 008196 520 IHEDMRNLHIEILRQFHMQETQMSNVM-SSILENQAELMKEIKSLRKENH 568 (574)
Q Consensus 520 ~~~d~~nlh~e~lrqf~~~~~e~~~~~-~~~~~~~~~l~~E~~~lr~en~ 568 (574)
+.+|.+++--|.=|+-.---.|+..+| +.|.++.+.|.+||+.|++++.
T Consensus 535 me~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ei~~l~~~~~ 584 (592)
T 1f5n_A 535 MENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKMR 584 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 333444443333333333333444444 4566667777777777777653
No 412
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=56.58 E-value=19 Score=41.99 Aligned_cols=30 Identities=17% Similarity=0.191 Sum_probs=26.4
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEec
Q 008196 4 CKDEHLASISLSGDLILHNLASGAKAAELK 33 (574)
Q Consensus 4 pDG~~LASGS~DGtVrIWDl~Tg~~l~t~~ 33 (574)
.+..++++-|.|+++|||++.+++++.+..
T Consensus 245 ~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 245 STYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred CCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 456799999999999999999999988765
No 413
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=56.44 E-value=20 Score=30.06 Aligned_cols=10 Identities=10% Similarity=0.238 Sum_probs=3.9
Q ss_pred HHHHHHHHHH
Q 008196 517 QKSIHEDMRN 526 (574)
Q Consensus 517 ~~~~~~d~~n 526 (574)
++..++.+.+
T Consensus 35 rqkekEqL~~ 44 (84)
T 1gmj_A 35 RARAKEQLAA 44 (84)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333344433
No 414
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=56.27 E-value=7 Score=39.10 Aligned_cols=33 Identities=24% Similarity=0.388 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 541 QMSNVMSSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 541 e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
|+..-++.+..+++.|.+++++||+|+++||..
T Consensus 58 eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeE 90 (251)
T 3m9b_A 58 QLEARIDSLAARNSKLMETLKEARQQLLALREE 90 (251)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555566666666666666666653
No 415
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=56.24 E-value=25 Score=24.97 Aligned_cols=30 Identities=17% Similarity=0.285 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 540 TQMSNVMSSILENQAELMKEIKSLRKENHQ 569 (574)
Q Consensus 540 ~e~~~~~~~~~~~~~~l~~E~~~lr~en~~ 569 (574)
+++..-++++..+..+|..||++||+-+-+
T Consensus 4 nQLE~KVEeLl~~~~~Le~eV~RLk~ll~~ 33 (36)
T 1kd8_B 4 KQLKAKVEELKSKLWHLKNKVARLKKKNAE 33 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 345667788889999999999999986643
No 416
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=56.15 E-value=12 Score=27.05 Aligned_cols=29 Identities=14% Similarity=0.195 Sum_probs=18.6
Q ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Q 008196 540 TQMSNV---MSSILENQAELMKEIKSLRKENH 568 (574)
Q Consensus 540 ~e~~~~---~~~~~~~~~~l~~E~~~lr~en~ 568 (574)
.+|..+ +.+|.+++..|..+|+.|..+..
T Consensus 6 e~mq~LNdrlAsyidkVR~LE~~N~~Le~~i~ 37 (39)
T 1gk7_A 6 VELQELNDRFANYIDKVRFLEQQNKILLAELE 37 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445544 45677777777777777766554
No 417
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=56.12 E-value=33 Score=31.11 Aligned_cols=20 Identities=30% Similarity=0.401 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 008196 552 NQAELMKEIKSLRKENHQLR 571 (574)
Q Consensus 552 ~~~~l~~E~~~lr~en~~lr 571 (574)
+.+++.+|++.|++||+.|.
T Consensus 104 k~e~~~~e~~~l~~~~~~l~ 123 (138)
T 3hnw_A 104 KAESSAKEIKELKSEINKYQ 123 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444443
No 418
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=56.11 E-value=76 Score=34.39 Aligned_cols=100 Identities=9% Similarity=0.169 Sum_probs=54.7
Q ss_pred ccCC--CCEEEEEeCCCcEEEEECCCCceeEEecCCC---CCeEEEEEE-------ccCCCeEEEEEeCCCc------EE
Q 008196 2 YNCK--DEHLASISLSGDLILHNLASGAKAAELKDPN---EQVLRVLDY-------SRNSRHLLVTAGDDGT------LH 63 (574)
Q Consensus 2 FSpD--G~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~---~~Vvs~Laf-------SPdGr~LLaSgS~DGt------Vr 63 (574)
|+|+ ++++++....+.|++.|+..+.....+.... ... ..|+| +++|+.|+++...++. |.
T Consensus 146 ~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p-~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~ 224 (496)
T 3kya_A 146 FDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRI-RSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVY 224 (496)
T ss_dssp EETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBE-EEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEE
T ss_pred EccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCC-cEEEEeecccccCCCCCEEEEEeCCCCCcccCceEE
Confidence 4552 3444444445778999997665544333222 224 77799 9999766666554422 66
Q ss_pred EEeCCC--CCc--e-eEEeccCCCCeEEEEEcCCCCEEEEEEecC
Q 008196 64 LWDTTG--RSP--K-VSWLKQHSAPTAGISFSSDDKAVSSLCWQR 103 (574)
Q Consensus 64 LWDl~~--~~~--l-l~tl~gH~~~VtSVaFSPDG~~LaS~sWD~ 103 (574)
+++... ... . ...+.... ...+++++|++..|+.+.+..
T Consensus 225 ~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~ 268 (496)
T 3kya_A 225 IIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEK 268 (496)
T ss_dssp EEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTT
T ss_pred EEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCC
Confidence 665432 211 0 01222222 235778899766676665543
No 419
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=55.89 E-value=71 Score=29.57 Aligned_cols=55 Identities=20% Similarity=0.180 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 514 DSFQKSIHEDMRNLHIEILRQF---HMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 514 ~~~~~~~~~d~~nlh~e~lrqf---~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
..-.....+.|+.|..||--.. ..++.|+.+ +.-.+..+.+.++.|++||+.|=+
T Consensus 74 ~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~a----Lqlq~n~lE~kl~kLq~EN~~LV~ 131 (152)
T 3a7p_A 74 QKELKSKEQEIRRLKEVIALKNKNTERLNAALIS----GTIENNVLQQKLSDLKKEHSQLVA 131 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334555667777776665443 344444443 344466777888888888888744
No 420
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=55.89 E-value=16 Score=31.31 Aligned_cols=58 Identities=19% Similarity=0.255 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 501 TLQLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKE 566 (574)
Q Consensus 501 ~~~~~~~~~~e~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~e 566 (574)
.+.=+++-|+|+ +++-+.|--|++|+- -.++..|..=+..|..+++.|.+|++.||..
T Consensus 39 ~i~~ie~~l~EA-~ell~qMelE~r~~p-------~~~R~~~~~klr~Yk~dL~~lk~elk~~~~~ 96 (102)
T 1vcs_A 39 MVANVEKQLEEA-RELLEQMDLEVREIP-------PQSRGMYSNRMRSYKQEMGKLETDFKRSRIA 96 (102)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHTTSC-------TTTHHHHHHHHHHHHHHHHHHHHHTHHHHTC
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHhCC-------HHhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 466677777776 556666777888773 2345556666666666666666665555543
No 421
>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}
Probab=55.84 E-value=11 Score=29.17 Aligned_cols=13 Identities=31% Similarity=0.675 Sum_probs=4.8
Q ss_pred HHHHHHHHHHHHH
Q 008196 557 MKEIKSLRKENHQ 569 (574)
Q Consensus 557 ~~E~~~lr~en~~ 569 (574)
.+|++.|++||.+
T Consensus 16 kDqV~eL~qe~k~ 28 (56)
T 2w6b_A 16 KDEVQELRQDNKK 28 (56)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 422
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=55.45 E-value=15 Score=28.94 Aligned_cols=23 Identities=22% Similarity=0.277 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 008196 550 LENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 550 ~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
..+..+|.+||..|+.+.++|+.
T Consensus 29 e~~~~~L~~~N~~L~~~i~~L~~ 51 (63)
T 1ci6_A 29 TGECKELEKKNEALKERADSLAK 51 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666666666666654
No 423
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=55.25 E-value=30 Score=41.19 Aligned_cols=18 Identities=22% Similarity=0.383 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 008196 555 ELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 555 ~l~~E~~~lr~en~~lr~ 572 (574)
+|.+.+..|++||+.||+
T Consensus 1020 ~L~~kv~~L~~e~~~L~q 1037 (1080)
T 2dfs_A 1020 ETEQLVSELKEQNTLLKT 1037 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334444445555555554
No 424
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=55.17 E-value=57 Score=32.64 Aligned_cols=18 Identities=17% Similarity=0.409 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHhHH
Q 008196 512 TLDSFQKSIHEDMRNLHI 529 (574)
Q Consensus 512 ~l~~~~~~~~~d~~nlh~ 529 (574)
.+++++..+.+||..|.-
T Consensus 34 ~~~~l~~~l~~~le~lr~ 51 (273)
T 3s84_A 34 HANEVSQKIGDNLRELQQ 51 (273)
T ss_dssp GHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 445555555555554443
No 425
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=53.80 E-value=43 Score=39.88 Aligned_cols=40 Identities=15% Similarity=0.089 Sum_probs=27.1
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 532 LRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 571 (574)
Q Consensus 532 lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr 571 (574)
.+....+|.+...+.+++.+++..|.+|++.||++..+|-
T Consensus 1004 ~ke~~~lee~~~~~~~~L~~kv~~L~~e~~~L~qq~~~l~ 1043 (1080)
T 2dfs_A 1004 QTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELN 1043 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555556666666777777777777777777766665
No 426
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=53.73 E-value=12 Score=30.20 Aligned_cols=24 Identities=25% Similarity=0.447 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 551 ENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 551 ~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
-.+++-.+||+.||++..++|.+|
T Consensus 32 ~~L~~kd~eI~eLr~~LdK~qsVl 55 (67)
T 1zxa_A 32 KRLSEKEEEIQELKRKLHKCQSVL 55 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345666778888888888887654
No 427
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=53.50 E-value=63 Score=29.25 Aligned_cols=47 Identities=13% Similarity=0.228 Sum_probs=20.9
Q ss_pred HHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 520 IHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKEN 567 (574)
Q Consensus 520 ~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en 567 (574)
...|+..|+-|++. ..+.-.++..-++++.+++.+|.+++..|..|+
T Consensus 87 ~~kE~~~lK~el~~-~~~k~e~~~~e~~~l~~~~~~l~~~~~~le~~~ 133 (138)
T 3hnw_A 87 KDKEIYDLKHELIA-AQIKAESSAKEIKELKSEINKYQKNIVKLETEL 133 (138)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556555543 233333333334444444444444444444443
No 428
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=53.45 E-value=1.9e+02 Score=30.35 Aligned_cols=93 Identities=15% Similarity=0.156 Sum_probs=61.1
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
.+|..+.||--. ...+.|+|+++...+..+.-. ..++.= .|-.+. . |+-. .+..|+.|++.+.......+.-|.
T Consensus 74 MnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfW-kWis~~-~-L~lV-T~taVyHWs~~~~s~P~kvFdR~~ 147 (365)
T 2xzh_A 74 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFW-KWISLN-T-VALV-TDNAVYHWSMEGESQPVKMFDRHS 147 (365)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEE-EECSSS-E-EEEE-ESSEEEEEESSTTCCCEEEEECCG
T ss_pred eCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEE-EecCCC-e-EEEE-cCCcEEEEcccCCCCCceeeecch
Confidence 367778777765 678999999999888887754 455333 675553 3 3322 367899999976444444444443
Q ss_pred ----CCeEEEEEcCCCCEEEEEE
Q 008196 82 ----APTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 82 ----~~VtSVaFSPDG~~LaS~s 100 (574)
..|-.-.-+++.++++..+
T Consensus 148 ~L~~~QIInY~~d~~~kW~~l~G 170 (365)
T 2xzh_A 148 SLAGCQIINYRTDAKQKWLLLTG 170 (365)
T ss_dssp GGTTCEEEEEEECTTSCEEEEEE
T ss_pred hcccceEEEEEECCCCCEEEEEe
Confidence 2355555678888887743
No 429
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=53.19 E-value=21 Score=35.41 Aligned_cols=93 Identities=9% Similarity=0.003 Sum_probs=52.5
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCce------eEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCC-Ccee
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAK------AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR-SPKV 74 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~------l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~-~~ll 74 (574)
|+|||.+.+. .+|.+.-.+..++.. -..+....-....++-|.++| .|.++ .||.|.-|+-... ....
T Consensus 48 f~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G-~LYav--~dG~iyr~~pP~~~~~~W 122 (236)
T 1tl2_A 48 LSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNG-YLYAV--SKDKLYKASPPQSDTDNW 122 (236)
T ss_dssp ECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCH
T ss_pred ECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCC-CEEEe--CCCEEEEeCCCcCCCCce
Confidence 7898887766 677666666544211 122221111113667899998 54554 6699988876221 1110
Q ss_pred ----EEecc-CCCCeEEEEEcCCCCEEEEE
Q 008196 75 ----SWLKQ-HSAPTAGISFSSDDKAVSSL 99 (574)
Q Consensus 75 ----~tl~g-H~~~VtSVaFSPDG~~LaS~ 99 (574)
..+.. --..+..|.|.|+|.+.+..
T Consensus 123 l~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 123 IARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp HHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred eccccEeccCCCCceEEEEECCCceEEEEe
Confidence 01111 11347999999999877655
No 430
>3b5n_B Protein SSO1; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae} SCOP: h.1.15.1
Probab=52.95 E-value=82 Score=24.78 Aligned_cols=53 Identities=8% Similarity=0.107 Sum_probs=41.1
Q ss_pred HHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 518 KSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 571 (574)
Q Consensus 518 ~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr 571 (574)
+.|.++|.-|| +|++++..+=.|+..+++.|..++..-..-++.=.+|..+-+
T Consensus 13 ~~ie~~i~eL~-~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~~L~kA~ 65 (69)
T 3b5n_B 13 LKLEKSMAELT-QLFNDMEELVIEQQENVDVIDKNVEDAQLDVEQGVGHTDKAV 65 (69)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666666 678888888889999999999999888888877766665443
No 431
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=52.87 E-value=22 Score=28.64 Aligned_cols=24 Identities=25% Similarity=0.285 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 550 LENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 550 ~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
-+.+.+|..++..=.+|+++||..
T Consensus 24 de~I~eLE~~L~~kd~eI~eLr~~ 47 (67)
T 1zxa_A 24 EERIKELEKRLSEKEEEIQELKRK 47 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444555555543
No 432
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=52.84 E-value=20 Score=27.77 Aligned_cols=27 Identities=19% Similarity=0.191 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 548 SILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 548 ~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
.+..++++|..-.....+||+||+++|
T Consensus 22 ~L~~kv~~Le~~c~e~eQEieRL~~LL 48 (58)
T 3a2a_A 22 QLAAKIQHLEFSCSEKEQEIERLNKLL 48 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666666666667777777654
No 433
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=52.74 E-value=31 Score=37.86 Aligned_cols=18 Identities=17% Similarity=0.191 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 008196 553 QAELMKEIKSLRKENHQL 570 (574)
Q Consensus 553 ~~~l~~E~~~lr~en~~l 570 (574)
++-|+.=|+.+|.|.|||
T Consensus 133 IrvLQsnLedq~~kIQRL 150 (562)
T 3ghg_A 133 IQLLQKNVRAQLVDMKRL 150 (562)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444444
No 434
>3f5h_A Type I polyketide synthase PIKAIII, type I polyketide synthase pikaiv fusion protein...; docking domain, pikromycin, H2-T2; 1.75A {Streptomyces venezuelae}
Probab=52.68 E-value=45 Score=26.91 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=29.4
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 529 IEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 529 ~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
++|+||--+-++-|..--+.+.+-+.....|++++|++++++..
T Consensus 19 ~~~~~~~~~~~~tM~~~eekLrdyLrrvtadL~~aR~rLrelEa 62 (68)
T 3f5h_A 19 EALIRMALGPRNTMTSSNEQLVDALRASLKENEELRKESRRRAD 62 (68)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35666766666666544455566667777888888877777653
No 435
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=52.48 E-value=26 Score=23.76 Aligned_cols=23 Identities=39% Similarity=0.403 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 008196 550 LENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 550 ~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
..+++-|.+||.+|+=|.--|.|
T Consensus 8 kqeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 8 KQEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc
Confidence 34456677777777777766655
No 436
>2xus_A Breast cancer metastasis-suppressor 1; protein binding; 1.912A {Homo sapiens}
Probab=52.25 E-value=29 Score=26.32 Aligned_cols=39 Identities=15% Similarity=0.287 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 517 QKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRK 565 (574)
Q Consensus 517 ~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~ 565 (574)
|.+.-+||-+|+ |||..++..| |.++++.|.+|++.|+.
T Consensus 8 r~e~ld~l~~LE----kqF~~LkEql------Y~ERl~ql~~~Leel~~ 46 (49)
T 2xus_A 8 RSECVSEMLDLE----KQFSELKEKL------FRERLSQLRLRLEEVGA 46 (49)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHH------HHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHH----HHHHHHHHHH------HHHHHHHHHHHHHHHHc
Confidence 445555665555 8999888776 67778887777776654
No 437
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=51.91 E-value=1.3e+02 Score=31.21 Aligned_cols=84 Identities=12% Similarity=0.275 Sum_probs=47.4
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEcc----CCCe--E-EEEEeC--CCcEEEEeCCCCCceeEEe
Q 008196 7 EHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSR----NSRH--L-LVTAGD--DGTLHLWDTTGRSPKVSWL 77 (574)
Q Consensus 7 ~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSP----dGr~--L-LaSgS~--DGtVrLWDl~~~~~ll~tl 77 (574)
.+++.-...+-+.|||+ +|+.+..+.. +.+ .-|..-| .|+. + +++.-. +++|.+|++......+..+
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~-nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT--GKL-NNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC--SCE-EEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC--CCc-ccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 45555557788999999 8999988864 232 2224444 2222 3 344444 5899999773211123333
Q ss_pred cc------CC-CCeEEEEE--cCCCC
Q 008196 78 KQ------HS-APTAGISF--SSDDK 94 (574)
Q Consensus 78 ~g------H~-~~VtSVaF--SPDG~ 94 (574)
.. .. ..+..+|+ ++.+.
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g 142 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTG 142 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTC
T ss_pred cccccCcCCCCCCeeEEEEEecCCCC
Confidence 11 11 45677887 66433
No 438
>3v86_A De novo design helix; computational design of A protein crystal, helical coil, DE designed helix, de novo protein; 2.91A {Synthetic}
Probab=51.73 E-value=20 Score=23.30 Aligned_cols=21 Identities=29% Similarity=0.480 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 008196 550 LENQAELMKEIKSLRKENHQL 570 (574)
Q Consensus 550 ~~~~~~l~~E~~~lr~en~~l 570 (574)
..++.||..|+++|+.|...|
T Consensus 6 kdevgelkgevralkdevkdl 26 (27)
T 3v86_A 6 KDEVGELKGEVRALKDEVKDL 26 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhHHHHHHHHHhcc
Confidence 344567778888888877655
No 439
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=51.63 E-value=16 Score=25.78 Aligned_cols=22 Identities=23% Similarity=0.386 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 008196 552 NQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 552 ~~~~l~~E~~~lr~en~~lr~~ 573 (574)
+.....++|+.||++|..|+..
T Consensus 8 Kn~a~qqDIddlkrQN~~Le~Q 29 (34)
T 1a93_B 8 KNDTHQQDIDDLKRQNALLEQQ 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHhhHhhHHHHHHHHHHHHHH
Confidence 4566777788888888777653
No 440
>3e0s_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Chlorobaculum tepidum}
Probab=51.25 E-value=46 Score=33.71 Aligned_cols=72 Identities=15% Similarity=0.235 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhh
Q 008196 502 LQLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILE-----NQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 502 ~~~~~~~~~e~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~-----~~~~l~~E~~~lr~en~~lr~~ 573 (574)
-+.|+.+|+++++.++..-..=..+-..|-|-|++.-=.-|++++.-|.. ..+.+.+|++.|-++.-.+|++
T Consensus 18 ~~a~~~il~~~l~~~~~~e~~v~~~~D~E~lHqmRValRRLRs~L~~f~~~l~~~~~~~l~~~lk~La~~LG~~RD~ 94 (326)
T 3e0s_A 18 HENVRRLLQFTTSIMEANEEGIRKDIDSEFLHDFRVAIRRSRSILRLLNGVFDPEKTAWMLAGLRELGKRTNDLRDS 94 (326)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHTTCCTHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhcCcHhHHHHHHHHHHHHHHHhhHHHH
Confidence 48899999999999887666555556677788999999999999988854 4667888999998888888864
No 441
>2ve7_C Kinetochore protein NUF2, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_D*
Probab=51.23 E-value=25 Score=34.88 Aligned_cols=42 Identities=10% Similarity=0.048 Sum_probs=30.8
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 533 RQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 533 rqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
=-|-.-+.|.....+++..+.+++.+|+++|.+||+.|.+.|
T Consensus 130 INF~~FRE~~~~~~~e~~~~~e~~~~~i~ql~~En~~le~~I 171 (250)
T 2ve7_C 130 INFIHFREACRETYMEFLWQYKSSADKMQQLNAAHQEALMKL 171 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445556666778888888888888888888888877643
No 442
>1z0k_B FYVE-finger-containing RAB5 effector protein rabenosyn-5; RAB gtpases, effector complex, vesicular trafficking, protein transport; HET: GTP MES; 1.92A {Homo sapiens} SCOP: a.2.19.1
Probab=51.09 E-value=31 Score=27.98 Aligned_cols=20 Identities=25% Similarity=0.336 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 008196 547 SSILENQAELMKEIKSLRKE 566 (574)
Q Consensus 547 ~~~~~~~~~l~~E~~~lr~e 566 (574)
+-+..++.||.+|+.+|+.|
T Consensus 49 ~tLe~NLrEL~~ei~~~q~~ 68 (69)
T 1z0k_B 49 RTLQENLRQLQDEYDQQQTE 68 (69)
T ss_dssp HHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 44567888899988887644
No 443
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=50.99 E-value=44 Score=25.48 Aligned_cols=19 Identities=26% Similarity=0.377 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 008196 552 NQAELMKEIKSLRKENHQL 570 (574)
Q Consensus 552 ~~~~l~~E~~~lr~en~~l 570 (574)
-+.+-++||+.|++|.++|
T Consensus 31 ~L~~AR~el~~Lkeele~L 49 (51)
T 3m91_A 31 TLKEARQQLLALREEVDRL 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3444555555666665555
No 444
>1p9i_A Cortexillin I/GCN4 hybrid peptide; coiled-coil, unknown function; 1.17A {Synthetic} SCOP: h.1.10.1
Probab=50.36 E-value=15 Score=24.52 Aligned_cols=23 Identities=26% Similarity=0.187 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 008196 549 ILENQAELMKEIKSLRKENHQLR 571 (574)
Q Consensus 549 ~~~~~~~l~~E~~~lr~en~~lr 571 (574)
+..-++.|..|+++|+..-+.|-
T Consensus 4 lnallasleaenkqlkakveell 26 (31)
T 1p9i_A 4 LNALLASLEAENKQLKAKVEELL 26 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445777788888888777763
No 445
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1
Probab=50.31 E-value=18 Score=29.52 Aligned_cols=24 Identities=8% Similarity=0.131 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 550 LENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 550 ~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
.+=+..|.++++.|++|+++||+.
T Consensus 56 i~YI~~L~~~~~~L~~e~~~L~~~ 79 (80)
T 1hlo_A 56 TEYIQYMRRKNHTHQQDIDDLKRQ 79 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334578888888888888888863
No 446
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=50.02 E-value=1.5e+02 Score=27.10 Aligned_cols=68 Identities=13% Similarity=0.282 Sum_probs=44.9
Q ss_pred HHHHHHHHHH---HHHHHHHHHHHHHH--HhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 502 LQLFQRTLEE---TLDSFQKSIHEDMR--NLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQ 569 (574)
Q Consensus 502 ~~~~~~~~~e---~l~~~~~~~~~d~~--nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~ 569 (574)
.+-|...++| .|.+|...+.+||. .-=++||+.|...+.|...-.+..+++..+-...++.+|+|.+.
T Consensus 70 ~e~l~~~veeA~~~L~eYn~rL~~E~~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~ 142 (152)
T 4fla_A 70 AERLSKTVDEACLLLAEYNGRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKS 142 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566666 46777777777774 33389999999987777555555555555555666677776654
No 447
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=49.89 E-value=27 Score=29.68 Aligned_cols=58 Identities=19% Similarity=0.251 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 502 LQLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 502 ~~~~~~~~~e~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
+.-.+|.|+.-.+..-=-.++ +-|-+.++.|+..+..+ ++.|.+|+.++.+|...+++
T Consensus 26 lKq~RRtlKNRgyAq~CR~Kr---------~~q~~~LE~e~~~L~~e----~~~L~~e~~~~~~e~d~~k~ 83 (90)
T 2wt7_B 26 LKQKRRTLKNRGYAQSCRYKR---------VQQKHHLENEKTQLIQQ----VEQLKQEVSRLARERDAYKV 83 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhHHHHHHHHHH---------HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 344566666654433222222 22334444444444333 34555555555555555544
No 448
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=49.64 E-value=38 Score=28.10 Aligned_cols=7 Identities=71% Similarity=0.937 Sum_probs=2.6
Q ss_pred HHHHHHH
Q 008196 562 SLRKENH 568 (574)
Q Consensus 562 ~lr~en~ 568 (574)
+|++||.
T Consensus 52 ~LkeEN~ 58 (79)
T 2zxx_A 52 RLRKENK 58 (79)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 449
>4i0x_B ESAT-6-like protein MAB_3113; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=48.72 E-value=1.2e+02 Score=25.26 Aligned_cols=70 Identities=13% Similarity=0.219 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 500 FTLQLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHM--QETQMSNVMSSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 500 ~~~~~~~~~~~e~l~~~~~~~~~d~~nlh~e~lrqf~~--~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
+.+.-|+... ..|......|..++..|.-.+=.--.. |+.|=. +.|.+.+++.....+.|++-+++|++.
T Consensus 11 v~~~~l~~~a-~~~~~~~~~i~~~l~~L~~~v~~L~~~g~W~G~A~---~ay~~~~~~W~~~a~~l~~~L~~i~~~ 82 (103)
T 4i0x_B 11 FDLDHIEQVT-SRARGFKEFVTENLDQLESRAQKLVQSGQWAGAAA---AAYSQAHKEWMDAARELVEGLSQMEEA 82 (103)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCeechHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555554 456667777777777776665555555 666533 344445566666666666666665543
No 450
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=48.67 E-value=1.1e+02 Score=26.87 Aligned_cols=23 Identities=17% Similarity=0.310 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 008196 550 LENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 550 ~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
....+++..|+++|..++..|.+
T Consensus 82 RadREkl~~eKe~L~~ql~~Lq~ 104 (110)
T 2v4h_A 82 RHAREKLVEKKEYLQEQLEQLQR 104 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHhHHHHHHHHHHHHHH
Confidence 34445566666666666655544
No 451
>1n7s_B Syntaxin 1A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_B 3rk3_B 3rl0_B 1kil_B
Probab=48.56 E-value=96 Score=24.27 Aligned_cols=50 Identities=12% Similarity=0.253 Sum_probs=38.4
Q ss_pred HHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 518 KSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENH 568 (574)
Q Consensus 518 ~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~ 568 (574)
+.|.++|.-|| +|++++..+=.|+..+++.|..++..-..-++.=.+|..
T Consensus 15 ~~Ie~~i~eL~-~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~~L~ 64 (68)
T 1n7s_B 15 IKLENSIRELH-DMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTK 64 (68)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666666 678888888889999999999888888877776555544
No 452
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=48.56 E-value=29 Score=24.34 Aligned_cols=27 Identities=11% Similarity=0.165 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 540 TQMSNVMSSILENQAELMKEIKSLRKE 566 (574)
Q Consensus 540 ~e~~~~~~~~~~~~~~l~~E~~~lr~e 566 (574)
+++..-++++..+...|..|+.+||+=
T Consensus 4 nQledKvEel~~~~~~l~nEv~Rl~~l 30 (34)
T 2r2v_A 4 KQVADKLEEVASKLYHNANELARVAKL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 345667788888999999999999973
No 453
>1sfc_B Protein (syntaxin 1A), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1l4a_B
Probab=48.36 E-value=1e+02 Score=25.05 Aligned_cols=53 Identities=11% Similarity=0.228 Sum_probs=41.8
Q ss_pred HHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 518 KSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 571 (574)
Q Consensus 518 ~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr 571 (574)
+.|.++|.-|| +|++++.++=.|+..+++.|..++..-..-++.=.+|..+-+
T Consensus 24 ~~ie~~i~eL~-~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~eL~kA~ 76 (83)
T 1sfc_B 24 IKLENSIRELH-DMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAV 76 (83)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777777 688888888899999999999999888888877766665543
No 454
>2cly_A ATP synthase B chain, mitochondrial; mitochondrion, ION transport, CF(0), stator, transport, acetylation, hydrogen ION transport; 2.8A {Bos taurus} SCOP: f.52.1.1 PDB: 2wss_T*
Probab=48.29 E-value=56 Score=31.80 Aligned_cols=69 Identities=9% Similarity=0.102 Sum_probs=40.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 497 GSNFTLQLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 497 ~~~~~~~~~~~~~~e~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
|..++ +++..-+++. ..++.++|+.|++-|++=-..+.++..+.+. ...+-+..+|+-+|..|..-+.|
T Consensus 75 Gp~~a-~~~D~~~~~i-----~~~ln~~r~~~i~~lk~~Ie~~k~~q~~~~~-~~~Lf~~~kEn~al~lEa~yre~ 143 (214)
T 2cly_A 75 GASVG-EFADKLNEQK-----IAQLEEVKQASIKQIQDAIDMEKSQQALVQK-RHYLFDVQRNNIAMALEVTYRER 143 (214)
T ss_dssp ----C-HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTGG-GHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHH-HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34442 5555555544 3346788899999988776666666655444 33455557777777776655544
No 455
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=48.09 E-value=3.1e+02 Score=30.07 Aligned_cols=101 Identities=15% Similarity=0.049 Sum_probs=59.1
Q ss_pred ccCCCCEEEEEe-CCCcEEEEECCCCceeEEecC------CCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCcee
Q 008196 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAELKD------PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (574)
Q Consensus 2 FSpDG~~LASGS-~DGtVrIWDl~Tg~~l~t~~g------h~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll 74 (574)
|++.++.|+-.. ..+.|+.+++........+.. .-..+ ..|++.+.++.|.++-...+.|.+.++.+....
T Consensus 347 ~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p-~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~~- 424 (628)
T 4a0p_A 347 YDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQP-YDLSIDIYSRYIYWTCEATNVINVTRLDGRSVG- 424 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCE-EEEEEETTTTEEEEEETTTTEEEEEETTSCEEE-
T ss_pred EecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCc-ceEEeeccCCeEEEEcCCCCEEEEEECCCCeEE-
Confidence 344444444333 456677776643222222222 11234 778999988788888888899999999774222
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEEecCC
Q 008196 75 SWLKQHSAPTAGISFSSDDKAVSSLCWQRA 104 (574)
Q Consensus 75 ~tl~gH~~~VtSVaFSPDG~~LaS~sWD~s 104 (574)
..+...-...++|++.|...+|+-.-|...
T Consensus 425 ~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~ 454 (628)
T 4a0p_A 425 VVLKGEQDRPRAVVVNPEKGYMYFTNLQER 454 (628)
T ss_dssp EEEECTTCCEEEEEEETTTTEEEEEEEETT
T ss_pred EEEeCCCCceeeEEEecCCCeEEEeecCCC
Confidence 122333456899999995555555455443
No 456
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=47.85 E-value=1.4e+02 Score=29.41 Aligned_cols=90 Identities=12% Similarity=0.127 Sum_probs=45.8
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEec-CCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCCCC
Q 008196 5 KDEHLASISLSGDLILHNLASGAKAAELK-DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAP 83 (574)
Q Consensus 5 DG~~LASGS~DGtVrIWDl~Tg~~l~t~~-gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~~~ 83 (574)
+++.++.+ .++.|.. ..+.|+....+. .....+ ..+++.+++ .+++.+...+..+-+|-.+..-.. ....+...
T Consensus 132 ~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~-~~~~~~~~~-~~~~~g~~G~~~~S~d~gG~tW~~-~~~~~~~~ 206 (327)
T 2xbg_A 132 NGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVM-RNLNRSPSG-EYVAVSSRGSFYSTWEPGQTAWEP-HNRTTSRR 206 (327)
T ss_dssp TTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCE-EEEEECTTS-CEEEEETTSSEEEEECTTCSSCEE-EECCSSSC
T ss_pred CCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcce-EEEEEcCCC-cEEEEECCCcEEEEeCCCCCceeE-CCCCCCCc
Confidence 44445444 3444322 222344433333 233344 677899987 556655444444445542221111 12334557
Q ss_pred eEEEEEcCCCCEEEEE
Q 008196 84 TAGISFSSDDKAVSSL 99 (574)
Q Consensus 84 VtSVaFSPDG~~LaS~ 99 (574)
+..+.+.+++..++..
T Consensus 207 ~~~~~~~~~g~~~~~~ 222 (327)
T 2xbg_A 207 LHNMGFTPDGRLWMIV 222 (327)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred cceeEECCCCCEEEEe
Confidence 8899999988766543
No 457
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=47.82 E-value=82 Score=27.68 Aligned_cols=19 Identities=21% Similarity=0.261 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 008196 553 QAELMKEIKSLRKENHQLR 571 (574)
Q Consensus 553 ~~~l~~E~~~lr~en~~lr 571 (574)
+..|.+|+..||.+|+.|.
T Consensus 37 ~~~Lq~El~~lr~~~~~l~ 55 (111)
T 2v66_B 37 VSVLEDDLSQTRAIKEQLH 55 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3445555555665555543
No 458
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=47.58 E-value=20 Score=28.23 Aligned_cols=28 Identities=21% Similarity=0.326 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 541 QMSNVMSSILENQAELMKEIKSLRKENH 568 (574)
Q Consensus 541 e~~~~~~~~~~~~~~l~~E~~~lr~en~ 568 (574)
||..-++.+..++++|..||++||++..
T Consensus 34 ~Le~~v~~L~~eN~~L~~ev~~Lr~~l~ 61 (63)
T 2dgc_A 34 QLEDKVEELLSKNYHLENEVARLKKLVG 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444455556667778888888887654
No 459
>3n7n_E Monopolin complex subunit LRS4; meiosis, rDNA, replication; 3.90A {Saccharomyces cerevisiae}
Probab=47.19 E-value=4 Score=34.91 Aligned_cols=25 Identities=24% Similarity=0.304 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 549 ILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 549 ~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
+...+.+|..|++.+++||++||.+
T Consensus 48 LQrQv~qLt~~lQ~~~~Ene~Lke~ 72 (95)
T 3n7n_E 48 LQRQIAQLNKQLQLSFQENEKLLSV 72 (95)
T ss_dssp -------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556789999999999999999964
No 460
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=46.60 E-value=90 Score=31.52 Aligned_cols=56 Identities=23% Similarity=0.442 Sum_probs=31.2
Q ss_pred EEEEEccCCCeEEEEEeC-------------CCcEEEEeCCCCC-------ceeEEeccCCCCeEEEEEcC-CCCEEEE
Q 008196 41 RVLDYSRNSRHLLVTAGD-------------DGTLHLWDTTGRS-------PKVSWLKQHSAPTAGISFSS-DDKAVSS 98 (574)
Q Consensus 41 s~LafSPdGr~LLaSgS~-------------DGtVrLWDl~~~~-------~ll~tl~gH~~~VtSVaFSP-DG~~LaS 98 (574)
..|+|.||| +|+++-+. .+.|.-+|..+.- ....+..+|.. ...++|++ +|..+++
T Consensus 138 ~~l~~~pDG-~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rn-p~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 138 GRIRFGPDG-MLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRN-PQGIDWHRASGVMVAT 214 (354)
T ss_dssp CCEEECTTS-CEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSC-CCEEEECTTTCCEEEE
T ss_pred ceEEECCCC-cEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCC-cceEEEeCCCCCEEEE
Confidence 446999999 55555432 2455555554420 01112345554 46889998 5665555
No 461
>3w03_C DNA repair protein XRCC4; coiled-coil, NHEJ, DSBS repair, KU70/80, DNA-PKCS, DNA ligas binding protein; HET: DNA; 8.49A {Homo sapiens}
Probab=46.51 E-value=36 Score=32.45 Aligned_cols=27 Identities=15% Similarity=0.158 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 547 SSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 547 ~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
.++.+++..|.+||++|++|-++...+
T Consensus 155 ~~L~~~n~~LqkeNeRL~~E~n~~l~q 181 (184)
T 3w03_C 155 AENQAKNEHLQKENERLLRDWNDVQGR 181 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344667788889999999887776544
No 462
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=46.39 E-value=17 Score=24.58 Aligned_cols=20 Identities=45% Similarity=0.469 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 008196 553 QAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 553 ~~~l~~E~~~lr~en~~lr~ 572 (574)
+++|.||+.+-..||-||-|
T Consensus 3 vaqlekevaqaeaenyqleq 22 (33)
T 1fmh_A 3 VAQLEKEVAQAEAENYQLEQ 22 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHH
Confidence 45666677666666666654
No 463
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=45.90 E-value=25 Score=34.40 Aligned_cols=58 Identities=10% Similarity=0.182 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 503 QLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEI 560 (574)
Q Consensus 503 ~~~~~~~~e~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~ 560 (574)
+-||.-|.-.+.+++..+++++..|+--|--.....+.-+..-++++.+.+.-+.+|+
T Consensus 113 eelr~~L~P~~eel~~~~~~~~eel~~~L~p~~eelr~kl~~~veelk~~l~P~~ee~ 170 (243)
T 2a01_A 113 ELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDEL 170 (243)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHCCSCCSSTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 3444444455556666666777766655544444455555555555555554444443
No 464
>2j49_A Transcription initiation factor TFIID subunit 5; nuclear protein, transcription regulation, TA TFIID, WD repeat; 2.3A {Saccharomyces cerevisiae} SCOP: d.379.1.1
Probab=45.47 E-value=16 Score=33.54 Aligned_cols=64 Identities=9% Similarity=0.164 Sum_probs=51.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH----HHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 008196 499 NFTLQLFQRTLEETLDSFQKSIHEDM----RNLHIEILRQFHMQETQMSNVMSSILENQAELM-KEIKSLRK 565 (574)
Q Consensus 499 ~~~~~~~~~~~~e~l~~~~~~~~~d~----~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~-~E~~~lr~ 565 (574)
--++..|++.|+++||-++.|+++=+ .-++|||++.+ ..|-+..++.+.....+.. ++|+.|+.
T Consensus 11 ~~~y~~Lr~wv~~sld~yk~EL~~lLyPlFvh~yL~Lv~~g---~~~A~~F~~~f~~~~~~~~~~~i~~L~~ 79 (148)
T 2j49_A 11 IRAYSMLKNWVDSSLEIYKPELSYIMYPIFIYLFLNLVAKN---PVYARRFFDRFSPDFKDFHGSEINRLFS 79 (148)
T ss_dssp HHHHHHHHHHHHTSCTTTHHHHHHHHHHHHHHHHHHHHHHC---HHHHHHHHHHHGGGGHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHhCcHhhHHHHHHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHhHHhHHHHHHHHHHHhc
Confidence 34678999999999999988877654 56799999998 5678888999888877664 67777764
No 465
>1jth_B Syntaxin 1A; coiled-coil, polar layer, endocytosis-exocytosis complex; 2.00A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1hvv_A* 1urq_B
Probab=45.39 E-value=1.2e+02 Score=24.33 Aligned_cols=51 Identities=12% Similarity=0.258 Sum_probs=39.8
Q ss_pred HHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 518 KSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQ 569 (574)
Q Consensus 518 ~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~ 569 (574)
+.|..+|.-|| +|+.++.++=.|+..+++.|..++..-..-++.=.+|..+
T Consensus 13 ~~ie~~i~eL~-~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~~L~k 63 (77)
T 1jth_B 13 IKLENSIRELH-DMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKK 63 (77)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666776 6888889888999999999998888888777766666544
No 466
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=44.69 E-value=17 Score=24.56 Aligned_cols=20 Identities=40% Similarity=0.504 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 008196 552 NQAELMKEIKSLRKENHQLR 571 (574)
Q Consensus 552 ~~~~l~~E~~~lr~en~~lr 571 (574)
+++-|..||.+|++|.--|.
T Consensus 3 eiaalkqeiaalkkeiaalk 22 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAALK 22 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 45666677777777665553
No 467
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=44.61 E-value=74 Score=31.65 Aligned_cols=92 Identities=14% Similarity=0.147 Sum_probs=54.8
Q ss_pred ccCCCCEEEEEe----CCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEe
Q 008196 2 YNCKDEHLASIS----LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (574)
Q Consensus 2 FSpDG~~LASGS----~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl 77 (574)
|+++|++|+-.. .+..|...++. |.....+..+.. .+|+++++.|..+......|..-++.+.... .+
T Consensus 111 ~s~~g~~Iy~~~~~~~~~~~Iy~~~~d-Gs~~~~lt~~~~-----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~--~l 182 (302)
T 3s25_A 111 ASLIGNYIYYLHYDTQTATSLYRIRID-GEEKKKIKNHYL-----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA--LF 182 (302)
T ss_dssp EEEETTEEEEEEESSSSCEEEEEEETT-SCCCEEEESSCC-----CCSEEETTEEEEECTTTCCEEEEETTTTEEE--EE
T ss_pred EEEeCCEEEEEeecCCCCceEEEEECC-CCCeEEEeCCCc-----eEeeEECCEEEEEeCCCceEEEEECCCCCEE--EE
Confidence 566778777665 34456666664 444445554432 2567788786667554677877777664322 22
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEEecCC
Q 008196 78 KQHSAPTAGISFSSDDKAVSSLCWQRA 104 (574)
Q Consensus 78 ~gH~~~VtSVaFSPDG~~LaS~sWD~s 104 (574)
.. .... ..+.|++.+|+-..|...
T Consensus 183 ~~--~~~~-~~~~P~g~~iy~t~~~~~ 206 (302)
T 3s25_A 183 YD--CNCY-KPVVLDDTNVYYMDVNRD 206 (302)
T ss_dssp EC--SCEE-EEEEEETTEEEEEEGGGT
T ss_pred eC--CCcc-ceeeecCCEEEEEEcCCC
Confidence 22 2222 346699999988777643
No 468
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=43.58 E-value=80 Score=33.32 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=10.7
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHH
Q 008196 529 IEILRQFHMQETQMSNVMSSILE 551 (574)
Q Consensus 529 ~e~lrqf~~~~~e~~~~~~~~~~ 551 (574)
.|+||+-..|-++...++++|.+
T Consensus 94 ~~~lk~~~~q~~dndn~~~e~s~ 116 (390)
T 1deq_A 94 VELMRGDFAKANNNDNTFKQINE 116 (390)
T ss_pred HHHHHHHHHhhccchHHHHHHHH
Confidence 35555555554444444444443
No 469
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*
Probab=43.55 E-value=4.9 Score=39.66 Aligned_cols=23 Identities=30% Similarity=0.486 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 008196 551 ENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 551 ~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
++++++.+|++.||+|.++|++.
T Consensus 256 ~~~~~~~~~~~~l~~~~~~l~~~ 278 (285)
T 3rvy_A 256 SHEDNINNEIIKLREEIVELKEL 278 (285)
T ss_dssp -----------------------
T ss_pred cchHHHHHHHHHHHHHHHHHHHH
Confidence 44566666667777776666654
No 470
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=42.88 E-value=41 Score=25.63 Aligned_cols=33 Identities=24% Similarity=0.388 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 541 QMSNVMSSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 541 e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
|+..-+..+.+++.+|.+.+++-|.|...|+..
T Consensus 13 ~l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkee 45 (51)
T 3m91_A 13 QLEARIDSLAARNSKLMETLKEARQQLLALREE 45 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555666777777777777777777754
No 471
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=42.81 E-value=32 Score=30.23 Aligned_cols=25 Identities=24% Similarity=0.219 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 547 SSILENQAELMKEIKSLRKENHQLR 571 (574)
Q Consensus 547 ~~~~~~~~~l~~E~~~lr~en~~lr 571 (574)
+.-.++++.|.++|+.|.+|.+|.|
T Consensus 92 ~~e~~~~~~L~~~i~~Le~el~~~R 116 (117)
T 3kin_B 92 EKEKEKNKALKSVIQHLEVELNRWR 116 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3334455677777778888877776
No 472
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=42.60 E-value=2.4e+02 Score=30.76 Aligned_cols=93 Identities=15% Similarity=0.142 Sum_probs=60.8
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEeccCC
Q 008196 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (574)
Q Consensus 2 FSpDG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~gH~ 81 (574)
.+|..+.||--. ..++.|+|+++...+..+.-.. .|+.= .|-.+. . |+- -.+..|+.|++.+.......+.-|.
T Consensus 73 MnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfW-kWis~~-~-l~l-VT~taVyHWsi~~~s~P~kvFdR~~ 146 (494)
T 1bpo_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFW-KWISLN-T-VAL-VTDNAVYHWSMEGESQPVKMFDRHS 146 (494)
T ss_dssp ECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEE-EEEETT-E-EEE-ECSSEEEEEESSSSCCCEEEEECCG
T ss_pred eCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEE-EecCCC-e-EEE-EcCCeeEEecccCCCCchhheecch
Confidence 366777777664 6789999999998888877544 44333 565553 3 332 3567899999966444444454443
Q ss_pred ----CCeEEEEEcCCCCEEEEEE
Q 008196 82 ----APTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 82 ----~~VtSVaFSPDG~~LaS~s 100 (574)
..|-.-.-+++.+|++..+
T Consensus 147 ~L~~~QIInY~~d~~~kW~~l~G 169 (494)
T 1bpo_A 147 SLAGCQIINYRTDAKQKWLLLTG 169 (494)
T ss_dssp GGTTCEEEEEEECTTSSEEEEEE
T ss_pred hcccceEEEEEECCCCCeEEEEe
Confidence 2355555678888888643
No 473
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=42.16 E-value=74 Score=26.06 Aligned_cols=32 Identities=13% Similarity=0.004 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 543 SNVMSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 543 ~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
...++++...+.+..++|.+|+++.+.|++.|
T Consensus 27 E~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl 58 (78)
T 3efg_A 27 EQALTELSEALADARLTGARNAELIRHLLEDL 58 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666667778888888888888887764
No 474
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=42.00 E-value=1.6e+02 Score=30.34 Aligned_cols=81 Identities=11% Similarity=0.068 Sum_probs=46.9
Q ss_pred CCcEEEEECCCC-ce---eEEecCCCCCeEEEEEEccCCCeEEEEEe-----------------CCCcEEEEeCCCCCce
Q 008196 15 SGDLILHNLASG-AK---AAELKDPNEQVLRVLDYSRNSRHLLVTAG-----------------DDGTLHLWDTTGRSPK 73 (574)
Q Consensus 15 DGtVrIWDl~Tg-~~---l~t~~gh~~~Vvs~LafSPdGr~LLaSgS-----------------~DGtVrLWDl~~~~~l 73 (574)
+.+|.||++..+ .. +..+.+..-.....+++.++| .+.++.. ..|.|..||.. ...
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G-~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~ 214 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPE-HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVR 214 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETT-EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCE
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCC-CEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEE
Confidence 567778877653 22 344444333333677899998 6566643 12345445542 222
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEE
Q 008196 74 VSWLKQHSAPTAGISFSSDDKAVSSLC 100 (574)
Q Consensus 74 l~tl~gH~~~VtSVaFSPDG~~LaS~s 100 (574)
.+...-..-+.|+|+||++.|+.+.
T Consensus 215 --~~~~~l~~pNGia~spDg~~lYvad 239 (355)
T 3sre_A 215 --VVAEGFDFANGINISPDGKYVYIAE 239 (355)
T ss_dssp --EEEEEESSEEEEEECTTSSEEEEEE
T ss_pred --EeecCCcccCcceECCCCCEEEEEe
Confidence 2222223468999999999887754
No 475
>1got_G GT-gamma; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: a.137.3.1 PDB: 1tbg_E 2trc_G 1b9y_B 1b9x_B 1a0r_G*
Probab=41.57 E-value=14 Score=30.13 Aligned_cols=15 Identities=33% Similarity=0.496 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHH
Q 008196 553 QAELMKEIKSLRKEN 567 (574)
Q Consensus 553 ~~~l~~E~~~lr~en 567 (574)
++.|++||++||.|.
T Consensus 19 ~~~lr~~veqLr~el 33 (73)
T 1got_G 19 KDKLKMEVDQLKKEV 33 (73)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 344445555554443
No 476
>2p0t_A UPF0307 protein pspto_4464; APC85033, conserved putative protein, pseudomonas syringae P STR. DC3000, structural genomics, PSI-2; 2.19A {Pseudomonas syringae PV} SCOP: a.290.1.1
Probab=41.19 E-value=23 Score=33.54 Aligned_cols=44 Identities=7% Similarity=0.095 Sum_probs=25.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHH
Q 008196 497 GSNFTLQLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQET 540 (574)
Q Consensus 497 ~~~~~~~~~~~~~~e~l~~~~~~~~~d~~nlh~e~lrqf~~~~~ 540 (574)
|--=|+|||=.+|++.=-+-.++.-+.++|-|..-...||..+.
T Consensus 67 arRRQlqyIGKLmR~~D~e~I~~al~~~~~~~~~~~~~~h~lE~ 110 (176)
T 2p0t_A 67 ARKRHILFIGKLMRDQDQEAILVLLDQLDASTRQYNERFHNLER 110 (176)
T ss_dssp HHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHhhcccHHHHHHHHHHHH
Confidence 45568999988886532222333344555555555555555444
No 477
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=41.17 E-value=78 Score=29.48 Aligned_cols=48 Identities=2% Similarity=0.209 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHH
Q 008196 503 QLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSIL 550 (574)
Q Consensus 503 ~~~~~~~~e~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~ 550 (574)
+-|+..|..-|.++|..+--=+..||--+-+.....+..|.-..+++.
T Consensus 81 ~~Lr~~l~kdlee~r~~l~P~~~e~~~~~~~~~e~lr~~l~Py~~el~ 128 (185)
T 3r2p_A 81 EGLRQEMSKDLEEVKAKVQPYLDDFQKKWQEEMELYRQKVEPLRAELQ 128 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 445666555555555555444444444444444444444444444443
No 478
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=40.92 E-value=49 Score=30.74 Aligned_cols=62 Identities=11% Similarity=0.209 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 502 LQLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKE 566 (574)
Q Consensus 502 ~~~~~~~~~e~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~e 566 (574)
.+-||.-|..-|.++|..+..-+..||--|-..+...+..|.-.++++.+ ++.+..+.||+.
T Consensus 97 ~e~Lr~~L~~d~EelR~~l~p~~~el~~~l~~~~EelR~kl~P~~eeL~~---~~~~~~eeLr~k 158 (165)
T 1gs9_A 97 LQAAQARLGADMEDVRGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRK---RLLRDADDLQKR 158 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhhHHHHHHH
Confidence 44455555556666665555544444444444444555555555555554 344445555543
No 479
>3q4f_C DNA repair protein XRCC4; DSB repair, nuclear, recombination-recombination complex, DN protein-protein binding complex; HET: DNA; 5.50A {Homo sapiens}
Probab=40.88 E-value=43 Score=31.86 Aligned_cols=21 Identities=19% Similarity=0.167 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 008196 547 SSILENQAELMKEIKSLRKEN 567 (574)
Q Consensus 547 ~~~~~~~~~l~~E~~~lr~en 567 (574)
++...++..|.|||+||.+|-
T Consensus 164 ~~L~a~N~hLqkENeRL~~e~ 184 (186)
T 3q4f_C 164 AENQAKNEHLQKENERLLRDW 184 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 444556667777777776663
No 480
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=40.64 E-value=3.2e+02 Score=30.16 Aligned_cols=90 Identities=12% Similarity=0.045 Sum_probs=53.9
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEecC----CCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 008196 4 CKDEHLASISLSGDLILHNLASGAKAAELKD----PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (574)
Q Consensus 4 pDG~~LASGS~DGtVrIWDl~Tg~~l~t~~g----h~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g 79 (574)
.+|++|..|..++-|.+||..+++.. .+.. .....+.++...++| .+.+ |.. +-|.+||..+... ..+..
T Consensus 415 ~~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g-~lwi-gt~-~Gl~~~~~~~~~~--~~~~~ 488 (795)
T 4a2l_A 415 EKKSLVYIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEG-NLWL-GTL-SALVRFNPEQRSF--TTIEK 488 (795)
T ss_dssp TTTTEEEEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSS-CEEE-EES-SCEEEEETTTTEE--EECCB
T ss_pred CCCCEEEEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCC-CEEE-Eec-CceeEEeCCCCeE--EEccc
Confidence 45554666777777999999777643 3331 112334777888887 4333 334 4588899865321 12211
Q ss_pred -------CCCCeEEEEEcCCCCEEEEE
Q 008196 80 -------HSAPTAGISFSSDDKAVSSL 99 (574)
Q Consensus 80 -------H~~~VtSVaFSPDG~~LaS~ 99 (574)
+...|.++...++|...+..
T Consensus 489 ~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 489 EKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp CTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred cccccccCCceEEEEEECCCCCEEEEe
Confidence 23568999988888766543
No 481
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=40.47 E-value=1.8e+02 Score=32.22 Aligned_cols=90 Identities=11% Similarity=0.111 Sum_probs=50.0
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEecCCCCCeEEEEEEccCCCeEEEEEeCCCcEEEEeCCCCCceeEEecc-----
Q 008196 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ----- 79 (574)
Q Consensus 5 DG~~LASGS~DGtVrIWDl~Tg~~l~t~~gh~~~Vvs~LafSPdGr~LLaSgS~DGtVrLWDl~~~~~ll~tl~g----- 79 (574)
+|++++ |..++-|..||..+++............+.+|....++ .+.+ |..++-|.+||..+..... ....
T Consensus 183 ~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g-~lwi-gt~~~Gl~~~~~~~~~~~~-~~~~~~~~~ 258 (795)
T 4a2l_A 183 GDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPT-RIWV-ATEGAGLFLINPKTKEIKN-YLHSPSNPK 258 (795)
T ss_dssp TTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETT-EEEE-EEBSSCEEEEETTTTEEEE-ECCCTTCTT
T ss_pred CCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCC-CEEE-EECCCCeEEEeCCCCeEEE-eecCCCCcc
Confidence 444444 55655688899876654322111122333676777776 5343 4444458889986532221 1111
Q ss_pred --CCCCeEEEEEcCCCCEEEE
Q 008196 80 --HSAPTAGISFSSDDKAVSS 98 (574)
Q Consensus 80 --H~~~VtSVaFSPDG~~LaS 98 (574)
....|.++....+|.+.+.
T Consensus 259 ~l~~~~i~~i~~d~~g~lWig 279 (795)
T 4a2l_A 259 SISSNYIRSLAMDSQNRLWIG 279 (795)
T ss_dssp SCSCSBEEEEEECTTSCEEEE
T ss_pred ccCCCeEEEEEEcCCCCEEEE
Confidence 1345999999888876654
No 482
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=40.44 E-value=1.5e+02 Score=31.97 Aligned_cols=12 Identities=33% Similarity=0.420 Sum_probs=4.6
Q ss_pred HHHHHHHHHHHH
Q 008196 556 LMKEIKSLRKEN 567 (574)
Q Consensus 556 l~~E~~~lr~en 567 (574)
|.+.|+.|..+.
T Consensus 180 l~~ki~~l~~~~ 191 (464)
T 1m1j_B 180 LHKKIQKLENAI 191 (464)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 483
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=40.40 E-value=2.1e+02 Score=34.22 Aligned_cols=64 Identities=9% Similarity=0.003 Sum_probs=40.0
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEec-CCCCCeEEEEEEccCC-----CeEEEEEeC-CCcEEEEeCCCCC
Q 008196 6 DEHLASISLSGDLILHNLASGAKAAELK-DPNEQVLRVLDYSRNS-----RHLLVTAGD-DGTLHLWDTTGRS 71 (574)
Q Consensus 6 G~~LASGS~DGtVrIWDl~Tg~~l~t~~-gh~~~Vvs~LafSPdG-----r~LLaSgS~-DGtVrLWDl~~~~ 71 (574)
+.+++.+. ++.|.++.+..+......+ .-...+ .|+++.+.+ ..+++.|++ |++|+|+++....
T Consensus 523 ~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~ev-scl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~ 593 (1158)
T 3ei3_A 523 SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEV-ACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFE 593 (1158)
T ss_dssp SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCE-EEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCC
T ss_pred CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCce-EEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCC
Confidence 34555554 5677777776553221111 123345 888987642 257888887 9999999997643
No 484
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=39.51 E-value=70 Score=26.10 Aligned_cols=20 Identities=20% Similarity=0.135 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 008196 553 QAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 553 ~~~l~~E~~~lr~en~~lr~ 572 (574)
+++|.+|+....+|+++||.
T Consensus 42 I~eLEk~L~ekd~eI~~Lqs 61 (72)
T 3nmd_A 42 IDELELELDQKDELIQMLQN 61 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444444444445544443
No 485
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1
Probab=39.36 E-value=17 Score=29.55 Aligned_cols=22 Identities=14% Similarity=0.354 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 008196 546 MSSILENQAELMKEIKSLRKEN 567 (574)
Q Consensus 546 ~~~~~~~~~~l~~E~~~lr~en 567 (574)
+..+...+.+|.+|++.||+||
T Consensus 59 I~~L~~~~~~L~~e~~~L~~~n 80 (80)
T 1hlo_A 59 IQYMRRKNHTHQQDIDDLKRQN 80 (80)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHhcC
Confidence 3445666788899999999987
No 486
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=38.62 E-value=28 Score=25.40 Aligned_cols=16 Identities=38% Similarity=0.484 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHHHH
Q 008196 552 NQAELMKEIKSLRKEN 567 (574)
Q Consensus 552 ~~~~l~~E~~~lr~en 567 (574)
+++.|..|++.|++.|
T Consensus 11 evaslenenetlkkkn 26 (49)
T 3he5_A 11 EVASLENENETLKKKN 26 (49)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHhhcccHHHHHhc
Confidence 3444444555444444
No 487
>3bbp_D GRIP and coiled-coil domain-containing protein 2; golgi complex, GRIP domain, RAB GTPase, ARL GTPase, golgin, RAB effector, clAsp protein; HET: GTP; 3.00A {Homo sapiens}
Probab=38.23 E-value=54 Score=26.57 Aligned_cols=32 Identities=25% Similarity=0.411 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 541 QMSNVMSSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 541 e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
-|.+++.+-...++.|++.|+-|+.|.-||-|
T Consensus 33 Hl~~LL~EsEatnarL~eq~~lLK~EIRRlER 64 (71)
T 3bbp_D 33 HLNGLLRETEATNAILMEQIKLLKSEIRRLER 64 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHHHHh
Confidence 36778888888899999999999999887743
No 488
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=38.07 E-value=54 Score=26.84 Aligned_cols=28 Identities=21% Similarity=0.269 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 545 VMSSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 545 ~~~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
-+..+...++.|.+|+++|++++|+...
T Consensus 51 YI~~Lq~~~~~L~~e~~~L~~~~~~~~~ 78 (82)
T 1am9_A 51 YIRFLQHSNQKLKQENLSLRTAVHKSKS 78 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 3445566677899999999999888654
No 489
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=37.95 E-value=1.7e+02 Score=24.25 Aligned_cols=30 Identities=17% Similarity=0.329 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 539 ETQMSNVMSSILENQAELMKEIKSLRKENH 568 (574)
Q Consensus 539 ~~e~~~~~~~~~~~~~~l~~E~~~lr~en~ 568 (574)
...+..-.+++.+..+.|..||++|++|-+
T Consensus 36 N~~L~~e~~e~~~~~~~L~~en~qLk~E~~ 65 (81)
T 2jee_A 36 NNSLSQEVQNAQHQREELERENNHLKEQQN 65 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 334444555666667778888888888854
No 490
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=37.94 E-value=2.1e+02 Score=25.17 Aligned_cols=26 Identities=27% Similarity=0.334 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 545 VMSSILENQAELMKEIKSLRKENHQL 570 (574)
Q Consensus 545 ~~~~~~~~~~~l~~E~~~lr~en~~l 570 (574)
.+..+...+.++..|+++.-+|.|.|
T Consensus 85 ~i~~lE~eL~~~r~em~~ql~EYq~L 110 (131)
T 3tnu_A 85 MIGSVEEQLAQLRCEMEQQNQEYKIL 110 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444444444444444444444
No 491
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=37.58 E-value=37 Score=28.44 Aligned_cols=19 Identities=11% Similarity=0.260 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 008196 554 AELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 554 ~~l~~E~~~lr~en~~lr~ 572 (574)
..|.+|+++|++|..|+|+
T Consensus 42 ~~Lq~e~~r~~e~e~r~k~ 60 (83)
T 4ath_A 42 RKLQREQQRAKDLENRQKK 60 (83)
T ss_dssp HHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444443
No 492
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=37.39 E-value=1.8e+02 Score=31.51 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=11.6
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHH
Q 008196 529 IEILRQFHMQETQMSNVMSSILEN 552 (574)
Q Consensus 529 ~e~lrqf~~~~~e~~~~~~~~~~~ 552 (574)
.|+||+=..|-++...++++|.++
T Consensus 92 ~~~lk~~~~q~~dndn~~~e~S~e 115 (491)
T 1m1j_A 92 INILKPGLEGAQQLDENYGHVSTE 115 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccchhHHHHHHHH
Confidence 355555555555444444444433
No 493
>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1
Probab=36.64 E-value=2e+02 Score=29.24 Aligned_cols=74 Identities=14% Similarity=0.271 Sum_probs=50.4
Q ss_pred chHHHHHHHHHHHHHHHHHH--HHHHHHHHHhHHHHHHHhhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 498 SNFTLQLFQRTLEETLDSFQ--KSIHEDMRNLHIEILRQFHM-----QETQMSNVMSSILENQAELMKEIKSLRKENHQL 570 (574)
Q Consensus 498 ~~~~~~~~~~~~~e~l~~~~--~~~~~d~~nlh~e~lrqf~~-----~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~l 570 (574)
..| .+-+...|+++-..+. +..+++|.++.-+++.-|+. .-.|.=..+..|.....+-.+||+.-|+.-++.
T Consensus 244 d~f-~~~m~~Fl~~a~~~~~~l~~~~~~~~~~~~~l~~yfged~~~~~~~~fF~~~~~F~~~f~~a~~en~~r~e~eek~ 322 (340)
T 1v9d_A 244 DKF-VEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKM 322 (340)
T ss_dssp CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345 3556666666544333 34577888888888888863 446788888888888888888888855555555
Q ss_pred Hh
Q 008196 571 RQ 572 (574)
Q Consensus 571 r~ 572 (574)
|+
T Consensus 323 ~~ 324 (340)
T 1v9d_A 323 RR 324 (340)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 494
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=36.32 E-value=2e+02 Score=24.37 Aligned_cols=26 Identities=12% Similarity=0.106 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 547 SSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 547 ~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
..|..++..-..|++.|++|.++||+
T Consensus 70 ~~~~~klr~Yk~dL~~lk~elk~~~~ 95 (102)
T 1vcs_A 70 GMYSNRMRSYKQEMGKLETDFKRSRI 95 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35677888889999999999999885
No 495
>3nr7_A DNA-binding protein H-NS; dimer, oligomerisation, DNA condensation; 3.70A {Salmonella enterica subsp} PDB: 1lr1_A 1ni8_A
Probab=36.24 E-value=1.1e+02 Score=25.67 Aligned_cols=54 Identities=15% Similarity=0.293 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 517 QKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 517 ~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
.+.+|+-.|.+.+|.|..... -+..++++-.++..+..+|.+.-.+..+++|.+
T Consensus 14 iR~LRA~arel~le~Lee~le---Kl~~VveERree~~~~~~~~~er~~Kl~~~~e~ 67 (86)
T 3nr7_A 14 IRTLRAQARESTLETLEEMLE---KLEVVVNERREEESAAAAEVEERTRKLQQYREM 67 (86)
T ss_dssp HHHHHHHHHTSCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888888887765443 355555555555444455554444445555543
No 496
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=36.18 E-value=21 Score=35.07 Aligned_cols=25 Identities=20% Similarity=0.315 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHh
Q 008196 548 SILENQAELMKEI-KSLRKENHQLRQ 572 (574)
Q Consensus 548 ~~~~~~~~l~~E~-~~lr~en~~lr~ 572 (574)
+|..++.-+.+|+ +++++.-+.||.
T Consensus 114 elr~~L~P~~eel~~~~~~~~eel~~ 139 (243)
T 2a01_A 114 LYRQKVEPLRAELQEGARQKLHELQE 139 (243)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4444444444444 233334444443
No 497
>3oa7_A Head morphogenesis protein, chaotic nuclear migra protein 67 fusion protein; coiled coils, structural protein, spindle POLE BODY; 2.30A {Bacillus phage PHI29}
Probab=35.58 E-value=1.1e+02 Score=29.57 Aligned_cols=48 Identities=31% Similarity=0.367 Sum_probs=30.6
Q ss_pred HHHHHHHHHhH----------HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008196 518 KSIHEDMRNLH----------IEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQ 572 (574)
Q Consensus 518 ~~~~~d~~nlh----------~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~ 572 (574)
.+-|+||-|-- -|.|.| ++.|..+++.+| .+|.+-.+.|+.||.+||-
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~a~~~s~~s~~----~dl~~s~~~l~ae~~~L~~ 65 (206)
T 3oa7_A 8 PEEHEDILNKLLDPELAQSERTEALQQ---LRVNYGSFVSEY----NDLTKSHNTLSKELDNLRS 65 (206)
T ss_dssp HHHHHHHHHHHHCTTCCHHHHHHHHHH---HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHhcCHhhhhhHHHHHHHH---HHHHHHHHHHHH----HHHHHHHHHHHhHHHHHHH
Confidence 45677776632 244444 456777777665 4577777777777777774
No 498
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=35.28 E-value=1.9e+02 Score=23.99 Aligned_cols=26 Identities=12% Similarity=0.165 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008196 541 QMSNVMSSILENQAELMKEIKSLRKE 566 (574)
Q Consensus 541 e~~~~~~~~~~~~~~l~~E~~~lr~e 566 (574)
|-..--.+++.++..|.+|++.||.+
T Consensus 49 eae~rn~eL~~e~~~l~~~~eelq~~ 74 (81)
T 1wt6_A 49 EAEARNRDLEAHVRQLQERMELLQAE 74 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 33334455555566666666666544
No 499
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Probab=35.24 E-value=20 Score=36.58 Aligned_cols=38 Identities=11% Similarity=0.111 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008196 536 HMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQL 573 (574)
Q Consensus 536 ~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~ 573 (574)
+..+..|..+++.+..+++.|.+|+++|++|.++|++.
T Consensus 170 ~e~~~~~~~~~n~~~~eie~L~~~~~~L~eEi~~Le~~ 207 (315)
T 2ve7_A 170 AELQSKLKDLFNVDAFKLESLEAKNRALNEQIARLEQE 207 (315)
T ss_dssp HHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 500
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=35.06 E-value=1.8e+02 Score=23.61 Aligned_cols=57 Identities=25% Similarity=0.294 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008196 510 EETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 574 (574)
Q Consensus 510 ~e~l~~~~~~~~~d~~nlh~e~lrqf~~~~~e~~~~~~~~~~~~~~l~~E~~~lr~en~~lr~~~ 574 (574)
++++...-...++|++.=-.||=+ +...+.--..+.+.|.+|+=.|--||.=|++.|
T Consensus 13 ~~~~~~~l~~Lr~eL~~Ke~eI~~--------L~e~i~lk~kd~ErLNDEiislNIENNlL~~rl 69 (75)
T 3a7o_A 13 DDALLNTLAILQKELKSKEQEIRR--------LKEVIALKNKNTERLNDELISGTIENNVLQQKL 69 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHhcccHHHhhHHHHHhHHHHHHHHHHH
Done!