BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008197
(574 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 163/475 (34%), Positives = 247/475 (52%), Gaps = 40/475 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY K LG G +G + DK G A+K I+K+ + S L
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD----------- 53
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
EV +L+ L H N++K Y FED Y+ ME+ GGEL D I+ ++ +++E DAAV+
Sbjct: 54 -EVAVLKQL-DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ--KFSEVDAAVI 109
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
++Q+L H H +VHRD+KPEN L +S D+ +K DFGLS + G K ++ +G+
Sbjct: 110 MKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGT 169
Query: 277 AYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336
AYY+APEVL++K + DVWS GVI YILLCG PF +T+ I K V + K F W
Sbjct: 170 AYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDW 229
Query: 337 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID----ISVLNNMRQF 392
+S+ AK VK +L +P R++A +AL+HPW+ + + L NM++F
Sbjct: 230 TQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGALGNMKKF 289
Query: 393 VKYSRLKQFALRALASTLDD-EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK 451
+L Q A+ + S L EE +L F +D + +G + +E+ + K + WK
Sbjct: 290 QSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGD 349
Query: 452 ----------ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAF 501
E+ V ILQ++D + +G +++SEFV + L + R AAF
Sbjct: 350 TVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRE------RLLAAF 403
Query: 502 EKFDIDRDGFITPEELRMHTGLKGSIDP----LLEEADIDKDGRISLSEFRRLLR 552
++FD D G IT EEL G+ D +L+E D + DG + EF +++
Sbjct: 404 QQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ 458
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 165/469 (35%), Positives = 255/469 (54%), Gaps = 42/469 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G +G + DK A+K I K V + + K++ +AV +K+
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTS----VSTSSNSKLLEEVAV------LKL 92
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L H N++K Y+ FED Y+ ME +GGEL D I+ + ++ E DAAV+++Q+L
Sbjct: 93 LD----HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVL 146
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H H +VHRD+KPEN L +S ++D+ +K DFGLS + KK ++ +G+AYY+A
Sbjct: 147 SGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIA 206
Query: 282 PEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341
PEVL++K + DVWSIGVI +ILL G PF +T+ I ++V + K F W ++S
Sbjct: 207 PEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSE 266
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI----SVLNNMRQFVKYSR 397
AKD +K++L D + R++A QAL HPW++E E I++ + + NMR+F +
Sbjct: 267 GAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQK 326
Query: 398 LKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAK---------DLP 447
L Q AL +AS L EE +L D F ID + +G + +E+ +K DLP
Sbjct: 327 LAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLP 386
Query: 448 WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 507
ES V IL A D + +G +D+SEFV + L D + ++AF+KFD D
Sbjct: 387 Q--IESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKD------KLESAFQKFDQD 438
Query: 508 RDGFITPEELRMHTGL----KGSIDPLLEEADIDKDGRISLSEFRRLLR 552
+G I+ +EL GL + ++ D + DG + EF ++++
Sbjct: 439 GNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 487
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 248/477 (51%), Gaps = 41/477 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F RY ++LG G FG + DK G AVK I K ++ + E
Sbjct: 47 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK------------E 94
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
+ REV++L+ L H N++K Y FED Y Y+ E+ GGEL D I+++K R++E DA
Sbjct: 95 SLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDA 151
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 273
A ++RQ+L H + +VHRD+KPEN L +S +D++++ DFGLS + KK +D
Sbjct: 152 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 211
Query: 274 VGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
+G+AYY+APEVL + DVWS GVI YILL G PF E I K+V + K F
Sbjct: 212 IGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL 271
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN----NM 389
W +S SAKD ++K+L P R++A AL H W++ +I +D+ L+ N+
Sbjct: 272 PQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT-YTKEQISVDVPSLDNAILNI 330
Query: 390 RQFVKYSRLKQFALRALASTLDDE-ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW 448
RQF +L Q AL + S L + E +L F +D + +G + E+ + + +
Sbjct: 331 RQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRM 390
Query: 449 KLKESRVL----------EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 498
K +++ +L ++L A+D + +G +++SEFV + L + R +
Sbjct: 391 KGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRE------RLE 444
Query: 499 AAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLL 551
AF FD D G I+ EL G+ + +L E D + DG + EF+++L
Sbjct: 445 RAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 248/477 (51%), Gaps = 41/477 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F RY ++LG G FG + DK G AVK I K ++ + E
Sbjct: 48 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK------------E 95
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
+ REV++L+ L H N++K Y FED Y Y+ E+ GGEL D I+++K R++E DA
Sbjct: 96 SLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDA 152
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 273
A ++RQ+L H + +VHRD+KPEN L +S +D++++ DFGLS + KK +D
Sbjct: 153 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 212
Query: 274 VGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
+G+AYY+APEVL + DVWS GVI YILL G PF E I K+V + K F
Sbjct: 213 IGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL 272
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN----NM 389
W +S SAKD ++K+L P R++A AL H W++ +I +D+ L+ N+
Sbjct: 273 PQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT-YTKEQISVDVPSLDNAILNI 331
Query: 390 RQFVKYSRLKQFALRALASTLDDE-ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW 448
RQF +L Q AL + S L + E +L F +D + +G + E+ + + +
Sbjct: 332 RQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRM 391
Query: 449 KLKESRVL----------EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 498
K +++ +L ++L A+D + +G +++SEFV + L + R +
Sbjct: 392 KGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRE------RLE 445
Query: 499 AAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLL 551
AF FD D G I+ EL G+ + +L E D + DG + EF+++L
Sbjct: 446 RAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 248/477 (51%), Gaps = 41/477 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F RY ++LG G FG + DK G AVK I K ++ + E
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK------------E 71
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
+ REV++L+ L H N++K Y FED Y Y+ E+ GGEL D I+++K R++E DA
Sbjct: 72 SLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDA 128
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 273
A ++RQ+L H + +VHRD+KPEN L +S +D++++ DFGLS + KK +D
Sbjct: 129 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 188
Query: 274 VGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
+G+AYY+APEVL + DVWS GVI YILL G PF E I K+V + K F
Sbjct: 189 IGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL 248
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN----NM 389
W +S SAKD ++K+L P R++A AL H W+ + +I +D+ L+ N+
Sbjct: 249 PQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI-QTYTKEQISVDVPSLDNAILNI 307
Query: 390 RQFVKYSRLKQFALRALASTLDDE-ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW 448
RQF +L Q AL + S L + E +L F +D + +G + E+ + + +
Sbjct: 308 RQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRM 367
Query: 449 KLKESRVL----------EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 498
K +++ +L ++L A+D + +G +++SEFV + L + R +
Sbjct: 368 KGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRE------RLE 421
Query: 499 AAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLL 551
AF FD D G I+ EL G+ + +L E D + DG + EF+++L
Sbjct: 422 RAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 165/492 (33%), Positives = 252/492 (51%), Gaps = 46/492 (9%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL 144
R + + F RY I +LG G FG D+ AVK I K +D
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-----AKNKDT 65
Query: 145 KMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
IL REV++L+ L H N++K + ED + YI EL GGEL D I+ +K
Sbjct: 66 STIL--------REVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK 116
Query: 205 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264
R++E DAA +++Q+ H H +VHRD+KPEN L +S ++D +K DFGLS
Sbjct: 117 --RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174
Query: 265 KPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324
+ K +D +G+AYY+APEVL+ + DVWS GVI YILL G PF+ K E I K V
Sbjct: 175 QQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR----EGGDASEIP 380
K F W +IS+ AKD ++K+L P R+TA Q L HPW++ E S++P
Sbjct: 235 ETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLP 294
Query: 381 IDISVLNNMRQFVKYSRLKQFALRALASTLDD-EELADLRDQFDAIDVDKNGSISLEEMR 439
S + N+RQF +L Q AL +AS L +E L + F +D + +G + +E+
Sbjct: 295 SLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELV 354
Query: 440 QALAKDLPWKLKESRVL-------------EILQAIDCNTDGLVDFSEFVAATLHVHQLE 486
+ + + K +S L ++ +D + G +++SEF+A+ + L
Sbjct: 355 RGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILL 414
Query: 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEEL-RMHTGLKGSI-----DPLLEEADIDKDG 540
+ R + AF+ FD D G I+ +EL ++ + SI + ++E+ D +KDG
Sbjct: 415 SRE------RMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDG 468
Query: 541 RISLSEFRRLLR 552
+ +EF +L+
Sbjct: 469 EVDFNEFVEMLQ 480
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 238/477 (49%), Gaps = 41/477 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F RY ++LG G FG + DK G AVK I K ++ + E
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK------------E 71
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
+ REV++L+ L H N+ K Y FED Y Y+ E+ GGEL D I+++K R++E DA
Sbjct: 72 SLLREVQLLKQL-DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDA 128
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 273
A ++RQ+L H + +VHRD+KPEN L +S +D++++ DFGLS + KK +D
Sbjct: 129 ARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK 188
Query: 274 VGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
+G+AYY+APEVL + DVWS GVI YILL G PF E I K+V + K F
Sbjct: 189 IGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL 248
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN----NM 389
W +S SAKD ++K L P R++A AL H W+ + +I +D+ L+ N+
Sbjct: 249 PQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWI-QTYTKEQISVDVPSLDNAILNI 307
Query: 390 RQFVKYSRLKQFALRALASTLDDE-ELADLRDQFDAIDVDKNGSISLEEMRQAL------ 442
RQF +L Q AL S L + E +L F D + +G + E+ +
Sbjct: 308 RQFQGTQKLAQAALLYXGSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRX 367
Query: 443 ----AKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 498
A L E V ++L A+D + +G +++SEFV L + R +
Sbjct: 368 KGQDASXLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRE------RLE 421
Query: 499 AAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLL 551
AF FD D G I+ EL G+ + +L E D + DG + EF++ L
Sbjct: 422 RAFRXFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXL 478
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 241 bits (614), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 249/463 (53%), Gaps = 26/463 (5%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G +G + +K A+K I+K++ + D + E++ E+ +L+
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQF--DKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+L H N++K ++ FED Y Y+ E EGGEL ++I+ + ++ E DAA +++Q+L
Sbjct: 102 SL-DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSG 158
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 283
H H +VHRD+KPEN L ++ ++K DFGLS F K +D +G+AYY+APE
Sbjct: 159 ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPE 218
Query: 284 VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 343
VLK+K + DVWS GVI YILLCG PF + + I K+V + K F W +IS+ A
Sbjct: 219 VLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEA 278
Query: 344 KDFVKKLLVKDPRARLTAAQALSHPWVREGG---DASEIPIDISVLNNMRQFVKYSRLKQ 400
K+ +K +L D R TA +AL+ W+++ + S+ L+NMR+F +L Q
Sbjct: 279 KELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQ 338
Query: 401 FALRALASTLDD-EELADLRDQFDAIDVDKNGSISLEEMRQA--LAKDLPWKLKESRVLE 457
A+ + S L EE +L D F +D + +G + +E+ + + ++ +L E + +E
Sbjct: 339 AAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVE 398
Query: 458 -----ILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFI 512
IL+ +D + +G +++SEF++ + L + R + AF FD D+ G I
Sbjct: 399 EEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEE------RLRRAFNLFDTDKSGKI 452
Query: 513 TPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLL 551
T EEL GL + + +L EAD +KD I EF ++
Sbjct: 453 TKEELANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMM 495
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 477
LR F+ D DK+G I+ EE+ + E ++L D N D ++DF EFV+
Sbjct: 437 LRRAFNLFDTDKSGKITKEELANLFG---LTSISEKTWNDVLGEADQNKDNMIDFDEFVS 493
Query: 478 ATLHVHQLEEHDS 490
+H++ +H +
Sbjct: 494 M---MHKICDHKT 503
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 160/280 (57%), Gaps = 24/280 (8%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D ++ YT+ +G G +G +A K R A KKI K V
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK------------------YFV 64
Query: 153 EDV---KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
EDV K+E++I+++L H N+++ Y FED+ +Y+ MELC GGEL +R++ K+ R
Sbjct: 65 EDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFR-- 121
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E DAA +++ +L A CH + HRD+KPENFLF + DS LK DFGL+ KPGK
Sbjct: 122 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
+ VG+ YYV+P+VL+ GPE D WS GV+ Y+LLCG PF T+ + ++
Sbjct: 182 MRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTF 241
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
F K W ++S A+ +++LL K P+ R+T+ QAL H W
Sbjct: 242 TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEW 281
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 160/280 (57%), Gaps = 24/280 (8%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D ++ YT+ +G G +G +A K R A KKI K V
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK------------------YFV 47
Query: 153 EDV---KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
EDV K+E++I+++L H N+++ Y FED+ +Y+ MELC GGEL +R++ K+ R
Sbjct: 48 EDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFR-- 104
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E DAA +++ +L A CH + HRD+KPENFLF + DS LK DFGL+ KPGK
Sbjct: 105 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164
Query: 270 FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
+ VG+ YYV+P+VL+ GPE D WS GV+ Y+LLCG PF T+ + ++
Sbjct: 165 MRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTF 224
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
F K W ++S A+ +++LL K P+ R+T+ QAL H W
Sbjct: 225 TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEW 264
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/317 (38%), Positives = 176/317 (55%), Gaps = 20/317 (6%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+D + + + LG G F +A +KA G AVK I K + + S
Sbjct: 18 EDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESS----------- 66
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
++ E+ +L+ + HEN+V + +E N++Y+ M+L GGEL DRI+ K YTEK
Sbjct: 67 ---IENEIAVLRKIK-HENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEK--GFYTEK 120
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
DA+ ++RQ+L H G+VHRD+KPEN L+ S E+S + +DFGLS G
Sbjct: 121 DASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMS 180
Query: 272 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
G+ YVAPEVL +K ++ D WSIGVI YILLCG PF+D+ + +F+++L+ + +
Sbjct: 181 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYE 240
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMR 390
F W IS+SAKDF++ L+ KDP R T QA HPW+ G A I SV +R
Sbjct: 241 FDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWI-AGDTALNKNIHESVSAQIR 299
Query: 391 QFVKYSRLKQFALRALA 407
+ S+ +Q A A A
Sbjct: 300 KNFAKSKWRQ-AFNATA 315
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 157/288 (54%), Gaps = 16/288 (5%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL 144
R + + F RY I +LG G FG D+ AVK I K +D
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-----AKNKDT 65
Query: 145 KMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
IL REV++L+ L H N++K + ED + YI EL GGEL D I+ +K
Sbjct: 66 STIL--------REVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK 116
Query: 205 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264
R++E DAA +++Q+ H H +VHRD+KPEN L +S ++D +K DFGLS
Sbjct: 117 --RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174
Query: 265 KPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324
+ K +D +G+AYY+APEVL+ + DVWS GVI YILL G PF+ K E I K V
Sbjct: 175 QQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
K F W +IS+ AKD ++K+L P R+TA Q L HPW+++
Sbjct: 235 ETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 157/288 (54%), Gaps = 16/288 (5%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL 144
R + + F RY I +LG G FG D+ AVK I K +D
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-----AKNKDT 65
Query: 145 KMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
IL REV++L+ L H N++K + ED + YI EL GGEL D I+ +K
Sbjct: 66 STIL--------REVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK 116
Query: 205 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264
R++E DAA +++Q+ H H +VHRD+KPEN L +S ++D +K DFGLS
Sbjct: 117 --RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174
Query: 265 KPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324
+ K +D +G+AYY+APEVL+ + DVWS GVI YILL G PF+ K E I K V
Sbjct: 175 QQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
K F W +IS+ AKD ++K+L P R+TA Q L HPW+++
Sbjct: 235 ETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/281 (39%), Positives = 160/281 (56%), Gaps = 15/281 (5%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
Y + RY K LG G +G + DK G A+K I+K+ + S L
Sbjct: 15 YFQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD---- 70
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
EV +L+ L H N++K Y FED Y+ ME+ GGEL D I+ ++ +++
Sbjct: 71 --------EVAVLKQL-DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ--KFS 119
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E DAAV+++Q+L H H +VHRD+KPEN L +S D+ +K DFGLS + G K
Sbjct: 120 EVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK 179
Query: 270 FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++ +G+AYY+APEVL++K + DVWS GVI YILLCG PF +T+ I K V + K
Sbjct: 180 MKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKF 239
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
F W +S+ AK VK +L +P R++A +AL+HPW+
Sbjct: 240 SFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 158/278 (56%), Gaps = 15/278 (5%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F RY ++LG G FG + DK G AVK I K ++ + E
Sbjct: 30 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK------------E 77
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
+ REV++L+ L H N++K Y FED Y Y+ E+ GGEL D I+++K R++E DA
Sbjct: 78 SLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDA 134
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 273
A ++RQ+L H + +VHRD+KPEN L +S +D++++ DFGLS + KK +D
Sbjct: 135 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 194
Query: 274 VGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
+G+AYY+APEVL + DVWS GVI YILL G PF E I K+V + K F
Sbjct: 195 IGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL 254
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
W +S SAKD ++K+L P R++A AL H W++
Sbjct: 255 PQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 162/276 (58%), Gaps = 20/276 (7%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+ + ++LG G F ++ + G A+K I+K+ +F+D +
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP------AFRD---------SSL 53
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+ E+ +L+ + HEN+V + +E + Y+ M+L GGEL DRIL + YTEKDA++
Sbjct: 54 ENEIAVLKKIK-HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILER--GVYTEKDASL 110
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
V++Q+L H +G+VHRD+KPEN L+ + +E+S + TDFGLS + G G
Sbjct: 111 VIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI-MSTACG 169
Query: 276 SAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
+ YVAPEVL +K ++ D WSIGVITYILLCG PF+++TE +F+++ +F
Sbjct: 170 TPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESP 229
Query: 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
W IS SAKDF+ LL KDP R T +ALSHPW+
Sbjct: 230 FWDDISESAKDFICHLLEKDPNERYTCEKALSHPWI 265
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 171/311 (54%), Gaps = 20/311 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y +LG G F +A DK VA+K I K + + S ++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMEN-------------- 65
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E+ +L + H N+V + +E ++Y+ M+L GGEL DRI+ K YTE+DA+ ++
Sbjct: 66 EIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLI 122
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
Q+L H G+VHRD+KPEN L+ S EDS + +DFGLS PG G+
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 278 YYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336
YVAPEVL +K ++ D WSIGVI YILLCG PF+D+ + +F+++L+ + +F W
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
Query: 337 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYS 396
IS+SAKDF++ L+ KDP R T QAL HPW+ G A + I SV +++ S
Sbjct: 243 DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI-AGDTALDKNIHQSVSEQIKKNFAKS 301
Query: 397 RLKQFALRALA 407
+ KQ A A A
Sbjct: 302 KWKQ-AFNATA 311
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 171/311 (54%), Gaps = 20/311 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y +LG G F +A DK VA+K I K + + S ++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN-------------- 65
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E+ +L + H N+V + +E ++Y+ M+L GGEL DRI+ K YTE+DA+ ++
Sbjct: 66 EIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLI 122
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
Q+L H G+VHRD+KPEN L+ S EDS + +DFGLS PG G+
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 278 YYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336
YVAPEVL +K ++ D WSIGVI YILLCG PF+D+ + +F+++L+ + +F W
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
Query: 337 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYS 396
IS+SAKDF++ L+ KDP R T QAL HPW+ G A + I SV +++ S
Sbjct: 243 DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKS 301
Query: 397 RLKQFALRALA 407
+ KQ A A A
Sbjct: 302 KWKQ-AFNATA 311
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 171/311 (54%), Gaps = 20/311 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y +LG G F +A DK VA+K I K + + S ++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN-------------- 65
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E+ +L + H N+V + +E ++Y+ M+L GGEL DRI+ K YTE+DA+ ++
Sbjct: 66 EIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLI 122
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
Q+L H G+VHRD+KPEN L+ S EDS + +DFGLS PG G+
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 278 YYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336
YVAPEVL +K ++ D WSIGVI YILLCG PF+D+ + +F+++L+ + +F W
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
Query: 337 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYS 396
IS+SAKDF++ L+ KDP R T QAL HPW+ G A + I SV +++ S
Sbjct: 243 DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI-AGDTALDKNIHQSVSEQIKKNFAKS 301
Query: 397 RLKQFALRALA 407
+ KQ A A A
Sbjct: 302 KWKQ-AFNATA 311
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 158/281 (56%), Gaps = 20/281 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y +LG G F +A DK VA+K I K + + S ++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN-------------- 65
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E+ +L + H N+V + +E ++Y+ M+L GGEL DRI+ K YTE+DA+ ++
Sbjct: 66 EIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLI 122
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
Q+L H G+VHRD+KPEN L+ S EDS + +DFGLS PG G+
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 278 YYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336
YVAPEVL +K ++ D WSIGVI YILLCG PF+D+ + +F+++L+ + +F W
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
Query: 337 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377
IS+SAKDF++ L+ KDP R T QAL HPW+ GD +
Sbjct: 243 DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI--AGDTA 281
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 156/257 (60%), Gaps = 7/257 (2%)
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
V+ E+ +L L+ H N++K FE + + +EL GGEL DRI+ K Y+E+DAA
Sbjct: 95 VRTEIGVLLRLS-HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEK--GYYSERDAA 151
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 274
V+Q+L A H +G+VHRD+KPEN L+ + D+ LK DFGLS ++ + +
Sbjct: 152 DAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVC 211
Query: 275 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPDFR 332
G+ Y APE+L+ + GPE D+WS+G+ITYILLCG PF+D+ D +F+ +L + F
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFI 271
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQF 392
W +S +AKD V+KL+V DP+ RLT QAL HPWV G A+ + +D + +++F
Sbjct: 272 SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV-TGKAANFVHMD-TAQKKLQEF 329
Query: 393 VKYSRLKQFALRALAST 409
+LK +AS+
Sbjct: 330 NARRKLKAAVKAVVASS 346
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 159/291 (54%), Gaps = 18/291 (6%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL 144
R + + D + + LG G FG ++ ++++G +K I K++
Sbjct: 11 RENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS---------- 60
Query: 145 KMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK- 203
+ +E ++ E+++L++L H N++K + FED + +YI ME CEGGELL+RI++
Sbjct: 61 ----QVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQ 115
Query: 204 -KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 262
+ +E A +++QM+ A H +VH+D+KPEN LF+ S +K DFGL++
Sbjct: 116 ARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175
Query: 263 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 322
K + + G+A Y+APEV KR + D+WS GV+ Y LL G PF + + + +
Sbjct: 176 LFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ 235
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373
+ +P++ + P ++ A D +K++L KDP R +AAQ L H W ++
Sbjct: 236 KATYKEPNYAVECRP-LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 152/288 (52%), Gaps = 16/288 (5%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
Y K Y + K LG G G +A ++ +VA+K I K K I D +
Sbjct: 10 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--- 66
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
+V+ E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R
Sbjct: 67 ----NVETEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLK 118
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E + QML H +G++HRD+KPEN L S +ED +K TDFG S +
Sbjct: 119 EATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 178
Query: 270 FQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEV 324
+ + G+ Y+APEVL D WS+GVI +I L G PF + +T+ + ++
Sbjct: 179 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 238
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
K +F + W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 239 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 152/288 (52%), Gaps = 16/288 (5%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
Y K Y + K LG G G +A ++ +VA+K I K K I D +
Sbjct: 3 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--- 59
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
+V+ E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R
Sbjct: 60 ----NVETEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLK 111
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E + QML H +G++HRD+KPEN L S +ED +K TDFG S +
Sbjct: 112 EATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 171
Query: 270 FQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEV 324
+ + G+ Y+APEVL D WS+GVI +I L G PF + +T+ + ++
Sbjct: 172 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 231
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
K +F + W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 232 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 152/288 (52%), Gaps = 16/288 (5%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
Y K Y + K LG G G +A ++ +VA+K I K K I D +
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--- 60
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
+V+ E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R
Sbjct: 61 ----NVETEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLK 112
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E + QML H +G++HRD+KPEN L S +ED +K TDFG S +
Sbjct: 113 EATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 270 FQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEV 324
+ + G+ Y+APEVL D WS+GVI +I L G PF + +T+ + ++
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
K +F + W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 233 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 152/288 (52%), Gaps = 16/288 (5%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
Y K Y + K LG G G +A ++ +VA+K I K K I D +
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--- 60
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
+V+ E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R
Sbjct: 61 ----NVETEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLK 112
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E + QML H +G++HRD+KPEN L S +ED +K TDFG S +
Sbjct: 113 EATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 270 FQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEV 324
+ + G+ Y+APEVL D WS+GVI +I L G PF + +T+ + ++
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
K +F + W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 233 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 152/288 (52%), Gaps = 16/288 (5%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
Y K Y + K LG G G +A ++ +VA+K I K K I D +
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--- 60
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
+V+ E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R
Sbjct: 61 ----NVETEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLK 112
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E + QML H +G++HRD+KPEN L S +ED +K TDFG S +
Sbjct: 113 EATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 270 FQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEV 324
+ + G+ Y+APEVL D WS+GVI +I L G PF + +T+ + ++
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
K +F + W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 233 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 169/314 (53%), Gaps = 18/314 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + + LG G F G A K I K+ R + ++R
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR-------------DHQKLER 52
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E +I + L H N+V+ +++ ++ + Y+ +L GGEL + I+A++ Y+E DA+ +
Sbjct: 53 EARICRLLK-HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--YYSEADASHCI 109
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGS 276
+Q+L CHL+G+VHRD+KPEN L S + +++K DFGL+ ++ ++ + G+
Sbjct: 110 QQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y++PEVL++ G D+W+ GVI YILL G PFWD+ + +++++ DF
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPE 229
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKY 395
W +++ AKD + K+L +P R+TA++AL HPW+ + + + ++ +++F
Sbjct: 230 WDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNAR 289
Query: 396 SRLKQFALRALAST 409
+LK L + +T
Sbjct: 290 RKLKGAILTTMLAT 303
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 161/298 (54%), Gaps = 21/298 (7%)
Query: 77 TGVIPCGKRTDFGYDKD--FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKI 134
TG G+ ++F + F Y + + LG G F K G A K I K+
Sbjct: 8 TGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL 67
Query: 135 LIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGG 194
R FQ L+ RE +I + L H N+V+ +++ +++++ Y+ +L GG
Sbjct: 68 SAR--DFQKLE-----------REARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGG 113
Query: 195 ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254
EL + I+A++ Y+E DA+ ++Q+L A CH +G+VHR++KPEN L S + +++K
Sbjct: 114 ELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK 171
Query: 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPF 312
DFGL+ + + + G+ Y++PEVLK+ S P D+W+ GVI YILL G PF
Sbjct: 172 LADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPF 230
Query: 313 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
WD+ + ++ ++ D+ W +++ AK + +L +P+ R+TA QAL PW+
Sbjct: 231 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 167/311 (53%), Gaps = 18/311 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + + LG G F G A K I K+ R + ++R
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR-------------DHQKLER 52
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E +I + L H N+V+ +++ ++ + Y+ +L GGEL + I+A++ Y+E DA+ +
Sbjct: 53 EARICRLLK-HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--YYSEADASHCI 109
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGS 276
+Q+L CHL+G+VHRD+KPEN L S + +++K DFGL+ ++ ++ + G+
Sbjct: 110 QQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y++PEVL++ G D+W+ GVI YILL G PFWD+ + +++++ DF
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPE 229
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKY 395
W +++ AKD + K+L +P R+TA++AL HPW+ + + + ++ +++F
Sbjct: 230 WDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNAR 289
Query: 396 SRLKQFALRAL 406
+LK L +
Sbjct: 290 RKLKGAILTTM 300
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 152/288 (52%), Gaps = 16/288 (5%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
Y K Y + K LG G G +A ++ +VA++ I K K I D +
Sbjct: 143 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL--- 199
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
+V+ E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R
Sbjct: 200 ----NVETEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLK 251
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E + QML H +G++HRD+KPEN L S +ED +K TDFG S +
Sbjct: 252 EATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 311
Query: 270 FQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEV 324
+ + G+ Y+APEVL D WS+GVI +I L G PF + +T+ + ++
Sbjct: 312 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 371
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
K +F + W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 372 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 152/288 (52%), Gaps = 16/288 (5%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
Y K Y + K LG G G +A ++ +VA++ I K K I D +
Sbjct: 129 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL--- 185
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
+V+ E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R
Sbjct: 186 ----NVETEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLK 237
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E + QML H +G++HRD+KPEN L S +ED +K TDFG S +
Sbjct: 238 EATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 297
Query: 270 FQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEV 324
+ + G+ Y+APEVL D WS+GVI +I L G PF + +T+ + ++
Sbjct: 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 357
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
K +F + W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 358 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 157/276 (56%), Gaps = 14/276 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y +G+ LG GQF K G A K I+K R+ S + ++ E+++R
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKR----RLSSSRR-----GVSREEIER 57
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV IL+ + H N++ ++ FE+ V + +EL GGEL D LA+K+S TE +A +
Sbjct: 58 EVNILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFD-FLAEKES-LTEDEATQFL 114
Query: 218 RQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q+L H + H D+KPEN L + +K DFG++ I+ G +F++I G+
Sbjct: 115 KQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT 174
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
+VAPE++ + G E+D+WSIGVITYILL G PF +T+ + DF +
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEY 234
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ + S AKDF+++LLVKDP+ R+T AQ+L H W++
Sbjct: 235 FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 153/279 (54%), Gaps = 19/279 (6%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F Y + + LG G F K G A K I K+ R FQ L+
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR--DFQKLE-------- 53
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
RE +I + L H N+V+ +++ +++++ Y+ +L GGEL + I+A++ Y+E DA
Sbjct: 54 ---REARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADA 107
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 273
+ ++Q+L A CH +G+VHR++KPEN L S + +++K DFGL+ + + +
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 167
Query: 274 VGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
G+ Y++PEVLK+ S P D+W+ GVI YILL G PFWD+ + ++ ++ D+
Sbjct: 168 AGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
W +++ AK + +L +P+ R+TA QAL PW+
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 153/279 (54%), Gaps = 19/279 (6%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F Y + + LG G F K G A K I K+ R FQ L+
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR--DFQKLE-------- 52
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
RE +I + L H N+V+ +++ +++++ Y+ +L GGEL + I+A++ Y+E DA
Sbjct: 53 ---REARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADA 106
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 273
+ ++Q+L A CH +G+VHR++KPEN L S + +++K DFGL+ + + +
Sbjct: 107 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 166
Query: 274 VGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
G+ Y++PEVLK+ S P D+W+ GVI YILL G PFWD+ + ++ ++ D+
Sbjct: 167 AGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 225
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
W +++ AK + +L +P+ R+TA QAL PW+
Sbjct: 226 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 153/279 (54%), Gaps = 19/279 (6%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F Y + + LG G F K G A K I K+ R FQ L+
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR--DFQKLE-------- 53
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
RE +I + L H N+V+ +++ +++++ Y+ +L GGEL + I+A++ Y+E DA
Sbjct: 54 ---REARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADA 107
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 273
+ ++Q+L A CH +G+VHR++KPEN L S + +++K DFGL+ + + +
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 167
Query: 274 VGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
G+ Y++PEVLK+ S P D+W+ GVI YILL G PFWD+ + ++ ++ D+
Sbjct: 168 AGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
W +++ AK + +L +P+ R+TA QAL PW+
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 159/282 (56%), Gaps = 14/282 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+D + Y +G+ LG GQF K G A K I+K R+ S + ++
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKR----RLSSSRR-----GVS 58
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
E+++REV IL+ + H N++ ++ FE+ V + +EL GGEL D LA+K+S TE
Sbjct: 59 REEIEREVNILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFD-FLAEKES-LTED 115
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+A ++Q+L H + H D+KPEN L + +K DFG++ I+ G +F
Sbjct: 116 EATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 175
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF +T+ +
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY 235
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
DF + + + S AKDF+++LLVKDP+ R+ AQ+L H W++
Sbjct: 236 DFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 171/318 (53%), Gaps = 17/318 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y IG+ LG GQF +K+ G A K I+K Q ++ E+++R
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKR---------QSRASRRGVSREEIER 64
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV IL+ + H NV+ ++ +E+ V + +EL GGEL D LA+K+S +E++A +
Sbjct: 65 EVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKES-LSEEEATSFI 121
Query: 218 RQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q+L H + H D+KPEN L +K DFGL+ I+ G +F++I G+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
+VAPE++ + G E+D+WSIGVITYILL G PF T+ + DF +
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF 241
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN--NMR-QF 392
+ S AKDF++KLLVK+ R RLT +AL HPW+ + + SV+N N R Q+
Sbjct: 242 FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQY 301
Query: 393 VKYSRLKQFALRALASTL 410
V+ F++ +L + L
Sbjct: 302 VRRRSKLAFSIVSLCNHL 319
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 171/318 (53%), Gaps = 17/318 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y IG+ LG GQF +K+ G A K I+K Q ++ E+++R
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKR---------QSRASRRGVSREEIER 64
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV IL+ + H NV+ ++ +E+ V + +EL GGEL D LA+K+S +E++A +
Sbjct: 65 EVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKES-LSEEEATSFI 121
Query: 218 RQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q+L H + H D+KPEN L +K DFGL+ I+ G +F++I G+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
+VAPE++ + G E+D+WSIGVITYILL G PF T+ + DF +
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEF 241
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN--NMR-QF 392
+ S AKDF++KLLVK+ R RLT +AL HPW+ + + SV+N N R Q+
Sbjct: 242 FSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQY 301
Query: 393 VKYSRLKQFALRALASTL 410
V+ F++ +L + L
Sbjct: 302 VRRRSKLAFSIVSLCNHL 319
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 156/276 (56%), Gaps = 14/276 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y +G+ LG GQF K G A K I+K R+ S + ++ E+++R
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKR----RLXSSRR-----GVSREEIER 78
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV IL+ + H N++ ++ FE+ V + +EL GGEL D LA+K+S TE +A +
Sbjct: 79 EVNILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFD-FLAEKES-LTEDEATQFL 135
Query: 218 RQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q+L H + H D+KPEN L + +K DFG++ I+ G +F++I G+
Sbjct: 136 KQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT 195
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
+VAPE++ + G E+D+WSIGVITYILL G PF +T+ + DF +
Sbjct: 196 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEY 255
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ + S AKDF+++LLVKDP+ R+ AQ+L H W++
Sbjct: 256 FSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 171/318 (53%), Gaps = 17/318 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y IG+ LG GQF +K+ G A K I+K Q ++ E+++R
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKR---------QSRASRRGVSREEIER 64
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV IL+ + H NV+ ++ +E+ V + +EL GGEL D LA+K+S +E++A +
Sbjct: 65 EVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKES-LSEEEATSFI 121
Query: 218 RQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q+L H + H D+KPEN L +K DFGL+ I+ G +F++I G+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
+VAPE++ + G E+D+WSIGVITYILL G PF T+ + DF +
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF 241
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN--NMR-QF 392
+ S AKDF++KLLVK+ R RLT +AL HPW+ + + SV+N N R Q+
Sbjct: 242 FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQY 301
Query: 393 VKYSRLKQFALRALASTL 410
V+ F++ +L + L
Sbjct: 302 VRRRWKLSFSIVSLCNHL 319
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 171/318 (53%), Gaps = 17/318 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y IG+ LG GQF +K+ G A K I+K Q ++ E+++R
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKR---------QSRASRRGVSREEIER 64
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV IL+ + H NV+ ++ +E+ V + +EL GGEL D LA+K+S +E++A +
Sbjct: 65 EVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKES-LSEEEATSFI 121
Query: 218 RQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q+L H + H D+KPEN L +K DFGL+ I+ G +F++I G+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
+VAPE++ + G E+D+WSIGVITYILL G PF T+ + DF +
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEF 241
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN--NMR-QF 392
+ S AKDF++KLLVK+ R RLT +AL HPW+ + + SV+N N R Q+
Sbjct: 242 FSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQY 301
Query: 393 VKYSRLKQFALRALASTL 410
V+ F++ +L + L
Sbjct: 302 VRRRWKLDFSIVSLCNHL 319
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 152/279 (54%), Gaps = 18/279 (6%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F Y + + LG G F G A K I K+ R +
Sbjct: 20 FQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSAR-------------DHQ 66
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++RE +I + L H N+V+ +++ ++ + Y+ +L GGEL + I+A++ Y+E DA
Sbjct: 67 KLEREARICRLLK-HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE--YYSEADA 123
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQD 272
+ ++Q+L CH G+VHRD+KPEN L S + +++K DFGL+ ++ ++ +
Sbjct: 124 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 183
Query: 273 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
G+ Y++PEVL++ G D+W+ GVI YILL G PFWD+ + +++++ DF
Sbjct: 184 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 243
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
W +++ AKD + K+L +P R+TAA+AL HPW+
Sbjct: 244 PSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 167/307 (54%), Gaps = 15/307 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ D Y G+ LG GQF +K+ G + A K I+K R S + ++
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKR----RTKSSRR-----GVS 57
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
ED++REV IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE+
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEE 114
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+A ++Q+L H + H D+KPEN L +K DFGL+ I G +F
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ V
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNM 389
+F + + + S AKDF+++LLVKDP+ R+T +L HPW++ + S + NM
Sbjct: 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAV-NM 293
Query: 390 RQFVKYS 396
+F K++
Sbjct: 294 EKFKKFA 300
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 151/275 (54%), Gaps = 14/275 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y IG+ LG GQF +K+ G A K I+K Q + E+++R
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKR---------QSRASRRGVCREEIER 64
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV IL+ + H N++ ++ +E+ V + +EL GGEL D LA+K+S +E++A +
Sbjct: 65 EVSILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFD-FLAQKES-LSEEEATSFI 121
Query: 218 RQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q+L H + H D+KPEN L +K DFGL+ I+ G +F++I G+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
+VAPE++ + G E+D+WSIGVITYILL G PF T+ + DF +
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEF 241
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
+ S AKDF++KLLVK+ R RLT +AL HPW+
Sbjct: 242 FSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 152/275 (55%), Gaps = 14/275 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y IG+ LG GQF +K+ G A K I+K Q ++ E+++R
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKR---------QSRASRRGVSREEIER 64
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV IL+ + H NV+ ++ +E+ V + +EL GGEL D LA+K+S +E++A +
Sbjct: 65 EVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKES-LSEEEATSFI 121
Query: 218 RQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q+L H + H D+KPEN L +K DFGL+ I+ G +F++I G+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
+VAPE++ + G E+D+WSIGVITYILL G PF T+ + DF +
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF 241
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
+ S AKDF++KLLVK+ R RLT +AL HPW+
Sbjct: 242 FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 164/316 (51%), Gaps = 19/316 (6%)
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
++L Q + T + + P + D+ K+F ++Y ++G G +A
Sbjct: 59 KKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRAT 118
Query: 121 GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 180
G AVK +E + ++++ E +RE IL+ +AGH +++ +++E
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVR-------EATRRETHILRQVAGHPHIITLIDSYES 171
Query: 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 240
+++++ +L GEL D + K +EK+ ++R +L + H + +VHRD+KPE
Sbjct: 172 SSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPE 229
Query: 241 NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-------GPES 293
N L ++ ++ +DFG S ++PG+K +++ G+ Y+APE+LK G E
Sbjct: 230 NILLD---DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEV 286
Query: 294 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 353
D+W+ GVI + LL G PFW + + + + ++ + F W S++ KD + +LL
Sbjct: 287 DLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQV 346
Query: 354 DPRARLTAAQALSHPW 369
DP ARLTA QAL HP+
Sbjct: 347 DPEARLTAEQALQHPF 362
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 157/282 (55%), Gaps = 14/282 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ D Y G+ LG GQF +K+ G + A K I+K R S + ++
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKR----RTKSSRR-----GVS 57
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
ED++REV IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE+
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEE 114
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+A ++Q+L H + H D+KPEN L +K DFGL+ I G +F
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ V
Sbjct: 175 KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 157/282 (55%), Gaps = 14/282 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ D Y G+ LG GQF +K+ G + A K I+K R S + ++
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKR----RTKSSRR-----GVS 57
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
ED++REV IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE+
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEE 114
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+A ++Q+L H + H D+KPEN L +K DFGL+ I G +F
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ V
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 176/344 (51%), Gaps = 24/344 (6%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F Y + + LG G F G A I K+ R +
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR-------------DHQ 55
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++RE +I + L H N+V+ +++ ++ + Y+ +L GGEL + I+A++ Y+E DA
Sbjct: 56 KLEREARICRLLK-HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE--YYSEADA 112
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQD 272
+ ++Q+L CH G+VHR++KPEN L S + +++K DFGL+ ++ ++ +
Sbjct: 113 SHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 172
Query: 273 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
G+ Y++PEVL++ G D+W+ GVI YILL G PFWD+ + +++++ DF
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 232
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQ 391
W +++ AKD + K+L +P R+TAA+AL HPW+ + ++ +++
Sbjct: 233 PSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKK 292
Query: 392 FVKYSRLKQFALRALAST----LDDEELADLRDQFDAIDVDKNG 431
F +LK L + +T + +E+ + +Q I+ NG
Sbjct: 293 FNARRKLKGAILTVMLATRNFSVRKQEIIKVTEQL--IEAISNG 334
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 157/282 (55%), Gaps = 14/282 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ D Y G+ LG GQF +K+ G + A K I+K R S + ++
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKR----RTKSSRR-----GVS 57
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
ED++REV IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE+
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEE 114
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+A ++Q+L H + H D+KPEN L +K DFGL+ I G +F
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ V
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 157/282 (55%), Gaps = 14/282 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ D Y G+ LG GQF +K+ G + A K I+K R S + ++
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKR----RTKSSRR-----GVS 56
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
ED++REV IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE+
Sbjct: 57 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEE 113
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+A ++Q+L H + H D+KPEN L +K DFGL+ I G +F
Sbjct: 114 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 173
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ V
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 233
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 234 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 157/282 (55%), Gaps = 14/282 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ D Y G+ LG GQF +K+ G + A K I+K R S + ++
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKR----RTKSSRR-----GVS 57
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
ED++REV IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE+
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEE 114
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+A ++Q+L H + H D+KPEN L +K DFGL+ I G +F
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ V
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 157/282 (55%), Gaps = 14/282 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ D Y G+ LG GQF +K+ G + A K I+K R S + ++
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKR----RTKSSRR-----GVS 57
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
ED++REV IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE+
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEE 114
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+A ++Q+L H + H D+KPEN L +K DFGL+ I G +F
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ V
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 157/282 (55%), Gaps = 14/282 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ D Y G+ LG GQF +K+ G + A K I+K R S + ++
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKR----RTKSSRR-----GVS 57
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
ED++REV IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE+
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEE 114
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+A ++Q+L H + H D+KPEN L +K DFGL+ I G +F
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ V
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 157/282 (55%), Gaps = 14/282 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ D Y G+ LG GQF +K+ G + A K I+K R S + ++
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKR----RTKSSRR-----GVS 56
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
ED++REV IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE+
Sbjct: 57 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEE 113
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+A ++Q+L H + H D+KPEN L +K DFGL+ I G +F
Sbjct: 114 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 173
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ V
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 233
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 234 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 157/282 (55%), Gaps = 14/282 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ D Y G+ LG GQF +K+ G + A K I+K R S + ++
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKR----RTKSSRR-----GVS 57
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
ED++REV IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE+
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEE 114
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+A ++Q+L H + H D+KPEN L +K DFGL+ I G +F
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ V
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 157/282 (55%), Gaps = 14/282 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ D Y G+ LG GQF +K+ G + A K I+K R S + ++
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKR----RTKSSRR-----GVS 57
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
ED++REV IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE+
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEE 114
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+A ++Q+L H + H D+KPEN L +K DFGL+ I G +F
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ V
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 163/304 (53%), Gaps = 18/304 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + + +G G F G A K I K+ R + ++R
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSAR-------------DHQKLER 52
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E +I + L H N+V+ +++ ++ + Y+ +L GGEL + I+A++ Y+E DA+ +
Sbjct: 53 EARICRLLK-HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--YYSEADASHCI 109
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGS 276
+Q+L CH G+VHRD+KPEN L S + +++K DFGL+ ++ ++ + G+
Sbjct: 110 QQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y++PEVL++++ G D+W+ GVI YILL G PFWD+ + +++++ DF
Sbjct: 170 PGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPE 229
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKY 395
W +++ AK+ + ++L +P R+TA +AL HPWV + + + + +++F
Sbjct: 230 WDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNAR 289
Query: 396 SRLK 399
+LK
Sbjct: 290 RKLK 293
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 154/287 (53%), Gaps = 22/287 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y I + LG G FG + T++A G+ A K + + + K E V++
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFV--------MTPHESDK-------ETVRK 97
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E++ + L H +V ++AFEDDN + + E GGEL +++ A + ++ +E +A +
Sbjct: 98 EIQTMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYM 155
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
RQ+ + H + VH D+KPEN +F + K + LK DFGL+ + P + + G+A
Sbjct: 156 RQVCKGLCHMHENNYVHLDLKPENIMF-TTKRSNELKLIDFGLTAHLDPKQSVKVTTGTA 214
Query: 278 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336
+ APEV + K G +D+WS+GV++YILL G PF + +D + V + +
Sbjct: 215 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF 274
Query: 337 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG---GDASEIP 380
IS KDF++KLL+ DP R+T QAL HPW+ G G S+IP
Sbjct: 275 SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 321
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 157/282 (55%), Gaps = 14/282 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ D Y G+ LG G+F +K+ G + A K I+K R S + ++
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKR----RTKSSRR-----GVS 57
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
ED++REV IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE+
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEE 114
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+A ++Q+L H + H D+KPEN L +K DFGL+ I G +F
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ V
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 156/282 (55%), Gaps = 14/282 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ D Y G+ LG GQF +K+ G + A K I+K R S + ++
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKR----RTKSSRR-----GVS 57
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
ED++REV IL+ + H NV+ + +E+ V + EL GGEL D LA+K+S TE+
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILIGELVAGGELFD-FLAEKES-LTEE 114
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+A ++Q+L H + H D+KPEN L +K DFGL+ I G +F
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ V
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 154/287 (53%), Gaps = 22/287 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y I + LG G FG + T++A G+ A K + + + K E V++
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFV--------MTPHESDK-------ETVRK 203
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E++ + L H +V ++AFEDDN + + E GGEL +++ A + ++ +E +A +
Sbjct: 204 EIQTMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYM 261
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
RQ+ + H + VH D+KPEN +F + K + LK DFGL+ + P + + G+A
Sbjct: 262 RQVCKGLCHMHENNYVHLDLKPENIMF-TTKRSNELKLIDFGLTAHLDPKQSVKVTTGTA 320
Query: 278 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336
+ APEV + K G +D+WS+GV++YILL G PF + +D + V + +
Sbjct: 321 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF 380
Query: 337 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG---GDASEIP 380
IS KDF++KLL+ DP R+T QAL HPW+ G G S+IP
Sbjct: 381 SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 427
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 173/328 (52%), Gaps = 28/328 (8%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D F+ Y + +++G G F ++ G + AVK ++ V F +
Sbjct: 19 DVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVK-------IVDVAKFTSSP---GL 68
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR--Y 208
+ ED+KRE I L H ++V+ + D +Y+ E +G +L I+ + D+ Y
Sbjct: 69 STEDLKREASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY 127
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL------SD 262
+E A+ +RQ+L CH + ++HRD+KPEN L S + + +K DFG+ S
Sbjct: 128 SEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG 187
Query: 263 FIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIF 321
+ G+ VG+ +++APEV+KR+ G DVW GVI +ILL G PF+ T++ +F
Sbjct: 188 LVAGGR-----VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLF 241
Query: 322 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
+ +++ K + W IS SAKD V+++L+ DP R+T +AL+HPW++E D I
Sbjct: 242 EGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE-RDRYAYKI 300
Query: 382 DI-SVLNNMRQFVKYSRLKQFALRALAS 408
+ + +R+F +LK L A++S
Sbjct: 301 HLPETVEQLRKFNARRKLKGAVLAAVSS 328
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 156/282 (55%), Gaps = 14/282 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ D Y G+ LG G F +K+ G + A K I+K R S + ++
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKR----RTKSSRR-----GVS 57
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
ED++REV IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE+
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEE 114
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+A ++Q+L H + H D+KPEN L +K DFGL+ I G +F
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ V
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 158/288 (54%), Gaps = 31/288 (10%)
Query: 92 KDFD---RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
KD+D + Y + + +G G F +A G+ VA+K ++KN L L
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNT----------LGSDL 52
Query: 149 PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRY 208
P +K E++ L+ L H+++ + Y+ E N +++ +E C GGEL D I+++ R
Sbjct: 53 P----RIKTEIEALKNLR-HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ--DRL 105
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
+E++ VV RQ++ A H G HRD+KPEN LF E LK DFGL K K
Sbjct: 106 SEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD---EYHKLKLIDFGLCAKPKGNK 162
Query: 269 KF--QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324
+ Q GS Y APE+++ KS G E+DVWS+G++ Y+L+CG PF D ++K++
Sbjct: 163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKI 222
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+R K D + W +S S+ ++++L DP+ R++ L+HPW+ +
Sbjct: 223 MRGKYDVPK--W--LSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 162/315 (51%), Gaps = 18/315 (5%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F Y + + LG G F K A K I K+ R +
Sbjct: 29 FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSAR-------------DHQ 75
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++RE +I + L H N+V+ +++ ++ + Y+ +L GGEL + I+A++ Y+E DA
Sbjct: 76 KLEREARICRLLK-HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--YYSEADA 132
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQD 272
+ + Q+L H H +VHRD+KPEN L S + +++K DFGL+ ++ ++ +
Sbjct: 133 SHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG 192
Query: 273 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
G+ Y++PEVL++ G D+W+ GVI YILL G PFWD+ + +++++ DF
Sbjct: 193 FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDF 252
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQ 391
W +++ AK+ + ++L +P R+TA QAL HPWV + + + + +R+
Sbjct: 253 PSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRK 312
Query: 392 FVKYSRLKQFALRAL 406
F +LK L +
Sbjct: 313 FNARRKLKGAILTTM 327
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 158/300 (52%), Gaps = 23/300 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y I + LG G FG + +KA G RV V K + P+ VK
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATG-RVFVAKF--------------INTPYPLDKYTVKN 97
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E+ I+ L H ++ ++AFED + + +E GGEL DRI A +D + +E + +
Sbjct: 98 EISIMNQLH-HPKLINLHDAFEDKYEMVLILEFLSGGELFDRI-AAEDYKMSEAEVINYM 155
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
RQ H H +VH D+KPEN + ++ K+ SS+K DFGL+ + P + + +A
Sbjct: 156 RQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKLNPDEIVKVTTATA 214
Query: 278 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336
+ APE++ R+ G +D+W+IGV+ Y+LL G PF + + + V R +F +
Sbjct: 215 EFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAF 274
Query: 337 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP--IDISVLNNMRQFVK 394
S+S AKDF+K LL K+PR RLT AL HPW++ GD S + I S N +RQ +K
Sbjct: 275 SSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK--GDHSNLTSRIPSSRYNKIRQKIK 332
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 177/343 (51%), Gaps = 30/343 (8%)
Query: 76 QTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKIL 135
+G++P G D D F+ Y + +++G G F ++ G + AVK +
Sbjct: 8 SSGLVPRGSMAD--DDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVK-------I 58
Query: 136 IRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 195
+ V F ++ ED+KRE I L H ++V+ + D +Y+ E +G +
Sbjct: 59 VDVAKFTSSP---GLSTEDLKREASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGAD 114
Query: 196 LLDRILAKKDSR--YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
L I+ + D+ Y+E A+ +RQ+L CH + ++HRD+KP L S + + +
Sbjct: 115 LCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPV 174
Query: 254 KATDFGL------SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL 306
K FG+ S + G+ VG+ +++APEV+KR+ G DVW GVI +ILL
Sbjct: 175 KLGGFGVAIQLGESGLVAGGR-----VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILL 229
Query: 307 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366
G PF+ T++ +F+ +++ K + W IS SAKD V+++L+ DP R+T +AL+
Sbjct: 230 SGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 288
Query: 367 HPWVREGGDASEIPIDIS-VLNNMRQFVKYSRLKQFALRALAS 408
HPW++E D I + + +R+F +LK L A++S
Sbjct: 289 HPWLKE-RDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVSS 330
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/315 (33%), Positives = 154/315 (48%), Gaps = 49/315 (15%)
Query: 94 FDRRYTI-GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
F+ Y + +LLG G + A NG AVK IEK R F
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVF----------- 58
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
REV+ L G++N+++ FEDD Y+ E +GG +L I +K + E++
Sbjct: 59 ----REVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHI--QKQKHFNERE 112
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
A+ VVR + H G+ HRD+KPEN L +S ++ S +K DF L +K
Sbjct: 113 ASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTP 172
Query: 273 I--------VGSAYYVAPEVLKRKSGPES------DVWSIGVITYILLCGRRPF------ 312
I GSA Y+APEV++ + + D+WS+GV+ YI+L G PF
Sbjct: 173 ITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGA 232
Query: 313 ---WDKTE------DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 363
WD+ E + +F+ + K +F K W IS+ AKD + KLLV+D + RL+AAQ
Sbjct: 233 DCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQ 292
Query: 364 ALSHPWVREGGDASE 378
L HPWV+ G A E
Sbjct: 293 VLQHPWVQ--GQAPE 305
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 170/328 (51%), Gaps = 28/328 (8%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D F+ Y + +++G G F ++ G + AVK ++ V F +
Sbjct: 19 DVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVK-------IVDVAKFTSSP---GL 68
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR--Y 208
+ ED+KRE I L H ++V+ + D +Y+ E +G +L I+ + D+ Y
Sbjct: 69 STEDLKREASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY 127
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL------SD 262
+E A+ +RQ+L CH + ++HRD+KP L S + + +K FG+ S
Sbjct: 128 SEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 187
Query: 263 FIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIF 321
+ G+ VG+ +++APEV+KR+ G DVW GVI +ILL G PF+ T++ +F
Sbjct: 188 LVAGGR-----VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLF 241
Query: 322 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
+ +++ K + W IS SAKD V+++L+ DP R+T +AL+HPW++E D I
Sbjct: 242 EGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE-RDRYAYKI 300
Query: 382 DIS-VLNNMRQFVKYSRLKQFALRALAS 408
+ + +R+F +LK L A++S
Sbjct: 301 HLPETVEQLRKFNARRKLKGAVLAAVSS 328
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
E +EV IL+ ++GH N+++ + +E + + ++ +L + GEL D + K +EK+
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKE 125
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
++R +L V H +VHRD+KPEN L +D ++K TDFG S + PG+K ++
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGEKLRE 182
Query: 273 IVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325
+ G+ Y+APE+++ G E D+WS GVI Y LL G PFW + + + + ++
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 242
Query: 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
F W S++ KD V + LV P+ R TA +AL+HP+ ++
Sbjct: 243 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
E +EV IL+ ++GH N+++ + +E + + ++ +L + GEL D + K +EK+
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKE 112
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
++R +L V H +VHRD+KPEN L +D ++K TDFG S + PG+K ++
Sbjct: 113 TRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGEKLRE 169
Query: 273 IVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325
+ G+ Y+APE+++ G E D+WS GVI Y LL G PFW + + + + ++
Sbjct: 170 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 229
Query: 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
F W S++ KD V + LV P+ R TA +AL+HP+ ++
Sbjct: 230 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 153/281 (54%), Gaps = 27/281 (9%)
Query: 98 YTIGK--LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
YT+ K +LG G+FG + + A G ++A K +I+ +D E+V
Sbjct: 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAK-------IIKTRGMKD--------KEEV 133
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRY--TEKDA 213
K E+ ++ L H N+++ Y+AFE N + + ME +GGEL DRI+ D Y TE D
Sbjct: 134 KNEISVMNQL-DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRII---DESYNLTELDT 189
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 273
+ ++Q+ H ++H D+KPEN L + ++ +K DFGL+ KP +K +
Sbjct: 190 ILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLARRYKPREKLKVN 248
Query: 274 VGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
G+ ++APEV+ S P +D+WS+GVI Y+LL G PF + +L + D
Sbjct: 249 FGTPEFLAPEVVNYDFVSFP-TDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDL 307
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ + IS AK+F+ KLL+K+ R++A++AL HPW+ +
Sbjct: 308 EDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 127/227 (55%), Gaps = 12/227 (5%)
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
E +EV IL+ ++GH N+++ + +E + + ++ +L + GEL D + K +EK+
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKE 125
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
++R +L V H +VHRD+KPEN L +D ++K TDFG S + PG+K +
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGEKLRS 182
Query: 273 IVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325
+ G+ Y+APE+++ G E D+WS GVI Y LL G PFW + + + + ++
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 242
Query: 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
F W S++ KD V + LV P+ R TA +AL+HP+ ++
Sbjct: 243 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 147/276 (53%), Gaps = 25/276 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ +G LLG G F Y A G VA+K I+K M V+ V+
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKA------------MYKAGMVQRVQN 60
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EVKI L H ++++ YN FED NYVY+ +E+C GE ++R L + ++E +A +
Sbjct: 61 EVKIHCQLK-HPSILELYNYFEDSNYVYLVLEMCHNGE-MNRYLKNRVKPFSENEARHFM 118
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGS 276
Q++ H HG++HRD+ N L + ++K DFGL+ +K P +K + G+
Sbjct: 119 HQIITGMLYLHSHGILHRDLTLSNLLL---TRNMNIKIADFGLATQLKMPHEKHYTLCGT 175
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRNKPDFRRK 334
Y++PE+ R + G ESDVWS+G + Y LL GR PF D ++ + K VL D+
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL---ADYEMP 232
Query: 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
+ SI AKD + +LL ++P RL+ + L HP++
Sbjct: 233 SFLSI--EAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 145/301 (48%), Gaps = 31/301 (10%)
Query: 78 GVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR 137
G++P G + F Y + + +G G + KA AVK I+K+K
Sbjct: 13 GLVPRGSHMNL----VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK---- 64
Query: 138 VVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL 197
D E++IL H N++ + ++D +VY+ EL GGELL
Sbjct: 65 ---------------RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELL 109
Query: 198 DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF-KSAKEDSSLKAT 256
D+IL +K ++E++A+ V+ + + H G+VHRD+KP N L+ + L+
Sbjct: 110 DKILRQK--FFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRIC 167
Query: 257 DFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWD 314
DFG + ++ +A +VAPEVLKR+ E D+WS+G++ Y +L G PF +
Sbjct: 168 DFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
Query: 315 KTEDG---IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
D I + K W ++S +AKD V K+L DP RLTA Q L HPWV
Sbjct: 228 GPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVT 287
Query: 372 E 372
+
Sbjct: 288 Q 288
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 141/283 (49%), Gaps = 27/283 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F Y + + +G G + KA AVK I+K+K
Sbjct: 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------------------R 60
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
D E++IL H N++ + ++D YVY+ EL +GGELLD+IL +K ++E++A
Sbjct: 61 DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK--FFSEREA 118
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLF-KSAKEDSSLKATDFGLSDFIKP-GKKFQ 271
+ V+ + + H G+VHRD+KP N L+ + S++ DFG + ++
Sbjct: 119 SAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM 178
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW---DKTEDGIFKEVLRN 327
+A +VAPEVL+R+ D+WS+GV+ Y +L G PF D T + I +
Sbjct: 179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSG 238
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
K W S+S++AKD V K+L DP RLTAA L HPW+
Sbjct: 239 KFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 139/285 (48%), Gaps = 27/285 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F Y + + +G G + KA AVK I+K+K
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------------------R 65
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
D E++IL H N++ + ++D +VY+ EL GGELLD+IL +K ++E++A
Sbjct: 66 DPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK--FFSEREA 123
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLF-KSAKEDSSLKATDFGLSDFIKP-GKKFQ 271
+ V+ + + H G+VHRD+KP N L+ + L+ DFG + ++
Sbjct: 124 SFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLM 183
Query: 272 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDG---IFKEVLRN 327
+A +VAPEVLKR+ E D+WS+G++ Y +L G PF + D I +
Sbjct: 184 TPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSG 243
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
K W ++S +AKD V K+L DP RLTA Q L HPWV +
Sbjct: 244 KFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 122/229 (53%), Gaps = 18/229 (7%)
Query: 166 AGHENVVKFYNAFEDDNY----VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
+G ++V + +E+ ++ + I ME EGGEL RI + D +TE++AA ++R +
Sbjct: 79 SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIG 138
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H H + HRD+KPEN L+ S ++D+ LK TDFG + Q + YYVA
Sbjct: 139 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT-QNALQTPCYTPYYVA 197
Query: 282 PEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVLRNKPDFR 332
PEVL GPE D+WS+GVI YILLCG PF+ T G+ + + + F
Sbjct: 198 PEVL----GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFP 253
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
W +S AK ++ LL DP RLT Q ++HPW+ + + P+
Sbjct: 254 NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 302
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 122/229 (53%), Gaps = 18/229 (7%)
Query: 166 AGHENVVKFYNAFEDDNY----VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
+G ++V + +E+ ++ + I ME EGGEL RI + D +TE++AA ++R +
Sbjct: 60 SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIG 119
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H H + HRD+KPEN L+ S ++D+ LK TDFG + Q + YYVA
Sbjct: 120 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT-QNALQTPCYTPYYVA 178
Query: 282 PEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVLRNKPDFR 332
PEVL GPE D+WS+GVI YILLCG PF+ T G+ + + + F
Sbjct: 179 PEVL----GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFP 234
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
W +S AK ++ LL DP RLT Q ++HPW+ + + P+
Sbjct: 235 NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 283
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 139/283 (49%), Gaps = 27/283 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F Y + + +G G + KA AVK I+K+K
Sbjct: 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK-------------------R 60
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
D E++IL H N++ + ++D YVY+ EL +GGELLD+IL +K ++E++A
Sbjct: 61 DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK--FFSEREA 118
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLF-KSAKEDSSLKATDFGLSDFIKPGKKFQD 272
+ V+ + + H G+VHRD+KP N L+ + S++ DFG + ++
Sbjct: 119 SAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLX 178
Query: 273 I-VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW---DKTEDGIFKEVLRN 327
+A +VAPEVL+R+ D+WS+GV+ Y L G PF D T + I +
Sbjct: 179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSG 238
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
K W S+S++AKD V K L DP RLTAA L HPW+
Sbjct: 239 KFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 143/284 (50%), Gaps = 25/284 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K +G G F +A G VA+K I+K ++ P +++ + R
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-------------PTSLQKLFR 60
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I++ L H N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 61 EVRIMKIL-NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKF 117
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K GS
Sbjct: 118 RQIVSAVQYCHQKRIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTVGGKLDTFCGSP 174
Query: 278 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K R P
Sbjct: 175 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIP 231
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ +S ++ +K+ LV +P R T Q + W+ G + E+
Sbjct: 232 F-YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 274
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 145/303 (47%), Gaps = 32/303 (10%)
Query: 91 DKDFDRRYTIG---KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMI 147
D F + Y + K LG G F K + AVK I K
Sbjct: 3 DSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--------------- 47
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ ++E+ L+ GH N+VK + F D + ++ MEL GGEL +RI KK
Sbjct: 48 ---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERI--KKKKH 102
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP- 266
++E +A+ ++R+++ + H G+VHRD+KPEN LF ++ +K DFG + P
Sbjct: 103 FSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162
Query: 267 GKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWD-------KTED 318
+ + + +Y APE+L + ES D+WS+GVI Y +L G+ PF +
Sbjct: 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAV 222
Query: 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
I K++ + F + W ++S AKD ++ LL DP RL + + W+++G S
Sbjct: 223 EIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSS 282
Query: 379 IPI 381
P+
Sbjct: 283 NPL 285
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 149/330 (45%), Gaps = 60/330 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
+ ++Y + +G G +G VA + A+K + KNKI + I P V
Sbjct: 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKI----------RQINPKDV 72
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
E +K EV++++ L H N+ + Y +ED+ Y+ + MELC GG LLD++ D T K
Sbjct: 73 ERIKTEVRLMKKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDS-TGKC 130
Query: 213 AAVVVRQMLRVAAEC---------------------------------------HLHGLV 233
A VV+ + EC H G+
Sbjct: 131 AMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGIC 190
Query: 234 HRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKK----FQDIVGSAYYVAPEVLKRK 288
HRD+KPENFLF S + +K DFGLS +F K G+ Y+VAPEVL
Sbjct: 191 HRDIKPENFLF-STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT 249
Query: 289 S---GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 345
+ GP+ D WS GV+ ++LL G PF + +VL K F + +S A+D
Sbjct: 250 NESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARD 309
Query: 346 FVKKLLVKDPRARLTAAQALSHPWVREGGD 375
+ LL ++ R A +AL HPW+ + D
Sbjct: 310 LLSNLLNRNVDERFDAMRALQHPWISQFSD 339
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 145/277 (52%), Gaps = 31/277 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y I + LG G FG +AT +VA+K I + +++ D+ M V+R
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISR-----QLLKKSDMHM-------RVER 58
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E+ L+ L H +++K Y+ + + +E GGEL D I+ KK R TE +
Sbjct: 59 EISYLKLLR-HPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKK--RMTEDEGRRFF 114
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
+Q++ CH H +VHRD+KPEN L ++ ++K DFGLS+ + G + GS
Sbjct: 115 QQIICAIEYCHRHKIVHRDLKPENLLLD---DNLNVKIADFGLSNIMTDGNFLKTSCGSP 171
Query: 278 YYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFR 332
Y APEV+ K +GPE DVWS G++ Y++L GR PF D+ +FK+V + PDF
Sbjct: 172 NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF- 230
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
+S A+ +++++V DP R+T + PW
Sbjct: 231 ------LSPGAQSLIRRMIVADPMQRITIQEIRRDPW 261
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 143/284 (50%), Gaps = 25/284 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K +G G F +A G VA+K I+K ++ P +++ + R
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-------------PTSLQKLFR 63
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I++ L H N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 64 EVRIMKIL-NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKF 120
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K G+
Sbjct: 121 RQIVSAVQYCHQKRIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTVGGKLDAFCGAP 177
Query: 278 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K R P
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIP 234
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ +S ++ +K+ LV +P R T Q + W+ G + E+
Sbjct: 235 F-YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 277
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 142/284 (50%), Gaps = 25/284 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K +G G F +A G VAV+ I+K ++ S Q L R
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL--NSSSLQKLF-----------R 62
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I++ L H N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 63 EVRIMKVL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKF 119
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K + GS
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDEFCGSP 176
Query: 278 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K R P
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIP 233
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ +S ++ +KK L+ +P R T Q + W+ G + E+
Sbjct: 234 F-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 141/284 (49%), Gaps = 25/284 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K +G G F +A G VAVK I+K ++ S Q L R
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL--NSSSLQKLF-----------R 62
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I++ L H N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 63 EVRIMKVL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKF 119
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K GS
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFCGSP 176
Query: 278 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K R P
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIP 233
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ +S ++ +KK L+ +P R T Q + W+ G + E+
Sbjct: 234 F-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 141/284 (49%), Gaps = 25/284 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K +G G F +A G VAVK I+K ++ S Q L R
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL--NSSSLQKLF-----------R 62
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I++ L H N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 63 EVRIMKVL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKF 119
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K GS
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFCGSP 176
Query: 278 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K R P
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIP 233
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ +S ++ +KK L+ +P R T Q + W+ G + E+
Sbjct: 234 F-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 145/297 (48%), Gaps = 30/297 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y +G LG G FG V + G +VAVK + + KI R + V ++R
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI--RSLD----------VVGKIRR 65
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E++ L+ L H +++K Y + +++ ME GGEL D I K+ R EK++ +
Sbjct: 66 EIQNLK-LFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYIC--KNGRLDEKESRRLF 122
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
+Q+L CH H +VHRD+KPEN L + + K DFGLS+ + G+ + GS
Sbjct: 123 QQILSGVDYCHRHMVVHRDLKPENVLLDA---HMNAKIADFGLSNMMSDGEFLRXSCGSP 179
Query: 278 YYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFR 332
Y APEV+ + +GPE D+WS GVI Y LLCG PF D +FK++ + P +
Sbjct: 180 NYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQY- 238
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNM 389
++ S +K +L DP R T H W ++ P D S + M
Sbjct: 239 ------LNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTM 289
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 141/284 (49%), Gaps = 25/284 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K +G G F +A G VAV+ I+K ++ S Q L R
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL--NSSSLQKLF-----------R 62
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I++ L H N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 63 EVRIMKVL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKF 119
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K GS
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFCGSP 176
Query: 278 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K R P
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIP 233
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ +S ++ +KK L+ +P R T Q + W+ G + E+
Sbjct: 234 F-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 145/307 (47%), Gaps = 46/307 (14%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
+LG G + AVK IEK IR F REV++L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVF---------------REVEML 64
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
GH NV++ FE+++ Y+ E GG +L I K + E +A+VVV+ +
Sbjct: 65 YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHI--HKRRHFNELEASVVVQDVAS 122
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--------V 274
H G+ HRD+KPEN L + + S +K DFGL IK I
Sbjct: 123 ALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC 182
Query: 275 GSAYYVAPEVLKRKSGPES------DVWSIGVITYILLCGRRPF---------WDKTE-- 317
GSA Y+APEV++ S S D+WS+GVI YILL G PF WD+ E
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 318 ----DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373
+ +F+ + K +F K W IS +AKD + KLLV+D + RL+AAQ L HPWV+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC 302
Query: 374 GDASEIP 380
+ +P
Sbjct: 303 APENTLP 309
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 141/284 (49%), Gaps = 25/284 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K +G G F +A G VAVK I+K ++ S Q L R
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL--NSSSLQKLF-----------R 62
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I++ L H N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 63 EVRIMKVL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKF 119
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K G+
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDAFCGAP 176
Query: 278 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K R P
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIP 233
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ +S ++ +KK L+ +P R T Q + W+ G + E+
Sbjct: 234 F-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 139/280 (49%), Gaps = 30/280 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y +G LG G FG + + G +VAVK + + KI + L + V +KR
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI-------RSLDV-----VGKIKR 60
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E++ L+ L H +++K Y ++ ME GGEL D I K R E +A +
Sbjct: 61 EIQNLK-LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC--KHGRVEEMEARRLF 117
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
+Q+L CH H +VHRD+KPEN L + + K DFGLS+ + G+ +D GS
Sbjct: 118 QQILSAVDYCHRHMVVHRDLKPENVLLDA---HMNAKIADFGLSNMMSDGEFLRDSCGSP 174
Query: 278 YYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFR 332
Y APEV+ + +GPE D+WS GVI Y LLCG PF D+ +FK++ + P++
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY- 233
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
++ S + +L DP R T H W ++
Sbjct: 234 ------LNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 141/284 (49%), Gaps = 25/284 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K +G G F +A G VAVK I+K ++ S Q L R
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL--NSSSLQKLF-----------R 55
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I++ L H N+VK + E + +Y+ ME GGE+ D ++A + EK+A
Sbjct: 56 EVRIMKVL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMK--EKEARAKF 112
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K GS
Sbjct: 113 RQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFCGSP 169
Query: 278 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K R P
Sbjct: 170 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIP 226
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ +S ++ +KK L+ +P R T Q + W+ G + E+
Sbjct: 227 F-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 269
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 144/307 (46%), Gaps = 46/307 (14%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
+LG G + AVK IEK IR F REV++L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVF---------------REVEML 64
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
GH NV++ FE+++ Y+ E GG +L I K + E +A+VVV+ +
Sbjct: 65 YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHI--HKRRHFNELEASVVVQDVAS 122
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--------V 274
H G+ HRD+KPEN L + + S +K DF L IK I
Sbjct: 123 ALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC 182
Query: 275 GSAYYVAPEVLKRKSGPES------DVWSIGVITYILLCGRRPF---------WDKTE-- 317
GSA Y+APEV++ S S D+WS+GVI YILL G PF WD+ E
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 318 ----DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373
+ +F+ + K +F K W IS +AKD + KLLV+D + RL+AAQ L HPWV+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC 302
Query: 374 GDASEIP 380
+ +P
Sbjct: 303 APENTLP 309
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 146/279 (52%), Gaps = 31/279 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y I K LG G FG +A G +VA+K I K +V++ D++ ++R
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-----KVLAKSDMQ-------GRIER 63
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E+ L+ L H +++K Y+ + + + + +E G EL D I+ + + +E++A
Sbjct: 64 EISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR--DKMSEQEARRFF 119
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
+Q++ CH H +VHRD+KPEN L E ++K DFGLS+ + G + GS
Sbjct: 120 QQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDGNFLKTSCGSP 176
Query: 278 YYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFR 332
Y APEV+ K +GPE DVWS GVI Y++LC R PF D++ +FK + + P F
Sbjct: 177 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF- 235
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+S A +K++L+ +P R++ + + W +
Sbjct: 236 ------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 146/279 (52%), Gaps = 31/279 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y I K LG G FG +A G +VA+K I K +V++ D++ ++R
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-----KVLAKSDMQ-------GRIER 62
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E+ L+ L H +++K Y+ + + + + +E G EL D I+ + + +E++A
Sbjct: 63 EISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR--DKMSEQEARRFF 118
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
+Q++ CH H +VHRD+KPEN L E ++K DFGLS+ + G + GS
Sbjct: 119 QQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDGNFLKTSCGSP 175
Query: 278 YYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFR 332
Y APEV+ K +GPE DVWS GVI Y++LC R PF D++ +FK + + P F
Sbjct: 176 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF- 234
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+S A +K++L+ +P R++ + + W +
Sbjct: 235 ------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 150/291 (51%), Gaps = 31/291 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y I K LG G FG +A G +VA+K I K +V++ D++ ++R
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-----KVLAKSDMQ-------GRIER 53
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E+ L+ L H +++K Y+ + + + + +E G EL D I+ + + +E++A
Sbjct: 54 EISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR--DKMSEQEARRFF 109
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
+Q++ CH H +VHRD+KPEN L E ++K DFGLS+ + G + GS
Sbjct: 110 QQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDGNFLKTSCGSP 166
Query: 278 YYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFR 332
Y APEV+ K +GPE DVWS GVI Y++LC R PF D++ +FK + + P F
Sbjct: 167 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF- 225
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI 383
+S A +K++L+ +P R++ + + W + +P D+
Sbjct: 226 ------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYLLPPDL 270
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 146/279 (52%), Gaps = 31/279 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y I K LG G FG +A G +VA+K I K +V++ D++ ++R
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-----KVLAKSDMQ-------GRIER 57
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E+ L+ L H +++K Y+ + + + + +E G EL D I+ + + +E++A
Sbjct: 58 EISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR--DKMSEQEARRFF 113
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
+Q++ CH H +VHRD+KPEN L E ++K DFGLS+ + G + GS
Sbjct: 114 QQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDGNFLKTSCGSP 170
Query: 278 YYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFR 332
Y APEV+ K +GPE DVWS GVI Y++LC R PF D++ +FK + + P F
Sbjct: 171 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF- 229
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+S A +K++L+ +P R++ + + W +
Sbjct: 230 ------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 138/280 (49%), Gaps = 30/280 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y +G LG G FG + + G +VAVK + + KI + L + V +KR
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI-------RSLDV-----VGKIKR 60
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E++ L+ L H +++K Y ++ ME GGEL D I K R E +A +
Sbjct: 61 EIQNLK-LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC--KHGRVEEMEARRLF 117
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
+Q+L CH H +VHRD+KPEN L + + K DFGLS+ + G+ + GS
Sbjct: 118 QQILSAVDYCHRHMVVHRDLKPENVLLDA---HMNAKIADFGLSNMMSDGEFLRTSCGSP 174
Query: 278 YYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFR 332
Y APEV+ + +GPE D+WS GVI Y LLCG PF D+ +FK++ + P++
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY- 233
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
++ S + +L DP R T H W ++
Sbjct: 234 ------LNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 141/283 (49%), Gaps = 20/283 (7%)
Query: 156 KREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+REV++ + ++V+ + +E+ + I ME +GGEL RI + D +TE+
Sbjct: 108 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 167
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 168 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 227
Query: 272 DIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFK 322
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+
Sbjct: 228 TPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 283
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
+ + +F W +S K ++ LL +P R+T + ++HPW+ + + P+
Sbjct: 284 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH 343
Query: 383 IS-VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDA 424
S VL ++ ++ +K+ ALA+ D E ++ DA
Sbjct: 344 TSRVLKEDKE--RWEDVKEEMTSALATMRVDYEQIKIKKIEDA 384
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 141/283 (49%), Gaps = 20/283 (7%)
Query: 156 KREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+REV++ + ++V+ + +E+ + I ME +GGEL RI + D +TE+
Sbjct: 58 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 117
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 118 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 177
Query: 272 DIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFK 322
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+
Sbjct: 178 TPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 233
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
+ + +F W +S K ++ LL +P R+T + ++HPW+ + + P+
Sbjct: 234 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH 293
Query: 383 IS-VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDA 424
S VL ++ ++ +K+ ALA+ D E ++ DA
Sbjct: 294 TSRVLKEDKE--RWEDVKEEMTSALATMRVDYEQIKIKKIEDA 334
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 141/283 (49%), Gaps = 20/283 (7%)
Query: 156 KREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+REV++ + ++V+ + +E+ + I ME +GGEL RI + D +TE+
Sbjct: 102 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 161
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 162 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 221
Query: 272 DIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFK 322
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+
Sbjct: 222 TPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 277
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
+ + +F W +S K ++ LL +P R+T + ++HPW+ + + P+
Sbjct: 278 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH 337
Query: 383 IS-VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDA 424
S VL ++ ++ +K+ ALA+ D E ++ DA
Sbjct: 338 TSRVLKEDKE--RWEDVKEEMTSALATMRVDYEQIKIKKIEDA 378
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 123/242 (50%), Gaps = 17/242 (7%)
Query: 156 KREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+REV++ + ++V+ + +E+ + I ME +GGEL RI + D +TE+
Sbjct: 56 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 115
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 116 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 175
Query: 272 DIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFK 322
+ + YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+
Sbjct: 176 EPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 231
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
+ + +F W +S K ++ LL +P R+T + ++HPW+ + + P+
Sbjct: 232 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH 291
Query: 383 IS 384
S
Sbjct: 292 TS 293
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 137/273 (50%), Gaps = 20/273 (7%)
Query: 156 KREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+REV++ + ++V+ + +E+ + I ME +GGEL RI + D +TE+
Sbjct: 58 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 117
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 118 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 177
Query: 272 DIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFK 322
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+
Sbjct: 178 TPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 233
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
+ + +F W +S K ++ LL +P R+T + ++HPW+ + + P+
Sbjct: 234 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH 293
Query: 383 IS-VLNNMRQFVKYSRLKQFALRALASTLDDEE 414
S VL ++ ++ +K+ ALA+ D E
Sbjct: 294 TSRVLKEDKE--RWEDVKEEMTSALATMRVDYE 324
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 17/242 (7%)
Query: 156 KREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+REV++ + ++V+ + +E+ + I ME +GGEL RI + D +TE+
Sbjct: 56 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 115
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 116 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 175
Query: 272 DIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFK 322
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+
Sbjct: 176 TPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 231
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
+ + +F W +S K ++ LL +P R+T + ++HPW+ + + P+
Sbjct: 232 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH 291
Query: 383 IS 384
S
Sbjct: 292 TS 293
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 17/242 (7%)
Query: 156 KREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+REV++ + ++V+ + +E+ + I ME +GGEL RI + D +TE+
Sbjct: 62 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 121
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 122 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 181
Query: 272 DIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFK 322
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+
Sbjct: 182 TPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 237
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
+ + +F W +S K ++ LL +P R+T + ++HPW+ + + P+
Sbjct: 238 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH 297
Query: 383 IS 384
S
Sbjct: 298 TS 299
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 17/242 (7%)
Query: 156 KREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+REV++ + ++V+ + +E+ + I ME +GGEL RI + D +TE+
Sbjct: 57 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 116
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 117 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 176
Query: 272 DIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFK 322
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+
Sbjct: 177 TPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 232
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
+ + +F W +S K ++ LL +P R+T + ++HPW+ + + P+
Sbjct: 233 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH 292
Query: 383 IS 384
S
Sbjct: 293 TS 294
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 17/242 (7%)
Query: 156 KREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+REV++ + ++V+ + +E+ + I ME +GGEL RI + D +TE+
Sbjct: 63 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 122
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 123 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 182
Query: 272 DIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFK 322
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+
Sbjct: 183 TPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 238
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
+ + +F W +S K ++ LL +P R+T + ++HPW+ + + P+
Sbjct: 239 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH 298
Query: 383 IS 384
S
Sbjct: 299 TS 300
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 17/242 (7%)
Query: 156 KREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+REV++ + ++V+ + +E+ + I ME +GGEL RI + D +TE+
Sbjct: 64 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 123
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 124 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 183
Query: 272 DIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFK 322
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+
Sbjct: 184 TPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 239
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
+ + +F W +S K ++ LL +P R+T + ++HPW+ + + P+
Sbjct: 240 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH 299
Query: 383 IS 384
S
Sbjct: 300 TS 301
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 17/242 (7%)
Query: 156 KREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+REV++ + ++V+ + +E+ + I ME +GGEL RI + D +TE+
Sbjct: 72 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 131
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 132 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 191
Query: 272 DIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFK 322
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+
Sbjct: 192 TPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 247
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
+ + +F W +S K ++ LL +P R+T + ++HPW+ + + P+
Sbjct: 248 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH 307
Query: 383 IS 384
S
Sbjct: 308 TS 309
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 148/278 (53%), Gaps = 25/278 (8%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G G +AT +++G VAVKK++ K R + F ++ + + D +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEV-----VIMRDYQ------- 206
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
HENVV+ YN++ + +++ ME EGG L D + +R E+ A V +L+
Sbjct: 207 ----HENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQA 259
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAP 282
+ H G++HRD+K ++ L D +K +DFG + K + + +VG+ Y++AP
Sbjct: 260 LSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 316
Query: 283 EVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341
E++ R GPE D+WS+G++ ++ G P++++ K + N P R K +S
Sbjct: 317 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSP 375
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
S K F+ +LLV+DP R TAA+ L HP++ + G + I
Sbjct: 376 SLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASI 413
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 151/281 (53%), Gaps = 26/281 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G G +AT +++G VAVKK++ K R + F ++ + + D +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEV-----VIMRDYQ------- 84
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
HENVV+ YN++ + +++ ME EGG L D + +R E+ A V +L+
Sbjct: 85 ----HENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQA 137
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAP 282
+ H G++HRD+K ++ L D +K +DFG + K + + +VG+ Y++AP
Sbjct: 138 LSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 194
Query: 283 EVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341
E++ R GPE D+WS+G++ ++ G P++++ K + N P R K +S
Sbjct: 195 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSP 253
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWV-REGGDASEIPI 381
S K F+ +LLV+DP R TAA+ L HP++ + G AS +P+
Sbjct: 254 SLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPL 294
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 151/281 (53%), Gaps = 26/281 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G G +AT +++G VAVKK++ K R + F ++ + + D +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEV-----VIMRDYQ------- 86
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
HENVV+ YN++ + +++ ME EGG L D + +R E+ A V +L+
Sbjct: 87 ----HENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQA 139
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAP 282
+ H G++HRD+K ++ L D +K +DFG + K + + +VG+ Y++AP
Sbjct: 140 LSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 196
Query: 283 EVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341
E++ R GPE D+WS+G++ ++ G P++++ K + N P R K +S
Sbjct: 197 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSP 255
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWV-REGGDASEIPI 381
S K F+ +LLV+DP R TAA+ L HP++ + G AS +P+
Sbjct: 256 SLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPL 296
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 151/281 (53%), Gaps = 26/281 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G G +AT +++G VAVKK++ K R + F ++ + + D +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEV-----VIMRDYQ------- 79
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
HENVV+ YN++ + +++ ME EGG L D + +R E+ A V +L+
Sbjct: 80 ----HENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQA 132
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAP 282
+ H G++HRD+K ++ L D +K +DFG + K + + +VG+ Y++AP
Sbjct: 133 LSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 189
Query: 283 EVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341
E++ R GPE D+WS+G++ ++ G P++++ K + N P R K +S
Sbjct: 190 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSP 248
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGG-DASEIPI 381
S K F+ +LLV+DP R TAA+ L HP++ + G AS +P+
Sbjct: 249 SLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPL 289
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 151/281 (53%), Gaps = 26/281 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G G +AT +++G VAVKK++ K R + F ++ + + D +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEV-----VIMRDYQ------- 75
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
HENVV+ YN++ + +++ ME EGG L D + +R E+ A V +L+
Sbjct: 76 ----HENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQA 128
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAP 282
+ H G++HRD+K ++ L D +K +DFG + K + + +VG+ Y++AP
Sbjct: 129 LSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 185
Query: 283 EVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341
E++ R GPE D+WS+G++ ++ G P++++ K + N P R K +S
Sbjct: 186 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSP 244
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGG-DASEIPI 381
S K F+ +LLV+DP R TAA+ L HP++ + G AS +P+
Sbjct: 245 SLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPL 285
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 148/278 (53%), Gaps = 25/278 (8%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G G +AT +++G VAVKK++ K R + F ++ + + D +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEV-----VIMRDYQ------- 129
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
HENVV+ YN++ + +++ ME EGG L D + +R E+ A V +L+
Sbjct: 130 ----HENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQA 182
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAP 282
+ H G++HRD+K ++ L D +K +DFG + K + + +VG+ Y++AP
Sbjct: 183 LSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 239
Query: 283 EVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341
E++ R GPE D+WS+G++ ++ G P++++ K + N P R K +S
Sbjct: 240 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSP 298
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
S K F+ +LLV+DP R TAA+ L HP++ + G + I
Sbjct: 299 SLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASI 336
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 145/282 (51%), Gaps = 20/282 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
K+ +Y I + LG G+FG + + ++ K + + V + +L
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSS----------KKTYMAKFVKVKGTDQVL--- 47
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
VK+E+ IL +A H N++ + +FE + + E G ++ +RI E+
Sbjct: 48 ---VKKEISILN-IARHRNILHLHESFESMEELVMIFEFISGLDIFERI-NTSAFELNER 102
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+ V Q+ H H + H D++PEN ++++ + S++K +FG + +KPG F+
Sbjct: 103 EIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLKPGDNFR 161
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
+ + Y APEV + +D+WS+G + Y+LL G PF +T I + ++ +
Sbjct: 162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT 221
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
F + + IS A DFV +LLVK+ ++R+TA++AL HPW+++
Sbjct: 222 FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 136/284 (47%), Gaps = 25/284 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K +G G F +A G VAVK I+K ++ S Q L R
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL--NSSSLQKLF-----------R 62
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I + L H N+VK + E + +Y+ E GGE+ D ++A R EK+A
Sbjct: 63 EVRIXKVL-NHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAH--GRXKEKEARAKF 119
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K G+
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDA---DXNIKIADFGFSNEFTFGNKLDAFCGAP 176
Query: 278 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K R P
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIP 233
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ S ++ +KK L+ +P R T Q W G + E+
Sbjct: 234 F-YXSTDCENLLKKFLILNPSKRGTLEQIXKDRWXNVGHEDDEL 276
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 143/284 (50%), Gaps = 25/284 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K +G G F +A G VAVK I+K ++ P +++ + R
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLN-------------PTSLQKLFR 63
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I++ L H N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 64 EVRIMKIL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKF 120
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
RQ++ CH +VHRD+K EN L D ++K DFG S+ G K GS
Sbjct: 121 RQIVSAVQYCHQKYIVHRDLKAENLLLDG---DMNIKIADFGFSNEFTVGNKLDTFCGSP 177
Query: 278 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K R P
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIP 234
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ +S ++ +KKLLV +P R + Q + W+ G + E+
Sbjct: 235 F-YMSTDCENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEEEL 277
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 140/287 (48%), Gaps = 15/287 (5%)
Query: 88 FGYDKDFDRRYTI-GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKM 146
F ++F+ Y + K LG G+F K+ G A K ++K + QD +
Sbjct: 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR------RGQDCRA 73
Query: 147 ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS 206
++ E+ +L+ V+ + +E+ + + + +E GGE+ L +
Sbjct: 74 -------EILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAE 126
Query: 207 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
+E D +++Q+L H + +VH D+KP+N L S +K DFG+S I
Sbjct: 127 MVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH 186
Query: 267 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325
+ ++I+G+ Y+APE+L +D+W+IG+I Y+LL PF + + +
Sbjct: 187 ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNIS 246
Query: 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ D+ + + S+S A DF++ LLVK+P R TA LSH W+++
Sbjct: 247 QVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 156/314 (49%), Gaps = 46/314 (14%)
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
++L +KQ + + +RQ + +DF+ IG+ LG G+FG Y+A +K +
Sbjct: 15 EELASKQKNEESKKRQWAL------------EDFE----IGRPLGKGKFGNVYLAREKQS 58
Query: 121 GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 180
+A+K + K ++ V Q ++REV+I Q+ H N+++ Y F D
Sbjct: 59 KFILALKVLFKAQLEKAGVEHQ------------LRREVEI-QSHLRHPNILRLYGYFHD 105
Query: 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 240
VY+ +E G + + +K S++ E+ A + ++ + CH ++HRD+KPE
Sbjct: 106 ATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 163
Query: 241 NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIG 299
N L SA E LK DFG S P + D+ G+ Y+ PE+++ R + D+WS+G
Sbjct: 164 NLLLGSAGE---LKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 219
Query: 300 VITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPR 356
V+ Y L G+ PF T +K + R + PDF ++ A+D + +LL +P
Sbjct: 220 VLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPS 272
Query: 357 ARLTAAQALSHPWV 370
R + L HPW+
Sbjct: 273 QRPMLREVLEHPWI 286
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 20/283 (7%)
Query: 156 KREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+REV++ + ++V+ + +E+ + I E +GGEL RI + D +TE+
Sbjct: 102 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTER 161
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+A+ + + + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 162 EASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 221
Query: 272 DIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFK 322
+ YYVAPEVL GPE D WS+GVI YILLCG PF+ G
Sbjct: 222 TPCYTPYYVAPEVL----GPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKT 277
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
+ + +F W +S K ++ LL +P R T + +HPW+ + + P+
Sbjct: 278 RIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLH 337
Query: 383 IS-VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDA 424
S VL ++ ++ +K+ ALA+ D E ++ DA
Sbjct: 338 TSRVLKEDKE--RWEDVKEEXTSALATMRVDYEQIKIKKIEDA 378
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 50
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I A+ HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 51 NIKKEICI-NAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 164
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 218
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 141/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 62
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E GE+ + +K S++ E+ A +
Sbjct: 63 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYI 119
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTL 175
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 233
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 234 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 141/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 62
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E GE+ + +K S++ E+ A +
Sbjct: 63 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYI 119
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRXXLXGTL 175
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 233
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 234 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 141/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 62
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 63 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 119
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + D+ G+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTDLCGTL 175
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 233
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 234 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 141/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 58
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 59 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 115
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + D+ G+
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTDLCGTL 171
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 229
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 230 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 141/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 57
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 58 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 114
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + D+ G+
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTDLCGTL 170
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 228
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 229 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 141/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 57
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 58 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 114
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + D+ G+
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTDLCGTL 170
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 228
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 229 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 148/295 (50%), Gaps = 35/295 (11%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVS 140
P G + + + DFD IG+ LG G+FG Y+A ++ + +A+K + K ++ V
Sbjct: 2 PLGSKRQWTLE-DFD----IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE 56
Query: 141 FQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI 200
Q ++REV+I Q+ H N+++ Y F D VY+ +E G + +
Sbjct: 57 HQ------------LRREVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 103
Query: 201 LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
+K SR+ E+ A + ++ + CH ++HRD+KPEN L S E LK DFG
Sbjct: 104 --QKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFGW 158
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDG 319
S P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G PF T
Sbjct: 159 SVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE 217
Query: 320 IFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
++ + R + PDF ++ A+D + +LL + RLT A+ L HPW++
Sbjct: 218 TYRRISRVEFTFPDF-------VTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 141/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 60
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 61 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 117
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + D+ G+
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRDDLCGTL 173
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 231
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 232 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 148/295 (50%), Gaps = 35/295 (11%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVS 140
P G + + + DFD IG+ LG G+FG Y+A ++ + +A+K + K ++ V
Sbjct: 2 PLGSKRQWTLE-DFD----IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE 56
Query: 141 FQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI 200
Q ++REV+I Q+ H N+++ Y F D VY+ +E G + +
Sbjct: 57 HQ------------LRREVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 103
Query: 201 LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
+K SR+ E+ A + ++ + CH ++HRD+KPEN L S E LK DFG
Sbjct: 104 --QKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFGW 158
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDG 319
S P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G PF T
Sbjct: 159 SVH-APSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE 217
Query: 320 IFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
++ + R + PDF ++ A+D + +LL + RLT A+ L HPW++
Sbjct: 218 TYRRISRVEFTFPDF-------VTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 155/314 (49%), Gaps = 46/314 (14%)
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
++L +KQ + + +RQ + +DF+ IG+ LG G+FG Y+A +K +
Sbjct: 15 EELASKQKNEESKKRQWAL------------EDFE----IGRPLGKGKFGNVYLAREKQS 58
Query: 121 GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 180
+A+K + K ++ V Q ++REV+I Q+ H N+++ Y F D
Sbjct: 59 KFILALKVLFKAQLEKAGVEHQ------------LRREVEI-QSHLRHPNILRLYGYFHD 105
Query: 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 240
VY+ +E G + + +K S++ E+ A + ++ + CH ++HRD+KPE
Sbjct: 106 ATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 163
Query: 241 NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIG 299
N L SA E LK DFG S P + + G+ Y+ PE+++ R + D+WS+G
Sbjct: 164 NLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 219
Query: 300 VITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPR 356
V+ Y L G+ PF T +K + R + PDF ++ A+D + +LL +P
Sbjct: 220 VLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPS 272
Query: 357 ARLTAAQALSHPWV 370
R + L HPW+
Sbjct: 273 QRPMLREVLEHPWI 286
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 49
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 50 NIKKEIXINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 163
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 217
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 50
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 51 NIKKEIXINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 164
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 165 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 218
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 155/314 (49%), Gaps = 46/314 (14%)
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
++L +KQ + + +RQ + +DF+ IG+ LG G+FG Y+A +K +
Sbjct: 6 EELASKQKNEESKKRQWAL------------EDFE----IGRPLGKGKFGNVYLAREKQS 49
Query: 121 GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 180
+A+K + K ++ V Q ++REV+I Q+ H N+++ Y F D
Sbjct: 50 KFILALKVLFKAQLEKAGVEHQ------------LRREVEI-QSHLRHPNILRLYGYFHD 96
Query: 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 240
VY+ +E G + + +K S++ E+ A + ++ + CH ++HRD+KPE
Sbjct: 97 ATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 154
Query: 241 NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIG 299
N L SA E LK DFG S P + + G+ Y+ PE+++ R + D+WS+G
Sbjct: 155 NLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 210
Query: 300 VITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPR 356
V+ Y L G+ PF T +K + R + PDF ++ A+D + +LL +P
Sbjct: 211 VLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPS 263
Query: 357 ARLTAAQALSHPWV 370
R + L HPW+
Sbjct: 264 QRPMLREVLEHPWI 277
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 50
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 51 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 164
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 218
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 49
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 50 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 163
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 217
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 49
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 50 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 163
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 217
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 49
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 50 NIKKEIXINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 163
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 217
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 139/275 (50%), Gaps = 24/275 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + VA+K + K++I V Q ++R
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQ------------LRR 72
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E++I QA H N+++ YN F D +Y+ +E GEL + +K + E+ A ++
Sbjct: 73 EIEI-QAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTATIM 129
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ CH ++HRD+KPEN LK DFG S P + + + G+
Sbjct: 130 EELADALMYCHGKKVIHRDIKPEN---LLLGLKGELKIADFGWSVH-APSLRRKTMCGTL 185
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336
Y+ PE+++ R + D+W IGV+ Y LL G PF + + ++ +++ F
Sbjct: 186 DYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFP---- 241
Query: 337 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
S+ A+D + KLL +P RL AQ +HPWVR
Sbjct: 242 ASVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVR 276
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 48
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 49 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 105
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 106 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 162
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 216
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 217 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 253
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 50
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 51 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 164
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 218
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 49
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 50 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 163
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 217
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 49
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 50 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 163
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 217
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 50
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 51 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 164
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 218
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 49
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 50 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 163
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 217
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 49
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 50 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 163
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 217
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 50
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 51 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 164
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 218
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 50
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 51 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 164
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 218
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 50
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 51 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 164
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 218
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 57
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 58 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 114
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + ++ G+
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTELCGTL 170
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 228
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 229 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 49
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 50 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 163
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 217
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 49
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 50 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 163
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 217
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 60
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 61 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 117
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTL 173
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 231
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 232 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 62
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 63 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 119
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTL 175
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 233
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 234 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + R V E
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 49
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 50 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 163
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDS-----XQEY 217
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 59
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 60 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 116
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 117 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRXXLCGTL 172
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 230
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 231 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 57
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 58 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 114
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTL 170
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 228
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 229 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQ------------LRR 57
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 58 EVEI-QSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 114
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 115 TELANALSYCHSKKVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRAALCGTL 170
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDF-- 228
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 229 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 58
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 59 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 115
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRDTLCGTL 171
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 229
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 230 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 56
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 57 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 113
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 114 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRTTLCGTL 169
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 170 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 227
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 228 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 259
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 58
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 59 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 115
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSCH-APSSRRTTLSGTL 171
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 229
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 230 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 131/266 (49%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F T +A + A A+K +EK I I V V R
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 79
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 80 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 136
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 253
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 254 KFFP----KARDLVEKLLVLDATKRL 275
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 60
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 61 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 117
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRTTLCGTL 173
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 231
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 232 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 61
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 62 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 118
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRTTLCGTL 174
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 232
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 233 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 264
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 28/280 (10%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
DFD IG+ LG G+FG Y+A +K N +A+K + K+++ V Q
Sbjct: 16 DFD----IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ---------- 61
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
++RE++I Q+ H N+++ YN F D +Y+ +E GEL + +K R+ E+
Sbjct: 62 --LRREIEI-QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQR 116
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
+A + ++ CH ++HRD+KPEN L E LK DFG S P + +
Sbjct: 117 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWS-VHAPSLRRRX 172
Query: 273 IVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
+ G+ Y+ PE+++ K+ E D+W GV+ Y L G PF + + ++ F
Sbjct: 173 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 232
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
P +S+ +KD + KLL P RL + HPWV+
Sbjct: 233 P----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 268
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 139/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 62
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 63 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 119
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTL 175
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE ++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 233
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 234 -----VTEGARDLISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 57
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 58 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 114
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRXXLCGTL 170
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 228
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 229 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 60
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 61 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 117
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRXXLCGTL 173
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 231
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 232 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 57
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 58 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 114
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRTXLCGTL 170
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 228
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 229 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 28/280 (10%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
DFD IG+ LG G+FG Y+A +K N +A+K + K+++ V Q
Sbjct: 15 DFD----IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ---------- 60
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
++RE++I Q+ H N+++ YN F D +Y+ +E GEL + +K R+ E+
Sbjct: 61 --LRREIEI-QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQR 115
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
+A + ++ CH ++HRD+KPEN L E LK DFG S P + +
Sbjct: 116 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWS-VHAPSLRRRX 171
Query: 273 IVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
+ G+ Y+ PE+++ K+ E D+W GV+ Y L G PF + + ++ F
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
P +S+ +KD + KLL P RL + HPWV+
Sbjct: 232 P----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 60
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 61 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 117
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRAALCGTL 173
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 231
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 232 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 57
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 58 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 114
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRAALCGTL 170
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 228
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 229 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 136/277 (49%), Gaps = 36/277 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G G +A ++ + VAVK ++ + R V E
Sbjct: 4 FVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVD----MKRAVD----------CPE 49
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 50 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 163
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEY 217
Query: 329 PDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 360
D++ K PW I ++ + K+LV++P AR+T
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 139/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K +A+K + K ++ V Q ++R
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQ------------LRR 54
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 55 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 111
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK DFG S P + + G+
Sbjct: 112 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRTTLCGTL 167
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 168 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 225
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 226 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 257
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 164/335 (48%), Gaps = 41/335 (12%)
Query: 60 YQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKA 119
+Q + H++ + Q V P R Y +F + +G G G +AT+K
Sbjct: 19 FQSMSRVSHEQFRAALQLVVSPGDPRE---YLANFIK-------IGEGSTGIVCIATEKH 68
Query: 120 NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 179
G +VAVKK++ K R + F EV I++ H+NVV Y+++
Sbjct: 69 TGKQVAVKKMDLRKQQRRELLFN---------------EVVIMRDYH-HDNVVDMYSSYL 112
Query: 180 DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 239
+ +++ ME EGG L D + +R E+ A V +LR + H G++HRD+K
Sbjct: 113 VGDELWVVMEFLEGGALTDIV---THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKS 169
Query: 240 ENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWS 297
++ L S D +K +DFG + K K + +VG+ Y++APEV+ R G E D+WS
Sbjct: 170 DSILLTS---DGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWS 226
Query: 298 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 357
+G++ ++ G P++++ + + + P R K +S+ + F+ +LV++P
Sbjct: 227 LGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPP-RVKDLHKVSSVLRGFLDLMLVREPSQ 285
Query: 358 RLTAAQALSHPWVREGGDASEIPIDISVLNNMRQF 392
R TA + L HP+++ G S ++ MRQ+
Sbjct: 286 RATAQELLGHPFLKLAGPPS------CIVPLMRQY 314
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 59
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 60 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 116
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK +FG S P + + G+
Sbjct: 117 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIANFGWSVH-APSSRRTTLCGTL 172
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 230
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 231 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ V Q ++R
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------------LRR 60
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+I Q+ H N+++ Y F D VY+ +E G + + +K S++ E+ A +
Sbjct: 61 EVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 117
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ + CH ++HRD+KPEN L SA E LK +FG S P + + G+
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIANFGWSVH-APSSRRTTLCGTL 173
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRR 333
Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PDF
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-- 231
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ A+D + +LL +P R + L HPW+
Sbjct: 232 -----VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 133/277 (48%), Gaps = 24/277 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY + K +G G FG + DK + + VAVK IE+ + + E+VK
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----------------DENVK 62
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE+ ++L H N+V+F ++ I ME GGEL +RI R++E +A
Sbjct: 63 REIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFF 119
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q++ + CH + HRD+K EN L + LK DFG S + + VG+
Sbjct: 120 FQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGT 178
Query: 277 AYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFR 332
Y+APEVL +K G +DVWS GV Y++L G PF D E F++ + +
Sbjct: 179 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA 238
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
+ IS + + ++ V DP R++ + +H W
Sbjct: 239 IPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEW 275
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 78
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 79 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 135
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 136 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANSFV 192
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 252
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 253 KFFP----KARDLVEKLLVLDATKRL 274
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 133/277 (48%), Gaps = 24/277 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY + K +G G FG + DK + + VAVK IE+ + + E+VK
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----------------DENVK 63
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE+ ++L H N+V+F ++ I ME GGEL +RI R++E +A
Sbjct: 64 REIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFF 120
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q++ + CH + HRD+K EN L + LK FG S + +D VG+
Sbjct: 121 FQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA-PRLKICAFGYSKSSVLHSQPKDTVGT 179
Query: 277 AYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFR 332
Y+APEVL +K G +DVWS GV Y++L G PF D E F++ + +
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA 239
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
+ IS + + ++ V DP R++ + +H W
Sbjct: 240 IPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEW 276
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 79
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 80 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 136
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 253
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 254 KFFP----KARDLVEKLLVLDATKRL 275
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 82
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 83 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 139
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 140 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANSFV 196
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 256
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 257 KFFP----KARDLVEKLLVLDATKRL 278
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 81
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 82 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 138
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 255
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 256 KFFP----KARDLVEKLLVLDATKRL 277
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 79
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 80 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 136
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 253
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 254 KFFP----KARDLVEKLLVLDATKRL 275
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 78
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 79 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 135
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 136 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 192
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 252
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 253 KFFP----KARDLVEKLLVLDATKRL 274
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 129/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 81
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 82 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 138
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF ++++ + DF
Sbjct: 196 GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE 255
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 256 KFFP----KARDLVEKLLVLDATKRL 277
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 81
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 82 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 138
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 255
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 256 KFFP----KARDLVEKLLVLDATKRL 277
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 132/277 (47%), Gaps = 24/277 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY + K +G G FG + DK + + VAVK IE+ + + +VK
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----------------AANVK 63
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE+ ++L H N+V+F ++ I ME GGEL +RI R++E +A
Sbjct: 64 REIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFF 120
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q++ + CH + HRD+K EN L + LK DFG S + + VG+
Sbjct: 121 FQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGT 179
Query: 277 AYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFR 332
Y+APEVL +K G +DVWS GV Y++L G PF D E F++ + +
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA 239
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
+ IS + + ++ V DP R++ + +H W
Sbjct: 240 IPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEW 276
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 79
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 80 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 136
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANAFV 193
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 253
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 254 KFFP----KARDLVEKLLVLDATKRL 275
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 63
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 64 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 120
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 121 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 177
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 178 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 237
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 238 KFFP----KARDLVEKLLVLDATKRL 259
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 86
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 87 ERDVMSRL-DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 143
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 144 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 200
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 201 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 260
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 261 KFFP----KARDLVEKLLVLDATKRL 282
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 81
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 82 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 138
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 255
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 256 KFFP----KARDLVEKLLVLDATKRL 277
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 82
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 83 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 139
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 140 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 196
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 256
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 257 KFFP----KARDLVEKLLVLDATKRL 278
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 129/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 81
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 82 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 138
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF ++++ + DF
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE 255
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 256 KFFP----KARDLVEKLLVLDATKRL 277
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 56
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 57 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 113
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 114 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 170
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 171 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 230
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 231 KFFP----KARDLVEKLLVLDATKRL 252
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 59
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 60 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 116
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 117 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 173
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 174 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 233
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 234 KFFP----KARDLVEKLLVLDATKRL 255
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 58
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 59 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 115
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 116 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 172
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 173 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 232
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 233 KFFP----KARDLVEKLLVLDATKRL 254
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 57
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 58 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 114
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 115 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 171
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 172 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 231
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 232 KFFP----KARDLVEKLLVLDATKRL 253
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 138/280 (49%), Gaps = 28/280 (10%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
DFD I + LG G+FG Y+A +K N +A+K + K+++ V Q
Sbjct: 15 DFD----IVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ---------- 60
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
++RE++I Q+ H N+++ YN F D +Y+ +E GEL + +K R+ E+
Sbjct: 61 --LRREIEI-QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQR 115
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
+A + ++ CH ++HRD+KPEN L E LK DFG S P + +
Sbjct: 116 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWS-VHAPSLRRRX 171
Query: 273 IVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
+ G+ Y+ PE+++ K+ E D+W GV+ Y L G PF + + ++ F
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
P +S+ +KD + KLL P RL + HPWV+
Sbjct: 232 P----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 132/277 (47%), Gaps = 24/277 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY + K +G G FG + DK + + VAVK IE+ + + E+VK
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----------------DENVK 63
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE+ ++L H N+V+F ++ I ME GGEL +RI R++E +A
Sbjct: 64 REIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFF 120
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q++ + CH + HRD+K EN L + LK FG S + + VG+
Sbjct: 121 FQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA-PRLKICAFGYSKSSVLHSQPKSTVGT 179
Query: 277 AYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFR 332
Y+APEVL +K G +DVWS GV Y++L G PF D E F++ + +
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA 239
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
+ IS + + ++ V DP R++ + +H W
Sbjct: 240 IPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEW 276
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 129/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 81
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + G LL I +K + E
Sbjct: 82 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI--RKIGSFDETCTRFYT 138
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANSFV 195
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 196 GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 255
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K +P A+D V+KLLV D RL
Sbjct: 256 KFFP----KARDLVEKLLVLDATKRL 277
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 129/266 (48%), Gaps = 26/266 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ GK+LG G F +A + A A+K +EK I I V V R
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTR 84
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 85 ERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 141
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K V
Sbjct: 142 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFV 198
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 199 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPA 258
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
+P A+D V+KLLV D RL
Sbjct: 259 AFFP----KARDLVEKLLVLDATKRL 280
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 132/282 (46%), Gaps = 34/282 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY K +G G FG + DK + VAVK IE+ + E+V+
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----------------DENVQ 64
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE+ ++L H N+V+F ++ I ME GGEL +RI R++E +A
Sbjct: 65 REIINHRSLR-HPNIVRFKEVILTPTHLAIIMEYASGGELYERIC--NAGRFSEDEARFF 121
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q+L + CH + HRD+K EN L + LK DFG S + + VG+
Sbjct: 122 FQQLLSGVSYCHSMQICHRDLKLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGT 180
Query: 277 AYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-------N 327
Y+APEVL R+ G +DVWS GV Y++L G PF D E +++ ++ +
Sbjct: 181 PAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS 240
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
PD R IS + ++ V DP R++ + +H W
Sbjct: 241 IPDDIR-----ISPECCHLISRIFVADPATRISIPEIKTHSW 277
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 131/277 (47%), Gaps = 24/277 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY + K +G G FG + DK + VAVK IE+ + + E+VK
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKI----------------DENVK 63
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE+ ++L H N+V+F ++ I ME GGEL +RI R++E +A
Sbjct: 64 REIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFF 120
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q++ + H + HRD+K EN L + LK DFG S + + VG+
Sbjct: 121 FQQLISGVSYAHAMQVAHRDLKLENTLLDGSPA-PRLKIADFGYSKASVLHSQPKSAVGT 179
Query: 277 AYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFR 332
Y+APEVL +K G +DVWS GV Y++L G PF D E F++ + +
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA 239
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
+ IS + + ++ V DP R++ + +H W
Sbjct: 240 IPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEW 276
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 142/287 (49%), Gaps = 24/287 (8%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY G+ LG G F Y TD + A K + K+ +L P E +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL------------KPHQKEKM 89
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
E+ I ++L + +VV F+ FEDD++VY+ +E+C LL+ L K+ TE +A
Sbjct: 90 STEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARY 146
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIV 274
+RQ ++ H + ++HRD+K N +D +K DFGL+ I+ G++ +D+
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKKDLC 203
Query: 275 GSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+ Y+APEVL +K E D+WS+G I Y LL G+ PF + + +N+ R
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR 263
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380
I+ A ++++L DP R + A+ L+ + G +P
Sbjct: 264 ----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 142/287 (49%), Gaps = 24/287 (8%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY G+ LG G F Y TD + A K + K+ +L P E +
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL------------KPHQKEKM 73
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
E+ I ++L + +VV F+ FEDD++VY+ +E+C LL+ L K+ TE +A
Sbjct: 74 STEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARY 130
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIV 274
+RQ ++ H + ++HRD+K N +D +K DFGL+ I+ G++ +D+
Sbjct: 131 FMRQTIQGVQYLHNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKKDLC 187
Query: 275 GSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+ Y+APEVL +K E D+WS+G I Y LL G+ PF + + +N+ R
Sbjct: 188 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR 247
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380
I+ A ++++L DP R + A+ L+ + G +P
Sbjct: 248 ----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 290
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 143/282 (50%), Gaps = 26/282 (9%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G F + +D A+ V KI +L++ P E + E+ I
Sbjct: 28 FLGKGGFAKCFEISD-ADTKEVFAGKIVPKSLLLK-----------PHQREKMSMEISIH 75
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
++LA H++VV F+ FED+++V++ +ELC LL+ L K+ TE +A +RQ++
Sbjct: 76 RSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVL 132
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVA 281
H + ++HRD+K N ED +K DFGL+ ++ G++ + + G+ Y+A
Sbjct: 133 GCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIA 189
Query: 282 PEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSI 339
PEVL +K E DVWSIG I Y LL G+ PF E KE LR K + P I
Sbjct: 190 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK-HI 244
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 245 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 286
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 143/282 (50%), Gaps = 26/282 (9%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G F + +D A+ V KI +L++ P E + E+ I
Sbjct: 24 FLGKGGFAKCFEISD-ADTKEVFAGKIVPKSLLLK-----------PHQREKMSMEISIH 71
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
++LA H++VV F+ FED+++V++ +ELC LL+ L K+ TE +A +RQ++
Sbjct: 72 RSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVL 128
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVA 281
H + ++HRD+K N ED +K DFGL+ ++ G++ + + G+ Y+A
Sbjct: 129 GCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIA 185
Query: 282 PEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSI 339
PEVL +K E DVWSIG I Y LL G+ PF E KE LR K + P I
Sbjct: 186 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK-HI 240
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 241 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 282
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 143/282 (50%), Gaps = 26/282 (9%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G F + +D A+ V KI +L++ P E + E+ I
Sbjct: 24 FLGKGGFAKCFEISD-ADTKEVFAGKIVPKSLLLK-----------PHQREKMSMEISIH 71
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
++LA H++VV F+ FED+++V++ +ELC LL+ L K+ TE +A +RQ++
Sbjct: 72 RSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVL 128
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVA 281
H + ++HRD+K N ED +K DFGL+ ++ G++ + + G+ Y+A
Sbjct: 129 GCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIA 185
Query: 282 PEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSI 339
PEVL +K E DVWSIG I Y LL G+ PF E KE LR K + P I
Sbjct: 186 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK-HI 240
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 241 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 282
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 140/273 (51%), Gaps = 25/273 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G G +A +K +G +VAVK ++ K R + F ++ + + D +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEV-----VIMRDYQ------- 100
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
H NVV+ Y ++ +++ ME +GG L D + R E+ A V +L+
Sbjct: 101 ----HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQA 153
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAP 282
A H G++HRD+K ++ L D +K +DFG I K K + +VG+ Y++AP
Sbjct: 154 LAYLHAQGVIHRDIKSDSILLTL---DGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAP 210
Query: 283 EVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341
EV+ R E D+WS+G++ ++ G P++ + K LR+ P + K +S
Sbjct: 211 EVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDSPPPKLKNSHKVSP 269
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374
+DF++++LV+DP+ R TA + L HP++ + G
Sbjct: 270 VLRDFLERMLVRDPQERATAQELLDHPFLLQTG 302
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 28/237 (11%)
Query: 156 KREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+REV++ + ++V+ + +E+ + I ME +GGEL RI + D +TE+
Sbjct: 58 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 117
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG
Sbjct: 118 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF----------- 166
Query: 272 DIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRN 327
A E K D+WS+GVI YILLCG PF+ G+ +
Sbjct: 167 ---------AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 217
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 384
+ +F W +S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 218 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 274
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 143/282 (50%), Gaps = 26/282 (9%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G F + +D A+ V KI +L++ P E + E+ I
Sbjct: 22 FLGKGGFAKCFEISD-ADTKEVFAGKIVPKSLLLK-----------PHQREKMSMEISIH 69
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
++LA H++VV F+ FED+++V++ +ELC LL+ L K+ TE +A +RQ++
Sbjct: 70 RSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVL 126
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVA 281
H + ++HRD+K N ED +K DFGL+ ++ G++ + + G+ Y+A
Sbjct: 127 GCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIA 183
Query: 282 PEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSI 339
PEVL +K E DVWSIG I Y LL G+ PF E KE LR K + P I
Sbjct: 184 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK-HI 238
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 239 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 280
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 143/282 (50%), Gaps = 26/282 (9%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G F + +D A+ V KI +L++ P E + E+ I
Sbjct: 46 FLGKGGFAKCFEISD-ADTKEVFAGKIVPKSLLLK-----------PHQREKMSMEISIH 93
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
++LA H++VV F+ FED+++V++ +ELC LL+ L K+ TE +A +RQ++
Sbjct: 94 RSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVL 150
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVA 281
H + ++HRD+K N ED +K DFGL+ ++ G++ + + G+ Y+A
Sbjct: 151 GCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIA 207
Query: 282 PEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSI 339
PEVL +K E DVWSIG I Y LL G+ PF E KE LR K + P I
Sbjct: 208 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK-HI 262
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 263 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 304
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 104/173 (60%), Gaps = 11/173 (6%)
Query: 390 RQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 449
+QF ++ K+ ALR +A +L +EE+A L++ F+ ID DK+G I+ EE++ L K +
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGL-KRVGAN 59
Query: 450 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 509
LKES +L++ QA D + G +D+ EF+AATLH++++E D HL AAF FD D
Sbjct: 60 LKESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIERED----HLF--AAFTYFDKDGS 113
Query: 510 GFITPEELRMHTGLKGSIDPLLEE----ADIDKDGRISLSEFRRLLRTASISS 558
G+ITP+EL+ G D +EE D D DGRI +EF + SI+
Sbjct: 114 GYITPDELQQACEEFGVEDVRIEELXRDVDQDNDGRIDYNEFVAXXQKGSITG 166
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 141/287 (49%), Gaps = 24/287 (8%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY G+ LG G F Y TD + A K + K+ +L P E +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL------------KPHQKEKM 89
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
E+ I ++L + +VV F+ FEDD++VY+ +E+C LL+ L K+ TE +A
Sbjct: 90 STEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARY 146
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIV 274
+RQ ++ H + ++HRD+K N +D +K DFGL+ I+ G++ + +
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKKTLC 203
Query: 275 GSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+ Y+APEVL +K E D+WS+G I Y LL G+ PF + + +N+ R
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR 263
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380
I+ A ++++L DP R + A+ L+ + G +P
Sbjct: 264 H----INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 143/282 (50%), Gaps = 26/282 (9%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G F + +D A+ V KI +L++ P E + E+ I
Sbjct: 48 FLGKGGFAKCFEISD-ADTKEVFAGKIVPKSLLLK-----------PHQREKMSMEISIH 95
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
++LA H++VV F+ FED+++V++ +ELC LL+ L K+ TE +A +RQ++
Sbjct: 96 RSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVL 152
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVA 281
H + ++HRD+K N ED +K DFGL+ ++ G++ + + G+ Y+A
Sbjct: 153 GCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIA 209
Query: 282 PEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSI 339
PEVL +K E DVWSIG I Y LL G+ PF E KE LR K + P I
Sbjct: 210 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK-HI 264
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 265 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 306
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 141/287 (49%), Gaps = 24/287 (8%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY G+ LG G F Y TD + A K + K+ +L P E +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL------------KPHQKEKM 89
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
E+ I ++L + +VV F+ FEDD++VY+ +E+C LL+ L K+ TE +A
Sbjct: 90 STEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARY 146
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIV 274
+RQ ++ H + ++HRD+K N +D +K DFGL+ I+ G++ + +
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKKXLC 203
Query: 275 GSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+ Y+APEVL +K E D+WS+G I Y LL G+ PF + + +N+ R
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR 263
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380
I+ A ++++L DP R + A+ L+ + G +P
Sbjct: 264 H----INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 132/278 (47%), Gaps = 29/278 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G +G Y A K G VA+K++ DL+ I+ +E+ I+Q
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES---------DLQEII--------KEISIMQ 79
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+VVK+Y ++ + ++I ME C G + D I+ ++ TE + A +++ L+
Sbjct: 80 Q-CDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKG 137
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
H +HRD+K N L + + K DFG++ K ++G+ +++AP
Sbjct: 138 LEYLHFMRKIHRDIKAGNILLNT---EGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAP 194
Query: 283 EVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSI 339
EV++ +D+WS+G+ + G+ P+ D + N P RKP W
Sbjct: 195 EVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELW--- 251
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377
S++ DFVK+ LVK P R TA Q L HP+VR S
Sbjct: 252 SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 131/285 (45%), Gaps = 26/285 (9%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
+ ++ ++Y+ LG G FG+ + A DK V VK I+K K+L +D K+
Sbjct: 19 EGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVL-EDCWIEDPKL---- 73
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI-LAKKDSRYT 209
V E+ IL + H N++K + FE+ + + ME + G LD + R
Sbjct: 74 --GKVTLEIAILSRVE-HANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLD 128
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E A+ + RQ++ L ++HRD+K EN + ED ++K DFG + +++ GK
Sbjct: 129 EPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFGSAAYLERGKL 185
Query: 270 FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327
F G+ Y APEVL GPE ++WS+GV Y L+ PF + L
Sbjct: 186 FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE----------LEE 235
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ P +S V LL P R T + ++ PWV +
Sbjct: 236 TVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 142/300 (47%), Gaps = 36/300 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ + +L+G+G +G Y G A+K ++ V ++ E++K+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIK-------VMDVTGDEE---------EEIKQ 69
Query: 158 EVKILQALAGHENVVKFYNAFED------DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
E+ +L+ + H N+ +Y AF D+ +++ ME C G + D I K + E+
Sbjct: 70 EINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEE 129
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKF 270
A + R++LR + H H ++HRD+K +N L E++ +K DFG+S + + +
Sbjct: 130 WIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVGRR 186
Query: 271 QDIVGSAYYVAPEVLKRKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324
+G+ Y++APEV+ P+ SD+WS+G+ + G P D +
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 246
Query: 325 LRN-KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI 383
RN P + K W S + F++ LVK+ R Q + HP++R+ + ++ I +
Sbjct: 247 PRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQL 303
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 135/281 (48%), Gaps = 30/281 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ I + LG G FG ++ + NG R K+ K +I++R+ VE
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNG-RYYAMKVLKKEIVVRLKQ-----------VEHTND 55
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E +++ ++ H +++ + F+D +++ M+ EGGEL L +K R+ A
Sbjct: 56 E-RLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS--LLRKSQRFPNPVAKFYA 112
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ H +++RD+KPEN L ++ +K TDFG + ++ P + + G+
Sbjct: 113 AEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYV-PDVTYX-LCGTP 167
Query: 278 YYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336
Y+APEV+ K +S D WS G++ Y +L G PF+D ++++L + F
Sbjct: 168 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP---- 223
Query: 337 PSISNSAKDFVKKLLVKDPRARLTAAQ-----ALSHPWVRE 372
P + KD + +L+ +D RL Q +HPW +E
Sbjct: 224 PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 131/279 (46%), Gaps = 29/279 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
++LG G FG +A K GD AVK ++K+ IL QD VE E +I
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL------QDDD------VECTMTEKRI 76
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L H + + + F+ + ++ ME GG+L+ I +K R+ E A +++
Sbjct: 77 LSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAAEII 134
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYV 280
H G+++RD+K +N L + K DFG+ + I G G+ Y+
Sbjct: 135 SALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADFGMCKEGICNGVTTATFCGTPDYI 191
Query: 281 APEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APE+L+ GP D W++GV+ Y +LCG PF + ED +F+ +L ++ + W +
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY--PTW--L 247
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQ------ALSHPWVRE 372
A +K + K+P RL + L HP+ +E
Sbjct: 248 HEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 137/294 (46%), Gaps = 29/294 (9%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLK---------- 145
+YT+ +G G +G +A ++ + A+K + K K LIR F
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKK-LIRQAGFPRRPPPRGTRPAPG 71
Query: 146 -MILPIA-VEDVKREVKILQALAGHENVVKFYNAFEDDN--YVYIAMELCEGGELLDRIL 201
I P +E V +E+ IL+ L H NVVK +D N ++Y+ EL G +++
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT 130
Query: 202 AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261
K S E A + +++ H ++HRD+KP N L ED +K DFG+S
Sbjct: 131 LKPLS---EDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLL---VGEDGHIKIADFGVS 184
Query: 262 DFIKPGKKF-QDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKT 316
+ K + VG+ ++APE L SG DVW++GV Y + G+ PF D+
Sbjct: 185 NEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244
Query: 317 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
+ ++ +F +P I+ KD + ++L K+P +R+ + HPWV
Sbjct: 245 IMCLHSKIKSQALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 135/289 (46%), Gaps = 32/289 (11%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D D + + I LG G FG Y A +K G A K IE S ++L
Sbjct: 6 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK-------SEEEL------ 52
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
ED E++IL A H +VK A+ D ++I +E C GG + D I+ + D TE
Sbjct: 53 --EDYIVEIEIL-ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTE 108
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKK 269
VV RQML H ++HRD+K N L + ++ DFG+S +K +K
Sbjct: 109 PQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL---EGDIRLADFGVSAKNLKTLQK 165
Query: 270 FQDIVGSAYYVAPEVL---KRKSGP---ESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
+G+ Y++APEV+ K P ++D+WS+G+ + P + + +
Sbjct: 166 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK 225
Query: 324 VLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
+ ++ P P W S +DF+K L K+P R +AAQ L HP+V
Sbjct: 226 IAKSDPPTLLTPSKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 135/289 (46%), Gaps = 32/289 (11%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D D + + I LG G FG Y A +K G A K IE S ++L
Sbjct: 14 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK-------SEEEL------ 60
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
ED E++IL A H +VK A+ D ++I +E C GG + D I+ + D TE
Sbjct: 61 --EDYIVEIEIL-ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTE 116
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKK 269
VV RQML H ++HRD+K N L + ++ DFG+S +K +K
Sbjct: 117 PQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL---EGDIRLADFGVSAKNLKTLQK 173
Query: 270 FQDIVGSAYYVAPEVL---KRKSGP---ESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
+G+ Y++APEV+ K P ++D+WS+G+ + P + + +
Sbjct: 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK 233
Query: 324 VLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
+ ++ P P W S +DF+K L K+P R +AAQ L HP+V
Sbjct: 234 IAKSDPPTLLTPSKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 135/278 (48%), Gaps = 36/278 (12%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG Y A +K A K I+ S ++L ED E+ IL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK-------SEEEL--------EDYMVEIDIL- 88
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
A H N+VK +AF +N ++I +E C GG + D ++ + + TE VV +Q L
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDA 147
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYV 280
H + ++HRD+K N LF D +K DFG+S K + Q +G+ Y++
Sbjct: 148 LNYLHDNKIIHRDLKAGNILFTL---DGDIKLADFGVS--AKNTRTIQRRDSFIGTPYWM 202
Query: 281 APEVLKRKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
APEV+ ++ + +DVWS+G+ + P + + ++ +++P +
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
Query: 335 P--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
P W S++ KDF+KK L K+ AR T +Q L HP+V
Sbjct: 263 PSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 135/278 (48%), Gaps = 36/278 (12%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG Y A +K A K I+ S ++L ED E+ IL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK-------SEEEL--------EDYMVEIDIL- 88
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
A H N+VK +AF +N ++I +E C GG + D ++ + + TE VV +Q L
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDA 147
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYV 280
H + ++HRD+K N LF D +K DFG+S K + Q +G+ Y++
Sbjct: 148 LNYLHDNKIIHRDLKAGNILFTL---DGDIKLADFGVS--AKNTRXIQRRDSFIGTPYWM 202
Query: 281 APEVLKRKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
APEV+ ++ + +DVWS+G+ + P + + ++ +++P +
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
Query: 335 P--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
P W S++ KDF+KK L K+ AR T +Q L HP+V
Sbjct: 263 PSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 24/265 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
KLLG G FG + +KA G A+K + K I+ + V E ++
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK------------DEVAHTVTESRV 61
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQ H + AF+ + + ME GGEL + ++ +TE+ A +++
Sbjct: 62 LQN-TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIV 118
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYV 280
H +V+RD+K EN + +D +K TDFGL + I G + G+ Y+
Sbjct: 119 SALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 175
Query: 281 APEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TL 231
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQA 364
S AK + LL KDP+ RL +
Sbjct: 232 SPEAKSLLAGLLKKDPKQRLGGGPS 256
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 24/265 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
KLLG G FG + +KA G A+K + K I+ + V E ++
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK------------DEVAHTVTESRV 58
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQ H + AF+ + + ME GGEL + ++ +TE+ A +++
Sbjct: 59 LQN-TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIV 115
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYV 280
H +V+RD+K EN + +D +K TDFGL + I G + G+ Y+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 281 APEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TL 228
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQA 364
S AK + LL KDP+ RL +
Sbjct: 229 SPEAKSLLAGLLKKDPKQRLGGGPS 253
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 135/278 (48%), Gaps = 36/278 (12%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG Y A +K A K I+ S ++L ED E+ IL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK-------SEEEL--------EDYMVEIDIL- 88
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
A H N+VK +AF +N ++I +E C GG + D ++ + + TE VV +Q L
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDA 147
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYV 280
H + ++HRD+K N LF D +K DFG+S K + Q +G+ Y++
Sbjct: 148 LNYLHDNKIIHRDLKAGNILFTL---DGDIKLADFGVS--AKNTRXIQRRDXFIGTPYWM 202
Query: 281 APEVLKRKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
APEV+ ++ + +DVWS+G+ + P + + ++ +++P +
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
Query: 335 P--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
P W S++ KDF+KK L K+ AR T +Q L HP+V
Sbjct: 263 PSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 24/265 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
KLLG G FG + +KA G A+K + K I+ + V E ++
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK------------DEVAHTVTESRV 58
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQ H + AF+ + + ME GGEL + ++ +TE+ A +++
Sbjct: 59 LQN-TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIV 115
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYV 280
H +V+RD+K EN + +D +K TDFGL + I G + G+ Y+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 281 APEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TL 228
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQA 364
S AK + LL KDP+ RL +
Sbjct: 229 SPEAKSLLAGLLKKDPKQRLGGGPS 253
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 137/281 (48%), Gaps = 25/281 (8%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D ++YT + +G G G Y A D A G VA++++ Q K L I
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ---------QQPKKELIINE 67
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
V RE K + N+V + +++ + +++ ME GG L D + ++ E
Sbjct: 68 ILVMRENK-------NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQ 117
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQ 271
A V R+ L+ H + ++HRD+K +N L D S+K TDFG I P + K
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRS 174
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
++VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N
Sbjct: 175 EMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 234
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ P +S +DF+ + L D R +A + L H +++
Sbjct: 235 ELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 24/265 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
KLLG G FG + +KA G A+K + K I+ + V E ++
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKD------------EVAHTVTESRV 58
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQ H + AF+ + + ME GGEL + ++ +TE+ A +++
Sbjct: 59 LQN-TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIV 115
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYV 280
H +V+RD+K EN + +D +K TDFGL + I G + G+ Y+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 281 APEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TL 228
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQA 364
S AK + LL KDP+ RL +
Sbjct: 229 SPEAKSLLAGLLKKDPKQRLGGGPS 253
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 24/265 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
KLLG G FG + +KA G A+K + K I+ + V E ++
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK------------DEVAHTVTESRV 58
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQ H + AF+ + + ME GGEL + ++ +TE+ A +++
Sbjct: 59 LQN-TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIV 115
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYV 280
H +V+RD+K EN + +D +K TDFGL + I G + G+ Y+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 281 APEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TL 228
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQA 364
S AK + LL KDP+ RL +
Sbjct: 229 SPEAKSLLAGLLKKDPKQRLGGGPS 253
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 24/265 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
KLLG G FG + +KA G A+K + K I+ + V E ++
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK------------DEVAHTVTESRV 63
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQ H + AF+ + + ME GGEL + ++ +TE+ A +++
Sbjct: 64 LQN-TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIV 120
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYV 280
H +V+RD+K EN + +D +K TDFGL + I G + G+ Y+
Sbjct: 121 SALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 177
Query: 281 APEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TL 233
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQA 364
S AK + LL KDP+ RL +
Sbjct: 234 SPEAKSLLAGLLKKDPKQRLGGGPS 258
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 24/265 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
KLLG G FG + +KA G A+K + K I+ + V E ++
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK------------DEVAHTVTESRV 58
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQ H + AF+ + + ME GGEL + ++ +TE+ A +++
Sbjct: 59 LQN-TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIV 115
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYV 280
H +V+RD+K EN + +D +K TDFGL + I G + G+ Y+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 281 APEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TL 228
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQA 364
S AK + LL KDP+ RL +
Sbjct: 229 SPEAKSLLAGLLKKDPKQRLGGGPS 253
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 25/281 (8%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D ++YT + +G G G Y A D A G VA++++ Q K L I
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ---------QQPKKELIINE 67
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
V RE K + N+V + +++ + +++ ME GG L D + ++ E
Sbjct: 68 ILVMRENK-------NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQ 117
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQ 271
A V R+ L+ H + ++HRD+K +N L D S+K TDFG I P + K
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRS 174
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
+VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N
Sbjct: 175 XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 234
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ P +S +DF+ + L D R +A + L H +++
Sbjct: 235 ELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 150/344 (43%), Gaps = 74/344 (21%)
Query: 84 KRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQD 143
KR + DF + LLG G +G AT K G+ VA+KKIE F
Sbjct: 3 KRIVYNISSDFQ----LKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---------PFDK 49
Query: 144 LKMILPIAVEDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLD 198
P+ RE+KIL+ HEN++ +N +FE+ N VYI EL + L
Sbjct: 50 -----PLFALRTLREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LH 101
Query: 199 RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
R+++ + ++ + Q LR H ++HRD+KP N L S + LK DF
Sbjct: 102 RVISTQ--MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDF 156
Query: 259 GLSDFI--------KPGKK---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYIL 305
GL+ I +P + + V + +Y APEV+ K DVWS G I L
Sbjct: 157 GLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
Query: 306 LCGRRPFWDKTED--------GIF-----------------KEVLRNKPDFRRKP----W 336
RRP + + GI +E +++ P + P +
Sbjct: 217 FL-RRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF 275
Query: 337 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380
P ++ D ++++LV DP R+TA +AL HP+++ D ++ P
Sbjct: 276 PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEP 319
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 150/344 (43%), Gaps = 74/344 (21%)
Query: 84 KRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQD 143
KR + DF + LLG G +G AT K G+ VA+KKIE F
Sbjct: 3 KRIVYNISSDFQ----LKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---------PFDK 49
Query: 144 LKMILPIAVEDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLD 198
P+ RE+KIL+ HEN++ +N +FE+ N VYI EL + L
Sbjct: 50 -----PLFALRTLREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LH 101
Query: 199 RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
R+++ + ++ + Q LR H ++HRD+KP N L S + LK DF
Sbjct: 102 RVISTQ--MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDF 156
Query: 259 GLSDFI--------KPGKK---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYIL 305
GL+ I +P + + V + +Y APEV+ K DVWS G I L
Sbjct: 157 GLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
Query: 306 LCGRRPFWDKTED--------GIF-----------------KEVLRNKPDFRRKP----W 336
RRP + + GI +E +++ P + P +
Sbjct: 217 FL-RRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF 275
Query: 337 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380
P ++ D ++++LV DP R+TA +AL HP+++ D ++ P
Sbjct: 276 PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEP 319
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 150/344 (43%), Gaps = 74/344 (21%)
Query: 84 KRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQD 143
KR + DF + LLG G +G AT K G+ VA+KKIE F
Sbjct: 3 KRIVYNISSDFQ----LKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---------PFDK 49
Query: 144 LKMILPIAVEDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLD 198
P+ RE+KIL+ HEN++ +N +FE+ N VYI EL + L
Sbjct: 50 -----PLFALRTLREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LH 101
Query: 199 RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
R+++ + ++ + Q LR H ++HRD+KP N L S + LK DF
Sbjct: 102 RVISTQ--MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDF 156
Query: 259 GLSDFI--------KPGKK---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYIL 305
GL+ I +P + + V + +Y APEV+ K DVWS G I L
Sbjct: 157 GLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
Query: 306 LCGRRPFWDKTED--------GIF-----------------KEVLRNKPDFRRKP----W 336
RRP + + GI +E +++ P + P +
Sbjct: 217 FL-RRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF 275
Query: 337 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380
P ++ D ++++LV DP R+TA +AL HP+++ D ++ P
Sbjct: 276 PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEP 319
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 25/281 (8%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D ++YT + +G G G Y A D A G VA++++ Q K L I
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ---------QQPKKELIINE 67
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
V RE K + N+V + +++ + +++ ME GG L D + ++ E
Sbjct: 68 ILVMRENK-------NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQ 117
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQ 271
A V R+ L+ H + ++HRD+K +N L D S+K TDFG I P + K
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRS 174
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
+VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 234
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ P +S +DF+ + L D R +A + L H +++
Sbjct: 235 ELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 25/281 (8%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D ++YT + +G G G Y A D A G VA++++ Q K L I
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ---------QQPKKELIINE 68
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
V RE K + N+V + +++ + +++ ME GG L D + ++ E
Sbjct: 69 ILVMRENK-------NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQ 118
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQ 271
A V R+ L+ H + ++HRD+K +N L D S+K TDFG I P + K
Sbjct: 119 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRS 175
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
+VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N
Sbjct: 176 XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 235
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ P +S +DF+ + L D R +A + + H +++
Sbjct: 236 ELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 34/282 (12%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLK 145
G++K ++ + K+LG G FG ++ + D A+K ++K + +R K
Sbjct: 18 GHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR--DRVRTK 75
Query: 146 MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD 205
M I VE H +VK + AF+ + +Y+ ++ GG+L R+ K+
Sbjct: 76 MERDILVE------------VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKE 121
Query: 206 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFI 264
+TE+D + ++ H G+++RD+KPEN L E+ +K TDFGLS + I
Sbjct: 122 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESI 178
Query: 265 KPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
KK G+ Y+APEV+ R+ +S D WS GV+ + +L G PF K
Sbjct: 179 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 238
Query: 324 VLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 362
+L+ K P F +S A+ ++ L ++P RL A
Sbjct: 239 ILKAKLGMPQF-------LSPEAQSLLRMLFKRNPANRLGAG 273
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 34/282 (12%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLK 145
G++K ++ + K+LG G FG ++ + D A+K ++K + +R K
Sbjct: 17 GHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR--DRVRTK 74
Query: 146 MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD 205
M I VE H +VK + AF+ + +Y+ ++ GG+L R+ K+
Sbjct: 75 MERDILVE------------VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKE 120
Query: 206 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFI 264
+TE+D + ++ H G+++RD+KPEN L E+ +K TDFGLS + I
Sbjct: 121 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESI 177
Query: 265 KPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
KK G+ Y+APEV+ R+ +S D WS GV+ + +L G PF K
Sbjct: 178 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
Query: 324 VLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 362
+L+ K P F +S A+ ++ L ++P RL A
Sbjct: 238 ILKAKLGMPQF-------LSPEAQSLLRMLFKRNPANRLGAG 272
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 34/282 (12%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLK 145
G++K ++ + K+LG G FG ++ + D A+K ++K + +R K
Sbjct: 17 GHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR--DRVRTK 74
Query: 146 MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD 205
M I VE H +VK + AF+ + +Y+ ++ GG+L R+ K+
Sbjct: 75 MERDILVE------------VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKE 120
Query: 206 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFI 264
+TE+D + ++ H G+++RD+KPEN L E+ +K TDFGLS + I
Sbjct: 121 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESI 177
Query: 265 KPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
KK G+ Y+APEV+ R+ +S D WS GV+ + +L G PF K
Sbjct: 178 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
Query: 324 VLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 362
+L+ K P F +S A+ ++ L ++P RL A
Sbjct: 238 ILKAKLGMPQF-------LSPEAQSLLRMLFKRNPANRLGAG 272
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 136/281 (48%), Gaps = 25/281 (8%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D ++YT + +G G G Y A D A G VA++++ Q K L I
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ---------QQPKKELIINE 68
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
V RE K + N+V + +++ + +++ ME GG L D + ++ E
Sbjct: 69 ILVMRENK-------NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQ 118
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQ 271
A V R+ L+ H + ++HR++K +N L D S+K TDFG I P + K
Sbjct: 119 IAAVCRECLQALEFLHSNQVIHRNIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRS 175
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
+VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N
Sbjct: 176 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 235
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ P +S +DF+ + L D R +A + + H +++
Sbjct: 236 ELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 49/312 (15%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
Y + +Y + +G G +G Y A D + G VA+K+I + + + I
Sbjct: 15 YFQGLMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDA---------EDEGIPS 64
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
A+ RE+ +L+ L H N+V + + + + E E L ++L + +
Sbjct: 65 TAI----REISLLKELH-HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQ 117
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGK 268
+ + + Q+LR A CH H ++HRD+KP+N L S D +LK DFGL+ F P +
Sbjct: 118 DSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVR 174
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL- 325
+ V + +Y AP+VL +K D+WSIG I ++ G+ F T+D ++
Sbjct: 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFS 234
Query: 326 -------RNKPD--------------FRRKPW----PSISNSAKDFVKKLLVKDPRARLT 360
R P F +KPW P D + +L DP R++
Sbjct: 235 ILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRIS 294
Query: 361 AAQALSHPWVRE 372
A A++HP+ ++
Sbjct: 295 ARDAMNHPYFKD 306
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 49/312 (15%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
Y + +Y + +G G +G Y A D + G VA+K+I + + + I
Sbjct: 15 YFQGLMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDA---------EDEGIPS 64
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
A+ RE+ +L+ L H N+V + + + + E E L ++L + +
Sbjct: 65 TAI----REISLLKELH-HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQ 117
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGK 268
+ + + Q+LR A CH H ++HRD+KP+N L S D +LK DFGL+ F P +
Sbjct: 118 DSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVR 174
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL- 325
+ V + +Y AP+VL +K D+WSIG I ++ G+ F T+D ++
Sbjct: 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFS 234
Query: 326 -------RNKPD--------------FRRKPW----PSISNSAKDFVKKLLVKDPRARLT 360
R P F +KPW P D + +L DP R++
Sbjct: 235 ILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRIS 294
Query: 361 AAQALSHPWVRE 372
A A++HP+ ++
Sbjct: 295 ARDAMNHPYFKD 306
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 130/271 (47%), Gaps = 39/271 (14%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
KLLG G FG + +KA G A+K ++K I+ + V E ++
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK------------DEVAHTLTENRV 204
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVV 216
LQ + H + +F+ + + ME GGEL +R+ ++ +R+ +
Sbjct: 205 LQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI--- 260
Query: 217 VRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQD 272
V+A +LH +V+RD+K EN + +D +K TDFGL + IK G +
Sbjct: 261 ------VSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKT 311
Query: 273 IVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F
Sbjct: 312 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 371
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAA 362
R ++ AK + LL KDP+ RL
Sbjct: 372 PR----TLGPEAKSLLSGLLKKDPKQRLGGG 398
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
IG+L G FG Y A +K A K I+ S ++L ED E+
Sbjct: 17 IGEL---GDFGKVYKAQNKETSVLAAAKVIDTK-------SEEEL--------EDYMVEI 58
Query: 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 219
IL A H N+VK +AF +N ++I +E C GG + D ++ + + TE VV +Q
Sbjct: 59 DIL-ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQ 116
Query: 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--DFIKPGKKFQDIVGSA 277
L H + ++HRD+K N LF D +K DFG+S + ++ +G+
Sbjct: 117 TLDALNYLHDNKIIHRDLKAGNILFTL---DGDIKLADFGVSAKNTRTXIQRRDSFIGTP 173
Query: 278 YYVAPEVLKRKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
Y++APEV+ ++ + +DVWS+G+ + P + + ++ +++P
Sbjct: 174 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT 233
Query: 332 RRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
+P W S++ KDF+KK L K+ AR T +Q L HP+V
Sbjct: 234 LAQPSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 271
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 130/271 (47%), Gaps = 39/271 (14%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
KLLG G FG + +KA G A+K ++K I+ + V E ++
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK------------DEVAHTLTENRV 201
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVV 216
LQ + H + +F+ + + ME GGEL +R+ ++ +R+ +
Sbjct: 202 LQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI--- 257
Query: 217 VRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQD 272
V+A +LH +V+RD+K EN + +D +K TDFGL + IK G +
Sbjct: 258 ------VSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKT 308
Query: 273 IVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F
Sbjct: 309 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 368
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAA 362
R ++ AK + LL KDP+ RL
Sbjct: 369 PR----TLGPEAKSLLSGLLKKDPKQRLGGG 395
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 130/271 (47%), Gaps = 39/271 (14%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
KLLG G FG + +KA G A+K ++K I+ + V E ++
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK------------DEVAHTLTENRV 62
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVV 216
LQ + H + +F+ + + ME GGEL +R+ ++ +R+ +
Sbjct: 63 LQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI--- 118
Query: 217 VRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQD 272
V+A +LH +V+RD+K EN + +D +K TDFGL + IK G +
Sbjct: 119 ------VSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKX 169
Query: 273 IVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 229
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAA 362
R ++ AK + LL KDP+ RL
Sbjct: 230 PR----TLGPEAKSLLSGLLKKDPKQRLGGG 256
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 130/268 (48%), Gaps = 33/268 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
KLLG G FG + +KA G A+K ++K I+ + V E ++
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK------------DEVAHTLTENRV 61
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVV 216
LQ + H + +F+ + + ME GGEL +R+ ++ +R+ A +
Sbjct: 62 LQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY---GAEI 117
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 275
V + + +E +V+RD+K EN + +D +K TDFGL + IK G + G
Sbjct: 118 VSALDYLHSE---KNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCG 171
Query: 276 SAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 172 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR- 230
Query: 335 PWPSISNSAKDFVKKLLVKDPRARLTAA 362
++ AK + LL KDP+ RL
Sbjct: 231 ---TLGPEAKSLLSGLLKKDPKQRLGGG 255
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 130/268 (48%), Gaps = 33/268 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
KLLG G FG + +KA G A+K ++K I+ + V E ++
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK------------DEVAHTLTENRV 63
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVV 216
LQ + H + +F+ + + ME GGEL +R+ ++ +R+ A +
Sbjct: 64 LQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY---GAEI 119
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 275
V + + +E +V+RD+K EN + +D +K TDFGL + IK G + G
Sbjct: 120 VSALDYLHSE---KNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCG 173
Query: 276 SAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR- 232
Query: 335 PWPSISNSAKDFVKKLLVKDPRARLTAA 362
++ AK + LL KDP+ RL
Sbjct: 233 ---TLGPEAKSLLSGLLKKDPKQRLGGG 257
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 142/275 (51%), Gaps = 34/275 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ + K+LG G +G ++ + D K+ K+L + Q K E +
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHD---TGKLYAMKVLKKATIVQKAK-----TTEHTRT 107
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++L+ + +V + AF+ + +++ ++ GGEL + ++ R+TE + + V
Sbjct: 108 ERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYV 165
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIK-PGKKFQDIVG 275
+++ H G+++RD+K EN L S + + TDFGLS +F+ ++ D G
Sbjct: 166 GEIVLALEHLHKLGIIYRDIKLENILLDS---NGHVVLTDFGLSKEFVADETERAYDFCG 222
Query: 276 SAYYVAPEVLKRK-SGPES--DVWSIGVITYILLCGRRPFWDKTEDG-------IFKEVL 325
+ Y+AP++++ SG + D WS+GV+ Y LL G PF T DG I + +L
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF---TVDGEKNSQAEISRRIL 279
Query: 326 RNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 359
+++P P+P +S AKD +++LL+KDP+ RL
Sbjct: 280 KSEP-----PYPQEMSALAKDLIQRLLMKDPKKRL 309
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 34/282 (12%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKILIRVVSFQDLK 145
G +K + + K+LG G FG ++ T +G A+K ++K + +R
Sbjct: 21 GSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVR-------- 72
Query: 146 MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD 205
K E IL A H VVK + AF+ + +Y+ ++ GG+L R+ K+
Sbjct: 73 -----DRVRTKMERDIL-ADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKE 124
Query: 206 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFI 264
+TE+D + ++ H G+++RD+KPEN L E+ +K TDFGLS + I
Sbjct: 125 VMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKEAI 181
Query: 265 KPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
KK G+ Y+APEV+ R+ S D WS GV+ + +L G PF K
Sbjct: 182 DHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTL 241
Query: 324 VLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 362
+L+ K P F +S A+ ++ L ++P RL +
Sbjct: 242 ILKAKLGMPQF-------LSTEAQSLLRALFKRNPANRLGSG 276
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 147/331 (44%), Gaps = 40/331 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ + K+LG G FG ++A K A+K ++K+ +L + VE
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL------------MDDDVECTMV 67
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++L H + + F+ ++ ME GG+L+ I + ++ A
Sbjct: 68 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYA 125
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGS 276
+++ H G+V+RD+K +N L +D +K DFG+ G K + G+
Sbjct: 126 AEIILGLQFLHSKGIVYRDLKLDNILLD---KDGHIKIADFGMCKENMLGDAKTNEFCGT 182
Query: 277 AYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y+APE+L +K D WS GV+ Y +L G+ PF + E+ +F + + P + R
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR-- 240
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQAL-SHPWVREGG----DASEI----------P 380
W + AKD + KL V++P RL + HP RE + EI P
Sbjct: 241 W--LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSP 298
Query: 381 IDISVLNNMRQFVKYSRLKQFALRALASTLD 411
D S N ++F+ FA RAL +++D
Sbjct: 299 FDCS--NFDKEFLNEKPRLXFADRALINSMD 327
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 40/331 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ + K+LG G FG ++A K A+K ++K+ +L + VE
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL------------MDDDVECTMV 66
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++L H + + F+ ++ ME GG+L+ I + ++ A
Sbjct: 67 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYA 124
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGS 276
+++ H G+V+RD+K +N L +D +K DFG+ G K G+
Sbjct: 125 AEIILGLQFLHSKGIVYRDLKLDNILLD---KDGHIKIADFGMCKENMLGDAKTNXFCGT 181
Query: 277 AYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y+APE+L +K D WS GV+ Y +L G+ PF + E+ +F + + P + R
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR-- 239
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQAL-SHPWVREGG----DASEI----------P 380
W + AKD + KL V++P RL + HP RE + EI P
Sbjct: 240 W--LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSP 297
Query: 381 IDISVLNNMRQFVKYSRLKQFALRALASTLD 411
D S N ++F+ FA RAL +++D
Sbjct: 298 FDCS--NFDKEFLNEKPRLSFADRALINSMD 326
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 28/283 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ +Y +G LLG G FG Y ++ VA+K +EK++I D LP
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI-------SDWGE-LPNGTR 57
Query: 154 DVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
V EV +L+ + +G V++ + FE D++V I + +L D I + E+
Sbjct: 58 -VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITER--GALQEE 114
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
A Q+L CH G++HRD+K EN L + LK DFG +K +
Sbjct: 115 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYT 171
Query: 272 DIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E++R +
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQV 225
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 226 FFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 131/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 81
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 82 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIV 138
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L E ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 139 LTFEYLHSLDLIYRDLKPENLLI---DEQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 193
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 248
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 249 SSDLKDLLRNLLQVDLTKRF 268
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 144/312 (46%), Gaps = 33/312 (10%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 5 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 64
Query: 125 AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDN 182
A+K +EK++I D LP V EV +L+ + +G V++ + FE D+
Sbjct: 65 AIKHVEKDRI-------SDWGE-LPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDS 115
Query: 183 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242
+V I +L D I + E+ A Q+L CH G++HRD+K EN
Sbjct: 116 FVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 173
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGV 300
L + LK DFG +K + D G+ Y PE ++ R G + VWS+G+
Sbjct: 174 LIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 230
Query: 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
+ Y ++CG PF D +E++R + FR++ +S+ + ++ L P R T
Sbjct: 231 LLYDMVCGDIPF---EHD---EEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPT 280
Query: 361 AAQALSHPWVRE 372
+ +HPW+++
Sbjct: 281 FEEIQNHPWMQD 292
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 142/362 (39%), Gaps = 95/362 (26%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D+ R+Y + K LG G +G + + D+ G+ VAVKKI +FQ+
Sbjct: 4 DRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD--------AFQN-----ST 50
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDN-----YVYIAMELCEGGELLDRILAKKD 205
+ RE+ IL L+GHEN+V N DN V+ ME + IL
Sbjct: 51 DAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH 110
Query: 206 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---- 261
+Y VV Q+++V H GL+HRDMKP N L + + +K DFGLS
Sbjct: 111 KQY-------VVYQLIKVIKYLHSGGLLHRDMKPSNILLNA---ECHVKVADFGLSRSFV 160
Query: 262 ------------------DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVI 301
+F D V + +Y APE+L K D+WS+G I
Sbjct: 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCI 220
Query: 302 TYILLCGRRPF-----------------WDKTED---------GIFKEVLRNKPDFRR-- 333
+LCG+ F + ED E L+ K + R+
Sbjct: 221 LGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSN 280
Query: 334 ---------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
P + A D + KLL +P R++A AL HP+V + +E
Sbjct: 281 KRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNE 340
Query: 379 IP 380
P
Sbjct: 341 EP 342
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 144/312 (46%), Gaps = 33/312 (10%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 20 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 79
Query: 125 AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDN 182
A+K +EK++I D LP V EV +L+ + +G V++ + FE D+
Sbjct: 80 AIKHVEKDRI-------SDWGE-LPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDS 130
Query: 183 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242
+V I +L D I + E+ A Q+L CH G++HRD+K EN
Sbjct: 131 FVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 188
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGV 300
L + LK DFG +K + D G+ Y PE ++ R G + VWS+G+
Sbjct: 189 LIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 245
Query: 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
+ Y ++CG PF D +E++R + FR++ +S+ + ++ L P R T
Sbjct: 246 LLYDMVCGDIPF---EHD---EEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPT 295
Query: 361 AAQALSHPWVRE 372
+ +HPW+++
Sbjct: 296 FEEIQNHPWMQD 307
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K G+ A+K ++K K++ LK I E E +I
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 95
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 96 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIV 152
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN + + +K TDFG + +K G+ + + G+ Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLA 207
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 262
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 263 SSDLKDLLRNLLQVDLTKRF 282
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 95
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 96 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIV 152
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 207
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 262
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 263 SSDLKDLLRNLLQVDLTKRF 282
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LAGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 143/312 (45%), Gaps = 33/312 (10%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 25 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 84
Query: 125 AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDN 182
A+K +EK++I D LP V EV +L+ + +G V++ + FE D+
Sbjct: 85 AIKHVEKDRI-------SDWGE-LPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDS 135
Query: 183 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242
+V I +L D I + E+ A Q+L CH G++HRD+K EN
Sbjct: 136 FVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 193
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGV 300
L + LK DFG +K + D G+ Y PE ++ R G + VWS+G+
Sbjct: 194 LIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 250
Query: 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
+ Y ++CG PF D +E++R + FR++ +S + ++ L P R T
Sbjct: 251 LLYDMVCGDIPF---EHD---EEIIRGQVFFRQR----VSXECQHLIRWCLALRPSDRPT 300
Query: 361 AAQALSHPWVRE 372
+ +HPW+++
Sbjct: 301 FEEIQNHPWMQD 312
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 132/283 (46%), Gaps = 29/283 (10%)
Query: 98 YTIGKLLGHGQFGYTYVA--TDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+ + ++LG G +G + AN ++ K+ K +++R + +D
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR--NAKD--------TAHT 68
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
K E IL+ + H +V AF+ +Y+ +E GGEL ++ +++ + E A
Sbjct: 69 KAERNILEEVK-HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACF 125
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 274
+ ++ H G+++RD+KPEN + +K TDFGL + I G
Sbjct: 126 YLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHXFC 182
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+ Y+APE+L R + D WS+G + Y +L G PF + ++L+ K +
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP- 241
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVR 371
P ++ A+D +KKLL ++ +RL A + +HP+ R
Sbjct: 242 ---PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K G+ A+K ++K K++ LK I E E +I
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 115
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 116 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIV 172
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 227
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 282
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 283 SSDLKDLLRNLLQVDLTKRF 302
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 132/283 (46%), Gaps = 29/283 (10%)
Query: 98 YTIGKLLGHGQFGYTYVA--TDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+ + ++LG G +G + AN ++ K+ K +++R + +D
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR--NAKD--------TAHT 68
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
K E IL+ + H +V AF+ +Y+ +E GGEL ++ +++ + E A
Sbjct: 69 KAERNILEEVK-HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACF 125
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 274
+ ++ H G+++RD+KPEN + +K TDFGL + I G
Sbjct: 126 YLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHTFC 182
Query: 275 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+ Y+APE+L R + D WS+G + Y +L G PF + ++L+ K +
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP- 241
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVR 371
P ++ A+D +KKLL ++ +RL A + +HP+ R
Sbjct: 242 ---PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 143/312 (45%), Gaps = 33/312 (10%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 20 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 79
Query: 125 AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDN 182
A+K +EK++I D LP V EV +L+ + +G V++ + FE D+
Sbjct: 80 AIKHVEKDRI-------SDWGE-LPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDS 130
Query: 183 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242
+V I +L D I + E+ A Q+L CH G++HRD+K EN
Sbjct: 131 FVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 188
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGV 300
L + LK DFG +K + D G+ Y PE ++ R G + VWS+G+
Sbjct: 189 LIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 245
Query: 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
+ Y ++CG PF D +E++R + FR++ +S + ++ L P R T
Sbjct: 246 LLYDMVCGDIPF---EHD---EEIIRGQVFFRQR----VSXECQHLIRWCLALRPSDRPT 295
Query: 361 AAQALSHPWVRE 372
+ +HPW+++
Sbjct: 296 FEEIQNHPWMQD 307
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K G+ A+K ++K K++ LK I E E +I
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 95
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 96 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIV 152
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 207
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 262
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 263 SSDLKDLLRNLLQVDLTKRF 282
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 33/304 (10%)
Query: 78 GVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKN 132
G PC + G +K+ + +Y +G LLG G FG Y ++ VA+K +EK+
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
Query: 133 KILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMEL 190
+I D LP V EV +L+ + +G V++ + FE D++V I
Sbjct: 61 RI-------SDWGE-LPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 111
Query: 191 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250
+L D I + E+ A Q+L CH G++HRD+K EN L +
Sbjct: 112 EPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-- 167
Query: 251 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG 308
LK DFG +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG
Sbjct: 168 GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
Query: 309 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
PF D +E++R + FR++ +S+ + ++ L P R T + +HP
Sbjct: 227 DIPF---EHD---EEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHP 276
Query: 369 WVRE 372
W+++
Sbjct: 277 WMQD 280
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LXGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K G+ A+K ++K K++ LK I E E +I
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 87
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 88 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIV 144
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 199
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 254
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 255 SSDLKDLLRNLLQVDLTKRF 274
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 128/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 115
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 116 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIV 172
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K + G+ Y+A
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGAT--WTLCGTPEYLA 227
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 282
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 283 SSDLKDLLRNLLQVDLTKRF 302
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 147/292 (50%), Gaps = 35/292 (11%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+D++ YTIG G +G K++G + K+++ S + + + ++
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKELDYG-------SMTEAEKQMLVS 54
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRIL-AKKDSRY 208
++ RE+K H N+V++Y+ D + +YI ME CEGG+L I K+ +Y
Sbjct: 55 EVNLLRELK-------HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 209 TEKDAAV-VVRQMLRVAAECHL-----HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 262
+++ + V+ Q+ ECH H ++HRD+KP N +F K++ +K DFGL+
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLAR 164
Query: 263 FIKPGKKF-QDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGI 320
+ + F ++ VG+ YY++PE + R S E SD+WS+G + Y L PF ++ +
Sbjct: 165 ILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
Query: 321 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
++ K FRR P+ S+ + + ++L R + + L +P + E
Sbjct: 225 AGKIREGK--FRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K G+ A+K ++K K++ LK I E E +I
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 95
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 96 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIV 152
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 207
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 262
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 263 SSDLKDLLRNLLQVDLTKRF 282
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K G+ A+K ++K K++ LK I E E +I
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 95
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 96 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIV 152
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 207
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 262
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 263 SSDLKDLLRNLLQVDLTKRF 282
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 28/283 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ +Y +G LLG G FG Y ++ VA+K +EK++I D LP
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI-------SDWGE-LPNGTR 56
Query: 154 DVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
V EV +L+ + +G V++ + FE D++V I +L D I + E+
Sbjct: 57 -VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEE 113
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
A Q+L CH G++HRD+K EN L + LK DFG +K +
Sbjct: 114 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYT 170
Query: 272 DIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E++R +
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQV 224
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 225 FFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 28/283 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ +Y +G LLG G FG Y ++ VA+K +EK++I D LP
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI-------SDWGE-LPNGTR 57
Query: 154 DVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
V EV +L+ + +G V++ + FE D++V I +L D I + E+
Sbjct: 58 -VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEE 114
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
A Q+L CH G++HRD+K EN L + LK DFG +K +
Sbjct: 115 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYT 171
Query: 272 DIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E++R +
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQV 225
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 226 FFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 28/283 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ +Y +G LLG G FG Y ++ VA+K +EK++I D LP
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI-------SDWGE-LPNGTR 58
Query: 154 DVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
V EV +L+ + +G V++ + FE D++V I +L D I + E+
Sbjct: 59 -VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEE 115
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
A Q+L CH G++HRD+K EN L + LK DFG +K +
Sbjct: 116 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYT 172
Query: 272 DIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E++R +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQV 226
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 227 FFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 28/283 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ +Y +G LLG G FG Y ++ VA+K +EK++I D LP
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI-------SDWGE-LPNGTR 58
Query: 154 DVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
V EV +L+ + +G V++ + FE D++V I +L D I + E+
Sbjct: 59 -VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEE 115
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
A Q+L CH G++HRD+K EN L + LK DFG +K +
Sbjct: 116 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYT 172
Query: 272 DIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E++R +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQV 226
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 227 FFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 130/255 (50%), Gaps = 27/255 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKD 354
S+ KD ++ LL D
Sbjct: 262 SSDLKDLLRNLLQVD 276
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 28/283 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ +Y +G LLG G FG Y ++ VA+K +EK++I D LP
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI-------SDWGE-LPNGTR 58
Query: 154 DVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
V EV +L+ + +G V++ + FE D++V I +L D I + E+
Sbjct: 59 -VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEE 115
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
A Q+L CH G++HRD+K EN L + LK DFG +K +
Sbjct: 116 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYT 172
Query: 272 DIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E++R +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQV 226
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 227 FFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 28/283 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ +Y +G LLG G FG Y ++ VA+K +EK++I D LP
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI-------SDWGE-LPNGTR 72
Query: 154 DVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
V EV +L+ + +G V++ + FE D++V I +L D I + E+
Sbjct: 73 -VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEE 129
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
A Q+L CH G++HRD+K EN L + LK DFG +K +
Sbjct: 130 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYT 186
Query: 272 DIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E++R +
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQV 240
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 241 FFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 115
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R+ E A Q++
Sbjct: 116 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIV 172
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 227
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 282
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 283 SSDLKDLLRNLLQVDLTKRF 302
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R+ E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFAEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 28/283 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ +Y +G LLG G FG Y ++ VA+K +EK++I D LP
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI-------SDWGE-LPNGTR 53
Query: 154 DVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
V EV +L+ + +G V++ + FE D++V I +L D I + E+
Sbjct: 54 -VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEE 110
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
A Q+L CH G++HRD+K EN L + LK DFG +K +
Sbjct: 111 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYT 167
Query: 272 DIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E++R +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQV 221
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 222 FFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R+ E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 89
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R+ E A Q++
Sbjct: 90 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIV 146
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 147 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 201
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 256
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 257 SSDLKDLLRNLLQVDLTKRF 276
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 28/283 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ +Y +G LLG G FG Y ++ VA+K +EK++I D LP
Sbjct: 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI-------SDWGE-LPNGTR 92
Query: 154 DVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
V EV +L+ + +G V++ + FE D++V I +L D I + E+
Sbjct: 93 -VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEE 149
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
A Q+L CH G++HRD+K EN L + LK DFG +K +
Sbjct: 150 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYT 206
Query: 272 DIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E++R +
Sbjct: 207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQV 260
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 261 FFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R+ E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R+ E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 133/283 (46%), Gaps = 28/283 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ +Y +G LLG G FG Y ++ VA+K +EK++I D LP
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI-------SDWGE-LPNGTR 53
Query: 154 DVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
V EV +L+ + +G V++ + FE D++V I +L D I + E+
Sbjct: 54 -VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEE 110
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
A Q+L CH G++HRD+K EN L + LK DFG +K +
Sbjct: 111 LARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYT 167
Query: 272 DIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E++R +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQV 221
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
FR++ +S + ++ L P R T + +HPW+++
Sbjct: 222 FFRQR----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K G+ A+K ++K K++ LK I E E +I
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 87
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R+ E A Q++
Sbjct: 88 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIV 144
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 199
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 254
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 255 SSDLKDLLRNLLQVDLTKRF 274
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 131/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN + + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLII---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 141/304 (46%), Gaps = 33/304 (10%)
Query: 78 GVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKN 132
G PC + G +K+ + +Y +G LLG G FG Y ++ VA+K +EK+
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
Query: 133 KILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMEL 190
+I D LP V EV +L+ + +G V++ + FE D++V I
Sbjct: 61 RI-------SDWGE-LPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 111
Query: 191 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250
+L D I + E+ A Q+L CH G++HRD+K EN L +
Sbjct: 112 EPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-- 167
Query: 251 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG 308
LK DFG +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG
Sbjct: 168 GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
Query: 309 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
PF D +E++R + FR++ +S + ++ L P R T + +HP
Sbjct: 227 DIPF---EHD---EEIIRGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEIQNHP 276
Query: 369 WVRE 372
W+++
Sbjct: 277 WMQD 280
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K VV ++ +E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQK----VVKLKE--------IEHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN + + +K TDFGL+ +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGLAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 145/292 (49%), Gaps = 35/292 (11%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+D++ YTIG G +G K++G + K+++ S + + + ++
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKELDYG-------SMTEAEKQMLVS 54
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRIL-AKKDSRY 208
++ RE+K H N+V++Y+ D + +YI ME CEGG+L I K+ +Y
Sbjct: 55 EVNLLRELK-------HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 209 TEKDAAV-VVRQMLRVAAECHL-----HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 262
+++ + V+ Q+ ECH H ++HRD+KP N +F K++ +K DFGL+
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLAR 164
Query: 263 FIKPGKKF-QDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGI 320
+ F + VG+ YY++PE + R S E SD+WS+G + Y L PF ++ +
Sbjct: 165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
Query: 321 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
++ K FRR P+ S+ + + ++L R + + L +P + E
Sbjct: 225 AGKIREGK--FRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 133/297 (44%), Gaps = 52/297 (17%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + +++G G A ++VA+K+I K +++++ +
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--------------QTSMDELLK 62
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD---RILAK---KDSRYTEK 211
E++ + H N+V +Y +F + +++ M+L GG +LD I+AK K E
Sbjct: 63 EIQAMSQ-CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 121
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG---- 267
A ++R++L H +G +HRD+K N L ED S++ DFG+S F+ G
Sbjct: 122 TIATILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDIT 178
Query: 268 --KKFQDIVGSAYYVAPEVLKRKSGPE--SDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
K + VG+ ++APEV+++ G + +D+WS G+ L G P+ +
Sbjct: 179 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML 238
Query: 324 VLRNKPDFRRKPWPSISNSAKD-------------FVKKLLVKDPRARLTAAQALSH 367
L+N P PS+ +D + L KDP R TAA+ L H
Sbjct: 239 TLQNDP-------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 141/304 (46%), Gaps = 33/304 (10%)
Query: 78 GVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKN 132
G PC + G +K+ + +Y +G LLG G FG Y ++ VA+K +EK+
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
Query: 133 KILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMEL 190
+I D LP V EV +L+ + +G V++ + FE D++V I
Sbjct: 61 RI-------SDWGE-LPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 111
Query: 191 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250
+L D I + E+ A Q+L CH G++HRD+K EN L +
Sbjct: 112 EPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-- 167
Query: 251 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG 308
LK DFG +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG
Sbjct: 168 GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
Query: 309 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
PF D +E++R + FR++ +S + ++ L P R T + +HP
Sbjct: 227 DIPF---EHD---EEIIRGQVFFRQR----VSXECQHLIRWCLALRPXDRPTFEEIQNHP 276
Query: 369 WVRE 372
W+++
Sbjct: 277 WMQD 280
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 125/271 (46%), Gaps = 31/271 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K++G G FG + K+ A+K + K +++ R S
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS-------------AFFW 122
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E + + A A VV+ + AF+DD Y+Y+ ME GG+L++ +++ D EK A
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDV--PEKWARFYT 179
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----KFQDI 273
+++ H G +HRD+KP+N L + LK DFG +K K +
Sbjct: 180 AEVVLALDAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTC--MKMNKEGMVRCDTA 234
Query: 274 VGSAYYVAPEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
VG+ Y++PEVLK + G E D WS+GV Y +L G PF+ + G + +++ +K
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARL 359
IS AK+ + L D RL
Sbjct: 295 NSLTFPDDNDISKEAKNLICAFLT-DREVRL 324
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 122/264 (46%), Gaps = 30/264 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K++G G FG + K+ A+K + K +++ R S
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS-------------AFFW 117
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E + + A A VV+ + AF+DD Y+Y+ ME GG+L++ +++ D EK A
Sbjct: 118 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDV--PEKWARFYT 174
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----KFQDI 273
+++ H G +HRD+KP+N L + LK DFG +K K +
Sbjct: 175 AEVVLALDAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTC--MKMNKEGMVRCDTA 229
Query: 274 VGSAYYVAPEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
VG+ Y++PEVLK + G E D WS+GV Y +L G PF+ + G + +++ +K
Sbjct: 230 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 289
Query: 329 PDFRRKPWPSISNSAKDFVKKLLV 352
IS AK+ + L
Sbjct: 290 NSLTFPDDNDISKEAKNLICAFLT 313
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 133/297 (44%), Gaps = 52/297 (17%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + +++G G A ++VA+K+I K +++++ +
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--------------QTSMDELLK 57
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD---RILAK---KDSRYTEK 211
E++ + H N+V +Y +F + +++ M+L GG +LD I+AK K E
Sbjct: 58 EIQAMSQ-CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 116
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG---- 267
A ++R++L H +G +HRD+K N L ED S++ DFG+S F+ G
Sbjct: 117 TIATILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDIT 173
Query: 268 --KKFQDIVGSAYYVAPEVLKRKSGPE--SDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
K + VG+ ++APEV+++ G + +D+WS G+ L G P+ +
Sbjct: 174 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML 233
Query: 324 VLRNKPDFRRKPWPSISNSAKD-------------FVKKLLVKDPRARLTAAQALSH 367
L+N P PS+ +D + L KDP R TAA+ L H
Sbjct: 234 TLQNDP-------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 283
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 133/283 (46%), Gaps = 28/283 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ +Y +G LLG G FG Y ++ VA+K +EK++I D LP
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI-------SDWGE-LPNGTR 80
Query: 154 DVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
V EV +L+ + +G V++ + FE D++V I +L D I + E+
Sbjct: 81 -VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEE 137
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
A Q+L CH G++HRD+K EN L + LK DFG +K +
Sbjct: 138 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYT 194
Query: 272 DIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E++R +
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQV 248
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
FR++ +S + ++ L P R T + +HPW+++
Sbjct: 249 FFRQR----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 133/283 (46%), Gaps = 28/283 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ +Y +G LLG G FG Y ++ VA+K +EK++I D LP
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI-------SDWGE-LPNGTR 72
Query: 154 DVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
V EV +L+ + +G V++ + FE D++V I +L D I + E+
Sbjct: 73 -VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEE 129
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
A Q+L CH G++HRD+K EN L + LK DFG +K +
Sbjct: 130 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYT 186
Query: 272 DIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E++R +
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQV 240
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
FR++ +S + ++ L P R T + +HPW+++
Sbjct: 241 FFRQR----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 125/271 (46%), Gaps = 31/271 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K++G G FG + K+ A+K + K +++ R S
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS-------------AFFW 122
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E + + A A VV+ + AF+DD Y+Y+ ME GG+L++ +++ D EK A
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDV--PEKWARFYT 179
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----KFQDI 273
+++ H G +HRD+KP+N L + LK DFG +K K +
Sbjct: 180 AEVVLALDAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTC--MKMNKEGMVRCDTA 234
Query: 274 VGSAYYVAPEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
VG+ Y++PEVLK + G E D WS+GV Y +L G PF+ + G + +++ +K
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARL 359
IS AK+ + L D RL
Sbjct: 295 NSLTFPDDNDISKEAKNLICAFLT-DREVRL 324
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 143/312 (45%), Gaps = 33/312 (10%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 6 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 65
Query: 125 AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDN 182
A+K +EK++I D LP V EV +L+ + +G V++ + FE D+
Sbjct: 66 AIKHVEKDRI-------SDWGE-LPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDS 116
Query: 183 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242
+V I +L D I + E+ A Q+L CH G++HRD+K EN
Sbjct: 117 FVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 174
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGV 300
L + LK DFG +K + D G+ Y PE ++ R G + VWS+G+
Sbjct: 175 LIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 231
Query: 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
+ Y ++CG PF + E+ I +V FR++ +S+ + ++ L P R T
Sbjct: 232 LLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR----VSSECQHLIRWCLALRPSDRPT 281
Query: 361 AAQALSHPWVRE 372
+ +HPW+++
Sbjct: 282 FEEIQNHPWMQD 293
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 143/312 (45%), Gaps = 33/312 (10%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 5 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 64
Query: 125 AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDN 182
A+K +EK++I D LP V EV +L+ + +G V++ + FE D+
Sbjct: 65 AIKHVEKDRI-------SDWGE-LPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDS 115
Query: 183 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242
+V I +L D I + E+ A Q+L CH G++HRD+K EN
Sbjct: 116 FVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 173
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGV 300
L + LK DFG +K + D G+ Y PE ++ R G + VWS+G+
Sbjct: 174 LIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 230
Query: 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
+ Y ++CG PF + E+ I +V FR++ +S+ + ++ L P R T
Sbjct: 231 LLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR----VSSECQHLIRWCLALRPSDRPT 280
Query: 361 AAQALSHPWVRE 372
+ +HPW+++
Sbjct: 281 FEEIQNHPWMQD 292
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 145/292 (49%), Gaps = 35/292 (11%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+D++ YTIG G +G K++G + K+++ S + + + ++
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKELDYG-------SMTEAEKQMLVS 54
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRIL-AKKDSRY 208
++ RE+K H N+V++Y+ D + +YI ME CEGG+L I K+ +Y
Sbjct: 55 EVNLLRELK-------HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 209 TEKDAAV-VVRQMLRVAAECHL-----HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 262
+++ + V+ Q+ ECH H ++HRD+KP N +F K++ +K DFGL+
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLAR 164
Query: 263 FIKPGKKF-QDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGI 320
+ F + VG+ YY++PE + R S E SD+WS+G + Y L PF ++ +
Sbjct: 165 ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
Query: 321 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
++ K FRR P+ S+ + + ++L R + + L +P + E
Sbjct: 225 AGKIREGK--FRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 143/312 (45%), Gaps = 33/312 (10%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 5 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 64
Query: 125 AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDN 182
A+K +EK++I D LP V EV +L+ + +G V++ + FE D+
Sbjct: 65 AIKHVEKDRI-------SDWGE-LPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDS 115
Query: 183 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242
+V I +L D I + E+ A Q+L CH G++HRD+K EN
Sbjct: 116 FVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 173
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGV 300
L + LK DFG +K + D G+ Y PE ++ R G + VWS+G+
Sbjct: 174 LIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 230
Query: 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
+ Y ++CG PF + E+ I +V FR++ +S+ + ++ L P R T
Sbjct: 231 LLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR----VSSECQHLIRWCLALRPSDRPT 280
Query: 361 AAQALSHPWVRE 372
+ +HPW+++
Sbjct: 281 FEEIQNHPWMQD 292
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 143/312 (45%), Gaps = 33/312 (10%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 6 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 65
Query: 125 AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDN 182
A+K +EK++I D LP V EV +L+ + +G V++ + FE D+
Sbjct: 66 AIKHVEKDRI-------SDWGE-LPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDS 116
Query: 183 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242
+V I +L D I + E+ A Q+L CH G++HRD+K EN
Sbjct: 117 FVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 174
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGV 300
L + LK DFG +K + D G+ Y PE ++ R G + VWS+G+
Sbjct: 175 LIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 231
Query: 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
+ Y ++CG PF + E+ I +V FR++ +S+ + ++ L P R T
Sbjct: 232 LLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR----VSSECQHLIRWCLALRPSDRPT 281
Query: 361 AAQALSHPWVRE 372
+ +HPW+++
Sbjct: 282 FEEIQNHPWMQD 293
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN + + +K TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
P ++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 95
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 96 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIV 152
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWT-LCGTPEYLA 207
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 262
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 263 SSDLKDLLRNLLQVDLTKRF 282
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K VV ++ +E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQK----VVKLKE--------IEHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN + + ++ TDFGL+ +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGLAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 142/312 (45%), Gaps = 33/312 (10%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 6 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 65
Query: 125 AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDN 182
A+K +EK++I D LP V EV +L+ + +G V++ + FE D+
Sbjct: 66 AIKHVEKDRI-------SDWGE-LPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDS 116
Query: 183 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242
+V I +L D I + E+ A Q+L CH G++HRD+K EN
Sbjct: 117 FVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 174
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGV 300
L + LK DFG +K + D G+ Y PE ++ R G + VWS+G+
Sbjct: 175 LIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 231
Query: 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
+ Y ++CG PF + E+ I +V FR++ +S + ++ L P R T
Sbjct: 232 LLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR----VSXECQHLIRWCLALRPSDRPT 281
Query: 361 AAQALSHPWVRE 372
+ +HPW+++
Sbjct: 282 FEEIQNHPWMQD 293
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 80
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 81 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIV 137
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 138 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWT-LCGTPEYLA 192
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 247
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 248 SSDLKDLLRNLLQVDLTKRF 267
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 95
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 96 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIV 152
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 207
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 262
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 263 SSDLKDLLRNLLQVDLTKRF 282
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 142/312 (45%), Gaps = 33/312 (10%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 6 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 65
Query: 125 AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDN 182
A+K +EK++I D LP V EV +L+ + +G V++ + FE D+
Sbjct: 66 AIKHVEKDRI-------SDWGE-LPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDS 116
Query: 183 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242
+V I +L D I + E+ A Q+L CH G++HRD+K EN
Sbjct: 117 FVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 174
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGV 300
L + LK DFG +K + D G+ Y PE ++ R G + VWS+G+
Sbjct: 175 LIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 231
Query: 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
+ Y ++CG PF + E+ I +V FR++ +S + ++ L P R T
Sbjct: 232 LLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR----VSXECQHLIRWCLALRPSDRPT 281
Query: 361 AAQALSHPWVRE 372
+ +HPW+++
Sbjct: 282 FEEIQNHPWMQD 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 142/312 (45%), Gaps = 33/312 (10%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 5 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 64
Query: 125 AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDN 182
A+K +EK++I D LP V EV +L+ + +G V++ + FE D+
Sbjct: 65 AIKHVEKDRI-------SDWGE-LPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDS 115
Query: 183 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242
+V I +L D I + E+ A Q+L CH G++HRD+K EN
Sbjct: 116 FVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 173
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGV 300
L + LK DFG +K + D G+ Y PE ++ R G + VWS+G+
Sbjct: 174 LIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 230
Query: 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
+ Y ++CG PF + E+ I +V FR++ +S + ++ L P R T
Sbjct: 231 LLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR----VSXECQHLIRWCLALRPSDRPT 280
Query: 361 AAQALSHPWVRE 372
+ +HPW+++
Sbjct: 281 FEEIQNHPWMQD 292
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 132/268 (49%), Gaps = 34/268 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRV-AVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ I K++G G FG V K N D+V A+K + K ++L R A
Sbjct: 76 FEILKVIGRGAFGEVAVVKLK-NADKVFAMKILNKWEMLKR-------------AETACF 121
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE + + + + + AF+DDN +Y+ M+ GG+LL +L+K + R E+ A
Sbjct: 122 REERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLL-TLLSKFEDRLPEEMARFY 180
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--IV 274
+ +M+ H VHRD+KP+N L + ++ DFG + Q V
Sbjct: 181 LAEMVIAIDSVHQLHYVHRDIKPDNILMDM---NGHIRLADFGSCLKLMEDGTVQSSVAV 237
Query: 275 GSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
G+ Y++PE+L K + GPE D WS+GV Y +L G PF+ ++ + +++ +K
Sbjct: 238 GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK 297
Query: 329 PDFRRKPWPS----ISNSAKDFVKKLLV 352
F+ +P+ +S +AKD +++L+
Sbjct: 298 ERFQ---FPTQVTDVSENAKDLIRRLIC 322
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 126/269 (46%), Gaps = 27/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K++G G FG + KA+ A+K + K +++ R S
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS-------------AFFW 123
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E + + A A VV+ + AF+DD Y+Y+ ME GG+L++ +++ D EK A
Sbjct: 124 EERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYD--VPEKWAKFYT 180
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI-VG 275
+++ H GL+HRD+KP+N L + LK DFG + G D VG
Sbjct: 181 AEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVHCDTAVG 237
Query: 276 SAYYVAPEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
+ Y++PEVLK + G E D WS+GV + +L G PF+ + G + +++ +K
Sbjct: 238 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNS 297
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARL 359
IS AK+ + L D RL
Sbjct: 298 LCFPEDAEISKHAKNLICAFLT-DREVRL 325
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 137/313 (43%), Gaps = 55/313 (17%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
IGK+ G G +G + ++ G VA+KK ++ +D +I IA+ RE+
Sbjct: 8 IGKI-GEGSYGVVFKCRNRDTGQIVAIKKFLES---------EDDPVIKKIAL----REI 53
Query: 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 219
++L+ L H N+V F +++ E C+ L + L + E + Q
Sbjct: 54 RMLKQLK-HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHE--LDRYQRGVPEHLVKSITWQ 110
Query: 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAY 278
L+ CH H +HRD+KPEN L + S +K DFG + + P + D V + +
Sbjct: 111 TLQAVNFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSDYYDDEVATRW 167
Query: 279 YVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVL-----RN 327
Y +PE+L + GP DVW+IG + LL G P W D + ++ L R+
Sbjct: 168 YRSPELLVGDTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRH 226
Query: 328 KPDFRRKPW-------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
+ F + P+IS A +K L DP RLT Q L HP
Sbjct: 227 QQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHP 286
Query: 369 W---VREGGDASE 378
+ +RE D ++
Sbjct: 287 YFENIREIEDLAK 299
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 128/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R+ E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN + + +K TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 123/278 (44%), Gaps = 41/278 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI-----EKNKILIRVVSFQDLKMILPIAVEDVKRE 158
+GHG FG Y A D N + VA+KK+ + N+ +D+ +E
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-----------------KWQDIIKE 65
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
V+ LQ L H N +++ + ++ ++ ME C G +L E + A V
Sbjct: 66 VRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSA--SDLLEVHKKPLQEVEIAAVTH 122
Query: 219 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 278
L+ A H H ++HRD+K N L E +K DFG + + P F VG+ Y
Sbjct: 123 GALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANXF---VGTPY 176
Query: 279 YVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGIFKEVLRNKPDFR 332
++APEV+ + + + DVWS+G IT I L R+P F ++ P +
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHIAQNESPALQ 235
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
W S ++FV L K P+ R T+ L H +V
Sbjct: 236 SGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 128/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R+ E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 129/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN + + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 128/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R+ E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 128/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 95
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R+ E A Q++
Sbjct: 96 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIV 152
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLA 207
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 262
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 263 SSDLKDLLRNLLQVDLTKRF 282
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 123/278 (44%), Gaps = 41/278 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI-----EKNKILIRVVSFQDLKMILPIAVEDVKRE 158
+GHG FG Y A D N + VA+KK+ + N+ +D+ +E
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-----------------KWQDIIKE 104
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
V+ LQ L H N +++ + ++ ++ ME C G +L E + A V
Sbjct: 105 VRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSA--SDLLEVHKKPLQEVEIAAVTH 161
Query: 219 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 278
L+ A H H ++HRD+K N L E +K DFG + + P F VG+ Y
Sbjct: 162 GALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANXF---VGTPY 215
Query: 279 YVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGIFKEVLRNKPDFR 332
++APEV+ + + + DVWS+G IT I L R+P F ++ P +
Sbjct: 216 WMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHIAQNESPALQ 274
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
W S ++FV L K P+ R T+ L H +V
Sbjct: 275 SGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 135/327 (41%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---------PFEHQTY-----C 67
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL A HEN++ + E VYI +L E L ++L K
Sbjct: 68 QRTLREIKILLAFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 122
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + S LK DFGL+ P
Sbjct: 123 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---SDLKICDFGLARVADPD 179
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDK------ 315
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 180 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 239
Query: 316 -----------TED---GI---FKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
ED GI + L + P + PW P+ + A D + K+L +
Sbjct: 240 NHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 299
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 300 PHKRIEVEQALAHPYLAQYYDPSDEPI 326
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 95
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ + K +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 96 LQAV-NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIV 152
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN + + +K TDFG + +K G+ + + G+ Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLA 207
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 262
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 263 SSDLKDLLRNLLQVDLTKRF 282
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 95
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ + K +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 96 LQAV-NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIV 152
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN + + +K TDFG + +K G+ + + G+ Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLA 207
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 262
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 263 SSDLKDLLRNLLQVDLTKRF 282
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KSQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + EDS LK DFGL +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLCRHTD--DEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + K +G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + ++ TDFG + +K G+ + + G+ +A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEALA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 133/283 (46%), Gaps = 28/283 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ +Y +G LLG G FG Y ++ VA+K +EK++I D LP
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI-------SDWGE-LPNGTR 53
Query: 154 DVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
V EV +L+ + +G V++ + FE D++V I +L D I + E+
Sbjct: 54 -VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEE 110
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
A Q+L CH G++HRD+K EN L + LK DFG +K +
Sbjct: 111 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYT 167
Query: 272 DIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E++ +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIGGQV 221
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 222 FFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 138/320 (43%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 75
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 76 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 130
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + EDS LK DFGL+ +
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLAR--HTDDEM 185
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 246 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 305
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 306 AQALAHAYFAQYHDPDDEPV 325
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 138/321 (42%), Gaps = 59/321 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
+ + Y +G G +G A DK +G++VA+KK+ + FQ I
Sbjct: 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR--------PFQS-----EIFA 67
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYV------YIAMELCEGGELLDRILAKKDS 206
+ RE+ +L+ + HENV+ + F + + Y+ M + L +I+ K
Sbjct: 68 KRAYRELLLLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGLK-- 122
Query: 207 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
++E+ +V QML+ H G+VHRD+KP N + ED LK DFGL+
Sbjct: 123 -FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL---AVNEDCELKILDFGLAR--HA 176
Query: 267 GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR-------------- 310
+ V + +Y APEV+ D+WS+G I +L G+
Sbjct: 177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236
Query: 311 ---------PFWDKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRA 357
F K D K +++ P RK + P S A D ++K+L D
Sbjct: 237 LKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK 296
Query: 358 RLTAAQALSHPWVREGGDASE 378
RLTAAQAL+HP+ D E
Sbjct: 297 RLTAAQALTHPFFEPFRDPEE 317
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 138/320 (43%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 71
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 72 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 126
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + EDS LK DFGL+ +
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLARHTD--DEM 181
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 301
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 302 AQALAHAYFAQYHDPDDEPV 321
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K +G G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + +K DFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 127/260 (48%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 95
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ + K +F+D++ +Y+ ME GGE+ + ++ R+ E A Q++
Sbjct: 96 LQAV-NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYAAQIV 152
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN + + +K TDFG + +K G+ + + G+ Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLA 207
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 262
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 263 SSDLKDLLRNLLQVDLTKRF 282
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR--------PFQSI-----IHAKRTY 75
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 76 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 130
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 185
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 246 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 305
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 306 AQALAHAYFAQYHDPDDEPV 325
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 75
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 76 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 130
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 185
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 246 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 305
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 306 AQALAHAYFAQYHDPDDEPV 325
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ K FQ + I +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSK--------PFQSI-----IHAKRTY 81
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 82 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 136
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 137 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEM 191
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 251
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 252 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 311
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 312 AQALAHAYFAQYHDPDDEPV 331
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 138/320 (43%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR--------PFQSI-----IHAKRTY 65
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K ++ T+
Sbjct: 66 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCAKLTD 120
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 121 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 175
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 236 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 296 AQALAHAYFAQYHDPDDEPV 315
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 59/321 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
+ + Y +G G +G A DK +G++VA+KK+ + FQ I
Sbjct: 39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR--------PFQS-----EIFA 85
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYV------YIAMELCEGGELLDRILAKKDS 206
+ RE+ +L+ + HENV+ + F + + Y+ M + L +I+ +
Sbjct: 86 KRAYRELLLLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGME-- 140
Query: 207 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
++E+ +V QML+ H G+VHRD+KP N + ED LK DFGL+
Sbjct: 141 -FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL---AVNEDCELKILDFGLAR--HA 194
Query: 267 GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR-------------- 310
+ V + +Y APEV+ D+WS+G I +L G+
Sbjct: 195 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 254
Query: 311 ---------PFWDKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRA 357
F K D K +++ P RK + P S A D ++K+L D
Sbjct: 255 LKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK 314
Query: 358 RLTAAQALSHPWVREGGDASE 378
RLTAAQAL+HP+ D E
Sbjct: 315 RLTAAQALTHPFFEPFRDPEE 335
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 179
Query: 271 QDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KXQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KXQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLAR--HTDDEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSR--------PFQSI-----IHAKRTY 79
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 80 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 134
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 135 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 189
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 190 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 249
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 250 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 309
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 310 AQALAHAYFAQYHDPDDEPV 329
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR--------PFQSI-----IHAKRTY 65
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 66 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 120
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 121 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 175
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 176 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 236 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 296 AQALAHAYFAQYHDPDDEPV 315
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR--------PFQSI-----IHAKRTY 65
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 66 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 120
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 121 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 175
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 236 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 296 AQALAHAYFAQYHDPDDEPV 315
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 132/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---------PFEHQTY-----C 67
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL A HEN++ + E VYI +L E L ++L K
Sbjct: 68 QRTLREIKILLAFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 122
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+ P
Sbjct: 123 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPD 179
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 180 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 239
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 240 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 299
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 300 PHKRIEVEQALAHPYLAQYYDPSDEPI 326
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 71
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 72 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 126
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEM 181
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 301
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 302 AQALAHAYFAQYHDPDDEPV 321
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 75
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 76 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 130
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 185
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 246 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 305
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 306 AQALAHAYFAQYHDPDDEPV 325
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 36/273 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR--VVSFQDLKMILPIAVEDV 155
+ I K++G G FG V K A+K + K ++L R F++ + +L V
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL------V 145
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+ + + AL + AF+D+N++Y+ M+ GG+LL +L+K + + E A
Sbjct: 146 NGDCQWITAL---------HYAFQDENHLYLVMDYYVGGDLL-TLLSKFEDKLPEDMARF 195
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--I 273
+ +M+ H VHRD+KP+N L + ++ DFG + Q
Sbjct: 196 YIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV---NGHIRLADFGSCLKMNDDGTVQSSVA 252
Query: 274 VGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327
VG+ Y++PE+L+ K GPE D WS+GV Y +L G PF+ ++ + +++ +
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 312
Query: 328 KPDFRRKPWPS----ISNSAKDFVKKLLVKDPR 356
+ F+ +PS +S AKD +++L+ R
Sbjct: 313 EERFQ---FPSHVTDVSEEAKDLIQRLICSRER 342
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 36/273 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR--VVSFQDLKMILPIAVEDV 155
+ I K++G G FG V K A+K + K ++L R F++ + +L V
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL------V 129
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+ + + AL + AF+D+N++Y+ M+ GG+LL +L+K + + E A
Sbjct: 130 NGDCQWITAL---------HYAFQDENHLYLVMDYYVGGDLL-TLLSKFEDKLPEDMARF 179
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--I 273
+ +M+ H VHRD+KP+N L + ++ DFG + Q
Sbjct: 180 YIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV---NGHIRLADFGSCLKMNDDGTVQSSVA 236
Query: 274 VGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327
VG+ Y++PE+L+ K GPE D WS+GV Y +L G PF+ ++ + +++ +
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 328 KPDFRRKPWPS----ISNSAKDFVKKLLVKDPR 356
+ F+ +PS +S AKD +++L+ R
Sbjct: 297 EERFQ---FPSHVTDVSEEAKDLIQRLICSRER 326
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 71
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 72 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 126
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 181
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 301
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 302 AQALAHAYFAQYHDPDDEPV 321
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 92
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 93 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 147
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 148 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 202
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 203 XGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 262
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 263 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 322
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 323 AQALAHAYFAQYHDPDDEPV 342
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 80
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 81 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 135
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 136 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEM 190
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 191 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 250
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 251 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 310
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 311 AQALAHAYFAQYHDPDDEPV 330
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 92
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 93 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 147
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 148 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEM 202
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 203 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 262
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 263 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 322
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 323 AQALAHAYFAQYHDPDDEPV 342
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 74
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 75 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 129
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 130 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 184
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 244
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 245 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 304
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 305 AQALAHAYFAQYHDPDDEPV 324
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 126/262 (48%), Gaps = 23/262 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K++G G FG +A KA AVK ++K IL + ++ K I+ E +
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKK----KEEKHIM--------SERNV 91
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L H +V + +F+ + +Y ++ GGEL + +++ + E A ++
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL--QRERCFLEPRARFYAAEIA 149
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYV 280
H +V+RD+KPEN L S + TDFGL + I+ G+ Y+
Sbjct: 150 SALGYLHSLNIVYRDLKPENILLDS---QGHIVLTDFGLCKENIEHNSTTSTFCGTPEYL 206
Query: 281 APEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APEVL ++ + D W +G + Y +L G PF+ + ++ +L NKP + K P+I
Sbjct: 207 APEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL-NKP-LQLK--PNI 262
Query: 340 SNSAKDFVKKLLVKDPRARLTA 361
+NSA+ ++ LL KD RL A
Sbjct: 263 TNSARHLLEGLLQKDRTKRLGA 284
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 128/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K +G G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GG++ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + +K DFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 81
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 82 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 136
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 137 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEM 191
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 251
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 252 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 311
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 312 AQALAHAYFAQYHDPDDEPV 331
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 81
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 82 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 136
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 137 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEM 191
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 251
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 252 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 311
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 312 AQALAHAYFAQYHDPDDEPV 331
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 68
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 69 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 123
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 124 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 178
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 179 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 238
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 239 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 298
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 299 AQALAHAYFAQYHDPDDEPV 318
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 128/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
+ LG G FG + K G+ A+K ++K K++ LK I E E +I
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 95
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
QA+ +VK +F+D++ +Y+ +E GGE+ + ++ R++E A Q++
Sbjct: 96 QQAV-NFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIV 152
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + +K DFG + +K G+ + + G+ Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLA 207
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 262
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 263 SSDLKDLLRNLLQVDLTKRF 282
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 80
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 81 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 135
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 136 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLARHTD--DEM 190
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 191 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 250
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 251 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 310
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 311 AQALAHAYFAQYHDPDDEPV 330
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 71
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 72 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 126
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEM 181
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 301
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 302 AQALAHAYFAQYHDPDDEPV 321
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 128/260 (49%), Gaps = 27/260 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K +G G FG + G+ A+K ++K K++ LK I E E +I
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-------KLKQI-----EHTLNEKRI 94
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQA+ +VK +F+D++ +Y+ ME GG++ + ++ R++E A Q++
Sbjct: 95 LQAV-NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIV 151
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H L++RD+KPEN L + +K DFG + +K G+ + + G+ Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLA 206
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 339
PE++ K ++ D W++GV+ Y + G PF+ I+++++ K F PS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHF 261
Query: 340 SNSAKDFVKKLLVKDPRARL 359
S+ KD ++ LL D R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 131/309 (42%), Gaps = 62/309 (20%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG+G + Y +K G VA+K+++ D + P RE+ +++
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVK-----------LDSEEGTP---STAIREISLMK 58
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVVVR-QM 220
L HEN+V+ Y+ +N + + E + + +D R E + + Q+
Sbjct: 59 ELK-HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 279
L+ A CH + ++HRD+KP+N L + LK DFGL+ F P F V + +Y
Sbjct: 118 LQGLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWY 174
Query: 280 VAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP-- 335
AP+VL R D+WS G I ++ G +P + T D +E L+ D P
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITG-KPLFPGTND---EEQLKLIFDIMGTPNE 230
Query: 336 --WPSISNSAK------------------------------DFVKKLLVKDPRARLTAAQ 363
WPS++ K DF+ LL +P RL+A Q
Sbjct: 231 SLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQ 290
Query: 364 ALSHPWVRE 372
AL HPW E
Sbjct: 291 ALHHPWFAE 299
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 66
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 67 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 121
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 122 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 176
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 177 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 236
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 237 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 296
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 297 AQALAHAYFAQYHDPDDEPV 316
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 66
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 67 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 121
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 122 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 176
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 177 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 236
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 237 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 296
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 297 AQALAHAYFAQYHDPDDEPV 316
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 65
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 66 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 120
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 121 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 175
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 236 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 296 AQALAHAYFAQYHDPDDEPV 315
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 67
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 68 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 122
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 123 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEM 177
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 178 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 237
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 238 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 297
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 298 AQALAHAYFAQYHDPDDEPV 317
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 134/313 (42%), Gaps = 69/313 (22%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + + LG G++ + A + N ++V VK ++ P+ +KR
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVK------------------ILKPVKKNKIKR 80
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKD 212
E+KIL+ L G N++ + +D + L+ + D + T+ D
Sbjct: 81 EIKILENLRGGPNIITLADIVKD--------PVSRTPALVFEHVNNTDFKQLYQTLTDYD 132
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+++
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 273 IVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW----------------- 313
V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 250
Query: 314 -DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLVKDPR 356
+ D I K + P F RK W +S A DF+ KLL D +
Sbjct: 251 TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQ 310
Query: 357 ARLTAAQALSHPW 369
+RLTA +A+ HP+
Sbjct: 311 SRLTAREAMEHPY 323
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 132/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---------PFEHQTY-----C 65
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 66 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 120
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + + LK DFGL+ P
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPD 177
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 178 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 238 NHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 297
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 298 PHKRIEVEQALAHPYLEQYYDPSDEPI 324
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 132/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---------PFEHQTY-----C 65
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 66 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 120
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + + LK DFGL+ P
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPD 177
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 178 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 238 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 297
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 298 PHKRIEVEQALAHPYLEQYYDPSDEPI 324
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 48/294 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K+LG+G G T V G VAVK++ ++ F D+ ++ E+K+
Sbjct: 39 KILGYGSSG-TVVFQGSFQGRPVAVKRM--------LIDFCDIALM----------EIKL 79
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT-----EKDAAVV 216
L H NV+++Y + D ++YIA+ELC L D + +K S E + +
Sbjct: 80 LTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISL 138
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLF----------KSAKEDSSLKATDFGLSDFIKP 266
+RQ+ A H ++HRD+KP+N L ++ E+ + +DFGL +
Sbjct: 139 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 267 GK-----KFQDIVGSAYYVAPEVL----KRKSGPESDVWSIG-VITYILLCGRRPFWDKT 316
G+ + G++ + APE+L KR+ D++S+G V YIL G+ PF DK
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 258
Query: 317 --EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
E I + + + + + S+ A D + +++ DP R TA + L HP
Sbjct: 259 SRESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 48/294 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K+LG+G G T V G VAVK++ ++ F D+ ++ E+K+
Sbjct: 39 KILGYGSSG-TVVFQGSFQGRPVAVKRM--------LIDFCDIALM----------EIKL 79
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT-----EKDAAVV 216
L H NV+++Y + D ++YIA+ELC L D + +K S E + +
Sbjct: 80 LTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISL 138
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLF----------KSAKEDSSLKATDFGLSDFIKP 266
+RQ+ A H ++HRD+KP+N L ++ E+ + +DFGL +
Sbjct: 139 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 267 GK-----KFQDIVGSAYYVAPEVL----KRKSGPESDVWSIG-VITYILLCGRRPFWDKT 316
G+ + G++ + APE+L KR+ D++S+G V YIL G+ PF DK
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 258
Query: 317 --EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
E I + + + + + S+ A D + +++ DP R TA + L HP
Sbjct: 259 SRESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 57
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L D + A + + Q+L+
Sbjct: 58 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KPEN L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 28 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---------PFEHQTY-----C 73
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 74 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 128
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+ P
Sbjct: 129 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPD 185
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 186 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 245
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 246 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 305
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 306 PHKRIEVEQALAHPYLEQYYDPSDEPI 332
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---------PFEHQTY-----C 65
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 66 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 120
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+ P
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPD 177
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 178 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 238 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 297
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 298 PHKRIEVEQALAHPYLEQYYDPSDEPI 324
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G FG + +G + +K+I +++ + E+ +REV +L
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK-------------EREESRREVAVLA 78
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ H N+V++ +FE++ +YI M+ CEGG+L RI A+K + E Q+
Sbjct: 79 NMK-HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA 137
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAP 282
H ++HRD+K +N +D +++ DFG++ + + + +G+ YY++P
Sbjct: 138 LKHVHDRKILHRDIKSQNIFL---TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSP 194
Query: 283 EVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-- 339
E+ + K +SD+W++G + Y L + F + + +++ +P +
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS-------FPPVSL 247
Query: 340 --SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
S + V +L ++PR R + L ++
Sbjct: 248 HYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFI 280
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 140/329 (42%), Gaps = 69/329 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D G VAVKK+ + FQ+ +
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR--------PFQN-----QTHAKRA 68
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L+ + H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 69 YRELVLLKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIHMELD---- 122
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 123 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTASTNFM 179
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I L+ G F W+K + +
Sbjct: 180 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQL 239
Query: 321 ----------FKEVLRNKPDFRRKPWPSI---------------------SNSAKDFVKK 349
+ +RN + R +P I ++ A+D + K
Sbjct: 240 GTPSAEFMAALQPTVRNYVE-NRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSK 298
Query: 350 LLVKDPRARLTAAQALSHPWVREGGDASE 378
+LV DP R++ +AL HP++ D +E
Sbjct: 299 MLVIDPDKRISVDEALRHPYITVWYDPAE 327
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 58/324 (17%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 61
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 62 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRV-ARH 111
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 112 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGS 169
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 170 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 230 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 289
Query: 354 DPRARLTAAQALSHPWVREGGDAS 377
P ARLT +A +H + E D +
Sbjct: 290 TPTARLTPLEACAHSFFDELRDPN 313
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK D+GL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDYGLAR--HTDDEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---------PFEHQTY-----C 65
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 66 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 120
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+ P
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPD 177
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 178 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 238 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 297
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 298 PHKRIEVEQALAHPYLEQYYDPSDEPI 324
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 134/289 (46%), Gaps = 39/289 (13%)
Query: 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKM 146
D+ YD++ DR +LG G +G Y D +N R+A+K+I + +D +
Sbjct: 18 DYEYDENGDRV-----VLGKGTYGIVYAGRDLSNQVRIAIKEIPE----------RDSRY 62
Query: 147 ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS 206
P+ E+ + + L H+N+V++ +F ++ ++ I ME GG L + +K
Sbjct: 63 SQPL-----HEEIALHKHLK-HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGP 116
Query: 207 -RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD--- 262
+ E+ +Q+L H + +VHRD+K +N L + LK +DFG S
Sbjct: 117 LKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTY--SGVLKISDFGTSKRLA 174
Query: 263 FIKPGKKFQDIVGSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFWDKTED- 318
I P + G+ Y+APE++ R G +D+WS+G + G+ PF++ E
Sbjct: 175 GINPCT--ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ 232
Query: 319 -GIFK-EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365
+FK + + P+ S+S AK F+ K DP R A L
Sbjct: 233 AAMFKVGMFKVHPEIPE----SMSAEAKAFILKCFEPDPDKRACANDLL 277
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---------PFEHQTY-----C 85
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 86 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 140
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+ P
Sbjct: 141 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPD 197
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 198 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 257
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 258 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 317
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 318 PHKRIEVEQALAHPYLEQYYDPSDEPI 344
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 132/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---------PFEHQTY-----C 65
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 66 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 120
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + + LK DFGL+ P
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLARVADPD 177
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 178 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 238 NHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 297
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 298 PHKRIEVEQALAHPYLEQYYDPSDEPI 324
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 58/324 (17%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ + K +F++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK------AFKN----- 61
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 62 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 111
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 112 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGS 169
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 170 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 230 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 289
Query: 354 DPRARLTAAQALSHPWVREGGDAS 377
P ARLT +A +H + E D +
Sbjct: 290 TPTARLTPLEACAHSFFDELRDPN 313
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---------PFEHQTY-----C 67
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 68 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 122
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+ P
Sbjct: 123 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPD 179
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 180 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 239
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 240 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 299
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 300 PHKRIEVEQALAHPYLEQYYDPSDEPI 326
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 132/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---------PFEHQTY-----C 69
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 70 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 124
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + + LK DFGL+ P
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPD 181
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 242 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 301
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 302 PHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 58/324 (17%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ + K +F++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK------AFKN----- 61
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 62 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 111
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 112 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGS 169
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 170 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 230 DQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 289
Query: 354 DPRARLTAAQALSHPWVREGGDAS 377
P ARLT +A +H + E D +
Sbjct: 290 TPTARLTPLEACAHSFFDELRDPN 313
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 141/319 (44%), Gaps = 58/319 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 47 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 95
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 96 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 145
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 146 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGS 203
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 204 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 263
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 264 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 323
Query: 354 DPRARLTAAQALSHPWVRE 372
P ARLT +A +H + E
Sbjct: 324 TPTARLTPLEACAHSFFDE 342
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 58/324 (17%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 61
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 62 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 111
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 112 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGS 169
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 170 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 230 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 289
Query: 354 DPRARLTAAQALSHPWVREGGDAS 377
P ARLT +A +H + E D +
Sbjct: 290 TPTARLTPLEACAHSFFDELRDPN 313
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 127/308 (41%), Gaps = 70/308 (22%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A + G+ A+KKI K + S RE+ IL+
Sbjct: 10 IGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPS-------------TTIREISILK 55
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAME-----------LCEGGELLDRILAKKDSRYTEKD 212
L H N+VK Y+ + + E +CEGG L+ + AK
Sbjct: 56 ELK-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKS-------- 104
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQ 271
+ Q+L A CH ++HRD+KP+N L E LK DFGL+ F P +K+
Sbjct: 105 ---FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYT 158
Query: 272 DIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
V + +Y AP+VL +K D+WS+G I ++ G F +E + R
Sbjct: 159 HEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILG 218
Query: 330 DFRRKPWPSISN-------------------------SAKDFVKKLLVKDPRARLTAAQA 364
K WP+++ S D + K+L DP R+TA QA
Sbjct: 219 TPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
Query: 365 LSHPWVRE 372
L H + +E
Sbjct: 279 LEHAYFKE 286
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---------PFEHQTY-----C 69
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 70 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 124
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+ P
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPD 181
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 182 HDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 242 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 301
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 302 PHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---------PFEHQTY-----C 70
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 71 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 125
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+ P
Sbjct: 126 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPD 182
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 183 HDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 242
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 243 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 302
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 303 PHKRIEVEQALAHPYLEQYYDPSDEPI 329
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 58/324 (17%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 25 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 73
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 74 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 123
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 124 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGS 181
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 182 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 241
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 242 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 301
Query: 354 DPRARLTAAQALSHPWVREGGDAS 377
P ARLT +A +H + E D +
Sbjct: 302 TPTARLTPLEACAHSFFDELRDPN 325
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---------PFEH-----QTYC 63
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 64 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 118
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+ P
Sbjct: 119 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPD 175
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 176 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 235
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 236 NHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 295
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 296 PHKRIEVEQALAHPYLEQYYDPSDEPI 322
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 141/319 (44%), Gaps = 58/319 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 47 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 95
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 96 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 145
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 146 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGS 203
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 204 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 263
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 264 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 323
Query: 354 DPRARLTAAQALSHPWVRE 372
P ARLT +A +H + E
Sbjct: 324 TPTARLTPLEACAHSFFDE 342
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 58/324 (17%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 26 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 74
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 75 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 124
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 125 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGS 182
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 183 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 242
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 243 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 302
Query: 354 DPRARLTAAQALSHPWVREGGDAS 377
P ARLT +A +H + E D +
Sbjct: 303 TPTARLTPLEACAHSFFDELRDPN 326
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 141/319 (44%), Gaps = 58/319 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 49 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 97
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 98 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 147
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 148 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGS 205
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 206 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 265
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 266 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 325
Query: 354 DPRARLTAAQALSHPWVRE 372
P ARLT +A +H + E
Sbjct: 326 TPTARLTPLEACAHSFFDE 344
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 147/366 (40%), Gaps = 81/366 (22%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFG 110
H QER Y+Q K + R Q + P G G +G
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYG 56
Query: 111 YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170
A D G RVAVKK+ + FQ + I + RE+++L+ + HEN
Sbjct: 57 SVCAAFDTKTGHRVAVKKLSR--------PFQSI-----IHAKRTYRELRLLKHMK-HEN 102
Query: 171 VVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 224
V+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGL 158
Query: 225 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 284
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE+
Sbjct: 159 KYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEI 213
Query: 285 LKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP----------- 329
+ D+WS+G I LL GR F K +LR P
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 330 -------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375
+ P + +N A D ++K+LV D R+TAAQAL+H + + D
Sbjct: 274 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
Query: 376 ASEIPI 381
+ P+
Sbjct: 334 PDDEPV 339
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---------PFEH-----QTYC 63
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 64 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 118
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+ P
Sbjct: 119 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPD 175
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 176 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 235
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 236 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 295
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 296 PHKRIEVEQALAHPYLEQYYDPSDEPI 322
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 132/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---------PFEHQTY-----X 69
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 70 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 124
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + + LK DFGL+ P
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPD 181
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 242 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 301
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 302 PHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 141/319 (44%), Gaps = 58/319 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 41 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 89
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 90 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 139
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 140 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGS 197
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 198 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 257
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 258 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 317
Query: 354 DPRARLTAAQALSHPWVRE 372
P ARLT +A +H + E
Sbjct: 318 TPTARLTPLEACAHSFFDE 336
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---------PFEHQTY-----C 70
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 71 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 125
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+ P
Sbjct: 126 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPD 182
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 183 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 242
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 243 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 302
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 303 PHKRIEVEQALAHPYLEQYYDPSDEPI 329
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 26 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---------PFEHQTY-----C 71
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 72 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 126
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+ P
Sbjct: 127 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPD 183
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 184 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 243
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 244 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 303
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 304 PHKRIEVEQALAHPYLEQYYDPSDEPI 330
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 17 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---------PFEHQTY-----C 62
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 63 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 117
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+ P
Sbjct: 118 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPD 174
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 175 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 234
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 235 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 294
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 295 PHKRIEVEQALAHPYLEQYYDPSDEPI 321
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---------PFEHQTY-----C 69
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 70 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 124
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+ P
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPD 181
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 242 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 301
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 302 PHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 58/324 (17%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 61
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 62 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 111
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 112 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGS 169
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 170 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 230 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 289
Query: 354 DPRARLTAAQALSHPWVREGGDAS 377
P ARLT +A +H + E D +
Sbjct: 290 TPTARLTPLEACAHSFFDELRDPN 313
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 141/319 (44%), Gaps = 58/319 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 18 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 66
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 67 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 116
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 117 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGS 174
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 175 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 234
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 235 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 294
Query: 354 DPRARLTAAQALSHPWVRE 372
P ARLT +A +H + E
Sbjct: 295 TPTARLTPLEACAHSFFDE 313
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 58/324 (17%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 61
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 62 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 111
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 112 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGS 169
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 170 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 230 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 289
Query: 354 DPRARLTAAQALSHPWVREGGDAS 377
P ARLT +A +H + E D +
Sbjct: 290 TPTARLTPLEACAHSFFDELRDPN 313
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 58/324 (17%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 14 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 62
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 63 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 112
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 113 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGS 170
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 171 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 230
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 231 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 290
Query: 354 DPRARLTAAQALSHPWVREGGDAS 377
P ARLT +A +H + E D +
Sbjct: 291 TPTARLTPLEACAHSFFDELRDPN 314
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 134/289 (46%), Gaps = 39/289 (13%)
Query: 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKM 146
D+ YD++ DR +LG G +G Y D +N R+A+K+I + +D +
Sbjct: 4 DYEYDENGDRV-----VLGKGTYGIVYAGRDLSNQVRIAIKEIPE----------RDSRY 48
Query: 147 ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS 206
P+ E+ + + L H+N+V++ +F ++ ++ I ME GG L + +K
Sbjct: 49 SQPL-----HEEIALHKHLK-HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGP 102
Query: 207 -RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD--- 262
+ E+ +Q+L H + +VHRD+K +N L + LK +DFG S
Sbjct: 103 LKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTY--SGVLKISDFGTSKRLA 160
Query: 263 FIKPGKKFQDIVGSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFWDKTED- 318
I P + G+ Y+APE++ R G +D+WS+G + G+ PF++ E
Sbjct: 161 GINPCT--ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ 218
Query: 319 -GIFK-EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365
+FK + + P+ S+S AK F+ K DP R A L
Sbjct: 219 AAMFKVGMFKVHPEIPE----SMSAEAKAFILKCFEPDPDKRACANDLL 263
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 58/324 (17%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 21 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 69
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 70 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 119
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 120 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGS 177
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 178 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 237
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 238 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 297
Query: 354 DPRARLTAAQALSHPWVREGGDAS 377
P ARLT +A +H + E D +
Sbjct: 298 TPTARLTPLEACAHSFFDELRDPN 321
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 141/319 (44%), Gaps = 58/319 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 92 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 140
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 141 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 190
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 191 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGS 248
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 249 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 308
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 309 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 368
Query: 354 DPRARLTAAQALSHPWVRE 372
P ARLT +A +H + E
Sbjct: 369 TPTARLTPLEACAHSFFDE 387
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 58/324 (17%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 17 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 65
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 66 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 115
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 116 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGS 173
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 174 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 233
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 234 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 293
Query: 354 DPRARLTAAQALSHPWVREGGDAS 377
P ARLT +A +H + E D +
Sbjct: 294 TPTARLTPLEACAHSFFDELRDPN 317
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 141/319 (44%), Gaps = 58/319 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 51 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 99
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 100 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 149
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 150 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGS 207
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 208 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 267
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 268 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 327
Query: 354 DPRARLTAAQALSHPWVRE 372
P ARLT +A +H + E
Sbjct: 328 TPTARLTPLEACAHSFFDE 346
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 147/366 (40%), Gaps = 81/366 (22%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFG 110
H QER Y+Q K + R Q + P G G +G
Sbjct: 19 HMSQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYG 55
Query: 111 YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170
A D G RVAVKK+ + FQ + I + RE+++L+ + HEN
Sbjct: 56 SVCAAFDTKTGHRVAVKKLSR--------PFQSI-----IHAKRTYRELRLLKHMK-HEN 101
Query: 171 VVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 224
V+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGL 157
Query: 225 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 284
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE+
Sbjct: 158 KYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEI 212
Query: 285 LKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP----------- 329
+ D+WS+G I LL GR F K +LR P
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 272
Query: 330 -------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375
+ P + +N A D ++K+LV D R+TAAQAL+H + + D
Sbjct: 273 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332
Query: 376 ASEIPI 381
+ P+
Sbjct: 333 PDDEPV 338
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 58/324 (17%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 25 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 73
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 74 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 123
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 124 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGS 181
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 182 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 241
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 242 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 301
Query: 354 DPRARLTAAQALSHPWVREGGDAS 377
P ARLT +A +H + E D +
Sbjct: 302 TPTARLTPLEACAHSFFDELRDPN 325
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 147/366 (40%), Gaps = 81/366 (22%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFG 110
H QER Y+Q K + R Q + P G G +G
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYG 56
Query: 111 YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170
A D G RVAVKK+ + FQ + I + RE+++L+ + HEN
Sbjct: 57 SVCAAFDTKTGHRVAVKKLSR--------PFQSI-----IHAKRTYRELRLLKHMK-HEN 102
Query: 171 VVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 224
V+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGL 158
Query: 225 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 284
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE+
Sbjct: 159 KYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMXGXVATRWYRAPEI 213
Query: 285 LKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP----------- 329
+ D+WS+G I LL GR F K +LR P
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 330 -------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375
+ P + +N A D ++K+LV D R+TAAQAL+H + + D
Sbjct: 274 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
Query: 376 ASEIPI 381
+ P+
Sbjct: 334 PDDEPV 339
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 127/308 (41%), Gaps = 70/308 (22%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A + G+ A+KKI K + S RE+ IL+
Sbjct: 10 IGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPS-------------TTIREISILK 55
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAME-----------LCEGGELLDRILAKKDSRYTEKD 212
L H N+VK Y+ + + E +CEGG L+ + AK
Sbjct: 56 ELK-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKS-------- 104
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQ 271
+ Q+L A CH ++HRD+KP+N L E LK DFGL+ F P +K+
Sbjct: 105 ---FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYT 158
Query: 272 DIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
+ + +Y AP+VL +K D+WS+G I ++ G F +E + R
Sbjct: 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILG 218
Query: 330 DFRRKPWPSISN-------------------------SAKDFVKKLLVKDPRARLTAAQA 364
K WP+++ S D + K+L DP R+TA QA
Sbjct: 219 TPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
Query: 365 LSHPWVRE 372
L H + +E
Sbjct: 279 LEHAYFKE 286
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 127/308 (41%), Gaps = 70/308 (22%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A + G+ A+KKI K + S RE+ IL+
Sbjct: 10 IGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPS-------------TTIREISILK 55
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAME-----------LCEGGELLDRILAKKDSRYTEKD 212
L H N+VK Y+ + + E +CEGG L+ + AK
Sbjct: 56 ELK-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKS-------- 104
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQ 271
+ Q+L A CH ++HRD+KP+N L E LK DFGL+ F P +K+
Sbjct: 105 ---FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYT 158
Query: 272 DIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
V + +Y AP+VL +K D+WS+G I ++ G F +E + R
Sbjct: 159 HEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILG 218
Query: 330 DFRRKPWPSISN-------------------------SAKDFVKKLLVKDPRARLTAAQA 364
K WP+++ S D + K+L DP R+TA QA
Sbjct: 219 TPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
Query: 365 LSHPWVRE 372
L H + +E
Sbjct: 279 LEHAYFKE 286
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 58/324 (17%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K F++
Sbjct: 32 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKN----- 80
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L E + R+ A+
Sbjct: 81 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARH 130
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 131 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGS 188
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 189 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 248
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 249 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 308
Query: 354 DPRARLTAAQALSHPWVREGGDAS 377
P ARLT +A +H + E D +
Sbjct: 309 TPTARLTPLEACAHSFFDELRDPN 332
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 136/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DF L+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFYLAR--HTDDEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 52/298 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K+LG+G G T V G VAVK++ ++ F D+ ++ E+K+
Sbjct: 21 KILGYGSSG-TVVFQGSFQGRPVAVKRM--------LIDFCDIALM----------EIKL 61
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT-----EKDAAVV 216
L H NV+++Y + D ++YIA+ELC L D + +K S E + +
Sbjct: 62 LTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISL 120
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLF----------KSAKEDSSLKATDFGLSDFIKP 266
+RQ+ A H ++HRD+KP+N L ++ E+ + +DFGL +
Sbjct: 121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 267 GK-----KFQDIVGSAYYVAPEVL--------KRKSGPESDVWSIG-VITYILLCGRRPF 312
G+ + G++ + APE+L KR+ D++S+G V YIL G+ PF
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 313 WDKT--EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
DK E I + + + + + S+ A D + +++ DP R TA + L HP
Sbjct: 241 GDKYSRESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 139/329 (42%), Gaps = 69/329 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D G VAVKK+ + FQ+ +
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L+ + H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 71 YRELVLLKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIHMELD---- 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFM 181
Query: 270 FQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV L D+WS+G I L+ G F W+K + +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQL 241
Query: 321 ----------FKEVLRNKPDFRRKPWPSI---------------------SNSAKDFVKK 349
+ +RN + R K +P I ++ A+D + K
Sbjct: 242 GTPSAEFMAALQPTVRNYVENRPK-YPGIKFEELFPDWIFPSESERDKIKTSQARDLLSK 300
Query: 350 LLVKDPRARLTAAQALSHPWVREGGDASE 378
+LV DP R++ +AL HP++ D +E
Sbjct: 301 MLVIDPDKRISVDEALRHPYITVWYDPAE 329
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 52/298 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K+LG+G G T V G VAVK++ ++ F D+ ++ E+K+
Sbjct: 21 KILGYGSSG-TVVFQGSFQGRPVAVKRM--------LIDFCDIALM----------EIKL 61
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT-----EKDAAVV 216
L H NV+++Y + D ++YIA+ELC L D + +K S E + +
Sbjct: 62 LTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISL 120
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLF----------KSAKEDSSLKATDFGLSDFIKP 266
+RQ+ A H ++HRD+KP+N L ++ E+ + +DFGL +
Sbjct: 121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 267 GK-----KFQDIVGSAYYVAPEVL--------KRKSGPESDVWSIG-VITYILLCGRRPF 312
G+ + G++ + APE+L KR+ D++S+G V YIL G+ PF
Sbjct: 181 GQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 313 WDKT--EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
DK E I + + + + + S+ A D + +++ DP R TA + L HP
Sbjct: 241 GDKYSRESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 141/332 (42%), Gaps = 75/332 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L + H+N++ N F E+ VYI MEL + L +++ +
Sbjct: 71 YREL-VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQME---LD 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D++LK DFGL+
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV+ E+ D+WS+GVI ++ G F W+K +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK----V 237
Query: 321 FKEVLRNKPDFRRKPWPSI----------------------------------SNSAKDF 346
+++ P+F +K P++ ++ A+D
Sbjct: 238 IEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
+ K+LV D R++ +AL HP++ D SE
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 26/280 (9%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL 144
R D GY+ + R I K +G GQF Y A +G VA+KK++ + D
Sbjct: 23 RPDMGYNTLANFR--IEKKIGRGQFSEVYRAACLLDGVPVALKKVQ-------IFDLMDA 73
Query: 145 KMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LA 202
K A D +E+ +L+ L H NV+K+Y +F +DN + I +EL + G+L I
Sbjct: 74 K-----ARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFK 127
Query: 203 KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 262
K+ E+ Q+ H ++HRD+KP N + +K D GL
Sbjct: 128 KQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGR 184
Query: 263 FIKP-GKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTED-- 318
F +VG+ YY++PE + + +SD+WS+G + Y + + PF+ +
Sbjct: 185 FFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 244
Query: 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 358
+ K++ + D+ P S + V + DP R
Sbjct: 245 SLCKKI--EQCDYPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 137/333 (41%), Gaps = 75/333 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 71 YREL-VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD---- 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I IL GR W+K +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----V 237
Query: 321 FKEVLRNKPDFRRKPWPSISN----------------------------------SAKDF 346
+++ P+F +K P++ N A+D
Sbjct: 238 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 297
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ K+LV DP R++ AL HP++ D +E+
Sbjct: 298 LSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 330
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---------PFEHQTY-----C 69
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 70 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KCQH 124
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+ P
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPD 181
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 242 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 301
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 302 PHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 136/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 59
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L D + A + + Q+L+
Sbjct: 60 EL-NHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 136/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK FGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILGFGLARHTD--DEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 136/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 60
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L D + A + + Q+L+
Sbjct: 61 EL-NHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 137/333 (41%), Gaps = 75/333 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQN-----QTHAKRA 71
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 72 YREL-VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD---- 125
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 182
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I IL GR W+K +
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----V 238
Query: 321 FKEVLRNKPDFRRKPWPSISN----------------------------------SAKDF 346
+++ P+F +K P++ N A+D
Sbjct: 239 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 298
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ K+LV DP R++ AL HP++ D +E+
Sbjct: 299 LSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 331
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 137/333 (41%), Gaps = 75/333 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 71 YREL-VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD---- 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I IL GR W+K +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----V 237
Query: 321 FKEVLRNKPDFRRKPWPSISN----------------------------------SAKDF 346
+++ P+F +K P++ N A+D
Sbjct: 238 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 297
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ K+LV DP R++ AL HP++ D +E+
Sbjct: 298 LSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 330
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 137/329 (41%), Gaps = 67/329 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQN-----QTHAKRA 63
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 64 YREL-VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LXQVIQMELD---- 117
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 118 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFM 174
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234
Query: 321 --------------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKL 350
+ + N+P + +P + ++ A+D + K+
Sbjct: 235 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 294
Query: 351 LVKDPRARLTAAQALSHPWVREGGDASEI 379
LV DP R++ AL HP++ D +E+
Sbjct: 295 LVIDPAKRISVDDALQHPYINVWYDPAEV 323
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 140/319 (43%), Gaps = 58/319 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G + D +G ++AVKK+ + FQ + I +
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSR--------PFQSI-----IHAKRTY 98
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 99 RELRLLKHMK-HENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 153
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 154 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEM 208
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F ++++R
Sbjct: 209 TGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLT 268
Query: 327 ---------------------NKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTA 361
+ P ++ + + + A D ++K+LV D R+TA
Sbjct: 269 GTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITA 328
Query: 362 AQALSHPWVREGGDASEIP 380
++AL+HP+ + D + P
Sbjct: 329 SEALAHPYFSQYHDPDDEP 347
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 137/333 (41%), Gaps = 75/333 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQN-----QTHAKRA 69
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 70 YREL-VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD---- 123
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 124 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 180
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I IL GR W+K +
Sbjct: 181 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----V 236
Query: 321 FKEVLRNKPDFRRKPWPSISN----------------------------------SAKDF 346
+++ P+F +K P++ N A+D
Sbjct: 237 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 296
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ K+LV DP R++ AL HP++ D +E+
Sbjct: 297 LSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 329
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 137/333 (41%), Gaps = 75/333 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQN-----QTHAKRA 71
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 72 YREL-VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD---- 125
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 182
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I IL GR W+K +
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----V 238
Query: 321 FKEVLRNKPDFRRKPWPSISN----------------------------------SAKDF 346
+++ P+F +K P++ N A+D
Sbjct: 239 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 298
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ K+LV DP R++ AL HP++ D +E+
Sbjct: 299 LSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 331
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 137/329 (41%), Gaps = 67/329 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 71 YREL-VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LXQVIQMELD---- 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 321 --------------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKL 350
+ + N+P + +P + ++ A+D + K+
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 301
Query: 351 LVKDPRARLTAAQALSHPWVREGGDASEI 379
LV DP R++ AL HP++ D +E+
Sbjct: 302 LVIDPAKRISVDDALQHPYINVWYDPAEV 330
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 147/366 (40%), Gaps = 81/366 (22%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFG 110
H QER Y+Q K + R Q + P G G +G
Sbjct: 19 HMSQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYG 55
Query: 111 YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170
A D G RVAVKK+ + FQ + I + RE+++L+ + HEN
Sbjct: 56 SVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTYRELRLLKHMK-HEN 101
Query: 171 VVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 224
V+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGL 157
Query: 225 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 284
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE+
Sbjct: 158 KYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEI 212
Query: 285 LKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP----------- 329
+ D+WS+G I LL GR F K +LR P
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 272
Query: 330 -------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375
+ P + +N A D ++K+LV D R+TAAQAL+H + + D
Sbjct: 273 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332
Query: 376 ASEIPI 381
+ P+
Sbjct: 333 PDDEPV 338
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 137/329 (41%), Gaps = 67/329 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQN-----QTHAKRA 64
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 65 YREL-VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD---- 118
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 175
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 176 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 235
Query: 321 --------------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKL 350
+ + N+P + +P + ++ A+D + K+
Sbjct: 236 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 295
Query: 351 LVKDPRARLTAAQALSHPWVREGGDASEI 379
LV DP R++ AL HP++ D +E+
Sbjct: 296 LVIDPAKRISVDDALQHPYINVWYDPAEV 324
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 137/333 (41%), Gaps = 75/333 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQN-----QTHAKRA 108
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 109 YREL-VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD---- 162
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 219
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I IL GR W+K +
Sbjct: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----V 275
Query: 321 FKEVLRNKPDFRRKPWPSISN----------------------------------SAKDF 346
+++ P+F +K P++ N A+D
Sbjct: 276 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 335
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ K+LV DP R++ AL HP++ D +E+
Sbjct: 336 LSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 368
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA++KI F+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKIS---------PFEHQTY-----C 69
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VYI +L E L ++L K
Sbjct: 70 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQH 124
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+ P
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPD 181
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 242 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 301
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 302 PHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 147/366 (40%), Gaps = 81/366 (22%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFG 110
H QER Y+Q K + R Q + P G G +G
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYG 56
Query: 111 YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170
A D G RVAVKK+ + FQ + I + RE+++L+ + HEN
Sbjct: 57 SVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTYRELRLLKHMK-HEN 102
Query: 171 VVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 224
V+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGL 158
Query: 225 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 284
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE+
Sbjct: 159 KYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEI 213
Query: 285 LKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP----------- 329
+ D+WS+G I LL GR F K +LR P
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 330 -------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375
+ P + +N A D ++K+LV D R+TAAQAL+H + + D
Sbjct: 274 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
Query: 376 ASEIPI 381
+ P+
Sbjct: 334 PDDEPV 339
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 137/329 (41%), Gaps = 67/329 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 71 YREL-VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LXQVIQMELD---- 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 321 --------------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKL 350
+ + N+P + +P + ++ A+D + K+
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 301
Query: 351 LVKDPRARLTAAQALSHPWVREGGDASEI 379
LV DP R++ AL HP++ D +E+
Sbjct: 302 LVIDPAKRISVDDALQHPYINVWYDPAEV 330
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 137/329 (41%), Gaps = 67/329 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQN-----QTHAKRA 64
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 65 YREL-VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD---- 118
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 175
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 176 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 235
Query: 321 --------------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKL 350
+ + N+P + +P + ++ A+D + K+
Sbjct: 236 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 295
Query: 351 LVKDPRARLTAAQALSHPWVREGGDASEI 379
LV DP R++ AL HP++ D +E+
Sbjct: 296 LVIDPAKRISVDDALQHPYINVWYDPAEV 324
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 137/333 (41%), Gaps = 75/333 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQN-----QTHAKRA 108
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 109 YREL-VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD---- 162
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 219
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I IL GR W+K +
Sbjct: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----V 275
Query: 321 FKEVLRNKPDFRRKPWPSISN----------------------------------SAKDF 346
+++ P+F +K P++ N A+D
Sbjct: 276 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 335
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ K+LV DP R++ AL HP++ D +E+
Sbjct: 336 LSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 368
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 141/332 (42%), Gaps = 75/332 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L + H+N++ N F E+ VYI MEL + L +++ +
Sbjct: 71 YREL-VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQME---LD 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D++LK DFGL+
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV+ E+ D+WS+GVI ++ G F W+K +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK----V 237
Query: 321 FKEVLRNKPDFRRKPWPSI----------------------------------SNSAKDF 346
+++ P+F +K P++ ++ A+D
Sbjct: 238 IEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
+ K+LV D R++ +AL HP++ D SE
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 137/333 (41%), Gaps = 75/333 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQN-----QTHAKRA 63
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 64 YREL-VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD---- 117
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 118 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 174
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I IL GR W+K +
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----V 230
Query: 321 FKEVLRNKPDFRRKPWPSISN----------------------------------SAKDF 346
+++ P+F +K P++ N A+D
Sbjct: 231 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 290
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ K+LV DP R++ AL HP++ D +E+
Sbjct: 291 LSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 323
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 130/327 (39%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI F+
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---------PFEHQTY-----C 85
Query: 153 EDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + E VY+ L G +L + K
Sbjct: 86 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYLVTHLM-GADLYKLL---KTQH 140
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L + + LK DFGL+ P
Sbjct: 141 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPD 197
Query: 268 KK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE---- 317
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 198 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 257
Query: 318 ---DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
GI + L + P + PW P+ + A D + K+L +
Sbjct: 258 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 317
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 318 PHKRIEVEQALAHPYLEQYYDPSDEPI 344
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 134/325 (41%), Gaps = 70/325 (21%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RY K LG G G + A D RVA+KKI P +V
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD---------------PQSV 52
Query: 153 EDVKREVKILQALAGHENVVKFY-------NAFEDD-------NYVYIAMELCEGGELLD 198
+ RE+KI++ L H+N+VK + + DD N VYI E E D
Sbjct: 53 KHALREIKIIRRL-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET----D 107
Query: 199 RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ E+ A + + Q+LR H ++HRD+KP N + ED LK DF
Sbjct: 108 LANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--EDLVLKIGDF 165
Query: 259 GLSDFIKP-----GKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRP 311
GL+ + P G + +V + +Y +P +L + D+W+ G I +L G+
Sbjct: 166 GLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTL 224
Query: 312 FWDKTEDGIFKEVLRNKPDFR----------------------RKP----WPSISNSAKD 345
F E + +L + P KP P IS A D
Sbjct: 225 FAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVD 284
Query: 346 FVKKLLVKDPRARLTAAQALSHPWV 370
F++++L P RLTA +ALSHP++
Sbjct: 285 FLEQILTFSPMDRLTAEEALSHPYM 309
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 139/300 (46%), Gaps = 52/300 (17%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + + + + A+ RE+ +L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLD---------TETEGVPSTAI----REISLLK 58
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV---VRQM 220
L H N+VK + +N +Y+ E +D S T ++ + Q+
Sbjct: 59 EL-NHPNIVKLLDVIHTENKLYLVFEFLS----MDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 279
L+ A CH H ++HRD+KPEN L + + ++K DFGL+ F P + + V + +Y
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 280 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 324
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 325 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 52/300 (17%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 60
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV---VRQM 220
L H N+VK + +N +Y+ E +D S T ++ + Q+
Sbjct: 61 EL-NHPNIVKLLDVIHTENKLYLVFEFLS----MDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 279
L+ A CH H ++HRD+KPEN L + + ++K DFGL+ F P + + V + +Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 280 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 324
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 325 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 136/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK D GL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDAGLARHTD--DEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 137/332 (41%), Gaps = 75/332 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VYI MEL + L I + D
Sbjct: 71 YREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD---- 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
+ V + YY APEV+ E+ D+WS+G I ++C + F W+K +
Sbjct: 182 MEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNK----V 237
Query: 321 FKEVLRNKPDFRRKPWPSISN----------------------------------SAKDF 346
+++ P F +K P++ N A+D
Sbjct: 238 IEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
+ K+LV D R++ +AL HP++ D SE
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 133/317 (41%), Gaps = 50/317 (15%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
Y + ++ +G L+G G +G +K G VA+KK ++ D KM+
Sbjct: 20 YFQSMEKYENLG-LVGEGSYGMVMKCRNKDTGRIVAIKKFLES---------DDDKMVKK 69
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
IA+ RE+K+L+ L HEN+V + Y+ E + L D L Y
Sbjct: 70 IAM----REIKLLKQLR-HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQ 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGK 268
+ Q++ CH H ++HRD+KPEN L + +K DFG + PG+
Sbjct: 125 VVQKYLF--QIINGIGFCHSHNIIHRDIKPENIL---VSQSGVVKLCDFGFARTLAAPGE 179
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF-WDKTEDGIF---- 321
+ D V + +Y APE+L K G DVW+IG + + G F D D ++
Sbjct: 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMM 239
Query: 322 ---------KEVLRNKPDF---------RRKP----WPSISNSAKDFVKKLLVKDPRARL 359
+E+ P F R+P +P +S D KK L DP R
Sbjct: 240 CLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP 299
Query: 360 TAAQALSHPWVREGGDA 376
A+ L H + + G A
Sbjct: 300 FCAELLHHDFFQMDGFA 316
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 30/296 (10%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL--KMILPIA 151
F+ Y +G LLG G FG + + +VA+K I +N RV+ + L + P+
Sbjct: 29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRN----RVLGWSPLSDSVTCPLE 84
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME-LCEGGELLDRILAKKDSRYTE 210
V + + + A GH V++ + FE + +E +L D I K E
Sbjct: 85 VALLWK----VGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEK--GPLGE 138
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+ Q++ CH G+VHRD+K EN L + K DFG + + +
Sbjct: 139 GPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRR--GCAKLIDFGSGALLH-DEPY 195
Query: 271 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
D G+ Y PE + R + VWS+G++ Y ++CG PF D +E+L +
Sbjct: 196 TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF---ERD---QEILEAE 249
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 384
F +S +++ L P +R + + L PW++ A ++P++ S
Sbjct: 250 LHFPAH----VSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT--PAEDVPLNPS 299
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
+LG G FG +A K + A+K ++K+ ++ QD VE E ++L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVI------QDDD------VECTMVEKRVL 73
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
L + + ++ F+ + +Y ME GG+L+ I ++ ++ E A ++
Sbjct: 74 ALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISI 131
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVA 281
H G+++RD+K +N + S + +K DFG+ + + G ++ G+ Y+A
Sbjct: 132 GLFFLHKRGIIYRDLKLDNVMLDS---EGHIKIADFGMCKEHMMDGVTTREFCGTPDYIA 188
Query: 282 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 340
PE++ + G D W+ GV+ Y +L G+ PF + ED +F+ ++ + + + S+S
Sbjct: 189 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLS 244
Query: 341 NSAKDFVKKLLVKDPRARLTAA 362
A K L+ K P RL
Sbjct: 245 KEAVSICKGLMTKHPAKRLGCG 266
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 136/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK D GL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDGGLARHTD--DEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 138/297 (46%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + + + + A+ RE+ +L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLD---------TETEGVPSTAI----REISLLK 58
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 59 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KPEN L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 117 LAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 59
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 60 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KPEN L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 118 LAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 142/324 (43%), Gaps = 58/324 (17%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ + K +F++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK------AFKN----- 61
Query: 149 PIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
RE++I++ L H N+V+ FY++ E + VY+ + L + R+ A+
Sbjct: 62 --------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRV-ARH 111
Query: 205 DSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 112 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGS 169
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 318
+ + G+ + S YY APE++ + S DVWS G + LL G+ F +
Sbjct: 170 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
Query: 319 GIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVK 353
E+++ P + PW P A +LL
Sbjct: 230 DQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 289
Query: 354 DPRARLTAAQALSHPWVREGGDAS 377
P ARLT +A +H + E D +
Sbjct: 290 TPTARLTPLEACAHSFFDELRDPN 313
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 136/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 69
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK D GL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDRGLARHTD--DEM 179
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 327 NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTA 361
P + P + +N A D ++K+LV D R+TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 300 AQALAHAYFAQYHDPDDEPV 319
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 116/239 (48%), Gaps = 36/239 (15%)
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYT 209
V+ E + + + H +V ++ F+ ++ ++ +E GG+L+ R L ++ +R+
Sbjct: 99 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 158
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGK 268
+ ++ + + H G+++RD+K +N L S + +K TD+G+ + ++PG
Sbjct: 159 SAEISLALNYL-------HERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGD 208
Query: 269 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF---------WDKTED 318
G+ Y+APE+L+ + G D W++GV+ + ++ GR PF TED
Sbjct: 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 268
Query: 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 371
+F+ +L + R S+S A +K L KDP+ RL A HP+ R
Sbjct: 269 YLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 138/332 (41%), Gaps = 75/332 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 29 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--------PFQN-----QTHAKRA 75
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VYI MEL + L I + D
Sbjct: 76 YREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD---- 129
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 130 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 186
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I ++C + F W+K +
Sbjct: 187 MTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK----V 242
Query: 321 FKEVLRNKPDFRRKPWPSI----------------------------------SNSAKDF 346
+++ P+F +K P++ ++ A+D
Sbjct: 243 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 302
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
+ K+LV D R++ +AL HP++ D SE
Sbjct: 303 LSKMLVIDASKRISVDEALQHPYINVWYDPSE 334
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 139/332 (41%), Gaps = 75/332 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VYI MEL + L I + D
Sbjct: 71 YREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD---- 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
+ V + YY APEV+ E+ D+WS+G I ++C + F W+K +
Sbjct: 182 MEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK----V 237
Query: 321 FKEVLRNKPDFRRKPWPSI----------------------------------SNSAKDF 346
+++ P+F +K P++ ++ A+D
Sbjct: 238 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
+ K+LV D R++ +AL HP++ D SE
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 126/270 (46%), Gaps = 26/270 (9%)
Query: 119 ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN-VVKFYNA 177
+G V ++ K I + + +L+ ++ + E+ L L H + +++ Y+
Sbjct: 65 GSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 124
Query: 178 FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 237
D Y+Y+ ME C +L + KK E+ + + ML H HG+VH D+
Sbjct: 125 EITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHGIVHSDL 181
Query: 238 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-----RKS 289
KP NFL D LK DFG+++ ++P VG+ Y+ PE +K R++
Sbjct: 182 KPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 237
Query: 290 GPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-SN 341
G DVWS+G I Y + G+ PF + + I K P+ + +P I
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE-FPDIPEK 295
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+D +K L +DP+ R++ + L+HP+V+
Sbjct: 296 DLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 138/332 (41%), Gaps = 75/332 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--------PFQN-----QTHAKRA 64
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VYI MEL + L I + D
Sbjct: 65 YREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD---- 118
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 175
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I ++C + F W+K +
Sbjct: 176 MTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK----V 231
Query: 321 FKEVLRNKPDFRRKPWPSI----------------------------------SNSAKDF 346
+++ P+F +K P++ ++ A+D
Sbjct: 232 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 291
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
+ K+LV D R++ +AL HP++ D SE
Sbjct: 292 LSKMLVIDASKRISVDEALQHPYINVWYDPSE 323
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 130/294 (44%), Gaps = 28/294 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G++LG G ++A D + VAVK + + L R SF L+ +
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--LARDPSFY-LRF---------R 60
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKKDSRYTEKD 212
RE + AL H +V Y+ E + YI ME +G L D + + T K
Sbjct: 61 REAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKR 117
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG----K 268
A V+ + H +G++HRD+KP N + + +++K DFG++ I
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVT 174
Query: 269 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327
+ ++G+A Y++PE + S SDV+S+G + Y +L G PF + D + + +R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE 234
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGDASEIP 380
P +S V K L K+P R A + VR G+ E P
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 126/270 (46%), Gaps = 26/270 (9%)
Query: 119 ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN-VVKFYNA 177
+G V ++ K I + + +L+ ++ + E+ L L H + +++ Y+
Sbjct: 65 GSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 124
Query: 178 FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 237
D Y+Y+ ME C +L + KK E+ + + ML H HG+VH D+
Sbjct: 125 EITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHGIVHSDL 181
Query: 238 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-----RKS 289
KP NFL D LK DFG+++ ++P VG+ Y+ PE +K R++
Sbjct: 182 KPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 237
Query: 290 GPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-SN 341
G DVWS+G I Y + G+ PF + + I K P+ + +P I
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE-FPDIPEK 295
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+D +K L +DP+ R++ + L+HP+V+
Sbjct: 296 DLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 130/298 (43%), Gaps = 45/298 (15%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY LG GQF Y A DK VA+KKI K+ R + +
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGIN-------RTA 59
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
RE+K+LQ L+ H N++ +AF + + + + E L+ I+ T
Sbjct: 60 LREIKLLQELS-HPNIIGLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKA 116
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 274
+ L+ H H ++HRD+KP N L E+ LK DFGL+ F P + + V
Sbjct: 117 YMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQV 173
Query: 275 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-----GIFKEV--- 324
+ +Y APE+L R G D+W++G I LL R PF D IF+ +
Sbjct: 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFETLGTP 232
Query: 325 -------LRNKPDFRR-KPWPSI---------SNSAKDFVKKLLVKDPRARLTAAQAL 365
+ + PD+ K +P I + D ++ L + +P AR+TA QAL
Sbjct: 233 TEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL 290
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 57
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 58 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 283 EVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 126/270 (46%), Gaps = 26/270 (9%)
Query: 119 ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN-VVKFYNA 177
+G V ++ K I + + +L+ ++ + E+ L L H + +++ Y+
Sbjct: 65 GSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 124
Query: 178 FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 237
D Y+Y+ ME C +L + KK E+ + + ML H HG+VH D+
Sbjct: 125 EITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHGIVHSDL 181
Query: 238 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-----RKS 289
KP NFL D LK DFG+++ ++P VG+ Y+ PE +K R++
Sbjct: 182 KPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSREN 237
Query: 290 GPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-SN 341
G DVWS+G I Y + G+ PF + + I K P+ + +P I
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE-FPDIPEK 295
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+D +K L +DP+ R++ + L+HP+V+
Sbjct: 296 DLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 58/312 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G A D G +VA+KK+ + FQ + + RE+++L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYR--------PFQS-----ELFAKRAYRELRLLK 79
Query: 164 ALAGHENVVKFYNAFEDDNYV------YIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
+ HENV+ + F D + Y+ M G L +++ K + E +V
Sbjct: 80 HMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLM--KHEKLGEDRIQFLV 134
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
QML+ H G++HRD+KP N + ED LK DFGL+ + + V +
Sbjct: 135 YQMLKGLRYIHAAGIIHRDLKPGNL---AVNEDCELKILDFGLAR--QADSEMXGXVVTR 189
Query: 278 YYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------- 326
+Y APEV+ + D+WS+G I ++ G+ F KE+++
Sbjct: 190 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 249
Query: 327 --------------NKPDFRRKPWPSISNSAK----DFVKKLLVKDPRARLTAAQALSHP 368
P+ +K + SI +A + ++K+LV D R+TA +AL+HP
Sbjct: 250 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 309
Query: 369 WVREGGDASEIP 380
+ D + P
Sbjct: 310 YFESLHDTEDEP 321
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 116/239 (48%), Gaps = 36/239 (15%)
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYT 209
V+ E + + + H +V ++ F+ ++ ++ +E GG+L+ R L ++ +R+
Sbjct: 67 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 126
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGK 268
+ ++ + + H G+++RD+K +N L S + +K TD+G+ + ++PG
Sbjct: 127 SAEISLALNYL-------HERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGD 176
Query: 269 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF---------WDKTED 318
G+ Y+APE+L+ + G D W++GV+ + ++ GR PF TED
Sbjct: 177 TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 236
Query: 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 371
+F+ +L + R S+S A +K L KDP+ RL A HP+ R
Sbjct: 237 YLFQVILEKQIRIPR----SMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFR 291
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 26/238 (10%)
Query: 151 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L + KK
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 127
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E+ + + ML H HG+VH D+KP NFL D LK DFG+++ ++P
Sbjct: 128 ERKS--YWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXX 181
Query: 270 F---QDIVGSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWD 314
VG+ Y+ PE +K R++G DVWS+G I Y + G+ PF
Sbjct: 182 XVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-Q 240
Query: 315 KTEDGIFKEVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ + I K P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 241 QIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 64
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 65 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
Query: 283 EVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 239
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 240 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 116/239 (48%), Gaps = 36/239 (15%)
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYT 209
V+ E + + + H +V ++ F+ ++ ++ +E GG+L+ R L ++ +R+
Sbjct: 52 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 111
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGK 268
+ ++ + + H G+++RD+K +N L S + +K TD+G+ + ++PG
Sbjct: 112 SAEISLALNYL-------HERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGD 161
Query: 269 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF---------WDKTED 318
G+ Y+APE+L+ + G D W++GV+ + ++ GR PF TED
Sbjct: 162 TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 221
Query: 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 371
+F+ +L + R S+S A +K L KDP+ RL A HP+ R
Sbjct: 222 YLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 276
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 126/270 (46%), Gaps = 26/270 (9%)
Query: 119 ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN-VVKFYNA 177
+G V ++ K I + + +L+ ++ + E+ L L H + +++ Y+
Sbjct: 18 GSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 77
Query: 178 FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 237
D Y+Y+ ME C +L + KK E+ + + ML H HG+VH D+
Sbjct: 78 EITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHGIVHSDL 134
Query: 238 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-----RKS 289
KP NFL D LK DFG+++ ++P VG+ Y+ PE +K R++
Sbjct: 135 KPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 190
Query: 290 GPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 342
G DVWS+G I Y + G+ PF + + I K P+ + +P I
Sbjct: 191 GKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE-FPDIPEK 248
Query: 343 -AKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+D +K L +DP+ R++ + L+HP+V+
Sbjct: 249 DLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 116/239 (48%), Gaps = 36/239 (15%)
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYT 209
V+ E + + + H +V ++ F+ ++ ++ +E GG+L+ R L ++ +R+
Sbjct: 56 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 115
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGK 268
+ ++ + + H G+++RD+K +N L S + +K TD+G+ + ++PG
Sbjct: 116 SAEISLALNYL-------HERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGD 165
Query: 269 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF---------WDKTED 318
G+ Y+APE+L+ + G D W++GV+ + ++ GR PF TED
Sbjct: 166 TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 225
Query: 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 371
+F+ +L + R S+S A +K L KDP+ RL A HP+ R
Sbjct: 226 YLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 146/364 (40%), Gaps = 81/364 (22%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 45
Query: 113 YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172
A D G RVAVKK+ + FQ + I + RE+++L+ + HENV+
Sbjct: 46 CAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTYRELRLLKHMK-HENVI 91
Query: 173 KFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 226
+ F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKY 147
Query: 227 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 286
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE++
Sbjct: 148 IHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIML 202
Query: 287 R--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------- 329
D+WS+G I LL GR F K +LR P
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 262
Query: 330 -----DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377
+ P + +N A D ++K+LV D R+TAAQAL+H + + D
Sbjct: 263 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
Query: 378 EIPI 381
+ P+
Sbjct: 323 DEPV 326
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 26/238 (10%)
Query: 151 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L + KK
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 127
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E+ + + ML H HG+VH D+KP NFL D LK DFG+++ ++P
Sbjct: 128 ERKS--YWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTT 181
Query: 270 F---QDIVGSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWD 314
VG+ Y+ PE +K R++G DVWS+G I Y + G+ PF
Sbjct: 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-Q 240
Query: 315 KTEDGIFKEVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ + I K P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 241 QIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 61
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 62 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 176
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 236
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 237 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 128/275 (46%), Gaps = 26/275 (9%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D +FD + I + +G G FG + A+K + K K + R
Sbjct: 11 DVNFDH-FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERN------------ 57
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
V +V +E++I+Q L H +V + +F+D+ +++ ++L GG+L R +++ + E
Sbjct: 58 EVRNVFKELQIMQGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDL--RYHLQQNVHFKE 114
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+ + + +++ ++HRDMKP+N L E + TDF ++ + +
Sbjct: 115 ETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD---EHGHVHITDFNIAAMLPRETQI 171
Query: 271 QDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326
+ G+ Y+APE+ + G D WS+GV Y LL GRRP+ ++ KE++
Sbjct: 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVH 230
Query: 327 NKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLT 360
+ +PS S +KKLL +P R +
Sbjct: 231 TF-ETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 146/364 (40%), Gaps = 81/364 (22%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 45
Query: 113 YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172
A D G RVAVKK+ + FQ + I + RE+++L+ + HENV+
Sbjct: 46 CAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTYRELRLLKHMK-HENVI 91
Query: 173 KFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 226
+ F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKY 147
Query: 227 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 286
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE++
Sbjct: 148 IHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIML 202
Query: 287 R--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------- 329
D+WS+G I LL GR F K +LR P
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 262
Query: 330 -----DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377
+ P + +N A D ++K+LV D R+TAAQAL+H + + D
Sbjct: 263 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
Query: 378 EIPI 381
+ P+
Sbjct: 323 DEPV 326
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 146/364 (40%), Gaps = 81/364 (22%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 45
Query: 113 YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172
A D G RVAVKK+ + FQ + I + RE+++L+ + HENV+
Sbjct: 46 CAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTYRELRLLKHMK-HENVI 91
Query: 173 KFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 226
+ F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKY 147
Query: 227 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 286
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE++
Sbjct: 148 IHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIML 202
Query: 287 R--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------- 329
D+WS+G I LL GR F K +LR P
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 262
Query: 330 -----DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377
+ P + +N A D ++K+LV D R+TAAQAL+H + + D
Sbjct: 263 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
Query: 378 EIPI 381
+ P+
Sbjct: 323 DEPV 326
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 60
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 61 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 140/332 (42%), Gaps = 75/332 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L + H+N++ N F E+ VYI MEL + L +++ +
Sbjct: 71 YREL-VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQME---LD 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D++LK DFGL+
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I ++ G F W+K +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----V 237
Query: 321 FKEVLRNKPDFRRKPWPSI----------------------------------SNSAKDF 346
+++ P+F +K P++ ++ A+D
Sbjct: 238 IEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
+ K+LV D R++ +AL HP++ D SE
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 57
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 58 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 57
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 58 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 56
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 57 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 26/238 (10%)
Query: 151 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L + KK
Sbjct: 53 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 111
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E+ + + ML H HG+VH D+KP NFL D LK DFG+++ ++P
Sbjct: 112 ERKS--YWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTT 165
Query: 270 F---QDIVGSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWD 314
VG+ Y+ PE +K R++G DVWS+G I Y + G+ PF
Sbjct: 166 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-Q 224
Query: 315 KTEDGIFKEVLRNKPDFRRKPWPSISNS-AKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ + I K P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 225 QIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 57
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 58 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 56
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 57 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 57
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 58 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 57
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 58 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 60
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 61 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 59
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 60 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 59
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 60 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 58
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 59 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 138/297 (46%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + + + + A+ RE+ +L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLD---------TETEGVPSTAI----REISLLK 58
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 59 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 173
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 58
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 59 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 56
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 57 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 64
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 65 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 239
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 240 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 56
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 57 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 57
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 58 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 140/332 (42%), Gaps = 75/332 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L + H+N++ N F E+ VYI MEL + L +++ +
Sbjct: 71 YREL-VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQME---LD 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D++LK DFGL+
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I ++ G F W+K +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----V 237
Query: 321 FKEVLRNKPDFRRKPWPSI----------------------------------SNSAKDF 346
+++ P+F +K P++ ++ A+D
Sbjct: 238 IEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
+ K+LV D R++ +AL HP++ D SE
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 60
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 61 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 61
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 62 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 176
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 236
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 237 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 26/238 (10%)
Query: 151 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L + KK
Sbjct: 49 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 107
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E+ + + ML H HG+VH D+KP NFL D LK DFG+++ ++P
Sbjct: 108 ERKS--YWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTT 161
Query: 270 F---QDIVGSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWD 314
VG+ Y+ PE +K R++G DVWS+G I Y + G+ PF
Sbjct: 162 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-Q 220
Query: 315 KTEDGIFKEVLRNKPDFRRKPWPSISNS-AKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ + I K P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 221 QIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 146/364 (40%), Gaps = 81/364 (22%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 45
Query: 113 YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172
A D G RVAVKK+ + FQ + I + RE+++L+ + HENV+
Sbjct: 46 CAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTYRELRLLKHMK-HENVI 91
Query: 173 KFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 226
+ F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKY 147
Query: 227 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 286
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE++
Sbjct: 148 IHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 202
Query: 287 R--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------- 329
D+WS+G I LL GR F K +LR P
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 262
Query: 330 -----DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377
+ P + +N A D ++K+LV D R+TAAQAL+H + + D
Sbjct: 263 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
Query: 378 EIPI 381
+ P+
Sbjct: 323 DEPV 326
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 147/364 (40%), Gaps = 81/364 (22%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P +G G +G
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQ-NLSP----------------------IGSGAYGSV 43
Query: 113 YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172
A D G RVAVKK+ + FQ + I + RE+++L+ + HENV+
Sbjct: 44 CAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTYRELRLLKHMK-HENVI 89
Query: 173 KFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 226
+ F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKY 145
Query: 227 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 286
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE++
Sbjct: 146 IHSADIIHRDLKPSNL---AVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 200
Query: 287 R--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------- 329
D+WS+G I LL GR F K +LR P
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 260
Query: 330 -----DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377
+ P + +N A D ++K+LV D R+TAAQAL+H + + D
Sbjct: 261 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
Query: 378 EIPI 381
+ P+
Sbjct: 321 DEPV 324
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 146/364 (40%), Gaps = 81/364 (22%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 43
Query: 113 YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172
A D G RVAVKK+ + FQ + I + RE+++L+ + HENV+
Sbjct: 44 CAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTYRELRLLKHMK-HENVI 89
Query: 173 KFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 226
+ F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKY 145
Query: 227 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 286
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE++
Sbjct: 146 IHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 200
Query: 287 R--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------- 329
D+WS+G I LL GR F K +LR P
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 260
Query: 330 -----DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377
+ P + +N A D ++K+LV D R+TAAQAL+H + + D
Sbjct: 261 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
Query: 378 EIPI 381
+ P+
Sbjct: 321 DEPV 324
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 139/332 (41%), Gaps = 75/332 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VYI MEL + L +++ +
Sbjct: 71 YREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQME---LD 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D++LK DFGL+
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I ++ G F W+K +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----V 237
Query: 321 FKEVLRNKPDFRRKPWPSI----------------------------------SNSAKDF 346
+++ P+F +K P++ ++ A+D
Sbjct: 238 IEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
+ K+LV D R++ +AL HP++ D SE
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 123/283 (43%), Gaps = 32/283 (11%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-----EKNKILIRVVSFQDLKM 146
K + RY I LG G Y+A D +VA+K I EK + L R
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRF-------- 58
Query: 147 ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS 206
+REV L+ H+N+V + E+D+ Y+ ME EG L + I +
Sbjct: 59 ---------EREVHNSSQLS-HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI--ESHG 106
Query: 207 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
+ A Q+L H +VHRD+KP+N L S K +LK DFG++ +
Sbjct: 107 PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK---TLKIFDFGIAKALSE 163
Query: 267 GKKFQD--IVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGI-FK 322
Q ++G+ Y +PE K ++ E +D++SIG++ Y +L G PF +T I K
Sbjct: 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIK 223
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365
+ + P+ I S + + + KD R Q +
Sbjct: 224 HIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEM 266
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 137/332 (41%), Gaps = 75/332 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VYI MEL + L I + D
Sbjct: 71 YREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD---- 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I ++ G F W+K +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----V 237
Query: 321 FKEVLRNKPDFRRKPWPSI----------------------------------SNSAKDF 346
+++ P+F +K P++ ++ A+D
Sbjct: 238 IEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
+ K+LV D R++ +AL HP++ D SE
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 146/364 (40%), Gaps = 81/364 (22%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 43
Query: 113 YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172
A D G RVAVKK+ + FQ + I + RE+++L+ + HENV+
Sbjct: 44 CAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTYRELRLLKHMK-HENVI 89
Query: 173 KFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 226
+ F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKY 145
Query: 227 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 286
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE++
Sbjct: 146 IHSADIIHRDLKPSNL---AVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 200
Query: 287 R--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------- 329
D+WS+G I LL GR F K +LR P
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 260
Query: 330 -----DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377
+ P + +N A D ++K+LV D R+TAAQAL+H + + D
Sbjct: 261 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
Query: 378 EIPI 381
+ P+
Sbjct: 321 DEPV 324
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + V S RE+ +L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-------------TAIREISLLK 60
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E + +L + A + + Q+L+
Sbjct: 61 EL-NHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 138/297 (46%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + + + + A+ RE+ +L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLD---------TETEGVPSTAI----REISLLK 56
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 57 EL-NHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 134/289 (46%), Gaps = 38/289 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR--VVSFQDLKMILPIAVEDV 155
+ I K++G G F V K G A+K + K +L R V F++ + +L V
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVL---VNGD 119
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+R + + + AF+D+NY+Y+ ME GG+LL +L+K R + A
Sbjct: 120 RRWI------------TQLHFAFQDENYLYLVMEYYVGGDLL-TLLSKFGERIPAEMARF 166
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI-- 273
+ +++ H G VHRD+KP+N L ++ DFG ++ + +
Sbjct: 167 YLAEIVMAIDSVHRLGYVHRDIKPDNILLDRC---GHIRLADFGSCLKLRADGTVRSLVA 223
Query: 274 VGSAYYVAPEVLK--------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325
VG+ Y++PE+L+ GPE D W++GV Y + G+ PF+ + + +++
Sbjct: 224 VGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV 283
Query: 326 RNKPDFRRKPW--PSISNSAKDFVKKLLVKDPRARL---TAAQALSHPW 369
K + P + A+DF+++LL P RL A +HP+
Sbjct: 284 HYK-EHLSLPLVDEGVPEEARDFIQRLLCP-PETRLGRGGAGDFRTHPF 330
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 133/320 (41%), Gaps = 67/320 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 71 YREL-VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD---- 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 321 --------------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKL 350
+ + N+P + +P + ++ A+D + K+
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 301
Query: 351 LVKDPRARLTAAQALSHPWV 370
LV DP R++ AL HP++
Sbjct: 302 LVIDPAKRISVDDALQHPYI 321
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 32/297 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+Y +G LLG G +G D R AVK ++K K +P +VK
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKK-----------LRRIPNGEANVK 54
Query: 157 REVKILQALAGHENVVKFYNAF--EDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKD 212
+E+++L+ L H+NV++ + E+ +Y+ ME C G E+LD + K R+
Sbjct: 55 KEIQLLRRLR-HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK---RFPVCQ 110
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKK 269
A Q++ H G+VH+D+KP N L + +LK + G+++ + P
Sbjct: 111 AHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTG---GTLKISALGVAEALHPFAADDT 167
Query: 270 FQDIVGSAYYVAPEV---LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326
+ GS + PE+ L SG + D+WS GV Y + G PF +F+ + +
Sbjct: 168 CRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGK 227
Query: 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI 383
P +S D +K +L +P R + Q H W R+ +E P+ I
Sbjct: 228 GSYAIPGDCGPPLS----DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPI 280
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 135/327 (41%), Gaps = 67/327 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 71 YREL-VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LXQVIQMELD---- 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 321 --------------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKL 350
+ + N+P + +P + ++ A+D + K+
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 301
Query: 351 LVKDPRARLTAAQALSHPWVREGGDAS 377
LV DP R++ AL HP++ D +
Sbjct: 302 LVIDPAKRISVDDALQHPYINVWYDPA 328
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 138/332 (41%), Gaps = 75/332 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VYI MEL + L +++ +
Sbjct: 71 YREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQME---LD 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I ++ G F W+K +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----V 237
Query: 321 FKEVLRNKPDFRRKPWPSI----------------------------------SNSAKDF 346
+++ P+F +K P++ ++ A+D
Sbjct: 238 IEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
+ K+LV D R++ +AL HP++ D SE
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 138/297 (46%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI + + + + A+ RE+ +L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLD---------TETEGVPSTAI----REISLLK 57
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 58 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
+ CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 116 LSFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 146/360 (40%), Gaps = 105/360 (29%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y I L+G G +GY Y+A DK VA+KK+ + F+DL I + + R
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR--------MFEDL-----IDCKRILR 74
Query: 158 EVKILQALAGHENVVKFYNAFEDDNY-----VYIAMELCEGGELLDRILAKKDSRYTEKD 212
E+ IL L + +++ Y+ D+ +YI +E+ + + L K TE+
Sbjct: 75 EITILNRLKS-DYIIRLYDLIIPDDLLKFDELYIVLEIADSDL---KKLFKTPIFLTEEH 130
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------- 264
++ +L H G++HRD+KP N L +D S+K DFGL+ I
Sbjct: 131 IKTILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNI 187
Query: 265 --------KPG-------KKFQDIVGSAYYVAPE--VLKRKSGPESDVWSIGVITYILL- 306
+PG K+ V + +Y APE +L+ D+WS G I LL
Sbjct: 188 VNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
Query: 307 ---------CGRRPFW----------DKTEDGIFKEVLR--------------------- 326
R P + D+ + ++ R
Sbjct: 248 MLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNI 307
Query: 327 NKPDF--------RRKP------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
NKP+ RKP +PSIS+ + ++ +L +P R+T QAL HP++++
Sbjct: 308 NKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 137/332 (41%), Gaps = 75/332 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--------PFQN-----QTHAKRA 71
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VYI MEL + L I + D
Sbjct: 72 YREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD---- 125
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 182
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I ++ G F W+K +
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----V 238
Query: 321 FKEVLRNKPDFRRKPWPSI----------------------------------SNSAKDF 346
+++ P+F +K P++ ++ A+D
Sbjct: 239 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 298
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
+ K+LV D R++ +AL HP++ D SE
Sbjct: 299 LSKMLVIDASKRISVDEALQHPYINVWYDPSE 330
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 137/332 (41%), Gaps = 75/332 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VYI MEL + L I + D
Sbjct: 71 YREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD---- 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I ++ G F W+K +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----V 237
Query: 321 FKEVLRNKPDFRRKPWPSI----------------------------------SNSAKDF 346
+++ P+F +K P++ ++ A+D
Sbjct: 238 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
+ K+LV D R++ +AL HP++ D SE
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 137/332 (41%), Gaps = 75/332 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--------PFQN-----QTHAKRA 72
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VYI MEL + L I + D
Sbjct: 73 YREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD---- 126
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 127 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 183
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I ++ G F W+K +
Sbjct: 184 MVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----V 239
Query: 321 FKEVLRNKPDFRRKPWPSI----------------------------------SNSAKDF 346
+++ P+F +K P++ ++ A+D
Sbjct: 240 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 299
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
+ K+LV D R++ +AL HP++ D SE
Sbjct: 300 LSKMLVIDASKRISVDEALQHPYINVWYDPSE 331
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 128/284 (45%), Gaps = 34/284 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G G + + K +G +A K I I P + RE+++L
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPAIRNQIIRELQVLH 78
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE----KDAAVVVRQ 219
+V FY AF D + I ME +GG LD++L KK R E K + V++
Sbjct: 79 E-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPEQILGKVSIAVIKG 135
Query: 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 279
+ + + H ++HRD+KP N L S E +K DFG+S + VG+ Y
Sbjct: 136 LTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSY 188
Query: 280 VAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL---RNKPDFRRKP 335
++PE L+ +SD+WS+G+ + GR P + E+L N+P + P
Sbjct: 189 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPP-PKLP 247
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
S +DFV K L+K+P R Q + H +++ DA E+
Sbjct: 248 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 290
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 101/179 (56%), Gaps = 21/179 (11%)
Query: 384 SVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA 443
++L N++ F K + LK+ AL +A L D E+ +LR+ F A+DVD +G++S +E+ L
Sbjct: 25 TLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLK 84
Query: 444 KDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAA--- 500
K + ++ + ++L+ ID N G + +++F+AAT+ ++ +L+ +
Sbjct: 85 K-IGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATI---------DKQTYLKKEVCLIP 134
Query: 501 FEKFDIDRDGFITPEELRMHTG--------LKGSIDPLLEEADIDKDGRISLSEFRRLL 551
F+ FDID +G I+ EEL+ G + +ID LL+E D++ DG I EF ++
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+ KI + V S RE+ +L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPS-------------TAIREISLLK 57
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 58 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 46/297 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+ KI + V S RE+ +L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPS-------------TAIREISLLK 56
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK + +N +Y+ E +L + A + + Q+L+
Sbjct: 57 EL-NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y AP
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 283 EVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LR 326
E+L + D+WS+G I ++ R F +E D +F+ EV +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 327 NKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 28/294 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G++LG G ++A D + VAVK + + L R SF L+ +
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--LARDPSFY-LRF---------R 60
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKKDSRYTEKD 212
RE + AL H +V Y+ E + YI ME +G L D + + T K
Sbjct: 61 REAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKR 117
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG----K 268
A V+ + H +G++HRD+KP N L + +++K DFG++ I
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANILISAT---NAVKVVDFGIARAIADSGNSVX 174
Query: 269 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327
+ ++G+A Y++PE + S SDV+S+G + Y +L G PF + + + +R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGDASEIP 380
P +S V K L K+P R A + VR G+ E P
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 23/262 (8%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
+LG G FG ++ K + AVK ++K+ ++ QD VE E ++L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVI------QDDD------VECTMVEKRVL 395
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ + ++ F+ + +Y ME GG+L+ I ++ R+ E A ++
Sbjct: 396 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAI 453
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVA 281
G+++RD+K +N + S + +K DFG+ + I G + G+ Y+A
Sbjct: 454 GLFFLQSKGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENIWDGVTTKXFCGTPDYIA 510
Query: 282 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 340
PE++ + G D W+ GV+ Y +L G+ PF + ED +F+ ++ + + + S+S
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMS 566
Query: 341 NSAKDFVKKLLVKDPRARLTAA 362
A K L+ K P RL
Sbjct: 567 KEAVAICKGLMTKHPGKRLGCG 588
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 137/296 (46%), Gaps = 40/296 (13%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D DF++ LG G G + + K +G +A K I I P
Sbjct: 8 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPA 49
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
+ RE+++L +V FY AF D + I ME +GG LD++L KK R E
Sbjct: 50 IRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPE 106
Query: 211 ----KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 107 QILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI- 159
Query: 267 GKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK--E 323
+ + VG+ Y++PE L+ +SD+WS+G+ + GR P + IF+ +
Sbjct: 160 DEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFELLD 216
Query: 324 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ N+P + P S +DFV K L+K+P R Q + H +++ DA E+
Sbjct: 217 YIVNEPP-PKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 270
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 137/332 (41%), Gaps = 75/332 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VYI MEL + L I + D
Sbjct: 71 YREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD---- 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I ++ G F W+K +
Sbjct: 182 MTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----V 237
Query: 321 FKEVLRNKPDFRRKPWPSI----------------------------------SNSAKDF 346
+++ P+F +K P++ ++ A+D
Sbjct: 238 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDL 297
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
+ K+LV D R++ +AL HP++ D SE
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 139/349 (39%), Gaps = 63/349 (18%)
Query: 74 RRQTGV---IPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIE 130
RR GV +P G D RYT + +G G +G A D RVA+KKI
Sbjct: 18 RRTEGVGPGVPGEVEMVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKIS 77
Query: 131 KNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF-----YNAFEDDNYVY 185
F+ + RE++IL HENV+ + E VY
Sbjct: 78 ---------PFEHQTY-----CQRTLREIQILLRFR-HENVIGIRDILRASTLEAMRDVY 122
Query: 186 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245
I +L E L ++L K + + + Q+LR H ++HRD+KP N L
Sbjct: 123 IVQDLMETD--LYKLL--KSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLIN 178
Query: 246 SAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIG 299
+ LK DFGL+ P + V + +Y APE++ G D+WS+G
Sbjct: 179 TT---CDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVG 235
Query: 300 VITYILLCGRRPFWDKTE-------DGIF----------------KEVLRNKPDFRRKPW 336
I +L R F K GI + L++ P + W
Sbjct: 236 CILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAW 295
Query: 337 ----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
P + A D + ++L +P R+T +AL+HP++ + D ++ P+
Sbjct: 296 AKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPV 344
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 129/294 (43%), Gaps = 28/294 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G++LG G ++A D + VAVK + + L R SF L+ +
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--LARDPSFY-LRF---------R 60
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKKDSRYTEKD 212
RE + AL H +V Y+ E + YI ME +G L D + + T K
Sbjct: 61 REAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKR 117
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG----K 268
A V+ + H +G++HRD+KP N + + +++K DFG++ I
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVT 174
Query: 269 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327
+ ++G+A Y++PE + S SDV+S+G + Y +L G PF + + + +R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGDASEIP 380
P +S V K L K+P R A + VR G+ E P
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/150 (33%), Positives = 87/150 (58%), Gaps = 11/150 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +EE+ L++ F ID D +G+I+ +E++ L K + +L ES + +++ A D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAADIDK 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG- 525
G +D+ EF+AAT+H+++LE ++ +AF FD D G+IT +E++ G
Sbjct: 60 SGTIDYGEFIAATVHLNKLEREEN------LVSAFSYFDKDGSGYITLDEIQQACKDFGL 113
Query: 526 ---SIDPLLEEADIDKDGRISLSEFRRLLR 552
ID +++E D D DG+I EF ++R
Sbjct: 114 DDIHIDDMIKEIDQDNDGQIDYGEFAAMMR 143
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 135/312 (43%), Gaps = 58/312 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G A D +VAVKK+ + FQ L I RE+++L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSR--------PFQSL-----IHARRTYRELRLLK 82
Query: 164 ALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
L HENV+ + F ED + VY+ L G L+ I+ K +++ +V
Sbjct: 83 HLK-HENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIV--KSQALSDEHVQFLV 137
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
Q+LR H G++HRD+KP N + EDS L+ DFGL+ + ++ V +
Sbjct: 138 YQLLRGLKYIHSAGIIHRDLKPSNV---AVNEDSELRILDFGLAR--QADEEMTGYVATR 192
Query: 278 YYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPF----------------------- 312
+Y APE++ D+WS+G I LL G+ F
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV 252
Query: 313 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK----DFVKKLLVKDPRARLTAAQALSHP 368
K + +++ P +K SI A D + ++LV D R++AA+AL+H
Sbjct: 253 LAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHA 312
Query: 369 WVREGGDASEIP 380
+ + D + P
Sbjct: 313 YFSQYHDPEDEP 324
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 35/279 (12%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
+LGHG G T V + VAVK+I L SF D REV++L
Sbjct: 31 VLGHGAEG-TIVYRGMFDNRDVAVKRI-----LPECFSFAD-------------REVQLL 71
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ H NV++++ +D + YIA+ELC L + +KD + + +++Q
Sbjct: 72 RESDEHPNVIRYFCTEKDRQFQYIAIELC--AATLQEYVEQKDFAHLGLEPITLLQQTTS 129
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA--TDFGLSDFIKPGK----KFQDIVGS 276
A H +VHRD+KP N L +KA +DFGL + G+ + + G+
Sbjct: 130 GLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGT 189
Query: 277 AYYVAPEVLKR--KSGPES--DVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 331
++APE+L K P D++S G + Y ++ G PF + +L
Sbjct: 190 EGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ--ANILLGACSL 247
Query: 332 R-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
P A++ ++K++ DP+ R +A L HP+
Sbjct: 248 DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPF 286
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 23/262 (8%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
+LG G FG ++ K + AVK ++K+ ++ QD VE E ++L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVI------QDDD------VECTMVEKRVL 74
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ + ++ F+ + +Y ME GG+L+ I ++ R+ E A ++
Sbjct: 75 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAI 132
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVA 281
G+++RD+K +N + S + +K DFG+ + I G + G+ Y+A
Sbjct: 133 GLFFLQSKGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENIWDGVTTKXFCGTPDYIA 189
Query: 282 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 340
PE++ + G D W+ GV+ Y +L G+ PF + ED +F+ ++ + + + S+S
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMS 245
Query: 341 NSAKDFVKKLLVKDPRARLTAA 362
A K L+ K P RL
Sbjct: 246 KEAVAICKGLMTKHPGKRLGCG 267
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 137/310 (44%), Gaps = 59/310 (19%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
YT K++G+G FG + A D VA+KK+ ++K F++ R
Sbjct: 42 YTNCKVIGNGSFGVVFQA-KLVESDEVAIKKVLQDK------RFKN-------------R 81
Query: 158 EVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
E++I++ + H NVV FY+ + + V++ + L E + R ++ ++ +
Sbjct: 82 ELQIMR-IVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRA-SRHYAKLKQTMP 139
Query: 214 AVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
++++ Q+LR A H G+ HRD+KP+N L LK DFG + + G+
Sbjct: 140 MLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPP--SGVLKLIDFGSAKILIAGEP 197
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR- 326
+ S YY APE++ + + D+WS G + L+ G+ F ++ E+++
Sbjct: 198 NVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKV 257
Query: 327 -------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAA 362
P R P+ P A D + +LL P ARLTA
Sbjct: 258 LGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAI 317
Query: 363 QALSHPWVRE 372
+AL HP+ E
Sbjct: 318 EALCHPFFDE 327
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 143/312 (45%), Gaps = 33/312 (10%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G G Y ++ V
Sbjct: 20 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGSGSVYSGIRVSDNLPV 79
Query: 125 AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA-GHENVVKFYNAFE-DDN 182
A+K +EK++I D LP V EV +L+ ++ G V++ + FE D+
Sbjct: 80 AIKHVEKDRI-------SDWGE-LPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDS 130
Query: 183 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242
+V I +L D I + E+ A Q+L CH G++HRD+K EN
Sbjct: 131 FVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 188
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGV 300
L + LK DFG +K + D G+ Y PE ++ R G + VWS+G+
Sbjct: 189 LIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 245
Query: 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
+ Y ++CG PF D +E++R + FR++ +S+ + ++ L P R T
Sbjct: 246 LLYDMVCGDIPF---EHD---EEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPT 295
Query: 361 AAQALSHPWVRE 372
+ +HPW+++
Sbjct: 296 FEEIQNHPWMQD 307
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 137/303 (45%), Gaps = 44/303 (14%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D DF++ LG G G + + K +G +A K I I P
Sbjct: 5 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPA 46
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
+ RE+++L +V FY AF D + I ME +GG LD++L KK R E
Sbjct: 47 IRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPE 103
Query: 211 ----KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 104 QILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID 157
Query: 267 GKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPF--WDKTED----- 318
VG+ Y++PE L+ +SD+WS+G+ + GR P D ED
Sbjct: 158 SMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPM 216
Query: 319 GIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 376
IF+ + + N+P + P S +DFV K L+K+P R Q + H +++ DA
Sbjct: 217 AIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SDA 274
Query: 377 SEI 379
E+
Sbjct: 275 EEV 277
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 32/249 (12%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
D + T+G+ +G G FG Y K +GD VAVK + ++ P ++
Sbjct: 11 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKML-------------NVTAPTPQQLQA 54
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
K EV +L+ H N++ F + + I + CEG L + A ++++ K
Sbjct: 55 FKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLI 111
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQ 271
+ RQ R H ++HRD+K N ED+++K DFGL+ +F+
Sbjct: 112 DIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATVKSRWSGSHQFE 168
Query: 272 DIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLR 326
+ GS ++APEV++ + S P +SDV++ G++ Y L+ G+ P+ + D I + V R
Sbjct: 169 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 228
Query: 327 N--KPDFRR 333
PD +
Sbjct: 229 GSLSPDLSK 237
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 135/312 (43%), Gaps = 58/312 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G A D +VAVKK+ + FQ L I RE+++L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSR--------PFQSL-----IHARRTYRELRLLK 82
Query: 164 ALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
L HENV+ + F ED + VY+ L G L+ I+ K +++ +V
Sbjct: 83 HLK-HENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIV--KCQALSDEHVQFLV 137
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
Q+LR H G++HRD+KP N + EDS L+ DFGL+ + ++ V +
Sbjct: 138 YQLLRGLKYIHSAGIIHRDLKPSNV---AVNEDSELRILDFGLAR--QADEEMTGYVATR 192
Query: 278 YYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPF----------------------- 312
+Y APE++ D+WS+G I LL G+ F
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV 252
Query: 313 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK----DFVKKLLVKDPRARLTAAQALSHP 368
K + +++ P +K SI A D + ++LV D R++AA+AL+H
Sbjct: 253 LAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHA 312
Query: 369 WVREGGDASEIP 380
+ + D + P
Sbjct: 313 YFSQYHDPEDEP 324
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 128/294 (43%), Gaps = 28/294 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G++LG G ++A D VAVK + + L R SF L+ +
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--LARDPSFY-LRF---------R 60
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKKDSRYTEKD 212
RE + AL H +V Y+ E + YI ME +G L D + + T K
Sbjct: 61 REAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKR 117
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG----K 268
A V+ + H +G++HRD+KP N + + +++K DFG++ I
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVT 174
Query: 269 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327
+ ++G+A Y++PE + S SDV+S+G + Y +L G PF + + + +R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGDASEIP 380
P +S V K L K+P R A + VR G+ E P
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 34/273 (12%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G FG Y D + VA+K I+ + + Q +E+ +L
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ--------------QEITVLS 72
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ +++ ++ ++I ME GG LD + K E A ++R++L+
Sbjct: 73 Q-CDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILKG 128
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAP 282
H +HRD+K N L E +K DFG++ + + K VG+ +++AP
Sbjct: 129 LDYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 185
Query: 283 EVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-- 339
EV+K+ + ++D+WS+G+ L G P D + + +N P P++
Sbjct: 186 EVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------PTLEG 238
Query: 340 --SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
S K+FV+ L KDPR R TA + L H ++
Sbjct: 239 QHSKPFKEFVEACLNKDPRFRPTAKELLKHKFI 271
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 142/342 (41%), Gaps = 68/342 (19%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
R+ + ++ G G FG + +K+ G VA+KK+ QD +
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-----------IQDPRF--------RN 64
Query: 157 REVKILQALA--GHENVVK----FYNAFEDDN---YVYIAMELCEGGELLDRILAKKDSR 207
RE++I+Q LA H N+V+ FY E D Y+ + ME + L R R
Sbjct: 65 RELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCCRNYYRR 122
Query: 208 YTEKDAAVV---VRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 262
++ + Q++R HL + HRD+KP N L A D +LK DFG +
Sbjct: 123 QVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA--DGTLKLCDFGSAK 180
Query: 263 FIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 320
+ P + + S YY APE++ + D+WS+G I ++ G F G
Sbjct: 181 KLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ 240
Query: 321 FKEVLR----NKPDFRRK----------------PWPSI--------SNSAKDFVKKLLV 352
E++R + RK PW ++ + A D + LL
Sbjct: 241 LHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQ 300
Query: 353 KDPRARLTAAQALSHPWVREGGD-ASEIPIDISVLNNMRQFV 393
P R+ +AL HP+ E D A+++P + + ++ +F+
Sbjct: 301 YLPEERMKPYEALCHPYFDELHDPATKLPNNKDLPEDLFRFL 342
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 124/280 (44%), Gaps = 26/280 (9%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D + +T + +G G FG + D VA+K I+ + + Q
Sbjct: 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ---------- 68
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
+E+ +L V K+Y ++ D ++I ME GG LD + + E
Sbjct: 69 ----QEITVLSQ-CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQ 120
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQ 271
A ++R++L+ H +HRD+K N L E +K DFG++ + + K
Sbjct: 121 IATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRN 177
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
VG+ +++APEV+K+ + ++D+WS+G+ L G P + + + +N P
Sbjct: 178 XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP 237
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
+ S K+FV+ L K+P R TA + L H ++
Sbjct: 238 TLEG---NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 32/249 (12%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
D + T+G+ +G G FG Y K +GD VAVK + ++ P ++
Sbjct: 23 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKML-------------NVTAPTPQQLQA 66
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
K EV +L+ H N++ F + + I + CEG L + A ++++ K
Sbjct: 67 FKNEVGVLRKTR-HVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLI 123
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQ 271
+ RQ R H ++HRD+K N ED+++K DFGL+ +F+
Sbjct: 124 DIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 272 DIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLR 326
+ GS ++APEV++ + S P +SDV++ G++ Y L+ G+ P+ + D I + V R
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
Query: 327 N--KPDFRR 333
PD +
Sbjct: 241 GSLSPDLSK 249
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 32/249 (12%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
D + T+G+ +G G FG Y K +GD VAVK + ++ P ++
Sbjct: 23 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKML-------------NVTAPTPQQLQA 66
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
K EV +L+ H N++ F + + I + CEG L + A ++++ K
Sbjct: 67 FKNEVGVLRKTR-HVNILLFM-GYSTAPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLI 123
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQ 271
+ RQ R H ++HRD+K N ED+++K DFGL+ +F+
Sbjct: 124 DIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 272 DIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLR 326
+ GS ++APEV++ + S P +SDV++ G++ Y L+ G+ P+ + D I + V R
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
Query: 327 N--KPDFRR 333
PD +
Sbjct: 241 GSLSPDLSK 249
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 26/269 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G FG + D VA+K I+ + + Q +E+ +L
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--------------QEITVLS 80
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
V K+Y ++ D ++I ME GG LD + + E A ++R++L+
Sbjct: 81 Q-CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKG 136
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAP 282
H +HRD+K N L E +K DFG++ + + K VG+ +++AP
Sbjct: 137 LDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 193
Query: 283 EVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341
EV+K+ + ++D+WS+G+ L G P + + + +N P + S
Sbjct: 194 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SK 250
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWV 370
K+FV+ L K+P R TA + L H ++
Sbjct: 251 PLKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 124/280 (44%), Gaps = 26/280 (9%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D + +T + +G G FG + D VA+K I+ + + Q
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ---------- 53
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
+E+ +L V K+Y ++ D ++I ME GG LD + + E
Sbjct: 54 ----QEITVLSQ-CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQ 105
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQ 271
A ++R++L+ H +HRD+K N L E +K DFG++ + + K
Sbjct: 106 IATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRN 162
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
VG+ +++APEV+K+ + ++D+WS+G+ L G P + + + +N P
Sbjct: 163 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP 222
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
+ S K+FV+ L K+P R TA + L H ++
Sbjct: 223 TLEG---NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 124/280 (44%), Gaps = 26/280 (9%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D + +T + +G G FG + D VA+K I+ + + Q
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ---------- 53
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
+E+ +L V K+Y ++ D ++I ME GG LD + + E
Sbjct: 54 ----QEITVLSQ-CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQ 105
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQ 271
A ++R++L+ H +HRD+K N L E +K DFG++ + + K
Sbjct: 106 IATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRN 162
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
VG+ +++APEV+K+ + ++D+WS+G+ L G P + + + +N P
Sbjct: 163 XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP 222
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
+ S K+FV+ L K+P R TA + L H ++
Sbjct: 223 TLEG---NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 127/294 (43%), Gaps = 28/294 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G++LG G ++A D VAVK + + L R SF L+ +
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--LARDPSFY-LRF---------R 60
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKKDSRYTEKD 212
RE + AL H +V Y E + YI ME +G L D + + T K
Sbjct: 61 REAQNAAAL-NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKR 117
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG----K 268
A V+ + H +G++HRD+KP N + + +++K DFG++ I
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVT 174
Query: 269 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327
+ ++G+A Y++PE + S SDV+S+G + Y +L G PF + + + +R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGDASEIP 380
P +S V K L K+P R A + VR G+ E P
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 58/312 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G A D +VAVKK+ + FQ L I RE+++L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSR--------PFQSL-----IHARRTYRELRLLK 74
Query: 164 ALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
L HENV+ + F ED + VY+ L G L+ I+ K +++ +V
Sbjct: 75 HLK-HENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIV--KCQALSDEHVQFLV 129
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
Q+LR H G++HRD+KP N + ED L+ DFGL+ + ++ V +
Sbjct: 130 YQLLRGLKYIHSAGIIHRDLKPSNV---AVNEDCELRILDFGLAR--QADEEMTGYVATR 184
Query: 278 YYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPF----------------------- 312
+Y APE++ D+WS+G I LL G+ F
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV 244
Query: 313 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK----DFVKKLLVKDPRARLTAAQALSHP 368
K + +++ P +K SI A D + ++LV D R++AA+AL+H
Sbjct: 245 LAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHA 304
Query: 369 WVREGGDASEIP 380
+ + D + P
Sbjct: 305 YFSQYHDPEDEP 316
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 29/303 (9%)
Query: 78 GVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR 137
G++P G + RY +G++LG G ++A D VAVK + + L R
Sbjct: 13 GLVPRG--SHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--LAR 68
Query: 138 VVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV----YIAMELCEG 193
SF L+ +RE + AL H +V Y+ E + YI ME +G
Sbjct: 69 DPSFY-LRF---------RREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDG 117
Query: 194 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
L D + + T K A V+ + H +G++HRD+KP N + + +++
Sbjct: 118 VTLRD--IVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAV 172
Query: 254 KATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 308
K DFG++ I + ++G+A Y++PE + S SDV+S+G + Y +L G
Sbjct: 173 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
Query: 309 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
PF + + + +R P +S V K L K+P R A +
Sbjct: 233 EPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 292
Query: 369 WVR 371
VR
Sbjct: 293 LVR 295
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 215
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 78 ILQNLCGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 129
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 276 SAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 322
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 323 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 359
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 360 TAAQALSHPWVRE 372
TA +A++HP+ ++
Sbjct: 308 TALEAMTHPYFQQ 320
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 215
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 78 ILQNLCGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 129
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 276 SAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 322
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 323 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 359
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 360 TAAQALSHPWVRE 372
TA +A++HP+ ++
Sbjct: 308 TALEAMTHPYFQQ 320
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 215
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 80 ILQNLCGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 131
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 132 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 189
Query: 276 SAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 322
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 190 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 249
Query: 323 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 359
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 250 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 309
Query: 360 TAAQALSHPWVRE 372
TA +A++HP+ ++
Sbjct: 310 TALEAMTHPYFQQ 322
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 215
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 79 ILQNLCGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 130
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 131 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 188
Query: 276 SAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 322
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 189 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 248
Query: 323 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 359
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 249 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 308
Query: 360 TAAQALSHPWVRE 372
TA +A++HP+ ++
Sbjct: 309 TALEAMTHPYFQQ 321
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 215
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 78 ILQNLMGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 129
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 276 SAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 322
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 323 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 359
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 360 TAAQALSHPWVRE 372
TA +A++HP+ ++
Sbjct: 308 TALEAMTHPYFQQ 320
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 215
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 78 ILQNLXGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 129
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 276 SAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 322
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 323 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 359
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 360 TAAQALSHPWVRE 372
TA +A++HP+ ++
Sbjct: 308 TALEAMTHPYFQQ 320
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 215
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 78 ILQNLXGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 129
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 276 SAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 322
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 323 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 359
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 360 TAAQALSHPWVRE 372
TA +A++HP+ ++
Sbjct: 308 TALEAMTHPYFQQ 320
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 215
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 78 ILQNLXGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 129
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 276 SAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 322
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 323 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 359
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 360 TAAQALSHPWVRE 372
TA +A++HP+ ++
Sbjct: 308 TALEAMTHPYFQQ 320
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 215
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 79 ILQNLXGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 130
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 131 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 188
Query: 276 SAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 322
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 189 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 248
Query: 323 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 359
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 249 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 308
Query: 360 TAAQALSHPWVRE 372
TA +A++HP+ ++
Sbjct: 309 TALEAMTHPYFQQ 321
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 130/299 (43%), Gaps = 56/299 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G + A ++ + VA+K+ V D +P RE+ +L+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKR----------VRLDDDDEGVP---SSALREICLLK 56
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVV---VRQ 219
L H+N+V+ ++ D + + E C D+ L K DS + D +V + Q
Sbjct: 57 ELK-HKNIVRLHDVLHSDKKLTLVFEFC------DQDLKKYFDSCNGDLDPEIVKSFLFQ 109
Query: 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 278
+L+ CH ++HRD+KP+N L E LK DFGL+ F P + + V + +
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGE---LKLADFGLARAFGIPVRCYSAEVVTLW 166
Query: 279 YVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLR--------- 326
Y P+VL + D+WS G I L RP + + D K + R
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQ 226
Query: 327 -----NKPDFRRKPW-----------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
PD++ P P ++ + +D ++ LL +P R++A +AL HP+
Sbjct: 227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 122/273 (44%), Gaps = 34/273 (12%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G FG + D VA+K I+ + + Q +E+ +L
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ--------------QEITVLS 76
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
V K+Y ++ + ++I ME GG LD + A + E A +++++L+
Sbjct: 77 Q-CDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKG 132
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAP 282
H +HRD+K N L E +K DFG++ + + K VG+ +++AP
Sbjct: 133 LDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 189
Query: 283 EVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-- 339
EV+++ + ++D+WS+G+ L G P D + + +N P P++
Sbjct: 190 EVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------PTLVG 242
Query: 340 --SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
+ S K+F+ L KDP R TA + L H ++
Sbjct: 243 DFTKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 145/322 (45%), Gaps = 52/322 (16%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-----EKNKIL--IRVVSFQDLKMIL 148
++Y++GK LG G FG D +G R A+KK+ KN+ L ++V+ ++ ++
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLV 66
Query: 149 PIAVEDVKREVKILQA------LAGHENVVKFYNAF-----EDDNYVYIAMELCEGGELL 197
E K Q L G N V ++ + Y+ + ME + L
Sbjct: 67 DYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP--DTL 124
Query: 198 DRILAK--KDSRYTEKD-AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254
++L + R + ++ + Q+ R H G+ HRD+KP+N L S +D++LK
Sbjct: 125 HKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS--KDNTLK 182
Query: 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF 312
DFG + + P + + S +Y APE++ + P D+WSIG + L+ G+ F
Sbjct: 183 LCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF 242
Query: 313 WDKTE-DGIFK-----------EVLRNKPDFRRKPWPSI-------------SNSAKDFV 347
+T D + + +++R P + +P++ + A D +
Sbjct: 243 SGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLL 302
Query: 348 KKLLVKDPRARLTAAQALSHPW 369
+++L +P R+ +A++HP+
Sbjct: 303 EQILRYEPDLRINPYEAMAHPF 324
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 109/253 (43%), Gaps = 51/253 (20%)
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 215
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 99 ILQNLXGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 150
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 151 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 208
Query: 276 SAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW------------------DK 315
S Y+ PE+L + D+WS+G + ++ + PF+ D
Sbjct: 209 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 268
Query: 316 TEDGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 359
+ K + P RKPW N+ A DF+ KLL D + RL
Sbjct: 269 LNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 328
Query: 360 TAAQALSHPWVRE 372
TA +A++HP+ ++
Sbjct: 329 TALEAMTHPYFQQ 341
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 123/311 (39%), Gaps = 70/311 (22%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G FG + A + G +VA+KK V ++ K PI RE+KILQ
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKK----------VLMENEKEGFPIT---ALREIKILQ 72
Query: 164 ALAGHENVVKF----------YNAFEDDNYVYIAMELCEG--GELLDRILAKKDSRYTEK 211
L HENVV YN + +Y+ + CE LL +L K +T
Sbjct: 73 LLK-HENVVNLIEICRTKASPYNRCKGS--IYLVFDFCEHDLAGLLSNVLVK----FTLS 125
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--- 268
+ V++ +L H + ++HRDMK N L D LK DFGL+ K
Sbjct: 126 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQ 182
Query: 269 --KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324
++ + V + +Y PE+L +R GP D+W G I + TE +
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
Query: 325 LRNKPDFRRKPWPSISN----------------------------SAKDFVKKLLVKDPR 356
+ + WP++ N A D + KLLV DP
Sbjct: 243 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 302
Query: 357 ARLTAAQALSH 367
R+ + AL+H
Sbjct: 303 QRIDSDDALNH 313
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
T+ D + ++L+ CH G++HRD+KP N L E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 313
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 314 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 352
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 353 KDPRARLTAAQALSHPW 369
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 130/299 (43%), Gaps = 56/299 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G + A ++ + VA+K+ V D +P RE+ +L+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKR----------VRLDDDDEGVP---SSALREICLLK 56
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVV---VRQ 219
L H+N+V+ ++ D + + E C D+ L K DS + D +V + Q
Sbjct: 57 ELK-HKNIVRLHDVLHSDKKLTLVFEFC------DQDLKKYFDSCNGDLDPEIVKSFLFQ 109
Query: 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 278
+L+ CH ++HRD+KP+N L E LK +FGL+ F P + + V + +
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGE---LKLANFGLARAFGIPVRCYSAEVVTLW 166
Query: 279 YVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLR--------- 326
Y P+VL + D+WS G I L RP + + D K + R
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQ 226
Query: 327 -----NKPDFRRKPW-----------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
PD++ P P ++ + +D ++ LL +P R++A +AL HP+
Sbjct: 227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 123/311 (39%), Gaps = 70/311 (22%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G FG + A + G +VA+KK V ++ K PI RE+KILQ
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKK----------VLMENEKEGFPIT---ALREIKILQ 71
Query: 164 ALAGHENVVKF----------YNAFEDDNYVYIAMELCEG--GELLDRILAKKDSRYTEK 211
L HENVV YN + +Y+ + CE LL +L K +T
Sbjct: 72 LLK-HENVVNLIEICRTKASPYNRCKGS--IYLVFDFCEHDLAGLLSNVLVK----FTLS 124
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--- 268
+ V++ +L H + ++HRDMK N L D LK DFGL+ K
Sbjct: 125 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQ 181
Query: 269 --KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324
++ + V + +Y PE+L +R GP D+W G I + TE +
Sbjct: 182 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 241
Query: 325 LRNKPDFRRKPWPSISN----------------------------SAKDFVKKLLVKDPR 356
+ + WP++ N A D + KLLV DP
Sbjct: 242 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 301
Query: 357 ARLTAAQALSH 367
R+ + AL+H
Sbjct: 302 QRIDSDDALNH 312
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 123/311 (39%), Gaps = 70/311 (22%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G FG + A + G +VA+KK V ++ K PI RE+KILQ
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKK----------VLMENEKEGFPIT---ALREIKILQ 72
Query: 164 ALAGHENVVKF----------YNAFEDDNYVYIAMELCEG--GELLDRILAKKDSRYTEK 211
L HENVV YN + +Y+ + CE LL +L K +T
Sbjct: 73 LLK-HENVVNLIEICRTKASPYNRCKGS--IYLVFDFCEHDLAGLLSNVLVK----FTLS 125
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--- 268
+ V++ +L H + ++HRDMK N L D LK DFGL+ K
Sbjct: 126 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQ 182
Query: 269 --KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324
++ + V + +Y PE+L +R GP D+W G I + TE +
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
Query: 325 LRNKPDFRRKPWPSISN----------------------------SAKDFVKKLLVKDPR 356
+ + WP++ N A D + KLLV DP
Sbjct: 243 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 302
Query: 357 ARLTAAQALSH 367
R+ + AL+H
Sbjct: 303 QRIDSDDALNH 313
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 123/311 (39%), Gaps = 70/311 (22%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G FG + A + G +VA+KK V ++ K PI RE+KILQ
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKK----------VLMENEKEGFPIT---ALREIKILQ 72
Query: 164 ALAGHENVVKF----------YNAFEDDNYVYIAMELCEG--GELLDRILAKKDSRYTEK 211
L HENVV YN + +Y+ + CE LL +L K +T
Sbjct: 73 LLK-HENVVNLIEICRTKASPYNRCKAS--IYLVFDFCEHDLAGLLSNVLVK----FTLS 125
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--- 268
+ V++ +L H + ++HRDMK N L D LK DFGL+ K
Sbjct: 126 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQ 182
Query: 269 --KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324
++ + V + +Y PE+L +R GP D+W G I + TE +
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
Query: 325 LRNKPDFRRKPWPSISN----------------------------SAKDFVKKLLVKDPR 356
+ + WP++ N A D + KLLV DP
Sbjct: 243 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 302
Query: 357 ARLTAAQALSH 367
R+ + AL+H
Sbjct: 303 QRIDSDDALNH 313
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 313
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 314 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 352
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 353 KDPRARLTAAQALSHPW 369
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 313
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 314 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 352
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 353 KDPRARLTAAQALSHPW 369
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 313
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 314 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 352
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 353 KDPRARLTAAQALSHPW 369
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 127 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 184
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 313
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 244
Query: 314 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 352
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 245 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 304
Query: 353 KDPRARLTAAQALSHPW 369
D ++RLTA +A+ HP+
Sbjct: 305 YDHQSRLTAREAMEHPY 321
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 313
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 314 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 352
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 353 KDPRARLTAAQALSHPW 369
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 185
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 313
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 245
Query: 314 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 352
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 246 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 305
Query: 353 KDPRARLTAAQALSHPW 369
D ++RLTA +A+ HP+
Sbjct: 306 YDHQSRLTAREAMEHPY 322
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 313
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 314 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 352
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 353 KDPRARLTAAQALSHPW 369
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 313
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 314 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 352
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 353 KDPRARLTAAQALSHPW 369
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 313
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 314 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 352
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 353 KDPRARLTAAQALSHPW 369
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 185
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 313
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 245
Query: 314 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 352
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 246 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 305
Query: 353 KDPRARLTAAQALSHPW 369
D ++RLTA +A+ HP+
Sbjct: 306 YDHQSRLTAREAMEHPY 322
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 313
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 314 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 352
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 353 KDPRARLTAAQALSHPW 369
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 134 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 191
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 313
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 192 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 251
Query: 314 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 352
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 252 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 311
Query: 353 KDPRARLTAAQALSHPW 369
D ++RLTA +A+ HP+
Sbjct: 312 YDHQSRLTAREAMEHPY 328
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 139/313 (44%), Gaps = 55/313 (17%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDR-VAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
D++Y +G G +G + A D NG R VA+K+ V Q + +P++
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKR----------VRVQTGEEGMPLST- 58
Query: 154 DVKREVKILQALAG--HENVVKFYNAF-----EDDNYVYIAMELCEG--GELLDRILAKK 204
REV +L+ L H NVV+ ++ + + + + E + LD++
Sbjct: 59 --IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG 116
Query: 205 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264
T KD ++ Q+LR H H +VHRD+KP+N L S+ + +K DFGL+
Sbjct: 117 VPTETIKD---MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIY 170
Query: 265 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED----G 319
+V + +Y APEVL + S D+WS+G I + + R+P + + D G
Sbjct: 171 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLG 229
Query: 320 IFKEV--LRNKPDFRR------------------KPWPSISNSAKDFVKKLLVKDPRARL 359
+V L + D+ R K I KD + K L +P R+
Sbjct: 230 KILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI 289
Query: 360 TAAQALSHPWVRE 372
+A ALSHP+ ++
Sbjct: 290 SAYSALSHPYFQD 302
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 313
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 314 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 352
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 353 KDPRARLTAAQALSHPW 369
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 37/224 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FGY + G++VA+K+ + + P E E++I++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE--------------LSPKNRERWCLEIQIMK 68
Query: 164 ALAGHENVVKF------YNAFEDDNYVYIAMELCEGGELLDRI--------LAKKDSRYT 209
L H NVV ++ +AME CEGG+L + L + R
Sbjct: 69 KL-NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 127
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
D + +R + H + ++HRD+KPEN + + + K D G + + G+
Sbjct: 128 LSDISSALRYL-------HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 180
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF 312
+ VG+ Y+APE+L++K + D WS G + + + G RPF
Sbjct: 181 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 14/210 (6%)
Query: 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 230
VV A+E + + + + L GG+L I + + E A ++ + H
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 231 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSG 290
+V+RD+KPEN L + ++ +D GL+ + G+ + VG+ Y+APEV+K +
Sbjct: 306 RIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERY 362
Query: 291 PES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 349
S D W++G + Y ++ G+ PF + + +EV R + + S A+ +
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQ 422
Query: 350 LLVKDPRARLTAAQALSHPWVREGGDASEI 379
LL KDP RL GG A E+
Sbjct: 423 LLCKDPAERLGC----------RGGSAREV 442
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 37/224 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FGY + G++VA+K+ + + P E E++I++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE--------------LSPKNRERWCLEIQIMK 67
Query: 164 ALAGHENVVKF------YNAFEDDNYVYIAMELCEGGELLDRI--------LAKKDSRYT 209
L H NVV ++ +AME CEGG+L + L + R
Sbjct: 68 KL-NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 126
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
D + +R + H + ++HRD+KPEN + + + K D G + + G+
Sbjct: 127 LSDISSALRYL-------HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 179
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF 312
+ VG+ Y+APE+L++K + D WS G + + + G RPF
Sbjct: 180 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 14/210 (6%)
Query: 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 230
VV A+E + + + + L GG+L I + + E A ++ + H
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 231 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSG 290
+V+RD+KPEN L + ++ +D GL+ + G+ + VG+ Y+APEV+K +
Sbjct: 306 RIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERY 362
Query: 291 PES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 349
S D W++G + Y ++ G+ PF + + +EV R + + S A+ +
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQ 422
Query: 350 LLVKDPRARLTAAQALSHPWVREGGDASEI 379
LL KDP RL GG A E+
Sbjct: 423 LLCKDPAERLGC----------RGGSAREV 442
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 133/331 (40%), Gaps = 91/331 (27%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDR-VAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
D++Y +G G +G + A D NG R VA+K+ V Q + +P++
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKR----------VRVQTGEEGMPLST- 58
Query: 154 DVKREVKILQALAG--HENVVKFYNAF-----EDDNYVYIAMELCEG--GELLDRILAKK 204
REV +L+ L H NVV+ ++ + + + + E + LD++
Sbjct: 59 --IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG 116
Query: 205 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264
T KD ++ Q+LR H H +VHRD+KP+N L S+ + +K DFGL+
Sbjct: 117 VPTETIKD---MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIY 170
Query: 265 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
+V + +Y APEVL + S D+WS+G IF E
Sbjct: 171 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGC-------------------IFAE 211
Query: 324 VLRNKPDFR-------------------RKPWP-----------------------SISN 341
+ R KP FR + WP I
Sbjct: 212 MFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDE 271
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
KD + K L +P R++A ALSHP+ ++
Sbjct: 272 LGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 32/230 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ + +LG G + K GD A+K F ++ + P+ V+ R
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIK------------VFNNISFLRPVDVQ--MR 56
Query: 158 EVKILQALAGHENVVKFYNAFEDDN---YVYIAMELCEGGELLDRILAKKDSRY--TEKD 212
E ++L+ L H+N+VK + A E++ + + ME C G L +L + + Y E +
Sbjct: 57 EFEVLKKL-NHKNIVKLF-AIEEETTTRHKVLIMEFCPCGSLYT-VLEEPSNAYGLPESE 113
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL-KATDFGLSDFIKPGKKFQ 271
+V+R ++ +G+VHR++KP N + ++ S+ K TDFG + ++ ++F
Sbjct: 114 FLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173
Query: 272 DIVGSAYYVAPEVLKR---------KSGPESDVWSIGVITYILLCGRRPF 312
+ G+ Y+ P++ +R K G D+WSIGV Y G PF
Sbjct: 174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDR-VAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
D++Y +G G +G + A D NG R VA+K+ V Q + +P++
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKR----------VRVQTGEEGMPLST- 58
Query: 154 DVKREVKILQALAG--HENVVKFYNAF-----EDDNYVYIAMELCEG--GELLDRILAKK 204
REV +L+ L H NVV+ ++ + + + + E + LD++
Sbjct: 59 --IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG 116
Query: 205 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264
T KD ++ Q+LR H H +VHRD+KP+N L S+ + +K DFGL+
Sbjct: 117 VPTETIKD---MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIY 170
Query: 265 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED----G 319
+V + +Y APEVL + S D+WS+G I + + R+P + + D G
Sbjct: 171 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLG 229
Query: 320 IFKEV--LRNKPDFRR------------------KPWPSISNSAKDFVKKLLVKDPRARL 359
+V L + D+ R K I KD + K L +P R+
Sbjct: 230 KILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI 289
Query: 360 TAAQALSHPW 369
+A ALSHP+
Sbjct: 290 SAYSALSHPY 299
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 113/248 (45%), Gaps = 58/248 (23%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIE-KNKILIRVVSFQDLKMILPIAVEDVKREVK 160
+ LG G FG + A +K + A+K+I N+ L R E V REVK
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR---------------EKVMREVK 55
Query: 161 ILQALAGHENVVKFYNAFEDDN------------YVYIAMELCEGGELLDRILAKKDSRY 208
L L H +V+++NA+ + N Y+YI M+LC L D + + R
Sbjct: 56 ALAKLE-HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM----NGRC 110
Query: 209 T--EKDAAVVVRQMLRVAAEC---HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
T E++ +V + L++A H GL+HRD+KP N F D +K DFGL
Sbjct: 111 TIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTA 167
Query: 264 IKPGKKFQDI-------------VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGR 309
+ ++ Q + VG+ Y++PE + S + D++S+G+I + LL
Sbjct: 168 MDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL--- 224
Query: 310 RPFWDKTE 317
PF + E
Sbjct: 225 YPFSTQME 232
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 32/230 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ + +LG G + K GD A+K F ++ + P+ V+ R
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIK------------VFNNISFLRPVDVQ--MR 56
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYV---YIAMELCEGGELLDRILAKKDSRY--TEKD 212
E ++L+ L H+N+VK + A E++ + ME C G L +L + + Y E +
Sbjct: 57 EFEVLKKL-NHKNIVKLF-AIEEETTTRHKVLIMEFCPCGSLYT-VLEEPSNAYGLPESE 113
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL-KATDFGLSDFIKPGKKFQ 271
+V+R ++ +G+VHR++KP N + ++ S+ K TDFG + ++ ++F
Sbjct: 114 FLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173
Query: 272 DIVGSAYYVAPEVLKR---------KSGPESDVWSIGVITYILLCGRRPF 312
+ G+ Y+ P++ +R K G D+WSIGV Y G PF
Sbjct: 174 XLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 36/294 (12%)
Query: 112 TYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK-REVKILQALAGHEN 170
TY+ DK A K+K+ +V+ +++++ REV +L+ L H N
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK-HAN 61
Query: 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 230
+V ++ + + + E + L + L + + + + Q+LR A CH
Sbjct: 62 IVTLHDIIHTEKSLTLVFEYLDKD--LKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 231 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKS 289
++HRD+KP+N L E LK DFGL+ P K + + V + +Y P++L +
Sbjct: 120 KVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGST 176
Query: 290 --GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------- 326
+ D+W +G I Y + GR F T + + R
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT 236
Query: 327 -NKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375
N P +R + P + + D + KLL + R R++A A+ HP+ G+
Sbjct: 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 115/269 (42%), Gaps = 37/269 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG + DK G + AVKK +R+ F+ + L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKK-------VRLEVFR----------------AEELM 118
Query: 164 ALAG--HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
A AG +V Y A + +V I MEL EGG L L K+ E A + Q L
Sbjct: 119 ACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ--LVKEQGCLPEDRALYYLGQAL 176
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV------G 275
H ++H D+K +N L S ++L DFG + ++P +D++ G
Sbjct: 177 EGLEYLHSRRILHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKDLLTGDYIPG 234
Query: 276 SAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
+ ++APE VL R + DVWS + +L G P+ + ++ P R
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREI 294
Query: 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQ 363
P PS + +++ L K+P R++AA+
Sbjct: 295 P-PSCAPLTAQAIQEGLRKEPIHRVSAAE 322
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 125/290 (43%), Gaps = 37/290 (12%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
+LG G FG A + + A+KKI + + + L ++ +A + + V+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI----LSEVMLLASLNHQYVVRYY 68
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
A N VK A + + ++I ME CE G L D I ++ ++ + + RQ+L
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQ-QRDEYWRLFRQILE 127
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------DFIK------PGK- 268
+ H G++HRD+KP N E ++K DFGL+ D +K PG
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 269 -KFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325
+G+A YVA EVL + D++S+G+I + ++ PF E + L
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKL 241
Query: 326 RN-----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
R+ PDF K ++ L+ DP R A L+ W+
Sbjct: 242 RSVSIEFPPDFDDNKM----KVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 114/269 (42%), Gaps = 37/269 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG + DK G + AVKK +R+ F+ + L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKK-------VRLEVFR----------------AEELM 137
Query: 164 ALAG--HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
A AG +V Y A + +V I MEL EGG L L K+ E A + Q L
Sbjct: 138 ACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ--LVKEQGCLPEDRALYYLGQAL 195
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKKFQD---IVG 275
H ++H D+K +N L S ++L DFG + ++P GK I G
Sbjct: 196 EGLEYLHSRRILHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 276 SAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
+ ++APE VL R + DVWS + +L G P+ + ++ P R
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREI 313
Query: 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQ 363
P PS + +++ L K+P R++AA+
Sbjct: 314 P-PSCAPLTAQAIQEGLRKEPIHRVSAAE 341
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + DG
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGDGT 362
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 526
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 363 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 417
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 418 DEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 130/317 (41%), Gaps = 69/317 (21%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
DR I KL G G +G Y A D + VA+K+I + + + A+
Sbjct: 33 IDRYRRITKL-GEGTYGEVYKAIDTVTNETVAIKRIRLE---------HEEEGVPGTAI- 81
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
REV +L+ L H N+++ + ++ +++ E E +Y +K+
Sbjct: 82 ---REVSLLKELQ-HRNIIELKSVIHHNHRLHLIFEYAE----------NDLKKYMDKNP 127
Query: 214 AVVVR-------QMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DF 263
V +R Q++ CH +HRD+KP+N L A E LK DFGL+ F
Sbjct: 128 DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187
Query: 264 IKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGI 320
P ++F + + +Y PE+L R D+WSI I +L F +E D +
Sbjct: 188 GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQL 247
Query: 321 FK--EVLRNKPDFRRKPWPSIS------NSAKDFVKK--------------------LLV 352
FK EVL PD WP ++ S F K +L
Sbjct: 248 FKIFEVL-GLPD--DTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLE 304
Query: 353 KDPRARLTAAQALSHPW 369
DP R++A AL HP+
Sbjct: 305 MDPVKRISAKNALEHPY 321
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 29/225 (12%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
D + T+G+ +G G FG Y K +GD VAVK + ++ P ++
Sbjct: 34 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKML-------------NVTAPTPQQLQA 77
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
K EV +L+ H N++ F + + I + CEG L L ++++
Sbjct: 78 FKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLI 134
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQ 271
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 135 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFE 191
Query: 272 DIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 312
+ GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 192 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 29/225 (12%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
D + T+G+ +G G FG Y K +GD VAVK + ++ P ++
Sbjct: 35 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKML-------------NVTAPTPQQLQA 78
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
K EV +L+ H N++ F + + I + CEG L L ++++
Sbjct: 79 FKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLI 135
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQ 271
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 136 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFE 192
Query: 272 DIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 312
+ GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 138/318 (43%), Gaps = 52/318 (16%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-- 129
+S +QTG + G + Y + + +G++ G G G + + G +AVK++
Sbjct: 5 SSGKQTGYLTIGGQR---YQAEINDLENLGEM-GSGTCGQVWKMRFRKTGHVIAVKQMRR 60
Query: 130 ----EKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN--VVKFYNAFEDDNY 183
E+NK ++ DL ++L H+ +V+ + F +
Sbjct: 61 SGNKEENKRIL-----MDLDVVL-----------------KSHDCPYIVQCFGTFITNTD 98
Query: 184 VYIAMEL---CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 240
V+IAMEL C +L R+ R K +V+ + + + HG++HRD+KP
Sbjct: 99 VFIAMELMGTC-AEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK---HGVIHRDVKPS 154
Query: 241 NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL------KRKSGPESD 294
N L E +K DFG+S + K G A Y+APE + K +D
Sbjct: 155 NILL---DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRAD 211
Query: 295 VWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 353
VWS+G+ L G+ P+ + KT+ + +VL+ +P S + FVK L K
Sbjct: 212 VWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHM-GFSGDFQSFVKDCLTK 270
Query: 354 DPRARLTAAQALSHPWVR 371
D R R + L H +++
Sbjct: 271 DHRKRPKYNKLLEHSFIK 288
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 29/225 (12%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
D + T+G+ +G G FG Y K +GD VAVK + ++ P ++
Sbjct: 9 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKML-------------NVTAPTPQQLQA 52
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
K EV +L+ H N++ F + + I + CEG L L ++++
Sbjct: 53 FKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLI 109
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQ 271
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 110 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFE 166
Query: 272 DIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 312
+ GS ++APEV+ K +SDV++ G++ Y L+ G+ P+
Sbjct: 167 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 29/225 (12%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
D + T+G+ +G G FG Y K +GD VAVK + ++ P ++
Sbjct: 12 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKML-------------NVTAPTPQQLQA 55
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
K EV +L+ H N++ F + + I + CEG L L ++++
Sbjct: 56 FKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLI 112
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQ 271
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 113 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 272 DIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 312
+ GS ++APEV+ K +SDV++ G++ Y L+ G+ P+
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 87/152 (57%), Gaps = 12/152 (7%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
L L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 358
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTG 522
DG +DF EF+ T+ +++ DSE+ + AF FD D +G+I+ ELR + G
Sbjct: 359 GDGTIDFPEFL--TMMARKMKYTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 413
Query: 523 LKGS---IDPLLEEADIDKDGRISLSEFRRLL 551
K + +D ++ EADID DG+++ EF +++
Sbjct: 414 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 29/225 (12%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
D + T+G+ +G G FG Y K +GD VAVK + ++ P ++
Sbjct: 7 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKML-------------NVTAPTPQQLQA 50
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
K EV +L+ H N++ F + + I + CEG L L ++++
Sbjct: 51 FKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLI 107
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQ 271
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 272 DIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 312
+ GS ++APEV+ K +SDV++ G++ Y L+ G+ P+
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 29/225 (12%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
D + T+G+ +G G FG Y K +GD VAVK + ++ P ++
Sbjct: 12 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKML-------------NVTAPTPQQLQA 55
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
K EV +L+ H N++ F + + I + CEG L L ++++
Sbjct: 56 FKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLI 112
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQ 271
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 113 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 272 DIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 312
+ GS ++APEV+ K +SDV++ G++ Y L+ G+ P+
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 72.8 bits (177), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 88/154 (57%), Gaps = 12/154 (7%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 523
+G +DF EF+ T+ ++++ DSE+ + AF FD D +GFI+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGFISAAELRHVMTNLG 114
Query: 524 ----KGSIDPLLEEADIDKDGRISLSEFRRLLRT 553
+D ++ EADID DG+++ EF ++ T
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTT 148
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 29/225 (12%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
D + T+G+ +G G FG Y K +GD VAVK + ++ P ++
Sbjct: 7 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKML-------------NVTAPTPQQLQA 50
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
K EV +L+ H N++ F + + I + CEG L L ++++
Sbjct: 51 FKNEVGVLRK-TRHVNILLFM-GYSTAPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLI 107
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQ 271
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 272 DIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 312
+ GS ++APEV+ K +SDV++ G++ Y L+ G+ P+
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 86/152 (56%), Gaps = 12/152 (7%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
L L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 358
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGLK 524
DG +DF EF+ T+ +++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 359 GDGTIDFPEFL--TMMARKMKYTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 413
Query: 525 G-----SIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 414 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 72.8 bits (177), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 89/153 (58%), Gaps = 12/153 (7%)
Query: 405 ALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC 464
A+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D
Sbjct: 3 AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDA 61
Query: 465 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL 523
+ +G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 62 DGNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNL 116
Query: 524 -----KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 117 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 149
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 141/364 (38%), Gaps = 110/364 (30%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y I L+G G +GY Y+A DK VA+KK+ + F+DL I + + R
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNR--------MFEDL-----IDCKRILR 76
Query: 158 EVKILQALAGHENVVKFYNAFEDDNY-----VYIAMELCEGGELLDRILAKKDSRYTEKD 212
E+ IL L + +++ ++ ++ +YI +E+ + + L K TE+
Sbjct: 77 EITILNRLKS-DYIIRLHDLIIPEDLLKFDELYIVLEIADSDL---KKLFKTPIFLTEQH 132
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK------- 265
++ +L H G++HRD+KP N L +D S+K DFGL+ I
Sbjct: 133 VKTILYNLLLGEKFIHESGIIHRDLKPANCLL---NQDCSVKICDFGLARTINSDKDIHI 189
Query: 266 ------------PG-------KKFQDIVGSAYYVAPE--VLKRKSGPESDVWSIGVITYI 304
PG K+ V + +Y APE +L+ D+WS G I
Sbjct: 190 VNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAE 249
Query: 305 LL----------CGRRPFW---------------------DKTEDGIFKEVLRNKP---- 329
LL R P + ++ + I V+ P
Sbjct: 250 LLNMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDL 309
Query: 330 ---------------------DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
D +K + SIS D ++ +L + + R+T +ALSHP
Sbjct: 310 KCITKQEVIKYIKLFPTRDGIDLSKK-YSSISKEGIDLLESMLRFNAQKRITIDKALSHP 368
Query: 369 WVRE 372
++++
Sbjct: 369 YLKD 372
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 114/297 (38%), Gaps = 44/297 (14%)
Query: 89 GYDKD-----FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQD 143
GYD F + + LGHG +G + K +G AVK+ + F+
Sbjct: 45 GYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR--------SMSPFRG 96
Query: 144 LKMILPIAVEDVKR---EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI 200
K D R EV + + H V+ A+E+ +Y+ ELC G L +
Sbjct: 97 PK--------DRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC--GPSLQQH 146
Query: 201 LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
+ E +R L A H GLVH D+KP N K DFGL
Sbjct: 147 CEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGP---RGRCKLGDFGL 203
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRR-----PFWDK 315
+ + G Y+APE+L+ G +DV+S+G+ + C W +
Sbjct: 204 LVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQ 263
Query: 316 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
G P+F +S+ + + +L DP+ R TA L+ P +R+
Sbjct: 264 LRQGYL------PPEFTA----GLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 29/225 (12%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
D + T+G+ +G G FG Y K +GD VAVK + ++ P ++
Sbjct: 27 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKML-------------NVTAPTPQQLQA 70
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
K EV +L+ H N++ F + + I + CEG L L ++++
Sbjct: 71 FKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLI 127
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQ 271
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 128 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFE 184
Query: 272 DIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 312
+ GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 185 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 29/225 (12%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
D + T+G+ +G G FG Y K +GD VAVK + ++ P ++
Sbjct: 35 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKML-------------NVTAPTPQQLQA 78
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
K EV +L+ H N++ F + + I + CEG L L ++++
Sbjct: 79 FKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLI 135
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQ 271
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 136 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFE 192
Query: 272 DIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 312
+ GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 143/336 (42%), Gaps = 68/336 (20%)
Query: 90 YDKDFDR--RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMI 147
+D FD Y I + +G+G +G A + G +VA+KKI VV+ + K
Sbjct: 46 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA---FDVVT--NAKRT 100
Query: 148 LPIAVEDVKREVKILQALAGHENVVKF---------YNAFEDDNYVYIAMELCEGGELLD 198
L RE+KIL+ H+N++ Y F+ VY+ ++L E L
Sbjct: 101 L--------RELKILKHFK-HDNIIAIKDILRPTVPYGEFKS---VYVVLDLMESD--LH 146
Query: 199 RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+I+ T + + Q+LR H ++HRD+KP N L E+ LK DF
Sbjct: 147 QII-HSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLL---VNENCELKIGDF 202
Query: 259 GLSDFI--KPGKK---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRP 311
G++ + P + + V + +Y APE++ + D+WS+G I +L R+
Sbjct: 203 GMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 262
Query: 312 FWDKT---------------EDGIFKEV--------LRNKPDFRRKPW----PSISNSAK 344
F K + + V +++ P + PW P A
Sbjct: 263 FPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQAL 322
Query: 345 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380
+ ++L +P AR++AA AL HP++ + D + P
Sbjct: 323 SLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEP 358
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + DG
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGDGT 354
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 526
+DF EF+ + ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 355 IDFPEFL--IMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 409
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 410 DEEVDEMIREADIDGDGQVNYEEFVQMM 437
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + DG
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGDGT 363
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 526
+DF EF+ T+ +++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 364 IDFPEFL--TMMARKMKYTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 143/336 (42%), Gaps = 68/336 (20%)
Query: 90 YDKDFDR--RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMI 147
+D FD Y I + +G+G +G A + G +VA+KKI VV+ + K
Sbjct: 47 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA---FDVVT--NAKRT 101
Query: 148 LPIAVEDVKREVKILQALAGHENVVKF---------YNAFEDDNYVYIAMELCEGGELLD 198
L RE+KIL+ H+N++ Y F+ VY+ ++L E L
Sbjct: 102 L--------RELKILKHFK-HDNIIAIKDILRPTVPYGEFKS---VYVVLDLMESD--LH 147
Query: 199 RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+I+ T + + Q+LR H ++HRD+KP N L E+ LK DF
Sbjct: 148 QIIHSSQP-LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLL---VNENCELKIGDF 203
Query: 259 GLSDFI--KPGKK---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRP 311
G++ + P + + V + +Y APE++ + D+WS+G I +L R+
Sbjct: 204 GMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 263
Query: 312 FWDKT---------------EDGIFKEV--------LRNKPDFRRKPW----PSISNSAK 344
F K + + V +++ P + PW P A
Sbjct: 264 FPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQAL 323
Query: 345 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380
+ ++L +P AR++AA AL HP++ + D + P
Sbjct: 324 SLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEP 359
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 29/225 (12%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
D + T+G+ +G G FG Y K +GD VAVK + ++ P ++
Sbjct: 7 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKML-------------NVTAPTPQQLQA 50
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
K EV +L+ H N++ F + + I + CEG L L ++++
Sbjct: 51 FKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLI 107
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQ 271
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFE 164
Query: 272 DIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 312
+ GS ++APEV+ K +SDV++ G++ Y L+ G+ P+
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 72.0 bits (175), Expect = 9e-13, Method: Composition-based stats.
Identities = 47/151 (31%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
+G +DF EF+ +L +++E DSE+ + AF+ FD D +G I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--SLMARKMKEQDSEEELIE---AFKVFDRDGNGLISAAELRHVMTNLGE 114
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG I+ EF R++
Sbjct: 115 KLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/151 (31%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
+G +DF EF+ +L +++E DSE+ + AF+ FD D +G I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--SLMARKMKEQDSEEELIE---AFKVFDRDGNGLISAAELRHVMTNLGE 114
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG I+ EF R++
Sbjct: 115 KLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 364
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 526
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 365 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 419
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 420 DEEVDEMIREADIDGDGQVNYEEFVQMM 447
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 363
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 526
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 364 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 363
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 526
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 364 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 88/154 (57%), Gaps = 12/154 (7%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 523
+G +DF EF+ T+ ++++ DSE+ + AF FD D +GFI+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGFISAAELRHVMTNLG 114
Query: 524 ----KGSIDPLLEEADIDKDGRISLSEFRRLLRT 553
+D ++ EADID DG+++ EF ++ +
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 148
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 124/290 (42%), Gaps = 37/290 (12%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
+LG G FG A + + A+KKI + + + L ++ +A + + V+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI----LSEVMLLASLNHQYVVRYY 68
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
A N VK A + + ++I ME CE L D I ++ ++ + + RQ+L
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQ-QRDEYWRLFRQILE 127
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------DFIK------PGK- 268
+ H G++HRD+KP N E ++K DFGL+ D +K PG
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 269 -KFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325
+G+A YVA EVL + D++S+G+I + ++ PF E + L
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKL 241
Query: 326 RN-----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
R+ PDF K ++ L+ DP R A L+ W+
Sbjct: 242 RSVSIEFPPDFDDNKM----KVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L DE++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
+G +DF EF+ L ++++ DSE+ + + AF FD D +GFI+ ELR + T L
Sbjct: 60 NGTIDFPEFL--NLMARKMKDTDSEE---KLKEAFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EAD+D DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 326
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 526
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 327 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 381
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 382 DEEVDEMIREADIDGDGQVNYEEFVQMM 409
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 120/295 (40%), Gaps = 46/295 (15%)
Query: 90 YDKDFDRRYT-IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLK 145
+ K+ D Y I +++G G+FG KA G + VA+K ++
Sbjct: 7 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGY------------ 54
Query: 146 MILPIAVEDVKREVKILQALAG---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA 202
E +RE ++ G H N+++ + V I E E G L D L
Sbjct: 55 ------TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL-DSFLR 107
Query: 203 KKDSRYTEKDAAVVVRQM---LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 259
D ++T ++R + +R AE VHRD+ N L S + K +DFG
Sbjct: 108 LNDGQFTVIQLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNS---NLVCKVSDFG 161
Query: 260 LSDFIKPGKK---FQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 311
LS F++ + +G + APE + RK SD WS G++ + ++ G RP
Sbjct: 162 LSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
Query: 312 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366
+WD + + + + D+R P P S + KD AR Q +S
Sbjct: 222 YWDMSNQDVINAI---EQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVS 273
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 71.2 bits (173), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
DG +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 DGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 71.2 bits (173), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 89/153 (58%), Gaps = 12/153 (7%)
Query: 405 ALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC 464
++A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D
Sbjct: 1 SMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDA 59
Query: 465 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL 523
+ +G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 DGNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNL 114
Query: 524 -----KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 115 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 147
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 88/152 (57%), Gaps = 12/152 (7%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 523
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 524 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 130/308 (42%), Gaps = 51/308 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G Y A D +G VA+K + RV + LPI+
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV-------RVPNGGGGGGGLPIST---V 59
Query: 157 REVKILQALAG--HENVVKFYNAFEDDNY-----VYIAMELCEGG--ELLDRILAKKDSR 207
REV +L+ L H NVV+ + V + E + LD+
Sbjct: 60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 119
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
T KD ++RQ LR H + +VHRD+KPEN L S ++K DFGL+
Sbjct: 120 ETIKD---LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQ 173
Query: 268 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IF 321
+V + +Y APEVL + + D+WS+G I + + R+P + + IF
Sbjct: 174 MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIF 232
Query: 322 KEV-LRNKPDFRR--------------KP----WPSISNSAKDFVKKLLVKDPRARLTAA 362
+ L + D+ R +P P + S + ++L +P R++A
Sbjct: 233 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF 292
Query: 363 QALSHPWV 370
+AL H ++
Sbjct: 293 RALQHSYL 300
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 88/152 (57%), Gaps = 12/152 (7%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 523
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 524 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 137/335 (40%), Gaps = 76/335 (22%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D DF++ LG G G + + K +G +A K I I P
Sbjct: 32 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPA 73
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
+ RE+++L +V FY AF D + I ME +GG LD++L KK R E
Sbjct: 74 IRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPE 130
Query: 211 ----KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 131 QILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID 184
Query: 267 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRP------------FW 313
VG+ Y++PE L+ +SD+WS+G+ + GR P F
Sbjct: 185 SMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG 243
Query: 314 DKTED---------------------------GIFK--EVLRNKPDFRRKPWPSISNSAK 344
+ E IF+ + + N+P + P S +
Sbjct: 244 CQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQ 302
Query: 345 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
DFV K L+K+P R Q + H +++ DA E+
Sbjct: 303 DFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 336
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 88/152 (57%), Gaps = 12/152 (7%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 523
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 524 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 115 EKLTDEEVDQMIREADIDGDGQVNYEEFVQMM 146
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 88/152 (57%), Gaps = 12/152 (7%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 523
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 524 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 88/152 (57%), Gaps = 12/152 (7%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 523
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 524 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 329
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 526
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 330 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 384
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 385 DEEVDEMIREADIDGDGQVNYEEFVQMM 412
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L DE++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
+G +DF EF+ L ++++ DSE+ + AF FD D +GFI+ ELR + T L
Sbjct: 60 NGTIDFPEFL--NLMARKMKDTDSEE---ELKEAFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EAD+D DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 329
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 526
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 330 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 384
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 385 DEEVDEMIREADIDGDGQVNYEEFVQMM 412
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 70.5 bits (171), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
+G +DF EF+ T+ ++++ DSE+ + AF FD D +GFI+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF ++
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVTMM 145
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 121/279 (43%), Gaps = 53/279 (18%)
Query: 118 KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177
K+N D++++K + D K L I + D+K E + E ++ Y+
Sbjct: 75 KSNNDKISIKS-----------KYDDFKNELQI-ITDIKNEYCL-----TCEGIITNYDE 117
Query: 178 FEDDNYVYIAMELCEGGELL--DRILAKKDSRYTEKDAAVVVRQMLR--VAAECHLHG-- 231
VYI E E +L D D YT V++ +++ + + ++H
Sbjct: 118 ------VYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK 171
Query: 232 -LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS- 289
+ HRD+KP N L ++ +K +DFG S+++ KK + G+ ++ PE +S
Sbjct: 172 NICHRDVKPSNIL---MDKNGRVKLSDFGESEYM-VDKKIKGSRGTYEFMPPEFFSNESS 227
Query: 290 --GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-------------PDFRRK 334
G + D+WS+G+ Y++ PF K +R K P +K
Sbjct: 228 YNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKK 287
Query: 335 PWPS---ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
S +SN DF+K L K+P R+T+ AL H W+
Sbjct: 288 STCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 137/335 (40%), Gaps = 76/335 (22%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D DF++ LG G G + + K +G +A K I I P
Sbjct: 5 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPA 46
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
+ RE+++L +V FY AF D + I ME +GG LD++L KK R E
Sbjct: 47 IRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPE 103
Query: 211 ----KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 104 QILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID 157
Query: 267 GKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP------------FW 313
VG+ Y++PE L+ +SD+WS+G+ + GR P F
Sbjct: 158 SMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG 216
Query: 314 DKTED---------------------------GIFK--EVLRNKPDFRRKPWPSISNSAK 344
+ E IF+ + + N+P + P S +
Sbjct: 217 CQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQ 275
Query: 345 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
DFV K L+K+P R Q + H +++ DA E+
Sbjct: 276 DFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 309
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 137/335 (40%), Gaps = 76/335 (22%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D DF++ LG G G + + K +G +A K I I P
Sbjct: 5 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPA 46
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
+ RE+++L +V FY AF D + I ME +GG LD++L KK R E
Sbjct: 47 IRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPE 103
Query: 211 ----KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 104 QILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID 157
Query: 267 GKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP------------FW 313
VG+ Y++PE L+ +SD+WS+G+ + GR P F
Sbjct: 158 SMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG 216
Query: 314 DKTED---------------------------GIFK--EVLRNKPDFRRKPWPSISNSAK 344
+ E IF+ + + N+P + P S +
Sbjct: 217 CQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQ 275
Query: 345 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
DFV K L+K+P R Q + H +++ DA E+
Sbjct: 276 DFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 309
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 70.5 bits (171), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 87/153 (56%), Gaps = 12/153 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
+G +DF EF+ T+ ++++ DSE+ + AF FD D +GFI+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEFRRLLRT 553
+D ++ EADID DG+++ EF ++ +
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 147
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 363
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 526
+DF EF+ T+ +++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 364 IDFPEFL--TMMARKMKYTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 49/249 (19%)
Query: 161 ILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGEL--LDRILAKKDSRYTEKDAAVV 216
IL+ L G N++K + +D + E + L +IL D R+
Sbjct: 85 ILENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRF-------Y 137
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+ ++L+ CH G++HRD+KP N + ++ L+ D+GL++F P +++ V S
Sbjct: 138 MYELLKALDYCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFYHPAQEYNVRVAS 195
Query: 277 AYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED---------------- 318
Y+ PE+L + D+WS+G + ++ R PF+ ++
Sbjct: 196 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEEL 255
Query: 319 -GIFKEV-LRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLVKDPRARLT 360
G K+ + P F RK W + +S A D + KLL D + RLT
Sbjct: 256 YGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLT 315
Query: 361 AAQALSHPW 369
A +A+ HP+
Sbjct: 316 AKEAMEHPY 324
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 137/335 (40%), Gaps = 76/335 (22%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D DF++ LG G G + + K +G +A K I I P
Sbjct: 5 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPA 46
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
+ RE+++L +V FY AF D + I ME +GG LD++L KK R E
Sbjct: 47 IRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPE 103
Query: 211 ----KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 104 QILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID 157
Query: 267 GKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP------------FW 313
VG+ Y++PE L+ +SD+WS+G+ + GR P F
Sbjct: 158 SMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG 216
Query: 314 DKTED---------------------------GIFK--EVLRNKPDFRRKPWPSISNSAK 344
+ E IF+ + + N+P + P S +
Sbjct: 217 CQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQ 275
Query: 345 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
DFV K L+K+P R Q + H +++ DA E+
Sbjct: 276 DFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 309
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 137/335 (40%), Gaps = 76/335 (22%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D DF++ LG G G + + K +G +A K I I P
Sbjct: 67 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPA 108
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
+ RE+++L +V FY AF D + I ME +GG LD++L KK R E
Sbjct: 109 IRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPE 165
Query: 211 ----KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 166 QILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI- 218
Query: 267 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRP------------FW 313
VG+ Y++PE L+ +SD+WS+G+ + GR P F
Sbjct: 219 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG 278
Query: 314 DKTED---------------------------GIFK--EVLRNKPDFRRKPWPSISNSAK 344
+ E IF+ + + N+P + P S +
Sbjct: 279 CQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP-PKLPSAVFSLEFQ 337
Query: 345 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
DFV K L+K+P R Q + H +++ DA E+
Sbjct: 338 DFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 371
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 70.5 bits (171), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 88/154 (57%), Gaps = 12/154 (7%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 523
+G +DF EF+ T+ ++++ DSE+ + AF FD D +GFI+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGFISAAELRHVMTNLG 114
Query: 524 ----KGSIDPLLEEADIDKDGRISLSEFRRLLRT 553
+D ++ E+DID DG+++ EF ++ +
Sbjct: 115 EKLTDEEVDEMIRESDIDGDGQVNYEEFVTMMTS 148
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 85/148 (57%), Gaps = 12/148 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 363
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGLKG--- 525
+DF EF+ T+ +++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 364 IDFPEFL--TMMARWMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 526 --SIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 49/249 (19%)
Query: 161 ILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGEL--LDRILAKKDSRYTEKDAAVV 216
IL+ L G N++K + +D + E + L +IL D R+
Sbjct: 90 ILENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRF-------Y 142
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+ ++L+ CH G++HRD+KP N + ++ L+ D+GL++F P +++ V S
Sbjct: 143 MYELLKALDYCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFYHPAQEYNVRVAS 200
Query: 277 AYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED---------------- 318
Y+ PE+L + D+WS+G + ++ R PF+ ++
Sbjct: 201 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEEL 260
Query: 319 -GIFKEV-LRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLVKDPRARLT 360
G K+ + P F RK W + +S A D + KLL D + RLT
Sbjct: 261 YGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLT 320
Query: 361 AAQALSHPW 369
A +A+ HP+
Sbjct: 321 AKEAMEHPY 329
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 24/199 (12%)
Query: 378 EIPIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLE 436
E+P + + NMR+F +L Q AL +AS L EE +L D F ID + +G + +
Sbjct: 24 ELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQ 83
Query: 437 EMRQALAK---------DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487
E+ +K DLP ES V IL A D + +G +D+SEFV + L
Sbjct: 84 ELIDGYSKLSGEEVAVFDLPQI--ESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLS 141
Query: 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL----KGSIDPLLEEADIDKDGRIS 543
D + ++AF+KFD D +G I+ +EL GL + ++ D + DG +
Sbjct: 142 KD------KLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVD 195
Query: 544 LSEFRRLLRTASISSRNVP 562
EF ++++ + S N P
Sbjct: 196 FEEFCKMIQK--LCSNNEP 212
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 121/298 (40%), Gaps = 60/298 (20%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
DK F + +L+G G FG + A + +G +K+++ N
Sbjct: 6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----------------- 48
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNY----------------VYIAMELCEGG 194
E +REVK L L H N+V + ++ +Y ++I ME C+ G
Sbjct: 49 --EKAEREVKALAKL-DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKG 105
Query: 195 ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254
L I ++ + + A + Q+ + H L++RD+KP N K+ +K
Sbjct: 106 TLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ---VK 162
Query: 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL--CG--- 308
DFGL +K K G+ Y++PE + + G E D++++G+I LL C
Sbjct: 163 IGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF 222
Query: 309 -RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365
F+ DGI ++ K K ++KLL K P R ++ L
Sbjct: 223 ETSKFFTDLRDGIISDIFDKKE--------------KTLLQKLLSKKPEDRPNTSEIL 266
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 87/152 (57%), Gaps = 12/152 (7%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
+A L D+++++ ++ F D D +G I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 523
+G +DF EF+ L ++++ DSE+ + AF FD D++GFI+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--NLMARKMKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLG 114
Query: 524 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EAD+D DG+I+ EF +++
Sbjct: 115 EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 60
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 61 NGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGE 115
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 116 XLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 115 XLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 137/335 (40%), Gaps = 76/335 (22%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D DF++ LG G G + + K +G +A K I I P
Sbjct: 5 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPA 46
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
+ RE+++L +V FY AF D + I ME +GG LD++L KK R E
Sbjct: 47 IRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPE 103
Query: 211 ----KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 104 QILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID 157
Query: 267 GKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP------------FW 313
VG+ Y++PE L+ +SD+WS+G+ + GR P F
Sbjct: 158 SMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG 216
Query: 314 DKTED---------------------------GIFK--EVLRNKPDFRRKPWPSISNSAK 344
+ E IF+ + + N+P + P S +
Sbjct: 217 CQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQ 275
Query: 345 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
DFV K L+K+P R Q + H +++ DA E+
Sbjct: 276 DFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 309
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 118/295 (40%), Gaps = 46/295 (15%)
Query: 90 YDKDFDRRYT-IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLK 145
+ K+ D Y I +++G G+FG KA G + VA+K ++
Sbjct: 9 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGY------------ 56
Query: 146 MILPIAVEDVKREVKILQALAG---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA 202
E +RE ++ G H N+++ + V I E E G L D L
Sbjct: 57 ------TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL-DSFLR 109
Query: 203 KKDSRYTEKDAAVVVRQM---LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 259
D ++T ++R + +R AE VHRD+ N L S + K +DFG
Sbjct: 110 LNDGQFTVIQLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNS---NLVCKVSDFG 163
Query: 260 LSDFIKPGKKFQDIVGS------AYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 311
LS F++ S + APE + RK SD WS G++ + ++ G RP
Sbjct: 164 LSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
Query: 312 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366
+WD + + + + D+R P P S + KD AR Q +S
Sbjct: 224 YWDMSNQDVINAI---EQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVS 275
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 70.1 bits (170), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 65
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 66 NGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGE 120
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 121 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 151
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 70.1 bits (170), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 69.7 bits (169), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 85/148 (57%), Gaps = 12/148 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L DE++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 59
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 523
+DF EF+ L ++++ DSE+ + AF FD D +GFI+ ELR + T L
Sbjct: 60 IDFPEFL--NLMARKMKDTDSEE---ELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLT 114
Query: 524 KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EAD+D DG+++ EF +++
Sbjct: 115 DEEVDEMIREADVDGDGQVNYEEFVQVM 142
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 125/306 (40%), Gaps = 71/306 (23%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-----EKNKILIRVVSFQDLKMILPIA 151
R + ++L G F + Y A D +G A+K++ EKN+ +I+ V F
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCF---------- 78
Query: 152 VEDVKREVKILQALAGHENVVKFYNAF-----EDDN---YVYIAMELCEGGELLDRILAK 203
++ L+GH N+V+F +A E D + ELC+G L L K
Sbjct: 79 ----------MKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQ--LVEFLKK 126
Query: 204 KDSRYTEKDAAVVVRQMLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATDFG 259
+SR V+ A H+H ++HRD+K EN L + ++K DFG
Sbjct: 127 MESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN---QGTIKLCDFG 183
Query: 260 LSDFIKPGKKFQDIVGSA----------------YYVAPEVLKRKS----GPESDVWSIG 299
+ I + D SA Y PE++ S G + D+W++G
Sbjct: 184 SATTIS---HYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALG 240
Query: 300 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 359
I Y+L + PF EDG ++ K + P + ++ +L +P RL
Sbjct: 241 CILYLLCFRQHPF----EDGAKLRIVNGK--YSIPPHDTQYTVFHSLIRAMLQVNPEERL 294
Query: 360 TAAQAL 365
+ A+ +
Sbjct: 295 SIAEVV 300
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 69.7 bits (169), Expect = 4e-12, Method: Composition-based stats.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 12/146 (8%)
Query: 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 467
S L +E++A+ +D F D + G I+ E+ L + L E+ + +++ + N +
Sbjct: 2 SELTEEQIAEFKDAFVQFDKEGTGKIATREL-GTLMRTLGQNPTEAELQDLIAEAENNNN 60
Query: 468 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK 524
G ++F+EF + Q+ E D+E+ + AF+ FD D DGFI+P ELR ++ G K
Sbjct: 61 GQLNFTEFCG--IMAKQMRETDTEE---EMREAFKIFDRDGDGFISPAELRFVMINLGEK 115
Query: 525 GS---IDPLLEEADIDKDGRISLSEF 547
+ ID ++ EAD D DG I+ EF
Sbjct: 116 VTDEEIDEMIREADFDGDGMINYEEF 141
Score = 35.8 bits (81), Expect = 0.062, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
D EE ++R+ F D D +G IS E+R + +L K+ + + E+++ D + DG++
Sbjct: 80 DTEE--EMREAFKIFDRDGDGFISPAELRFVMI-NLGEKVTDEEIDEMIREADFDGDGMI 136
Query: 471 DFSEFV 476
++ EFV
Sbjct: 137 NYEEFV 142
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 26/184 (14%)
Query: 383 ISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQAL 442
I VL N + + + ++ A+ +A +D ++ L+ F +D D G I+ E++++ L
Sbjct: 19 IHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGL 78
Query: 443 AKD---LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQA 499
KD LP+ +L ID + G +D++EF+AA L QL S+K
Sbjct: 79 EKDGLKLPYNFDL-----LLDQIDSDGSGKIDYTEFIAAALDRKQL----SKKL---IYC 126
Query: 500 AFEKFDIDRDGFITPEELR--MHTG-LKGSIDP--------LLEEADIDKDGRISLSEFR 548
AF FD+D DG IT EL ++ G KG+I ++ + D + DG+I EF
Sbjct: 127 AFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFS 186
Query: 549 RLLR 552
+++
Sbjct: 187 EMMK 190
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 28/266 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
++LG G FG + KA G A KK+ K ++ R + E KI
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRK------------GYQGAMVEKKI 238
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQ 219
L A +V AFE + + M + GG++ I + + + + E A Q
Sbjct: 239 L-AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAY 278
++ H +++RD+KPEN L +D +++ +D GL+ +K G+ K + G+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 279 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF---WDKTEDGIFKE-VLRNKPDFRR 333
++APE+L + S D +++GV Y ++ R PF +K E+ K+ VL +
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD 414
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K S ++KDF + LL KDP RL
Sbjct: 415 K----FSPASKDFCEALLQKDPEKRL 436
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 147 ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS 206
I P + RE+++L +V FY AF D + I ME +GG LD++L K+
Sbjct: 53 IKPAIRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KEAK 109
Query: 207 RYTEKDAAVVVRQMLRVAAEC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 265
R E+ V +LR A H ++HRD+KP N L S E +K DFG+S +
Sbjct: 110 RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI 166
Query: 266 PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF 312
VG+ Y+APE L+ +SD+WS+G+ L GR P
Sbjct: 167 DSMA-NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 28/266 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
++LG G FG + KA G A KK+ K ++ R + E KI
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRK------------GYQGAMVEKKI 238
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQ 219
L A +V AFE + + M + GG++ I + + + + E A Q
Sbjct: 239 L-AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAY 278
++ H +++RD+KPEN L +D +++ +D GL+ +K G+ K + G+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 279 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF---WDKTEDGIFKE-VLRNKPDFRR 333
++APE+L + S D +++GV Y ++ R PF +K E+ K+ VL +
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD 414
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K S ++KDF + LL KDP RL
Sbjct: 415 K----FSPASKDFCEALLQKDPEKRL 436
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 28/266 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
++LG G FG + KA G A KK+ K ++ R + E KI
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRK------------GYQGAMVEKKI 238
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQ 219
L A +V AFE + + M + GG++ I + + + + E A Q
Sbjct: 239 L-AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAY 278
++ H +++RD+KPEN L +D +++ +D GL+ +K G+ K + G+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 279 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF---WDKTEDGIFKE-VLRNKPDFRR 333
++APE+L + S D +++GV Y ++ R PF +K E+ K+ VL +
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD 414
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K S ++KDF + LL KDP RL
Sbjct: 415 K----FSPASKDFCEALLQKDPEKRL 436
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 28/266 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
++LG G FG + KA G A KK+ K ++ R + E KI
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRK------------GYQGAMVEKKI 238
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQ 219
L A +V AFE + + M + GG++ I + + + + E A Q
Sbjct: 239 L-AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAY 278
++ H +++RD+KPEN L +D +++ +D GL+ +K G+ K + G+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 279 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF---WDKTEDGIFKE-VLRNKPDFRR 333
++APE+L + S D +++GV Y ++ R PF +K E+ K+ VL +
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD 414
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARL 359
K S ++KDF + LL KDP RL
Sbjct: 415 K----FSPASKDFCEALLQKDPEKRL 436
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 118/280 (42%), Gaps = 33/280 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G K +G +AVK+I V ++ K +L ++ ++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRST------VDEKEQKQLL--------MDLDVVM 75
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVVVRQML 221
+ +V+FY A + +I MEL + + + D E+ + +
Sbjct: 76 RSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKIT--LA 133
Query: 222 RVAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 277
V A HL ++HRD+KP N L + ++K DFG+S + K +D G
Sbjct: 134 TVKALNHLKENLKIIHRDIKPSNILLDRS---GNIKLCDFGISGQLVDSIAKTRD-AGCR 189
Query: 278 YYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNKPD 330
Y+APE + + + SDVWS+G+ Y L GR P+ W+ D + + V + P
Sbjct: 190 PYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQ 249
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
S S +FV L KD R + L HP++
Sbjct: 250 LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 69.3 bits (168), Expect = 6e-12, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 59
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 523
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 114
Query: 524 KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 115 DEEVDEMIREADIDGDGQVNYEEFVQMM 142
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 69.3 bits (168), Expect = 6e-12, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 60
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 523
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 61 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 115
Query: 524 KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 116 DEEVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 123/316 (38%), Gaps = 73/316 (23%)
Query: 86 TDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLK 145
T + DK F + +L+G G FG + A + +G +++++ N
Sbjct: 2 TKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN------------ 49
Query: 146 MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY---------------------- 183
E +REVK L L H N+V + ++ +Y
Sbjct: 50 -------EKAEREVKALAKL-DHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNS 101
Query: 184 -------VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 236
++I ME C+ G L I ++ + + A + Q+ + H L+HRD
Sbjct: 102 SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRD 161
Query: 237 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDV 295
+KP N K+ +K DFGL +K K G+ Y++PE + + G E D+
Sbjct: 162 LKPSNIFLVDTKQ---VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDL 218
Query: 296 WSIGVITYILL--CG----RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 349
+++G+I LL C F+ DGI ++ K K ++K
Sbjct: 219 YALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKK--------------EKTLLQK 264
Query: 350 LLVKDPRARLTAAQAL 365
LL K P R ++ L
Sbjct: 265 LLSKKPEDRPNTSEIL 280
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 68.9 bits (167), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 91/153 (59%), Gaps = 12/153 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++ D ++ F D D +G I++EE+ + + L E + +++ +D +
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVI-RSLDQNPTEEELQDMISEVDADG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 523
+G ++F EF+ +L ++++ D+E+ + AF+ FD D++G+I+ ELR ++ G
Sbjct: 60 NGTIEFDEFL--SLMAKKVKDTDAEE---ELKEAFKVFDKDQNGYISASELRHVMINLGE 114
Query: 524 KGS---IDPLLEEADIDKDGRISLSEFRRLLRT 553
K + ++ +++EAD+D DG+++ EF +++ T
Sbjct: 115 KLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMT 147
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 68.9 bits (167), Expect = 7e-12, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 60
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 523
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 61 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 115
Query: 524 KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 116 DEEVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 68.9 bits (167), Expect = 7e-12, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 61
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 523
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 62 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 116
Query: 524 KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 117 DEEVDEMIREADIDGDGQVNYEEFVQMM 144
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 125/304 (41%), Gaps = 63/304 (20%)
Query: 38 NHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRR 97
+H A H QH + + KQH +S + T +P D R
Sbjct: 3 SHEAAAAQQHNSGTQHTVSGSQQEGQQRKQH---HSSKPTASMPRPHS-----DWQIPDR 54
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y I L+G G +G+ A DK VA+KKI +RV F+DL I + + R
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKI------LRV--FEDL-----IDCKRILR 101
Query: 158 EVKILQALAGHENVVKFYNA-----FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
E+ IL L H++VVK + E + +Y+ +E+ + + L + TE
Sbjct: 102 EIAILNRL-NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDF---KKLFRTPVYLTELH 157
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPG-- 267
++ +L H G++HRD+KP N L +D S+K DFGL+ D+ + G
Sbjct: 158 IKTLLYNLLVGVKYVHSAGILHRDLKPANCL---VNQDCSVKVCDFGLARTVDYPENGNS 214
Query: 268 -----------------------KKFQDIVGSAYYVAPE--VLKRKSGPESDVWSIGVIT 302
++ V + +Y APE +L+ DVWSIG I
Sbjct: 215 QLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIF 274
Query: 303 YILL 306
LL
Sbjct: 275 AELL 278
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+P+ S A +K++LV +P R+T + L+HP+ +E
Sbjct: 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 68.6 bits (166), Expect = 9e-12, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 87/152 (57%), Gaps = 12/152 (7%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
+A L ++++++ ++ F D D +G I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 523
+G +DF EF+ L ++++ DSE+ + AF FD D++GFI+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--NLMARKMKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLG 114
Query: 524 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EAD+D DG+I+ EF +++
Sbjct: 115 EKLTDEEVDEMIREADVDGDGQINYDEFVKVM 146
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 29/239 (12%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVS 140
P G+R Y + + +G G FG Y K +GD VAVK +++VV
Sbjct: 21 PRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVY--KGKWHGD-VAVK-------ILKVVD 70
Query: 141 FQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI 200
P + + EV +L+ H N++ F DN + I + CEG L
Sbjct: 71 ------PTPEQFQAFRNEVAVLRK-TRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKH- 121
Query: 201 LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
L +++++ + RQ + H ++HRDMK N E ++K DFGL
Sbjct: 122 LHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH---EGLTVKIGDFGL 178
Query: 261 SDFIKPGKKFQDI---VGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 312
+ Q + GS ++APEV++ + + P +SDV+S G++ Y L+ G P+
Sbjct: 179 ATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 68.6 bits (166), Expect = 9e-12, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EA+ID DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREANIDGDGQVNYEEFVQMM 145
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 85/146 (58%), Gaps = 12/146 (8%)
Query: 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 471
+E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G +D
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 472 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-----KG 525
F EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 63 FPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 117
Query: 526 SIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 118 EVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 67.8 bits (164), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 85/146 (58%), Gaps = 12/146 (8%)
Query: 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 471
+E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G +D
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 472 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-----KG 525
F EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 61 FPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 115
Query: 526 SIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 116 EVDEMIREADIDGDGQVNYEEFVQMM 141
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 21/182 (11%)
Query: 386 LNNMRQFVKYSRLKQFALRALASTLDD-EELADLRDQFDAIDVDKNGSISLEEMRQALAK 444
L NM++F +L Q A+ + S L EE +L F +D + +G + +E+ + K
Sbjct: 9 LGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRK 68
Query: 445 DLPWKLK----------ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 494
+ WK E+ V ILQ++D + +G +++SEFV + L +
Sbjct: 69 LMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRE----- 123
Query: 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDP----LLEEADIDKDGRISLSEFRRL 550
R AAF++FD D G IT EEL G+ D +L+E D + DG + EF +
Sbjct: 124 -RLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEM 182
Query: 551 LR 552
++
Sbjct: 183 MQ 184
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 39/228 (17%)
Query: 94 FDRRYTIGKL--LGHGQFG----YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMI 147
F +RY + K+ LG G FG Y Y T+ G+ VAVK +++
Sbjct: 6 FHKRY-LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG--------------C 50
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKD 205
P +RE++IL+ L HE++VK+ ED + V + ME G L D +
Sbjct: 51 GPQLRSGWQREIEILRTLY-HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----- 104
Query: 206 SRYTEKDAAVVV--RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
R+ A +++ +Q+ A H +HR + N L + D +K DFGL+
Sbjct: 105 PRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDN---DRLVKIGDFGLAKA 161
Query: 264 IKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 306
+ G ++ +D ++ APE LK K SDVWS GV Y LL
Sbjct: 162 VPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 132/308 (42%), Gaps = 54/308 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G Y A D +G VA+K + RV + ++ LPI+
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV-------RVPNGEE---GLPIST---V 51
Query: 157 REVKILQALAG--HENVVKFYNAFEDDNY-----VYIAMELCEGG--ELLDRILAKKDSR 207
REV +L+ L H NVV+ + V + E + LD+
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 111
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
T KD ++RQ LR H + +VHRD+KPEN L S ++K DFGL+
Sbjct: 112 ETIKD---LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQ 165
Query: 268 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IF 321
+V + +Y APEVL + + D+WS+G I + + R+P + + IF
Sbjct: 166 MALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIF 224
Query: 322 KEV-LRNKPDFRR--------------KP----WPSISNSAKDFVKKLLVKDPRARLTAA 362
+ L + D+ R +P P + S + ++L +P R++A
Sbjct: 225 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF 284
Query: 363 QALSHPWV 370
+AL H ++
Sbjct: 285 RALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 132/308 (42%), Gaps = 54/308 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G Y A D +G VA+K + RV + ++ LPI+
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV-------RVPNGEE---GLPIST---V 51
Query: 157 REVKILQALAG--HENVVKFYNAFEDDNY-----VYIAMELCEGG--ELLDRILAKKDSR 207
REV +L+ L H NVV+ + V + E + LD+
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 111
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
T KD ++RQ LR H + +VHRD+KPEN L S ++K DFGL+
Sbjct: 112 ETIKD---LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQ 165
Query: 268 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IF 321
+V + +Y APEVL + + D+WS+G I + + R+P + + IF
Sbjct: 166 MALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIF 224
Query: 322 KEV-LRNKPDFRR--------------KP----WPSISNSAKDFVKKLLVKDPRARLTAA 362
+ L + D+ R +P P + S + ++L +P R++A
Sbjct: 225 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF 284
Query: 363 QALSHPWV 370
+AL H ++
Sbjct: 285 RALQHSYL 292
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 144/354 (40%), Gaps = 66/354 (18%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVS 140
P G F + D RY + + LG G F ++A D N VA+K + +K+
Sbjct: 4 PGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAE 63
Query: 141 FQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLD 198
++K++ + D +E + G +++K + F + N V++ M GE L
Sbjct: 64 -DEIKLLQRVNDADNTKEDSM-----GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLL 117
Query: 199 RILAKKDSR-----YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
++ K + R Y ++ + ++ + + C G++H D+KPEN L + +L
Sbjct: 118 ALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENL 174
Query: 254 ---KATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGR 309
K D G + + + + + + + Y +PEV L G +D+WS + + L+ G
Sbjct: 175 IQIKIADLGNACWYD--EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232
Query: 310 RPF-------WDKTEDGIFK--EVLRNKPDF----------------------RRKPWP- 337
F + K +D I + E+L P + + K WP
Sbjct: 233 FLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPL 292
Query: 338 ------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ DF+ +L DPR R A ++HPW+++ EI
Sbjct: 293 EDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEI 346
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 39/228 (17%)
Query: 94 FDRRYTIGKL--LGHGQFG----YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMI 147
F +RY + K+ LG G FG Y Y T+ G+ VAVK +++
Sbjct: 5 FHKRY-LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG--------------C 49
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKD 205
P +RE++IL+ L HE++VK+ ED + V + ME G L D +
Sbjct: 50 GPQLRSGWQREIEILRTLY-HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----- 103
Query: 206 SRYTEKDAAVVV--RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
R+ A +++ +Q+ A H +HR + N L + D +K DFGL+
Sbjct: 104 PRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDN---DRLVKIGDFGLAKA 160
Query: 264 IKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 306
+ G ++ +D ++ APE LK K SDVWS GV Y LL
Sbjct: 161 VPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 23/221 (10%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ +++G G FG Y A GD VAVK + +D+ +E+V++E
Sbjct: 10 TLEEIIGIGGFGKVYRAF--WIGDEVAVKAARHDP-------DEDISQ----TIENVRQE 56
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA-KKDSRYTEKDAAVVV 217
K+ A+ H N++ + + + ME GG L +R+L+ K+ + AV +
Sbjct: 57 AKLF-AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQI 114
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL-----KATDFGLSDFIKPGKKFQD 272
+ + + + ++HRD+K N L E+ L K TDFGL+ K
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA 174
Query: 273 IVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPF 312
G+ ++APEV++ + SDVWS GV+ + LL G PF
Sbjct: 175 -AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 85/153 (55%), Gaps = 14/153 (9%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
+G +DF EF+ T+ ++++ + E + AF FD D +GFI+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDSEEE-----IREAFRVFDKDGNGFISAAELRHVMTNLGE 112
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEFRRLLRT 553
+D ++ EADID DG+++ EF ++ +
Sbjct: 113 KLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 145
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 102/249 (40%), Gaps = 58/249 (23%)
Query: 104 LGHGQFGYTYVATDK---ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVK 160
+G G F Y+AT + +++A+K + IR+ + E++
Sbjct: 29 IGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAA-----------------ELQ 71
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 220
L G +NV+ F +++V IAM E LD + + + ++ + +
Sbjct: 72 CLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL-----NSLSFQEVREYMLNL 126
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----KF------ 270
+ H G+VHRD+KP NFL+ + +L DFGL+ K KF
Sbjct: 127 FKALKRIHQFGIVHRDVKPSNFLYNRRLKKYAL--VDFGLAQGTHDTKIELLKFVQSEAQ 184
Query: 271 ----------------QDI---VGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR 309
Q + G+ + APEVL + + D+WS GVI LL GR
Sbjct: 185 QERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
Query: 310 RPFWDKTED 318
PF+ ++D
Sbjct: 245 YPFYKASDD 253
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 13/155 (8%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
+S L +E++A+ ++ F D D NGSIS E+ + + L E+ V +++ ID +
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVM-RSLGLSPSEAEVNDLMNEIDVDG 60
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 523
+ ++FSEF+A L QL+ +DSE+ L AF+ FD + DG I+ EL+ G
Sbjct: 61 NHQIEFSEFLA--LMSRQLKSNDSEQELLE---AFKVFDKNGDGLISAAELKHVLTSIGE 115
Query: 524 K---GSIDPLLEEADIDKDGRISLSEFRRLLRTAS 555
K +D +L E D G I++ +F LL S
Sbjct: 116 KLTDAEVDDMLREVS-DGSGEINIQQFAALLSKGS 149
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 144/354 (40%), Gaps = 66/354 (18%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVS 140
P G F + D RY + + LG G F ++A D N VA+K + +K+
Sbjct: 4 PGGFHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAE 63
Query: 141 FQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLD 198
++K++ + D +E + G +++K + F + N V++ M GE L
Sbjct: 64 -DEIKLLQRVNDADNTKEDSM-----GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLL 117
Query: 199 RILAKKDSR-----YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
++ K + R Y ++ + ++ + + C G++H D+KPEN L + +L
Sbjct: 118 ALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENL 174
Query: 254 ---KATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGR 309
K D G + + + + + + + Y +PEV L G +D+WS + + L+ G
Sbjct: 175 IQIKIADLGNACWYD--EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232
Query: 310 RPF-------WDKTEDGIFK--EVLRNKPDF----------------------RRKPWP- 337
F + K +D I + E+L P + + K WP
Sbjct: 233 FLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPL 292
Query: 338 ------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ DF+ +L DPR R A ++HPW+++ EI
Sbjct: 293 EDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEI 346
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 85/146 (58%), Gaps = 13/146 (8%)
Query: 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 471
+E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G +D
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 472 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-----KG 525
F EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 61 FPEFL--TMMARKMKDTDSEE----IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 114
Query: 526 SIDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EA+ID DG+++ EF +++
Sbjct: 115 EVDEMIREANIDGDGQVNYEEFVQMM 140
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 96/234 (41%), Gaps = 28/234 (11%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
I +++G G+FG K G R I+ K+ E +R+
Sbjct: 47 IERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGY---------------TEKQRRDF 91
Query: 160 KILQALAG---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
++ G H NVV V I +E E G L D L K D ++T +
Sbjct: 92 LCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGM 150
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIV 274
+R + G VHRD+ N L S + K +DFGLS I+ P +
Sbjct: 151 LRGIAAGMRYLADMGYVHRDLAARNILVNS---NLVCKVSDFGLSRVIEDDPEAVYTTTG 207
Query: 275 G--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
G + APE ++ RK SDVWS G++ + ++ G RP+WD + + K +
Sbjct: 208 GKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 261
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 37/249 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE--- 153
R +GK LG G FG +A + + + K + N++ V KM+ A E
Sbjct: 29 RLVLGKPLGEGAFGQVVLA------EAIGLDKDKPNRVTKVAV-----KMLKSDATEKDL 77
Query: 154 -DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------- 204
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSF 137
Query: 205 ------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ + + KD Q+ R +HRD+ N L ED+ +K DF
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADF 194
Query: 259 GLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFW 313
GL+ I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 195 GLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 254
Query: 314 DKTEDGIFK 322
+ +FK
Sbjct: 255 GVPVEELFK 263
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 132/308 (42%), Gaps = 54/308 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G Y A D +G VA+K + RV + ++ LPI+
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV-------RVPNGEE---GLPIST---V 51
Query: 157 REVKILQALAG--HENVVKFYNAFEDDNY-----VYIAMELCEGG--ELLDRILAKKDSR 207
REV +L+ L H NVV+ + V + E + LD+
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 111
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
T KD ++RQ LR H + +VHRD+KPEN L S ++K DFGL+
Sbjct: 112 ETIKD---LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQ 165
Query: 268 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IF 321
+V + +Y APEVL + + D+WS+G I + + R+P + + IF
Sbjct: 166 MALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIF 224
Query: 322 KEV-LRNKPDFRR--------------KP----WPSISNSAKDFVKKLLVKDPRARLTAA 362
+ L + D+ R +P P + S + ++L +P R++A
Sbjct: 225 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF 284
Query: 363 QALSHPWV 370
+AL H ++
Sbjct: 285 RALQHSYL 292
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 38/254 (14%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+F R + T+GK LG G FG +A + V + K +K K + V +KM+ A
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVA----VKMLKDDA 79
Query: 152 VE----DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--- 204
E D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 80 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 205 -----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
+ + T KD Q+ R +HRD+ N L E++ +
Sbjct: 140 MEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVM 196
Query: 254 KATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCG 308
K DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G
Sbjct: 197 KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 309 RRPFWDKTEDGIFK 322
P+ + +FK
Sbjct: 257 GSPYPGIPVEELFK 270
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 126/303 (41%), Gaps = 63/303 (20%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
+LG G FG A + + A+KKI + + L IL EV +L
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTE--------EKLSTILS--------EVXLL 56
Query: 163 QALAGHENVVKFYNAF-EDDNYV------------YIAMELCEGGELLDRILAKKDSRYT 209
+L H+ VV++Y A+ E N+V +I E CE L D I ++ ++
Sbjct: 57 ASL-NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQR 115
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------D 262
+ + + RQ+L + H G++HR++KP N E ++K DFGL+ D
Sbjct: 116 D-EYWRLFRQILEALSYIHSQGIIHRNLKPXNIFI---DESRNVKIGDFGLAKNVHRSLD 171
Query: 263 FIK------PGK--KFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPF 312
+K PG +G+A YVA EVL + D +S+G+I + + PF
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PF 228
Query: 313 WDKTEDGIFKEVLRN-----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
E + LR+ PDF K ++ L+ DP R A L+
Sbjct: 229 STGXERVNILKKLRSVSIEFPPDFDDNK----XKVEKKIIRLLIDHDPNKRPGARTLLNS 284
Query: 368 PWV 370
W+
Sbjct: 285 GWL 287
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVK 160
G++LG G FG T + G+ + +K+ LIR + +EVK
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKE------LIRFDEETQRTFL---------KEVK 59
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 220
+++ L H NV+KF D + E +GG L I+ DS+Y + +
Sbjct: 60 VMRCLE-HPNVLKFIGVLYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDI 117
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--------------KP 266
A H ++HRD+ N L +E+ ++ DFGL+ + KP
Sbjct: 118 ASGMAYLHSMNIIHRDLNSHNCL---VRENKNVVVADFGLARLMVDEKTQPEGLRSLKKP 174
Query: 267 G-KKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVI 301
KK +VG+ Y++APE++ +S E DV+S G++
Sbjct: 175 DRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIV 211
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 38/254 (14%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+F R + T+GK LG G FG +A + V + K +K K + V +KM+ A
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVA----VKMLKDDA 79
Query: 152 VE----DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--- 204
E D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 80 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 205 -----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
+ + T KD Q+ R +HRD+ N L E++ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVM 196
Query: 254 KATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCG 308
K DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G
Sbjct: 197 KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 309 RRPFWDKTEDGIFK 322
P+ + +FK
Sbjct: 257 GSPYPGIPVEELFK 270
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 28/235 (11%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
TI +++G G+FG K G R VA+K ++ V + + + D
Sbjct: 25 TIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLK--------VGYTEKQR------RDF 70
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
E I+ H N++ V I E E G L D L K D ++T
Sbjct: 71 LGEASIMGQF-DHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVG 128
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDI 273
++R + G VHRD+ N L S + K +DFGLS ++ P +
Sbjct: 129 MLRGISAGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTR 185
Query: 274 VG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
G + APE + RK SDVWS G++ + ++ G RP+W+ T + K V
Sbjct: 186 GGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAV 240
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 39/228 (17%)
Query: 94 FDRRYTIGKL--LGHGQFG----YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMI 147
F +RY + K+ LG G FG Y Y T+ G+ VAVK ++ +
Sbjct: 11 FHKRY-LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--------------C 55
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKD 205
P K+E+ IL+ L HE+++K+ ED + + + ME G L D +
Sbjct: 56 GPQHRSGWKQEIDILRTLY-HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----- 109
Query: 206 SRYTEKDAAVVV--RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
R++ A +++ +Q+ A H +HR++ N L + D +K DFGL+
Sbjct: 110 PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDN---DRLVKIGDFGLAKA 166
Query: 264 IKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 306
+ G ++ +D ++ APE LK K SDVWS GV Y LL
Sbjct: 167 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 33/219 (15%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIE-KNKILIRVVSFQDLKMILPIAVEDVKRE 158
+ +++G G FG V K VA+K+IE +++ +V + L +
Sbjct: 12 VEEVVGRGAFGV--VCKAKWRAKDVAIKQIESESERKAFIVELRQLSRV----------- 58
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRIL-AKKDSRYTEKDAAVVV 217
H N+VK Y A N V + ME EGG L + + A+ YT A
Sbjct: 59 --------NHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC 108
Query: 218 RQMLRVAAECH---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 274
Q + A H L+HRD+KP N L + + LK DFG + I+ +
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNK 164
Query: 275 GSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPF 312
GSA ++APEV + + E DV+S G+I + ++ R+PF
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 33/219 (15%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIE-KNKILIRVVSFQDLKMILPIAVEDVKRE 158
+ +++G G FG V K VA+K+IE +++ +V + L +
Sbjct: 13 VEEVVGRGAFGV--VCKAKWRAKDVAIKQIESESERKAFIVELRQLSRV----------- 59
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRIL-AKKDSRYTEKDAAVVV 217
H N+VK Y A N V + ME EGG L + + A+ YT A
Sbjct: 60 --------NHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC 109
Query: 218 RQMLRVAAECH---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 274
Q + A H L+HRD+KP N L + + LK DFG + I+ +
Sbjct: 110 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNK 165
Query: 275 GSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPF 312
GSA ++APEV + + E DV+S G+I + ++ R+PF
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 39/250 (15%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
I +++G G+FG K G R VA+K ++ E +
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY------------------TEKQR 78
Query: 157 REVKILQALAG---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
R+ ++ G H NV+ V I E E G L D L + D ++T
Sbjct: 79 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQL 137
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK---PGKKF 270
++R + VHRD+ N L S + K +DFGLS F++ +
Sbjct: 138 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNS---NLVCKVSDFGLSRFLEDDTSDPTY 194
Query: 271 QDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVL 325
+G + APE ++ RK SDVWS G++ + ++ G RP+WD T + +
Sbjct: 195 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI- 253
Query: 326 RNKPDFRRKP 335
+ D+R P
Sbjct: 254 --EQDYRLPP 261
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 38/254 (14%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+F R + T+GK LG G FG +A + V + K +K K + V +KM+ A
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVA----VKMLKDDA 79
Query: 152 VE----DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--- 204
E D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 80 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 205 -----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
+ + T KD Q+ R +HRD+ N L E++ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVM 196
Query: 254 KATDFGLSDFIKPGKKFQDIVGS---AYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCG 308
K DFGL+ I +++ ++APE L R +SDVWS GV+ + I G
Sbjct: 197 KIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 309 RRPFWDKTEDGIFK 322
P+ + +FK
Sbjct: 257 GSPYPGIPVEELFK 270
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 39/228 (17%)
Query: 94 FDRRYTIGKL--LGHGQFG----YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMI 147
F +RY + K+ LG G FG Y Y T+ G+ VAVK ++ +
Sbjct: 11 FHKRY-LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--------------C 55
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKD 205
P K+E+ IL+ L HE+++K+ ED + + + ME G L D +
Sbjct: 56 GPQHRSGWKQEIDILRTLY-HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----- 109
Query: 206 SRYTEKDAAVVV--RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
R++ A +++ +Q+ A H +HR++ N L + D +K DFGL+
Sbjct: 110 PRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDN---DRLVKIGDFGLAKA 166
Query: 264 IKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 306
+ G ++ +D ++ APE LK K SDVWS GV Y LL
Sbjct: 167 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 37/249 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE--- 153
R +GK LG G FG +A + + + K + N++ V KM+ A E
Sbjct: 18 RLVLGKPLGEGAFGQVVLA------EAIGLDKDKPNRVTKVAV-----KMLKSDATEKDL 66
Query: 154 -DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------- 204
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 67 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 126
Query: 205 ------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ + + KD Q+ R +HRD+ N L ED+ +K DF
Sbjct: 127 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADF 183
Query: 259 GLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFW 313
GL+ I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 184 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 243
Query: 314 DKTEDGIFK 322
+ +FK
Sbjct: 244 GVPVEELFK 252
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 105/254 (41%), Gaps = 39/254 (15%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKD-----------FDRRYTIGKLLGHGQFGYTYVATDKAN 120
N++++ G+ G + GYD D RY + K++G G FG A D
Sbjct: 64 NAKKRQGMT--GGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKV 121
Query: 121 GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE-----NVVKFY 175
VA+K + K R + E++IL+ L + NV+
Sbjct: 122 HQHVALKMVRNEKRFHRQAA----------------EEIRILEHLRKQDKDNTMNVIHML 165
Query: 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 235
F N++ + EL L + I K ++ +L+ H + ++H
Sbjct: 166 ENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHC 224
Query: 236 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESD 294
D+KPEN L K + S +K DFG S + ++ + S +Y APEV L + G D
Sbjct: 225 DLKPENILLKQ-QGRSGIKVIDFGSSCYEH--QRVYTXIQSRFYRAPEVILGARYGMPID 281
Query: 295 VWSIGVITYILLCG 308
+WS+G I LL G
Sbjct: 282 MWSLGCILAELLTG 295
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 345 DFVKKLLVKDPRARLTAAQALSHPWVR 371
DF+K+ L DP R+T QAL HPW+R
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 37/249 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE--- 153
R +GK LG G FG +A + + + K + N++ V KM+ A E
Sbjct: 14 RLVLGKPLGEGAFGQVVLA------EAIGLDKDKPNRVTKVAV-----KMLKSDATEKDL 62
Query: 154 -DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------- 204
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 63 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCY 122
Query: 205 ------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ + + KD Q+ R +HRD+ N L ED+ +K DF
Sbjct: 123 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADF 179
Query: 259 GLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFW 313
GL+ I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 180 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 239
Query: 314 DKTEDGIFK 322
+ +FK
Sbjct: 240 GVPVEELFK 248
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 37/249 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE--- 153
R +GK LG G FG +A + + + K + N++ V KM+ A E
Sbjct: 21 RLVLGKPLGEGAFGQVVLA------EAIGLDKDKPNRVTKVAV-----KMLKSDATEKDL 69
Query: 154 -DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------- 204
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 70 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 129
Query: 205 ------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ + + KD Q+ R +HRD+ N L ED+ +K DF
Sbjct: 130 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADF 186
Query: 259 GLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFW 313
GL+ I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 187 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 246
Query: 314 DKTEDGIFK 322
+ +FK
Sbjct: 247 GVPVEELFK 255
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 104/254 (40%), Gaps = 39/254 (15%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKD-----------FDRRYTIGKLLGHGQFGYTYVATDKAN 120
N++++ G+ G + GYD D RY + K++G G FG A D
Sbjct: 64 NAKKRQGMT--GGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKV 121
Query: 121 GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE-----NVVKFY 175
VA+K + K R E++IL+ L + NV+
Sbjct: 122 HQHVALKMVRNEKRFHR----------------QAAEEIRILEHLRKQDKDNTMNVIHML 165
Query: 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 235
F N++ + EL L + I K ++ +L+ H + ++H
Sbjct: 166 ENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHC 224
Query: 236 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESD 294
D+KPEN L K + S +K DFG S + ++ + S +Y APEV L + G D
Sbjct: 225 DLKPENILLKQ-QGRSGIKVIDFGSSCY--EHQRVYTXIQSRFYRAPEVILGARYGMPID 281
Query: 295 VWSIGVITYILLCG 308
+WS+G I LL G
Sbjct: 282 MWSLGCILAELLTG 295
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 345 DFVKKLLVKDPRARLTAAQALSHPWVR 371
DF+K+ L DP R+T QAL HPW+R
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 37/249 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE--- 153
R +GK LG G FG +A + + + K + N++ V KM+ A E
Sbjct: 29 RLVLGKPLGEGAFGQVVLA------EAIGLDKDKPNRVTKVAV-----KMLKSDATEKDL 77
Query: 154 -DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------- 204
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 137
Query: 205 ------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ + + KD Q+ R +HRD+ N L ED+ +K DF
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADF 194
Query: 259 GLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFW 313
GL+ I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 195 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 254
Query: 314 DKTEDGIFK 322
+ +FK
Sbjct: 255 GVPVEELFK 263
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 30/226 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y +G+ +G G FG + T+ N +VA+K F+ + P + D R
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIK-------------FEPRRSDAP-QLRDEYR 57
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
K+L G NV F ++ + + ++L G L+ +L +++ K A+
Sbjct: 58 TYKLLAGCTGIPNVYYF---GQEGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAA 112
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLSDFIK--------PG 267
+QML H LV+RD+KP+NFL ++K + + DFG+ F + P
Sbjct: 113 KQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPY 172
Query: 268 KKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF 312
++ +++ G+A Y++ L R+ D+ ++G + L G P+
Sbjct: 173 REKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 218
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 105/254 (41%), Gaps = 39/254 (15%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKD-----------FDRRYTIGKLLGHGQFGYTYVATDKAN 120
N++++ G+ G + GYD D RY + K++G G FG A D
Sbjct: 64 NAKKRQGMT--GGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKV 121
Query: 121 GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE-----NVVKFY 175
VA+K + K R + E++IL+ L + NV+
Sbjct: 122 HQHVALKMVRNEKRFHRQAA----------------EEIRILEHLRKQDKDNTMNVIHML 165
Query: 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 235
F N++ + EL L + I K ++ +L+ H + ++H
Sbjct: 166 ENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHC 224
Query: 236 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESD 294
D+KPEN L K + S +K DFG S + ++ + S +Y APEV L + G D
Sbjct: 225 DLKPENILLKQ-QGRSGIKVIDFGSSCYEH--QRVYXXIQSRFYRAPEVILGARYGMPID 281
Query: 295 VWSIGVITYILLCG 308
+WS+G I LL G
Sbjct: 282 MWSLGCILAELLTG 295
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 345 DFVKKLLVKDPRARLTAAQALSHPWVR 371
DF+K+ L DP R+T QAL HPW+R
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 37/249 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE--- 153
R +GK LG G FG +A + + + K + N++ V KM+ A E
Sbjct: 22 RLVLGKPLGEGAFGQVVLA------EAIGLDKDKPNRVTKVAV-----KMLKSDATEKDL 70
Query: 154 -DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------- 204
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 71 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 130
Query: 205 ------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ + + KD Q+ R +HRD+ N L ED+ +K DF
Sbjct: 131 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADF 187
Query: 259 GLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFW 313
GL+ I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 188 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 247
Query: 314 DKTEDGIFK 322
+ +FK
Sbjct: 248 GVPVEELFK 256
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 30/226 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y +G+ +G G FG + T+ N +VA+K F+ + P + D R
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIK-------------FEPRRSDAP-QLRDEYR 56
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
K+L G NV F ++ + + ++L G L+ +L +++ K A+
Sbjct: 57 TYKLLAGCTGIPNVYYF---GQEGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAA 111
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLSDFIK--------PG 267
+QML H LV+RD+KP+NFL ++K + + DFG+ F + P
Sbjct: 112 KQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPY 171
Query: 268 KKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF 312
++ +++ G+A Y++ L R+ D+ ++G + L G P+
Sbjct: 172 REKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 217
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 38/254 (14%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+F R + T+GK LG G FG +A + V + K +K K + V +KM+ A
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVA----VKMLKDDA 79
Query: 152 VE----DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--- 204
E D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 80 TEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 205 -----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
+ + T KD Q+ R +HRD+ N L E++ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVM 196
Query: 254 KATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCG 308
K DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 309 RRPFWDKTEDGIFK 322
P+ + +FK
Sbjct: 257 GSPYPGIPVEELFK 270
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 37/249 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE--- 153
R +GK LG G FG +A + + + K + N++ V KM+ A E
Sbjct: 29 RLVLGKPLGEGAFGQVVLA------EAIGLDKDKPNRVTKVAV-----KMLKSDATEKDL 77
Query: 154 -DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------- 204
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCY 137
Query: 205 ------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ + + KD Q+ R +HRD+ N L ED+ +K DF
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADF 194
Query: 259 GLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFW 313
GL+ I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 195 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 254
Query: 314 DKTEDGIFK 322
+ +FK
Sbjct: 255 GVPVEELFK 263
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 381 IDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQ 440
IDI VL N + + R ++ A+ +A +D ++ L+ F +D + G+I+ ++R+
Sbjct: 20 IDIHVLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRK 79
Query: 441 ALAKD---LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 497
L + LP +L ID + G +D++EF+AA + QL S+K
Sbjct: 80 GLERSGLMLPPNFDL-----LLDQIDSDGSGNIDYTEFLAAAIDRRQL----SKKL---I 127
Query: 498 QAAFEKFDIDRDGFITPEELRMHTGLKGS------------IDPLLEEADIDKDGRISLS 545
AF FD+D DG IT EL H G+ + ++ E D + DG+I
Sbjct: 128 YCAFRVFDVDNDGEITTAEL-AHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFY 186
Query: 546 EFRRLLR 552
EF +++
Sbjct: 187 EFSEMMK 193
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 38/254 (14%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+F R + T+GK LG G FG +A + V + K +K K + V +KM+ A
Sbjct: 77 EFPRDKLTLGKPLGEGCFGQVVMA------EAVGIDK-DKPKEAVTVA----VKMLKDDA 125
Query: 152 VE----DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--- 204
E D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 126 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 185
Query: 205 -----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
+ + T KD Q+ R +HRD+ N L E++ +
Sbjct: 186 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVM 242
Query: 254 KATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCG 308
K DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G
Sbjct: 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 302
Query: 309 RRPFWDKTEDGIFK 322
P+ + +FK
Sbjct: 303 GSPYPGIPVEELFK 316
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 37/249 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE--- 153
R +GK LG G FG +A + + + K + N++ V KM+ A E
Sbjct: 29 RLVLGKPLGEGAFGQVVLA------EAIGLDKDKPNRVTKVAV-----KMLKSDATEKDL 77
Query: 154 -DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------- 204
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSY 137
Query: 205 ------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ + + KD Q+ R +HRD+ N L ED+ +K DF
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADF 194
Query: 259 GLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFW 313
GL+ I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 195 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 254
Query: 314 DKTEDGIFK 322
+ +FK
Sbjct: 255 GVPVEELFK 263
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 37/249 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE--- 153
R +GK LG G FG +A + + + K + N++ V KM+ A E
Sbjct: 70 RLVLGKPLGEGAFGQVVLA------EAIGLDKDKPNRVTKVAV-----KMLKSDATEKDL 118
Query: 154 -DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------- 204
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 119 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 178
Query: 205 ------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ + + KD Q+ R +HRD+ N L ED+ +K DF
Sbjct: 179 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADF 235
Query: 259 GLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFW 313
GL+ I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 236 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 295
Query: 314 DKTEDGIFK 322
+ +FK
Sbjct: 296 GVPVEELFK 304
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 63.9 bits (154), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
+S L +E++A+ ++ F D D NGSIS E+ + + L E+ V +++ ID +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVM-RSLGLSPSEAEVNDLMNEIDVDG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 523
+ ++FSEF+A L QL+ +DSE+ L AF+ FD + DG I+ EL+ G
Sbjct: 60 NHQIEFSEFLA--LMSRQLKSNDSEQELLE---AFKVFDKNGDGLISAAELKHVLTSIGE 114
Query: 524 K---GSIDPLLEEADIDKDGRISLSEFRRLL 551
K +D +L E D G I++ +F LL
Sbjct: 115 KLTDAEVDDMLREVS-DGSGEINIQQFAALL 144
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 21/167 (12%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
+ S D +E+ L +F +D+D +GS+S+EE LP + V ++ D +
Sbjct: 11 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTD 65
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHT 521
+G VDF EF+ V Q ++ LR AF +D+D+DG+I+ E L+M
Sbjct: 66 GNGEVDFKEFIEG---VSQFSVKGDKEQKLR--FAFRIYDMDKDGYISNGELFQVLKMMV 120
Query: 522 G-------LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 561
G L+ +D + AD D DGRIS EF ++ I + V
Sbjct: 121 GNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 167
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 21/167 (12%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
+ S D +E+ L +F +D+D +GS+S+EE LP + V ++ D +
Sbjct: 10 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTD 64
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHT 521
+G VDF EF+ V Q ++ LR AF +D+D+DG+I+ E L+M
Sbjct: 65 GNGEVDFKEFIEG---VSQFSVKGDKEQKLR--FAFRIYDMDKDGYISNGELFQVLKMMV 119
Query: 522 G-------LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 561
G L+ +D + AD D DGRIS EF ++ I + V
Sbjct: 120 GNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 166
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 38/254 (14%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+F R + T+GK LG G FG +A + V + K +K K + V +KM+ A
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVA----VKMLKDDA 79
Query: 152 VE----DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--- 204
E D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 80 TEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 205 -----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
+ + T KD Q+ R +HRD+ N L E++ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVM 196
Query: 254 KATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCG 308
K DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 309 RRPFWDKTEDGIFK 322
P+ + +FK
Sbjct: 257 GSPYPGIPVEELFK 270
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 38/254 (14%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+F R + T+GK LG G FG +A + V + K +K K + V +KM+ A
Sbjct: 18 EFPRDKLTLGKPLGEGCFGQVVMA------EAVGIDK-DKPKEAVTVA----VKMLKDDA 66
Query: 152 VE----DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--- 204
E D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 67 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 126
Query: 205 -----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
+ + T KD Q+ R +HRD+ N L E++ +
Sbjct: 127 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVL---VTENNVM 183
Query: 254 KATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCG 308
K DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G
Sbjct: 184 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 243
Query: 309 RRPFWDKTEDGIFK 322
P+ + +FK
Sbjct: 244 GSPYPGIPVEELFK 257
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 38/254 (14%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+F R + T+GK LG G FG +A + V + K +K K + V +KM+ A
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVA----VKMLKDDA 79
Query: 152 VE----DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--- 204
E D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 80 TEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 205 -----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
+ + T KD Q+ R +HRD+ N L E++ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVM 196
Query: 254 KATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCG 308
K DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 309 RRPFWDKTEDGIFK 322
P+ + +FK
Sbjct: 257 GSPYPGIPVEELFK 270
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVAPE 283
G VHRD+ N L S + K +DFGLS ++ P + G + +PE
Sbjct: 164 SDMGFVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 284 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 38/254 (14%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+F R + T+GK LG G FG +A + V + K +K K + V +KM+ A
Sbjct: 20 EFPRDKLTLGKPLGEGCFGQVVMA------EAVGIDK-DKPKEAVTVA----VKMLKDDA 68
Query: 152 VE----DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--- 204
E D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 69 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 128
Query: 205 -----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
+ + T KD Q+ R +HRD+ N L E++ +
Sbjct: 129 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVM 185
Query: 254 KATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCG 308
K DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G
Sbjct: 186 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 245
Query: 309 RRPFWDKTEDGIFK 322
P+ + +FK
Sbjct: 246 GSPYPGIPVEELFK 259
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 94 FDRRYTIGKL--LGHGQFG----YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMI 147
F +RY + K+ LG G FG Y Y T+ G+ VAVK ++ +
Sbjct: 28 FHKRY-LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG------------- 73
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKKD 205
P K+E+ IL+ L HE+++K+ ED + + ME G L D +
Sbjct: 74 -PQHRSGWKQEIDILRTLY-HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL----- 126
Query: 206 SRYTEKDAAVVV--RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
R++ A +++ +Q+ A H +HRD+ N L + D +K DFGL+
Sbjct: 127 PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDN---DRLVKIGDFGLAKA 183
Query: 264 IKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 306
+ G + +D ++ APE LK K SDVWS GV Y LL
Sbjct: 184 VPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 38/254 (14%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+F R + T+GK LG G FG +A + V + K +K K + V +KM+ A
Sbjct: 23 EFPRDKLTLGKPLGEGCFGQVVMA------EAVGIDK-DKPKEAVTVA----VKMLKDDA 71
Query: 152 VE----DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--- 204
E D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 72 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 131
Query: 205 -----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
+ + T KD Q+ R +HRD+ N L E++ +
Sbjct: 132 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVM 188
Query: 254 KATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCG 308
K DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G
Sbjct: 189 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 248
Query: 309 RRPFWDKTEDGIFK 322
P+ + +FK
Sbjct: 249 GSPYPGIPVEELFK 262
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 37/229 (16%)
Query: 93 DFDRR--YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
+FD R G +G G FG Y N VAVKK L ++ I
Sbjct: 26 NFDERPISVGGNKMGEGGFGVVY--KGYVNNTTVAVKK---------------LAAMVDI 68
Query: 151 AVEDVKR----EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS 206
E++K+ E+K++ A HEN+V+ D + + + G LLDR+ +
Sbjct: 69 TTEELKQQFDQEIKVM-AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 207 RYTEKDAAVVVRQMLRVAAE-CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 265
+ Q H + +HRD+K N L A + K +DFGL+ +
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA---FTAKISDFGLA---R 181
Query: 266 PGKKFQD------IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 308
+KF IVG+ Y+APE L+ + P+SD++S GV+ ++ G
Sbjct: 182 ASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY--------- 278
G VHRD+ N L S + K +DFGL G+ +D +AY
Sbjct: 164 SDMGYVHRDLAARNILINS---NLVCKVSDFGL------GRVLEDDPEAAYTTRGGKIPI 214
Query: 279 -YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ +PE + RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 37/229 (16%)
Query: 93 DFDRR--YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
+FD R G +G G FG Y N VAVKK L ++ I
Sbjct: 26 NFDERPISVGGNKMGEGGFGVVY--KGYVNNTTVAVKK---------------LAAMVDI 68
Query: 151 AVEDVKR----EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS 206
E++K+ E+K++ A HEN+V+ D + + + G LLDR+ +
Sbjct: 69 TTEELKQQFDQEIKVM-AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 207 RYTEKDAAVVVRQMLRVAAE-CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 265
+ Q H + +HRD+K N L A + K +DFGL+ +
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA---FTAKISDFGLA---R 181
Query: 266 PGKKFQD------IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 308
+KF IVG+ Y+APE L+ + P+SD++S GV+ ++ G
Sbjct: 182 ASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR---VVSFQDLKMILPIAVED 154
+++ +++G G FG Y G A+K ++K +I ++ ++ + M+ ++ D
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
+V AF + + ++L GG+L + + ++E D
Sbjct: 250 CP-------------FIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMR 294
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI 273
+++ H +V+RD+KP N L E ++ +D GL+ DF K KK
Sbjct: 295 FYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKPHAS 349
Query: 274 VGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF 312
VG+ Y+APEVL++ +S D +S+G + + LL G PF
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR---VVSFQDLKMILPIAVED 154
+++ +++G G FG Y G A+K ++K +I ++ ++ + M+ ++ D
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
+V AF + + ++L GG+L + + ++E D
Sbjct: 251 CP-------------FIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMR 295
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI 273
+++ H +V+RD+KP N L E ++ +D GL+ DF K KK
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKPHAS 350
Query: 274 VGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF 312
VG+ Y+APEVL++ +S D +S+G + + LL G PF
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 37/229 (16%)
Query: 93 DFDRR--YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
+FD R G +G G FG Y N VAVKK L ++ I
Sbjct: 20 NFDERPISVGGNKMGEGGFGVVY--KGYVNNTTVAVKK---------------LAAMVDI 62
Query: 151 AVEDVKR----EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS 206
E++K+ E+K++ A HEN+V+ D + + + G LLDR+ +
Sbjct: 63 TTEELKQQFDQEIKVM-AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 121
Query: 207 RYTEKDAAVVVRQMLRVAAE-CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 265
+ Q H + +HRD+K N L A + K +DFGL+ +
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA---FTAKISDFGLA---R 175
Query: 266 PGKKFQD------IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 308
+KF IVG+ Y+APE L+ + P+SD++S GV+ ++ G
Sbjct: 176 ASEKFAQXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 151
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVAPE 283
G VHRD+ N L S + K +DFGLS ++ P + G + +PE
Sbjct: 152 SDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 208
Query: 284 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 209 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 251
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 38/254 (14%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+F R + T+GK LG G FG +A + V + K +K K + V +KM+ A
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVA----VKMLKDDA 79
Query: 152 VE----DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--- 204
E D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 80 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 205 -----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
+ + T KD Q+ R +HRD+ N L E++ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVM 196
Query: 254 KATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCG 308
+ DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G
Sbjct: 197 RIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 309 RRPFWDKTEDGIFK 322
P+ + +FK
Sbjct: 257 GSPYPGIPVEELFK 270
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVAPE 283
G VHRD+ N L S + K +DFGLS ++ P + G + +PE
Sbjct: 164 SDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 284 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVAPE 283
G VHRD+ N L S + K +DFGLS ++ P + G + +PE
Sbjct: 135 SDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 284 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVAPE 283
G VHRD+ N L S + K +DFGLS ++ P + G + +PE
Sbjct: 135 SDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 284 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVAPE 283
G VHRD+ N L S + K +DFGLS ++ P + G + +PE
Sbjct: 164 SDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 284 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVAPE 283
G VHRD+ N L S + K +DFGLS ++ P + G + +PE
Sbjct: 164 SDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 284 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR---VVSFQDLKMILPIAVED 154
+++ +++G G FG Y G A+K ++K +I ++ ++ + M+ ++ D
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
+V AF + + ++L GG+L + + ++E D
Sbjct: 251 CP-------------FIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMR 295
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI 273
+++ H +V+RD+KP N L E ++ +D GL+ DF K KK
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKPHAS 350
Query: 274 VGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF 312
VG+ Y+APEVL++ +S D +S+G + + LL G PF
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR---VVSFQDLKMILPIAVED 154
+++ +++G G FG Y G A+K ++K +I ++ ++ + M+ ++ D
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
+V AF + + ++L GG+L + + ++E D
Sbjct: 251 CP-------------FIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMR 295
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI 273
+++ H +V+RD+KP N L E ++ +D GL+ DF K KK
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKPHAS 350
Query: 274 VGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF 312
VG+ Y+APEVL++ +S D +S+G + + LL G PF
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVAPE 283
G VHRD+ N L S + K +DFGLS ++ P + G + +PE
Sbjct: 164 SDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 284 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVAPE 283
G VHRD+ N L S + K +DFGLS ++ P + G + +PE
Sbjct: 164 SDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 284 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 161
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVAPE 283
G VHRD+ N L S + K +DFGLS ++ P + G + +PE
Sbjct: 162 SDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 218
Query: 284 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 219 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 261
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVAPE 283
G VHRD+ N L S + K +DFGLS ++ P + G + +PE
Sbjct: 164 SDMGAVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 284 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 100/250 (40%), Gaps = 39/250 (15%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
I +++G G+FG K G R VA+K ++ E +
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY------------------TEKQR 52
Query: 157 REVKILQALAG---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
R+ ++ G H NV+ V I E E G L D L + D ++T
Sbjct: 53 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQL 111
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK---PGKKF 270
++R + VHR + N L S + K +DFGLS F++ +
Sbjct: 112 VGMLRGIAAGMKYLADMNYVHRALAARNILVNS---NLVCKVSDFGLSRFLEDDTSDPTY 168
Query: 271 QDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVL 325
+G + APE ++ RK SDVWS G++ + ++ G RP+WD T + +
Sbjct: 169 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI- 227
Query: 326 RNKPDFRRKP 335
+ D+R P
Sbjct: 228 --EQDYRLPP 235
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 28/225 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G+ +G G FG Y+ TD A G+ VA+K + +K P +
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-------------LECVKTKHP----QLH 50
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E KI + + G + + +Y + MEL G L+ + +++ K ++
Sbjct: 51 IESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLL 108
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--------PGK 268
QM+ H +HRD+KP+NFL K+ + + DFGL+ + P +
Sbjct: 109 ADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYR 168
Query: 269 KFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF 312
+ +++ G+A Y + L + D+ S+G + G P+
Sbjct: 169 ENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 213
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 120/294 (40%), Gaps = 47/294 (15%)
Query: 89 GYDKDFD---RRYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKILIRVVSFQD 143
G +D++ R +G+ +G GQFG + + N K KN
Sbjct: 3 GSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN----------- 51
Query: 144 LKMILPIAVEDVKREVKILQALA----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDR 199
D RE + +AL H ++VK +N V+I MELC GEL
Sbjct: 52 -------CTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSF 103
Query: 200 ILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATD 257
+ +K Y+ A++++ A +L VHRD+ N L S + +K D
Sbjct: 104 LQVRK---YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGD 157
Query: 258 FGLSDFIKPGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFW 313
FGLS +++ ++ G ++APE + R+ SDVW GV + IL+ G +PF
Sbjct: 158 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 217
Query: 314 DKTEDGIFKEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 364
+ + + + R P P+ + + K DP R R T +A
Sbjct: 218 GVKNNDVIGRIENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 267
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 111/268 (41%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 67
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ +YI ME G LLD L + +Y V + Q+
Sbjct: 68 KKLR-HEKLVQLYAVVSEEP-IYIVMEYMSKGCLLD-FLKGEMGKYLRLPQLVDMAAQIA 124
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 125 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF---- 177
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 178 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 233
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + KDP R T
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 12/151 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++ + ++ F D D +G I+ E+ + + L E+ + +++ ID +
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVM-RSLGQNPTEAELRDMMSEIDRDG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 523
+G VDF EF+ + ++++ D+E+ + AF FD D +GF++ ELR G
Sbjct: 60 NGTVDFPEFLG--MMARKMKDTDNEE---EIREAFRVFDKDGNGFVSAAELRHVMTRLGE 114
Query: 524 KGS---IDPLLEEADIDKDGRISLSEFRRLL 551
K S +D ++ AD D DG+++ EF R+L
Sbjct: 115 KLSDEEVDEMIRAADTDGDGQVNYEEFVRVL 145
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 28/225 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G+ +G G FG Y+ TD A G+ VA+K + +K P +
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-------------LECVKTKHP----QLH 52
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E KI + + G + + +Y + MEL G L+ + +++ K ++
Sbjct: 53 IESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLL 110
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--------PGK 268
QM+ H +HRD+KP+NFL K+ + + DFGL+ + P +
Sbjct: 111 ADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYR 170
Query: 269 KFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF 312
+ +++ G+A Y + L + D+ S+G + G P+
Sbjct: 171 ENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 215
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + + + +D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELG-TVXRSLGQNPTEAELQDXINEVDADG 60
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
+G +DF EF+ T + ++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 61 NGTIDFPEFL--TXXARKXKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVXTNLGE 115
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEF 547
+D + EADID DG+++ EF
Sbjct: 116 KLTDEEVDQXIREADIDGDGQVNYEEF 142
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 115/283 (40%), Gaps = 44/283 (15%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
R +G+ +G GQFG + + N K KN D
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN------------------CTSD 52
Query: 155 VKREVKILQALA----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE + +AL H ++VK +N V+I MELC GEL + +K Y+
Sbjct: 53 SVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---YSL 108
Query: 211 KDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 165
Query: 269 KFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + + +
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 325 LRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 364
+ R P P+ + + K DP R R T +A
Sbjct: 226 ENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + + + +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELG-TVXRSLGQNPTEAELQDXINEVDADG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
+G +DF EF+ T + ++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TXXARKXKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVXTNLGE 114
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEF 547
+D + EADID DG+++ EF
Sbjct: 115 KLTDEEVDEXIREADIDGDGQVNYEEF 141
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 33/252 (13%)
Query: 102 KLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
K++G G+FG Y K + + VA+K ++ + V F
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLG-------------- 95
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E I+ + H N+++ + I E E G L D+ L +KD ++ ++
Sbjct: 96 EAGIMGQFS-HHNIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQLVGML 153
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG 275
R + VHRD+ N L S + K +DFGLS ++ P + G
Sbjct: 154 RGIAAGMKYLANMNYVHRDLAARNILVNS---NLVCKVSDFGLSRVLEDDPEATYTTSGG 210
Query: 276 --SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
+ APE + RK SDVWS G++ + ++ G RP+W+ + EV++ D
Sbjct: 211 KIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HEVMKAINDG 266
Query: 332 RRKPWPSISNSA 343
R P P SA
Sbjct: 267 FRLPTPMDCPSA 278
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 21/163 (12%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
+D +E+ L +F +D+D +GS+S+EE LP + V ++ D + +G
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTDGNGE 55
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHTG--- 522
VDF EF+ V Q ++ LR AF +D+D+DG+I+ E L+M G
Sbjct: 56 VDFKEFIEG---VSQFSVKGDKEQKLR--FAFRIYDMDKDGYISNGELFQVLKMMVGNNL 110
Query: 523 ----LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 561
L+ +D + AD D DGRIS EF ++ I + V
Sbjct: 111 KDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 153
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 115/283 (40%), Gaps = 44/283 (15%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
R +G+ +G GQFG + + N K KN D
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------------------CTSD 52
Query: 155 VKREVKILQALA----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE + +AL H ++VK +N V+I MELC GEL + +K Y+
Sbjct: 53 SVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---YSL 108
Query: 211 KDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 165
Query: 269 KFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + + +
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 325 LRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 364
+ R P P+ + + K DP R R T +A
Sbjct: 226 ENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 115/283 (40%), Gaps = 44/283 (15%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
R +G+ +G GQFG + + N K KN D
Sbjct: 13 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------------------CTSD 54
Query: 155 VKREVKILQALA----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE + +AL H ++VK +N V+I MELC GEL + +K Y+
Sbjct: 55 SVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---YSL 110
Query: 211 KDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 111 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 167
Query: 269 KFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + + +
Sbjct: 168 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 227
Query: 325 LRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 364
+ R P P+ + + K DP R R T +A
Sbjct: 228 ENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 266
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 113/281 (40%), Gaps = 41/281 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G +G +G +AVK+I V+ Q+ K +L ++ I
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRAT------VNSQEQKRLL--------MDLDISM 104
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
V FY A + V+I MEL +D L K + +K + + ++
Sbjct: 105 RTVDCPFTVTFYGALFREGDVWICMEL------MDTSLDKFYKQVIDKGQTIPEDILGKI 158
Query: 224 AAEC-----HLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
A HLH ++HRD+KP N L + + +K DFG+S ++ G
Sbjct: 159 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDSVAKTIDAG 215
Query: 276 SAYYVAPEVL-----KRKSGPESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNK 328
Y+APE + ++ +SD+WS+G+ L R P+ W + + V
Sbjct: 216 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS 275
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
P P S DF + L K+ + R T + + HP+
Sbjct: 276 PQL---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 115/283 (40%), Gaps = 44/283 (15%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
R +G+ +G GQFG + + N K KN D
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------------------CTSD 49
Query: 155 VKREVKILQALA----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE + +AL H ++VK +N V+I MELC GEL + +K Y+
Sbjct: 50 SVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---YSL 105
Query: 211 KDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 106 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 162
Query: 269 KFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + + +
Sbjct: 163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 222
Query: 325 LRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 364
+ R P P+ + + K DP R R T +A
Sbjct: 223 ENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 261
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 67
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ +YI +E G LLD L + +Y V + Q+
Sbjct: 68 KKLR-HEKLVQLYAVVSEEP-IYIVIEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIA 124
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 125 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEXTARQGAKF---- 177
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 178 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 233
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + KDP R T
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 62.0 bits (149), Expect = 9e-10, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
++ L +E++A+ ++ F D D +GSIS E+ + + L E+ V +++ ID +
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVM-RSLGLSPSEAEVADLMNEIDVD 59
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTG 522
+ ++FSEF+A L QL+ +DSE+ L AF+ FD + DG I+ EL+ G
Sbjct: 60 GNHAIEFSEFLA--LMSRQLKCNDSEQELLE---AFKVFDKNGDGLISAAELKHVLTSIG 114
Query: 523 LK---GSIDPLLEEADIDKDGRISLSEFRRLL 551
K +D +L E D G I++ +F LL
Sbjct: 115 EKLTDAEVDEMLREVS-DGSGEINIKQFAALL 145
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVAPE 283
G VHRD+ N L S + K +DFGL+ ++ P + G + +PE
Sbjct: 164 SDMGYVHRDLAARNILINS---NLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 284 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 38/254 (14%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+F R + T+GK LG G FG +A + V + K +K K + V +KM+ A
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVA----VKMLKDDA 79
Query: 152 VE----DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--- 204
E D+ E+++++ + H+N++ A D +Y+ + G L + + A++
Sbjct: 80 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPG 139
Query: 205 -----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
+ + T KD Q+ R +HRD+ N L E++ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVM 196
Query: 254 KATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCG 308
K DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 309 RRPFWDKTEDGIFK 322
P+ + +FK
Sbjct: 257 GSPYPGIPVEELFK 270
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 67
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ +YI +E G LLD L + +Y V + Q+
Sbjct: 68 KKLR-HEKLVQLYAVVSEEP-IYIVIEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIA 124
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 125 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF---- 177
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 178 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 233
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + KDP R T
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 115/283 (40%), Gaps = 44/283 (15%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
R +G+ +G GQFG + + N K KN D
Sbjct: 39 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------------------CTSD 80
Query: 155 VKREVKILQALA----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE + +AL H ++VK +N V+I MELC GEL + +K Y+
Sbjct: 81 SVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---YSL 136
Query: 211 KDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 137 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 193
Query: 269 KFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + + +
Sbjct: 194 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 253
Query: 325 LRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 364
+ R P P+ + + K DP R R T +A
Sbjct: 254 ENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 292
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 95/234 (40%), Gaps = 28/234 (11%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
I K++G G+FG K G R VA+K ++ + D + D
Sbjct: 18 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK--------AGYTDKQR------RDFL 63
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E I+ H N++ V I E E G L D L K D R+T +
Sbjct: 64 SEASIMGQF-DHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGM 121
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIV 274
+R + VHRD+ N L S + K +DFG+S ++ P +
Sbjct: 122 LRGIGSGMKYLSDMSYVHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYTTRG 178
Query: 275 G--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
G + APE + RK SDVWS G++ + ++ G RP+WD + + K +
Sbjct: 179 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 232
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 115/283 (40%), Gaps = 44/283 (15%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
R +G+ +G GQFG + + N K KN D
Sbjct: 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------------------CTSD 57
Query: 155 VKREVKILQALA----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE + +AL H ++VK +N V+I MELC GEL + +K Y+
Sbjct: 58 SVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---YSL 113
Query: 211 KDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 114 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 170
Query: 269 KFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + + +
Sbjct: 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 230
Query: 325 LRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 364
+ R P P+ + + K DP R R T +A
Sbjct: 231 ENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 269
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 95/234 (40%), Gaps = 28/234 (11%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
I K++G G+FG K G R VA+K ++ + D + D
Sbjct: 33 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK--------AGYTDKQR------RDFL 78
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E I+ H N++ V I E E G L D L K D R+T +
Sbjct: 79 SEASIMGQF-DHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGM 136
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIV 274
+R + VHRD+ N L S + K +DFG+S ++ P +
Sbjct: 137 LRGIGSGMKYLSDMSAVHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYTTRG 193
Query: 275 G--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
G + APE + RK SDVWS G++ + ++ G RP+WD + + K +
Sbjct: 194 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 95/234 (40%), Gaps = 28/234 (11%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
I K++G G+FG K G R VA+K ++ + D + D
Sbjct: 12 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK--------AGYTDKQR------RDFL 57
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E I+ H N++ V I E E G L D L K D R+T +
Sbjct: 58 SEASIMGQF-DHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGM 115
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIV 274
+R + VHRD+ N L S + K +DFG+S ++ P +
Sbjct: 116 LRGIGSGMKYLSDMSYVHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYTTRG 172
Query: 275 G--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
G + APE + RK SDVWS G++ + ++ G RP+WD + + K +
Sbjct: 173 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 226
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 38/254 (14%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+F R + T+GK LG G FG +A + V + K +K K + V +KM+ A
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVA----VKMLKDDA 79
Query: 152 VE----DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--- 204
E D+ E+++++ + H+N++ A D +Y+ + G L + + A++
Sbjct: 80 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPG 139
Query: 205 -----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
+ + T KD Q+ R +HRD+ N L E++ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVM 196
Query: 254 KATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCG 308
K DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 309 RRPFWDKTEDGIFK 322
P+ + +FK
Sbjct: 257 GSPYPGIPVEELFK 270
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 54/284 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG ++A K+K+L+ V + +D + A +D +RE ++L
Sbjct: 23 LGEGAFGKVFLA-------ECYNLSPTKDKMLVAVKALKDPTLA---ARKDFQREAELLT 72
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------DSRYTEKDAAVV 216
L HE++VKFY D + + + E + G+L + A D + + +
Sbjct: 73 NLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 217 VRQMLRVAAE-----CHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ QML +A++ +L VHRD+ N L + + +K DFG+S
Sbjct: 132 LSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA---NLLVKIGDFGMS-------- 180
Query: 270 FQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWDK 315
+D+ + YY + PE ++ RK ESDVWS GVI + I G++P++
Sbjct: 181 -RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQL 239
Query: 316 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 359
+ + + + + + R + P D + ++P+ RL
Sbjct: 240 SNTEVIECITQGRVLERPRVCP---KEVYDVMLGCWQREPQQRL 280
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 115/283 (40%), Gaps = 44/283 (15%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
R +G+ +G GQFG + + N K KN D
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN------------------CTSD 432
Query: 155 VKREVKILQALA----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE + +AL H ++VK +N V+I MELC GEL + +K ++
Sbjct: 433 SVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---FSL 488
Query: 211 KDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 545
Query: 269 KFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + + +
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
Query: 325 LRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 364
+ R P P+ + + K DP R R T +A
Sbjct: 606 ENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
D +E+ L +F +D+D +GS+S+EE LP + V ++ D + +G V
Sbjct: 1 DADEIKRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTDGNGEV 55
Query: 471 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHTG---- 522
DF EF+ V Q ++ LR AF +D+D+DG+I+ E L+M G
Sbjct: 56 DFKEFIEG---VSQFSVKGDKEQKLR--FAFRIYDMDKDGYISNGELFQVLKMMVGNNLK 110
Query: 523 ---LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 561
L+ +D + AD D DGRIS EF ++ I + V
Sbjct: 111 DTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 152
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 36/218 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG + DK G + AVKK +R+ F+ V+ L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKK-------VRLEVFR----------------VEELV 116
Query: 164 ALAGHEN--VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
A AG + +V Y A + +V I MEL EGG L I K+ E A + Q L
Sbjct: 117 ACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQAL 174
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKKFQD---IVG 275
H ++H D+K +N L S ++L DFG + ++P GK I G
Sbjct: 175 EGLEYLHTRRILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 276 SAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPF 312
+ ++APE V+ + + D+WS + +L G P+
Sbjct: 233 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 110/268 (41%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 67
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ +YI E G LLD L + +Y V + Q+
Sbjct: 68 KKLR-HEKLVQLYAVVSEEP-IYIVCEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIA 124
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 125 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF---- 177
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 178 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 233
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + KDP R T
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 110/268 (41%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 67
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ +YI E G LLD L + +Y V + Q+
Sbjct: 68 KKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIA 124
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 125 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF---- 177
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 178 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 233
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + KDP R T
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 109/268 (40%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 193 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGNM----------------SPEAFLQEAQVM 234
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ +YI E G LLD L + +Y V + Q+
Sbjct: 235 KKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIA 291
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL I + G KF
Sbjct: 292 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLGRLIEDNEYTARQGAKF---- 344
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 345 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 400
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + KDP R T
Sbjct: 401 MPCPPECPESLHDLMCQCWRKDPEERPT 428
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 110/268 (41%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 17 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 58
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ +YI E G LLD L + +Y V + Q+
Sbjct: 59 KKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIA 115
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 116 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF---- 168
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 169 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 224
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + KDP R T
Sbjct: 225 MPCPPECPESLHDLMCQCWRKDPEERPT 252
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 113/281 (40%), Gaps = 41/281 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G +G +G +AVK+I V+ Q+ K +L ++ I
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRAT------VNSQEQKRLL--------MDLDISM 60
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
V FY A + V+I MEL +D L K + +K + + ++
Sbjct: 61 RTVDCPFTVTFYGALFREGDVWICMEL------MDTSLDKFYKQVIDKGQTIPEDILGKI 114
Query: 224 AAEC-----HLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
A HLH ++HRD+KP N L + + +K DFG+S ++ G
Sbjct: 115 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDDVAKDIDAG 171
Query: 276 SAYYVAPEVL-----KRKSGPESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNK 328
Y+APE + ++ +SD+WS+G+ L R P+ W + + V
Sbjct: 172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS 231
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
P P S DF + L K+ + R T + + HP+
Sbjct: 232 PQL---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 116/263 (44%), Gaps = 56/263 (21%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG ++A E++KIL+ V + +D A +D RE ++L
Sbjct: 21 LGEGAFGKVFLAECYNLCP-------EQDKILVAVKTLKDAS---DNARKDFHREAELLT 70
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGEL--------LDRILAKKDSRYTEKDAAV 215
L HE++VKFY + + + + E + G+L D +L + + TE +
Sbjct: 71 NLQ-HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS- 128
Query: 216 VVRQMLRVAAECHL-------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
QML +A + VHRD+ N L E+ +K DFG+S
Sbjct: 129 ---QMLHIAQQIAAGMVYLASQHFVHRDLATRNCL---VGENLLVKIGDFGMS------- 175
Query: 269 KFQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWD 314
+D+ + YY + PE ++ RK ESDVWS+GV+ + I G++P++
Sbjct: 176 --RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ 233
Query: 315 KTEDGIFKEVLRNKPDFRRKPWP 337
+ + + + + + + R + P
Sbjct: 234 LSNNEVIECITQGRVLQRPRTCP 256
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 60.5 bits (145), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 12/147 (8%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + + + +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKEL-GTVXRSLGCNPTEAELQDXINEVDADG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 523
+G ++F EF+ T ++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTINFPEFL--TXXARCXKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVXTNLGE 114
Query: 524 ---KGSIDPLLEEADIDKDGRISLSEF 547
+D + EADID DG+++ EF
Sbjct: 115 KLTDEEVDEXIREADIDGDGQVNYEEF 141
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 110/268 (41%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 15 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 56
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ +YI E G LLD L + +Y V + Q+
Sbjct: 57 KKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIA 113
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 114 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF---- 166
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 167 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 222
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + KDP R T
Sbjct: 223 MPCPPECPESLHDLMCQCWRKDPEERPT 250
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 117/307 (38%), Gaps = 48/307 (15%)
Query: 86 TDFGYDKDFD---RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQ 142
T YD ++ R + GK LG G FG AT A I+ + + V
Sbjct: 33 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEAT--------AYGLIKSDAAMTVAV--- 81
Query: 143 DLKMILPIA----VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD 198
KM+ P A E + E+K+L L H N+V A + E C G+LL+
Sbjct: 82 --KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 139
Query: 199 RILAKKDSRYTEKDAAVVVR----------------QMLRVAAECHLHGLVHRDMKPENF 242
+ K+DS K + ++ Q+ + A +HRD+ N
Sbjct: 140 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 199
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPE-VLKRKSGPESDVWS 297
L + K DFGL+ IK + + G+A ++APE + ESDVWS
Sbjct: 200 LLTHGRIT---KICDFGLARHIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 298 IGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 356
G+ + L G P+ D F +++ K FR D +K DP
Sbjct: 256 YGIFLWELFSLGSSPYPGMPVDSKFYKMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPL 313
Query: 357 ARLTAAQ 363
R T Q
Sbjct: 314 KRPTFKQ 320
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY I L+G G FG A D+ + VA+K I+ K + +
Sbjct: 36 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFL----------------NQAQ 79
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDR----ILAKKDSR----- 207
EV++L+ + H+ +K+Y ++++ LC E+L +L + R
Sbjct: 80 IEVRLLELMNKHDTEMKYYIVHLKRHFMF-RNHLCLVFEMLSYNLYDLLRNTNFRGVSLN 138
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
T K A + +L +A ++H D+KPEN L + K S++K DFG S + G
Sbjct: 139 LTRKFAQQMCTALLFLATP--ELSIIHCDLKPENILLCNPKR-SAIKIVDFGSS--CQLG 193
Query: 268 KKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVI 301
++ + S +Y +PEV L D+WS+G I
Sbjct: 194 QRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCI 228
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY I L+G G FG A D+ + VA+K I+ K + +
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFL----------------NQAQ 98
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDR----ILAKKDSR----- 207
EV++L+ + H+ +K+Y ++++ LC E+L +L + R
Sbjct: 99 IEVRLLELMNKHDTEMKYYIVHLKRHFMF-RNHLCLVFEMLSYNLYDLLRNTNFRGVSLN 157
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
T K A + +L +A ++H D+KPEN L + K S++K DFG S + G
Sbjct: 158 LTRKFAQQMCTALLFLATP--ELSIIHCDLKPENILLCNPKR-SAIKIVDFGSS--CQLG 212
Query: 268 KKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVI 301
++ + S +Y +PEV L D+WS+G I
Sbjct: 213 QRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCI 247
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 33/263 (12%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG ++ T RVA+K ++ + + E +E ++++
Sbjct: 275 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----------------SPEAFLQEAQVMK 317
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLR 222
L HE +V+ Y ++ +YI E G LLD L + +Y V + Q+
Sbjct: 318 KLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIAS 374
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---Y 279
A VHRD++ N L E+ K DFGL+ I+ ++ G+ + +
Sbjct: 375 GMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKW 430
Query: 280 VAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 337
APE L + +SDVWS G+ +T + GR P+ + +V R +R P
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPP 487
Query: 338 SISNSAKDFVKKLLVKDPRARLT 360
S D + + K+P R T
Sbjct: 488 ECPESLHDLMCQCWRKEPEERPT 510
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 192 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 233
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ +YI E G LLD L + +Y V + Q+
Sbjct: 234 KKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIA 290
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 291 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF---- 343
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 344 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 399
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + K+P R T
Sbjct: 400 MPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 12/153 (7%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E+ ++R+ FD D D +G+I +E++ A+ + L ++ K+ + +++ ID + G
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAM-RALGFEPKKEEIKKMISEIDKDGSGT 80
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---- 525
+DF EF+ T+ ++ E DS + L+ AF FD D G IT ++LR G
Sbjct: 81 IDFEEFL--TMMTAKMGERDSREEILK---AFRLFDDDNSGTITIKDLRRVAKELGENLT 135
Query: 526 --SIDPLLEEADIDKDGRISLSEFRRLLRTASI 556
+ ++ EAD + D I EF R+++ S+
Sbjct: 136 EEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 168
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 67
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ + HE +V+ Y ++ +YI E G LLD L + +Y V + Q+
Sbjct: 68 KKIR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIA 124
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 125 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF---- 177
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 178 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 233
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + KDP R T
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 111/278 (39%), Gaps = 46/278 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDK-ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+Y + + HG G+ Y+A D+ NG V +K + + + L V
Sbjct: 81 QYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVV--- 137
Query: 156 KREVKILQALAGHENVVKFYNAFE-----DDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
H ++V+ +N E D YI ME GG+ L R K +
Sbjct: 138 ------------HPSIVQIFNFVEHTDRHGDPVGYIVMEYV-GGQSLKR---SKGQKLPV 181
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+A + ++L + H GLV+ D+KPEN + + LK D G I F
Sbjct: 182 AEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT----EEQLKLIDLGAVSRI---NSF 234
Query: 271 QDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE--VLRNK 328
+ G+ + APE+++ +D++++G L + DG+ ++ VL+
Sbjct: 235 GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTY 294
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366
+ R +++ + DPR R T A+ +S
Sbjct: 295 DSYGR------------LLRRAIDPDPRQRFTTAEEMS 320
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 36/218 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G FG + DK G + AVKK+ R+ F+ V+ L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFR----------------VEELV 102
Query: 164 ALAGHEN--VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
A AG + +V Y A + +V I MEL EGG L I K+ E A + Q L
Sbjct: 103 ACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQAL 160
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKKFQD---IVG 275
H ++H D+K +N L S ++L DFG + ++P GK I G
Sbjct: 161 EGLEYLHTRRILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 276 SAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPF 312
+ ++APE V+ + + D+WS + +L G P+
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 192 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 233
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ +YI E G LLD L + +Y V + Q+
Sbjct: 234 KKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIA 290
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 291 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF---- 343
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 344 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 399
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + K+P R T
Sbjct: 400 MPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 117/307 (38%), Gaps = 48/307 (15%)
Query: 86 TDFGYDKDFD---RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQ 142
T YD ++ R + GK LG G FG AT A I+ + + V
Sbjct: 26 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEAT--------AYGLIKSDAAMTVAV--- 74
Query: 143 DLKMILPIA----VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD 198
KM+ P A E + E+K+L L H N+V A + E C G+LL+
Sbjct: 75 --KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 132
Query: 199 RILAKKDSRYTEKDAAVVVR----------------QMLRVAAECHLHGLVHRDMKPENF 242
+ K+DS K + ++ Q+ + A +HRD+ N
Sbjct: 133 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 192
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPE-VLKRKSGPESDVWS 297
L + K DFGL+ IK + + G+A ++APE + ESDVWS
Sbjct: 193 LLTHGRIT---KICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWS 248
Query: 298 IGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 356
G+ + L G P+ D F +++ K FR D +K DP
Sbjct: 249 YGIFLWELFSLGSSPYPGMPVDSKFYKMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPL 306
Query: 357 ARLTAAQ 363
R T Q
Sbjct: 307 KRPTFKQ 313
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 36/218 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G FG + DK G + AVKK+ R+ F+ V+ L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFR----------------VEELV 118
Query: 164 ALAGHEN--VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
A AG + +V Y A + +V I MEL EGG L I K+ E A + Q L
Sbjct: 119 ACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQAL 176
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKKFQD---IVG 275
H ++H D+K +N L S ++L DFG + ++P GK I G
Sbjct: 177 EGLEYLHTRRILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 276 SAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPF 312
+ ++APE V+ + + D+WS + +L G P+
Sbjct: 235 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 110/268 (41%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 67
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ +YI E G LLD L + +Y V + Q+
Sbjct: 68 KKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGCLLD-FLKGEMGKYLRLPQLVDMAAQIA 124
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 125 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF---- 177
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 178 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 233
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + KDP R T
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 109/268 (40%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 67
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ +YI E G LLD L + +Y V + Q+
Sbjct: 68 KKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIA 124
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD+ N L E+ K DFGL+ I + G KF
Sbjct: 125 SGMAYVERMNYVHRDLAAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF---- 177
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 178 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 233
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + KDP R T
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 37/229 (16%)
Query: 93 DFDRR--YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
+FD R G G G FG Y N VAVKK L ++ I
Sbjct: 17 NFDERPISVGGNKXGEGGFGVVYKGY--VNNTTVAVKK---------------LAAMVDI 59
Query: 151 AVEDVKR----EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS 206
E++K+ E+K+ A HEN+V+ D + + + G LLDR+ +
Sbjct: 60 TTEELKQQFDQEIKV-XAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT 118
Query: 207 RYTEKDAAVVVRQMLRVAAE-CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 265
+ Q H + +HRD+K N L A + K +DFGL+ +
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA---FTAKISDFGLA---R 172
Query: 266 PGKKFQD------IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 308
+KF IVG+ Y APE L+ + P+SD++S GV+ ++ G
Sbjct: 173 ASEKFAQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 68/163 (41%), Gaps = 10/163 (6%)
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N+++ I E E G L D L D ++T ++R +
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVAPE 283
G VHRD+ N L S + K +DFGLS ++ P + G + APE
Sbjct: 168 SDLGYVHRDLAARNVLVDS---NLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPE 224
Query: 284 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ R SDVWS GV+ + +L G RP+W+ T + V
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 117/307 (38%), Gaps = 48/307 (15%)
Query: 86 TDFGYDKDFD---RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQ 142
T YD ++ R + GK LG G FG AT A I+ + + V
Sbjct: 10 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEAT--------AYGLIKSDAAMTVAV--- 58
Query: 143 DLKMILPIA----VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD 198
KM+ P A E + E+K+L L H N+V A + E C G+LL+
Sbjct: 59 --KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 116
Query: 199 RILAKKDSRYTEKDAAVVVR----------------QMLRVAAECHLHGLVHRDMKPENF 242
+ K+DS K + ++ Q+ + A +HRD+ N
Sbjct: 117 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 176
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY----YVAPE-VLKRKSGPESDVWS 297
L + K DFGL+ IK + + G+A ++APE + ESDVWS
Sbjct: 177 LLTHGRIT---KICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWS 232
Query: 298 IGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 356
G+ + L G P+ D F +++ K FR D +K DP
Sbjct: 233 YGIFLWELFSLGSSPYPGMPVDSKFYKMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPL 290
Query: 357 ARLTAAQ 363
R T Q
Sbjct: 291 KRPTFKQ 297
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 109/266 (40%), Gaps = 67/266 (25%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
+G+ +G G FG + +A+ VAVK R DLK +E
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSC-------RETLPPDLK-------AKFLQE 162
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV- 217
+IL+ + H N+V+ +YI MEL +GG+ L L + +R K +V
Sbjct: 163 ARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLT-FLRTEGARLRVKTLLQMVG 220
Query: 218 ---RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 274
M + ++C +HRD+ N L E + LK +DFG+S ++ D V
Sbjct: 221 DAAAGMEYLESKC----CIHRDLAARNCL---VTEKNVLKISDFGMS------REEADGV 267
Query: 275 GSAY---------YVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324
+A + APE L + ESDVWS G++ W+ G
Sbjct: 268 XAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGIL----------LWETFSLGA---- 313
Query: 325 LRNKPDFRRKPWPSISN-SAKDFVKK 349
P+P++SN ++FV+K
Sbjct: 314 ---------SPYPNLSNQQTREFVEK 330
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 19 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 60
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ +YI E G LLD L + +Y V + Q+
Sbjct: 61 KKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIA 117
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 118 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF---- 170
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 171 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 226
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + K+P R T
Sbjct: 227 MPCPPECPESLHDLMCQCWRKEPEERPT 254
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 44/283 (15%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
R +G+ +G GQFG + + N K KN D
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN------------------CTSD 52
Query: 155 VKREVKILQALA----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE + +AL H ++VK +N V+I MELC GEL + +K ++
Sbjct: 53 SVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---FSL 108
Query: 211 KDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 165
Query: 269 KFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ G ++APE + R+ SDVW GV + IL+ G +PF + + +
Sbjct: 166 XXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 325 LRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 364
+ R P P+ + + K DP R R T +A
Sbjct: 226 ENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 107/263 (40%), Gaps = 61/263 (23%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
+G+ +G G FG + +A+ VAVK R DLK +E
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSC-------RETLPPDLK-------AKFLQE 162
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV- 217
+IL+ + H N+V+ +YI MEL +GG+ L L + +R K +V
Sbjct: 163 ARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLT-FLRTEGARLRVKTLLQMVG 220
Query: 218 ---RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD------FIKPGK 268
M + ++C +HRD+ N L E + LK +DFG+S + G
Sbjct: 221 DAAAGMEYLESKC----CIHRDLAARNCL---VTEKNVLKISDFGMSREEADGVYAASGG 273
Query: 269 KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327
Q V + APE L + ESDVWS G++ W+ G
Sbjct: 274 LRQVPVK---WTAPEALNYGRYSSESDVWSFGIL----------LWETFSLGA------- 313
Query: 328 KPDFRRKPWPSISN-SAKDFVKK 349
P+P++SN ++FV+K
Sbjct: 314 ------SPYPNLSNQQTREFVEK 330
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Query: 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 467
S L +E +A+ + FD D D G IS++E+ + + L + + I++ +D +
Sbjct: 9 SYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVM-RMLGQTPTKEELDAIIEEVDEDGS 67
Query: 468 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-- 525
G +DF EF+ + V Q++E K F FD + DG+I EEL G
Sbjct: 68 GTIDFEEFL--VMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEH 125
Query: 526 ----SIDPLLEEADIDKDGRISLSEFRRLL 551
I+ L+++ D + DGRI EF +++
Sbjct: 126 VTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 23 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 64
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ +YI E G LLD L + +Y V + Q+
Sbjct: 65 KKLR-HEKLVQLYAVVSEEP-IYIVTEYMNKGSLLD-FLKGETGKYLRLPQLVDMSAQIA 121
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 122 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF---- 174
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 175 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 230
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + K+P R T
Sbjct: 231 MPCPPECPESLHDLMCQCWRKEPEERPT 258
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 23 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 64
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ +YI E G LLD L + +Y V + Q+
Sbjct: 65 KKLR-HEKLVQLYAVVSEEP-IYIVTEYMNKGSLLD-FLKGETGKYLRLPQLVDMSAQIA 121
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 122 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEWTARQGAKF---- 174
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 175 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 230
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + K+P R T
Sbjct: 231 MPCPPECPESLHDLMCQCWRKEPEERPT 258
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 114/283 (40%), Gaps = 44/283 (15%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
R +G+ +G GQFG + + N K KN D
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN------------------CTSD 432
Query: 155 VKREVKILQALA----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE + +AL H ++VK +N V+I MELC GEL + +K ++
Sbjct: 433 SVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---FSL 488
Query: 211 KDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
A++++ A +L VHRD+ N L + +K DFGLS +++
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSAT---DCVKLGDFGLSRYMEDST 545
Query: 269 KFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + + +
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
Query: 325 LRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 364
+ R P P+ + + K DP R R T +A
Sbjct: 606 ENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 32/222 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ LG GQ+G Y K VAVK ++++ + VE+ +E
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKE 64
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
+++ + H N+V+ + YI +E G LLD + ++ E +A V++
Sbjct: 65 AAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLY 120
Query: 219 QMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
++++ +HRD+ N L E+ +K DFGLS + G + G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAG 176
Query: 276 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 38/243 (15%)
Query: 84 KRTDFGYDKDFDRR------YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR 137
K T +G ++D+ T+ LG GQ+G Y K VAVK ++++
Sbjct: 241 KPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---- 296
Query: 138 VVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL 197
+ VE+ +E +++ + H N+V+ + YI E G LL
Sbjct: 297 ------------MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 343
Query: 198 DRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLK 254
D + ++ E +A V++ ++++ +HR++ N L E+ +K
Sbjct: 344 DYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL---VGENHLVK 397
Query: 255 ATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGR 309
DFGLS + G + G+ + + APE L K +SDVW+ GV+ + I G
Sbjct: 398 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 456
Query: 310 RPF 312
P+
Sbjct: 457 SPY 459
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 29/236 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
++ +G+ +G G FG Y+ T+ + VA+K +++K P + + K
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-------------LENVKTKHPQLLYESK 54
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
+ILQ G NV F E D Y + M+L G L+ + + + K ++
Sbjct: 55 -IYRILQGGTGIPNVRWF--GVEGD-YNVLVMDLL--GPSLEDLFNFCSRKLSLKTVLML 108
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--------PGK 268
QM+ H +HRD+KP+NFL + + + DFGL+ + P +
Sbjct: 109 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYR 168
Query: 269 KFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
+ +++ G+A Y + L + D+ S+G + L G P W + G K+
Sbjct: 169 ENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP-WQGLKAGTKKQ 223
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 192 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 233
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ +YI E G LLD L + +Y V + Q+
Sbjct: 234 KKLR-HEKLVQLYAVVSEEP-IYIVGEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIA 290
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 291 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF---- 343
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 344 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 399
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + K+P R T
Sbjct: 400 MPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 38/243 (15%)
Query: 84 KRTDFGYDKDFDRR------YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR 137
K T +G ++D+ T+ LG GQ+G Y K VAVK ++++
Sbjct: 199 KPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---- 254
Query: 138 VVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL 197
+ VE+ +E +++ + H N+V+ + YI E G LL
Sbjct: 255 ------------MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 301
Query: 198 DRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLK 254
D + ++ E +A V++ ++++ +HR++ N L E+ +K
Sbjct: 302 DYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL---VGENHLVK 355
Query: 255 ATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGR 309
DFGLS + G + G+ + + APE L K +SDVW+ GV+ + I G
Sbjct: 356 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 414
Query: 310 RPF 312
P+
Sbjct: 415 SPY 417
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 59.3 bits (142), Expect = 5e-09, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
Query: 400 QFALRALAS---TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL 456
++ LR L+ +L EE+ +LR+ F D DK+G I+ ++ + + + + E ++
Sbjct: 6 KYPLRNLSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELI 64
Query: 457 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS-QAAFEKFDIDRDGFITPE 515
E+ Q I+ N G VDF +FV L +L ++ ++ + AF +FD + DG I+
Sbjct: 65 ELSQQINMNLGGHVDFDDFV--ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTS 122
Query: 516 ELRM-------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 551
ELR H I+ ++ + D++ DGR+ EF R++
Sbjct: 123 ELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 165
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 59.3 bits (142), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
+S L +E++A+ ++ F D D NGSIS E+ + + L E+ V +++ ID +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVM-RSLGLSPSEAEVNDLMNEIDVDG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR 518
+ ++FSEF+A L QL+ +DSE+ L AF+ FD + DG I+ EL+
Sbjct: 60 NHQIEFSEFLA--LMSRQLKSNDSEQELLE---AFKVFDKNGDGLISAAELK 106
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 498 QAAFEKFDIDRDGFITPEELRM---HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLL 551
+ AF FD D +G I+ EL GL S ++ L+ E D+D + +I SEF L+
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 117/307 (38%), Gaps = 48/307 (15%)
Query: 86 TDFGYDKDFD---RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQ 142
T YD ++ R + GK LG G FG AT A I+ + + V
Sbjct: 28 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEAT--------AYGLIKSDAAMTVAV--- 76
Query: 143 DLKMILPIA----VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD 198
KM+ P A E + E+K+L L H N+V A + E C G+LL+
Sbjct: 77 --KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 134
Query: 199 RILAKKDSRYTEKDAAVVVR----------------QMLRVAAECHLHGLVHRDMKPENF 242
+ K+DS K + ++ Q+ + A +HRD+ N
Sbjct: 135 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 194
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPE-VLKRKSGPESDVWS 297
L + K DFGL+ IK + + G+A ++APE + ESDVWS
Sbjct: 195 LLTHGRIT---KICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWS 250
Query: 298 IGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 356
G+ + L G P+ D F +++ K FR D +K DP
Sbjct: 251 YGIFLWELFSLGSSPYPGMPVDSKFYKMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPL 308
Query: 357 ARLTAAQ 363
R T Q
Sbjct: 309 KRPTFKQ 315
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 117/307 (38%), Gaps = 48/307 (15%)
Query: 86 TDFGYDKDFD---RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQ 142
T YD ++ R + GK LG G FG AT A I+ + + V
Sbjct: 33 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEAT--------AYGLIKSDAAMTVAV--- 81
Query: 143 DLKMILPIA----VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD 198
KM+ P A E + E+K+L L H N+V A + E C G+LL+
Sbjct: 82 --KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 139
Query: 199 RILAKKDSRYTEKDAAVVVR----------------QMLRVAAECHLHGLVHRDMKPENF 242
+ K+DS K + ++ Q+ + A +HRD+ N
Sbjct: 140 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 199
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPE-VLKRKSGPESDVWS 297
L + K DFGL+ IK + + G+A ++APE + ESDVWS
Sbjct: 200 LLTHGRIT---KICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 298 IGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 356
G+ + L G P+ D F +++ K FR D +K DP
Sbjct: 256 YGIFLWELFSLGSSPYPGMPVDSKFYKMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPL 313
Query: 357 ARLTAAQ 363
R T Q
Sbjct: 314 KRPTFKQ 320
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG GQ+G Y K VAVK ++++ + VE+ +E +++
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKEAAVMK 62
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ H N+V+ + YI E G LLD + ++ E A V++ ++
Sbjct: 63 EIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQI 118
Query: 224 AAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 278
++ +HRD+ N L E+ +K DFGLS + G F G+ +
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPI 174
Query: 279 -YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ APE L K +SDVW+ GV+ + I G P+
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K +G G FG + G V K + K LI S + +MI ++ +REV I
Sbjct: 25 KQIGKGGFGLVH------KGRLVKDKSVVAIKSLILGDSEGETEMIE--KFQEFQREVFI 76
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
+ L H N+VK Y N + ME G+L R+L K +V +R ML
Sbjct: 77 MSNL-NHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLML 129
Query: 222 RVAAECHLH-----GLVHRDMKPENFLFKSAKEDSSL--KATDFGLSDFIKPGKKFQDIV 274
+A +VHRD++ N +S E++ + K DFGLS + ++
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLL 187
Query: 275 GSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPF 312
G+ ++APE + + ++D +S +I Y +L G PF
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG GQ+G YV K VAVK ++++ + VE+ +E +++
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKEAAVMK 83
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ H N+V+ + YI E G LLD + ++ E A V++ ++
Sbjct: 84 EIK-HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL---RECNREEVTAVVLLYMATQI 139
Query: 224 AAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 278
++ +HRD+ N L E+ +K DFGLS + G + G+ +
Sbjct: 140 SSAMEYLEKKNFIHRDLAARNCL---VGENHVVKVADFGLSRLMT-GDTYTAHAGAKFPI 195
Query: 279 -YVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPF 312
+ APE L + +SDVW+ GV+ + I G P+
Sbjct: 196 KWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 114/283 (40%), Gaps = 44/283 (15%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
R +G+ +G GQFG + + N K KN D
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN------------------CTSD 52
Query: 155 VKREVKILQALA----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE + +AL H ++VK +N V+I MELC GEL + +K ++
Sbjct: 53 SVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---FSL 108
Query: 211 KDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
A++++ A +L VHRD+ N L + +K DFGLS +++
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSAT---DCVKLGDFGLSRYMEDST 165
Query: 269 KFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + + +
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 325 LRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 364
+ R P P+ + + K DP R R T +A
Sbjct: 226 ENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL---RMHTG---L 523
+DF EF+ + V Q++E K F FD + DGFI EEL TG +
Sbjct: 73 IDFEEFL--VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVI 130
Query: 524 KGSIDPLLEEADIDKDGRISLSEFRRLL 551
+ I+ L++++D + DGRI EF +++
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 58.9 bits (141), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS--- 526
+DF EF+ + V Q++E K + F FD + DGFI EEL G
Sbjct: 73 IDFEEFL--VMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLL 551
I+ L++++D + DGRI EF +++
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG GQ+G Y K VAVK ++++ + VE+ +E +++
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKEAAVMK 65
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ H N+V+ + YI E G LLD + ++ E +A V++ ++
Sbjct: 66 EIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQI 121
Query: 224 AAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 278
++ +HRD+ N L E+ +K DFGLS + G + G+ +
Sbjct: 122 SSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPI 177
Query: 279 -YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ APE L K +SDVW+ GV+ + I G P+
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 32/222 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ LG GQ+G Y K VAVK ++++ + VE+ +E
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKE 61
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
+++ + H N+V+ + YI E G LLD + ++ E +A V++
Sbjct: 62 AAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLY 117
Query: 219 QMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
++++ +HRD+ N L E+ +K DFGLS + G + G
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAPAG 173
Query: 276 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 38/243 (15%)
Query: 84 KRTDFGYDKDFDRR------YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR 137
K T +G ++D+ T+ LG GQ+G Y K VAVK ++++
Sbjct: 202 KPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---- 257
Query: 138 VVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL 197
+ VE+ +E +++ + H N+V+ + YI E G LL
Sbjct: 258 ------------MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 304
Query: 198 DRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLK 254
D + ++ E A V++ ++++ +HR++ N L E+ +K
Sbjct: 305 DYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL---VGENHLVK 358
Query: 255 ATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGR 309
DFGLS + G + G+ + + APE L K +SDVW+ GV+ + I G
Sbjct: 359 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 417
Query: 310 RPF 312
P+
Sbjct: 418 SPY 420
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 32/222 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ LG GQ+G Y K VAVK ++++ + VE+ +E
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKE 64
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
+++ + H N+V+ + YI E G LLD + ++ E +A V++
Sbjct: 65 AAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLY 120
Query: 219 QMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
++++ +HRD+ N L E+ +K DFGLS + G + G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAG 176
Query: 276 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 58.9 bits (141), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 468
+L EE+ +LR+ F D DK+G I+ ++ + + + + E ++E+ Q I+ N G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELIELSQQINMNLGG 62
Query: 469 LVDFSEFVAATLHVHQLEEHDSEKWHLRS-QAAFEKFDIDRDGFITPEELRM-------H 520
VDF +FV L +L ++ ++ + AF +FD + DG I+ ELR H
Sbjct: 63 HVDFDDFV--ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGH 120
Query: 521 TGLKGSIDPLLEEADIDKDGRISLSEFRRLL 551
I+ ++ + D++ DGR+ EF R++
Sbjct: 121 QVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 404 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 463
+ LA T D + +LRD F D + +G IS E+R+A+ L ++ + EI++ +D
Sbjct: 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVD 135
Query: 464 CNTDGLVDFSEFV 476
N DG VDF EFV
Sbjct: 136 LNGDGRVDFEEFV 148
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 99/237 (41%), Gaps = 43/237 (18%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
GK LG G FG AT G AV K+ +++ + D K E + E+
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK--MLKSTAHADEK-------EALMSEL 100
Query: 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV-- 217
KI+ L HEN+V A V + E C G+LL+ + ++ SR E D A +
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIAN 158
Query: 218 -----RQMLRVAAECHLHGL--------VHRDMKPENFLFKSAKEDSSLKATDFGL---- 260
R +L +++ G+ +HRD+ N L + K DFGL
Sbjct: 159 STASTRDLLHFSSQVA-QGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDI 214
Query: 261 ---SDFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 312
S++I G + ++APE + +SDVWS G++ + I G P+
Sbjct: 215 MNDSNYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 99/237 (41%), Gaps = 43/237 (18%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
GK LG G FG AT G AV K+ +++ + D K E + E+
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK--MLKSTAHADEK-------EALMSEL 100
Query: 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV-- 217
KI+ L HEN+V A V + E C G+LL+ + ++ SR E D A +
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIAN 158
Query: 218 -----RQMLRVAAECHLHGL--------VHRDMKPENFLFKSAKEDSSLKATDFGL---- 260
R +L +++ G+ +HRD+ N L + K DFGL
Sbjct: 159 STLSTRDLLHFSSQVA-QGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDI 214
Query: 261 ---SDFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 312
S++I G + ++APE + +SDVWS G++ + I G P+
Sbjct: 215 MNDSNYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG GQ+G Y K VAVK ++++ + VE+ +E +++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKEAAVMK 64
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ H N+V+ + YI +E G LLD + ++ E A V++ ++
Sbjct: 65 EIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQI 120
Query: 224 AAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 278
++ +HRD+ N L E+ +K DFGLS + G + G+ +
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 176
Query: 279 -YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ APE L K +SDVW+ GV+ + I G P+
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 32/222 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ LG GQ+G Y K VAVK ++++ + VE+ +E
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKE 59
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
+++ + H N+V+ + YI E G LLD + ++ E +A V++
Sbjct: 60 AAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLY 115
Query: 219 QMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
++++ +HRD+ N L E+ +K DFGLS + G + G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAG 171
Query: 276 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 34/236 (14%)
Query: 87 DFGYDK-DFDRR-YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL 144
D YDK + +R T+ LG GQ+G Y K VAVK ++++
Sbjct: 4 DPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------- 52
Query: 145 KMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
+ VE+ +E +++ + H N+V+ + YI E G LLD + +
Sbjct: 53 -----MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---R 103
Query: 205 DSRYTEKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261
+ E +A V++ ++++ +HRD+ N L E+ +K DFGLS
Sbjct: 104 ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLS 160
Query: 262 DFIKPGKKFQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ G + G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 161 RLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 32/215 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY I L+G G FG A D+ + VA+K I+ K + +
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFL----------------NQAQ 98
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDR----ILAKKDSR----- 207
EV++L+ + H+ +K+Y ++++ LC E+L +L + R
Sbjct: 99 IEVRLLELMNKHDTEMKYYIVHLKRHFMF-RNHLCLVFEMLSYNLYDLLRNTNFRGVSLN 157
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
T K A + +L +A ++H D+KPEN L + K ++K DFG S + G
Sbjct: 158 LTRKFAQQMCTALLFLATP--ELSIIHCDLKPENILLCNPKR-XAIKIVDFGSS--CQLG 212
Query: 268 KKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVI 301
++ + S +Y +PEV L D+WS+G I
Sbjct: 213 QRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCI 247
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 32/222 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ LG GQ+G Y K VAVK ++++ + VE+ +E
Sbjct: 29 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKE 72
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
+++ + H N+V+ + YI E G LLD + ++ E +A V++
Sbjct: 73 AAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLY 128
Query: 219 QMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
++++ +HRD+ N L E+ +K DFGLS + G + G
Sbjct: 129 MATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAG 184
Query: 276 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 185 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 32/222 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ LG GQ+G Y K VAVK ++++ + VE+ +E
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKE 61
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
+++ + H N+V+ + YI E G LLD + ++ E +A V++
Sbjct: 62 AAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLY 117
Query: 219 QMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
++++ +HRD+ N L E+ +K DFGLS + G + G
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAG 173
Query: 276 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 32/222 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ LG GQ+G Y K VAVK ++++ + VE+ +E
Sbjct: 20 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKE 63
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
+++ + H N+V+ + YI E G LLD + ++ E +A V++
Sbjct: 64 AAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLY 119
Query: 219 QMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
++++ +HRD+ N L E+ +K DFGLS + G + G
Sbjct: 120 MATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAG 175
Query: 276 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 176 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG GQ+G Y K VAVK ++++ + VE+ +E +++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKEAAVMK 64
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ H N+V+ + YI +E G LLD + ++ E A V++ ++
Sbjct: 65 EIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQI 120
Query: 224 AAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 278
++ +HRD+ N L E+ +K DFGLS + G + G+ +
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 176
Query: 279 -YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ APE L K +SDVW+ GV+ + I G P+
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 32/222 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ LG GQ+G Y K VAVK ++++ + VE+ +E
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKE 64
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
+++ + H N+V+ + YI E G LLD + ++ E +A V++
Sbjct: 65 AAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLY 120
Query: 219 QMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
++++ +HRD+ N L E+ +K DFGLS + G + G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAG 176
Query: 276 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS--- 526
+DF EF+ + V Q++E K F FD + DGFI EEL G
Sbjct: 73 IDFEEFL--VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLL 551
I+ L++++D + DGRI EF +++
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 69
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS--- 526
+DF EF+ + V Q++E K F FD + DGFI EEL G
Sbjct: 70 IDFEEFL--VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVT 127
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLL 551
I+ L++++D + DGRI EF +++
Sbjct: 128 EEDIEDLMKDSDKNNDGRIDFDEFLKMM 155
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 468
+L EE+ +LR+ F D DK+G I+ ++ + + + + E ++E+ Q I+ N G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELIELSQQINMNLGG 62
Query: 469 LVDFSEFVAATLHVHQLEEHDSEKWHLRS-QAAFEKFDIDRDGFITPEELRM-------H 520
VDF +FV L +L ++ ++ + AF +FD + DG I+ ELR H
Sbjct: 63 HVDFDDFV--ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGH 120
Query: 521 TGLKGSIDPLLEEADIDKDGRISLSEFRRLL 551
I+ ++ + D++ DGR+ EF R++
Sbjct: 121 QVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 404 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 463
+ LA T D + +LRD F D + +G IS E+R+A+ K L ++ + EI++ +D
Sbjct: 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVD 135
Query: 464 CNTDGLVDFSEFV 476
N DG VDF EFV
Sbjct: 136 LNGDGRVDFEEFV 148
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 30/220 (13%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ K LG GQFG + K D VAVK I++ + + ++ +E
Sbjct: 11 TLLKELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSM----------------SEDEFFQE 53
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VV 217
+ + L+ H +VKFY + +YI E G LL+ + + + E + +
Sbjct: 54 AQTMMKLS-HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMC 110
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
+ A H +HRD+ N L D +K +DFG++ ++ ++ VG+
Sbjct: 111 YDVCEGMAFLESHQFIHRDLAARNCL---VDRDLCVKVSDFGMTRYVL-DDQYVSSVGTK 166
Query: 278 Y---YVAPEVLKR-KSGPESDVWSIGVITY-ILLCGRRPF 312
+ + APEV K +SDVW+ G++ + + G+ P+
Sbjct: 167 FPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY 206
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS--- 526
+DF EF+ + V Q++E K F FD + DGFI EEL G
Sbjct: 73 IDFEEFL--VMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLL 551
I+ L++++D + DGRI EF +++
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 32/222 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ LG GQ+G Y K VAVK ++++ + VE+ +E
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKE 59
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
+++ + H N+V+ + YI E G LLD + ++ E +A V++
Sbjct: 60 AAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLY 115
Query: 219 QMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
++++ +HRD+ N L E+ +K DFGLS + G + G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAG 171
Query: 276 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 115/254 (45%), Gaps = 45/254 (17%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
+D F++ IG+L+G G+FG Y + +G+ VA++ I D++
Sbjct: 28 WDIPFEQ-LEIGELIGKGRFGQVY--HGRWHGE-VAIRLI-------------DIERDNE 70
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK---DS 206
++ KREV + HENVV F A ++ I LC+G L + K D
Sbjct: 71 DQLKAFKREVMAYRQ-TRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDV 129
Query: 207 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL---SDF 263
T + A +V+ M H G++H+D+K +N + + K + TDFGL S
Sbjct: 130 NKTRQIAQEIVKGM----GYLHAKGILHKDLKSKNVFYDNGK----VVITDFGLFSISGV 181
Query: 264 IKPGK---KFQDIVGSAYYVAPEVLKRKS----------GPESDVWSIGVITYILLCGRR 310
++ G+ K + G ++APE++++ S SDV+++G I Y L
Sbjct: 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREW 241
Query: 311 PFWDKTEDGIFKEV 324
PF + + I ++
Sbjct: 242 PFKTQPAEAIIWQM 255
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 122/287 (42%), Gaps = 48/287 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G+FG + + +G A+K+ +K + + ++ REV
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKK-------------PLAGSVDEQNALREVYAHA 63
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQML 221
L H +VV++++A+ +D+++ I E C GG L D I + S + E + ++ Q+
Sbjct: 64 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 222 RVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATD----------FGLSDFIKPGKKF 270
R H LVH D+KP N F+ +++ +++ + D F + D +
Sbjct: 124 RGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 183
Query: 271 QDIV--GSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF------WDKTEDGI 320
V G + ++A EVL+ P++D++++ +T + G P W + G
Sbjct: 184 SPQVEEGDSRFLANEVLQENYTHLPKADIFALA-LTVVCAAGAEPLPRNGDQWHEIRQGR 242
Query: 321 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
+ + +S + +K ++ DP R +A + H
Sbjct: 243 LPRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG GQ+G Y K VAVK ++++ + VE+ +E +++
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKEAAVMK 69
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ H N+V+ + YI E G LLD + ++ E A V++ ++
Sbjct: 70 EIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQI 125
Query: 224 AAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 278
++ +HRD+ N L E+ +K DFGLS + G + G+ +
Sbjct: 126 SSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 181
Query: 279 -YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ APE L K +SDVW+ GV+ + I G P+
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 122/287 (42%), Gaps = 48/287 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G+FG + + +G A+K+ +K + + ++ REV
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKK-------------PLAGSVDEQNALREVYAHA 63
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQML 221
L H +VV++++A+ +D+++ I E C GG L D I + S + E + ++ Q+
Sbjct: 64 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 222 RVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATD----------FGLSDFIKPGKKF 270
R H LVH D+KP N F+ +++ +++ + D F + D +
Sbjct: 124 RGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 183
Query: 271 QDIV--GSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF------WDKTEDGI 320
V G + ++A EVL+ P++D++++ +T + G P W + G
Sbjct: 184 SPQVEEGDSRFLANEVLQENYTHLPKADIFALA-LTVVCAAGAEPLPRNGDQWHEIRQGR 242
Query: 321 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
+ + +S + +K ++ DP R +A + H
Sbjct: 243 LPRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 10/163 (6%)
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N+++ I E E G L D L D ++T ++R +
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVAPE 283
G VHRD+ N L S + K +DFGLS ++ P G + APE
Sbjct: 168 SDLGYVHRDLAARNVLVDS---NLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPE 224
Query: 284 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ R SDVWS GV+ + +L G RP+W+ T + V
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG GQ+G Y K VAVK ++++ + VE+ +E +++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKEAAVMK 64
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ H N+V+ + YI E G LLD + ++ E A V++ ++
Sbjct: 65 EIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQI 120
Query: 224 AAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 278
++ +HRD+ N L E+ +K DFGLS + G + G+ +
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 176
Query: 279 -YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ APE L K +SDVW+ GV+ + I G P+
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 122/287 (42%), Gaps = 48/287 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G+FG + + +G A+K+ +K + + ++ REV
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIKRSKK-------------PLAGSVDEQNALREVYAHA 65
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQML 221
L H +VV++++A+ +D+++ I E C GG L D I + S + E + ++ Q+
Sbjct: 66 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 125
Query: 222 RVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATD----------FGLSDFIKPGKKF 270
R H LVH D+KP N F+ +++ +++ + D F + D +
Sbjct: 126 RGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 185
Query: 271 QDIV--GSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF------WDKTEDGI 320
V G + ++A EVL+ P++D++++ +T + G P W + G
Sbjct: 186 SPQVEEGDSRFLANEVLQENYTHLPKADIFALA-LTVVCAAGAEPLPRNGDQWHEIRQGR 244
Query: 321 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
+ + +S + +K ++ DP R +A + H
Sbjct: 245 LPRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKH 280
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 95/230 (41%), Gaps = 33/230 (14%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
GK LG G FG AT G AV K+ +++ + D K E + E+
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK--MLKSTAHADEK-------EALMSEL 100
Query: 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI-------LAKKDSRYTE-K 211
KI+ L HEN+V A V + E C G+LL+ + L K+D R E +
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 160
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-------SDFI 264
D Q+ + A +HRD+ N L + K DFGL S++I
Sbjct: 161 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDSNYI 217
Query: 265 KPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 312
G + ++APE + +SDVWS G++ + I G P+
Sbjct: 218 VKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ LG GQ+G Y K VAVK ++++ + VE+ +E
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKE 59
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
+++ + H N+V+ + YI E G LLD + ++ E A V++
Sbjct: 60 AAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLY 115
Query: 219 QMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
++++ +HRD+ N L E+ +K DFGLS + G + G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAG 171
Query: 276 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 122/287 (42%), Gaps = 48/287 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G+FG + + +G A+K+ +K + + ++ REV
Sbjct: 15 IGSGEFGSVFKCVKRLDGCIYAIKRSKK-------------PLAGSVDEQNALREVYAHA 61
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQML 221
L H +VV++++A+ +D+++ I E C GG L D I + S + E + ++ Q+
Sbjct: 62 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 121
Query: 222 RVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATD----------FGLSDFIKPGKKF 270
R H LVH D+KP N F+ +++ +++ + D F + D +
Sbjct: 122 RGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 181
Query: 271 QDIV--GSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF------WDKTEDGI 320
V G + ++A EVL+ P++D++++ +T + G P W + G
Sbjct: 182 SPQVEEGDSRFLANEVLQENYTHLPKADIFALA-LTVVXAAGAEPLPRNGDQWHEIRQGR 240
Query: 321 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
+ + +S + +K ++ DP R +A + H
Sbjct: 241 LPRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKH 276
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 95/230 (41%), Gaps = 33/230 (14%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
GK LG G FG AT G AV K+ +++ + D K E + E+
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK--MLKSTAHADEK-------EALMSEL 92
Query: 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI-------LAKKDSRYTE-K 211
KI+ L HEN+V A V + E C G+LL+ + L K+D R E +
Sbjct: 93 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 152
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-------SDFI 264
D Q+ + A +HRD+ N L + K DFGL S++I
Sbjct: 153 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDSNYI 209
Query: 265 KPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 312
G + ++APE + +SDVWS G++ + I G P+
Sbjct: 210 VKGNARLPV----KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 133/341 (39%), Gaps = 92/341 (26%)
Query: 97 RYTIGKLLGHGQFGYTYVATD-KANGDRVA---VKKIEKNKILIRVVSFQDLKMILPIAV 152
RY I LG G FG D + G RVA +K +EK K
Sbjct: 34 RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYK------------------- 74
Query: 153 EDVKREVKILQAL----AGHENV-VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
E + E+ +L+ + ++N+ V+ ++ F+ ++ I+ EL G D +
Sbjct: 75 EAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLP 133
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-----------KEDSSLKAT 256
Y + Q+ + H + L H D+KPEN LF ++ +++ S+K+T
Sbjct: 134 YPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKST 193
Query: 257 -----DFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRR 310
DFG + F + IV + +Y APEV L+ DVWSIG I + G
Sbjct: 194 AVRVVDFGSATF--DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFT 251
Query: 311 PFWDKTEDG-----------------IFKEVLRNKPDFR-RKPWPSISNSAK-------- 344
F +T D + ++ + K +R R W +++ +
Sbjct: 252 LF--QTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKP 309
Query: 345 ----------------DFVKKLLVKDPRARLTAAQALSHPW 369
D ++ +L +P RLT +AL HP+
Sbjct: 310 LRRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPF 350
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 404 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 463
+ +A L +EE+ L++ F ID D +G+I+ +E++ L K + +L ES + +++ A D
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAAD 69
Query: 464 CNTDGLVDFSEFVAATLH 481
+ G +D+ EF+AAT+H
Sbjct: 70 IDKSGTIDYGEFIAATVH 87
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Query: 501 FEKFDIDRDGFITPEELRMHTGLK--GS------IDPLLEEADIDKDGRISLSEF 547
F+ D D G IT +EL+ GLK GS I L++ ADIDK G I EF
Sbjct: 29 FKMIDTDNSGTITFDELK--DGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEF 81
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 34/229 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G GQFG ++ N D+VA+K I + + + ED E +++
Sbjct: 15 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAM----------------SEEDFIEEAEVMM 57
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV---VVRQM 220
L+ H +V+ Y + + + E E G L D + ++ E + V M
Sbjct: 58 KLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGM 116
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 278
+ C ++HRD+ N L E+ +K +DFG++ F+ ++ G+ +
Sbjct: 117 AYLEEAC----VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPV 168
Query: 279 -YVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 324
+ +PEV + +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 32/222 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ LG GQ+G Y K VAVK ++++ + VE+ +E
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKE 60
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
+++ + H N+V+ + YI +E G LLD + ++ E +A V++
Sbjct: 61 AAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLY 116
Query: 219 QMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
++++ +HRD+ N L E+ +K DFGLS + G G
Sbjct: 117 MATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTXTAHAG 172
Query: 276 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 173 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 34/229 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G GQFG ++ N D+VA+K I + + + ED E +++
Sbjct: 13 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAM----------------SEEDFIEEAEVMM 55
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV---VVRQM 220
L+ H +V+ Y + + + E E G L D + ++ E + V M
Sbjct: 56 KLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGM 114
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 278
+ C ++HRD+ N L E+ +K +DFG++ F+ ++ G+ +
Sbjct: 115 AYLEEAC----VIHRDLAARNCL---VGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPV 166
Query: 279 -YVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 324
+ +PEV + +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 34/229 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G GQFG ++ N D+VA+K I + + + ED E +++
Sbjct: 18 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAM----------------SEEDFIEEAEVMM 60
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV---VVRQM 220
L+ H +V+ Y + + + E E G L D + ++ E + V M
Sbjct: 61 KLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGM 119
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 278
+ C ++HRD+ N L E+ +K +DFG++ F+ ++ G+ +
Sbjct: 120 AYLEEAC----VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPV 171
Query: 279 -YVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 324
+ +PEV + +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 32/217 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG GQFG Y K VAVK ++++ + VE+ +E +++
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKEAAVMK 62
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ H N+V+ + YI E G LLD + ++ E A V++ ++
Sbjct: 63 EIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQI 118
Query: 224 AAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 278
++ +HRD+ N L E+ +K DFGLS + G G+ +
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPI 174
Query: 279 -YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ APE L K +SDVW+ GV+ + I G P+
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K +G G FG + G V K + K LI S + +MI ++ +REV I
Sbjct: 25 KQIGKGGFGLVH------KGRLVKDKSVVAIKSLILGDSEGETEMIE--KFQEFQREVFI 76
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
+ L H N+VK Y N + ME G+L R+L K +V +R ML
Sbjct: 77 MSNL-NHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLML 129
Query: 222 RVAAECHLH-----GLVHRDMKPENFLFKSAKEDSSL--KATDFGLSDFIKPGKKFQDIV 274
+A +VHRD++ N +S E++ + K DFG S + ++
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLL 187
Query: 275 GSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPF 312
G+ ++APE + + ++D +S +I Y +L G PF
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 34/229 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G GQFG ++ N D+VA+K I + + + ED E +++
Sbjct: 16 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAM----------------SEEDFIEEAEVMM 58
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV---VVRQM 220
L+ H +V+ Y + + + E E G L D + ++ E + V M
Sbjct: 59 KLS-HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGM 117
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 278
+ C ++HRD+ N L E+ +K +DFG++ F+ ++ G+ +
Sbjct: 118 AYLEEAC----VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPV 169
Query: 279 -YVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 324
+ +PEV + +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 108/259 (41%), Gaps = 48/259 (18%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA----VEDV 155
GK+LG G FG AT A G I K + I+V +KM+ A E +
Sbjct: 49 FGKVLGSGAFGKVMNAT--AYG-------ISKTGVSIQVA----VKMLKEKADSSEREAL 95
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---------- 205
E+K++ L HEN+V A +Y+ E C G+LL+ + +K++
Sbjct: 96 MSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 155
Query: 206 -----------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254
+ T +D Q+ + VHRD+ N L K +K
Sbjct: 156 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK---VVK 212
Query: 255 ATDFGLSDFIKPGKKFQDIVGSAY----YVAPEVL-KRKSGPESDVWSIGVITY-ILLCG 308
DFGL+ I + + G+A ++APE L + +SDVWS G++ + I G
Sbjct: 213 ICDFGLARDIMSDSNYV-VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLG 271
Query: 309 RRPFWDKTEDGIFKEVLRN 327
P+ D F ++++N
Sbjct: 272 VNPYPGIPVDANFYKLIQN 290
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 28/225 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+Y +G+ +G G FG Y+ + A+G+ VA+K + +K P +
Sbjct: 10 KYRLGRKIGSGSFGDIYLGANIASGEEVAIK-------------LECVKTKHP----QLH 52
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E K + + G + + +Y + MEL G L+ + +++ K ++
Sbjct: 53 IESKFYKMMQGGVGIPSIKWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLL 110
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--------PGK 268
QM+ H +HRD+KP+NFL K+ + + DFGL+ + P +
Sbjct: 111 ADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYR 170
Query: 269 KFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF 312
+ +++ G+A Y + L + D+ S+G + G P+
Sbjct: 171 ENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 215
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG GQ+G Y K VAVK ++++ + VE+ +E +++
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKEAAVMK 62
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ H N+V+ + YI +E G LLD + ++ E A V++ ++
Sbjct: 63 EIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQI 118
Query: 224 AAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 278
++ +HRD+ N L E+ +K DFGLS + G G+ +
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPI 174
Query: 279 -YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ APE L K +SDVW+ GV+ + I G P+
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 91/214 (42%), Gaps = 30/214 (14%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
LG G FG Y G++VAVK ++ + D+K+E+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--------------DLKKEI 74
Query: 160 KILQALAGHENVVKFYNAFEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
+IL+ L HEN+VK+ +D N + + ME G L L K ++ K
Sbjct: 75 EILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSL-KEYLPKNKNKINLKQQLKYA 132
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV--- 274
Q+ + VHRD+ N L +S + +K DFGL+ I+ K+ +
Sbjct: 133 VQICKGMDYLGSRQYVHRDLAARNVLVES---EHQVKIGDFGLTKAIETDKEXXTVKDDR 189
Query: 275 -GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 306
++ APE L + K SDVWS GV + LL
Sbjct: 190 DSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K +G G FG + G V K + K LI S + +MI ++ +REV I
Sbjct: 25 KQIGKGGFGLVH------KGRLVKDKSVVAIKSLILGDSEGETEMIE--KFQEFQREVFI 76
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
+ L H N+VK Y N + ME G+L R+L K +V +R ML
Sbjct: 77 MSNL-NHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLML 129
Query: 222 RVAAECHLH-----GLVHRDMKPENFLFKSAKEDSSL--KATDFGLSDFIKPGKKFQDIV 274
+A +VHRD++ N +S E++ + K DF LS + ++
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLL 187
Query: 275 GSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPF 312
G+ ++APE + + ++D +S +I Y +L G PF
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 91/214 (42%), Gaps = 30/214 (14%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
LG G FG Y G++VAVK ++ + D+K+E+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--------------DLKKEI 62
Query: 160 KILQALAGHENVVKFYNAFEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
+IL+ L HEN+VK+ +D N + + ME G L L K ++ K
Sbjct: 63 EILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSL-KEYLPKNKNKINLKQQLKYA 120
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV--- 274
Q+ + VHRD+ N L +S + +K DFGL+ I+ K+ +
Sbjct: 121 VQICKGMDYLGSRQYVHRDLAARNVLVES---EHQVKIGDFGLTKAIETDKEXXTVKDDR 177
Query: 275 -GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 306
++ APE L + K SDVWS GV + LL
Sbjct: 178 DSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ LG GQ+G Y K VAVK ++++ + VE+ +E
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKE 64
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
+++ + H N+V+ + YI E G LLD + ++ E +A V++
Sbjct: 65 AAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLY 120
Query: 219 QMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
++++ +HRD+ N L E+ +K DFGLS + G G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTXTAHAG 176
Query: 276 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 109/268 (40%), Gaps = 43/268 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 16 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 57
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y ++ + I E G LLD L + +Y V + Q+
Sbjct: 58 KKLR-HEKLVQLYAVVSEEP-IXIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIA 114
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 115 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEXTARQGAKF---- 167
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R +R
Sbjct: 168 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YR 223
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT 360
P S D + + K+P R T
Sbjct: 224 MPCPPECPESLHDLMCQCWRKEPEERPT 251
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 17/159 (10%)
Query: 381 IDISVLNNMRQFVKYSRLKQFALRALASTLD--DEELADLRDQFDAIDVDKNGSISLEEM 438
I +VLNNM+ ++K+S ++ + +A L + + + + F +D + NGS+S E+
Sbjct: 2 ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREI 61
Query: 439 RQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 498
LA +K+ + ILQA+D N G + ++EF+A +E +
Sbjct: 62 YTVLAS---VGIKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIES-------TFLK 111
Query: 499 AAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADID 537
AAF K D D DG+I+ ++ + D +L+ DID
Sbjct: 112 AAFNKIDKDEDGYISKSDI-----VSLVHDKVLDNNDID 145
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 103/229 (44%), Gaps = 34/229 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G GQFG ++ N D+VA+K I++ + + +D E +++
Sbjct: 35 IGSGQFGLVHLGY-WLNKDKVAIKTIKEGSM----------------SEDDFIEEAEVMM 77
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV---VVRQM 220
L+ H +V+ Y + + + E E G L D + ++ E + V M
Sbjct: 78 KLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGM 136
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 278
+ C ++HRD+ N L E+ +K +DFG++ F+ ++ G+ +
Sbjct: 137 AYLEEAC----VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPV 188
Query: 279 -YVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 324
+ +PEV + +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 189 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 89/224 (39%), Gaps = 30/224 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY I LG G FG D A G KI +N R + ++ ++ I +D
Sbjct: 20 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKD-- 77
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
+E K L L + F ++ IA EL G + + Y +
Sbjct: 78 KENKFLCVLMS--------DWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHM 128
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLF------------KSAKE----DSSLKATDFGL 260
Q+ H + L H D+KPEN LF KS +E ++S++ DFG
Sbjct: 129 AYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 188
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITY 303
+ F + IV + +Y PEV L+ DVWSIG I +
Sbjct: 189 ATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILF 230
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 467
S L +E +A+ + FD D D G IS++E+ + + L + + I++ +D +
Sbjct: 9 SYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVM-RMLGQTPTKEELDAIIEEVDEDGS 67
Query: 468 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-- 525
G +DF EF+ + V Q++E K F FD + DG+I EEL G
Sbjct: 68 GTIDFEEFL--VMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEH 125
Query: 526 ----SIDPLLEEADIDKDGRISLSEFRRLLR 552
I+ L+++ D + DGRI EF +++
Sbjct: 126 VTDEEIESLMKDGDKNNDGRIDFDEFLKMME 156
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 120/284 (42%), Gaps = 44/284 (15%)
Query: 103 LLGHGQFGYTYVATDKANGDRV--AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVK 160
++G G FG A K +G R+ A+K++++ S D + D E++
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE------YASKDDHR--------DFAGELE 67
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV--- 217
+L L H N++ A E Y+Y+A+E G LLD + + SR E D A +
Sbjct: 68 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANS 124
Query: 218 -------RQMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
+Q+L AA+ +HRD+ N L E+ K DFGLS
Sbjct: 125 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL---VGENYVAKIADFGLSRG 181
Query: 264 IKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 321
+ K ++A E L SDVWS GV+ + I+ G P+ T ++
Sbjct: 182 QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY 241
Query: 322 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365
+++ + +R + + + D +++ + P R + AQ L
Sbjct: 242 EKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 89/224 (39%), Gaps = 30/224 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY I LG G FG D A G KI +N R + ++ ++ I +D
Sbjct: 29 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKD-- 86
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
+E K L L + F ++ IA EL G + + Y +
Sbjct: 87 KENKFLCVLMS--------DWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHM 137
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLF------------KSAKE----DSSLKATDFGL 260
Q+ H + L H D+KPEN LF KS +E ++S++ DFG
Sbjct: 138 AYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 197
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITY 303
+ F + IV + +Y PEV L+ DVWSIG I +
Sbjct: 198 ATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILF 239
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 120/284 (42%), Gaps = 44/284 (15%)
Query: 103 LLGHGQFGYTYVATDKANGDRV--AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVK 160
++G G FG A K +G R+ A+K++++ S D + D E++
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE------YASKDDHR--------DFAGELE 77
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV--- 217
+L L H N++ A E Y+Y+A+E G LLD + + SR E D A +
Sbjct: 78 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANS 134
Query: 218 -------RQMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
+Q+L AA+ +HRD+ N L E+ K DFGLS
Sbjct: 135 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL---VGENYVAKIADFGLSRG 191
Query: 264 IKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 321
+ K ++A E L SDVWS GV+ + I+ G P+ T ++
Sbjct: 192 QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY 251
Query: 322 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365
+++ + +R + + + D +++ + P R + AQ L
Sbjct: 252 EKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 128/333 (38%), Gaps = 80/333 (24%)
Query: 101 GKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
G +G G +G+ Y A K D A+K+IE I + RE
Sbjct: 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSAC-----------------RE 68
Query: 159 VKILQALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV- 215
+ +L+ L H NV+ F D V++ + E +L I + S+ +K +
Sbjct: 69 IALLRELK-HPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLP 126
Query: 216 ------VVRQMLRVAAECHLHGLVHRDMKPENFL-FKSAKEDSSLKATDFGLSDF----I 264
++ Q+L H + ++HRD+KP N L E +K D G + +
Sbjct: 127 RGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL 186
Query: 265 KPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED---- 318
KP +V + +Y APE+L R D+W+IG I LL F + ED
Sbjct: 187 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS 246
Query: 319 ---------GIFK----------EVLRNKP-------DFRRKPWPSIS------------ 340
IF E ++ P DFRR + + S
Sbjct: 247 NPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKP 306
Query: 341 -NSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ A ++KLL DP R+T+ QA+ P+ E
Sbjct: 307 DSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLE 339
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 83/153 (54%), Gaps = 12/153 (7%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E+ ++R+ FD D D +G+I +E++ A+ + L ++ K+ + +++ ID + G
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAM-RALGFEPKKEEIKKMIADIDKDGSGT 60
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---- 525
+DF EF+ + ++ E DS + ++ AF FD D G I+ + L+ G
Sbjct: 61 IDFEEFLQ--MMTAKMGERDSREEIMK---AFRLFDDDETGKISFKNLKRVAKELGENMT 115
Query: 526 --SIDPLLEEADIDKDGRISLSEFRRLLRTASI 556
+ +++EAD D DG ++ EF R+++ S+
Sbjct: 116 DEELQEMIDEADRDGDGEVNEEEFFRIMKKTSL 148
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 109/269 (40%), Gaps = 41/269 (15%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG+GQFG ++ T N +VA+K ++ ++ E E +I
Sbjct: 15 KRLGNGQFGEVWMGTWNGN-TKVAIKTLKPGT----------------MSPESFLEEAQI 57
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
++ L H+ +V+ Y ++ +YI E G LLD + + + + Q+
Sbjct: 58 MKKLK-HDKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVA 115
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A +HRD++ N L + K DFGL+ I + G KF
Sbjct: 116 AGMAYIERMNYIHRDLRSANILVGNG---LICKIADFGLARLIEDNEXTARQGAKF---- 168
Query: 275 GSAYYVAPE-VLKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T ++ GR P+ + ++V R
Sbjct: 169 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG----Y 223
Query: 333 RKPWPS-ISNSAKDFVKKLLVKDPRARLT 360
R P P S + + KDP R T
Sbjct: 224 RMPCPQDCPISLHELMIHCWKKDPEERPT 252
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 89/224 (39%), Gaps = 30/224 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY I LG G FG D A G KI +N R + ++ ++ I +D
Sbjct: 52 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKD-- 109
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
+E K L L + F ++ IA EL G + + Y +
Sbjct: 110 KENKFLCVLMS--------DWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHM 160
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLF------------KSAKE----DSSLKATDFGL 260
Q+ H + L H D+KPEN LF KS +E ++S++ DFG
Sbjct: 161 AYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 220
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITY 303
+ F + IV + +Y PEV L+ DVWSIG I +
Sbjct: 221 ATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILF 262
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G GQFG ++ N D+VA+K I + + + ED E +++
Sbjct: 15 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAM----------------SEEDFIEEAEVMM 57
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L+ H +V+ Y + + + E E G L D + ++ E + + +
Sbjct: 58 KLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEG 115
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YV 280
A ++HRD+ N L E+ +K +DFG++ F+ ++ G+ + +
Sbjct: 116 MAYLEEASVIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWA 171
Query: 281 APEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 324
+PEV + +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 172 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T K LG GQFG + D VA+K I++ + + ++ E
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----------------SEDEFIEE 53
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
K++ L+ HE +V+ Y ++I E G LL+ L + R+ + + +
Sbjct: 54 AKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMCK 111
Query: 219 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 278
+ +HRD+ N L + +K +DFGLS ++ ++ VGS +
Sbjct: 112 DVCEAMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKF 167
Query: 279 ---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ PEVL K +SD+W+ GV+ + I G+ P+
Sbjct: 168 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 206
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 40/232 (17%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG ++A E++K+L+ V + LK A +D +RE ++L
Sbjct: 49 LGEGAFGKVFLA-------ECHNLLPEQDKMLVAV---KALKEASESARQDFQREAELLT 98
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVV----- 216
L H+++V+F+ + + + E G+L +R L D++ V
Sbjct: 99 MLQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 217 VRQMLRVAAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLS------DF 263
+ Q+L VA++ +L GL VHRD+ N L + +K DFG+S D+
Sbjct: 157 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVKIGDFGMSRDIYSTDY 213
Query: 264 IKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 313
+ G + + ++ PE +L RK ESDVWS GV+ + I G++P++
Sbjct: 214 YRVGGRTMLPI---RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T K LG GQFG + D VA+K I++ + + ++ E
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----------------SEDEFIEE 49
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
K++ L+ HE +V+ Y ++I E G LL+ L + R+ + + +
Sbjct: 50 AKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMCK 107
Query: 219 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 278
+ +HRD+ N L + +K +DFGLS ++ ++ VGS +
Sbjct: 108 DVCEAMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKF 163
Query: 279 ---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ PEVL K +SD+W+ GV+ + I G+ P+
Sbjct: 164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 202
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T K LG GQFG + D VA+K I++ + + ++ E
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----------------SEDEFIEE 54
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
K++ L+ HE +V+ Y ++I E G LL+ L + R+ + + +
Sbjct: 55 AKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMCK 112
Query: 219 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 278
+ +HRD+ N L + +K +DFGLS ++ ++ VGS +
Sbjct: 113 DVCEAMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKF 168
Query: 279 ---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ PEVL K +SD+W+ GV+ + I G+ P+
Sbjct: 169 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T K LG GQFG + D VA+K I++ + + ++ E
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----------------SEDEFIEE 69
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
K++ L+ HE +V+ Y ++I E G LL+ L + R+ + + +
Sbjct: 70 AKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMCK 127
Query: 219 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 278
+ +HRD+ N L + +K +DFGLS ++ ++ VGS +
Sbjct: 128 DVCEAMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKF 183
Query: 279 ---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ PEVL K +SD+W+ GV+ + I G+ P+
Sbjct: 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 52/238 (21%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG ++A E++K+L+ V + LK A +D +RE ++L
Sbjct: 26 LGEGAFGKVFLAECHN-------LLPEQDKMLVAV---KALKEASESARQDFQREAELLT 75
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVV----- 216
L H+++V+F+ + + + E G+L +R L D++ V
Sbjct: 76 MLQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLG 133
Query: 217 VRQMLRVAAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ Q+L VA++ +L GL VHRD+ N L + +K DFG+S
Sbjct: 134 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVKIGDFGMS-------- 182
Query: 270 FQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 313
+DI + YY + PE +L RK ESDVWS GV+ + I G++P++
Sbjct: 183 -RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 239
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 52/238 (21%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG ++A E++K+L+ V + LK A +D +RE ++L
Sbjct: 20 LGEGAFGKVFLAECHN-------LLPEQDKMLVAV---KALKEASESARQDFQREAELLT 69
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVV----- 216
L H+++V+F+ + + + E G+L +R L D++ V
Sbjct: 70 MLQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLG 127
Query: 217 VRQMLRVAAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ Q+L VA++ +L GL VHRD+ N L + +K DFG+S
Sbjct: 128 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVKIGDFGMS-------- 176
Query: 270 FQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 313
+DI + YY + PE +L RK ESDVWS GV+ + I G++P++
Sbjct: 177 -RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 233
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 32/213 (15%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG GQFG ++AT + +VAVK ++ + +VE E +
Sbjct: 188 KKLGAGQFGEVWMATYNKH-TKVAVKTMKPGSM----------------SVEAFLAEANV 230
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
++ L H+ +VK + + +YI E G LLD + + + S+ Q+
Sbjct: 231 MKTLQ-HDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA 288
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
A +HRD++ N L ++ K DFGL+ + G KF + A
Sbjct: 289 EGMAFIEQRNYIHRDLRAANILVSASL---VCKIADFGLA---RVGAKF-----PIKWTA 337
Query: 282 PEVLKRKSGP-ESDVWSIGVITY-ILLCGRRPF 312
PE + S +SDVWS G++ I+ GR P+
Sbjct: 338 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 370
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T K LG GQFG + D VA+K I++ + + ++ E
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----------------SEDEFIEE 60
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
K++ L+ HE +V+ Y ++I E G LL+ L + R+ + + +
Sbjct: 61 AKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMCK 118
Query: 219 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 278
+ +HRD+ N L + +K +DFGLS ++ ++ VGS +
Sbjct: 119 DVCEAMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKF 174
Query: 279 ---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ PEVL K +SD+W+ GV+ + I G+ P+
Sbjct: 175 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 119/335 (35%), Gaps = 80/335 (23%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY I LG G FG D G R KI KN + E +
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---------------VDRYCEAAR 59
Query: 157 REVKILQALAGHE-----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
E+++L+ L + V+ FE ++ I EL G D I +
Sbjct: 60 SEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLD 118
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF-----------KSAKEDSSL-----KA 255
+ Q+ + H + L H D+KPEN LF K +++ +L K
Sbjct: 119 HIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKV 178
Query: 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIG--VITYILLCGRRPF 312
DFG + + + +V + +Y APEV L DVWSIG +I Y L P
Sbjct: 179 VDFGSATY--DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPT 236
Query: 313 WDKTED-GIFKEVLRNKPDFR-------------RKPWPSISNSAK-------------- 344
D E + + +L P R W S++ +
Sbjct: 237 HDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFML 296
Query: 345 ----------DFVKKLLVKDPRARLTAAQALSHPW 369
D ++K+L DP R+T +AL HP+
Sbjct: 297 SQDVEHERLFDLIQKMLEYDPAKRITLREALKHPF 331
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 82/147 (55%), Gaps = 12/147 (8%)
Query: 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 471
+E+ ++R+ FD D D G+I ++E++ A+ + L ++ K+ + +++ ID G ++
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAM-RALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 472 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 525
F +F+ T+ ++ E D+++ L+ AF+ FD D G I+ + L+ G
Sbjct: 61 FGDFL--TVMTQKMSEKDTKEEILK---AFKLFDDDETGKISFKNLKRVAKELGENLTDE 115
Query: 526 SIDPLLEEADIDKDGRISLSEFRRLLR 552
+ +++EAD D DG +S EF R+++
Sbjct: 116 ELQEMIDEADRDGDGEVSEQEFLRIMK 142
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 91/224 (40%), Gaps = 35/224 (15%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG GQFG ++ N +VAVK ++ + +V+ E +
Sbjct: 19 KRLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM----------------SVQAFLEEANL 61
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
++ L H+ +V+ Y + +YI E G LLD + + + + Q+
Sbjct: 62 MKTLQ-HDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA 120
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A +HRD++ N L E K DFGL+ I + G KF
Sbjct: 121 EGMAYIERKNYIHRDLRAANVL---VSESLMCKIADFGLARVIEDNEYTAREGAKF---- 173
Query: 275 GSAYYVAPEVLKRKSGP-ESDVWSIGVITY-ILLCGRRPFWDKT 316
+ APE + +SDVWS G++ Y I+ G+ P+ +T
Sbjct: 174 -PIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRT 216
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 120/284 (42%), Gaps = 44/284 (15%)
Query: 103 LLGHGQFGYTYVATDKANGDRV--AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVK 160
++G G FG A K +G R+ A+K++++ S D + D E++
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE------YASKDDHR--------DFAGELE 74
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV--- 217
+L L H N++ A E Y+Y+A+E G LLD + + SR E D A +
Sbjct: 75 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANS 131
Query: 218 -------RQMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
+Q+L AA+ +HR++ N L E+ K DFGLS
Sbjct: 132 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNIL---VGENYVAKIADFGLSRG 188
Query: 264 IKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 321
+ K ++A E L SDVWS GV+ + I+ G P+ T ++
Sbjct: 189 QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY 248
Query: 322 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365
+++ + +R + + + D +++ + P R + AQ L
Sbjct: 249 EKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 91/224 (40%), Gaps = 35/224 (15%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG GQFG ++ N +VAVK ++ + +V+ E +
Sbjct: 18 KKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM----------------SVQAFLEEANL 60
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
++ L H+ +V+ Y + +YI E G LLD + + + + Q+
Sbjct: 61 MKTLQ-HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA 119
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A +HRD++ N L E K DFGL+ I + G KF
Sbjct: 120 EGMAYIERKNYIHRDLRAANVL---VSESLMCKIADFGLARVIEDNEYTAREGAKF---- 172
Query: 275 GSAYYVAPEVLKRKSGP-ESDVWSIGVITY-ILLCGRRPFWDKT 316
+ APE + +S+VWS G++ Y I+ G+ P+ +T
Sbjct: 173 -PIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRT 215
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 40/227 (17%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
I + +G G FG + A + +G VAVK ++ QD V + RE
Sbjct: 40 NIKEKIGAGSFGTVHRA--EWHGSDVAVK----------ILMEQDFHAE---RVNEFLRE 84
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
V I++ L H N+V F A + I E G L R+L K +R + R
Sbjct: 85 VAIMKRLR-HPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDE-----R 137
Query: 219 QMLRVAAEC-----HLHG----LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ L +A + +LH +VHRD+K N L + ++K DFGLS
Sbjct: 138 RRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLL---VDKKYTVKVCDFGLSRL--KASX 192
Query: 270 F---QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPF 312
F + G+ ++APEVL+ S +SDV+S GVI + L ++P+
Sbjct: 193 FLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T K LG GQFG + D VA+K I++ + + ++ E
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----------------SEDEFIEE 69
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
K++ L+ HE +V+ Y ++I E G LL+ L + R+ + + +
Sbjct: 70 AKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMCK 127
Query: 219 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 278
+ +HRD+ N L + +K +DFGLS ++ ++ VGS +
Sbjct: 128 DVCEAMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLDDEETSS-VGSKF 183
Query: 279 ---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ PEVL K +SD+W+ GV+ + I G+ P+
Sbjct: 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 36/220 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG GQFG ++AT + +VAVK ++ + +VE E +
Sbjct: 194 KKLGAGQFGEVWMATYNKH-TKVAVKTMKPGSM----------------SVEAFLAEANV 236
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
++ L H+ +VK + + +YI E G LLD + + + S+ Q+
Sbjct: 237 MKTLQ-HDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA 294
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A +HRD++ N L ++ K DFGL+ I + G KF
Sbjct: 295 EGMAFIEQRNYIHRDLRAANILVSASL---VCKIADFGLARVIEDNEYTAREGAKF---- 347
Query: 275 GSAYYVAPEVLKRKSGP-ESDVWSIGVITY-ILLCGRRPF 312
+ APE + S +SDVWS G++ I+ GR P+
Sbjct: 348 -PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 386
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 35/216 (16%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
LG G FG Y G+ VAVKK++ + + D +RE+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EEHLRDFEREI 62
Query: 160 KILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+IL++L H+N+VK+ Y+A + + + ME G L D L K R
Sbjct: 63 EILKSLQ-HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQ 118
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV- 274
Q+ + +HRD+ N L + ++ +K DFGL+ + K+F +
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDKEFFKVKE 175
Query: 275 ---GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 306
++ APE L + K SDVWS GV+ Y L
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 36/220 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG GQFG ++AT + +VAVK ++ + +VE E +
Sbjct: 21 KKLGAGQFGEVWMATYNKH-TKVAVKTMKPGSM----------------SVEAFLAEANV 63
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
++ L H+ +VK + + +YI E G LLD + + + S+ Q+
Sbjct: 64 MKTLQ-HDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA 121
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A +HRD++ N L ++ K DFGL+ I + G KF
Sbjct: 122 EGMAFIEQRNYIHRDLRAANILVSAS---LVCKIADFGLARVIEDNEYTAREGAKF---- 174
Query: 275 GSAYYVAPEVLKRKSGP-ESDVWSIGVITY-ILLCGRRPF 312
+ APE + S +SDVWS G++ I+ GR P+
Sbjct: 175 -PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 213
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG GQFG ++ NG +VAVK +++ + + + E ++
Sbjct: 29 LGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----------------SPDAFLAEANLM 70
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ L H+ +V+ Y + +YI E E G L+D + + T + Q+
Sbjct: 71 KQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 128
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVG 275
A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 129 GMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF----- 180
Query: 276 SAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KP 329
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R +P
Sbjct: 181 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 240
Query: 330 D 330
D
Sbjct: 241 D 241
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 36/236 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
R +GK LG G FG + D D+ A + K+L + + + ++
Sbjct: 28 RLNLGKPLGRGAFGQV-IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALM-------- 78
Query: 157 REVKILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
E+KIL + H NVV A + + + +E C+ G L + +K++ KD
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK 138
Query: 216 -------VVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS---- 261
++ +VA +HRD+ N L E + +K DFGL+
Sbjct: 139 DFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKIXDFGLARDIY 195
Query: 262 ---DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 312
D+++ G D ++APE + R +SDVWS GV+ + I G P+
Sbjct: 196 KDPDYVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 94/236 (39%), Gaps = 39/236 (16%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
GK LG G FG AT G AV K+ +++ + D K E + E+
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK--MLKSTAHADEK-------EALMSEL 100
Query: 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------D 205
KI+ L HEN+V A V + E C G+LL+ + K+ +
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPE 160
Query: 206 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL----- 260
+ + +D Q+ + A +HRD+ N L + K DFGL
Sbjct: 161 EQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIM 217
Query: 261 --SDFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 312
S++I G + ++APE + +SDVWS G++ + I G P+
Sbjct: 218 NDSNYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG GQFG ++ NG +VAVK +++ + + + E ++
Sbjct: 27 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----------------SPDAFLAEANLM 68
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ L H+ +V+ Y + +YI E E G L+D + + T + Q+
Sbjct: 69 KQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVG 275
A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 127 GMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF----- 178
Query: 276 SAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KP 329
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R +P
Sbjct: 179 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 238
Query: 330 D 330
D
Sbjct: 239 D 239
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 102/247 (41%), Gaps = 31/247 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ +GK +G G FG + + + VA+K + +K P +
Sbjct: 6 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK-------------LEPIKSRAP----QLHL 48
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E + + L+ E V + Y Y + +EL G L+ + D +T K ++
Sbjct: 49 EYRFYKQLSATEGVPQVYYFGPXGKYNAMVLELL--GPSLEDLFDLCDRTFTLKTVLMIA 106
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFIKPGKK----- 269
Q++ H L++RD+KPENFL K ++ DFGL+ ++I P K
Sbjct: 107 IQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPY 166
Query: 270 --FQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326
+ + G+A Y++ L ++ D+ ++G + L G P W + KE +
Sbjct: 167 REHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP-WQGLKADTLKERYQ 225
Query: 327 NKPDFRR 333
D +R
Sbjct: 226 KIGDTKR 232
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 118/335 (35%), Gaps = 80/335 (23%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY I LG G FG D G R KI KN + E +
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---------------VDRYCEAAR 59
Query: 157 REVKILQALAGHE-----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
E+++L+ L + V+ FE ++ I EL G D I +
Sbjct: 60 SEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLD 118
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF-----------KSAKEDSSL-----KA 255
+ Q+ + H + L H D+KPEN LF K +++ +L K
Sbjct: 119 HIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKV 178
Query: 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIG--VITYILLCGRRPF 312
DFG + + + +V +Y APEV L DVWSIG +I Y L P
Sbjct: 179 VDFGSATY--DDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPT 236
Query: 313 WDKTED-GIFKEVLRNKPDFR-------------RKPWPSISNSAK-------------- 344
D E + + +L P R W S++ +
Sbjct: 237 HDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFML 296
Query: 345 ----------DFVKKLLVKDPRARLTAAQALSHPW 369
D ++K+L DP R+T +AL HP+
Sbjct: 297 SQDVEHERLFDLIQKMLEYDPAKRITLREALKHPF 331
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG GQFG ++ NG +VAVK +++ + + + E ++
Sbjct: 31 LGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----------------SPDAFLAEANLM 72
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ L H+ +V+ Y + +YI E E G L+D + + T + Q+
Sbjct: 73 KQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 130
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVG 275
A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 131 GMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF----- 182
Query: 276 SAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KP 329
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R +P
Sbjct: 183 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 242
Query: 330 D 330
D
Sbjct: 243 D 243
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG GQFG ++ NG +VAVK +++ + + + E ++
Sbjct: 30 LGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----------------SPDAFLAEANLM 71
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ L H+ +V+ Y + +YI E E G L+D + + T + Q+
Sbjct: 72 KQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 129
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVG 275
A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 130 GMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF----- 181
Query: 276 SAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KP 329
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R +P
Sbjct: 182 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 241
Query: 330 D 330
D
Sbjct: 242 D 242
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 108/281 (38%), Gaps = 41/281 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G +G +G AVK+I V+ Q+ K +L ++ I
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRAT------VNSQEQKRLL--------XDLDISX 87
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
V FY A + V+I EL D L K + +K + + ++
Sbjct: 88 RTVDCPFTVTFYGALFREGDVWICXEL------XDTSLDKFYKQVIDKGQTIPEDILGKI 141
Query: 224 AAEC-----HLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
A HLH ++HRD+KP N L + + +K DFG+S ++ G
Sbjct: 142 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ---VKXCDFGISGYLVDDVAKDIDAG 198
Query: 276 SAYYVAPEVL-----KRKSGPESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNK 328
Y APE + ++ +SD+WS+G+ L R P+ W + + V
Sbjct: 199 CKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPS 258
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
P P S DF + L K+ + R T + HP+
Sbjct: 259 PQL---PADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPF 296
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG GQFG ++ NG +VAVK +++ + + + E ++
Sbjct: 27 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----------------SPDAFLAEANLM 68
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ L H+ +V+ Y + +YI E E G L+D + + T + Q+
Sbjct: 69 KQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVG 275
A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 127 GMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF----- 178
Query: 276 SAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KP 329
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R +P
Sbjct: 179 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 238
Query: 330 D 330
D
Sbjct: 239 D 239
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG GQFG ++ NG +VAVK +++ + + + E ++
Sbjct: 26 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----------------SPDAFLAEANLM 67
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ L H+ +V+ Y + +YI E E G L+D + + T + Q+
Sbjct: 68 KQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 125
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVG 275
A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 126 GMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF----- 177
Query: 276 SAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KP 329
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R +P
Sbjct: 178 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 237
Query: 330 D 330
D
Sbjct: 238 D 238
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG GQFG ++ NG +VAVK +++ + + + E ++
Sbjct: 21 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----------------SPDAFLAEANLM 62
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ L H+ +V+ Y + +YI E E G L+D + + T + Q+
Sbjct: 63 KQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVG 275
A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 121 GMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF----- 172
Query: 276 SAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KP 329
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R +P
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 232
Query: 330 D 330
D
Sbjct: 233 D 233
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG GQFG ++ NG +VAVK +++ + + + E ++
Sbjct: 23 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----------------SPDAFLAEANLM 64
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ L H+ +V+ Y + +YI E E G L+D + + T + Q+
Sbjct: 65 KQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 122
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVG 275
A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 123 GMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF----- 174
Query: 276 SAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KP 329
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R +P
Sbjct: 175 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 234
Query: 330 D 330
D
Sbjct: 235 D 235
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG GQFG ++ NG +VAVK +++ + + + E ++
Sbjct: 22 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----------------SPDAFLAEANLM 63
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ L H+ +V+ Y + +YI E E G L+D + + T + Q+
Sbjct: 64 KQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 121
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVG 275
A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 122 GMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF----- 173
Query: 276 SAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KP 329
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R +P
Sbjct: 174 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 233
Query: 330 D 330
D
Sbjct: 234 D 234
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG GQFG ++ NG +VAVK +++ + + + E ++
Sbjct: 21 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----------------SPDAFLAEANLM 62
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ L H+ +V+ Y + +YI E E G L+D + + T + Q+
Sbjct: 63 KQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVG 275
A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 121 GMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF----- 172
Query: 276 SAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KP 329
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R +P
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 232
Query: 330 D 330
D
Sbjct: 233 D 233
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G FG + A + +G VAVK ++ QD V + REV I++
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVK----------ILMEQDFHAE---RVNEFLREVAIMK 89
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+V F A + I E G L R+L K +R + R+ L +
Sbjct: 90 RLR-HPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDE-----RRRLSM 142
Query: 224 AAEC-----HLHG----LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---Q 271
A + +LH +VHR++K N L + ++K DFGLS F +
Sbjct: 143 AYDVAKGMNYLHNRNPPIVHRNLKSPNLL---VDKKYTVKVCDFGLSRL--KASTFLSSK 197
Query: 272 DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPF 312
G+ ++APEVL+ S +SDV+S GVI + L ++P+
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 95/243 (39%), Gaps = 46/243 (18%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
GK LG G FG AT G AV K+ +++ + D K E + E+
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK--MLKSTAHADEK-------EALMSEL 85
Query: 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI------------------- 200
KI+ L HEN+V A V + E C G+LL+ +
Sbjct: 86 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPE 145
Query: 201 -LAKKDSRYTE-KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
L K+D R E +D Q+ + A +HRD+ N L + K DF
Sbjct: 146 GLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDF 202
Query: 259 GL-------SDFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGR 309
GL S++I G + ++APE + +SDVWS G++ + I G
Sbjct: 203 GLARDIMNDSNYIVKGNARLPV----KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 258
Query: 310 RPF 312
P+
Sbjct: 259 NPY 261
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 103/245 (42%), Gaps = 45/245 (18%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+F R R +GK LG G FG + D D+ A + K+L + + + ++
Sbjct: 23 EFPRDRLNLGKPLGRGAFGQV-IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALM--- 78
Query: 152 VEDVKREVKILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
E+KIL + H NVV A + + + +E C+ G L + +K++
Sbjct: 79 -----SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 211 KD--------------AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256
KD + V + M +A+ +HRD+ N L E + +K
Sbjct: 134 KDLYKDFLTLEHLICYSFQVAKGMEFLASR----KXIHRDLAARNILLS---EKNVVKIC 186
Query: 257 DFGLS-------DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLC 307
DFGL+ D+++ G D ++APE + R +SDVWS GV+ + I
Sbjct: 187 DFGLARDIYKDPDYVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 242
Query: 308 GRRPF 312
G P+
Sbjct: 243 GASPY 247
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG GQFG ++ NG +VAVK +++ + + + E ++
Sbjct: 21 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----------------SPDAFLAEANLM 62
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ L H+ +V+ Y + +YI E E G L+D + + T + Q+
Sbjct: 63 KQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVG 275
A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 121 GMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF----- 172
Query: 276 SAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KP 329
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R +P
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 232
Query: 330 D 330
D
Sbjct: 233 D 233
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG GQFG ++ NG +VAVK +++ + + + E ++
Sbjct: 16 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----------------SPDAFLAEANLM 57
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ L H+ +V+ Y + +YI E E G L+D + + T + Q+
Sbjct: 58 KQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 115
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVG 275
A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 116 GMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF----- 167
Query: 276 SAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KP 329
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R +P
Sbjct: 168 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 227
Query: 330 D 330
D
Sbjct: 228 D 228
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 38/242 (15%)
Query: 78 GVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT----YVATDKANGDRVAVKKIEKNK 133
G++P G ++ +R + LG G FG Y G+ VAVKK++ +
Sbjct: 13 GLVPRGSHNMTQFE---ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS- 68
Query: 134 ILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF----YNAFEDDNYVYIAME 189
+ + L+ D +RE++IL++L H+N+VK+ Y+A + + + ME
Sbjct: 69 ------TEEHLR--------DFEREIEILKSLQ-HDNIVKYKGVCYSAGRRN--LKLIME 111
Query: 190 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249
G L D L K R Q+ + +HRD+ N L ++
Sbjct: 112 YLPYGSLRD-YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN--- 167
Query: 250 DSSLKATDFGLSDFIKPGKKFQDIV----GSAYYVAPEVL-KRKSGPESDVWSIGVITYI 304
++ +K DFGL+ + K+ + ++ APE L + K SDVWS GV+ Y
Sbjct: 168 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 227
Query: 305 LL 306
L
Sbjct: 228 LF 229
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 28/219 (12%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T K LG GQFG + D VA+K I++ + + ++ E
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----------------SEDEFIEE 54
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
K++ L+ HE +V+ Y ++I E G LL+ L + R+ + + +
Sbjct: 55 AKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMCK 112
Query: 219 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 278
+ +HRD+ N L + +K +DFGLS ++ ++ GS +
Sbjct: 113 DVCEAMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLD-DEYTSSRGSKF 168
Query: 279 ---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ PEVL K +SD+W+ GV+ + I G+ P+
Sbjct: 169 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 38/242 (15%)
Query: 78 GVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT----YVATDKANGDRVAVKKIEKNK 133
G++P G ++ +R + LG G FG Y G+ VAVKK++ +
Sbjct: 13 GLVPRGSHNMTQFE---ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS- 68
Query: 134 ILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF----YNAFEDDNYVYIAME 189
+ + L+ D +RE++IL++L H+N+VK+ Y+A + + + ME
Sbjct: 69 ------TEEHLR--------DFEREIEILKSLQ-HDNIVKYKGVCYSAGRRN--LKLIME 111
Query: 190 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249
G L D L K R Q+ + +HRD+ N L ++
Sbjct: 112 YLPYGSLRD-YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN--- 167
Query: 250 DSSLKATDFGLSDFIKPGKKFQDIV----GSAYYVAPEVL-KRKSGPESDVWSIGVITYI 304
++ +K DFGL+ + K+ + ++ APE L + K SDVWS GV+ Y
Sbjct: 168 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 227
Query: 305 LL 306
L
Sbjct: 228 LF 229
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
LG G FG Y G+ VAVKK++ + + + L+ D +RE+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-------TEEHLR--------DFEREI 61
Query: 160 KILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+IL++L H+N+VK+ Y+A + + + ME G L D L K R
Sbjct: 62 EILKSLQ-HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQ 117
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV- 274
Q+ + +HRD+ N L ++ ++ +K DFGL+ + K+ +
Sbjct: 118 YTSQICKGMEYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKE 174
Query: 275 ---GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 306
++ APE L + K SDVWS GV+ Y L
Sbjct: 175 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
LG G FG Y G+ VAVKK++ + + + L+ D +RE+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-------TEEHLR--------DFEREI 62
Query: 160 KILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+IL++L H+N+VK+ Y+A + + + ME G L D L K R
Sbjct: 63 EILKSLQ-HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQ 118
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV- 274
Q+ + +HRD+ N L ++ ++ +K DFGL+ + K+ +
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 275 ---GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 306
++ APE L + K SDVWS GV+ Y L
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
LG G FG Y G+ VAVKK++ + + + L+ D +RE+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-------TEEHLR--------DFEREI 65
Query: 160 KILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+IL++L H+N+VK+ Y+A + + + ME G L D L K R
Sbjct: 66 EILKSLQ-HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQ 121
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV- 274
Q+ + +HRD+ N L ++ ++ +K DFGL+ + K+ +
Sbjct: 122 YTSQICKGMEYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 275 ---GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 306
++ APE L + K SDVWS GV+ Y L
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
LG G FG Y G+ VAVKK++ + + + L+ D +RE+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-------TEEHLR--------DFEREI 67
Query: 160 KILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+IL++L H+N+VK+ Y+A + + + ME G L D L K R
Sbjct: 68 EILKSLQ-HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQ 123
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV- 274
Q+ + +HRD+ N L ++ ++ +K DFGL+ + K+ +
Sbjct: 124 YTSQICKGMEYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKE 180
Query: 275 ---GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 306
++ APE L + K SDVWS GV+ Y L
Sbjct: 181 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 216
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
LG G FG Y G+ VAVKK++ + + + L+ D +RE+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-------TEEHLR--------DFEREI 66
Query: 160 KILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+IL++L H+N+VK+ Y+A + + + ME G L D L K R
Sbjct: 67 EILKSLQ-HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQ 122
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV- 274
Q+ + +HRD+ N L ++ ++ +K DFGL+ + K+ +
Sbjct: 123 YTSQICKGMEYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKE 179
Query: 275 ---GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 306
++ APE L + K SDVWS GV+ Y L
Sbjct: 180 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
LG G FG Y G+ VAVKK++ + + + L+ D +RE+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-------TEEHLR--------DFEREI 60
Query: 160 KILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+IL++L H+N+VK+ Y+A + + + ME G L D L K R
Sbjct: 61 EILKSLQ-HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQ 116
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV- 274
Q+ + +HRD+ N L ++ ++ +K DFGL+ + K+ +
Sbjct: 117 YTSQICKGMEYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKE 173
Query: 275 ---GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 306
++ APE L + K SDVWS GV+ Y L
Sbjct: 174 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 209
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 35/216 (16%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
LG G FG Y G+ VAVKK++ + + + L+ D +RE+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-------TEEHLR--------DFEREI 63
Query: 160 KILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+IL++L H+N+VK+ Y+A + + + ME G L D L K R
Sbjct: 64 EILKSLQ-HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQ 119
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV- 274
Q+ + +HR++ N L ++ ++ +K DFGL+ + K++ +
Sbjct: 120 YTSQICKGMEYLGTKRYIHRNLATRNILVEN---ENRVKIGDFGLTKVLPQDKEYYKVKE 176
Query: 275 ---GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 306
++ APE L + K SDVWS GV+ Y L
Sbjct: 177 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
LG G FG Y G+ VAVKK++ + + + L+ D +RE+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-------TEEHLR--------DFEREI 62
Query: 160 KILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+IL++L H+N+VK+ Y+A + + + ME G L D L K R
Sbjct: 63 EILKSLQ-HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQ 118
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV- 274
Q+ + +HRD+ N L ++ ++ +K DFGL+ + K+ +
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 275 ---GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 306
++ APE L + K SDVWS GV+ Y L
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 41/245 (16%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+F R R +GK LG G FG + D D+ A + K+L + + + ++
Sbjct: 25 EFPRDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM--- 80
Query: 152 VEDVKREVKILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
E+KIL + H NVV A + + + +E C+ G L + +K++
Sbjct: 81 -----SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 135
Query: 211 KDAAV-----------VVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKAT 256
K+A ++ +VA +HRD+ N L E + +K
Sbjct: 136 KEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKIC 192
Query: 257 DFGLS-------DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLC 307
DFGL+ D+++ G D ++APE + R +SDVWS GV+ + I
Sbjct: 193 DFGLARDIYKDPDYVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 248
Query: 308 GRRPF 312
G P+
Sbjct: 249 GASPY 253
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 92/216 (42%), Gaps = 35/216 (16%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
LG G FG Y G+ VAVKK++ + + D +RE+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EEHLRDFEREI 69
Query: 160 KILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+IL++L H+N+VK+ Y+A + + + ME G L D L K R
Sbjct: 70 EILKSLQ-HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQ 125
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV- 274
Q+ + +HRD+ N L ++ ++ +K DFGL+ + K+ +
Sbjct: 126 YTSQICKGMEYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKE 182
Query: 275 ---GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 306
++ APE L + K SDVWS GV+ Y L
Sbjct: 183 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
LG G FG Y G+ VAVKK++ + + + L+ D +RE+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-------TEEHLR--------DFEREI 93
Query: 160 KILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+IL++L H+N+VK+ Y+A + + + ME G L D L K R
Sbjct: 94 EILKSLQ-HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQ 149
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV- 274
Q+ + +HRD+ N L ++ ++ +K DFGL+ + K+ +
Sbjct: 150 YTSQICKGMEYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKE 206
Query: 275 ---GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 306
++ APE L + K SDVWS GV+ Y L
Sbjct: 207 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 242
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG GQFG ++ NG +VAVK +++ + + + E ++
Sbjct: 17 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----------------SPDAFLAEANLM 58
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ L H+ +V+ Y + +YI E E G L+D + + T + Q+
Sbjct: 59 KQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVG 275
A +HR+++ N L + S K DFGL+ I + G KF
Sbjct: 117 GMAFIEERNYIHRNLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF----- 168
Query: 276 SAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KP 329
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R +P
Sbjct: 169 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 228
Query: 330 D 330
D
Sbjct: 229 D 229
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
LG G FG Y G+ VAVKK++ + + + L+ D +RE+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-------TEEHLR--------DFEREI 68
Query: 160 KILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+IL++L H+N+VK+ Y+A + + + ME G L D L K R
Sbjct: 69 EILKSLQ-HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQ 124
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV- 274
Q+ + +HRD+ N L ++ ++ +K DFGL+ + K+ +
Sbjct: 125 YTSQICKGMEYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKE 181
Query: 275 ---GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 306
++ APE L + K SDVWS GV+ Y L
Sbjct: 182 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 217
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 129/322 (40%), Gaps = 50/322 (15%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
YT+ + + G +G D + G VA+K++ R V+ + + V R
Sbjct: 24 YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFL----CKRVLR 78
Query: 158 EVKILQALAGHENVVKF---YNAFEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
E+++L H N++ + FE+ + +Y+ EL L +++ + + +
Sbjct: 79 EIRLLNHF-HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD--LAQVIHDQRIVISPQH 135
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
+ +L H G+VHRD+ P N L +++ + DF L+
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA---DNNDITICDFNLAREDTADANKTH 192
Query: 273 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKT-------------- 316
V +Y APE++ + G D+WS G + + + F T
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT 252
Query: 317 ---EDGIF------KEVLRNK-PDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAA 362
ED + ++ LRN + + W P+ A D + K+L +P+ R++
Sbjct: 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTE 312
Query: 363 QALSHPWVREGGDASEIPIDIS 384
QAL HP+ D P+D++
Sbjct: 313 QALRHPYFESLFD----PLDLT 330
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,669,782
Number of Sequences: 62578
Number of extensions: 696731
Number of successful extensions: 6699
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 568
Number of HSP's that attempted gapping in prelim test: 2630
Number of HSP's gapped (non-prelim): 1762
length of query: 574
length of database: 14,973,337
effective HSP length: 104
effective length of query: 470
effective length of database: 8,465,225
effective search space: 3978655750
effective search space used: 3978655750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)