Query 008204
Match_columns 574
No_of_seqs 644 out of 4839
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 20:38:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008204.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008204hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 2.8E-33 9.7E-38 299.7 21.7 280 147-438 13-323 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 4.6E-33 1.6E-37 298.1 22.4 261 148-419 80-367 (437)
3 1yyh_A HN1;, notch 1, ankyrin 100.0 1.9E-33 6.4E-38 279.3 17.7 217 147-373 9-247 (253)
4 1wdy_A 2-5A-dependent ribonucl 100.0 1.8E-32 6.2E-37 274.2 24.9 249 148-419 5-276 (285)
5 1wdy_A 2-5A-dependent ribonucl 100.0 1.6E-32 5.5E-37 274.6 23.3 222 148-377 39-281 (285)
6 2xai_A ASB-9, ankyrin repeat a 100.0 5E-33 1.7E-37 277.6 18.3 219 149-382 4-230 (261)
7 4b93_B Ankyrin repeat domain-c 100.0 1.1E-33 3.6E-38 284.7 11.4 205 148-361 11-230 (269)
8 3utm_A Tankyrase-1; tankyrase, 100.0 4.8E-32 1.6E-36 279.7 23.9 221 146-377 22-308 (351)
9 1k1a_A B-cell lymphoma 3-encod 100.0 4E-33 1.4E-37 273.1 14.5 220 147-373 8-240 (241)
10 3d9h_A CDNA FLJ77766, highly s 100.0 4.6E-32 1.6E-36 274.6 22.2 245 147-421 14-278 (285)
11 3ljn_A Hypothetical protein; a 100.0 7.5E-33 2.5E-37 289.4 16.7 223 146-375 18-270 (364)
12 2fo1_E LIN-12 protein; beta-ba 100.0 5.9E-33 2E-37 292.1 15.9 221 147-374 124-371 (373)
13 4g8k_A 2-5A-dependent ribonucl 100.0 9.8E-32 3.3E-36 278.0 24.3 246 148-419 25-324 (337)
14 3b7b_A Euchromatic histone-lys 100.0 2.4E-32 8.2E-37 267.4 18.6 211 148-369 11-230 (237)
15 3aji_A 26S proteasome non-ATPa 100.0 1.9E-32 6.5E-37 267.0 17.1 214 150-374 8-230 (231)
16 2f8y_A Notch homolog 1, transl 100.0 6.7E-32 2.3E-36 261.7 19.9 208 159-376 2-218 (223)
17 1oy3_D Transcription factor in 100.0 3.7E-32 1.3E-36 272.4 17.2 206 148-360 9-269 (282)
18 3d9h_A CDNA FLJ77766, highly s 100.0 4E-32 1.4E-36 275.0 17.1 212 148-374 59-279 (285)
19 1oy3_D Transcription factor in 100.0 2.5E-31 8.5E-36 266.3 19.2 189 180-377 6-253 (282)
20 2xai_A ASB-9, ankyrin repeat a 100.0 4.9E-31 1.7E-35 263.2 20.3 212 182-419 2-220 (261)
21 1yyh_A HN1;, notch 1, ankyrin 100.0 2.1E-31 7.3E-36 264.4 16.9 221 173-418 2-245 (253)
22 2dzn_A Probable 26S proteasome 100.0 3.4E-31 1.2E-35 257.4 17.1 209 149-370 3-226 (228)
23 4g8k_A 2-5A-dependent ribonucl 100.0 2E-30 6.7E-35 268.2 23.3 219 148-377 59-329 (337)
24 3eu9_A Huntingtin-interacting 100.0 5.6E-31 1.9E-35 256.8 18.1 218 147-375 8-236 (240)
25 2fo1_E LIN-12 protein; beta-ba 100.0 3.2E-31 1.1E-35 278.9 17.4 245 148-419 94-369 (373)
26 3b7b_A Euchromatic histone-lys 100.0 3.2E-30 1.1E-34 252.3 21.4 193 173-376 3-204 (237)
27 4b93_B Ankyrin repeat domain-c 100.0 1.6E-30 5.6E-35 261.4 18.7 188 182-377 10-213 (269)
28 3utm_A Tankyrase-1; tankyrase, 100.0 2.3E-30 8E-35 267.1 20.4 215 147-373 57-333 (351)
29 1s70_B 130 kDa myosin-binding 100.0 2.3E-31 7.8E-36 269.7 12.5 202 148-360 40-276 (299)
30 2rfa_A Transient receptor pote 100.0 2.6E-30 9E-35 252.2 18.3 193 149-376 4-224 (232)
31 3kea_A K1L; tropism, ANK repea 100.0 1.3E-30 4.5E-35 264.0 15.9 225 158-419 10-244 (285)
32 4gpm_A Engineered protein OR26 100.0 7.8E-30 2.7E-34 238.5 19.4 133 240-376 27-163 (169)
33 1k1a_A B-cell lymphoma 3-encod 100.0 5.8E-30 2E-34 250.6 19.3 188 180-376 6-210 (241)
34 1ikn_D Protein (I-kappa-B-alph 100.0 2E-30 6.7E-35 254.2 15.3 188 149-376 9-211 (236)
35 3hra_A Ankyrin repeat family p 100.0 1.2E-29 4E-34 241.8 20.2 185 149-372 6-201 (201)
36 3kea_A K1L; tropism, ANK repea 100.0 6.4E-31 2.2E-35 266.3 12.1 210 147-376 30-248 (285)
37 2etb_A Transient receptor pote 100.0 3.1E-30 1.1E-34 255.9 14.2 195 148-375 2-247 (256)
38 3aji_A 26S proteasome non-ATPa 100.0 4E-29 1.4E-33 243.4 20.7 215 182-419 5-228 (231)
39 2dzn_A Probable 26S proteasome 100.0 1E-28 3.5E-33 239.9 22.1 186 183-377 2-203 (228)
40 3ljn_A Hypothetical protein; a 100.0 1.1E-29 3.8E-34 265.4 14.4 224 172-423 11-270 (364)
41 4gpm_A Engineered protein OR26 100.0 7.2E-29 2.5E-33 231.9 18.3 156 149-344 5-164 (169)
42 1s70_B 130 kDa myosin-binding 100.0 5.2E-29 1.8E-33 252.3 15.9 188 181-376 38-259 (299)
43 3jxi_A Vanilloid receptor-rela 100.0 4.4E-29 1.5E-33 248.0 14.9 203 147-376 4-252 (260)
44 2pnn_A Transient receptor pote 100.0 7.5E-29 2.6E-33 248.5 15.9 203 147-376 12-261 (273)
45 2f8y_A Notch homolog 1, transl 100.0 1.4E-27 4.7E-32 231.3 18.4 200 197-419 9-214 (223)
46 2rfa_A Transient receptor pote 100.0 4E-27 1.4E-31 229.6 20.4 192 183-419 3-220 (232)
47 3eu9_A Huntingtin-interacting 99.9 3.2E-27 1.1E-31 230.1 18.9 218 180-419 6-233 (240)
48 2rfm_A Putative ankyrin repeat 99.9 2.1E-27 7.3E-32 225.2 16.7 156 180-373 32-191 (192)
49 1sw6_A Regulatory protein SWI6 99.9 9.1E-29 3.1E-33 255.5 7.5 194 150-360 99-327 (327)
50 4hbd_A KN motif and ankyrin re 99.9 7.5E-28 2.6E-32 242.6 13.4 181 153-373 81-274 (276)
51 1ikn_D Protein (I-kappa-B-alph 99.9 3.5E-27 1.2E-31 231.0 17.2 192 180-419 5-207 (236)
52 3v31_A Ankyrin repeat family A 99.9 7.3E-27 2.5E-31 216.2 17.5 154 183-374 3-160 (167)
53 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.2E-26 4.1E-31 215.7 18.6 153 182-372 13-169 (169)
54 1ihb_A P18-INK4C(INK6), cyclin 99.9 6.4E-27 2.2E-31 215.2 16.4 154 182-374 4-162 (162)
55 2etb_A Transient receptor pote 99.9 2.7E-27 9.2E-32 234.8 14.1 196 183-419 2-244 (256)
56 1sw6_A Regulatory protein SWI6 99.9 2.6E-27 8.9E-32 244.6 10.2 205 158-377 29-311 (327)
57 3v30_A DNA-binding protein rfx 99.9 3.3E-26 1.1E-30 212.9 16.6 156 183-376 2-162 (172)
58 2pnn_A Transient receptor pote 99.9 1.5E-26 5E-31 231.8 15.1 203 180-420 10-257 (273)
59 1awc_B Protein (GA binding pro 99.9 5.9E-26 2E-30 207.3 17.6 147 183-368 2-152 (153)
60 3hra_A Ankyrin repeat family p 99.9 1.1E-25 3.7E-30 214.2 20.0 187 182-418 4-200 (201)
61 3twr_A Tankyrase-2; ankyrin re 99.9 3E-26 1E-30 211.7 14.6 155 181-373 6-164 (165)
62 3f6q_A Integrin-linked protein 99.9 4.6E-26 1.6E-30 213.7 14.3 159 182-377 4-166 (179)
63 1d9s_A Cyclin-dependent kinase 99.9 4.7E-26 1.6E-30 204.0 11.7 130 240-374 2-136 (136)
64 3v30_A DNA-binding protein rfx 99.9 1.1E-25 3.8E-30 209.3 14.6 163 150-352 4-171 (172)
65 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.8E-25 9.7E-30 202.9 16.7 150 183-371 2-155 (156)
66 1ihb_A P18-INK4C(INK6), cyclin 99.9 3.3E-25 1.1E-29 203.6 15.8 153 148-341 5-162 (162)
67 3jxi_A Vanilloid receptor-rela 99.9 1.3E-25 4.6E-30 222.8 13.8 200 182-419 4-248 (260)
68 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.9E-24 6.6E-29 200.7 17.9 154 146-339 12-169 (169)
69 2rfm_A Putative ankyrin repeat 99.9 1.4E-24 4.7E-29 205.8 15.2 159 243-419 28-190 (192)
70 2jab_A H10-2-G3; HER2, darpin, 99.9 3.5E-24 1.2E-28 191.8 14.7 121 251-372 12-136 (136)
71 1ycs_B 53BP2, P53BP2; ankyrin 99.9 7.2E-25 2.4E-29 215.8 11.0 132 240-376 28-166 (239)
72 3f6q_A Integrin-linked protein 99.9 2.2E-24 7.4E-29 202.2 13.2 162 148-349 5-171 (179)
73 3v31_A Ankyrin repeat family A 99.9 3.4E-24 1.2E-28 198.2 13.2 154 150-343 5-162 (167)
74 1awc_B Protein (GA binding pro 99.9 1.4E-23 4.8E-28 191.4 17.1 146 149-335 3-152 (153)
75 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.2E-25 1.1E-29 218.3 6.2 173 148-361 5-193 (239)
76 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.2E-23 4.1E-28 184.0 15.4 122 252-374 1-126 (126)
77 3twr_A Tankyrase-2; ankyrin re 99.9 1.5E-23 5.2E-28 193.4 16.5 153 251-419 6-163 (165)
78 3c5r_A BARD-1, BRCA1-associate 99.9 1E-24 3.5E-29 195.2 7.7 129 240-373 1-133 (137)
79 2vge_A RELA-associated inhibit 99.9 3.9E-27 1.3E-31 231.0 -9.0 176 182-369 20-208 (229)
80 1bi7_B P16INK4A, MTS1, multipl 99.9 4E-24 1.4E-28 196.0 10.2 126 250-377 9-139 (156)
81 4hbd_A KN motif and ankyrin re 99.9 1.1E-23 3.6E-28 212.2 13.2 159 243-419 104-273 (276)
82 2vge_A RELA-associated inhibit 99.9 6.4E-24 2.2E-28 208.1 9.9 139 238-377 6-151 (229)
83 1bi7_B P16INK4A, MTS1, multipl 99.9 9.5E-24 3.3E-28 193.5 10.4 138 180-356 9-151 (156)
84 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.3E-22 4.5E-27 185.1 15.8 148 149-338 3-155 (156)
85 3t8k_A Uncharacterized protein 99.9 5E-24 1.7E-28 202.1 5.4 120 252-372 37-177 (186)
86 1d9s_A Cyclin-dependent kinase 99.9 5.2E-23 1.8E-27 184.1 10.0 129 172-341 3-136 (136)
87 3aaa_C Myotrophin, protein V-1 99.9 3.8E-22 1.3E-26 175.1 14.1 106 251-357 5-114 (123)
88 2aja_A Ankyrin repeat family p 99.9 9.5E-24 3.2E-28 221.9 1.6 174 151-375 68-251 (376)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.1E-21 7.3E-26 169.6 14.6 122 182-341 1-126 (126)
90 3ehr_A Osteoclast-stimulating 99.9 1.5E-22 5.3E-27 196.3 8.0 125 252-376 72-200 (222)
91 3deo_A Signal recognition part 99.9 1.8E-22 6.3E-27 190.1 6.5 109 252-362 43-156 (183)
92 3t8k_A Uncharacterized protein 99.9 2.5E-22 8.7E-27 190.3 6.8 159 151-346 9-184 (186)
93 2jab_A H10-2-G3; HER2, darpin, 99.9 3.8E-21 1.3E-25 171.9 14.0 120 182-339 13-136 (136)
94 1dcq_A PYK2-associated protein 99.8 1.3E-20 4.3E-25 190.1 17.8 124 252-376 129-265 (278)
95 1n0q_A 3ANK, 3 ankyrin repeats 99.8 6.4E-21 2.2E-25 158.8 12.3 93 281-374 1-93 (93)
96 3ui2_A Signal recognition part 99.8 2.7E-21 9.1E-26 191.0 11.3 106 252-359 44-154 (244)
97 3deo_A Signal recognition part 99.8 2.9E-21 1E-25 181.8 9.2 135 181-371 42-181 (183)
98 2aja_A Ankyrin repeat family p 99.8 5.2E-23 1.8E-27 216.3 -4.5 205 148-372 92-342 (376)
99 3lvq_E ARF-GAP with SH3 domain 99.8 2.9E-20 1E-24 202.8 15.3 125 252-377 131-268 (497)
100 2b0o_E UPLC1; arfgap, structur 99.8 1.2E-20 4E-25 192.6 10.2 136 183-362 151-299 (301)
101 2b0o_E UPLC1; arfgap, structur 99.8 2.5E-19 8.5E-24 182.8 19.1 121 252-373 150-283 (301)
102 3c5r_A BARD-1, BRCA1-associate 99.8 7.3E-21 2.5E-25 170.0 6.4 124 180-341 7-134 (137)
103 1n0q_A 3ANK, 3 ankyrin repeats 99.8 7.6E-20 2.6E-24 152.3 11.9 89 252-341 1-93 (93)
104 3jue_A Arfgap with coiled-coil 99.8 6.4E-20 2.2E-24 192.1 13.8 121 252-373 198-325 (368)
105 3ehr_A Osteoclast-stimulating 99.8 1.6E-20 5.5E-25 182.0 8.4 133 180-350 70-207 (222)
106 2l6b_A NR1C; ankyrin, consensu 99.8 2.5E-20 8.6E-25 161.3 7.4 103 250-353 6-112 (115)
107 3aaa_C Myotrophin, protein V-1 99.8 1E-18 3.5E-23 153.0 11.9 98 278-376 3-100 (123)
108 3ui2_A Signal recognition part 99.8 3.4E-19 1.2E-23 175.8 9.5 137 182-374 44-185 (244)
109 3lvq_E ARF-GAP with SH3 domain 99.8 1E-18 3.5E-23 190.5 13.6 133 185-358 134-276 (497)
110 2l6b_A NR1C; ankyrin, consensu 99.8 4.8E-19 1.6E-23 153.1 8.1 99 278-377 5-103 (115)
111 3jue_A Arfgap with coiled-coil 99.8 1.3E-18 4.3E-23 182.3 12.3 142 212-360 199-348 (368)
112 2zgd_A 3 repeat synthetic anky 99.7 3.7E-18 1.3E-22 146.9 10.5 91 277-368 19-109 (110)
113 1dcq_A PYK2-associated protein 99.7 7.6E-18 2.6E-22 169.8 11.9 102 240-342 153-264 (278)
114 3htm_A Speckle-type POZ protei 99.7 7E-17 2.4E-21 150.5 8.5 139 37-207 22-161 (172)
115 2zgd_A 3 repeat synthetic anky 99.7 3E-16 1E-20 134.8 10.7 86 249-335 20-109 (110)
116 3hve_A Gigaxonin; ubiquitin, c 99.6 2.3E-16 7.9E-21 156.9 9.6 141 36-206 18-159 (256)
117 2yy9_A Zinc finger and BTB dom 99.6 7.9E-17 2.7E-21 144.3 4.3 105 37-174 13-118 (135)
118 2ppi_A Gigaxonin; BTB domain, 99.6 4.1E-16 1.4E-20 141.2 8.9 107 37-170 35-142 (144)
119 4eoz_A Speckle-type POZ protei 99.6 1.2E-16 4.2E-21 144.5 5.3 130 37-198 13-143 (145)
120 3b84_A Zinc finger and BTB dom 99.6 3.4E-16 1.2E-20 137.0 7.4 94 46-172 22-115 (119)
121 2if5_A Zinc finger and BTB dom 99.6 3.6E-16 1.2E-20 136.9 7.4 105 37-170 13-118 (120)
122 3ohu_A Transcription regulator 99.6 1.4E-16 4.9E-21 140.6 4.1 104 37-170 20-124 (125)
123 1r29_A B-cell lymphoma 6 prote 99.6 6.7E-16 2.3E-20 136.7 8.5 103 38-170 18-122 (127)
124 2z8h_A Transcription regulator 99.6 8.4E-16 2.9E-20 138.1 8.9 107 37-173 24-131 (138)
125 3fkc_A Transcriptional regulat 99.6 2.3E-16 7.8E-21 137.5 4.3 97 36-165 18-115 (116)
126 2vpk_A Myoneurin; transcriptio 99.6 9.9E-16 3.4E-20 133.3 6.7 92 46-170 20-113 (116)
127 1buo_A POZ domain, protein (pr 99.6 9E-16 3.1E-20 134.7 6.4 99 38-170 17-116 (121)
128 2vkp_A BTB/POZ domain-containi 99.6 1.6E-15 5.5E-20 130.3 7.7 95 46-170 6-104 (109)
129 2q81_A MIZ-1 protein; BTB/POZ 99.6 9.6E-16 3.3E-20 134.1 6.3 91 46-170 25-115 (119)
130 2ihc_A Transcription regulator 99.6 6E-16 2E-20 136.5 5.0 105 37-171 17-122 (124)
131 3hqi_A Speckle-type POZ protei 99.6 2.2E-15 7.5E-20 154.2 7.9 136 40-207 165-301 (312)
132 3i3n_A Kelch-like protein 11; 99.6 7.5E-16 2.6E-20 155.2 3.6 146 36-207 19-168 (279)
133 3ga1_A Nucleus accumbens-assoc 99.5 2.2E-15 7.6E-20 133.7 4.9 104 37-173 21-126 (129)
134 3m5b_A Zinc finger and BTB dom 99.5 3E-15 1E-19 130.9 2.3 89 46-172 28-116 (119)
135 2ast_A S-phase kinase-associat 98.3 9.2E-07 3.1E-11 80.8 6.7 126 51-191 3-136 (159)
136 4ajy_C Transcription elongatio 97.9 2.6E-05 8.7E-10 64.9 7.0 84 51-159 4-96 (97)
137 1fs1_B SKP1, cyclin A/CDK2-ass 97.5 0.00022 7.4E-09 63.5 7.5 121 51-191 4-131 (141)
138 2p1m_A SKP1-like protein 1A; F 97.1 6.3E-05 2.2E-09 68.5 -0.7 120 51-189 6-133 (160)
139 3drz_A BTB/POZ domain-containi 95.6 0.017 5.8E-07 48.5 5.9 93 51-169 8-102 (107)
140 2fnj_C Transcription elongatio 94.9 0.055 1.9E-06 44.4 6.5 90 51-159 3-95 (96)
141 1hv2_A Elongin C, ELC1; protei 94.8 0.087 3E-06 43.4 7.5 92 51-159 6-98 (99)
142 3v7d_A Suppressor of kinetocho 94.5 0.062 2.1E-06 49.0 6.5 118 51-175 9-133 (169)
143 3drx_A BTB/POZ domain-containi 90.4 0.56 1.9E-05 43.6 7.1 96 51-172 14-111 (202)
144 1vcb_B Protein (elongin C); tu 86.5 0.97 3.3E-05 38.0 5.4 91 51-159 19-111 (112)
145 3kvt_A Potassium channel prote 54.0 12 0.00041 31.3 4.0 85 51-163 7-92 (115)
146 1s1g_A Potassium voltage-gated 42.4 21 0.00071 30.3 3.8 85 51-164 15-100 (124)
147 1t1d_A Protein (potassium chan 40.8 75 0.0026 25.6 6.8 86 51-164 3-90 (100)
148 1d8b_A SGS1 RECQ helicase; fiv 38.9 22 0.00077 27.6 3.0 66 455-533 8-73 (81)
149 2nz0_B Potassium voltage-gated 36.9 19 0.00064 31.3 2.7 86 50-164 36-122 (140)
150 1nn7_A Potassium channel KV4.2 29.5 23 0.0008 28.9 1.9 84 51-163 2-86 (105)
151 2kzi_A Engineered protein, ZHE 27.7 29 0.00099 25.8 1.9 41 503-543 25-65 (70)
152 3qwo_C Motavizumab epitope sca 25.9 35 0.0012 24.3 1.9 40 504-543 11-50 (57)
153 3gna_A RAG-1, V(D)J recombinat 24.6 51 0.0017 25.2 2.8 24 517-542 33-56 (96)
154 1xaw_A Occludin; coiled-coil, 22.3 81 0.0028 27.2 4.0 32 504-535 34-72 (140)
155 1dee_G Immunoglobulin G bindin 21.6 46 0.0016 23.5 1.9 40 504-543 10-49 (54)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.8e-33 Score=299.72 Aligned_cols=280 Identities=17% Similarity=0.120 Sum_probs=225.4
Q ss_pred hHHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcc
Q 008204 147 YVIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPD 222 (574)
Q Consensus 147 ~~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~ 222 (574)
.+.++||+|+..|..+++++|+++|++++.. +..|.||||+|+..|+.+ |++.|++++.++..|.||||.|+..
T Consensus 13 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (437)
T 1n11_A 13 SGLTPLHVASFMGHLPIVKNLLQRGASPNVS--NVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARI 90 (437)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSCCS--SSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHC
Confidence 4567899999999999999999999999876 455999999999999965 7778888888999999999999988
Q ss_pred hhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHH
Q 008204 223 EVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVF 298 (574)
Q Consensus 223 ~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v 298 (574)
+ ..+++++|++. |++++..+. .|.||||+|+..|+.+++++|++.+ . .+..|.||||+|+..|+.+++
T Consensus 91 g-~~~~v~~Ll~~----ga~~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v 162 (437)
T 1n11_A 91 G-HTNMVKLLLEN----NANPNLATT---AGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVA 162 (437)
T ss_dssp T-CHHHHHHHHHH----TCCTTCCCT---TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred C-CHHHHHHHHhC----CCCCCCCCC---CCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHH
Confidence 8 78899999855 899998887 9999999999999999999999998 2 467899999999999999999
Q ss_pred HHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCccch
Q 008204 299 KEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETNKD 378 (574)
Q Consensus 299 ~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~~ 378 (574)
++|++.| +++|..+..|+||||+|+..|+.+++++|+++|++++..+.+|+||||+|+..|+.++++.|++.|.+++..
T Consensus 163 ~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 241 (437)
T 1n11_A 163 ELLLERD-AHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAE 241 (437)
T ss_dssp HHHHHTT-CCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHhCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Confidence 9999998 999999999999999999999999999999999999999999999999999999999999999988766511
Q ss_pred -------------hhHHH----HHHchhccCC--CCCCcccchhhhcccchhhHHHHHhcCchhh----ccccccccccc
Q 008204 379 -------------WLCID----VLERDMTTNS--TSGNLAMSSEVIDDVFQMNLDYLENRGADIA----IGLSALGRKRL 435 (574)
Q Consensus 379 -------------~~~~~----ile~~~~~~~--~~~~~~~~~~~~~~~l~~~ll~le~~vadi~----~gl~~~~~~~~ 435 (574)
....+ +++.+...+. ..+.++++.++..+...+..++++.+ +++. .|.||+..+..
T Consensus 242 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~ 320 (437)
T 1n11_A 242 SVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG-VMVDATTRMGYTPLHVASH 320 (437)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCSSCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC-ccCCCCCCCCCCHHHHHHH
Confidence 11222 3333333333 23455666666666777777777776 4333 45566544443
Q ss_pred cCC
Q 008204 436 SGN 438 (574)
Q Consensus 436 ~~~ 438 (574)
.++
T Consensus 321 ~g~ 323 (437)
T 1n11_A 321 YGN 323 (437)
T ss_dssp SSC
T ss_pred cCc
Confidence 333
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.6e-33 Score=298.10 Aligned_cols=261 Identities=16% Similarity=0.118 Sum_probs=186.9
Q ss_pred HHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcch
Q 008204 148 VIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDE 223 (574)
Q Consensus 148 ~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~ 223 (574)
..++||+|+..|..+++++|+++|++++.. +..|.||||+|+..|+.+ |++.+++.+..+..|.||||.|+..+
T Consensus 80 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g 157 (437)
T 1n11_A 80 DQTPLHCAARIGHTNMVKLLLENNANPNLA--TTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYG 157 (437)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCCTTCC--CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHCCCHHHHHHHHhCCCCCCCC--CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcC
Confidence 345778888888888888888888877765 445778888888887755 55566666666777777887777766
Q ss_pred hhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHH
Q 008204 224 VSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFK 299 (574)
Q Consensus 224 ~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~ 299 (574)
..+++++|++. |++++..+. .|.||||+|+..|+.+++++|++.| + .+..|.||||+|+..|+.++++
T Consensus 158 -~~~~v~~Ll~~----g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 229 (437)
T 1n11_A 158 -KVRVAELLLER----DAHPNAAGK---NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVAR 229 (437)
T ss_dssp -CHHHHHHHHHT----TCCTTCCCS---SCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred -CHHHHHHHHhC----CCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 66777777744 777777776 7888888888888888888888877 2 3456778888888888888888
Q ss_pred HHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCccc--
Q 008204 300 EVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETNK-- 377 (574)
Q Consensus 300 ~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~-- 377 (574)
.|++.| +++|..+..|+||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|++.|..++.
T Consensus 230 ~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 308 (437)
T 1n11_A 230 SLLQYG-GSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATT 308 (437)
T ss_dssp HHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC
T ss_pred HHHHcC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCC
Confidence 888877 78888888888888888888888888888888888888888888888888888888888888877665541
Q ss_pred ---------------hhhHHHHHHchhccCCC--CCCcccchhhhcccchhhHHHHHhc
Q 008204 378 ---------------DWLCIDVLERDMTTNST--SGNLAMSSEVIDDVFQMNLDYLENR 419 (574)
Q Consensus 378 ---------------~~~~~~ile~~~~~~~~--~~~~~~~~~~~~~~l~~~ll~le~~ 419 (574)
......+++.+.+.+.. .+.++++.++..+...+..++++++
T Consensus 309 ~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g 367 (437)
T 1n11_A 309 RMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG 367 (437)
T ss_dssp SSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCc
Confidence 12233344444444443 2444555555555666666666665
No 3
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.9e-33 Score=279.30 Aligned_cols=217 Identities=16% Similarity=0.071 Sum_probs=170.0
Q ss_pred hHHHHHHHHHHcC-------------chhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhcccccc
Q 008204 147 YVIESIYASAAFK-------------MTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARS 209 (574)
Q Consensus 147 ~~~elL~~A~~~~-------------~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~ 209 (574)
.+.++||+|+..| ..+++++|+++|++++.. .+.+|.||||+|+..|+.+ |+++|++++..+
T Consensus 9 ~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 87 (253)
T 1yyh_A 9 DGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQ-TDRTGETALHLAARYSRSDAAKRLLEASADANIQD 87 (253)
T ss_dssp -------------------------------------------C-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 4678999999877 899999999999998753 1456999999999999965 778889999999
Q ss_pred ccccccccccCcchhhHHHHHHHhhcccccCC-CcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCcc
Q 008204 210 NIDNVCLEKELPDEVSSEIKSLRVKSNQESEA-NIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDAC 284 (574)
Q Consensus 210 ~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga-~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~t 284 (574)
..|.||||.|+..+ ..+++++|++. |+ +++..+. .|.||||+|+..|+.+++++|++.| + .|..|+|
T Consensus 88 ~~g~t~L~~A~~~~-~~~~v~~Ll~~----~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t 159 (253)
T 1yyh_A 88 NMGRTPLHAAVSAD-AQGVFQILIRN----RATDLDARMH---DGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKS 159 (253)
T ss_dssp TTSCCHHHHHHHHT-CHHHHHHHHHS----TTSCTTCCCT---TCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCB
T ss_pred CCCCCHHHHHHHcC-CHHHHHHHHHc----CCCCccccCC---CCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCC
Confidence 99999999999887 78888888854 65 7888877 9999999999999999999999999 4 4678999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhh
Q 008204 285 ALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKD 364 (574)
Q Consensus 285 pLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~ 364 (574)
|||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 160 ~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i 238 (253)
T 1yyh_A 160 ALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDI 238 (253)
T ss_dssp HHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHH
Confidence 999999999999999999998 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCC
Q 008204 365 YIEATKQGQ 373 (574)
Q Consensus 365 v~~l~~~G~ 373 (574)
++++.....
T Consensus 239 ~~~l~~~~~ 247 (253)
T 1yyh_A 239 VRLLDLEHH 247 (253)
T ss_dssp HHHHHC---
T ss_pred HHHHHHHhh
Confidence 999987654
No 4
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-32 Score=274.19 Aligned_cols=249 Identities=17% Similarity=0.065 Sum_probs=219.0
Q ss_pred HHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcch
Q 008204 148 VIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDE 223 (574)
Q Consensus 148 ~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~ 223 (574)
..++|+.|+..|..+++++|++.|++++... +..|.||||+|+..|+.+ |+++|++++.++..|.||||.++..+
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQE-EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAG 83 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCccccc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence 5689999999999999999999999988652 345899999999999965 77788888889999999999999887
Q ss_pred hhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-CC-------------CCCCccHHHHH
Q 008204 224 VSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-KV-------------TLDDACALHYA 289 (574)
Q Consensus 224 ~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~-------------d~~g~tpLh~A 289 (574)
..+++++|++. |++++..|. .|+||||+|+..|+.+++++|++.| ++ +..|.||||+|
T Consensus 84 -~~~~v~~Ll~~----g~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A 155 (285)
T 1wdy_A 84 -SVKLLKLFLSK----GADVNECDF---YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 155 (285)
T ss_dssp -CHHHHHHHHHT----TCCTTCBCT---TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHH
T ss_pred -CHHHHHHHHHc----CCCCCccCc---ccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHH
Confidence 78889998854 999998887 9999999999999999999999998 33 56689999999
Q ss_pred HHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCC----HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhH
Q 008204 290 AAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKE----PEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDY 365 (574)
Q Consensus 290 a~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~----~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v 365 (574)
+..|+.+++++|++..+++++..|..|+||||+|+..++ .+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 156 ~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 235 (285)
T 1wdy_A 156 AEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLV 235 (285)
T ss_dssp HHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 999999999999998449999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHh-cCCCccchhhHHHHHHchhccCCCCCCcccchhhhcccchhhHHHHHhc
Q 008204 366 IEATK-QGQETNKDWLCIDVLERDMTTNSTSGNLAMSSEVIDDVFQMNLDYLENR 419 (574)
Q Consensus 366 ~~l~~-~G~~~~~~~~~~~ile~~~~~~~~~~~~~~~~~~~~~~l~~~ll~le~~ 419 (574)
+.|++ .|.+++.. ...+.+++..++..+...+..++++++
T Consensus 236 ~~Ll~~~g~~~~~~--------------~~~g~t~l~~A~~~~~~~i~~~Ll~~G 276 (285)
T 1wdy_A 236 QRLLEQEHIEINDT--------------DSDGKTALLLAVELKLKKIAELLCKRG 276 (285)
T ss_dssp HHHHHSSSCCTTCC--------------CTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHhccCCCcccc--------------CCCCCcHHHHHHHcCcHHHHHHHHHcC
Confidence 99999 77765531 124566777777778888888888887
No 5
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-32 Score=274.59 Aligned_cols=222 Identities=17% Similarity=0.120 Sum_probs=203.1
Q ss_pred HHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcch
Q 008204 148 VIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDE 223 (574)
Q Consensus 148 ~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~ 223 (574)
..++||+|+..+..+++++|+++|++++.+ +.+|.||||+|+..|+.+ |+++|++++..+..|.||++.++..+
T Consensus 39 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 116 (285)
T 1wdy_A 39 GWTPLHNAVQMSREDIVELLLRHGADPVLR--KKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYG 116 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhC
Confidence 457899999999999999999999999887 556999999999999965 77788889999999999999999888
Q ss_pred hhHHHHHHHhhcccccCCCcccCCCC-------CCCCchHHHHHHHcCCHHHHHHHHhC-C-C---CCCCCccHHHHHHH
Q 008204 224 VSSEIKSLRVKSNQESEANIKEVDPM-------HEKRVRRIHKALDSDDFELLNLLLNE-Y-K---VTLDDACALHYAAA 291 (574)
Q Consensus 224 ~~~~i~~~L~~~~~~~ga~~n~~d~~-------~~~g~tpLh~A~~~g~~~~v~~Ll~~-g-~---~d~~g~tpLh~Aa~ 291 (574)
..+++++|++. |++++..+.. +..|.||||+|+..|+.+++++|++. | + .|..|+||||+|+.
T Consensus 117 -~~~~~~~Ll~~----g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 191 (285)
T 1wdy_A 117 -KVKALKFLYKR----GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 191 (285)
T ss_dssp -CHHHHHHHHHT----TCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHH
T ss_pred -CHHHHHHHHHh----CCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 78889998855 8888887321 34899999999999999999999998 6 3 46789999999999
Q ss_pred cCC----HHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCChhhHH
Q 008204 292 YCN----PKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLS-KGACSSETTPDGQTAVAICRRMTRRKDYI 366 (574)
Q Consensus 292 ~g~----~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~-~GAdvn~~d~~G~TpL~~A~~~g~~~~v~ 366 (574)
.++ .+++++|++.| +++|.+|..|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+.++++
T Consensus 192 ~~~~~~~~~i~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~ 270 (285)
T 1wdy_A 192 SSDDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAE 270 (285)
T ss_dssp CSCTTTHHHHHHHHHHTT-CCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred ccccchHHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHH
Confidence 999 99999999998 9999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHhcCCCccc
Q 008204 367 EATKQGQETNK 377 (574)
Q Consensus 367 ~l~~~G~~~~~ 377 (574)
+|++.|+++..
T Consensus 271 ~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 271 LLCKRGASTDC 281 (285)
T ss_dssp HHHHHSSCSCC
T ss_pred HHHHcCCCCCc
Confidence 99999998864
No 6
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=5e-33 Score=277.65 Aligned_cols=219 Identities=16% Similarity=0.071 Sum_probs=196.7
Q ss_pred HHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcchh
Q 008204 149 IESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDEV 224 (574)
Q Consensus 149 ~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~~ 224 (574)
.++||.|+..|..+++++|+++|++++.. +.+|.||||+|+..|+.+ |+++|++++..+..|.||+|.|+..+
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~- 80 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGWAVNII--TADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSG- 80 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCC--CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT-
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC-
Confidence 46899999999999999999999999987 556999999999999955 77889999999999999999999888
Q ss_pred hHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHH
Q 008204 225 SSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKE 300 (574)
Q Consensus 225 ~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~ 300 (574)
..+++++|++. |++++..+ .|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++
T Consensus 81 ~~~~v~~Ll~~----g~~~~~~~----~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 152 (261)
T 2xai_A 81 SWDCVNLLLQH----GASVQPES----DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKK 152 (261)
T ss_dssp CHHHHHHHHHT----TCCSSCSC----TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHC----CCCCCCCC----CCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHH
Confidence 78899999855 88887533 7999999999999999999999999 4 45789999999999999999999
Q ss_pred HHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCccchhh
Q 008204 301 VHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETNKDWL 380 (574)
Q Consensus 301 LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~~~~ 380 (574)
|++.| +++|. |..|+||||+|+..|+.+++++|+++|+|++.+|.+|+||||+|+. +..+++.+++.+..+.-...
T Consensus 153 Ll~~g-~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~--~~~~~~~ll~~~~~~~l~~~ 228 (261)
T 2xai_A 153 LLESG-ADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPP--ESPLAQLFLEREGPPSLMQL 228 (261)
T ss_dssp HHHHT-CCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT--TCTHHHHHHHC-CCCCHHHH
T ss_pred HHHcC-CCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccc--cccHHHHHHhccCCccHHHH
Confidence 99998 99995 8999999999999999999999999999999999999999999995 45689999999877665444
Q ss_pred HH
Q 008204 381 CI 382 (574)
Q Consensus 381 ~~ 382 (574)
|.
T Consensus 229 ~~ 230 (261)
T 2xai_A 229 CR 230 (261)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 7
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=284.68 Aligned_cols=205 Identities=20% Similarity=0.216 Sum_probs=165.8
Q ss_pred HHHHHHHHHHcCchhhHhhhcccCcccchh------ccccCCchHHHHHHHcCCH-----hHHhhhhccccccccccccc
Q 008204 148 VIESIYASAAFKMTEVVSVYEGWLLKVVRE------ALVEDVIPILVAALQCQLY-----PLCSFCIQRIARSNIDNVCL 216 (574)
Q Consensus 148 ~~elL~~A~~~~~~elv~~Ll~~gadvn~~------~~~~~g~t~L~~A~~~g~~-----~Ll~~ga~~~~~~~~~~t~l 216 (574)
..++|+.|+..|..+++++|++.+.+.... ..+..+.|||+.|+..+.. .|++.|+++|.++..|.|||
T Consensus 11 ~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpL 90 (269)
T 4b93_B 11 EVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPL 90 (269)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHH
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 578999999999999999999998764221 1134589999999988763 38889999999999999999
Q ss_pred cccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHc
Q 008204 217 EKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAY 292 (574)
Q Consensus 217 ~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~ 292 (574)
|.|+..+ ..+++++|++. |++++..+. .|.||+|+|+..++.+++++|++.| + .|..|+||||+|+..
T Consensus 91 h~A~~~g-~~~~v~~Ll~~----~a~~~~~~~---~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~ 162 (269)
T 4b93_B 91 HVAALHG-RADLIPLLLKH----GANAGARNA---DQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSG 162 (269)
T ss_dssp HHHHHTT-CTTHHHHHHHT----TCCTTCCCT---TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHT
T ss_pred HHHHHcC-cHHHHHHHHhc----CCCcCccCC---CCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence 9999887 78899999855 999999888 9999999999999999999999999 4 467899999999999
Q ss_pred CCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q 008204 293 CNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTR 361 (574)
Q Consensus 293 g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~ 361 (574)
|+.++|++||+.| +|+|.+|..|+||||+|+..|+.++|++||++|||++.+|.+|+||||+|+++++
T Consensus 163 g~~~~v~~Ll~~g-advn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 163 GHHELVALLLQHG-ASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp TCGGGHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred CCHHHHHHHHHCC-CCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 9999999999998 9999999999999999999999999999999999999999999999999987664
No 8
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=4.8e-32 Score=279.75 Aligned_cols=221 Identities=22% Similarity=0.150 Sum_probs=198.6
Q ss_pred hhHHHHHHHHHHcCchhhHhhhcc-cCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccC
Q 008204 146 NYVIESIYASAAFKMTEVVSVYEG-WLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKEL 220 (574)
Q Consensus 146 ~~~~elL~~A~~~~~~elv~~Ll~-~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~ 220 (574)
.+..++|+.|+..|..+.++.++. .+.+++.. +..|.||||+|+..|+.+ |+++|++++.++..|.||||.|+
T Consensus 22 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 99 (351)
T 3utm_A 22 EYKKDELLEAARSGNEEKLMALLTPLNVNCHAS--DGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNAC 99 (351)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCS--STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred cccchhHHHHHHcCCHHHHHHHHHhcCCCcccC--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHH
Confidence 456789999999999997765554 58888877 556999999999999965 77888899999999999999999
Q ss_pred cchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-CC---------------------
Q 008204 221 PDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-KV--------------------- 278 (574)
Q Consensus 221 ~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~--------------------- 278 (574)
..+ ..+++++|++. |++++..|. .|+||||+|+..|+.+++++|+++| ++
T Consensus 100 ~~g-~~~iv~~Ll~~----g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~ 171 (351)
T 3utm_A 100 SYG-HYEVTELLLKH----GACVNAMDL---WQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRE 171 (351)
T ss_dssp HTT-CHHHHHHHHHT----TCCTTCCCT---TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHH
T ss_pred HCC-CHHHHHHHHHC----CCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHH
Confidence 888 78899999855 999999887 9999999999999999999999998 32
Q ss_pred ------------------------------------CCCCccHHHHHHHc---CCHHHHHHHHHcCCCCccccCCCCChH
Q 008204 279 ------------------------------------TLDDACALHYAAAY---CNPKVFKEVHNMGLADINLKDARGRTV 319 (574)
Q Consensus 279 ------------------------------------d~~g~tpLh~Aa~~---g~~~~v~~LL~~g~advn~~d~~G~Tp 319 (574)
+..|.||||+|+.. +..+++++|++.| +++|.+|..|+||
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~ 250 (351)
T 3utm_A 172 RLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKG-ANVNEKNKDFMTP 250 (351)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT-CCTTCCCTTCCCH
T ss_pred HHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcC-CCcCCcCCCCCCH
Confidence 24578999999999 5589999999998 9999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCccc
Q 008204 320 LHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETNK 377 (574)
Q Consensus 320 Lh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~ 377 (574)
||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|+++..
T Consensus 251 L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~ 308 (351)
T 3utm_A 251 LHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSI 308 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998763
No 9
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4e-33 Score=273.11 Aligned_cols=220 Identities=14% Similarity=0.046 Sum_probs=192.8
Q ss_pred hHHHHHHHHHHcCchhhHhhhcc----cCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccc
Q 008204 147 YVIESIYASAAFKMTEVVSVYEG----WLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEK 218 (574)
Q Consensus 147 ~~~elL~~A~~~~~~elv~~Ll~----~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~ 218 (574)
...++||+|+..|..+++++|++ .+.+++.. +.+|.||||+|+..|+.+ |+++|++++..+..|.||+|.
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 85 (241)
T 1k1a_A 8 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY--NNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHL 85 (241)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcc--cccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 35678999999999999999886 78898887 456999999999999965 778888899999999999999
Q ss_pred cCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-CC---C-CCCccHHHHHHHcC
Q 008204 219 ELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-KV---T-LDDACALHYAAAYC 293 (574)
Q Consensus 219 a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---d-~~g~tpLh~Aa~~g 293 (574)
++..+ ..+++++|++.....+.+++..+. .|.||||+|+..|+.+++++|++.| ++ + ..|.||||+|+..|
T Consensus 86 A~~~~-~~~~~~~Ll~~~~~~~~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 161 (241)
T 1k1a_A 86 ACEHR-SPTCLRALLDSAAPGTLDLEARNY---DGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENN 161 (241)
T ss_dssp HHHTT-CHHHHHHHHHHSCTTSCCTTCCCT---TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHcC-CHHHHHHHHHcCCCccccccccCc---CCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcC
Confidence 99887 788888888663222337787777 9999999999999999999999999 43 3 67999999999999
Q ss_pred CHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCC
Q 008204 294 NPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQ 373 (574)
Q Consensus 294 ~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~ 373 (574)
+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|.+.++
T Consensus 162 ~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 162 SLSMVQLLLQHG-ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp CHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred CHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 999999999998 9999999999999999999999999999999999999999999999999999999999998887764
No 10
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.6e-32 Score=274.58 Aligned_cols=245 Identities=15% Similarity=0.052 Sum_probs=190.7
Q ss_pred hHHHHHHHHHHcCchhhHhhh-------------cccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhcccccc
Q 008204 147 YVIESIYASAAFKMTEVVSVY-------------EGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARS 209 (574)
Q Consensus 147 ~~~elL~~A~~~~~~elv~~L-------------l~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~ 209 (574)
...+++|+|+..|..+.+..+ +... ++.+ +.+|.||||+|+..|+.+ |++.|++++.++
T Consensus 14 ~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~--~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~ 89 (285)
T 3d9h_A 14 LVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNP--LMGD--AVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIIT 89 (285)
T ss_dssp ----------------------------CCSEECCCCT--TCSS--SCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEEC
T ss_pred HHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCc--ccCC--CccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 456789999999885444332 2322 2333 556999999999999965 777888899999
Q ss_pred ccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C--CCCCCccHH
Q 008204 210 NIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K--VTLDDACAL 286 (574)
Q Consensus 210 ~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~--~d~~g~tpL 286 (574)
..|.||||.|+..+ ..+++++|++. |++++..|. .|+||||+|+..|+.+++++|++.| + .+..|.|||
T Consensus 90 ~~g~t~L~~A~~~g-~~~~v~~Ll~~----ga~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L 161 (285)
T 3d9h_A 90 ADHVSPLHEACLGG-HLSCVKILLKH----GAQVNGVTA---DWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPI 161 (285)
T ss_dssp TTCCCHHHHHHHTT-CHHHHHHHHHT----TCCSSCCCT---TCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHH
T ss_pred CCCCCHHHHHHHCC-cHHHHHHHHHC----CCCCCCCCC---CCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHH
Confidence 99999999999888 78899999855 999999888 9999999999999999999999999 3 456799999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHH
Q 008204 287 HYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYI 366 (574)
Q Consensus 287 h~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~ 366 (574)
|+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++++. |..|+||||+|+..|+.++++
T Consensus 162 ~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~ 239 (285)
T 3d9h_A 162 HEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELAC 239 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHH
Confidence 9999999999999999998 99999999999999999999999999999999999995 899999999999999999999
Q ss_pred HHHhcCCCccchhhHHHHHHchhccCCCCCCcccchhhhcccchhhHHHHHhcCc
Q 008204 367 EATKQGQETNKDWLCIDVLERDMTTNSTSGNLAMSSEVIDDVFQMNLDYLENRGA 421 (574)
Q Consensus 367 ~l~~~G~~~~~~~~~~~ile~~~~~~~~~~~~~~~~~~~~~~l~~~ll~le~~va 421 (574)
+|++.|+++.. ....+.+++.++..+..+..++++...+
T Consensus 240 ~Ll~~gad~~~----------------~d~~g~t~l~~A~~~~~~~~~Ll~~~~a 278 (285)
T 3d9h_A 240 LLMDFGADTQA----------------KNAEGKRPVELVPPESPLAQLFLEREGA 278 (285)
T ss_dssp HHHHTTCCTTC----------------CCTTSCCGGGGSCTTSHHHHHHHHHC--
T ss_pred HHHHCCCCCCC----------------cCCCCCCHHHHhcCccHHHHHHHHhhcc
Confidence 99999987653 1122334444455666777778877533
No 11
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=7.5e-33 Score=289.44 Aligned_cols=223 Identities=11% Similarity=0.017 Sum_probs=197.8
Q ss_pred hhHHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHhHHhhhhcccc--ccccccccccccCcch
Q 008204 146 NYVIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYPLCSFCIQRIA--RSNIDNVCLEKELPDE 223 (574)
Q Consensus 146 ~~~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~--~~~~~~t~l~~a~~~~ 223 (574)
....++||+|+..|..+++++|+++|++++.. +.+|.||||+|+..|+.++++.+++... .+..|.|+||.|+..+
T Consensus 18 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g 95 (364)
T 3ljn_A 18 DENMEKIHVAARKGQTDEVRRLIETGVSPTIQ--NRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMAN 95 (364)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc--CCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcC
Confidence 45789999999999999999999999999987 5569999999999999775444443322 2346899999999888
Q ss_pred hhHHHHHHHhhcccccCCCccc-----------------CCCCCCCCchHHHHHHHcC--CHHHHHHHHhCC-C---CCC
Q 008204 224 VSSEIKSLRVKSNQESEANIKE-----------------VDPMHEKRVRRIHKALDSD--DFELLNLLLNEY-K---VTL 280 (574)
Q Consensus 224 ~~~~i~~~L~~~~~~~ga~~n~-----------------~d~~~~~g~tpLh~A~~~g--~~~~v~~Ll~~g-~---~d~ 280 (574)
..+++++|++.....|++++. .|. .|.||||+|+..| +.++|++|++.| + .|.
T Consensus 96 -~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~ 171 (364)
T 3ljn_A 96 -KTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHC---KGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDK 171 (364)
T ss_dssp -CHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEE---SCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCT
T ss_pred -CHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCC---CCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCC
Confidence 788889888654444777776 666 8999999999999 999999999999 4 467
Q ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCC-----ccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 008204 281 DDACALHYAAAYCNPKVFKEVHNMGLAD-----INLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAI 355 (574)
Q Consensus 281 ~g~tpLh~Aa~~g~~~~v~~LL~~g~ad-----vn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~ 355 (574)
.|+||||+|+..|+.++|++||+.| ++ +|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+
T Consensus 172 ~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~ 250 (364)
T 3ljn_A 172 ADETPLMRAMEFRNREALDLMMDTV-PSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYL 250 (364)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHC-SCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcc-cccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 8999999999999999999999998 88 99999999999999999999999999999999999999999999999
Q ss_pred HHHcCChhhHHHHHhcCCCc
Q 008204 356 CRRMTRRKDYIEATKQGQET 375 (574)
Q Consensus 356 A~~~g~~~~v~~l~~~G~~~ 375 (574)
|+..|+.+++++|++.|+.+
T Consensus 251 A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 251 SVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp HHHTCCHHHHHHHHHHSCHH
T ss_pred HHHhChHHHHHHHHHcCCch
Confidence 99999999999999998754
No 12
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=5.9e-33 Score=292.13 Aligned_cols=221 Identities=17% Similarity=0.116 Sum_probs=199.1
Q ss_pred hHHHHHHHHHHcCchhhHhhhc--------ccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccc
Q 008204 147 YVIESIYASAAFKMTEVVSVYE--------GWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNV 214 (574)
Q Consensus 147 ~~~elL~~A~~~~~~elv~~Ll--------~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t 214 (574)
...++||+|+..|..+++++|+ +.|++++.. +.+|.||||+|+..|+.+ |+++|++++..+..|.|
T Consensus 124 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~--d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t 201 (373)
T 2fo1_E 124 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAM--DCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERS 201 (373)
T ss_dssp SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCC--CCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCC
Confidence 4568999999999999988876 789999987 556999999999999965 77888999999999999
Q ss_pred cccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcC---CHHHHHHHHhCC-CCC-----------
Q 008204 215 CLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSD---DFELLNLLLNEY-KVT----------- 279 (574)
Q Consensus 215 ~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g---~~~~v~~Ll~~g-~~d----------- 279 (574)
+||.|+..+ ..+++++|++.. ..+++++..|. .|.||||+|+..| +.+++++|++.| +++
T Consensus 202 ~L~~A~~~g-~~~~v~~Ll~~~-~~~~~~~~~d~---~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d 276 (373)
T 2fo1_E 202 ALHQAAANR-DFGMMVYMLNST-KLKGDIEELDR---NGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEK 276 (373)
T ss_dssp HHHHHHHTT-CHHHHHHHTTSH-HHHHTTSCCCT---TSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSS
T ss_pred HHHHHHHCC-CHHHHHHHHhcC-ccccChhhcCC---CCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCccc
Confidence 999999888 788889888441 01168888887 9999999999998 899999999999 444
Q ss_pred CCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q 008204 280 LDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRM 359 (574)
Q Consensus 280 ~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~ 359 (574)
..|+||||+|+..|+.++|++|++.+++++|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..
T Consensus 277 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~ 356 (373)
T 2fo1_E 277 YKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQAN 356 (373)
T ss_dssp CCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHT
T ss_pred ccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHc
Confidence 47999999999999999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHhcCCC
Q 008204 360 TRRKDYIEATKQGQE 374 (574)
Q Consensus 360 g~~~~v~~l~~~G~~ 374 (574)
|+.+++++|+++|++
T Consensus 357 g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 357 NHHNIVDIFDRCRPE 371 (373)
T ss_dssp TCHHHHHHHHTTC--
T ss_pred CCHHHHHHHHhcCcc
Confidence 999999999999864
No 13
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=9.8e-32 Score=277.95 Aligned_cols=246 Identities=17% Similarity=0.111 Sum_probs=159.5
Q ss_pred HHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccc-------------
Q 008204 148 VIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSN------------- 210 (574)
Q Consensus 148 ~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~------------- 210 (574)
..++|+.|+..|..++|++|+++|+++|.++ .++|.||||+|+..|+.+ |+++|++++.++.
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~-~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQE-EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCccC-CCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence 4678999999999999999999999998752 235899999999999966 6666666655544
Q ss_pred --------------------cccccccccCcchhhHHHHHHHhhcccccCCCcccCCC-------CCCCCchHHHHHHHc
Q 008204 211 --------------------IDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDP-------MHEKRVRRIHKALDS 263 (574)
Q Consensus 211 --------------------~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~-------~~~~g~tpLh~A~~~ 263 (574)
.|.||++.++..+ ..++++++++. |++++..+. .+..|.||||+|+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~-~~~~~~~ll~~----ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~ 178 (337)
T 4g8k_A 104 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYG-KVKALKFLYKR----GANVNLRRKTKEDQERLRKGGATALMDAAEK 178 (337)
T ss_dssp CHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTT-CHHHHHHHHHT----TCCTTCCCCCC-----CTTCSCCHHHHHHHH
T ss_pred cchhhHHhhhccchhhhhccCCCCHHHHHHHcC-cHHHHHHHHHc----CCCcchhhccccccccccCCCCcHHHHHHHC
Confidence 4455555554444 44555555533 555554332 123456666666666
Q ss_pred CCHHHHHHHHhC-C-C---CCCCCccHHHHHHHcCC----HHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 008204 264 DDFELLNLLLNE-Y-K---VTLDDACALHYAAAYCN----PKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVV 334 (574)
Q Consensus 264 g~~~~v~~Ll~~-g-~---~d~~g~tpLh~Aa~~g~----~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~ 334 (574)
|+.++|++||++ | + .|..|.|+||+++..+. ..++++|+++| +++|.+|..|+||||+|+..|+.+++++
T Consensus 179 g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~g-ad~n~~d~~g~t~L~~a~~~~~~~~v~~ 257 (337)
T 4g8k_A 179 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQR 257 (337)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTT-CCTTCCCGGGCCHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhhhhHHHHH
Confidence 666666666643 4 2 23456666665554332 23555566665 6666666667777777777777777776
Q ss_pred HHhC-CCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCccchhhHHHHHHchhccCCCCCCcccchhhhcccchhhH
Q 008204 335 LLSK-GACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETNKDWLCIDVLERDMTTNSTSGNLAMSSEVIDDVFQMNL 413 (574)
Q Consensus 335 LL~~-GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~~~~~~~ile~~~~~~~~~~~~~~~~~~~~~~l~~~l 413 (574)
|++. |+++|.+|.+|+||||+|+..|+.+++++|+++|++++.. .++..++..++..+..
T Consensus 258 Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-------------------~~L~~A~~~~~~~iv~ 318 (337)
T 4g8k_A 258 LLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-------------------DLVMTARRNYDHSLVK 318 (337)
T ss_dssp HHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-------------------CHHHHHHHTTCHHHHH
T ss_pred HHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-------------------CHHHHHHHcCCHHHHH
Confidence 6663 6677777777777777777777777777777766655421 2444555566667777
Q ss_pred HHHHhc
Q 008204 414 DYLENR 419 (574)
Q Consensus 414 l~le~~ 419 (574)
++|++|
T Consensus 319 ~Ll~~G 324 (337)
T 4g8k_A 319 VLLSHG 324 (337)
T ss_dssp HHHHTT
T ss_pred HHHHCc
Confidence 777777
No 14
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.4e-32 Score=267.37 Aligned_cols=211 Identities=15% Similarity=0.146 Sum_probs=191.4
Q ss_pred HHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcch
Q 008204 148 VIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDE 223 (574)
Q Consensus 148 ~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~ 223 (574)
..++||.|+..|..+++++|+++|++++.. +.+|.||||+|+..|+.+ |+++|++++.++..|.|++|.++..+
T Consensus 11 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 88 (237)
T 3b7b_A 11 KRSPLHAAAEAGHVDICHMLVQAGANIDTC--SEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKG 88 (237)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCcCcc--CCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Confidence 457899999999999999999999999887 556999999999999966 66778888888999999999999887
Q ss_pred hhHHHHHHHhhcccccC-CCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHH
Q 008204 224 VSSEIKSLRVKSNQESE-ANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVF 298 (574)
Q Consensus 224 ~~~~i~~~L~~~~~~~g-a~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v 298 (574)
..+++++|++. | ++++..+. .|.||||+|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++
T Consensus 89 -~~~~~~~Ll~~----~~~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 160 (237)
T 3b7b_A 89 -HYEVVQYLLSN----GQMDVNCQDD---GGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIA 160 (237)
T ss_dssp -CHHHHHHHHTT----TCCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHH
T ss_pred -CHHHHHHHHhC----CCCCcccCCC---CCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHH
Confidence 78888988854 5 78888887 9999999999999999999999999 3 467899999999999999999
Q ss_pred HHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHH
Q 008204 299 KEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEAT 369 (574)
Q Consensus 299 ~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~ 369 (574)
++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..++...+..+.
T Consensus 161 ~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~ 230 (237)
T 3b7b_A 161 EILLAAK-CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMS 230 (237)
T ss_dssp HHHHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred HHHHHcC-CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999998 999999999999999999999999999999999999999999999999999999876554443
No 15
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.9e-32 Score=267.01 Aligned_cols=214 Identities=19% Similarity=0.099 Sum_probs=195.0
Q ss_pred HHHHHHHHcCchhhHhhhcccCccc-chhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcchh
Q 008204 150 ESIYASAAFKMTEVVSVYEGWLLKV-VREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDEV 224 (574)
Q Consensus 150 elL~~A~~~~~~elv~~Ll~~gadv-n~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~~ 224 (574)
.+|+.|+..|..+.+++++..+... +.. +.+|.||||+|+..|+.+ |+++|++++.++..|.||||.|+..+
T Consensus 8 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~- 84 (231)
T 3aji_A 8 IMICNLAYSGKLDELKERILADKSLATRT--DQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAG- 84 (231)
T ss_dssp SHHHHHHHHTCHHHHHHHHHHCGGGGGCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT-
T ss_pred chHHHHHHhCCHHHHHHHHHhchhhhhcC--CCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcC-
Confidence 4699999999999999988876553 333 556999999999999965 77788889999999999999999887
Q ss_pred hHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHH
Q 008204 225 SSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKE 300 (574)
Q Consensus 225 ~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~ 300 (574)
..+++++|++. |++++..|. .|.||||+|+..|+.+++++|++.| + .|..|.||||+|+..|+.+++++
T Consensus 85 ~~~~v~~Ll~~----g~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 157 (231)
T 3aji_A 85 XDEIVKALLVK----GAHVNAVNQ---NGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHI 157 (231)
T ss_dssp CHHHHHHHHHT----TCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHc----CCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 78899999854 999999887 9999999999999999999999999 3 46789999999999999999999
Q ss_pred HHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCC
Q 008204 301 VHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQE 374 (574)
Q Consensus 301 LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~ 374 (574)
|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|.+.|++
T Consensus 158 Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 158 LLFYK-ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp HHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred HHhcC-CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 99998 99999999999999999999999999999999999999999999999999999999999999988754
No 16
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.98 E-value=6.7e-32 Score=261.71 Aligned_cols=208 Identities=17% Similarity=0.081 Sum_probs=187.1
Q ss_pred CchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcchhhHHHHHHHhh
Q 008204 159 KMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVK 234 (574)
Q Consensus 159 ~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~ 234 (574)
|..+++++|+++|++++... +.+|.||||+|+..|+.+ |+++|++++..+..|.||||.|+..+ ..+++++|++
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~ 79 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQT-DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSAD-AQGVFQILIR 79 (223)
T ss_dssp ---CCEETTEETTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCccccc-CCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC-CHHHHHHHHH
Confidence 56788999999999987641 456999999999999965 77788889999999999999998888 7888888885
Q ss_pred cccccCC-CcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCc
Q 008204 235 SNQESEA-NIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADI 309 (574)
Q Consensus 235 ~~~~~ga-~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~adv 309 (574)
. |+ +++..+. .|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| +++
T Consensus 80 ~----~~~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~ 151 (223)
T 2f8y_A 80 N----RATDLDARMH---DGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANK 151 (223)
T ss_dssp B----TTSCTTCCCT---TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT-CCT
T ss_pred c----CCCCcccCCC---CCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCC
Confidence 4 55 7777777 9999999999999999999999998 3 4678999999999999999999999998 999
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 008204 310 NLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETN 376 (574)
Q Consensus 310 n~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 376 (574)
+.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|.++|....
T Consensus 152 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 152 DMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred CCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999998543
No 17
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.98 E-value=3.7e-32 Score=272.40 Aligned_cols=206 Identities=15% Similarity=0.080 Sum_probs=166.9
Q ss_pred HHHHHHHHHHcCchhhHhhhcccCcc---cchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccC
Q 008204 148 VIESIYASAAFKMTEVVSVYEGWLLK---VVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKEL 220 (574)
Q Consensus 148 ~~elL~~A~~~~~~elv~~Ll~~gad---vn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~ 220 (574)
+.++||+|+..|..+++++|+++|++ ++.+ +..|.||||+|+..|+.+ |+++|++++.++..|.||||.|+
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~ 86 (282)
T 1oy3_D 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ--NDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLAC 86 (282)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHT
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCccccccc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 46799999999999999999999988 5555 556999999999999955 78889999999999999999999
Q ss_pred cchhhHHHHHHHhhccc-------------------------------------------ccCCCcccCCCCCCCCchHH
Q 008204 221 PDEVSSEIKSLRVKSNQ-------------------------------------------ESEANIKEVDPMHEKRVRRI 257 (574)
Q Consensus 221 ~~~~~~~i~~~L~~~~~-------------------------------------------~~ga~~n~~d~~~~~g~tpL 257 (574)
..+ ..+++++|++... ..+++++..+. .|.|||
T Consensus 87 ~~~-~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~t~L 162 (282)
T 1oy3_D 87 RVR-AHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY---DGHTPL 162 (282)
T ss_dssp TTT-CHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCT---TSCCHH
T ss_pred HcC-CcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCC---CCcCHH
Confidence 888 7888888875311 01233555555 999999
Q ss_pred HHHHHcCCHHHHHHHHhCC-CCC----CCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHH
Q 008204 258 HKALDSDDFELLNLLLNEY-KVT----LDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVM 332 (574)
Q Consensus 258 h~A~~~g~~~~v~~Ll~~g-~~d----~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v 332 (574)
|+|+..|+.+++++|++.| +++ ..|+||||+|+..|+.++|++||++| +++|.+|..|+||||+|+.+|+.+++
T Consensus 163 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~~v 241 (282)
T 1oy3_D 163 HVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG-ADPTARMYGGRTPLGSALLRPNPILA 241 (282)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHTSSCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCCcccccCCCCHHHHHHHcCCcHHH
Confidence 9999999999999999999 443 34999999999999999999999998 99999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q 008204 333 VVLLSKGACSSETTPDGQTAVAICRRMT 360 (574)
Q Consensus 333 ~~LL~~GAdvn~~d~~G~TpL~~A~~~g 360 (574)
++|+++||+++.+|..|.|||++|....
T Consensus 242 ~~Ll~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 242 RLLRAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHHTTCCCCCCC--------------
T ss_pred HHHHHcCCCcCcCCCcccccccccCCcc
Confidence 9999999999999999999999998654
No 18
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.98 E-value=4e-32 Score=275.04 Aligned_cols=212 Identities=16% Similarity=0.071 Sum_probs=192.1
Q ss_pred HHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcch
Q 008204 148 VIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDE 223 (574)
Q Consensus 148 ~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~ 223 (574)
..++||.|+..|..+++++|+++|++++.+ +.+|.||||+|+..|+.+ |+++|++++.++..|.|||+.|+..+
T Consensus 59 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~ 136 (285)
T 3d9h_A 59 DWSPMHEAAIHGHQLSLRNLISQGWAVNII--TADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSG 136 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCSCEE--CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 467899999999999999999999999987 556999999999999965 77888899999999999999999888
Q ss_pred hhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHH
Q 008204 224 VSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFK 299 (574)
Q Consensus 224 ~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~ 299 (574)
..+++++|++. |++++..+ .|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.++++
T Consensus 137 -~~~~v~~Ll~~----g~~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~ 207 (285)
T 3d9h_A 137 -SWDCVNLLLQH----GASVQPES----DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVK 207 (285)
T ss_dssp -CHHHHHHHHHT----TCCSSCSC----TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHH
T ss_pred -HHHHHHHHHHC----CCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 78899999855 88887543 6999999999999999999999999 4 4678999999999999999999
Q ss_pred HHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhc-CCC
Q 008204 300 EVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQ-GQE 374 (574)
Q Consensus 300 ~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~-G~~ 374 (574)
+|++.| +++|. |..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+ ++.+++++|+++ |++
T Consensus 208 ~Ll~~g-a~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~ 279 (285)
T 3d9h_A 208 KLLESG-ADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGAS 279 (285)
T ss_dssp HHHHTT-CCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC---
T ss_pred HHHHCC-CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccC
Confidence 999998 99995 899999999999999999999999999999999999999999999 567899999988 543
No 19
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=2.5e-31 Score=266.34 Aligned_cols=189 Identities=19% Similarity=0.168 Sum_probs=173.4
Q ss_pred ccCCchHHHHHHHcCCHh----HHhhhhc---cccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCC
Q 008204 180 VEDVIPILVAALQCQLYP----LCSFCIQ---RIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEK 252 (574)
Q Consensus 180 ~~~g~t~L~~A~~~g~~~----Ll~~ga~---~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~ 252 (574)
+.+|.||||+|+..|+.+ |++++++ ++.++..|.||||.|+..+ ..+++++|++. |++++..|. .
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~----ga~~~~~~~---~ 77 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILG-EASTVEKLYAA----GAGVLVAER---G 77 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHT-CHHHHHHHHHT----TCCSSCCCT---T
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcC-CHHHHHHHHHc----CCCCCCCCC---C
Confidence 456999999999999966 5566666 7888899999999999888 78999999855 999999888 9
Q ss_pred CchHHHHHHHcCCHHHHHHHHhCC-C--------------------------------------------------CCCC
Q 008204 253 RVRRIHKALDSDDFELLNLLLNEY-K--------------------------------------------------VTLD 281 (574)
Q Consensus 253 g~tpLh~A~~~g~~~~v~~Ll~~g-~--------------------------------------------------~d~~ 281 (574)
|+||||+|+..|+.+++++|++.| . .+..
T Consensus 78 g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (282)
T 1oy3_D 78 GHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYD 157 (282)
T ss_dssp SCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTT
T ss_pred CCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCC
Confidence 999999999999999999999976 1 2457
Q ss_pred CccHHHHHHHcCCHHHHHHHHHcCCCCccccCCC-CChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q 008204 282 DACALHYAAAYCNPKVFKEVHNMGLADINLKDAR-GRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMT 360 (574)
Q Consensus 282 g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~-G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g 360 (574)
|+||||+|+..|+.+++++|++.| +++|.++.. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 158 g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~ 236 (282)
T 1oy3_D 158 GHTPLHVAVIHKDAEMVRLLRDAG-ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP 236 (282)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSS
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcC
Confidence 999999999999999999999999 999999865 999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHhcCCCccc
Q 008204 361 RRKDYIEATKQGQETNK 377 (574)
Q Consensus 361 ~~~~v~~l~~~G~~~~~ 377 (574)
+.+++++|+++|+++..
T Consensus 237 ~~~~v~~Ll~~ga~~~~ 253 (282)
T 1oy3_D 237 NPILARLLRAHGAPEPE 253 (282)
T ss_dssp CHHHHHHHHHTTCCCCC
T ss_pred CcHHHHHHHHcCCCcCc
Confidence 99999999999998873
No 20
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=4.9e-31 Score=263.21 Aligned_cols=212 Identities=17% Similarity=0.091 Sum_probs=183.7
Q ss_pred CCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHH
Q 008204 182 DVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 257 (574)
Q Consensus 182 ~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpL 257 (574)
+|.||||+|+..|+.+ |++.|++++.++..|.||||.|+..+ ..+++++|++. |++++..|. .|+|||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~----g~~~~~~~~---~g~t~L 73 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGG-HLSCVKILLKH----GAQVNGVTA---DWHTPL 73 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHT-CHHHHHHHHHT----TCCTTCCCT---TSCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC-CHHHHHHHHHC----CCCCCCCCC---CCCCHH
Confidence 4899999999999965 77888899999999999999999888 78899999855 999999988 999999
Q ss_pred HHHHHcCCHHHHHHHHhCC-C--CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 008204 258 HKALDSDDFELLNLLLNEY-K--VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVV 334 (574)
Q Consensus 258 h~A~~~g~~~~v~~Ll~~g-~--~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~ 334 (574)
|+|+..|+.+++++|++.| + .+.+|.||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 152 (261)
T 2xai_A 74 FNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKK 152 (261)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHhCCHHHHHH
Confidence 9999999999999999999 3 4567999999999999999999999998 9999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCccchhhHHHHHHchhccCCCCCCcccchhhhcccchhhHH
Q 008204 335 LLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETNKDWLCIDVLERDMTTNSTSGNLAMSSEVIDDVFQMNLD 414 (574)
Q Consensus 335 LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~~~~~~~ile~~~~~~~~~~~~~~~~~~~~~~l~~~ll 414 (574)
|+++|++++. |..|+||||+|+..|+.+++++|++.|++++... ..|.++ +..+.....+..+
T Consensus 153 Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d--------------~~g~tp--l~~A~~~~~~~~~ 215 (261)
T 2xai_A 153 LLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKN--------------AEGKRP--VELVPPESPLAQL 215 (261)
T ss_dssp HHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCC--------------TTSCCG--GGGSCTTCTHHHH
T ss_pred HHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcC--------------CCCCCh--hhhccccccHHHH
Confidence 9999999995 8999999999999999999999999998765311 123344 4444445556666
Q ss_pred HHHhc
Q 008204 415 YLENR 419 (574)
Q Consensus 415 ~le~~ 419 (574)
+++.+
T Consensus 216 ll~~~ 220 (261)
T 2xai_A 216 FLERE 220 (261)
T ss_dssp HHHC-
T ss_pred HHhcc
Confidence 66654
No 21
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=2.1e-31 Score=264.41 Aligned_cols=221 Identities=16% Similarity=0.082 Sum_probs=164.4
Q ss_pred ccchhccccCCchHHHHHHHcC-------------CHh----HHhhhhccccc-cccccccccccCcchhhHHHHHHHhh
Q 008204 173 KVVREALVEDVIPILVAALQCQ-------------LYP----LCSFCIQRIAR-SNIDNVCLEKELPDEVSSEIKSLRVK 234 (574)
Q Consensus 173 dvn~~~~~~~g~t~L~~A~~~g-------------~~~----Ll~~ga~~~~~-~~~~~t~l~~a~~~~~~~~i~~~L~~ 234 (574)
|+|.+ +.+|.||||+|+..| ..+ |++.|.+++.. +..|.||||.|+..+ ..+++++|++
T Consensus 2 dvn~~--d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g-~~~~v~~Ll~ 78 (253)
T 1yyh_A 2 DVNVR--GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYS-RSDAAKRLLE 78 (253)
T ss_dssp ----------------------------------------------------CCCTTSCCHHHHHHHTT-CHHHHHHHHH
T ss_pred CCCCC--CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcC-CHHHHHHHHH
Confidence 56666 556999999999987 433 77778887654 788999999999888 7889999985
Q ss_pred cccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC--C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCc
Q 008204 235 SNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY--K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADI 309 (574)
Q Consensus 235 ~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g--~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~adv 309 (574)
. |++++..|. .|+||||+|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++++|++.| +++
T Consensus 79 ~----g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~ 150 (253)
T 1yyh_A 79 A----SADANIQDN---MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADV 150 (253)
T ss_dssp T----TCCTTCCCT---TSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTT-CCT
T ss_pred c----CCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcC-CCC
Confidence 5 999999888 9999999999999999999999998 2 3578999999999999999999999998 999
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCccchhhHHHHHHchh
Q 008204 310 NLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETNKDWLCIDVLERDM 389 (574)
Q Consensus 310 n~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~~~~~~~ile~~~ 389 (574)
|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+++....
T Consensus 151 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d---------- 220 (253)
T 1yyh_A 151 NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITD---------- 220 (253)
T ss_dssp TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC----------
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccc----------
Confidence 9999999999999999999999999999999999999999999999999999999999999998765311
Q ss_pred ccCCCCCCcccchhhhcccchhhHHHHHh
Q 008204 390 TTNSTSGNLAMSSEVIDDVFQMNLDYLEN 418 (574)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~~~ll~le~ 418 (574)
..+.+++.++...+...+..++...
T Consensus 221 ----~~g~tpl~~A~~~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 221 ----HMDRLPRDIAQERMHHDIVRLLDLE 245 (253)
T ss_dssp ----TTCCCHHHHHHHTTCHHHHHHHHC-
T ss_pred ----cCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 2245555566666665555554433
No 22
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=3.4e-31 Score=257.40 Aligned_cols=209 Identities=15% Similarity=0.051 Sum_probs=173.4
Q ss_pred HHHHHHHHHcCchhhHhhhcccCcccch-hccccCCchHHHHHHHcCCHh----HHhhh--hcccc-ccccccccccccC
Q 008204 149 IESIYASAAFKMTEVVSVYEGWLLKVVR-EALVEDVIPILVAALQCQLYP----LCSFC--IQRIA-RSNIDNVCLEKEL 220 (574)
Q Consensus 149 ~elL~~A~~~~~~elv~~Ll~~gadvn~-~~~~~~g~t~L~~A~~~g~~~----Ll~~g--a~~~~-~~~~~~t~l~~a~ 220 (574)
.++||.|+..|..+++++|++.+.+.+. . +.+|.||||+|+..|+.+ |++++ .+++. .+..|.||+|.++
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~ 80 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLLQK--DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 80 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccccC--CCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 3589999999999999999999988765 4 566999999999999966 55666 44444 6678889998888
Q ss_pred cchhhHHHHHHHhhcccccC--CCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCC
Q 008204 221 PDEVSSEIKSLRVKSNQESE--ANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCN 294 (574)
Q Consensus 221 ~~~~~~~i~~~L~~~~~~~g--a~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~ 294 (574)
..+ ..+++++|++. | ++++..+. .|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+
T Consensus 81 ~~~-~~~~~~~Ll~~----g~~~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 152 (228)
T 2dzn_A 81 SVG-NLEVVKSLYDR----PLKPDLNKITN---QGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGS 152 (228)
T ss_dssp HHC-CHHHHHHHHSS----SSCCCTTCCCT---TCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC
T ss_pred HcC-CHHHHHHHHhC----CCCcccccCCc---CCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 777 67788888744 5 77777776 8999999999999999999999988 3 35778999999999999
Q ss_pred HHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHh
Q 008204 295 PKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLL-SKGACSSETTPDGQTAVAICRRMTRRKDYIEATK 370 (574)
Q Consensus 295 ~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL-~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~ 370 (574)
.+++++|++.|.+++|.+|..|+||||+|+..|+.+++++|+ ++|++++.+|.+|+||||+|+.. .+++++.+
T Consensus 153 ~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 153 LKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp HHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred HHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 999999998887889999999999999999999999999999 78999999999999999998643 44444443
No 23
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=2e-30 Score=268.18 Aligned_cols=219 Identities=15% Similarity=0.067 Sum_probs=183.6
Q ss_pred HHHHHHHHHHcCchhhHhhhcccCcccchhc-------------------------------cccCCchHHHHHHHcCCH
Q 008204 148 VIESIYASAAFKMTEVVSVYEGWLLKVVREA-------------------------------LVEDVIPILVAALQCQLY 196 (574)
Q Consensus 148 ~~elL~~A~~~~~~elv~~Ll~~gadvn~~~-------------------------------~~~~g~t~L~~A~~~g~~ 196 (574)
+.++||+|+..|..+++++|+++|++++.++ .+..|.||||+|+..|+.
T Consensus 59 g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~ 138 (337)
T 4g8k_A 59 GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV 138 (337)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCH
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcH
Confidence 4679999999999999999999998765422 134589999999999996
Q ss_pred h----HHhhhhccccccccc----cccccccCcchhh-----HHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHc
Q 008204 197 P----LCSFCIQRIARSNID----NVCLEKELPDEVS-----SEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDS 263 (574)
Q Consensus 197 ~----Ll~~ga~~~~~~~~~----~t~l~~a~~~~~~-----~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~ 263 (574)
+ |+++|++++...... .....+.++++++ .+++++|+.. .|+++|..|. .|.|++|.++..
T Consensus 139 ~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~---~gad~n~~d~---~g~t~l~~~~~~ 212 (337)
T 4g8k_A 139 KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE---MGADVNACDN---MGRNALIHALLS 212 (337)
T ss_dssp HHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHH---SCCCTTCCCT---TSCCHHHHHHHH
T ss_pred HHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhc---cCCCcCccCC---CCCcHHHHHHHH
Confidence 6 667777777654433 2233466777765 5788888832 3999999998 999999998876
Q ss_pred CC----HHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 008204 264 DD----FELLNLLLNEY-KV---TLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVL 335 (574)
Q Consensus 264 g~----~~~v~~Ll~~g-~~---d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~L 335 (574)
++ ..++++|+++| ++ |..|+||||+|+..|+.++++.|+..+++++|.+|..|+||||+|+..|+.++|++|
T Consensus 213 ~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~L 292 (337)
T 4g8k_A 213 SDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELL 292 (337)
T ss_dssp SCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred cCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 54 46889999999 44 577999999999999999999999986799999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCccc
Q 008204 336 LSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETNK 377 (574)
Q Consensus 336 L~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~ 377 (574)
|++|||+|. .||||+|+..|+.++|++|+++|++++.
T Consensus 293 l~~GAd~n~-----~~~L~~A~~~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 293 CKRGASTDC-----GDLVMTARRNYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp HTTSCSSTT-----CCHHHHHHHTTCHHHHHHHHHTTCCC--
T ss_pred HHCCCCCCC-----CCHHHHHHHcCCHHHHHHHHHCcCCCCC
Confidence 999999975 4699999999999999999999998873
No 24
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=5.6e-31 Score=256.82 Aligned_cols=218 Identities=15% Similarity=0.099 Sum_probs=193.6
Q ss_pred hHHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhcccccc-ccccccccccCc
Q 008204 147 YVIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARS-NIDNVCLEKELP 221 (574)
Q Consensus 147 ~~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~-~~~~t~l~~a~~ 221 (574)
+...+|+.|+..|..+++++|++.|++++.. +.+|.||||+|+..|+.+ |++.+.+++... ..+.|+++.++.
T Consensus 8 ~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~ 85 (240)
T 3eu9_A 8 YSTWDIVKATQYGIYERCRELVEAGYDVRQP--DKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATR 85 (240)
T ss_dssp GGGCCHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHH
T ss_pred ccchHHHHHHHcCChHHHHHHHHcCCCcCCC--CCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHH
Confidence 3456799999999999999999999999887 456999999999999976 555666665444 348999999988
Q ss_pred chhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCC-HH
Q 008204 222 DEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCN-PK 296 (574)
Q Consensus 222 ~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~-~~ 296 (574)
.+ ..+++++|++. |++++..+. .|.||||+|+..|+.+++++|++.| + .+..|.||||+|+..++ .+
T Consensus 86 ~~-~~~~v~~Ll~~----g~~~~~~~~---~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 157 (240)
T 3eu9_A 86 QG-HLSMVVQLMKY----GADPSLIDG---EGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVD 157 (240)
T ss_dssp HT-CHHHHHHHHHT----TCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSST
T ss_pred cC-CHHHHHHHHHc----CCCCcccCC---CCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHH
Confidence 87 78888998855 999999887 9999999999999999999999999 3 46789999999997776 78
Q ss_pred HHHHHHHcCCCCccccCC-CCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCc
Q 008204 297 VFKEVHNMGLADINLKDA-RGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQET 375 (574)
Q Consensus 297 ~v~~LL~~g~advn~~d~-~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~ 375 (574)
++++|++.| ++++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|.+.|...
T Consensus 158 ~~~~L~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 158 PTRLLLTFN-VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp THHHHHHTT-CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred HHHHHHhcC-CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 999999998 99999997 8999999999999999999999999999999999999999999999999999999998754
No 25
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=3.2e-31 Score=278.91 Aligned_cols=245 Identities=16% Similarity=0.108 Sum_probs=211.5
Q ss_pred HHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----H--------Hhhhhcccccccccccc
Q 008204 148 VIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----L--------CSFCIQRIARSNIDNVC 215 (574)
Q Consensus 148 ~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----L--------l~~ga~~~~~~~~~~t~ 215 (574)
..++||.|+..+. +++++|+.. +++.++ ..+|.||||+|+..|+.+ | ++.|++++.++..|.||
T Consensus 94 g~t~L~~Aa~~~~-~~~~~L~~~--~~n~~d-~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~Tp 169 (373)
T 2fo1_E 94 SPIKLHTEAAGSY-AITEPITRE--SVNIID-PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTP 169 (373)
T ss_dssp CCCHHHHHHHSSS-CCCSCCSTT--TTTTCC-CSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCH
T ss_pred CccHHHHHhcCCc-hHHHHhccc--cccccC-CcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCH
Confidence 4568999999664 788888764 444442 256999999999999843 3 37899999999999999
Q ss_pred ccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC----C---CCCCCccHHHH
Q 008204 216 LEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY----K---VTLDDACALHY 288 (574)
Q Consensus 216 l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g----~---~d~~g~tpLh~ 288 (574)
||.|+..+ ..+++++|++. |++++..|. .|.||||+|+..|+.+++++|++.| + .|..|+||||+
T Consensus 170 L~~A~~~g-~~~iv~~Ll~~----ga~~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~ 241 (373)
T 2fo1_E 170 LMLAVLAR-RRRLVAYLMKA----GADPTIYNK---SERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMI 241 (373)
T ss_dssp HHHHHHHT-CHHHHHHHHHT----TCCSCCCCT---TCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHH
T ss_pred HHHHHHcC-hHHHHHHHHHC----CCCCcccCC---CCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHH
Confidence 99999888 78899999855 999999888 9999999999999999999999986 2 46889999999
Q ss_pred HHHcC---CHHHHHHHHHcCCCCccc--------cCCCCChHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCcHHHHH
Q 008204 289 AAAYC---NPKVFKEVHNMGLADINL--------KDARGRTVLHVAARRKEPEVMVVLLSKG-ACSSETTPDGQTAVAIC 356 (574)
Q Consensus 289 Aa~~g---~~~~v~~LL~~g~advn~--------~d~~G~TpLh~Aa~~g~~~~v~~LL~~G-Advn~~d~~G~TpL~~A 356 (574)
|+..+ +.+++++|++.| ++++. .|..|+||||+|+..|+.++|++|+++| ++++.+|.+|+||||+|
T Consensus 242 A~~~~~~~~~~~v~~Ll~~g-~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A 320 (373)
T 2fo1_E 242 VAHNEGRDQVASAKLLVEKG-AKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLA 320 (373)
T ss_dssp HHHSCSTTHHHHHHHHHHHT-CCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHH
T ss_pred HHHhCCcchHHHHHHHHHCC-CCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHH
Confidence 99998 899999999998 99986 6779999999999999999999999875 99999999999999999
Q ss_pred HHcCChhhHHHHHhcCCCccchhhHHHHHHchhccCCCCCCcccchhhhcccchhhHHHHHhc
Q 008204 357 RRMTRRKDYIEATKQGQETNKDWLCIDVLERDMTTNSTSGNLAMSSEVIDDVFQMNLDYLENR 419 (574)
Q Consensus 357 ~~~g~~~~v~~l~~~G~~~~~~~~~~~ile~~~~~~~~~~~~~~~~~~~~~~l~~~ll~le~~ 419 (574)
+..|+.+++++|++.|++++.. ...+.+++.+++..+...+..++++++
T Consensus 321 ~~~g~~~iv~~Ll~~gad~~~~--------------d~~g~t~l~~A~~~g~~~iv~~Ll~~~ 369 (373)
T 2fo1_E 321 AQEGRIEVVMYLIQQGASVEAV--------------DATDHTARQLAQANNHHNIVDIFDRCR 369 (373)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCC--------------CSSSCCHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHHcCCCccCC--------------CCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 9999999999999999876631 123566777777777888888888776
No 26
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=3.2e-30 Score=252.27 Aligned_cols=193 Identities=18% Similarity=0.159 Sum_probs=177.8
Q ss_pred ccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCC
Q 008204 173 KVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDP 248 (574)
Q Consensus 173 dvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~ 248 (574)
+++.+ +.+|.||||+|+..|+.+ |+++|++++..+..|.||||.|+..+ ..+++++|++. |++++..+.
T Consensus 3 ~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~----g~~~~~~~~ 75 (237)
T 3b7b_A 3 NFKME--HQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENN-HLEAVKYLIKA----GALVDPKDA 75 (237)
T ss_dssp CCCCS--SCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT-CHHHHHHHHTT----TCCCCCCCT
T ss_pred Ccccc--cCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhC-CHHHHHHHHhC----CCCCCCCCC
Confidence 34444 567999999999999965 77888889999999999999999888 78899999854 999999887
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhCC--C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHH
Q 008204 249 MHEKRVRRIHKALDSDDFELLNLLLNEY--K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVA 323 (574)
Q Consensus 249 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~g--~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~A 323 (574)
.|.||||+|+..|+.+++++|++.| + .+..|+||||+|+..|+.+++++|++.| ++++.+|..|.||||+|
T Consensus 76 ---~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A 151 (237)
T 3b7b_A 76 ---EGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG-SDINIRDNEENICLHWA 151 (237)
T ss_dssp ---TSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHH
T ss_pred ---CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCccCCCCCCHHHHH
Confidence 9999999999999999999999998 2 3577999999999999999999999998 99999999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 008204 324 ARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETN 376 (574)
Q Consensus 324 a~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 376 (574)
+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|++.|+++.
T Consensus 152 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 204 (237)
T 3b7b_A 152 AFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT 204 (237)
T ss_dssp HHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred HHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999998765
No 27
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=261.38 Aligned_cols=188 Identities=19% Similarity=0.096 Sum_probs=148.0
Q ss_pred CCchHHHHHHHcCCHhHHhhhhc------------cccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCC
Q 008204 182 DVIPILVAALQCQLYPLCSFCIQ------------RIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPM 249 (574)
Q Consensus 182 ~g~t~L~~A~~~g~~~Ll~~ga~------------~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~ 249 (574)
.+.++|+.|+..|+.++++.+++ ++..+..+.|+++.++.......++++|++ .|+++|..|.
T Consensus 10 ~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~----~Gadvn~~d~- 84 (269)
T 4b93_B 10 REVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPA----SGLGVNVTSQ- 84 (269)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTCC--------------------------------------------CCCCTTCCCT-
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHH----CCCCCCCcCC-
Confidence 37899999999999886666554 344556688899988876655667777764 4999999998
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHH
Q 008204 250 HEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAAR 325 (574)
Q Consensus 250 ~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~ 325 (574)
+|+||||+|+..|+.++|++|++.| + .+.+|.||||+|+..++.++++.|++.| +++|.+|..|+||||+||.
T Consensus 85 --~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~n~~d~~g~TpL~~A~~ 161 (269)
T 4b93_B 85 --DGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSN-AKPNKKDLSGNTPLIYACS 161 (269)
T ss_dssp --TSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTCCCHHHHHHH
T ss_pred --CCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHH
Confidence 9999999999999999999999999 3 4678999999999999999999999998 9999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCccc
Q 008204 326 RKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETNK 377 (574)
Q Consensus 326 ~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~ 377 (574)
.|+.++|++||++|+++|.+|..|+||||+|+..|+.+++++|++.|++++.
T Consensus 162 ~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~ 213 (269)
T 4b93_B 162 GGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV 213 (269)
T ss_dssp TTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred CCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 9999999999999999999999999999999999999999999999987763
No 28
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=2.3e-30 Score=267.07 Aligned_cols=215 Identities=21% Similarity=0.144 Sum_probs=191.5
Q ss_pred hHHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcc
Q 008204 147 YVIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPD 222 (574)
Q Consensus 147 ~~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~ 222 (574)
...++||+|+..+..+++++|+++|++++.+ +.+|.||||+|+..|+.+ |+++|++++..+..|.||||.|+..
T Consensus 57 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 134 (351)
T 3utm_A 57 RKSTPLHLAAGYNRVRIVQLLLQHGADVHAK--DKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASK 134 (351)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc--CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 3567999999999999999999999999987 556999999999999965 7788889999999999999999988
Q ss_pred hhhHHHHHHHhhcccccCCCcccCCC---------------------------------------------------CCC
Q 008204 223 EVSSEIKSLRVKSNQESEANIKEVDP---------------------------------------------------MHE 251 (574)
Q Consensus 223 ~~~~~i~~~L~~~~~~~ga~~n~~d~---------------------------------------------------~~~ 251 (574)
+ ..+++++|++. |++++..+. .+.
T Consensus 135 ~-~~~~v~~Ll~~----g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 209 (351)
T 3utm_A 135 N-RVEVCSLLLSH----GADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQ 209 (351)
T ss_dssp T-CHHHHHHHHHT----TCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTT
T ss_pred C-CHHHHHHHHHc----CCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCC
Confidence 7 78899999855 888876552 234
Q ss_pred CCchHHHHHHHc---CCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHH
Q 008204 252 KRVRRIHKALDS---DDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAA 324 (574)
Q Consensus 252 ~g~tpLh~A~~~---g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa 324 (574)
.|.||||+|+.. +..+++++|++.| + .|..|+||||+|+..|+.+++++|+++| +++|.+|..|+||||+|+
T Consensus 210 ~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~n~~d~~g~t~L~~A~ 288 (351)
T 3utm_A 210 SHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHG-AKMNALDSLGQTALHRAA 288 (351)
T ss_dssp TCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHH
Confidence 688999999999 5689999999999 4 4678999999999999999999999998 999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCC
Q 008204 325 RRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQ 373 (574)
Q Consensus 325 ~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~ 373 (574)
..|+.+++++|+++|++++.+|..|+||+|+| +..+++++.+.+.
T Consensus 289 ~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~ 333 (351)
T 3utm_A 289 LAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTP 333 (351)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC--
T ss_pred HcCcHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhccc
Confidence 99999999999999999999999999999998 6677788777754
No 29
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=2.3e-31 Score=269.68 Aligned_cols=202 Identities=21% Similarity=0.086 Sum_probs=184.1
Q ss_pred HHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcch
Q 008204 148 VIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDE 223 (574)
Q Consensus 148 ~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~ 223 (574)
..++|+.|+..|..+++++|+++|++++.. +.+|.||||+|+..|+.+ |+++|++++..+..|.||||.|+..+
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g 117 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLERGADINYA--NVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCG 117 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHCCCTTCB--CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 568999999999999999999999999987 556999999999999965 77888999999999999999999888
Q ss_pred hhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC--C------------------------
Q 008204 224 VSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY--K------------------------ 277 (574)
Q Consensus 224 ~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g--~------------------------ 277 (574)
..+++++|++. |++++..|. .|.||||+|+..|+.++++.|+... +
T Consensus 118 -~~~~v~~Ll~~----g~~~~~~~~---~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (299)
T 1s70_B 118 -YLDIAEYLISQ----GAHVGAVNS---EGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGH 189 (299)
T ss_dssp -CHHHHHHHHHT----TCCTTCCCT---TSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred -CHHHHHHHHhC----CCCCCCcCC---CCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccC
Confidence 78899999855 999999888 9999999999999999998877642 1
Q ss_pred -----CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcH
Q 008204 278 -----VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTA 352 (574)
Q Consensus 278 -----~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~Tp 352 (574)
.+..|.||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||
T Consensus 190 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~ 268 (299)
T 1s70_B 190 INDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTA 268 (299)
T ss_dssp CCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCT
T ss_pred cchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 2467999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcC
Q 008204 353 VAICRRMT 360 (574)
Q Consensus 353 L~~A~~~g 360 (574)
||+|+...
T Consensus 269 l~~A~~~~ 276 (299)
T 1s70_B 269 FDVADEDI 276 (299)
T ss_dssp TTSCCSGG
T ss_pred HHHHHHHH
Confidence 99997543
No 30
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=2.6e-30 Score=252.23 Aligned_cols=193 Identities=16% Similarity=0.103 Sum_probs=165.3
Q ss_pred HHHHHHHHHcCchhhHhhhccc-CcccchhccccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHH
Q 008204 149 IESIYASAAFKMTEVVSVYEGW-LLKVVREALVEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSE 227 (574)
Q Consensus 149 ~elL~~A~~~~~~elv~~Ll~~-gadvn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~ 227 (574)
.++||.|+..|..+++++|++. |++++.+ +.+|.||||+|+..|+.++++..++.....
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~------------------ 63 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFEGCEVHQR--GAMGETALHIAALYDNLEAAMVLMEAAPEL------------------ 63 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTTCSCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHHCGGG------------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCCcccC--CCCCCCHHHHHHHcCCHHHHHHHHHcCchh------------------
Confidence 4689999999999999998887 9998887 556999999999999887666665532110
Q ss_pred HHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-CCCC----------------CCccHHHHHH
Q 008204 228 IKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-KVTL----------------DDACALHYAA 290 (574)
Q Consensus 228 i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~d~----------------~g~tpLh~Aa 290 (574)
. ..+.+..|. .|.||||+|+..|+.+++++|++.| +++. .|+||||+|+
T Consensus 64 -----~------~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 129 (232)
T 2rfa_A 64 -----V------FEPMTSELY---EGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAA 129 (232)
T ss_dssp -----G------GCCCCSTTT---TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHH
T ss_pred -----c------cccccccCC---CCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHH
Confidence 0 011244454 9999999999999999999999999 4432 6999999999
Q ss_pred HcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHH----HHHHhCCCCC------CCCCCCCCcHHHHHHHcC
Q 008204 291 AYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVM----VVLLSKGACS------SETTPDGQTAVAICRRMT 360 (574)
Q Consensus 291 ~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v----~~LL~~GAdv------n~~d~~G~TpL~~A~~~g 360 (574)
..|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++ ++|+++|+++ +.+|..|+||||+|+..|
T Consensus 130 ~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g 208 (232)
T 2rfa_A 130 CVGSEEIVRLLIEHG-ADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEG 208 (232)
T ss_dssp HHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHT
T ss_pred HcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcC
Confidence 999999999999998 99999999999999999999999988 9999999998 689999999999999999
Q ss_pred ChhhHHHHHhcCCCcc
Q 008204 361 RRKDYIEATKQGQETN 376 (574)
Q Consensus 361 ~~~~v~~l~~~G~~~~ 376 (574)
+.+++++|+++|..+.
T Consensus 209 ~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 209 NIVMFQHLMQKRKHIA 224 (232)
T ss_dssp CHHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHhcCccch
Confidence 9999999999986543
No 31
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=1.3e-30 Score=263.97 Aligned_cols=225 Identities=11% Similarity=0.025 Sum_probs=193.1
Q ss_pred cCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcchhhHHHHHHHh
Q 008204 158 FKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRV 233 (574)
Q Consensus 158 ~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~ 233 (574)
++..++.++|.+.+ ++.+ +.+|.||||+|+..|+.+ |+++|++++..+ |.||||.|+..+ ..+++++|+
T Consensus 10 ~~~~~v~~lL~~~~--~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g-~~~~v~~Ll 82 (285)
T 3kea_A 10 WKSKQLKSFLSSKD--TFKA--DVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLE-DTKIVKILL 82 (285)
T ss_dssp CCHHHHHHHHHSTT--TTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSS-SCHHHHHHH
T ss_pred cCHHHHHHHHHhCC--CCcc--CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcC-CHHHHHHHH
Confidence 45567778887764 4554 456999999999999965 778888888774 899999999988 788999998
Q ss_pred hcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCC-ccHHHHHHHcCCHHHHHHHHHcCCCC
Q 008204 234 KSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDD-ACALHYAAAYCNPKVFKEVHNMGLAD 308 (574)
Q Consensus 234 ~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g-~tpLh~Aa~~g~~~~v~~LL~~g~ad 308 (574)
+. |++++..|. .|+||||+|+..|+.+++++|+++| + .+..| .||||+|+..|+.+++++|+++| ++
T Consensus 83 ~~----ga~~~~~d~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g-~~ 154 (285)
T 3kea_A 83 FS----GLDDSQFDD---KGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEI-PS 154 (285)
T ss_dssp HT----TCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTS-CT
T ss_pred HC----CCCCCCcCC---CCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCC-Cc
Confidence 55 999999888 9999999999999999999999999 3 46778 79999999999999999999998 66
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcH-HHHHHHcCChhhHHHHHhcCCCccchhhHHHHHHc
Q 008204 309 INLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTA-VAICRRMTRRKDYIEATKQGQETNKDWLCIDVLER 387 (574)
Q Consensus 309 vn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~Tp-L~~A~~~g~~~~v~~l~~~G~~~~~~~~~~~ile~ 387 (574)
+... ..|+||||+|+..|+.+++++|+++|++++.+|..|+|| ||+|+..|+.+++++|++.|++++....
T Consensus 155 ~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~------- 226 (285)
T 3kea_A 155 TFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL------- 226 (285)
T ss_dssp TCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------
T ss_pred cccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------
Confidence 6322 289999999999999999999999999999999999998 9999999999999999999998875331
Q ss_pred hhccCCCCCCcccchhhhcccchhhHHHHHhc
Q 008204 388 DMTTNSTSGNLAMSSEVIDDVFQMNLDYLENR 419 (574)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~l~~~ll~le~~ 419 (574)
.++..++..+..++++++
T Consensus 227 --------------~a~~~~~~~iv~~Ll~~g 244 (285)
T 3kea_A 227 --------------ENVLLDDAEIAKMIIEKH 244 (285)
T ss_dssp --------------GGGTTTCHHHHHHHHHHH
T ss_pred --------------hhhhcCCHHHHHHHHHcC
Confidence 123345777888888888
No 32
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=7.8e-30 Score=238.46 Aligned_cols=133 Identities=31% Similarity=0.386 Sum_probs=124.5
Q ss_pred CCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCC
Q 008204 240 EANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDAR 315 (574)
Q Consensus 240 ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~ 315 (574)
|+|+|..|. .|+||||+|+..++.+++++|++.| + .|.+|+||||+|+..|+.++|++||+.| +|+|.+|.+
T Consensus 27 Gadvn~~d~---~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-advn~~d~~ 102 (169)
T 4gpm_A 27 GADVNASDS---DGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNAKDSD 102 (169)
T ss_dssp TCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTT
T ss_pred CCCCCCcCC---CCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCc-CCCCCCCCC
Confidence 899999888 9999999999999999999999999 4 4688999999999999999999999998 999999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 008204 316 GRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETN 376 (574)
Q Consensus 316 G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 376 (574)
|+||||+|+..|+.++|++|+++|++++.+|.+|+||||+|+..|+.+++++|+++|++..
T Consensus 103 G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 103 GRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999998764
No 33
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=5.8e-30 Score=250.58 Aligned_cols=188 Identities=20% Similarity=0.134 Sum_probs=172.7
Q ss_pred ccCCchHHHHHHHcCCHhH----Hh----hhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCC
Q 008204 180 VEDVIPILVAALQCQLYPL----CS----FCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHE 251 (574)
Q Consensus 180 ~~~g~t~L~~A~~~g~~~L----l~----~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~ 251 (574)
+++|.||||+|+..|+.++ ++ .+.+++..+..|.||||.|+..+ ..+++++|++. |++++..+.
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~----g~~~~~~~~--- 77 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITT-LPSVVRLLVTA----GASPMALDR--- 77 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT-CHHHHHHHHHT----TCCTTCCCT---
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcC-CHHHHHHHHHc----CCCccccCC---
Confidence 5669999999999999663 33 56788888999999999999888 78899999855 999999887
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCCC--------CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCChHHHH
Q 008204 252 KRVRRIHKALDSDDFELLNLLLNEYK--------VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKD-ARGRTVLHV 322 (574)
Q Consensus 252 ~g~tpLh~A~~~g~~~~v~~Ll~~g~--------~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d-~~G~TpLh~ 322 (574)
.|.||||+|+..|+.+++++|++.+. .|..|+||||+|+..|+.+++++|++.| ++++..+ ..|+||||+
T Consensus 78 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~g~t~L~~ 156 (241)
T 1k1a_A 78 HGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG-ADIDAVDIKSGRSPLIH 156 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTTCCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcC-CCcccccccCCCcHHHH
Confidence 99999999999999999999999872 3578999999999999999999999998 9999999 889999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 008204 323 AARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETN 376 (574)
Q Consensus 323 Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 376 (574)
|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+++.
T Consensus 157 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 210 (241)
T 1k1a_A 157 AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS 210 (241)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Confidence 999999999999999999999999999999999999999999999999998765
No 34
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=2e-30 Score=254.22 Aligned_cols=188 Identities=14% Similarity=0.111 Sum_probs=156.7
Q ss_pred HHHHHHHHHcCchhhHhhhcccCc----ccchhccccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchh
Q 008204 149 IESIYASAAFKMTEVVSVYEGWLL----KVVREALVEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEV 224 (574)
Q Consensus 149 ~elL~~A~~~~~~elv~~Ll~~ga----dvn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~ 224 (574)
.++||+|+..|..+++++|++.+. +++.. +..|.||||+|+..|+.++++.+++
T Consensus 9 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~-------------------- 66 (236)
T 1ikn_D 9 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQ--NNLQQTPLHLAVITNQPEIAEALLG-------------------- 66 (236)
T ss_dssp CCTTHHHHHTTCSSSSSCCCC-----CCCCCCC--CTTCCCHHHHHHHTTCHHHHHCCCS--------------------
T ss_pred CchhHHHHHcCChhHHHHHHHHhhccHHHhhcc--CCCCCCHHHHHHHcCCHHHHHHHHH--------------------
Confidence 345666666666666666666554 34444 3346666666666666555544433
Q ss_pred hHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCC----------CCCCCccHHHHHHHcCC
Q 008204 225 SSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEYK----------VTLDDACALHYAAAYCN 294 (574)
Q Consensus 225 ~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g~----------~d~~g~tpLh~Aa~~g~ 294 (574)
.|++++..|. .|+||||+|+..|+.+++++|++.|. .+..|+||||+|+..|+
T Consensus 67 --------------~g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~ 129 (236)
T 1ikn_D 67 --------------AGCDPELRDF---RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY 129 (236)
T ss_dssp --------------CCCCSCCCCT---TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTC
T ss_pred --------------cCCCCCCcCC---CCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCC
Confidence 3888998887 99999999999999999999999972 35679999999999999
Q ss_pred HHHHHHHHHcCCCCccccCC-CCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCC
Q 008204 295 PKVFKEVHNMGLADINLKDA-RGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQ 373 (574)
Q Consensus 295 ~~~v~~LL~~g~advn~~d~-~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~ 373 (574)
.+++++|++.| ++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+
T Consensus 130 ~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga 208 (236)
T 1ikn_D 130 LGIVELLVSLG-ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 208 (236)
T ss_dssp HHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred HHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcch
Confidence 99999999999 99999998 99999999999999999999999999999999999999999999999999999999998
Q ss_pred Ccc
Q 008204 374 ETN 376 (574)
Q Consensus 374 ~~~ 376 (574)
++.
T Consensus 209 ~~~ 211 (236)
T 1ikn_D 209 ENL 211 (236)
T ss_dssp GGG
T ss_pred hhh
Confidence 765
No 35
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=1.2e-29 Score=241.81 Aligned_cols=185 Identities=18% Similarity=0.080 Sum_probs=161.1
Q ss_pred HHHHHHHHHcCchhhHhhhcccCc-ccchhccccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHH
Q 008204 149 IESIYASAAFKMTEVVSVYEGWLL-KVVREALVEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSE 227 (574)
Q Consensus 149 ~elL~~A~~~~~~elv~~Ll~~ga-dvn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~ 227 (574)
.++|+.|+..+..+.++.++..+. +++.. +.+|.||||+|+..|+.++++..++
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~----------------------- 60 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQDTTYQVDEV--DTEGNTPLNIAVHNNDIEIAKALID----------------------- 60 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTCTTCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHH-----------------------
T ss_pred ccHHHHHHHhccHHHHHHHHHcCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHH-----------------------
Confidence 457888888888887777766655 77765 4458888888887777665554443
Q ss_pred HHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC--C---CCCCCccHHHHHHHcCCHHHHHHHH
Q 008204 228 IKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY--K---VTLDDACALHYAAAYCNPKVFKEVH 302 (574)
Q Consensus 228 i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g--~---~d~~g~tpLh~Aa~~g~~~~v~~LL 302 (574)
. |++++..+. .|.||||+|+..|+.+++++|++.+ + .|..|.||||+|+..|+.+++++|+
T Consensus 61 -------~----g~~~~~~~~---~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 126 (201)
T 3hra_A 61 -------R----GADINLQNS---ISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLL 126 (201)
T ss_dssp -------T----TCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHH
T ss_pred -------c----CCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHH
Confidence 2 888988887 9999999999999999999999554 2 4678999999999999999999999
Q ss_pred HcCCCCccccCCCCChHHHHHHHcCC-----HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcC
Q 008204 303 NMGLADINLKDARGRTVLHVAARRKE-----PEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQG 372 (574)
Q Consensus 303 ~~g~advn~~d~~G~TpLh~Aa~~g~-----~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G 372 (574)
+.|+++++.+|..|+||||+|+..++ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 127 ~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 127 EDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99889999999999999999999998 99999999999999999999999999999999999999999987
No 36
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=6.4e-31 Score=266.31 Aligned_cols=210 Identities=11% Similarity=-0.042 Sum_probs=192.0
Q ss_pred hHHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcc
Q 008204 147 YVIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPD 222 (574)
Q Consensus 147 ~~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~ 222 (574)
...++||+|+..|..+++++|+++|++++.+ +|.||||+|+..|+.+ |+++|++++.++..|.||||.|+..
T Consensus 30 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~ 105 (285)
T 3kea_A 30 HGHSASYYAIADNNVRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDS 105 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC----TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHc
Confidence 3567899999999999999999999999875 4999999999999854 7888999999999999999999988
Q ss_pred hhhHHHHHHHhhcccccCCCcccCCCCCCCC-chHHHHHHHcCCHHHHHHHHhCC-C-CCC-CCccHHHHHHHcCCHHHH
Q 008204 223 EVSSEIKSLRVKSNQESEANIKEVDPMHEKR-VRRIHKALDSDDFELLNLLLNEY-K-VTL-DDACALHYAAAYCNPKVF 298 (574)
Q Consensus 223 ~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g-~tpLh~A~~~g~~~~v~~Ll~~g-~-~d~-~g~tpLh~Aa~~g~~~~v 298 (574)
+ ..+++++|++. |++++..+. .| .||||+|+..|+.+++++|+++| + .+. .|+||||+|+..|+.+++
T Consensus 106 g-~~~~v~~Ll~~----ga~~~~~~~---~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v 177 (285)
T 3kea_A 106 G-NMQTVKLFVKK----NWRLMFYGK---TGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMM 177 (285)
T ss_dssp T-CHHHHHHHHHH----CGGGGGCSS---SGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHH
T ss_pred C-CHHHHHHHHhc----CCCCCccCC---CCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHH
Confidence 8 78999999865 999999888 88 79999999999999999999999 3 344 899999999999999999
Q ss_pred HHHHHcCCCCccccCCCCChH-HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 008204 299 KEVHNMGLADINLKDARGRTV-LHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETN 376 (574)
Q Consensus 299 ~~LL~~g~advn~~d~~G~Tp-Lh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 376 (574)
++|+++| +++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|. .|+..|+.+++++|+++|.+..
T Consensus 178 ~~Ll~~g-ad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~~ 248 (285)
T 3kea_A 178 ILLLDYM-TSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKHVEYK 248 (285)
T ss_dssp HHHHHHH-HHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHcC-CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCCCC
Confidence 9999998 9999999999998 9999999999999999999999999983 5677899999999999986543
No 37
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=3.1e-30 Score=255.94 Aligned_cols=195 Identities=16% Similarity=0.120 Sum_probs=163.5
Q ss_pred HHHHHHHHHHcCchh----hHhhhcccCcccch----hccccCCchHHHHHHHc---CCHh----HHhhhhccccccccc
Q 008204 148 VIESIYASAAFKMTE----VVSVYEGWLLKVVR----EALVEDVIPILVAALQC---QLYP----LCSFCIQRIARSNID 212 (574)
Q Consensus 148 ~~elL~~A~~~~~~e----lv~~Ll~~gadvn~----~~~~~~g~t~L~~A~~~---g~~~----Ll~~ga~~~~~~~~~ 212 (574)
+.++||.|+..|..+ ++++|++.|++++. + +.+|.||||+|+.. |+.+ |++.|++++..+
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~--d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~--- 76 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTE--GSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPK--- 76 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSB--TTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSS---
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccC--CCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchh---
Confidence 467899999999997 55677778999987 5 55699999999999 8855 445555443221
Q ss_pred cccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-CCC---CC-------
Q 008204 213 NVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-KVT---LD------- 281 (574)
Q Consensus 213 ~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~d---~~------- 281 (574)
.++ .+.....| ..|.||||+|+..|+.+++++|++.| +++ ..
T Consensus 77 ------------------~~~------~~~~~~~d---~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~ 129 (256)
T 2etb_A 77 ------------------PLV------NAQCTDEF---YQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQ 129 (256)
T ss_dssp ------------------CGG------GCCCCSTT---TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCS
T ss_pred ------------------hhc------cccccccc---ccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccc
Confidence 011 11222333 38999999999999999999999999 443 33
Q ss_pred ------CccHHHHHHHcCCHHHHHHHHH---cCCCCccccCCCCChHHHHHHH--cCCHH-------HHHHHHhCCCCC-
Q 008204 282 ------DACALHYAAAYCNPKVFKEVHN---MGLADINLKDARGRTVLHVAAR--RKEPE-------VMVVLLSKGACS- 342 (574)
Q Consensus 282 ------g~tpLh~Aa~~g~~~~v~~LL~---~g~advn~~d~~G~TpLh~Aa~--~g~~~-------~v~~LL~~GAdv- 342 (574)
|+||||+|+..|+.+++++||+ .| +++|.+|..|+||||+|+. .++.+ ++++|+++|+++
T Consensus 130 ~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~g-a~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~ 208 (256)
T 2etb_A 130 GTCFYFGELPLSLAACTKQWDVVTYLLENPHQP-ASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLC 208 (256)
T ss_dssp SSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC-CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhccccC-CCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcc
Confidence 9999999999999999999999 77 9999999999999999999 88888 999999999999
Q ss_pred ------CCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCc
Q 008204 343 ------SETTPDGQTAVAICRRMTRRKDYIEATKQGQET 375 (574)
Q Consensus 343 ------n~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~ 375 (574)
+.+|..|+||||+|+..|+.+++++|+++|..+
T Consensus 209 ~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 209 PTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp TTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 999999999999999999999999999998644
No 38
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=4e-29 Score=243.42 Aligned_cols=215 Identities=15% Similarity=0.088 Sum_probs=185.3
Q ss_pred CCchHHHHHHHcCCHhHHhhhh-----ccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchH
Q 008204 182 DVIPILVAALQCQLYPLCSFCI-----QRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRR 256 (574)
Q Consensus 182 ~g~t~L~~A~~~g~~~Ll~~ga-----~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tp 256 (574)
.+.+|||.|+..|..+.++..+ .++..+..|.|+||.|+..+ ..+++++|++. |++++..|. .|+||
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~----g~~~~~~~~---~g~t~ 76 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAG-HTEIVEFLLQL----GVPVNDKDD---AGWSP 76 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHT-CHHHHHHHHHT----TCCSCCCCT---TSCCH
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcC-cHHHHHHHHHh----CCCCCCcCC---CCCCH
Confidence 3679999999999977554443 34566888999999999888 78899999855 999999888 99999
Q ss_pred HHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHH
Q 008204 257 IHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVM 332 (574)
Q Consensus 257 Lh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v 332 (574)
||+|+..|+.+++++|++.| + .|..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++
T Consensus 77 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v 155 (231)
T 3aji_A 77 LHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAKDHYDATAMHRAAAKGNLKMV 155 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 99999999999999999999 3 4678999999999999999999999998 99999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCccchhhHHHHHHchhccCCCCCCcccchhhhcccchhh
Q 008204 333 VVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETNKDWLCIDVLERDMTTNSTSGNLAMSSEVIDDVFQMN 412 (574)
Q Consensus 333 ~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~~~~~~~ile~~~~~~~~~~~~~~~~~~~~~~l~~~ 412 (574)
++|+++|++++.+|..|+||||+|+..|+.+++++|++.|++++... ..+.+++..+.......+.
T Consensus 156 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~--------------~~g~t~l~~A~~~~~~~i~ 221 (231)
T 3aji_A 156 HILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIEN--------------KEEKTPLQVAKGGLGLILK 221 (231)
T ss_dssp HHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCC--------------TTSCCHHHHSCHHHHHHHH
T ss_pred HHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC--------------CCCCCHHHHHHhhHHHHHH
Confidence 99999999999999999999999999999999999999998775311 2345555555555566666
Q ss_pred HHHHHhc
Q 008204 413 LDYLENR 419 (574)
Q Consensus 413 ll~le~~ 419 (574)
.++++.+
T Consensus 222 ~lL~~~~ 228 (231)
T 3aji_A 222 RLAEGEE 228 (231)
T ss_dssp HHHHHHH
T ss_pred HHHcccc
Confidence 6666554
No 39
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=1e-28 Score=239.85 Aligned_cols=186 Identities=18% Similarity=0.119 Sum_probs=165.6
Q ss_pred CchHHHHHHHcCCHh----HHhhhhcccc-ccccccccccccCcchhhHHHHHHHhhcccccC--CCccc-CCCCCCCCc
Q 008204 183 VIPILVAALQCQLYP----LCSFCIQRIA-RSNIDNVCLEKELPDEVSSEIKSLRVKSNQESE--ANIKE-VDPMHEKRV 254 (574)
Q Consensus 183 g~t~L~~A~~~g~~~----Ll~~ga~~~~-~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~g--a~~n~-~d~~~~~g~ 254 (574)
|.||||+|+..|+.+ |++.+.+.+. .+..|.||||.|+..+ ..+++++|++. | ++++. .+. .|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~----~~~~~~~~~~~~---~g~ 73 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQ-AHEITSFLLSK----MENVNLDDYPDD---SGW 73 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTT-CHHHHHHHHHT----CTTCCGGGCCCT---TSC
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcC-CHHHHHHHHhc----cccccccccCCC---CCC
Confidence 679999999999966 4555555544 7888999999999888 78899999855 7 44444 555 999
Q ss_pred hHHHHHHHcCCHHHHHHHHhCC---C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCC
Q 008204 255 RRIHKALDSDDFELLNLLLNEY---K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKE 328 (574)
Q Consensus 255 tpLh~A~~~g~~~~v~~Ll~~g---~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~ 328 (574)
||||+|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+
T Consensus 74 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~ 152 (228)
T 2dzn_A 74 TPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG-ASVRIKDKFNQIPLHRAASVGS 152 (228)
T ss_dssp CHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTC
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcC-CCccccCCCCCCHHHHHHHcCC
Confidence 9999999999999999999997 2 3578999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHcCChhhHHHHH-hcCCCccc
Q 008204 329 PEVMVVLLSKG-ACSSETTPDGQTAVAICRRMTRRKDYIEAT-KQGQETNK 377 (574)
Q Consensus 329 ~~~v~~LL~~G-Advn~~d~~G~TpL~~A~~~g~~~~v~~l~-~~G~~~~~ 377 (574)
.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+ +.|+++..
T Consensus 153 ~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~ 203 (228)
T 2dzn_A 153 LKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL 203 (228)
T ss_dssp HHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCC
T ss_pred HHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCc
Confidence 99999999999 999999999999999999999999999999 88987763
No 40
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=1.1e-29 Score=265.37 Aligned_cols=224 Identities=12% Similarity=0.099 Sum_probs=193.4
Q ss_pred cccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCC
Q 008204 172 LKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVD 247 (574)
Q Consensus 172 advn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d 247 (574)
.+.+.. +.+|.||||+|+..|+.+ |+++|++++..+..|.||||.|+..+ ..+++++|++. |++++.
T Consensus 11 ~~~~~~--d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g-~~~~v~~Ll~~----g~~~~~-- 81 (364)
T 3ljn_A 11 LNRIKS--DDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFG-CVDTAKYLASV----GEVHSL-- 81 (364)
T ss_dssp -----C--CHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHC-CHHHHHHHHHH----CCCCCC--
T ss_pred CCcccc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcC-CHHHHHHHHHC----CCCccc--
Confidence 344444 455999999999999955 77888899999999999999999988 88999999865 775443
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHhC----C-C--------------------CCCCCccHHHHHHHcC--CHHHHHH
Q 008204 248 PMHEKRVRRIHKALDSDDFELLNLLLNE----Y-K--------------------VTLDDACALHYAAAYC--NPKVFKE 300 (574)
Q Consensus 248 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~----g-~--------------------~d~~g~tpLh~Aa~~g--~~~~v~~ 300 (574)
. .|+||||+|+..|+.+++++|++. | + .|..|.||||+|+..| +.++|++
T Consensus 82 ~---~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~ 158 (364)
T 3ljn_A 82 W---HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKI 158 (364)
T ss_dssp B---TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHH
T ss_pred c---CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHH
Confidence 3 789999999999999999999998 4 1 3457999999999999 9999999
Q ss_pred HHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCC-----CCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCc
Q 008204 301 VHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGAC-----SSETTPDGQTAVAICRRMTRRKDYIEATKQGQET 375 (574)
Q Consensus 301 LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAd-----vn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~ 375 (574)
||+.| +++|.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++.|+++
T Consensus 159 Ll~~g-a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~ 237 (364)
T 3ljn_A 159 LVQLG-ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDV 237 (364)
T ss_dssp HHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCT
T ss_pred HHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99998 99999999999999999999999999999999999 9999999999999999999999999999999877
Q ss_pred cchhhHHHHHHchhccCCCCCCcccchhhhcccchhhHHHHHhcCchh
Q 008204 376 NKDWLCIDVLERDMTTNSTSGNLAMSSEVIDDVFQMNLDYLENRGADI 423 (574)
Q Consensus 376 ~~~~~~~~ile~~~~~~~~~~~~~~~~~~~~~~l~~~ll~le~~vadi 423 (574)
+.. ...+.+++.+++..+...+..++++.+ +++
T Consensus 238 ~~~--------------d~~g~tpL~~A~~~g~~~~v~~Ll~~~-~~~ 270 (364)
T 3ljn_A 238 NME--------------DNEHTVPLYLSVRAAMVLLTKELLQKT-DVF 270 (364)
T ss_dssp TCC--------------CTTSCCHHHHHHHTCCHHHHHHHHHHS-CHH
T ss_pred CCC--------------CCCCCCHHHHHHHhChHHHHHHHHHcC-Cch
Confidence 532 134667778888888888888899886 443
No 41
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=7.2e-29 Score=231.91 Aligned_cols=156 Identities=22% Similarity=0.204 Sum_probs=137.0
Q ss_pred HHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHH
Q 008204 149 IESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEI 228 (574)
Q Consensus 149 ~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i 228 (574)
-+.|+.|+..|..+++++|+++|+++|.+ +.+|.||||+|+..+..++++..++
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~--d~~g~t~l~~a~~~~~~~~~~~ll~------------------------ 58 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADVNAS--DSDGRTPLHHAAENGHKEVVKLLIS------------------------ 58 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHH------------------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHh------------------------
Confidence 45688899999999999999999999987 5669999999999988776554433
Q ss_pred HHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHc
Q 008204 229 KSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNM 304 (574)
Q Consensus 229 ~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~ 304 (574)
.|++++..|. +|+||||+|+..|+.++|++|++.| + .|.+|+||||+|+..|+.++|++||+.
T Consensus 59 ----------~gad~~~~d~---~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ 125 (169)
T 4gpm_A 59 ----------KGADVNAKDS---DGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK 125 (169)
T ss_dssp ----------TTCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ----------cccchhhhcc---CCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 2888998888 9999999999999999999999999 4 468899999999999999999999999
Q ss_pred CCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 008204 305 GLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSE 344 (574)
Q Consensus 305 g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~ 344 (574)
| +|++.+|..|+||||+|+.+|+.+++++|+++||+++.
T Consensus 126 g-ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 126 G-ADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred C-CCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 8 99999999999999999999999999999999999874
No 42
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=5.2e-29 Score=252.33 Aligned_cols=188 Identities=18% Similarity=0.133 Sum_probs=171.1
Q ss_pred cCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchH
Q 008204 181 EDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRR 256 (574)
Q Consensus 181 ~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tp 256 (574)
.+|.||||+|+..|+.+ |++.|++++..+..|.||||.|+..+ ..+++++|++. |++++..|. .|+||
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~----ga~~~~~~~---~g~tp 109 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDD-NVDMVKFLVEN----GANINQPDN---EGWIP 109 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTT-CHHHHHHHHHT----TCCTTCCCT---TSCCH
T ss_pred cCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC-CHHHHHHHHHC----CCCCCCCCC---CCCcH
Confidence 35789999999999955 77888899999999999999999888 78899999854 999999888 99999
Q ss_pred HHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccc---------------------
Q 008204 257 IHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINL--------------------- 311 (574)
Q Consensus 257 Lh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~--------------------- 311 (574)
||+|+..|+.+++++|+++| + .|..|.||||+|+..++.++++.|+...+++++.
T Consensus 110 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (299)
T 1s70_B 110 LHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGH 189 (299)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccC
Confidence 99999999999999999999 3 4688999999999999999999888765566553
Q ss_pred -----cCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 008204 312 -----KDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETN 376 (574)
Q Consensus 312 -----~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 376 (574)
.+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+++.
T Consensus 190 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~ 259 (299)
T 1s70_B 190 INDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDME 259 (299)
T ss_dssp CCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCC
Confidence 56789999999999999999999999999999999999999999999999999999999998765
No 43
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=4.4e-29 Score=248.02 Aligned_cols=203 Identities=14% Similarity=0.155 Sum_probs=166.7
Q ss_pred hHHHHHHHHHHcCchhhHhhhc----ccCcccchhccc--cCCchHHHHHH---HcCCHhHHhhhhcccccccccccccc
Q 008204 147 YVIESIYASAAFKMTEVVSVYE----GWLLKVVREALV--EDVIPILVAAL---QCQLYPLCSFCIQRIARSNIDNVCLE 217 (574)
Q Consensus 147 ~~~elL~~A~~~~~~elv~~Ll----~~gadvn~~~~~--~~g~t~L~~A~---~~g~~~Ll~~ga~~~~~~~~~~t~l~ 217 (574)
+..++|+.|+..|..+.++.|+ +.+.+++..+.. .+|.||||+|+ ..|+.++++..++..+...
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~------- 76 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTG------- 76 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTT-------
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhccccc-------
Confidence 4578999999999999655554 489999876432 66999999999 5688665555554322100
Q ss_pred ccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-CC---C--------------
Q 008204 218 KELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-KV---T-------------- 279 (574)
Q Consensus 218 ~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---d-------------- 279 (574)
.+ ..++ .++++..|. .|+||||+|+..|+.++|++|++.| ++ +
T Consensus 77 ---------~~-~~~~------~~~~~~~d~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 137 (260)
T 3jxi_A 77 ---------NM-REFI------NSPFRDVYY---RGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYF 137 (260)
T ss_dssp ---------CH-HHHH------TCCBCCSSE---ESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSC
T ss_pred ---------ch-Hhhh------ccccccccc---CCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccc
Confidence 00 1112 344555555 9999999999999999999999999 44 3
Q ss_pred CCCccHHHHHHHcCCHHHHHHHHH---cCCCCccccCCCCChHHHHHHHcCC---------HHHHHHHHhCCCCC-----
Q 008204 280 LDDACALHYAAAYCNPKVFKEVHN---MGLADINLKDARGRTVLHVAARRKE---------PEVMVVLLSKGACS----- 342 (574)
Q Consensus 280 ~~g~tpLh~Aa~~g~~~~v~~LL~---~g~advn~~d~~G~TpLh~Aa~~g~---------~~~v~~LL~~GAdv----- 342 (574)
..|+||||+|+..|+.++|++||+ .| +++|.+|..|+||||+|+..|+ .+++++|+++|+++
T Consensus 138 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g-a~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~ 216 (260)
T 3jxi_A 138 YFGELPLSLAACTNQPHIVHYLTENGHKQ-ADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTN 216 (260)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHHHHCSSCC-CCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccccC-CCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccc
Confidence 469999999999999999999999 77 9999999999999999999888 79999999999999
Q ss_pred --CCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 008204 343 --SETTPDGQTAVAICRRMTRRKDYIEATKQGQETN 376 (574)
Q Consensus 343 --n~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 376 (574)
+.+|..|+||||+|+..|+.+++++|+++|..+.
T Consensus 217 ~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 217 LEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 7899999999999999999999999999986543
No 44
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=7.5e-29 Score=248.54 Aligned_cols=203 Identities=18% Similarity=0.137 Sum_probs=163.4
Q ss_pred hHHHHHHHHHHcCchhhHhhhcc----cCcccchhc--cccCCchHHHHHHHc---CCHhHHhhhhcccccccccccccc
Q 008204 147 YVIESIYASAAFKMTEVVSVYEG----WLLKVVREA--LVEDVIPILVAALQC---QLYPLCSFCIQRIARSNIDNVCLE 217 (574)
Q Consensus 147 ~~~elL~~A~~~~~~elv~~Ll~----~gadvn~~~--~~~~g~t~L~~A~~~---g~~~Ll~~ga~~~~~~~~~~t~l~ 217 (574)
...++|+.|+..|..++++.|++ .+.+++... .+.+|.||||+|+.. |+.++++.+++..+...
T Consensus 12 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~------- 84 (273)
T 2pnn_A 12 YDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTD------- 84 (273)
T ss_dssp CCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTT-------
T ss_pred ccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcccc-------
Confidence 46789999999999999988886 455554321 145699999999987 77665555544322100
Q ss_pred ccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-CCC---C-------------
Q 008204 218 KELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-KVT---L------------- 280 (574)
Q Consensus 218 ~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~d---~------------- 280 (574)
.++.++ .+.+...|. .|+||||+|+..|+.++|++|++.| +++ .
T Consensus 85 ----------~~~~~i------~~~~~~~d~---~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 145 (273)
T 2pnn_A 85 ----------SLKQFV------NASYTDSYY---KGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGF 145 (273)
T ss_dssp ----------CHHHHH------TCCCCSTTT---TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCC
T ss_pred ----------chhHHh------hcccccccC---CCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccc
Confidence 011222 223333444 9999999999999999999999999 443 3
Q ss_pred -CCccHHHHHHHcCCHHHHHHHHH---cCCCCccccCCCCChHHHHHHHcCC---------HHHHHHHHhCCCCCC----
Q 008204 281 -DDACALHYAAAYCNPKVFKEVHN---MGLADINLKDARGRTVLHVAARRKE---------PEVMVVLLSKGACSS---- 343 (574)
Q Consensus 281 -~g~tpLh~Aa~~g~~~~v~~LL~---~g~advn~~d~~G~TpLh~Aa~~g~---------~~~v~~LL~~GAdvn---- 343 (574)
.|+||||+|+..|+.+++++||+ .| +++|.+|..|+||||+|+..|+ .+++++|+++|++++
T Consensus 146 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g-ad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~ 224 (273)
T 2pnn_A 146 YFGELPLSLAACTNQLAIVKFLLQNSWQP-ADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLK 224 (273)
T ss_dssp CSCBSHHHHHHHTTCHHHHHHHHHCSSCC-CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhcccCC-CCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccc
Confidence 69999999999999999999999 77 9999999999999999999998 899999999999997
Q ss_pred ---CCCCCCCcHHHHHHHcCChhhHHHHHhcCC-Ccc
Q 008204 344 ---ETTPDGQTAVAICRRMTRRKDYIEATKQGQ-ETN 376 (574)
Q Consensus 344 ---~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~-~~~ 376 (574)
.+|..|+||||+|+..|+.+++++|+++|+ +|.
T Consensus 225 ~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~ 261 (273)
T 2pnn_A 225 LEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPE 261 (273)
T ss_dssp GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC---
T ss_pred cccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCch
Confidence 489999999999999999999999999998 454
No 45
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=1.4e-27 Score=231.27 Aligned_cols=200 Identities=16% Similarity=0.105 Sum_probs=177.6
Q ss_pred hHHhhhhccccc-cccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhC
Q 008204 197 PLCSFCIQRIAR-SNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNE 275 (574)
Q Consensus 197 ~Ll~~ga~~~~~-~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ 275 (574)
.|++.|.+++.. +..|.|+||.|+..+ ..+++++|++. |++++..|. .|+||||+|+..|+.+++++|++.
T Consensus 9 ~Ll~~g~~~~~~~d~~g~t~L~~A~~~g-~~~~v~~Ll~~----g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 9 DFIYQGASLHNQTDRTGETALHLAARYS-RSDAAKRLLEA----SADANIQDN---MGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp TTEETTCCTTCCCTTTCCCHHHHHHHTT-CHHHHHHHHHT----TCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred HHHHcCCCcccccCCCCCchHHHHHHcC-CHHHHHHHHHc----CCCCCCcCC---CCCCHHHHHHHcCCHHHHHHHHHc
Confidence 367788888765 788999999999888 78889998855 999999887 999999999999999999999999
Q ss_pred CC-----CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Q 008204 276 YK-----VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQ 350 (574)
Q Consensus 276 g~-----~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~ 350 (574)
+. .+..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 81 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 159 (223)
T 2f8y_A 81 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREE 159 (223)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcC-CCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCc
Confidence 82 3578999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHcCChhhHHHHHhcCCCccchhhHHHHHHchhccCCCCCCcccchhhhcccchhhHHHHHhc
Q 008204 351 TAVAICRRMTRRKDYIEATKQGQETNKDWLCIDVLERDMTTNSTSGNLAMSSEVIDDVFQMNLDYLENR 419 (574)
Q Consensus 351 TpL~~A~~~g~~~~v~~l~~~G~~~~~~~~~~~ile~~~~~~~~~~~~~~~~~~~~~~l~~~ll~le~~ 419 (574)
||||+|+..|+.+++++|++.|+++.... ..+.+++..+...+...+..++++.+
T Consensus 160 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~--------------~~g~t~l~~A~~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 160 TPLFLAAREGSYETAKVLLDHFANRDITD--------------HMDRLPRDIAQERMHHDIVRLLDEYN 214 (223)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCC--------------TTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCcccc--------------ccCCCHHHHHHHhcchHHHHHHHHcC
Confidence 99999999999999999999998765311 23456666777777777877788777
No 46
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=4e-27 Score=229.58 Aligned_cols=192 Identities=16% Similarity=0.112 Sum_probs=165.3
Q ss_pred CchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHH
Q 008204 183 VIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALD 262 (574)
Q Consensus 183 g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~ 262 (574)
|.||||+|+..|+.++++..++. .|++++..|. .|+||||+|+.
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~---------------------------------~g~~~~~~~~---~g~t~L~~A~~ 46 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKF---------------------------------EGCEVHQRGA---MGETALHIAAL 46 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTT---------------------------------TCSCTTCCCT---TSCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHh---------------------------------cCCCcccCCC---CCCCHHHHHHH
Confidence 78999999999988877766552 1778888887 99999999999
Q ss_pred cCCHHHHHHHHhCC-CC--------CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCC-------------CCChHH
Q 008204 263 SDDFELLNLLLNEY-KV--------TLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDA-------------RGRTVL 320 (574)
Q Consensus 263 ~g~~~~v~~Ll~~g-~~--------d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~-------------~G~TpL 320 (574)
.|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+++| ++++..+. .|+|||
T Consensus 47 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~~~~~~g~t~L 125 (232)
T 2rfa_A 47 YDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARG-ASVSARATGSVFHYRPHNLIYYGEHPL 125 (232)
T ss_dssp TTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCCSGGGSCCTTCSCCCCSSHH
T ss_pred cCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCC-CCCCcccCCcceeecccccccCCCCHH
Confidence 99999999999998 32 458999999999999999999999998 99999876 799999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhH----HHHHhcCCCccchhhHHHHHHchhccCCCCC
Q 008204 321 HVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDY----IEATKQGQETNKDWLCIDVLERDMTTNSTSG 396 (574)
Q Consensus 321 h~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v----~~l~~~G~~~~~~~~~~~ile~~~~~~~~~~ 396 (574)
|+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+.+++ ++|++.|+.+..... .......+
T Consensus 126 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~--------~~~~~~~g 197 (232)
T 2rfa_A 126 SFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSL--------ELVPNNQG 197 (232)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCG--------GGCCCTTS
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhh--------hccCCCCC
Confidence 999999999999999999999999999999999999999999988 999999986642111 01222356
Q ss_pred CcccchhhhcccchhhHHHHHhc
Q 008204 397 NLAMSSEVIDDVFQMNLDYLENR 419 (574)
Q Consensus 397 ~~~~~~~~~~~~l~~~ll~le~~ 419 (574)
.+++.+++..++..+..++++++
T Consensus 198 ~tpl~~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 198 LTPFKLAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcC
Confidence 77788888888888888899888
No 47
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.95 E-value=3.2e-27 Score=230.12 Aligned_cols=218 Identities=15% Similarity=0.111 Sum_probs=191.8
Q ss_pred ccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCch
Q 008204 180 VEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVR 255 (574)
Q Consensus 180 ~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~t 255 (574)
++.+.++|+.|+..|..+ |++.|++++..+..|.|+||.|+..+ ..+++++|++. |++++..+. ..|.|
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~----~~~~~~~~~--~~~~t 78 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINN-RIDLVKYYISK----GAIVDQLGG--DLNST 78 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHHT----TCCTTCCBT--TTTBC
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhC-CHHHHHHHHHc----CCcchhhcC--CcCCC
Confidence 445889999999999955 77888889999999999999999888 78899999855 777775553 35999
Q ss_pred HHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCC-HH
Q 008204 256 RIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKE-PE 330 (574)
Q Consensus 256 pLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~-~~ 330 (574)
|||+|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+..++ .+
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~ 157 (240)
T 3eu9_A 79 PLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG-QDVDMMDQNGMTPLMWAAYRTHSVD 157 (240)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCCSST
T ss_pred hhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHhCChHH
Confidence 999999999999999999998 3 4678999999999999999999999998 9999999999999999997776 89
Q ss_pred HHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCChhhHHHHHhcCCCccchhhHHHHHHchhccCCCCCCcccchhhhcccc
Q 008204 331 VMVVLLSKGACSSETTP-DGQTAVAICRRMTRRKDYIEATKQGQETNKDWLCIDVLERDMTTNSTSGNLAMSSEVIDDVF 409 (574)
Q Consensus 331 ~v~~LL~~GAdvn~~d~-~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~~~~~~~ile~~~~~~~~~~~~~~~~~~~~~~l 409 (574)
++++|+++|++++..+. .|+||||+|+..|+.+++++|++.|+++.... ..+.+++.+++..++.
T Consensus 158 ~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--------------~~g~t~l~~A~~~~~~ 223 (240)
T 3eu9_A 158 PTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQN--------------IKGESALDLAKQRKNV 223 (240)
T ss_dssp THHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBC--------------TTSCBHHHHHHHTTCH
T ss_pred HHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC--------------CCCCCHHHHHHHcCcH
Confidence 99999999999999997 99999999999999999999999998765321 2356677788888888
Q ss_pred hhhHHHHHhc
Q 008204 410 QMNLDYLENR 419 (574)
Q Consensus 410 ~~~ll~le~~ 419 (574)
.+..++++.+
T Consensus 224 ~~v~~L~~~~ 233 (240)
T 3eu9_A 224 WMINHLQEAR 233 (240)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 8888888887
No 48
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=2.1e-27 Score=225.19 Aligned_cols=156 Identities=18% Similarity=0.145 Sum_probs=141.8
Q ss_pred ccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHH
Q 008204 180 VEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHK 259 (574)
Q Consensus 180 ~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~ 259 (574)
+.+|.||||+|+..|+.++++..++. |++++..|. .|+||||+
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------------------~~~~~~~~~---~g~t~L~~ 74 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVEN----------------------------------FDKLEDKDI---EGSTALIW 74 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHH----------------------------------HCCTTCCCT---TSCCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHh----------------------------------ccccccccc---cCccHHHH
Confidence 45588999999988877766655442 667777777 99999999
Q ss_pred HHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 008204 260 ALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVL 335 (574)
Q Consensus 260 A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~L 335 (574)
|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|
T Consensus 75 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 153 (192)
T 2rfm_A 75 AVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHG-ANVNDRNLEGETPLIVASKYGRSEIVKKL 153 (192)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCSSCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999 3 4678999999999999999999999998 99999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCC
Q 008204 336 LSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQ 373 (574)
Q Consensus 336 L~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~ 373 (574)
+++|++++.+|..|+||||+|+..|+.+++++|.+.|.
T Consensus 154 l~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 191 (192)
T 2rfm_A 154 LELGADISARDLTGLTAEASARIFGRQEVIKIFTEVRR 191 (192)
T ss_dssp HHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhccC
Confidence 99999999999999999999999999999999998763
No 49
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=9.1e-29 Score=255.51 Aligned_cols=194 Identities=16% Similarity=0.072 Sum_probs=157.0
Q ss_pred HHHHHHHHcCchhhHhhhcccCcccch-hccccCCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcchh
Q 008204 150 ESIYASAAFKMTEVVSVYEGWLLKVVR-EALVEDVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDEV 224 (574)
Q Consensus 150 elL~~A~~~~~~elv~~Ll~~gadvn~-~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~~ 224 (574)
..+++|+..+..+++++|++.|++++. + +.+|.||||+|+..|+.+ |+++|++++.++..|.||||.|+..+.
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~~--d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNLNIPV--DEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCSCSCC--STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSH
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCccccc--CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcc
Confidence 456788888889999999999999998 6 566999999999999955 888999999999999999999998642
Q ss_pred h--HHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHH----cCCHHHHHHHHhC--------------------C-C
Q 008204 225 S--SEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALD----SDDFELLNLLLNE--------------------Y-K 277 (574)
Q Consensus 225 ~--~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~----~g~~~~v~~Ll~~--------------------g-~ 277 (574)
. .++++.+++.+ +++++..|. .|+||||+|+. .|+.+++++|++. | +
T Consensus 177 ~~~~~~~~~ll~~~---~~~~~~~d~---~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~ 250 (327)
T 1sw6_A 177 NYDSGTFEALLDYL---YPCLILEDS---MNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK 250 (327)
T ss_dssp HHHTTCHHHHHHHH---GGGGGEECT---TCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-------
T ss_pred cccHHHHHHHHHhh---hccccCCCC---CCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCC
Confidence 1 23333333221 256888887 99999999999 8999999999987 4 2
Q ss_pred ---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q 008204 278 ---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVA 354 (574)
Q Consensus 278 ---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~ 354 (574)
.+..|+||||+|+. +++|++. ++|.+|..|+||||+|+..|+.++|++||++|||++.+|.+|+||||
T Consensus 251 ~~~~~~~g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~ 321 (327)
T 1sw6_A 251 PNDKNGERKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVD 321 (327)
T ss_dssp ---------CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGG
T ss_pred cccccccCCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 46789999999985 8899987 49999999999999999999999999999999999999999999999
Q ss_pred HHHHcC
Q 008204 355 ICRRMT 360 (574)
Q Consensus 355 ~A~~~g 360 (574)
+|+..|
T Consensus 322 ~A~~~g 327 (327)
T 1sw6_A 322 FGAGLE 327 (327)
T ss_dssp GTCC--
T ss_pred HHHhcC
Confidence 998654
No 50
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=7.5e-28 Score=242.64 Aligned_cols=181 Identities=18% Similarity=0.141 Sum_probs=151.3
Q ss_pred HHHHHcCchhhHhhhcccCcc--cchhccccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHH
Q 008204 153 YASAAFKMTEVVSVYEGWLLK--VVREALVEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKS 230 (574)
Q Consensus 153 ~~A~~~~~~elv~~Ll~~gad--vn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~ 230 (574)
+.|+..+..+.++.++..+.+ +|.+ +.+|.||||+|+..|+.++++..++
T Consensus 81 ~~a~~~~~~~~~~~l~~~~~~~~~n~~--d~~g~T~Lh~A~~~g~~~~v~~Ll~-------------------------- 132 (276)
T 4hbd_A 81 HPELVRRHLVTFRAMSARLLDYVVNIA--DSNGNTALHYSVSHANFPVVQQLLD-------------------------- 132 (276)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHTCC--CTTSCCHHHHHHHTTCHHHHHHHHH--------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCcCC--CCCCCCHHHHHHHCCCHHHHHHHHH--------------------------
Confidence 444555555666666665555 3433 4457777777777766655555443
Q ss_pred HHhhcccccCC-CcccCCCCCCCCchHHHHHH-----HcCCHHHHHHHHhCCC----CCCCCccHHHHHHHcCCHHHHHH
Q 008204 231 LRVKSNQESEA-NIKEVDPMHEKRVRRIHKAL-----DSDDFELLNLLLNEYK----VTLDDACALHYAAAYCNPKVFKE 300 (574)
Q Consensus 231 ~L~~~~~~~ga-~~n~~d~~~~~g~tpLh~A~-----~~g~~~~v~~Ll~~g~----~d~~g~tpLh~Aa~~g~~~~v~~ 300 (574)
. |+ +++..|. .|+||||+|+ ..++.+++++|++.|. .+..|+||||+|+..|+.++|++
T Consensus 133 ----~----g~~~~~~~~~---~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~ 201 (276)
T 4hbd_A 133 ----S----GVCKVDKQNR---AGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKA 201 (276)
T ss_dssp ----T----SCCCTTCCCT---TSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHH
T ss_pred ----C----CCCcCCCCCC---CCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 2 65 7888887 9999999999 6789999999999992 35679999999999999999999
Q ss_pred HHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCC
Q 008204 301 VHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLS-KGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQ 373 (574)
Q Consensus 301 LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~-~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~ 373 (574)
||+.| +|+|.+|..|+||||+|+..|+.+++++|++ .|++++.+|.+|+||||+|+..|+.+++++|++++.
T Consensus 202 Ll~~g-ad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 202 LLACE-ADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred HHhCC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 99998 9999999999999999999999999999999 899999999999999999999999999999998753
No 51
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=3.5e-27 Score=231.00 Aligned_cols=192 Identities=17% Similarity=0.127 Sum_probs=165.3
Q ss_pred ccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHH
Q 008204 180 VEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHK 259 (574)
Q Consensus 180 ~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~ 259 (574)
+.+|.||||+|+..|+.++++..++... ..|++++..|. .|+||||+
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~------------------------------~~~~~~~~~~~---~g~t~L~~ 51 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVK------------------------------GDLAFLNFQNN---LQQTPLHL 51 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----------------------------------CCCCCCCCT---TCCCHHHH
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhh------------------------------ccHHHhhccCC---CCCCHHHH
Confidence 4569999999999999887777665421 12567888887 99999999
Q ss_pred HHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCC------ccccCCCCChHHHHHHHcCCH
Q 008204 260 ALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLAD------INLKDARGRTVLHVAARRKEP 329 (574)
Q Consensus 260 A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~ad------vn~~d~~G~TpLh~Aa~~g~~ 329 (574)
|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|+..+ ++ ++..|..|+||||+|+..|+.
T Consensus 52 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 130 (236)
T 1ikn_D 52 AVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSC-TTPHLHSILKATNYNGHTCLHLASIHGYL 130 (236)
T ss_dssp HHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHST-TTTSSSCGGGCCCTTCCCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcc-cchhHHHHhhccCCCCCCHHHHHHHcCCH
Confidence 99999999999999999 3 4678999999999999999999999998 55 688899999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCChhhHHHHHhcCCCccchhhHHHHHHchhccCCCCCCcccchhhhccc
Q 008204 330 EVMVVLLSKGACSSETTP-DGQTAVAICRRMTRRKDYIEATKQGQETNKDWLCIDVLERDMTTNSTSGNLAMSSEVIDDV 408 (574)
Q Consensus 330 ~~v~~LL~~GAdvn~~d~-~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~~~~~~~ile~~~~~~~~~~~~~~~~~~~~~~ 408 (574)
+++++|+++|++++.++. .|+||||+|+..|+.+++++|++.|++++.. ...+.+++.+++..+.
T Consensus 131 ~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~--------------~~~g~tpl~~A~~~~~ 196 (236)
T 1ikn_D 131 GIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV--------------TYQGYSPYQLTWGRPS 196 (236)
T ss_dssp HHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCC--------------CTTCCCGGGGCTTSSC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc--------------cCCCCCHHHHHHccCc
Confidence 999999999999999998 9999999999999999999999999877632 1346677778888888
Q ss_pred chhhHHHHHhc
Q 008204 409 FQMNLDYLENR 419 (574)
Q Consensus 409 l~~~ll~le~~ 419 (574)
..+..++++.+
T Consensus 197 ~~~~~~Ll~~g 207 (236)
T 1ikn_D 197 TRIQQQLGQLT 207 (236)
T ss_dssp HHHHHHHHTTS
T ss_pred hHHHHHHHHcc
Confidence 88888888888
No 52
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=7.3e-27 Score=216.25 Aligned_cols=154 Identities=17% Similarity=0.126 Sum_probs=140.9
Q ss_pred CchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHH
Q 008204 183 VIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALD 262 (574)
Q Consensus 183 g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~ 262 (574)
|.||||.|+..|+.+++++.++. |++++..|. .|+||||+|+.
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~----------------------------------~~~~~~~~~---~g~t~L~~A~~ 45 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQ----------------------------------ENVINHTDE---EGFTPLMWAAA 45 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHH----------------------------------SSCTTCCCT---TSCCHHHHHHH
T ss_pred CcchHHHHHHCCCHHHHHHHHHc----------------------------------CCCcCCCCC---CCCCHHHHHHH
Confidence 67888888888887776665542 667787777 99999999999
Q ss_pred cCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhC
Q 008204 263 SDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSK 338 (574)
Q Consensus 263 ~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~ 338 (574)
.|+.+++++|++.| + .|..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 46 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 124 (167)
T 3v31_A 46 HGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCG-VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES 124 (167)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99999999999999 3 4688999999999999999999999998 99999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCC
Q 008204 339 GACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQE 374 (574)
Q Consensus 339 GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~ 374 (574)
|++++.+|..|+||||+|+..|+.+++++|.+++..
T Consensus 125 g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 125 GADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988753
No 53
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1.2e-26 Score=215.71 Aligned_cols=153 Identities=24% Similarity=0.231 Sum_probs=140.0
Q ss_pred CCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHH
Q 008204 182 DVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKAL 261 (574)
Q Consensus 182 ~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~ 261 (574)
.+.++|+.|+..|+.+++++.++. |++++..|. .|.||||+|+
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~----------------------------------g~~~~~~~~---~g~t~L~~A~ 55 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMAN----------------------------------GADVNAEDA---SGWTPLHLAA 55 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHT----------------------------------TCCTTCCCT---TSCCHHHHHH
T ss_pred cccchHHHHHHcCCHHHHHHHHHC----------------------------------CCCCCCCCC---CCCCHHHHHH
Confidence 366888888888887776665542 778888887 9999999999
Q ss_pred HcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 008204 262 DSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLS 337 (574)
Q Consensus 262 ~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~ 337 (574)
..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|++
T Consensus 56 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 134 (169)
T 2y1l_E 56 FNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNG-ADVNANDMEGHTPLHLAAMFGHLEIVEVLLK 134 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999 3 4678999999999999999999999998 9999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcC
Q 008204 338 KGACSSETTPDGQTAVAICRRMTRRKDYIEATKQG 372 (574)
Q Consensus 338 ~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G 372 (574)
+|++++.+|..|+||||+|+..|+.+++++|.+.|
T Consensus 135 ~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 135 NGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred cCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999876
No 54
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=6.4e-27 Score=215.15 Aligned_cols=154 Identities=18% Similarity=0.135 Sum_probs=139.2
Q ss_pred CCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHH
Q 008204 182 DVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKAL 261 (574)
Q Consensus 182 ~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~ 261 (574)
...||||.|+..|+.+++++.++. |++++..|. .|+||||+|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~----------------------------------~~~~~~~~~---~g~t~L~~A~ 46 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQN----------------------------------NVNVNAQNG---FGRTALQVMK 46 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTS----------------------------------CCCTTCCCT---TSCCHHHHCC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhC----------------------------------CCCccccCc---cCccHHHHHH
Confidence 356889999988888777766542 777888877 9999999999
Q ss_pred HcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 008204 262 DSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLS 337 (574)
Q Consensus 262 ~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~ 337 (574)
. |+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|++
T Consensus 47 ~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 124 (162)
T 1ihb_A 47 L-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQ-ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVK 124 (162)
T ss_dssp S-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred c-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9 9999999999999 4 4678999999999999999999999998 9999999999999999999999999999999
Q ss_pred CCCC-CCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCC
Q 008204 338 KGAC-SSETTPDGQTAVAICRRMTRRKDYIEATKQGQE 374 (574)
Q Consensus 338 ~GAd-vn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~ 374 (574)
+|++ ++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 125 ~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 125 HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred ccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 9998 699999999999999999999999999999974
No 55
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=2.7e-27 Score=234.75 Aligned_cols=196 Identities=15% Similarity=0.072 Sum_probs=162.4
Q ss_pred CchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCccc----CCCCCCCCchHHH
Q 008204 183 VIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKE----VDPMHEKRVRRIH 258 (574)
Q Consensus 183 g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~----~d~~~~~g~tpLh 258 (574)
|.||||+|+..|+.+.++..++ +++. .|++++. .|. .|+||||
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~--------------------------~l~~----~g~~i~~~~~~~d~---~g~t~L~ 48 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLE--------------------------YLRW----NSKYLTDSAYTEGS---TGKTCLM 48 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHH--------------------------HHHH----HTCCTTSGGGSBTT---TTBCHHH
T ss_pred CccHHHHHHHcCCHHHHHHHHH--------------------------HHHH----cCCCcccccccCCC---CCCCHHH
Confidence 7899999999998765443332 3332 2788887 676 9999999
Q ss_pred HHHHc---CCHHHHHHHHhCC-CC--------------CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCC-----
Q 008204 259 KALDS---DDFELLNLLLNEY-KV--------------TLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDAR----- 315 (574)
Q Consensus 259 ~A~~~---g~~~~v~~Ll~~g-~~--------------d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~----- 315 (574)
+|+.. |+.+++++|++.| ++ |..|+||||+|+..|+.+++++||+.| +++|.+|..
T Consensus 49 ~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~~~~ 127 (256)
T 2etb_A 49 KAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENG-ADVHLRACGRFFQK 127 (256)
T ss_dssp HHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCCSGGGSC
T ss_pred HHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcccccccccc
Confidence 99999 9999999999998 32 257999999999999999999999998 999999986
Q ss_pred --------CChHHHHHHHcCCHHHHHHHHh---CCCCCCCCCCCCCcHHHHHHH--cCChh-------hHHHHHhcCCCc
Q 008204 316 --------GRTVLHVAARRKEPEVMVVLLS---KGACSSETTPDGQTAVAICRR--MTRRK-------DYIEATKQGQET 375 (574)
Q Consensus 316 --------G~TpLh~Aa~~g~~~~v~~LL~---~GAdvn~~d~~G~TpL~~A~~--~g~~~-------~v~~l~~~G~~~ 375 (574)
|+||||+|+..|+.+++++|++ +|+++|.+|.+|+||||+|+. .++.+ ++++|++.|+++
T Consensus 128 ~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 128 HQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp CSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999 999999999999999999999 67777 899999988755
Q ss_pred cchhhHHHHHHchhccCCCCCCcccchhhhcccchhhHHHHHhc
Q 008204 376 NKDWLCIDVLERDMTTNSTSGNLAMSSEVIDDVFQMNLDYLENR 419 (574)
Q Consensus 376 ~~~~~~~~ile~~~~~~~~~~~~~~~~~~~~~~l~~~ll~le~~ 419 (574)
...... .......|.+++++++..+...+..++++++
T Consensus 208 ~~~~~~-------~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 208 CPTVQL-------EEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244 (256)
T ss_dssp STTCCG-------GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred cccccc-------ccccCCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 311100 0112234677888888888888888899887
No 56
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.94 E-value=2.6e-27 Score=244.60 Aligned_cols=205 Identities=14% Similarity=0.058 Sum_probs=162.8
Q ss_pred cCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHh----HHhhhhccccccc--------------cccc---cc
Q 008204 158 FKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYP----LCSFCIQRIARSN--------------IDNV---CL 216 (574)
Q Consensus 158 ~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~--------------~~~t---~l 216 (574)
+...+++++|++.|++++.+ +.+|.++++ |+.+ |+++|++++.... .+.+ .+
T Consensus 29 ~~~~dlv~~ll~~ga~i~~~--~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 101 (327)
T 1sw6_A 29 TFTHDLTSDFLSSPLKIMKA--LPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQ 101 (327)
T ss_dssp ECCTTCCCSTTTSSCCCEEC--BCCCCCCCH-----HHHHHHHHHHHHHHC-----------------------------
T ss_pred hhcCchHHHHhhCCcccccC--CCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchh
Confidence 44567899999999999987 456999887 6544 6667776544100 0000 01
Q ss_pred cccCcchhhHHHHHHHhhcccccCCCccc-CCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHH
Q 008204 217 EKELPDEVSSEIKSLRVKSNQESEANIKE-VDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAA 291 (574)
Q Consensus 217 ~~a~~~~~~~~i~~~L~~~~~~~ga~~n~-~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~ 291 (574)
|.+ ......+++++|+ +.|+++|. .|. .|+||||+|+..|+.++|++|+++| + .|..|+||||+|+.
T Consensus 102 ~~a-~~~~~~~~~~~l~----~~g~dvn~~~d~---~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~ 173 (327)
T 1sw6_A 102 HVS-FDSLLQEVNDAFP----NTQLNLNIPVDE---HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVK 173 (327)
T ss_dssp --C-HHHHHHHHHHHCT----TSCCCSCSCCST---TCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHH
T ss_pred HHH-HHhhHHHHHHHHH----hcCCCcccccCC---CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 222 2232456666665 45999999 787 9999999999999999999999999 4 46789999999999
Q ss_pred cCC---HHHHHHHHHcCCCCccccCCCCChHHHHHHH----cCCHHHHHHHHhCCC------------------------
Q 008204 292 YCN---PKVFKEVHNMGLADINLKDARGRTVLHVAAR----RKEPEVMVVLLSKGA------------------------ 340 (574)
Q Consensus 292 ~g~---~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~----~g~~~~v~~LL~~GA------------------------ 340 (574)
+|+ .++++.|++.+.++++.+|..|+||||+|+. .|+.+++++|++.|+
T Consensus 174 ~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~ 253 (327)
T 1sw6_A 174 SVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND 253 (327)
T ss_dssp SSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------
T ss_pred hcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccc
Confidence 998 7888999988778899999999999999999 899999999998743
Q ss_pred ---------------------CCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCccc
Q 008204 341 ---------------------CSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETNK 377 (574)
Q Consensus 341 ---------------------dvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~ 377 (574)
++|.+|.+|+||||+|+..|+.+++++|++.|++++.
T Consensus 254 ~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~ 311 (327)
T 1sw6_A 254 KNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFI 311 (327)
T ss_dssp ------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTC
T ss_pred ccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 6888899999999999999999999999999988763
No 57
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=3.3e-26 Score=212.86 Aligned_cols=156 Identities=17% Similarity=0.107 Sum_probs=138.8
Q ss_pred CchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCC-cccCCCCCCCCchHHHHHH
Q 008204 183 VIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEAN-IKEVDPMHEKRVRRIHKAL 261 (574)
Q Consensus 183 g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~-~n~~d~~~~~g~tpLh~A~ 261 (574)
+.+|||.|+..|+.++++..++. |.+ ++..|. .|+||||+|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~----------------------------------~~~~~~~~~~---~g~t~L~~A~ 44 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRK----------------------------------GDNLVNKPDE---RGFTPLIWAS 44 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTT----------------------------------CSGGGGCCCT---TSCCHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHc----------------------------------CcccccCCCC---CCCCHHHHHH
Confidence 45788888888887777666553 222 556665 9999999999
Q ss_pred HcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 008204 262 DSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLS 337 (574)
Q Consensus 262 ~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~ 337 (574)
..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|++
T Consensus 45 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (172)
T 3v30_A 45 AFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERD-VDINIYDWNGGTPLLYAVRGNHVKCVEALLA 123 (172)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999 3 4678999999999999999999999998 9999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 008204 338 KGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETN 376 (574)
Q Consensus 338 ~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 376 (574)
+|++++.+|..|+||||+|+..|+.+++++|.++|....
T Consensus 124 ~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (172)
T 3v30_A 124 RGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF 162 (172)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred cCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999986544
No 58
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=1.5e-26 Score=231.83 Aligned_cols=203 Identities=16% Similarity=0.084 Sum_probs=161.3
Q ss_pred ccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCC-CCCCCCchHHH
Q 008204 180 VEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVD-PMHEKRVRRIH 258 (574)
Q Consensus 180 ~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d-~~~~~g~tpLh 258 (574)
+..|.||||+|+..|+.++++..++... +.+++++..+ ..+..|+||||
T Consensus 10 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~------------------------------~~~~~~~~~~~~~~~~g~tpL~ 59 (273)
T 2pnn_A 10 RLYDRRSIFDAVAQSNCQELESLLPFLQ------------------------------RSKKRLTDSEFKDPETGKTCLL 59 (273)
T ss_dssp -CCCHHHHHHHHHTTCSSTTTTHHHHHH------------------------------HSCCCTTSGGGSCTTTCCCHHH
T ss_pred CcccchHHHHHHHcCCHHHHHHHHHHHh------------------------------hcccccCCcccccCcCCCCHHH
Confidence 5569999999999999775554443211 1144444211 02349999999
Q ss_pred HHHHc---CCHHHHHHHHhCC-C--------------CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCC------
Q 008204 259 KALDS---DDFELLNLLLNEY-K--------------VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDA------ 314 (574)
Q Consensus 259 ~A~~~---g~~~~v~~Ll~~g-~--------------~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~------ 314 (574)
+|+.. |+.++|++|++.| + .|..|+||||+|+..|+.++|++||+.| +++|.++.
T Consensus 60 ~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~~~~ 138 (273)
T 2pnn_A 60 KAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENG-ADVQAAANGDFFKK 138 (273)
T ss_dssp HHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBCSGGGSS
T ss_pred HHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCC-CCcCcccccccccc
Confidence 99987 9999999999987 2 3458999999999999999999999998 99999987
Q ss_pred --------CCChHHHHHHHcCCHHHHHHHHh---CCCCCCCCCCCCCcHHHHHHHcCC---------hhhHHHHHhcCCC
Q 008204 315 --------RGRTVLHVAARRKEPEVMVVLLS---KGACSSETTPDGQTAVAICRRMTR---------RKDYIEATKQGQE 374 (574)
Q Consensus 315 --------~G~TpLh~Aa~~g~~~~v~~LL~---~GAdvn~~d~~G~TpL~~A~~~g~---------~~~v~~l~~~G~~ 374 (574)
.|+||||+|+..|+.+++++|++ +|++++.+|.+|+||||+|+..|+ .+++++|++.|++
T Consensus 139 ~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~ 218 (273)
T 2pnn_A 139 TKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAK 218 (273)
T ss_dssp CSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhh
Confidence 79999999999999999999999 999999999999999999999988 6788888888765
Q ss_pred ccchhhHHHHHHchhccCCCCCCcccchhhhcccchhhHHHHHhcC
Q 008204 375 TNKDWLCIDVLERDMTTNSTSGNLAMSSEVIDDVFQMNLDYLENRG 420 (574)
Q Consensus 375 ~~~~~~~~~ile~~~~~~~~~~~~~~~~~~~~~~l~~~ll~le~~v 420 (574)
++..... .......|.+++++++..+...+..++++.+.
T Consensus 219 ~n~~~~~-------~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 219 LHPTLKL-------EEITNRKGLTPLALAASSGKIGVLAYILQREI 257 (273)
T ss_dssp HCTTCCG-------GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ccccccc-------ccccCCCCCCHHHHHHHhChHHHHHHHHHCCC
Confidence 4421100 01122446778888888888888888999884
No 59
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=5.9e-26 Score=207.29 Aligned_cols=147 Identities=22% Similarity=0.159 Sum_probs=132.3
Q ss_pred CchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHH
Q 008204 183 VIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALD 262 (574)
Q Consensus 183 g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~ 262 (574)
..++|+.|+..|+.++++..++. |++++ .+. .|.||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~----------------------------------g~~~~-~~~---~g~t~L~~A~~ 43 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMAN----------------------------------GAPFT-TDW---LGTSPLHLAAQ 43 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH----------------------------------TCCCC-CCT---TCCCHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHc----------------------------------CCCCC-cCC---CCCCHHHHHHH
Confidence 45788888888887776665542 55554 344 89999999999
Q ss_pred cCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhC
Q 008204 263 SDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSK 338 (574)
Q Consensus 263 ~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~ 338 (574)
.|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++
T Consensus 44 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 122 (153)
T 1awc_B 44 YGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHG-ADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122 (153)
T ss_dssp HTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99999999999999 3 4678999999999999999999999998 99999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCChhhHHHH
Q 008204 339 GACSSETTPDGQTAVAICRRMTRRKDYIEA 368 (574)
Q Consensus 339 GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l 368 (574)
|++++.+|..|+||||+|+..|+.+++++|
T Consensus 123 ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 123 GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999999999999999999999999999876
No 60
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=1.1e-25 Score=214.25 Aligned_cols=187 Identities=16% Similarity=0.127 Sum_probs=160.2
Q ss_pred CCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHH
Q 008204 182 DVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKAL 261 (574)
Q Consensus 182 ~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~ 261 (574)
.+.||||.|+..|..+.++..+.. .+++++..|. .|+||||+|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~---------------------------------~~~~~~~~~~---~g~t~L~~A~ 47 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQD---------------------------------TTYQVDEVDT---EGNTPLNIAV 47 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTC---------------------------------TTCCTTCCCT---TSCCHHHHHH
T ss_pred ccccHHHHHHHhccHHHHHHHHHc---------------------------------CCCCCCCCCC---CCCCHHHHHH
Confidence 477899999988887776665542 1447888777 9999999999
Q ss_pred HcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 008204 262 DSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLS 337 (574)
Q Consensus 262 ~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~ 337 (574)
..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.++++++..|..|.||||+|+..|+.+++++|++
T Consensus 48 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 127 (201)
T 3hra_A 48 HNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLE 127 (201)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999 4 467899999999999999999999977769999999999999999999999999999999
Q ss_pred CC-CCCCCCCCCCCcHHHHHHHcCC-----hhhHHHHHhcCCCccchhhHHHHHHchhccCCCCCCcccchhhhcccchh
Q 008204 338 KG-ACSSETTPDGQTAVAICRRMTR-----RKDYIEATKQGQETNKDWLCIDVLERDMTTNSTSGNLAMSSEVIDDVFQM 411 (574)
Q Consensus 338 ~G-Advn~~d~~G~TpL~~A~~~g~-----~~~v~~l~~~G~~~~~~~~~~~ile~~~~~~~~~~~~~~~~~~~~~~l~~ 411 (574)
+| ++++.+|..|+||||+|+..++ .+++++|++.|++++... ..+.+++..++..++..+
T Consensus 128 ~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~--------------~~g~t~l~~A~~~~~~~~ 193 (201)
T 3hra_A 128 DGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKD--------------NSGRTAMDYANQKGYTEI 193 (201)
T ss_dssp HCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCC--------------TTSCCHHHHHHHHTCHHH
T ss_pred cCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccC--------------CCCCCHHHHHHHcCCHhH
Confidence 99 9999999999999999999988 899999999998776311 235566677777777777
Q ss_pred hHHHHHh
Q 008204 412 NLDYLEN 418 (574)
Q Consensus 412 ~ll~le~ 418 (574)
..++++.
T Consensus 194 ~~~Ll~~ 200 (201)
T 3hra_A 194 SKILAQY 200 (201)
T ss_dssp HHHHHTC
T ss_pred HHHHHhc
Confidence 7766654
No 61
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=3e-26 Score=211.68 Aligned_cols=155 Identities=19% Similarity=0.188 Sum_probs=138.8
Q ss_pred cCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHH
Q 008204 181 EDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKA 260 (574)
Q Consensus 181 ~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A 260 (574)
.+|.++|+.|+..|+.++++..++.. +.+++..+. .|+||||+|
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~---------------------------------~~~~~~~~~---~g~t~L~~A 49 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQ---------------------------------SVNCRDIEG---RQSTPLHFA 49 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTT---------------------------------TTTCCCTTT---TCCCHHHHH
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcC---------------------------------CCCcccccc---CCCCHHHHH
Confidence 34789999999999988888776531 334555565 899999999
Q ss_pred HHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHH
Q 008204 261 LDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLL 336 (574)
Q Consensus 261 ~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL 336 (574)
+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+
T Consensus 50 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 128 (165)
T 3twr_A 50 AGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHG-AVVNVADLWKFTPLHEAAAKGKYEICKLLL 128 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999 3 4678999999999999999999999998 999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCC
Q 008204 337 SKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQ 373 (574)
Q Consensus 337 ~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~ 373 (574)
++|++++.+|.+|+||||+|+. ++.+++++|.++|+
T Consensus 129 ~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 129 QHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 9999999999999999999877 99999999999885
No 62
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=4.6e-26 Score=213.65 Aligned_cols=159 Identities=19% Similarity=0.219 Sum_probs=142.5
Q ss_pred CCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHH
Q 008204 182 DVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKAL 261 (574)
Q Consensus 182 ~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~ 261 (574)
.+.++|+.|+..|+.++++..++. .+.+++..|. .|+||||+|+
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~---------------------------------~~~~~~~~~~---~g~t~L~~A~ 47 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDN---------------------------------TENDLNQGDD---HGFSPLHWAC 47 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHC---------------------------------TTSCTTCCCT---TSCCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhc---------------------------------CcccccccCC---CCCCHHHHHH
Confidence 367788888888887777766552 1456777776 9999999999
Q ss_pred HcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 008204 262 DSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLS 337 (574)
Q Consensus 262 ~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~ 337 (574)
..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|++
T Consensus 48 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~ 126 (179)
T 3f6q_A 48 REGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYK-ADINAVNEHGNVPLHYACFWGQDQVAEDLVA 126 (179)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999 3 4678999999999999999999999998 9999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCccc
Q 008204 338 KGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETNK 377 (574)
Q Consensus 338 ~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~ 377 (574)
+|++++.+|..|+||||+|+..++..+++.|.+.|++++.
T Consensus 127 ~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 127 NGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp TTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSC
T ss_pred CCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 9999999999999999999999999999999999998863
No 63
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=4.7e-26 Score=203.97 Aligned_cols=130 Identities=17% Similarity=0.091 Sum_probs=124.0
Q ss_pred CCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCC
Q 008204 240 EANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDAR 315 (574)
Q Consensus 240 ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~ 315 (574)
+++++..+. .|.||||+|+..|+.+++++|++.| + .|..|+||||+|+. |+.+++++|+++| +++|.+|..
T Consensus 2 ~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~~~ 76 (136)
T 1d9s_A 2 SPGIHMLGG---SSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHG-AEPNCADPA 76 (136)
T ss_dssp CCCCSCCCC---CCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHT-CCSSCCBTT
T ss_pred CCCccCCCC---CCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCC-CCCCCcCCC
Confidence 567888887 9999999999999999999999999 3 46789999999999 9999999999998 999999999
Q ss_pred -CChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCC
Q 008204 316 -GRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQE 374 (574)
Q Consensus 316 -G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~ 374 (574)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++|++
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 77 TLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999874
No 64
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=1.1e-25 Score=209.26 Aligned_cols=163 Identities=17% Similarity=0.050 Sum_probs=141.6
Q ss_pred HHHHHHHHcCchhhHhhhcccCcc-cchhccccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHH
Q 008204 150 ESIYASAAFKMTEVVSVYEGWLLK-VVREALVEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEI 228 (574)
Q Consensus 150 elL~~A~~~~~~elv~~Ll~~gad-vn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i 228 (574)
.+|+.|+..|..++++++++.+.+ ++.+ +..|.||||+|+..|+.+++++.++.
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~----------------------- 58 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDNLVNKP--DERGFTPLIWASAFGEIETVRFLLEW----------------------- 58 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSGGGGCC--CTTSCCHHHHHHHTTCHHHHHHHHHH-----------------------
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcccccCC--CCCCCCHHHHHHHcCCHHHHHHHHHc-----------------------
Confidence 368999999999999999999887 5555 55699999999999887766665542
Q ss_pred HHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHc
Q 008204 229 KSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNM 304 (574)
Q Consensus 229 ~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~ 304 (574)
|++++..|. .|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.
T Consensus 59 -----------g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 124 (172)
T 3v30_A 59 -----------GADPHILAK---ERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLAR 124 (172)
T ss_dssp -----------TCCTTCCCT---TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred -----------CCCchhhcc---cCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 778888887 9999999999999999999999999 4 467899999999999999999999999
Q ss_pred CCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcH
Q 008204 305 GLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTA 352 (574)
Q Consensus 305 g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~Tp 352 (574)
| ++++.+|..|+||||+|+..|+.+++++|+++|+++..++..|.||
T Consensus 125 g-a~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 125 G-ADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred C-CCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 8 9999999999999999999999999999999999999999999987
No 65
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=2.8e-25 Score=202.93 Aligned_cols=150 Identities=14% Similarity=0.072 Sum_probs=136.3
Q ss_pred CchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHH
Q 008204 183 VIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALD 262 (574)
Q Consensus 183 g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~ 262 (574)
+.|+||.|+..|+.++++..++. . +.+++..|. .|+||||+ +.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~--------------------------------~~~~~~~~~---~g~t~L~~-~~ 44 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-E--------------------------------LVHPDALNR---FGKTALQV-MM 44 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-T--------------------------------CCCTTCCCT---TSCCHHHH-SC
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-h--------------------------------CcCccccCC---CCCcHHHH-HH
Confidence 45889999998888877766553 1 456777777 99999999 99
Q ss_pred cCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhC
Q 008204 263 SDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSK 338 (574)
Q Consensus 263 ~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~ 338 (574)
.|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++
T Consensus 45 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 45 FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHG-ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc
Confidence 99999999999999 3 4678999999999999999999999998 99999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhc
Q 008204 339 GACSSETTPDGQTAVAICRRMTRRKDYIEATKQ 371 (574)
Q Consensus 339 GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~ 371 (574)
++++.+|.+|+||||+|+..|+.+++++|+++
T Consensus 124 -~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 124 -SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp -SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred -cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999999999999999999999999864
No 66
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.93 E-value=3.3e-25 Score=203.65 Aligned_cols=153 Identities=18% Similarity=0.066 Sum_probs=135.8
Q ss_pred HHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHH
Q 008204 148 VIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSE 227 (574)
Q Consensus 148 ~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~ 227 (574)
..++|+.|+..|..+++++|+++|++++.+ +..|.||||+|+. |+.++++..++
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~g~t~L~~A~~-~~~~~v~~Ll~----------------------- 58 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQ--NGFGRTALQVMKL-GNPEIARRLLL----------------------- 58 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCC--CTTSCCHHHHCCS-SCHHHHHHHHH-----------------------
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCcccc--CccCccHHHHHHc-CcHHHHHHHHH-----------------------
Confidence 468999999999999999999999999887 5569999999887 77665555443
Q ss_pred HHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHH
Q 008204 228 IKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHN 303 (574)
Q Consensus 228 i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~ 303 (574)
. |++++..|. .|+||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++
T Consensus 59 -------~----g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 124 (162)
T 1ihb_A 59 -------R----GANPDLKDR---TGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVK 124 (162)
T ss_dssp -------T----TCCTTCCCT---TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred -------c----CCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 2 778888887 9999999999999999999999999 3 46789999999999999999999999
Q ss_pred cCCCC-ccccCCCCChHHHHHHHcCCHHHHHHHHhCCCC
Q 008204 304 MGLAD-INLKDARGRTVLHVAARRKEPEVMVVLLSKGAC 341 (574)
Q Consensus 304 ~g~ad-vn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAd 341 (574)
.| ++ ++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 125 ~g-~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 125 HT-ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HS-CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred cc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99 76 799999999999999999999999999999986
No 67
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=1.3e-25 Score=222.84 Aligned_cols=200 Identities=16% Similarity=0.082 Sum_probs=161.6
Q ss_pred CCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCC-CCCCCchHHHHH
Q 008204 182 DVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDP-MHEKRVRRIHKA 260 (574)
Q Consensus 182 ~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~-~~~~g~tpLh~A 260 (574)
.+.++||.|+..|+.+.++..++ ++++. |++++..+. .+..|+||||+|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~--------------------------~l~~~----~~~~~~~~~~~~~~g~t~L~~A 53 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLS--------------------------FLLTH----KKRLTDEEFREPSTGKTCLPKA 53 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHH--------------------------HHHHH----TCCTTSGGGSCTTTCCCHHHHH
T ss_pred chHHHHHHHHHhCCHHHHHHHHH--------------------------HHHhc----CCCcchhhhhccCCCCcHHHHH
Confidence 37899999999998876554443 22222 667776652 234899999999
Q ss_pred H---HcCCHHHHHHHHhCC-C--------------CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccC---------
Q 008204 261 L---DSDDFELLNLLLNEY-K--------------VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKD--------- 313 (574)
Q Consensus 261 ~---~~g~~~~v~~Ll~~g-~--------------~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d--------- 313 (574)
+ ..|+.+++++|++.| + .|..|+||||+|+..|+.++|++||+.| +++|.+|
T Consensus 54 ~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~~~~~~ 132 (260)
T 3jxi_A 54 LLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKG-ADVHAQARGRFFQPKD 132 (260)
T ss_dssp HTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCEECCCSSSC
T ss_pred HHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCC-CCcCccccccccCccc
Confidence 9 779999999999987 2 1238999999999999999999999998 9999999
Q ss_pred -----CCCChHHHHHHHcCCHHHHHHHHh---CCCCCCCCCCCCCcHHHHHHHcCC---------hhhHHHHHhcCCCcc
Q 008204 314 -----ARGRTVLHVAARRKEPEVMVVLLS---KGACSSETTPDGQTAVAICRRMTR---------RKDYIEATKQGQETN 376 (574)
Q Consensus 314 -----~~G~TpLh~Aa~~g~~~~v~~LL~---~GAdvn~~d~~G~TpL~~A~~~g~---------~~~v~~l~~~G~~~~ 376 (574)
..|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..++ .++++.|++.|++++
T Consensus 133 ~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 133 EGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp CCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccc
Confidence 689999999999999999999999 999999999999999999999887 578888888886553
Q ss_pred chhhHHHHHHchhccCCCCCCcccchhhhcccchhhHHHHHhc
Q 008204 377 KDWLCIDVLERDMTTNSTSGNLAMSSEVIDDVFQMNLDYLENR 419 (574)
Q Consensus 377 ~~~~~~~ile~~~~~~~~~~~~~~~~~~~~~~l~~~ll~le~~ 419 (574)
..... .......|.+++++++..+...+..++++++
T Consensus 213 ~~~~~-------~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 248 (260)
T 3jxi_A 213 PDTNL-------EALLNNDGLSPLMMAAKTGKIGIFQHIIRRE 248 (260)
T ss_dssp TTCCG-------GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred cccch-------hhcccCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 21100 0112245677788888888888888899887
No 68
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.92 E-value=1.9e-24 Score=200.72 Aligned_cols=154 Identities=16% Similarity=0.182 Sum_probs=138.8
Q ss_pred hhHHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhh
Q 008204 146 NYVIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVS 225 (574)
Q Consensus 146 ~~~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~ 225 (574)
....++|+.|+..|..+++++|+++|++++.+ +.+|.||||+|+..|+.++++..++.
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~-------------------- 69 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGADVNAE--DASGWTPLHLAAFNGHLEIVEVLLKN-------------------- 69 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHT--------------------
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHc--------------------
Confidence 34678999999999999999999999999987 55699999999999887766655442
Q ss_pred HHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHH
Q 008204 226 SEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEV 301 (574)
Q Consensus 226 ~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~L 301 (574)
|++++..|. .|.||||+|+..|+.+++++|++.| + .|..|.||||+|+..|+.+++++|
T Consensus 70 --------------g~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 132 (169)
T 2y1l_E 70 --------------GADVNAVDH---AGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVL 132 (169)
T ss_dssp --------------TCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred --------------CCCCCccCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 778888887 9999999999999999999999999 3 467899999999999999999999
Q ss_pred HHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCC
Q 008204 302 HNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKG 339 (574)
Q Consensus 302 L~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~G 339 (574)
+++| ++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 133 l~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 133 LKNG-ADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHcC-CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9998 999999999999999999999999999999987
No 69
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.92 E-value=1.4e-24 Score=205.76 Aligned_cols=159 Identities=18% Similarity=0.165 Sum_probs=141.9
Q ss_pred cccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCh
Q 008204 243 IKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRT 318 (574)
Q Consensus 243 ~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~T 318 (574)
+|..|. .|+||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| ++++.+|..|+|
T Consensus 28 ~n~~d~---~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t 103 (192)
T 2rfm_A 28 RNYRDS---YNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKG-SNVNTKDFSGKT 103 (192)
T ss_dssp HTCCCT---TCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTSCC
T ss_pred HhCcCC---CCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCc
Confidence 455666 9999999999999999999999998 3 4678999999999999999999999998 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCccchhhHHHHHHchhccCCCCCCc
Q 008204 319 VLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETNKDWLCIDVLERDMTTNSTSGNL 398 (574)
Q Consensus 319 pLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~~~~~~~ile~~~~~~~~~~~~ 398 (574)
|||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+++.... ..+.+
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~--------------~~g~t 169 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARD--------------LTGLT 169 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC--------------TTSCB
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC--------------CCCCC
Confidence 9999999999999999999999999999999999999999999999999999998765311 23556
Q ss_pred ccchhhhcccchhhHHHHHhc
Q 008204 399 AMSSEVIDDVFQMNLDYLENR 419 (574)
Q Consensus 399 ~~~~~~~~~~l~~~ll~le~~ 419 (574)
++..++..+...+..++++.+
T Consensus 170 ~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 170 AEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHhCcHHHHHHHHhcc
Confidence 677777777777777777765
No 70
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=3.5e-24 Score=191.76 Aligned_cols=121 Identities=23% Similarity=0.160 Sum_probs=115.6
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHc
Q 008204 251 EKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARR 326 (574)
Q Consensus 251 ~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~ 326 (574)
..|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNG-ADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHc
Confidence 37899999999999999999999999 4 4678999999999999999999999998 99999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcC
Q 008204 327 KEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQG 372 (574)
Q Consensus 327 g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G 372 (574)
|+.+++++|+++|++++.+|.+|+||||+|+..|+.+++++|.+.|
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999876
No 71
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=7.2e-25 Score=215.77 Aligned_cols=132 Identities=20% Similarity=0.207 Sum_probs=116.8
Q ss_pred CCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCC
Q 008204 240 EANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDAR 315 (574)
Q Consensus 240 ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~ 315 (574)
|++++.. . .|.||||+|+..|+.++|++|++.| + .|..|+||||+|+..|+.+++++||++| +++|.+|..
T Consensus 28 g~~~~~~-~---~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~ 102 (239)
T 1ycs_B 28 GMRVKFN-P---LPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFG-VNVNAADSD 102 (239)
T ss_dssp -------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCTT
T ss_pred CCCcccC-c---hhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCC
Confidence 7777643 4 8999999999999999999999999 4 4678999999999999999999999998 999999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC-cHHHHH--HHcCChhhHHHHHhcCCCcc
Q 008204 316 GRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQ-TAVAIC--RRMTRRKDYIEATKQGQETN 376 (574)
Q Consensus 316 G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~-TpL~~A--~~~g~~~~v~~l~~~G~~~~ 376 (574)
|+||||+|+..|+.+++++|+++|++++.+|..|. ||||+| +..|+.+++++|++.|+++.
T Consensus 103 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 103 GWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccc
Confidence 99999999999999999999999999999998887 999999 77899999999999987665
No 72
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.91 E-value=2.2e-24 Score=202.19 Aligned_cols=162 Identities=14% Similarity=0.103 Sum_probs=143.6
Q ss_pred HHHHHHHHHHcCchhhHhhhccc-CcccchhccccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhH
Q 008204 148 VIESIYASAAFKMTEVVSVYEGW-LLKVVREALVEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSS 226 (574)
Q Consensus 148 ~~elL~~A~~~~~~elv~~Ll~~-gadvn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~ 226 (574)
..++|+.|+..+..+++++|++. +.+++.. +.+|.||||+|+..|+.++++..++.
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~--------------------- 61 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQG--DDHGFSPLHWACREGRSAVVEMLIMR--------------------- 61 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHT---------------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCccccccc--CCCCCCHHHHHHHcCcHHHHHHHHHc---------------------
Confidence 45679999999999999999987 6677776 55699999999999887766655442
Q ss_pred HHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHH
Q 008204 227 EIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVH 302 (574)
Q Consensus 227 ~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL 302 (574)
|++++..|. .|.||||+|+..|+.+++++|++.| + .|..|.||||+|+..|+.+++++|+
T Consensus 62 -------------g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 125 (179)
T 3f6q_A 62 -------------GARINVMNR---GDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLV 125 (179)
T ss_dssp -------------TCCTTCCCT---TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -------------CCCCCCcCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 788888887 9999999999999999999999999 3 4688999999999999999999999
Q ss_pred HcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC
Q 008204 303 NMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDG 349 (574)
Q Consensus 303 ~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G 349 (574)
++| ++++.+|..|+||||+|+..++.+++++|+++|++++..+..+
T Consensus 126 ~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 126 ANG-ALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp HTT-CCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred HCC-CCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCccc
Confidence 998 9999999999999999999999999999999999999877654
No 73
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.91 E-value=3.4e-24 Score=198.17 Aligned_cols=154 Identities=17% Similarity=0.067 Sum_probs=139.4
Q ss_pred HHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHH
Q 008204 150 ESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIK 229 (574)
Q Consensus 150 elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~ 229 (574)
++||.|+..|..+++++|++.+.+++.+ +.+|.||||+|+..|+.++++..++.
T Consensus 5 t~L~~A~~~g~~~~v~~ll~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~------------------------ 58 (167)
T 3v31_A 5 LSVHQLAAQGEMLYLATRIEQENVINHT--DEEGFTPLMWAAAHGQIAVVEFLLQN------------------------ 58 (167)
T ss_dssp CCHHHHHHTTCHHHHHHHHHHSSCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHT------------------------
T ss_pred chHHHHHHCCCHHHHHHHHHcCCCcCCC--CCCCCCHHHHHHHCCCHHHHHHHHHc------------------------
Confidence 4799999999999999999999999887 55699999999999887776655542
Q ss_pred HHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcC
Q 008204 230 SLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMG 305 (574)
Q Consensus 230 ~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g 305 (574)
|++++..+. .|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.|
T Consensus 59 ----------g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 125 (167)
T 3v31_A 59 ----------GADPQLLGK---GRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG 125 (167)
T ss_dssp ----------TCCTTCCCT---TCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred ----------CCCCCCcCC---CCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 778888887 9999999999999999999999998 3 4678999999999999999999999998
Q ss_pred CCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCC
Q 008204 306 LADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSS 343 (574)
Q Consensus 306 ~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn 343 (574)
++++.+|..|+||||+|+..|+.+++++|+++++++.
T Consensus 126 -~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 126 -ADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp -CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred -CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999887654
No 74
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.91 E-value=1.4e-23 Score=191.43 Aligned_cols=146 Identities=13% Similarity=0.104 Sum_probs=132.7
Q ss_pred HHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHH
Q 008204 149 IESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEI 228 (574)
Q Consensus 149 ~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i 228 (574)
.++|+.|+..|..+++++|+++|.+++. +..|.||||+|+..|+.++++..++.
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~----------------------- 56 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFTT---DWLGTSPLHLAAQYGHFSTTEVLLRA----------------------- 56 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCCC---CTTCCCHHHHHHHHTCHHHHHHHHTT-----------------------
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHHc-----------------------
Confidence 5789999999999999999999998874 56799999999999887766655442
Q ss_pred HHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHc
Q 008204 229 KSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNM 304 (574)
Q Consensus 229 ~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~ 304 (574)
|++++..+. .|+||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.
T Consensus 57 -----------g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 122 (153)
T 1awc_B 57 -----------GVSRDARTK---VDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122 (153)
T ss_dssp -----------TCCTTCCCT---TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred -----------CCCCCCCCC---CCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 778888887 9999999999999999999999999 4 467899999999999999999999999
Q ss_pred CCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 008204 305 GLADINLKDARGRTVLHVAARRKEPEVMVVL 335 (574)
Q Consensus 305 g~advn~~d~~G~TpLh~Aa~~g~~~~v~~L 335 (574)
| ++++.+|..|+||||+|+..|+.+++++|
T Consensus 123 g-a~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 123 G-ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred C-CCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 8 99999999999999999999999999987
No 75
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=3.2e-25 Score=218.27 Aligned_cols=173 Identities=13% Similarity=0.024 Sum_probs=124.5
Q ss_pred HHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHH
Q 008204 148 VIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSE 227 (574)
Q Consensus 148 ~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~ 227 (574)
+.++|+.|+..+..+.++.|+++|++++. ...|.||||+|+..|+.++++..++.
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~g~~~~~---~~~~~t~L~~A~~~g~~~~v~~Ll~~---------------------- 59 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAHGMRVKF---NPLPLALLLDSSLEGEFDLVQRIIYE---------------------- 59 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTST----------------------
T ss_pred ccccCchhhhhhhHHHHHHHhccCCCccc---CchhhHHHHHHHHcCCHHHHHHHHHc----------------------
Confidence 56789999999999999999999999886 35588999999998888777766542
Q ss_pred HHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHH
Q 008204 228 IKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHN 303 (574)
Q Consensus 228 i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~ 303 (574)
|+++|..|. .|.||||+|+..|+.+++++|+++| + .|..|+||||+|+..|+.+++++|++
T Consensus 60 ------------g~~~~~~d~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 124 (239)
T 1ycs_B 60 ------------VDDPSLPND---EGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVE 124 (239)
T ss_dssp ------------TSSCCCCCT---TSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred ------------CCCCCCcCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 778888887 9999999999999999999999999 4 46789999999999999999999999
Q ss_pred cCCCCccccCCCCC-hHHHHH--HHcCCHHHHHHHHhCCCCCCCC---------CCCCCcHHHHHHHcCC
Q 008204 304 MGLADINLKDARGR-TVLHVA--ARRKEPEVMVVLLSKGACSSET---------TPDGQTAVAICRRMTR 361 (574)
Q Consensus 304 ~g~advn~~d~~G~-TpLh~A--a~~g~~~~v~~LL~~GAdvn~~---------d~~G~TpL~~A~~~g~ 361 (574)
+| ++++.++..|. ||||+| +..|+.+++++|+++|++++.. +..|.+|++++...|.
T Consensus 125 ~g-a~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 125 SG-AAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp TT-CCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred cC-CCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 98 99999998887 999999 8889999999999999999876 5567788777765554
No 76
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.2e-23 Score=184.00 Aligned_cols=122 Identities=30% Similarity=0.352 Sum_probs=117.2
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcC
Q 008204 252 KRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRK 327 (574)
Q Consensus 252 ~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g 327 (574)
+|+||||+|+..|+.+++++|++.| + .|..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcC
Confidence 5899999999999999999999998 3 4678999999999999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCC
Q 008204 328 EPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQE 374 (574)
Q Consensus 328 ~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~ 374 (574)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999974
No 77
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.91 E-value=1.5e-23 Score=193.41 Aligned_cols=153 Identities=20% Similarity=0.170 Sum_probs=131.6
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhCC-----CCCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHH
Q 008204 251 EKRVRRIHKALDSDDFELLNLLLNEY-----KVTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAAR 325 (574)
Q Consensus 251 ~~g~tpLh~A~~~g~~~~v~~Ll~~g-----~~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~ 325 (574)
..|.||||.|+..|+.++++.|++.+ ..+..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+.
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG-ADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHH
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcC-CCCCccCCCCCCHHHHHHH
Confidence 38899999999999999999999976 24577899999999999999999999998 9999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCccchhhHHHHHHchhccCCCCCCcccchhhh
Q 008204 326 RKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETNKDWLCIDVLERDMTTNSTSGNLAMSSEVI 405 (574)
Q Consensus 326 ~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~~~~~~~ile~~~~~~~~~~~~~~~~~~~ 405 (574)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+++.... ..+.+++.++..
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~--------------~~g~t~l~~a~~ 150 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKN--------------RDGNTPLDLVKD 150 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--------------TTSCCTGGGSCT
T ss_pred cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC--------------CCCCChhHhHhc
Confidence 999999999999999999999999999999999999999999999998775311 234455555443
Q ss_pred cccchhhHHHHHhc
Q 008204 406 DDVFQMNLDYLENR 419 (574)
Q Consensus 406 ~~~l~~~ll~le~~ 419 (574)
++..+..++++++
T Consensus 151 -~~~~i~~~L~~~g 163 (165)
T 3twr_A 151 -GDTDIQDLLRGDA 163 (165)
T ss_dssp -TCHHHHHHHHTC-
T ss_pred -CChHHHHHHhhcc
Confidence 4555555555544
No 78
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=1e-24 Score=195.25 Aligned_cols=129 Identities=19% Similarity=0.129 Sum_probs=113.5
Q ss_pred CCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCC
Q 008204 240 EANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDAR 315 (574)
Q Consensus 240 ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~ 315 (574)
|+|+ ..|. .|+||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| ++++.+|..
T Consensus 1 G~d~-~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~ 75 (137)
T 3c5r_A 1 GIDP-FTNH---RGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK-ALVNTTGYQ 75 (137)
T ss_dssp ---C-CCCT---TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCGG
T ss_pred CCCC-CcCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CcccCcCCC
Confidence 5677 5555 9999999999999999999999999 4 4678999999999999999999999998 999999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCC
Q 008204 316 GRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQ 373 (574)
Q Consensus 316 G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~ 373 (574)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..+..+++.++.+.+.
T Consensus 76 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 76 NDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 9999999999999999999999999999999999999999998888777777666554
No 79
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.90 E-value=3.9e-27 Score=230.99 Aligned_cols=176 Identities=11% Similarity=0.020 Sum_probs=125.5
Q ss_pred CCchHHHHHHHcCCHh----HHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHH
Q 008204 182 DVIPILVAALQCQLYP----LCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 257 (574)
Q Consensus 182 ~g~t~L~~A~~~g~~~----Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpL 257 (574)
++.||||+|+..|+.+ |++.|++++.++..|.||||.|+..+ ..+++++|++. |+++|..|. .|+|||
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g-~~~~v~~Ll~~----ga~~n~~d~---~g~tpL 91 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGA-NYSIVDFLITA----GANVNSPDS---HGWTPL 91 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHHT----TCCTTCCCT---TCCCHH
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHHC----CCCCCCCCC---CCCCHH
Confidence 3455555555555533 33444444444444444444444444 44455555533 888888887 888899
Q ss_pred HHHHHcCCHHHHHHHHhCC-CC---C-CCCccHHHHH--HHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHH
Q 008204 258 HKALDSDDFELLNLLLNEY-KV---T-LDDACALHYA--AAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPE 330 (574)
Q Consensus 258 h~A~~~g~~~~v~~Ll~~g-~~---d-~~g~tpLh~A--a~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~ 330 (574)
|+|+..|+.+++++|++.| ++ + ..|+||||+| +..|+.+++++|++.| ++++.+|..|.||||.++..+..
T Consensus 92 h~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~~l~~~~~~~~~- 169 (229)
T 2vge_A 92 HCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVE-QSMGLMNSGAVYALWDYSAEFGD- 169 (229)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHH-HHTTTSGGGEEEESSCBCCSSTT-
T ss_pred HHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcC-CCcccccCCchHHHHHHhhcccc-
Confidence 9998888889999888888 33 2 5788899888 8888888888888888 88888888888888866555433
Q ss_pred HHHHHHhCCCC--CCCCCCCCCcHHHHHHHcCChhhHHHHH
Q 008204 331 VMVVLLSKGAC--SSETTPDGQTAVAICRRMTRRKDYIEAT 369 (574)
Q Consensus 331 ~v~~LL~~GAd--vn~~d~~G~TpL~~A~~~g~~~~v~~l~ 369 (574)
++|++.|++ ++.+|.+|+||||+|+..|+.++|+...
T Consensus 170 --~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 170 --ELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp --BCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred --ccCccccccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence 577888888 6778888999999999988888776543
No 80
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=4e-24 Score=196.05 Aligned_cols=126 Identities=19% Similarity=0.113 Sum_probs=115.5
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCh-HHHHHH
Q 008204 250 HEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRT-VLHVAA 324 (574)
Q Consensus 250 ~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~T-pLh~Aa 324 (574)
+..|.||||+|+..|+.++|++|++.| + .|..|+||||+|+ .|+.+++++|++.| +++|.+|..|+| |||+|+
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g-~~~~~~d~~g~ttpL~~A~ 86 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG-AEPNCADPATLTRPVHDAA 86 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTT-CCCCCCCTTTCCCHHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHH
Confidence 348999999999999999999999999 3 4678999999986 99999999999998 999999999999 999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCccc
Q 008204 325 RRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETNK 377 (574)
Q Consensus 325 ~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~ 377 (574)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++..
T Consensus 87 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~ 139 (156)
T 1bi7_B 87 REGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG 139 (156)
T ss_dssp HHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----
T ss_pred HCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc
Confidence 99999999999999999999999999999999999999999999999998763
No 81
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.90 E-value=1.1e-23 Score=212.23 Aligned_cols=159 Identities=13% Similarity=0.107 Sum_probs=141.4
Q ss_pred cccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCC-----CCCCCccHHHHHH-----HcCCHHHHHHHHHcCCCCcccc
Q 008204 243 IKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEYK-----VTLDDACALHYAA-----AYCNPKVFKEVHNMGLADINLK 312 (574)
Q Consensus 243 ~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g~-----~d~~g~tpLh~Aa-----~~g~~~~v~~LL~~g~advn~~ 312 (574)
+|..|. +|+||||+|+..|+.++|++|++.|. .|..|.||||+|+ ..++.++++.|++.| ++++..
T Consensus 104 ~n~~d~---~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g-~~~~~~ 179 (276)
T 4hbd_A 104 VNIADS---NGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLG-NINAKA 179 (276)
T ss_dssp HTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHS-CTTCCC
T ss_pred CcCCCC---CCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcC-CCcccc
Confidence 666676 99999999999999999999999992 3678999999999 668999999999999 999999
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHh-cCCCccchhhHHHHHHchhcc
Q 008204 313 DARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATK-QGQETNKDWLCIDVLERDMTT 391 (574)
Q Consensus 313 d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~-~G~~~~~~~~~~~ile~~~~~ 391 (574)
|..|+||||+|+..|+.++|++|+++|+++|.+|.+|+||||+|+..|+.+++++|++ .|++++..
T Consensus 180 ~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~------------- 246 (276)
T 4hbd_A 180 SQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLT------------- 246 (276)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCC-------------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCc-------------
Confidence 9999999999999999999999999999999999999999999999999999999999 78876531
Q ss_pred CCCCCCcccchhhhcccchhhHHHHHhc
Q 008204 392 NSTSGNLAMSSEVIDDVFQMNLDYLENR 419 (574)
Q Consensus 392 ~~~~~~~~~~~~~~~~~l~~~ll~le~~ 419 (574)
...|.+++..++..+...+..++++..
T Consensus 247 -d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 247 -DRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp -CTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred -CCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 124567777777778888887777765
No 82
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.90 E-value=6.4e-24 Score=208.06 Aligned_cols=139 Identities=22% Similarity=0.231 Sum_probs=127.0
Q ss_pred ccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccC
Q 008204 238 ESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKD 313 (574)
Q Consensus 238 ~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d 313 (574)
+.|++++..+..+..|.||||+|+..|+.++|++|++.| + .|..|+||||+|+..|+.+++++||+.| +++|.+|
T Consensus 6 ~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~n~~d 84 (229)
T 2vge_A 6 RKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAG-ANVNSPD 84 (229)
T ss_dssp ----CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCC
T ss_pred ccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCC
Confidence 448888888877779999999999999999999999998 4 4678999999999999999999999998 9999999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHH--HHcCChhhHHHHHhcCCCccc
Q 008204 314 ARGRTVLHVAARRKEPEVMVVLLSKGACSSETT-PDGQTAVAIC--RRMTRRKDYIEATKQGQETNK 377 (574)
Q Consensus 314 ~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d-~~G~TpL~~A--~~~g~~~~v~~l~~~G~~~~~ 377 (574)
..|+||||+|+..|+.+++++|+++|++++.++ .+|+||||+| +..|+.+++++|++.|++++.
T Consensus 85 ~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~ 151 (229)
T 2vge_A 85 SHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGL 151 (229)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccc
Confidence 999999999999999999999999999999997 6999999999 999999999999999876653
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=9.5e-24 Score=193.49 Aligned_cols=138 Identities=17% Similarity=0.107 Sum_probs=108.6
Q ss_pred ccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHH
Q 008204 180 VEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHK 259 (574)
Q Consensus 180 ~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~ 259 (574)
.+.|.||||+|+..|+.+++++.++. |++++..|. .|+||||+
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~----------------------------------g~~~~~~~~---~g~t~L~~ 51 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEA----------------------------------GANPNAPNS---YGRRPIQV 51 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTT----------------------------------TCCTTCCCS---SSCCTTTS
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHc----------------------------------CCCCCCCCC---CCCCHHHH
Confidence 45588999999998887776665542 778888887 99999999
Q ss_pred HHHcCCHHHHHHHHhCC-C---CCCCCcc-HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 008204 260 ALDSDDFELLNLLLNEY-K---VTLDDAC-ALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVV 334 (574)
Q Consensus 260 A~~~g~~~~v~~Ll~~g-~---~d~~g~t-pLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~ 334 (574)
|+ .|+.+++++|++.| + .|..|+| |||+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++
T Consensus 52 A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~v~~ 129 (156)
T 1bi7_B 52 MM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAG-ARLDVRDAWGRLPVDLAEELGHRDVARY 129 (156)
T ss_dssp SC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHT-CCSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHhCHHHHHHH
Confidence 95 99999999999999 4 4678998 999999999999999999998 9999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCcHHHHH
Q 008204 335 LLSKGACSSETTPDGQTAVAIC 356 (574)
Q Consensus 335 LL~~GAdvn~~d~~G~TpL~~A 356 (574)
|+++|++++.+|..|.||.+-+
T Consensus 130 Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 130 LRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HSSCC-----------------
T ss_pred HHHcCCCCCccCcCcCcccccC
Confidence 9999999999999999998754
No 84
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.89 E-value=1.3e-22 Score=185.11 Aligned_cols=148 Identities=17% Similarity=0.114 Sum_probs=130.0
Q ss_pred HHHHHHHHHcCchhhHhhhccc-CcccchhccccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHH
Q 008204 149 IESIYASAAFKMTEVVSVYEGW-LLKVVREALVEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSE 227 (574)
Q Consensus 149 ~elL~~A~~~~~~elv~~Ll~~-gadvn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~ 227 (574)
.++|+.|+..|..+++++|++. +.+++.. +..|.||||+ +..|+.++++..++
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~-~~~~~~~~v~~Ll~----------------------- 56 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDAL--NRFGKTALQV-MMFGSTAIALELLK----------------------- 56 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCC--CTTSCCHHHH-SCTTCHHHHHHHHH-----------------------
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCcccc--CCCCCcHHHH-HHcCCHHHHHHHHH-----------------------
Confidence 5789999999999999999988 3367665 5569999999 77777665554433
Q ss_pred HHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHH
Q 008204 228 IKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHN 303 (574)
Q Consensus 228 i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~ 303 (574)
.|++++..|. .|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++
T Consensus 57 -----------~g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 122 (156)
T 1bd8_A 57 -----------QGASPNVQDT---SGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA 122 (156)
T ss_dssp -----------TTCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred -----------CCCCCCCcCC---CCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHh
Confidence 2888888887 9999999999999999999999999 3 46789999999999999999999998
Q ss_pred cCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhC
Q 008204 304 MGLADINLKDARGRTVLHVAARRKEPEVMVVLLSK 338 (574)
Q Consensus 304 ~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~ 338 (574)
. ++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 123 ~--~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 123 E--SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp T--SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred c--cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 8 89999999999999999999999999999975
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=5e-24 Score=202.11 Aligned_cols=120 Identities=13% Similarity=0.032 Sum_probs=110.1
Q ss_pred CCchHHHHHHHcCCH----HHHHHHHhCC-C---CCCCCccHHHHHHHcCC------HHHHHHHHHcCCCCccccCCCCC
Q 008204 252 KRVRRIHKALDSDDF----ELLNLLLNEY-K---VTLDDACALHYAAAYCN------PKVFKEVHNMGLADINLKDARGR 317 (574)
Q Consensus 252 ~g~tpLh~A~~~g~~----~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~------~~~v~~LL~~g~advn~~d~~G~ 317 (574)
.|+||||+|+..|+. +++++|++.| + .|..|+||||+|+..|+ .+++++||++| +|+|.+|..|+
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~G-adin~~d~~g~ 115 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKG-ADITALYKPYK 115 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTT-CCSSSCBGGGT
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCC-CCCCccCCCcC
Confidence 799999999999975 5999999999 4 46789999999999987 68899999998 99999999999
Q ss_pred -hHHHHHHHcC-----CHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcC
Q 008204 318 -TVLHVAARRK-----EPEVMVVLLS-KGACSSETTPDGQTAVAICRRMTRRKDYIEATKQG 372 (574)
Q Consensus 318 -TpLh~Aa~~g-----~~~~v~~LL~-~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G 372 (574)
||||+|+..+ +.+++++|++ +|+|++.+|..|+||||+|+..|+..++++|.+..
T Consensus 116 ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 116 IVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp BCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred chHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 9999999954 4569999999 99999999999999999999999999999998764
No 86
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=5.2e-23 Score=184.10 Aligned_cols=129 Identities=16% Similarity=0.062 Sum_probs=112.8
Q ss_pred cccchhccccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCC
Q 008204 172 LKVVREALVEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHE 251 (574)
Q Consensus 172 advn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~ 251 (574)
++++.+ +..|.||||+|+..|+.+++++.++. |++++..|.
T Consensus 3 ~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~----------------------------------g~~~~~~~~--- 43 (136)
T 1d9s_A 3 PGIHML--GGSSDAGLATAAARGQVETVRQLLEA----------------------------------GADPNALNR--- 43 (136)
T ss_dssp CCCSCC--CCCCSCHHHHHHHTTCHHHHHHHHHT----------------------------------TCCTTCCCT---
T ss_pred CCccCC--CCCCccHHHHHHHcCCHHHHHHHHHc----------------------------------CCCcCCcCC---
Confidence 455555 44588888888888877666655442 778888887
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCC-C---CCCC-CccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHc
Q 008204 252 KRVRRIHKALDSDDFELLNLLLNEY-K---VTLD-DACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARR 326 (574)
Q Consensus 252 ~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~-g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~ 326 (574)
.|+||||+|+. |+.+++++|+++| + .|.. |+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..
T Consensus 44 ~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~ 121 (136)
T 1d9s_A 44 FGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAG-ARLDVCDAWGRLPVDLAEEQ 121 (136)
T ss_dssp TCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTC-CCCCCCSSSSSCHHHHHHHH
T ss_pred CCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHc
Confidence 99999999999 9999999999999 4 3567 999999999999999999999998 99999999999999999999
Q ss_pred CCHHHHHHHHhCCCC
Q 008204 327 KEPEVMVVLLSKGAC 341 (574)
Q Consensus 327 g~~~~v~~LL~~GAd 341 (574)
|+.+++++|+++|||
T Consensus 122 ~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 122 GHRDIARYLHAATGD 136 (136)
T ss_dssp TCHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999999986
No 87
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=3.8e-22 Score=175.06 Aligned_cols=106 Identities=26% Similarity=0.245 Sum_probs=100.3
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHc
Q 008204 251 EKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARR 326 (574)
Q Consensus 251 ~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~ 326 (574)
..|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG-ADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHc
Confidence 37899999999999999999999999 3 4678999999999999999999999998 99999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 008204 327 KEPEVMVVLLSKGACSSETTPDGQTAVAICR 357 (574)
Q Consensus 327 g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~ 357 (574)
|+.+++++|+++|++++.+|.+|+||||+|.
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence 9999999999999999999999999999994
No 88
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.87 E-value=9.5e-24 Score=221.90 Aligned_cols=174 Identities=13% Similarity=0.022 Sum_probs=131.6
Q ss_pred HHHHHHH-cCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHH
Q 008204 151 SIYASAA-FKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIK 229 (574)
Q Consensus 151 lL~~A~~-~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~ 229 (574)
.+++|.. ++.+++++++.++|.+ +.||||+|+..|+.+++++.++....
T Consensus 68 ~~~~a~~~~~~~~~~~~l~~~g~~---------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~--------------------- 117 (376)
T 2aja_A 68 CLYYAHYNRNAKQLWSDAHKKGIK---------SEVICFVAAITGCSSALDTLCLLLTS--------------------- 117 (376)
T ss_dssp HHHHHHTTTTCTTHHHHHHHHTCC---------HHHHHHHHHHHCCHHHHHHHTTC--C---------------------
T ss_pred HHHHHHhcCCCHHHHHHHHHcCCC---------cCCHHHHHHHcCCHHHHHHHHHcCCc---------------------
Confidence 4555555 6788888888877654 34899999999998877777654210
Q ss_pred HHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C-----CCCCCccHHHHHHHcCCHHHHHHHHH
Q 008204 230 SLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K-----VTLDDACALHYAAAYCNPKVFKEVHN 303 (574)
Q Consensus 230 ~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~-----~d~~g~tpLh~Aa~~g~~~~v~~LL~ 303 (574)
....+..+ ..|.||||+|+..|+.++|++|+++| + ++..++||||+|+..|+.++|++|++
T Consensus 118 ----------~~~~~~~~---~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~ 184 (376)
T 2aja_A 118 ----------DEIVKVIQ---AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCE 184 (376)
T ss_dssp ----------CSSCC--C---HHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ----------HHHHHHhc---cCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 00111222 36778999999999999999999888 3 23334889999999999999998888
Q ss_pred cCCCCccc--cCCCCChHHHHHH-HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCc
Q 008204 304 MGLADINL--KDARGRTVLHVAA-RRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQET 375 (574)
Q Consensus 304 ~g~advn~--~d~~G~TpLh~Aa-~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~ 375 (574)
+| ++++. .|..|+||||+|+ .+|+.++|++|+++|++ |.||||+|+..|+.+++++|.+.|++.
T Consensus 185 ~g-a~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 185 LA-PTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEKYVNPFIARHVNRL 251 (376)
T ss_dssp SC-GGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTTTTHHHHHHHHHHHH
T ss_pred cC-CccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCCHHHHHHHHhcCccc
Confidence 87 88887 7888889999998 88999999999887753 788999998888888888888877544
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.86 E-value=2.1e-21 Score=169.58 Aligned_cols=122 Identities=30% Similarity=0.354 Sum_probs=110.5
Q ss_pred CCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHH
Q 008204 182 DVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKAL 261 (574)
Q Consensus 182 ~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~ 261 (574)
+|.||||+|+..|+.+++++.++. |++++..+. .|.||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~----------------------------------~~~~~~~~~---~g~t~L~~A~ 43 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA----------------------------------GADVNAKDK---NGRTPLHLAA 43 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH----------------------------------TCCTTCCCT---TSCCHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc----------------------------------CCCCCCcCC---CCCcHHHHHH
Confidence 488999999998887776665442 667877777 9999999999
Q ss_pred HcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 008204 262 DSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLS 337 (574)
Q Consensus 262 ~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~ 337 (574)
..|+.+++++|++.| + .|..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|++
T Consensus 44 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 44 RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 999999999999999 3 4678999999999999999999999998 9999999999999999999999999999999
Q ss_pred CCCC
Q 008204 338 KGAC 341 (574)
Q Consensus 338 ~GAd 341 (574)
+|||
T Consensus 123 ~Gad 126 (126)
T 1n0r_A 123 AGAY 126 (126)
T ss_dssp HTCC
T ss_pred cCCC
Confidence 9986
No 90
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=1.5e-22 Score=196.26 Aligned_cols=125 Identities=16% Similarity=0.182 Sum_probs=110.6
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcC
Q 008204 252 KRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRK 327 (574)
Q Consensus 252 ~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g 327 (574)
.|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.++|++||+.+++++|.+|..|+||||+|+..|
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKG 151 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcC
Confidence 8999999999999999999999999 3 46889999999999999999999999944999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 008204 328 EPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETN 376 (574)
Q Consensus 328 ~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 376 (574)
+.+++++|+++|++++.+|.+|+||||+|+..++.++++.+.+.|+...
T Consensus 152 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 152 YADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp CHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred CHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 9999999999999999999999999999999999999999999988664
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=1.8e-22 Score=190.07 Aligned_cols=109 Identities=28% Similarity=0.332 Sum_probs=103.3
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCChHHHHHHHc
Q 008204 252 KRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKD-ARGRTVLHVAARR 326 (574)
Q Consensus 252 ~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d-~~G~TpLh~Aa~~ 326 (574)
.|.||||+|+..|+.+++++|++ | + .|..|+||||+|+..|+.+++++|++.| +++|.+| ..|+||||+|+..
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHHHhc
Confidence 89999999999999999999999 6 3 4688999999999999999999999998 9999998 8899999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCh
Q 008204 327 KEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRR 362 (574)
Q Consensus 327 g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~ 362 (574)
|+.+++++|+++|++++.+|.+|+||||+|+..++.
T Consensus 121 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 121 VRPEVVEALVELGADIEVEDERGLTALELAREILKT 156 (183)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT
T ss_pred CcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC
Confidence 999999999999999999999999999999986544
No 92
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.86 E-value=2.5e-22 Score=190.35 Aligned_cols=159 Identities=14% Similarity=0.079 Sum_probs=125.8
Q ss_pred HHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHH
Q 008204 151 SIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKS 230 (574)
Q Consensus 151 lL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~ 230 (574)
.|+.|+..|..+.+..+...+.+... +..|.||||+|+..|+.+- ..++++
T Consensus 9 ~l~~Aa~~g~~~~~~~l~~~~~~~~~---~~~g~T~Lh~A~~~~~~~~--------------------------~~~iv~ 59 (186)
T 3t8k_A 9 TVSAAAMLGTYEDFLELFEKGYEDKE---SVLKSNILYDVLRNNNDEA--------------------------RYKISM 59 (186)
T ss_dssp SHHHHHHHSCHHHHHHHHHHSSSCHH---HHHTTTHHHHHTTCSCHHH--------------------------HHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCccccc---ccCCCCHHHHHHHcCCcch--------------------------HHHHHH
Confidence 46667777777777666666544322 2347777777776664320 245677
Q ss_pred HHhhcccccCCCcccCCCCCCCCchHHHHHHHcCC------HHHHHHHHhCC-CC---CCCCc-cHHHHHHHcC-----C
Q 008204 231 LRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDD------FELLNLLLNEY-KV---TLDDA-CALHYAAAYC-----N 294 (574)
Q Consensus 231 ~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~------~~~v~~Ll~~g-~~---d~~g~-tpLh~Aa~~g-----~ 294 (574)
+|++. |+++|..|. .|+||||+|+..|+ .+++++|+++| ++ |..|+ ||||+|+..+ +
T Consensus 60 ~Ll~~----Gadvn~~d~---~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~ 132 (186)
T 3t8k_A 60 FLINK----GADIKSRTK---EGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEM 132 (186)
T ss_dssp HHHHT----TCCSSCCCT---TCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHH
T ss_pred HHHHC----CCCCCCCCC---CCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhH
Confidence 77744 999999998 99999999999987 68999999999 44 56789 9999999954 4
Q ss_pred HHHHHHHHH-cCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q 008204 295 PKVFKEVHN-MGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETT 346 (574)
Q Consensus 295 ~~~v~~LL~-~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d 346 (574)
.+++++||+ +| +|+|.+|..|+||||+|+..|+.++|++|+++..+.+.++
T Consensus 133 ~~iv~~Ll~~~g-ad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 133 IPLYKLIFSQSG-LQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp HHHHHHHHTSTT-CCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHhcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 569999999 77 9999999999999999999999999999998876666655
No 93
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=3.8e-21 Score=171.85 Aligned_cols=120 Identities=18% Similarity=0.217 Sum_probs=108.3
Q ss_pred CCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHH
Q 008204 182 DVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKAL 261 (574)
Q Consensus 182 ~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~ 261 (574)
.+.||||+|+..|+.++++..++. |++++..|. .|+||||+|+
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~----------------------------------g~~~~~~~~---~g~t~L~~A~ 55 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMAN----------------------------------GADVNAKDE---YGLTPLYLAT 55 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHT----------------------------------TCCTTCCCT---TSCCHHHHHH
T ss_pred cccHHHHHHHHhCCHHHHHHHHHc----------------------------------CCCCCCcCC---CCCCHHHHHH
Confidence 377899999998888777665542 778888887 9999999999
Q ss_pred HcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 008204 262 DSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLS 337 (574)
Q Consensus 262 ~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~ 337 (574)
..|+.+++++|++.| + .|..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|++
T Consensus 56 ~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 56 AHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHG-ADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 999999999999999 4 4678999999999999999999999998 9999999999999999999999999999999
Q ss_pred CC
Q 008204 338 KG 339 (574)
Q Consensus 338 ~G 339 (574)
+|
T Consensus 135 ~G 136 (136)
T 2jab_A 135 LN 136 (136)
T ss_dssp C-
T ss_pred cC
Confidence 87
No 94
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=1.3e-20 Score=190.14 Aligned_cols=124 Identities=17% Similarity=0.193 Sum_probs=116.7
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCC-CC---------CCCCccHHHHHHHc---CCHHHHHHHHHcCCCCccccCCCCCh
Q 008204 252 KRVRRIHKALDSDDFELLNLLLNEY-KV---------TLDDACALHYAAAY---CNPKVFKEVHNMGLADINLKDARGRT 318 (574)
Q Consensus 252 ~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---------d~~g~tpLh~Aa~~---g~~~~v~~LL~~g~advn~~d~~G~T 318 (574)
...++|+.|+..|+.+.++.|+..| ++ +..|+||||+|+.. |+.+++++|+++| +++|.+|..|+|
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-a~in~~d~~g~T 207 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-GNLDKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-SCTTCCCTTCCC
T ss_pred hhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC-CCccccCCCCCC
Confidence 4568999999999999999999999 42 56799999999999 8999999999998 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 008204 319 VLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETN 376 (574)
Q Consensus 319 pLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 376 (574)
|||+|+..|+.+++++|+++||+++.+|.+|+||||+|+..|+.+++++|++.|+...
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999999999999999999999999999999987543
No 95
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.85 E-value=6.4e-21 Score=158.82 Aligned_cols=93 Identities=32% Similarity=0.385 Sum_probs=84.2
Q ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q 008204 281 DDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMT 360 (574)
Q Consensus 281 ~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g 360 (574)
+|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 4889999999999999999999988 999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHhcCCC
Q 008204 361 RRKDYIEATKQGQE 374 (574)
Q Consensus 361 ~~~~v~~l~~~G~~ 374 (574)
+.+++++|++.|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999998863
No 96
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=2.7e-21 Score=191.03 Aligned_cols=106 Identities=28% Similarity=0.338 Sum_probs=101.0
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCChHHHHHHHc
Q 008204 252 KRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKD-ARGRTVLHVAARR 326 (574)
Q Consensus 252 ~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d-~~G~TpLh~Aa~~ 326 (574)
.|.||||+|+..|+.+++++|++ | + .|..|+||||+|+..|+.++|++||++| +++|.+| ..|+||||+|+..
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHHHHc
Confidence 89999999999999999999999 6 3 4678999999999999999999999998 9999998 8899999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q 008204 327 KEPEVMVVLLSKGACSSETTPDGQTAVAICRRM 359 (574)
Q Consensus 327 g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~ 359 (574)
|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 122 g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~ 154 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEVEDERGLTALELAREI 154 (244)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHH
Confidence 999999999999999999999999999999964
No 97
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.84 E-value=2.9e-21 Score=181.80 Aligned_cols=135 Identities=21% Similarity=0.205 Sum_probs=118.0
Q ss_pred cCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHH
Q 008204 181 EDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKA 260 (574)
Q Consensus 181 ~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A 260 (574)
.+|.||||+|+..|+.++++..++ |++++..|. .|+||||+|
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-----------------------------------~~~~~~~d~---~g~t~L~~A 83 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-----------------------------------DRDVDAVDE---NGRTALLFV 83 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-----------------------------------TSCTTCCCT---TSCCHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-----------------------------------cCCCCCcCC---CCCCHHHHH
Confidence 358899999999888776665443 556777777 999999999
Q ss_pred HHcCCHHHHHHHHhCC-CC---C-CCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 008204 261 LDSDDFELLNLLLNEY-KV---T-LDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVL 335 (574)
Q Consensus 261 ~~~g~~~~v~~Ll~~g-~~---d-~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~L 335 (574)
+..|+.+++++|++.| ++ + ..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++.
T Consensus 84 ~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~------ 156 (183)
T 3deo_A 84 AGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELG-ADIEVEDERGLTALELAREILKT------ 156 (183)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHHHHT------
T ss_pred HHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcC-CCCcCCCCCCCCHHHHHHHhccC------
Confidence 9999999999999999 44 4 77999999999999999999999998 99999999999999999986533
Q ss_pred HhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhc
Q 008204 336 LSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQ 371 (574)
Q Consensus 336 L~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~ 371 (574)
..+.+||++|+..|+.+++++|.++
T Consensus 157 -----------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 157 -----------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp -----------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred -----------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 4578999999999999999998765
No 98
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.83 E-value=5.2e-23 Score=216.27 Aligned_cols=205 Identities=8% Similarity=-0.043 Sum_probs=156.8
Q ss_pred HHHHHHHHHHcCchhhHhhhcccCcccchh-ccccCCchHHHHHHHcCCHhHHhhhhcccc------ccccccccccccC
Q 008204 148 VIESIYASAAFKMTEVVSVYEGWLLKVVRE-ALVEDVIPILVAALQCQLYPLCSFCIQRIA------RSNIDNVCLEKEL 220 (574)
Q Consensus 148 ~~elL~~A~~~~~~elv~~Ll~~gadvn~~-~~~~~g~t~L~~A~~~g~~~Ll~~ga~~~~------~~~~~~t~l~~a~ 220 (574)
..++||.|+..|..+++++|+++|+..... ..+..|.||||+|+..|+.++++++++..+ ....+.||||.|+
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa 171 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAA 171 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHH
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHHHH
Confidence 358999999999999999999999822110 112237899999999999774444433321 1122389999999
Q ss_pred cchhhHHHHHHHhhcccccCCCccc--CCCCCCCCchHHHHHH-HcCCHHHHHHHHhCCCCCCCCccHHHHHHHcCCHHH
Q 008204 221 PDEVSSEIKSLRVKSNQESEANIKE--VDPMHEKRVRRIHKAL-DSDDFELLNLLLNEYKVTLDDACALHYAAAYCNPKV 297 (574)
Q Consensus 221 ~~~~~~~i~~~L~~~~~~~ga~~n~--~d~~~~~g~tpLh~A~-~~g~~~~v~~Ll~~g~~d~~g~tpLh~Aa~~g~~~~ 297 (574)
..+ ..+++++|++. |++++. .|. .|.||||+|+ ..|+.++|++|++.|. .|.||||+|+.+|+.++
T Consensus 172 ~~G-~~eiv~~Ll~~----ga~~~~~~~d~---~g~TpL~~Aa~~~G~~eiv~~Ll~~ga---~~~taL~~Aa~~g~~ev 240 (376)
T 2aja_A 172 ENG-HLHVLNRLCEL----APTEATAMIQA---ENYYAFRWAAVGRGHHNVINFLLDCPV---MLAYAEIHEFEYGEKYV 240 (376)
T ss_dssp HTT-CHHHHHHHHHS----CGGGHHHHHHH---HHHHHHHHHHSTTCCHHHHHHHTTSHH---HHHHHHHCTTTTTTTTH
T ss_pred HCC-CHHHHHHHHHc----CCccchhccCC---CCCCHHHHHHHHCCCHHHHHHHHhCCC---ccchHHHHHHHCCCHHH
Confidence 888 88999999855 888887 777 8999999999 9999999999999872 48999999999999999
Q ss_pred HHHHHHcCCCCccccCCCCChHHHHHHHcCC---------------------------HHHHHHHHhC---------CCC
Q 008204 298 FKEVHNMGLADINLKDARGRTVLHVAARRKE---------------------------PEVMVVLLSK---------GAC 341 (574)
Q Consensus 298 v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~---------------------------~~~v~~LL~~---------GAd 341 (574)
+++|+++| ++++..+. ++++|+..|+ .+.+++|++. |++
T Consensus 241 v~lL~~~g-a~~~~~~~----~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~ 315 (376)
T 2aja_A 241 NPFIARHV-NRLKEMHD----AFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATI 315 (376)
T ss_dssp HHHHHHHH-HHHHHHHT----TTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSS
T ss_pred HHHHHhcC-cccccccH----HHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCC
Confidence 99999998 88876643 4444544444 3455555552 344
Q ss_pred CCCCCCCCCcHHHHHHHcCChhhHHHHHhcC
Q 008204 342 SSETTPDGQTAVAICRRMTRRKDYIEATKQG 372 (574)
Q Consensus 342 vn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G 372 (574)
+ ..+.||||+|+..|+.+++++|+..|
T Consensus 316 ~----n~~~~~L~~A~~~g~~e~v~lLl~~~ 342 (376)
T 2aja_A 316 P----GDANELLRLALRLGNQGACALLLSIP 342 (376)
T ss_dssp T----TCCCHHHHHHHHHTCTTHHHHHTTSH
T ss_pred C----CCccHHHHHHHHcCcHHHHHHHHcCh
Confidence 4 35679999999999999999999865
No 99
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=2.9e-20 Score=202.80 Aligned_cols=125 Identities=20% Similarity=0.223 Sum_probs=114.8
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCC-CC---------CCCCccHHHHHHH---cCCHHHHHHHHHcCCCCccccCCCCCh
Q 008204 252 KRVRRIHKALDSDDFELLNLLLNEY-KV---------TLDDACALHYAAA---YCNPKVFKEVHNMGLADINLKDARGRT 318 (574)
Q Consensus 252 ~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---------d~~g~tpLh~Aa~---~g~~~~v~~LL~~g~advn~~d~~G~T 318 (574)
...+.||.|+..|+.++|+.|++.| ++ |..|+||||+|+. .|+.++|++||++| +|+|.+|..|+|
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g-a~vn~~d~~g~T 209 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNT 209 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS-CCTTCCCSSSCC
T ss_pred ccHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC-CCCCccCCCCCc
Confidence 3447899999999999999999999 43 5679999999976 99999999999999 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCCccc
Q 008204 319 VLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQETNK 377 (574)
Q Consensus 319 pLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~ 377 (574)
|||+|+..|+.++|++||++|||++.+|.+|+||||+|+..|+.+++++|++.|++++.
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999998874
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=1.2e-20 Score=192.59 Aligned_cols=136 Identities=17% Similarity=0.155 Sum_probs=110.9
Q ss_pred CchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCccc------CCCCCCCCchH
Q 008204 183 VIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKE------VDPMHEKRVRR 256 (574)
Q Consensus 183 g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~------~d~~~~~g~tp 256 (574)
..++|+.|+..|..+.+...+.. |++++. .+. .|.||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~----------------------------------g~d~~~~~~~~~~~~---~g~t~ 193 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFAN----------------------------------GQDFGQPLPGPDAQA---PEELV 193 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHT----------------------------------TCCTTSCEECSSSCS---CEECH
T ss_pred hHHHHhhhhhccCHHHHHHHHhc----------------------------------CCcccccCCCcccCC---CCccH
Confidence 45789999988886654443321 445554 344 99999
Q ss_pred HHHHHHc---CCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCH
Q 008204 257 IHKALDS---DDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEP 329 (574)
Q Consensus 257 Lh~A~~~---g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~ 329 (574)
||+|+.. |+.+++++|++.| + .|..|+||||+|+..|+.+++++||+.| +|++.+|..|+||||+|+..|+.
T Consensus 194 Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~~~~ 272 (301)
T 2b0o_E 194 LHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIARKKHHK 272 (301)
T ss_dssp HHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCCSCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCH
Confidence 9999997 8999999999999 4 4678999999999999999999999998 99999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCh
Q 008204 330 EVMVVLLSKGACSSETTPDGQTAVAICRRMTRR 362 (574)
Q Consensus 330 ~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~ 362 (574)
+++++|+++|++ .|.||||+|+..|+.
T Consensus 273 ~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 273 ECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 999999999987 589999999998864
No 101
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=2.5e-19 Score=182.76 Aligned_cols=121 Identities=20% Similarity=0.237 Sum_probs=113.9
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCC-CC---------CCCCccHHHHHHHc---CCHHHHHHHHHcCCCCccccCCCCCh
Q 008204 252 KRVRRIHKALDSDDFELLNLLLNEY-KV---------TLDDACALHYAAAY---CNPKVFKEVHNMGLADINLKDARGRT 318 (574)
Q Consensus 252 ~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---------d~~g~tpLh~Aa~~---g~~~~v~~LL~~g~advn~~d~~G~T 318 (574)
.+.++||.|+..|+.+.++.|+..| ++ +..|+||||+|+.. |+.+++++||+.| +++|.+|..|+|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g-advn~~d~~G~T 228 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNT 228 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS-SCTTCCCTTCCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC-CCCCCCCCCCCC
Confidence 4568899999999999999999999 43 56899999999997 8999999999998 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCC
Q 008204 319 VLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQ 373 (574)
Q Consensus 319 pLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~ 373 (574)
|||+|+..|+.+++++||++||+++.+|.+|+||||+|+..|+.+++++|++.|+
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga 283 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQA 283 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999998775
No 102
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.82 E-value=7.3e-21 Score=169.98 Aligned_cols=124 Identities=15% Similarity=0.145 Sum_probs=104.8
Q ss_pred ccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHH
Q 008204 180 VEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHK 259 (574)
Q Consensus 180 ~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~ 259 (574)
+.+|.||||+|+..|+.+++++.++. |++++..|. .|+||||+
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~----------------------------------g~~~~~~~~---~g~t~L~~ 49 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQN----------------------------------GSDPNVKDH---AGWTPLHE 49 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHT----------------------------------TCCSCCCCT---TSCCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc----------------------------------CCCCCcCCC---CCCCHHHH
Confidence 55688999998888877666554432 778888887 99999999
Q ss_pred HHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 008204 260 ALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVL 335 (574)
Q Consensus 260 A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~L 335 (574)
|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..+..+++++|
T Consensus 50 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~l~~l 128 (137)
T 3c5r_A 50 ACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYG-ASRNAVNIFGLRPVDYTDDESMKSLLLLP 128 (137)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGCCCHHHHHHHSCC
T ss_pred HHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHhhccHHHHHhhc
Confidence 99999999999999999 3 4577999999999999999999999998 99999999999999999999999999888
Q ss_pred HhCCCC
Q 008204 336 LSKGAC 341 (574)
Q Consensus 336 L~~GAd 341 (574)
.+.+..
T Consensus 129 ~~~~~s 134 (137)
T 3c5r_A 129 EKNESS 134 (137)
T ss_dssp ------
T ss_pred cccccC
Confidence 876543
No 103
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=7.6e-20 Score=152.28 Aligned_cols=89 Identities=36% Similarity=0.452 Sum_probs=83.8
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcC
Q 008204 252 KRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRK 327 (574)
Q Consensus 252 ~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g 327 (574)
+|+||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcC
Confidence 4899999999999999999999999 4 4678999999999999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHhCCCC
Q 008204 328 EPEVMVVLLSKGAC 341 (574)
Q Consensus 328 ~~~~v~~LL~~GAd 341 (574)
+.+++++|+++||+
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999986
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=6.4e-20 Score=192.09 Aligned_cols=121 Identities=18% Similarity=0.154 Sum_probs=115.4
Q ss_pred CCchHHHHHHHc-CCHHHHHHHHhCC-CC---C--CCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHH
Q 008204 252 KRVRRIHKALDS-DDFELLNLLLNEY-KV---T--LDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAA 324 (574)
Q Consensus 252 ~g~tpLh~A~~~-g~~~~v~~Ll~~g-~~---d--~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa 324 (574)
.+.|+||+|+.. |+.+++++|+++| ++ + ..|+||||+|+..|+.++|++||++| +++|.+|..|+||||+|+
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G-advn~~d~~G~TpLh~A~ 276 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNG-ANVNQADSAGRGPLHHAT 276 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHH
Confidence 667999999999 9999999999999 44 3 67999999999999999999999998 999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCC
Q 008204 325 RRKEPEVMVVLLSKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQ 373 (574)
Q Consensus 325 ~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~ 373 (574)
..|+.+++++||++||+++.+|.+|+||||+|+..++.+++++|...|.
T Consensus 277 ~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 277 ILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999998774
No 105
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.81 E-value=1.6e-20 Score=181.99 Aligned_cols=133 Identities=13% Similarity=0.138 Sum_probs=104.7
Q ss_pred ccCCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHH
Q 008204 180 VEDVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHK 259 (574)
Q Consensus 180 ~~~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~ 259 (574)
+.+|.||||+|+..|+.++++..++. |++++..|. .|+||||+
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------------------g~~~~~~~~---~g~t~L~~ 112 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDN----------------------------------RVGVNGLDK---AGSTALYW 112 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHT----------------------------------TCCTTCCCT---TSCCHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhC----------------------------------CCCccccCC---CCCCHHHH
Confidence 34588999999999887776655442 778888887 99999999
Q ss_pred HHHcCCHHHHHHHHhC-C-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 008204 260 ALDSDDFELLNLLLNE-Y-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVV 334 (574)
Q Consensus 260 A~~~g~~~~v~~Ll~~-g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~ 334 (574)
|+..|+.++|++|++. | + .|..|+||||+|+..|+.+++++||+.| ++++.+|..|+||||+|+..|+.++++.
T Consensus 113 A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~l~~ 191 (222)
T 3ehr_A 113 ACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKG-ARTDLRNIEKKLAFDMATNAACASLLKK 191 (222)
T ss_dssp HHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHT-CCSCCCCTTSCCHHHHCCSHHHHHHHC-
T ss_pred HHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCccccCCCCCHHHHhcchhHHHHHHH
Confidence 9999999999999999 6 3 4688999999999999999999999998 9999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCC
Q 008204 335 LLSKGACSSETTPDGQ 350 (574)
Q Consensus 335 LL~~GAdvn~~d~~G~ 350 (574)
|++.|++.+..+..|+
T Consensus 192 l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 192 KQGTDAVRTLSNAEDY 207 (222)
T ss_dssp ----------------
T ss_pred Hhccchhhhccchhhh
Confidence 9999999988776543
No 106
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.81 E-value=2.5e-20 Score=161.27 Aligned_cols=103 Identities=23% Similarity=0.269 Sum_probs=92.6
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHH
Q 008204 250 HEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAAR 325 (574)
Q Consensus 250 ~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~ 325 (574)
|.+|+||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+.
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG-ADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT-CCTTCCCTTCCCTTHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCCHHHHHHH
Confidence 349999999999999999999999998 3 4678999999999999999999999998 9999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHH
Q 008204 326 RKEPEVMVVLLSKGACSSETTPDGQTAV 353 (574)
Q Consensus 326 ~g~~~~v~~LL~~GAdvn~~d~~G~TpL 353 (574)
.|+.+++++|+++||++|.++..|.||-
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 9999999999999999999999999874
No 107
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.78 E-value=1e-18 Score=153.02 Aligned_cols=98 Identities=19% Similarity=0.115 Sum_probs=91.8
Q ss_pred CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 008204 278 VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICR 357 (574)
Q Consensus 278 ~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~ 357 (574)
.+..|.||||+|+..|+.++++.|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKG-EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTT-CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcC-CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 4567899999999999999999999998 999999999999999999999999999999999999999999999999999
Q ss_pred HcCChhhHHHHHhcCCCcc
Q 008204 358 RMTRRKDYIEATKQGQETN 376 (574)
Q Consensus 358 ~~g~~~~v~~l~~~G~~~~ 376 (574)
..|+.+++++|++.|+++.
T Consensus 82 ~~~~~~~v~~Ll~~ga~~~ 100 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADKT 100 (123)
T ss_dssp HHTCHHHHHHHHHTTCCTT
T ss_pred HcCCHHHHHHHHHcCCCCC
Confidence 9999999999999998765
No 108
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.77 E-value=3.4e-19 Score=175.83 Aligned_cols=137 Identities=22% Similarity=0.202 Sum_probs=119.6
Q ss_pred CCchHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHH
Q 008204 182 DVIPILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKAL 261 (574)
Q Consensus 182 ~g~t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~ 261 (574)
+|.||||+|+..|+.++++..++ |+++|..|. .|+||||+|+
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-----------------------------------~~~~~~~d~---~g~t~L~~A~ 85 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-----------------------------------DRDVDAVDE---NGRTALLFVA 85 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-----------------------------------TCCTTCBCT---TSCBHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-----------------------------------CCCCCCcCC---CCCCHHHHHH
Confidence 38889999988888776665543 567888887 9999999999
Q ss_pred HcCCHHHHHHHHhCC-CC---C-CCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHH
Q 008204 262 DSDDFELLNLLLNEY-KV---T-LDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLL 336 (574)
Q Consensus 262 ~~g~~~~v~~Ll~~g-~~---d-~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL 336 (574)
..|+.++|++|+++| ++ + ..|+||||+|+..|+.++|++||++| +++|.+|..|+||||+|+..++
T Consensus 86 ~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~~~-------- 156 (244)
T 3ui2_A 86 GLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELG-ADIEVEDERGLTALELAREILK-------- 156 (244)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHHT--------
T ss_pred HCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHHHh--------
Confidence 999999999999999 44 3 66999999999999999999999998 9999999999999999997432
Q ss_pred hCCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhcCCC
Q 008204 337 SKGACSSETTPDGQTAVAICRRMTRRKDYIEATKQGQE 374 (574)
Q Consensus 337 ~~GAdvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~ 374 (574)
+..|.||||+|+..|+.+++++|.+.+.+
T Consensus 157 ---------~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 157 ---------TTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp ---------TCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred ---------ccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 25689999999999999999999997554
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.77 E-value=1e-18 Score=190.52 Aligned_cols=133 Identities=17% Similarity=0.182 Sum_probs=103.7
Q ss_pred hHHHHHHHcCCHhHHhhhhccccccccccccccccCcchhhHHHHHHHhhcccccCCCcccC---CCCCCCCchHHHHHH
Q 008204 185 PILVAALQCQLYPLCSFCIQRIARSNIDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEV---DPMHEKRVRRIHKAL 261 (574)
Q Consensus 185 t~L~~A~~~g~~~Ll~~ga~~~~~~~~~~t~l~~a~~~~~~~~i~~~L~~~~~~~ga~~n~~---d~~~~~g~tpLh~A~ 261 (574)
+.||.|+..|+.+.++..++. |+++|.. ...+..|+||||+|+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~----------------------------------g~~~n~~~~~~~~~~~g~t~Lh~A~ 179 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFAN----------------------------------GQDFGQPLPGPDAQAPEELVLHLAV 179 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHT----------------------------------TCCSSSCBCCSSSCCSCBCHHHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhh----------------------------------cccccCCCCCcccccccchHHHHHH
Confidence 679999998887655444332 5555544 012349999999997
Q ss_pred H---cCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 008204 262 D---SDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVV 334 (574)
Q Consensus 262 ~---~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~ 334 (574)
. .|+.++|++|+++| + .|.+|+||||+|+..|+.++|++||++| ||+|.+|..|+||||+|+..|+.+++++
T Consensus 180 ~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~~~~ 258 (497)
T 3lvq_E 180 KVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIARKKHHKECEEL 258 (497)
T ss_dssp HTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTC-CCCSCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 6 89999999999999 4 4678999999999999999999999998 9999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCcHHHHHHH
Q 008204 335 LLSKGACSSETTPDGQTAVAICRR 358 (574)
Q Consensus 335 LL~~GAdvn~~d~~G~TpL~~A~~ 358 (574)
|+++||+++. ||+|.+..
T Consensus 259 Ll~~ga~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 259 LEQAQAGTFA------FPLHVDYS 276 (497)
T ss_dssp HHHTCC------------------
T ss_pred HHHhCCCCCC------Ccceeecc
Confidence 9999999987 46666554
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.77 E-value=4.8e-19 Score=153.13 Aligned_cols=99 Identities=27% Similarity=0.382 Sum_probs=95.6
Q ss_pred CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 008204 278 VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAICR 357 (574)
Q Consensus 278 ~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A~ 357 (574)
.|.+|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKG-ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTT-CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 5789999999999999999999999998 999999999999999999999999999999999999999999999999999
Q ss_pred HcCChhhHHHHHhcCCCccc
Q 008204 358 RMTRRKDYIEATKQGQETNK 377 (574)
Q Consensus 358 ~~g~~~~v~~l~~~G~~~~~ 377 (574)
..++.+++++|+++|++++.
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~ 103 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNA 103 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHH
T ss_pred HCCCHHHHHHHHHcCCCCCc
Confidence 99999999999999998763
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.76 E-value=1.3e-18 Score=182.28 Aligned_cols=142 Identities=16% Similarity=0.175 Sum_probs=104.4
Q ss_pred ccccccccCcc-hhhHHHHHHHhhcccccCCCcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHH
Q 008204 212 DNVCLEKELPD-EVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACAL 286 (574)
Q Consensus 212 ~~t~l~~a~~~-~~~~~i~~~L~~~~~~~ga~~n~~d~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpL 286 (574)
+.|+||.|+.. + ..++++.|++. |+++|..+ .+..|.||||+|+..|+.++|++|+++| + .|..|+|||
T Consensus 199 ~~t~L~~Aa~~~g-~~~~v~~LL~~----Gadvn~~~-~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL 272 (368)
T 3jue_A 199 PGALLFRASGHPP-SLPTMADALAH----GADVNWVN-GGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPL 272 (368)
T ss_dssp HHHHHHHHTSSSC-CHHHHHHHHHT----TCCTTCCC-TTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCcHHHHHHHccC-CHHHHHHHHHc----CCCCCccc-cccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 44566666655 4 55566666533 89999887 2239999999999999999999999999 4 467899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCC---CCCCCCCCCCCcHHHHHHHcC
Q 008204 287 HYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKG---ACSSETTPDGQTAVAICRRMT 360 (574)
Q Consensus 287 h~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~G---Advn~~d~~G~TpL~~A~~~g 360 (574)
|+|+..|+.+++++||++| ++++.+|..|+||||+|+..|+.+++++|+..| ++....+..+.|+++++....
T Consensus 273 h~A~~~g~~~~v~~LL~~G-ad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 273 HHATILGHTGLACLFLKRG-ADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred HHHHHcCcHHHHHHHHHCc-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 9999999999999999998 999999999999999999999999999999875 445566778899999887654
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.75 E-value=3.7e-18 Score=146.86 Aligned_cols=91 Identities=29% Similarity=0.214 Sum_probs=81.1
Q ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 008204 277 KVTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAARRKEPEVMVVLLSKGACSSETTPDGQTAVAIC 356 (574)
Q Consensus 277 ~~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdvn~~d~~G~TpL~~A 356 (574)
.+|.+|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANG-ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 35788899999999999999999999987 99999999999999999999999999999999999999999999999999
Q ss_pred HHcCChhhHHHH
Q 008204 357 RRMTRRKDYIEA 368 (574)
Q Consensus 357 ~~~g~~~~v~~l 368 (574)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 999999888765
No 113
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.73 E-value=7.6e-18 Score=169.75 Aligned_cols=102 Identities=23% Similarity=0.278 Sum_probs=91.3
Q ss_pred CCCcccC---CCCCCCCchHHHHHHHc---CCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCc
Q 008204 240 EANIKEV---DPMHEKRVRRIHKALDS---DDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADI 309 (574)
Q Consensus 240 ga~~n~~---d~~~~~g~tpLh~A~~~---g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~adv 309 (574)
|++++.. +..+..|+||||+|+.. |+.+++++|+++| + .|..|+||||+|+..|+.++|++||+.| +|+
T Consensus 153 g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-ad~ 231 (278)
T 1dcq_A 153 GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGK-ASI 231 (278)
T ss_dssp TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCT
T ss_pred hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCC
Confidence 7775432 22344899999999999 8999999999999 4 4678999999999999999999999998 999
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHhCCCCC
Q 008204 310 NLKDARGRTVLHVAARRKEPEVMVVLLSKGACS 342 (574)
Q Consensus 310 n~~d~~G~TpLh~Aa~~g~~~~v~~LL~~GAdv 342 (574)
|.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus 232 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 232 EIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999853
No 114
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.67 E-value=7e-17 Score=150.52 Aligned_cols=139 Identities=21% Similarity=0.290 Sum_probs=110.6
Q ss_pred hhhhhcCCC-CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHH
Q 008204 37 LRRQSSNPE-EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHY 115 (574)
Q Consensus 37 l~~l~~~l~-~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~y 115 (574)
++.|.+-+. +.||||+|+|+|++|+|||+||++||+||+.||.+++.+ .....+.+.++.+. +|..+|+|
T Consensus 22 ~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e---~~~~~i~l~~~~~~------~f~~~l~~ 92 (172)
T 3htm_A 22 ADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE---SKKNRVEINDVEPE------VFKEMMCF 92 (172)
T ss_dssp HHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCG---GGTTEEEECSSCHH------HHHHHHHH
T ss_pred HHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccc---cCCCeEEecCCCHH------HHHHHHHH
Confidence 344444344 899999999999999999999999999999999988742 23457777666555 99999999
Q ss_pred HHhCCcCCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCC
Q 008204 116 LYTGMRKAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQL 195 (574)
Q Consensus 116 lYtg~v~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~ 195 (574)
+|+|++.. .. ..+.++|.+|..+++..+.+.+.+....... .++....+.+|..++.
T Consensus 93 ~Yt~~~~~---------~~-----------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~---~~n~~~~~~~A~~~~~ 149 (172)
T 3htm_A 93 IYTGKAPN---------LD-----------KMADDLLAAADKYALERLKVMCEDALCSNLS---VENAAEILILADLHSA 149 (172)
T ss_dssp HHHSCCTT---------GG-----------GTHHHHHHHHHHTTCHHHHHHHHHHHHHTCC---TTTHHHHHHHHHHTTC
T ss_pred HhCCCCCC---------cH-----------HHHHHHHHHHHHhCcHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHhCc
Confidence 99998743 22 4578999999999999999888776554322 3557788999999999
Q ss_pred HhHHhhhhcccc
Q 008204 196 YPLCSFCIQRIA 207 (574)
Q Consensus 196 ~~Ll~~ga~~~~ 207 (574)
.+|.+.+.+...
T Consensus 150 ~~L~~~~~~~i~ 161 (172)
T 3htm_A 150 DQLKTQAVDFIN 161 (172)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999888877643
No 115
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.66 E-value=3e-16 Score=134.80 Aligned_cols=86 Identities=19% Similarity=0.277 Sum_probs=80.1
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHH
Q 008204 249 MHEKRVRRIHKALDSDDFELLNLLLNEY-K---VTLDDACALHYAAAYCNPKVFKEVHNMGLADINLKDARGRTVLHVAA 324 (574)
Q Consensus 249 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~Aa~~g~~~~v~~LL~~g~advn~~d~~G~TpLh~Aa 324 (574)
.+.+|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG-ADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccccCCCcHHHHHH
Confidence 3449999999999999999999999999 4 4678999999999999999999999998 999999999999999999
Q ss_pred HcCCHHHHHHH
Q 008204 325 RRKEPEVMVVL 335 (574)
Q Consensus 325 ~~g~~~~v~~L 335 (574)
..|+.+++++|
T Consensus 99 ~~~~~~~~~~L 109 (110)
T 2zgd_A 99 DNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 99999999987
No 116
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.65 E-value=2.3e-16 Score=156.91 Aligned_cols=141 Identities=21% Similarity=0.307 Sum_probs=106.9
Q ss_pred hhhhhhcCCC-CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHH
Q 008204 36 NLRRQSSNPE-EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILH 114 (574)
Q Consensus 36 ~l~~l~~~l~-~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ 114 (574)
.++.|.+.+. +.||||+|+|+|++|+|||+|||++|+||++||.+++.. .+.....+.+.++.+. +|..+|+
T Consensus 18 l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~-~e~~~~~i~l~~v~~~------~f~~ll~ 90 (256)
T 3hve_A 18 LLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPK-DDGSTYKIELEGISVM------VMREILD 90 (256)
T ss_dssp HHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC------------CEEECSSCCHH------HHHHHHH
T ss_pred HHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCc-ccCCCCeEEeCCCCHH------HHHHHHh
Confidence 4666666666 999999999999999999999999999999999987631 1223456777765555 9999999
Q ss_pred HHHhCCcCCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcC
Q 008204 115 YLYTGMRKAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQ 194 (574)
Q Consensus 115 ylYtg~v~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g 194 (574)
|+|+|++... . +.+.+++.+|..+++..+.+.|.+...+... .+++...+.+|..++
T Consensus 91 ~~Yt~~~~i~---------~-----------~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~---~~n~~~i~~~A~~~~ 147 (256)
T 3hve_A 91 YIFSGQIRLN---------E-----------DTIQDVVQAADLLLLTDLKTLCCEFLEGCIA---AENCIGIRDFALHYC 147 (256)
T ss_dssp HHHHSCCCCC---------------------CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCC---SSTTHHHHHHHHHTT
T ss_pred hccCCCCccc---------H-----------hHHHHHHHHHHHHChHHHHHHHHHHHHhhCC---HhhHHHHHHHHHHcC
Confidence 9999988542 2 3578999999999999999988776654433 456888999999999
Q ss_pred CHhHHhhhhccc
Q 008204 195 LYPLCSFCIQRI 206 (574)
Q Consensus 195 ~~~Ll~~ga~~~ 206 (574)
..+|.+.+.+..
T Consensus 148 ~~~L~~~~~~~i 159 (256)
T 3hve_A 148 LHHVHYLATEYL 159 (256)
T ss_dssp CHHHHHHHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 999888877654
No 117
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.63 E-value=7.9e-17 Score=144.32 Aligned_cols=105 Identities=18% Similarity=0.289 Sum_probs=82.4
Q ss_pred hhhhhcCCC-CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHH
Q 008204 37 LRRQSSNPE-EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHY 115 (574)
Q Consensus 37 l~~l~~~l~-~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~y 115 (574)
++.|.+.+. +.||||+|+|+|++|+|||+||||||+||++||.+++ ..++.+.++.+. +|..+|+|
T Consensus 13 ~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~-------~~~i~l~~~~~~------~f~~lL~f 79 (135)
T 2yy9_A 13 LQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT-------GGSVVLPAGFAE------IFGLLLDF 79 (135)
T ss_dssp HHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-----------CCEEECGGGHH------HHHHHHHH
T ss_pred HHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC-------CCeEEeCCCCHH------HHHHHHHH
Confidence 344443343 9999999999999999999999999999999999875 245777665544 99999999
Q ss_pred HHhCCcCCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhcccCccc
Q 008204 116 LYTGMRKAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGWLLKV 174 (574)
Q Consensus 116 lYtg~v~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~gadv 174 (574)
+|+|++... . +.+.++|.+|.++++..+++.|.+...+.
T Consensus 80 iYtg~~~i~---------~-----------~~v~~ll~~A~~l~i~~L~~~C~~~l~~~ 118 (135)
T 2yy9_A 80 FYTGHLALT---------S-----------GNRDQVLLAAKELRVPEAVELCQSFQPQT 118 (135)
T ss_dssp HHHSCCCCC---------T-----------TTHHHHHHHHHHTTCHHHHHHHHHCCC--
T ss_pred HhCCCCCCC---------H-----------HHHHHHHHHHHHhCcHHHHHHHHHHHHHh
Confidence 999987542 2 45889999999999999999988776543
No 118
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.63 E-value=4.1e-16 Score=141.20 Aligned_cols=107 Identities=21% Similarity=0.373 Sum_probs=84.5
Q ss_pred hhhhhcCCC-CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHH
Q 008204 37 LRRQSSNPE-EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHY 115 (574)
Q Consensus 37 l~~l~~~l~-~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~y 115 (574)
++.|.+.+. +.||||+|+|+|+.|+|||+||||||+||++||.+++.+ .+.....+.+.++.+. +|..+|+|
T Consensus 35 ~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e-~e~~~~~I~l~~v~~~------~f~~lL~f 107 (144)
T 2ppi_A 35 LRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPK-DDGSTYKIELEGISVM------VMREILDY 107 (144)
T ss_dssp HHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC------CCCEEECCSSCHH------HHHHHHHH
T ss_pred HHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCcc-ccCCCcEEEeCCCCHH------HHHHHHHH
Confidence 445555555 999999999999999999999999999999999987632 1223456777765555 99999999
Q ss_pred HHhCCcCCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhccc
Q 008204 116 LYTGMRKAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGW 170 (574)
Q Consensus 116 lYtg~v~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~ 170 (574)
+|+|++.. +. +.+.++|.+|..+++..+.+.|.+.
T Consensus 108 iYtg~~~i---------~~-----------~~v~~ll~~A~~l~i~~L~~~C~~~ 142 (144)
T 2ppi_A 108 IFSGQIRL---------NE-----------DTIQDVVQAADLLLLTDLKTLCCEF 142 (144)
T ss_dssp HTTSCCCC---------CT-----------TTHHHHHHHHHHTTCHHHHHHHHTT
T ss_pred HhCCCCCC---------CH-----------HHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 99998854 22 4588999999999999999988765
No 119
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.63 E-value=1.2e-16 Score=144.51 Aligned_cols=130 Identities=22% Similarity=0.307 Sum_probs=85.0
Q ss_pred hhhhhcCCC-CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHH
Q 008204 37 LRRQSSNPE-EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHY 115 (574)
Q Consensus 37 l~~l~~~l~-~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~y 115 (574)
++.|.+.+. +.||||+|.|+|+.|+|||+||++||+||+.||.+++.+ .....+.+.++.+. +|..+|+|
T Consensus 13 ~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e---~~~~~i~l~~~~~~------~~~~~l~~ 83 (145)
T 4eoz_A 13 ADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE---SKKNRVEINDVEPE------VFKEMMCF 83 (145)
T ss_dssp HHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHH---HHHTEEEECSSCHH------HHHHHHHH
T ss_pred HHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcC---CCCceEEecCCCHH------HHHHHHHh
Confidence 344444344 899999999999999999999999999999999987631 12356677665555 99999999
Q ss_pred HHhCCcCCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCC
Q 008204 116 LYTGMRKAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQL 195 (574)
Q Consensus 116 lYtg~v~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~ 195 (574)
+|+|++.. .. +.+.+++.+|..+++..+.+.|.+....... .++....+.+|..++.
T Consensus 84 ~Y~~~~~~---------~~-----------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~---~~n~~~~l~~A~~~~~ 140 (145)
T 4eoz_A 84 IYTGKAPN---------LD-----------KMADDLLAAADKYALERLKVMCEDALCSNLS---VENAAEILILADLHSA 140 (145)
T ss_dssp HHHSCCTT---------GG-----------GTHHHHHHHHHHTTCHHHHHHHHCC-------------------------
T ss_pred hccCccCC---------cH-----------HHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHhCH
Confidence 99998743 12 4578999999999999999999888765443 4567888999998887
Q ss_pred HhH
Q 008204 196 YPL 198 (574)
Q Consensus 196 ~~L 198 (574)
.+|
T Consensus 141 ~~L 143 (145)
T 4eoz_A 141 DQL 143 (145)
T ss_dssp ---
T ss_pred HHh
Confidence 665
No 120
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.63 E-value=3.4e-16 Score=136.96 Aligned_cols=94 Identities=20% Similarity=0.284 Sum_probs=80.2
Q ss_pred CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHHHHhCCcCCCC
Q 008204 46 EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMRKAPP 125 (574)
Q Consensus 46 ~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v~~~p 125 (574)
+.||||+|+|+|++|+|||+||||||+||++||.+++ ...+.+.++.+. +|..+|+|+|+|++...
T Consensus 22 ~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~-------~~~i~l~~~~~~------~f~~ll~~iYtg~~~~~- 87 (119)
T 3b84_A 22 GQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS-------GGSVVLPAGFAE------IFGLLLDFFYTGHLALT- 87 (119)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT-------CCCEEECGGGHH------HHHHHHHHHHHSCCCCC-
T ss_pred CCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC-------CCeEEeCCCCHH------HHHHHHHHHcCCCCccC-
Confidence 9999999999999999999999999999999999875 246777655544 99999999999987542
Q ss_pred CCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhcccCc
Q 008204 126 SEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGWLL 172 (574)
Q Consensus 126 ~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~ga 172 (574)
. +.+.+++.+|..+++..+.+.|.+...
T Consensus 88 --------~-----------~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (119)
T 3b84_A 88 --------S-----------GNRDQVLLAARELRVPEAVELCQSFKP 115 (119)
T ss_dssp --------T-----------TTHHHHHHHHHHTTCHHHHHHHHHCC-
T ss_pred --------H-----------HHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 2 347899999999999999999877654
No 121
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.62 E-value=3.6e-16 Score=136.91 Aligned_cols=105 Identities=21% Similarity=0.305 Sum_probs=82.2
Q ss_pred hhhhhcCCC-CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHH
Q 008204 37 LRRQSSNPE-EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHY 115 (574)
Q Consensus 37 l~~l~~~l~-~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~y 115 (574)
++.|.+.+. +.||||+|.|+|++|+|||+|||+||+||++||.+++.+ .....+.+.++.+. +|..+|+|
T Consensus 13 ~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e---~~~~~i~l~~~~~~------~f~~ll~~ 83 (120)
T 2if5_A 13 LSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVV---DQQNVYEIDFVSAE------ALTALMDF 83 (120)
T ss_dssp HHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC--------CCSEEECCSSCHH------HHHHHHHH
T ss_pred HHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccc---cCCceEEeCCCCHH------HHHHHHHH
Confidence 333433333 999999999999999999999999999999999988732 24456777665555 99999999
Q ss_pred HHhCCcCCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhccc
Q 008204 116 LYTGMRKAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGW 170 (574)
Q Consensus 116 lYtg~v~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~ 170 (574)
+|+|++... . ..+.+++.+|..+++..+.+.|.+.
T Consensus 84 ~Yt~~~~~~---------~-----------~~~~~ll~~A~~~~i~~L~~~C~~~ 118 (120)
T 2if5_A 84 AYTATLTVS---------T-----------ANVGDILSAARLLEIPAVSHVCADL 118 (120)
T ss_dssp HHHSCCCCC---------G-----------GGHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HcCCCCccC---------H-----------HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999987541 2 4688999999999999999887653
No 122
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.62 E-value=1.4e-16 Score=140.58 Aligned_cols=104 Identities=17% Similarity=0.268 Sum_probs=82.9
Q ss_pred hhhhhcCCC-CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHH
Q 008204 37 LRRQSSNPE-EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHY 115 (574)
Q Consensus 37 l~~l~~~l~-~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~y 115 (574)
++.|.+.+. +.||||+|+|+|++|+|||+|||+||+||++||.+.+. +...+.+.+ .+.+++|..+|+|
T Consensus 20 ~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~-----e~~~i~l~~-----~~~~~~f~~~l~~ 89 (125)
T 3ohu_A 20 LLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTK-----NDLVVSLPE-----EVTARGFGPLLQF 89 (125)
T ss_dssp HHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCC-----SSCEEECCT-----TCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCC-----CCcEEEeCC-----CCCHHHHHHHHHh
Confidence 333433333 99999999999999999999999999999999998863 245666665 1444599999999
Q ss_pred HHhCCcCCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhccc
Q 008204 116 LYTGMRKAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGW 170 (574)
Q Consensus 116 lYtg~v~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~ 170 (574)
+|+|++.. +. +.+.+++.+|..+++..+++.|.+.
T Consensus 90 iYtg~~~~---------~~-----------~~v~~ll~~A~~l~i~~L~~~C~~~ 124 (125)
T 3ohu_A 90 AYTAKLLL---------SR-----------ENIREVIRCAEFLRMHNLEDSCFSF 124 (125)
T ss_dssp HTTSEEEE---------CT-----------TTHHHHHHHHHHHTBSSCTTSSCCC
T ss_pred HcCCceEE---------CH-----------HHHHHHHHHHHHhCCHHHHHHHHHh
Confidence 99998744 22 4578999999999999998887654
No 123
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.62 E-value=6.7e-16 Score=136.67 Aligned_cols=103 Identities=19% Similarity=0.298 Sum_probs=83.5
Q ss_pred hhhhcCCC-CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceec-ccccccccccHHHHHHHHHH
Q 008204 38 RRQSSNPE-EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLM-TDLVPYRKVGYEAFNDILHY 115 (574)
Q Consensus 38 ~~l~~~l~-~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l-~~l~~~~~vg~e~f~~lL~y 115 (574)
+.|.+.+. +.||||+|+|+|++|+|||+|||+||+||++||.+++.+ ....+.+ .++.+ ++|..+|+|
T Consensus 18 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e----~~~~i~l~~~~~~------~~f~~ll~~ 87 (127)
T 1r29_A 18 LNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR----NLSVINLDPEINP------EGFNILLDF 87 (127)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT----TCSEEECCTTSCH------HHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC----CCCEEEeCCCCCH------HHHHHHHHH
Confidence 33433333 999999999999999999999999999999999998742 3466777 55544 499999999
Q ss_pred HHhCCcCCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhccc
Q 008204 116 LYTGMRKAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGW 170 (574)
Q Consensus 116 lYtg~v~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~ 170 (574)
+|+|++... . ..+.+++.+|..+++..+.+.|.+.
T Consensus 88 ~Ytg~~~~~---------~-----------~~~~~ll~~A~~~~i~~L~~~c~~~ 122 (127)
T 1r29_A 88 MYTSRLNLR---------E-----------GNIMAVMATAMYLQMEHVVDTCRKF 122 (127)
T ss_dssp HHHSCCCCC---------T-----------TTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HcCCCcCcC---------H-----------HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999987542 2 4588999999999999999887654
No 124
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.62 E-value=8.4e-16 Score=138.12 Aligned_cols=107 Identities=19% Similarity=0.273 Sum_probs=84.8
Q ss_pred hhhhhcCCC-CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHH
Q 008204 37 LRRQSSNPE-EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHY 115 (574)
Q Consensus 37 l~~l~~~l~-~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~y 115 (574)
++.|.+.+. +.||||+|+|+|++|+|||+||||||+||++||.+.+. +...+.+. ..+.+++|..+|+|
T Consensus 24 ~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~-----e~~~i~l~-----~~v~~~~~~~lL~~ 93 (138)
T 2z8h_A 24 LLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTD-----AELTVTLP-----EEVTVKGFEPLIQF 93 (138)
T ss_dssp HHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCC-----TTEEEECC-----TTSCHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCC-----CCceEEeC-----CCCCHHHHHHHHHH
Confidence 334433344 99999999999999999999999999999999998873 22455553 13455699999999
Q ss_pred HHhCCcCCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhcccCcc
Q 008204 116 LYTGMRKAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGWLLK 173 (574)
Q Consensus 116 lYtg~v~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~gad 173 (574)
+|+|++... . +.+.++|.+|..+++..+++.|.+....
T Consensus 94 ~Ytg~~~i~---------~-----------~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 131 (138)
T 2z8h_A 94 AYTAKLILS---------K-----------DNVDEVCRCVEFLSVHNIEESCFQFLKF 131 (138)
T ss_dssp HHHSCCCCC---------T-----------TTHHHHHHHHHHHTCGGGHHHHHHHTTC
T ss_pred hcCCCcccC---------H-----------HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999987542 2 4588999999999999999988776544
No 125
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.61 E-value=2.3e-16 Score=137.47 Aligned_cols=97 Identities=21% Similarity=0.345 Sum_probs=78.6
Q ss_pred hhhhhhcCCC-CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHH
Q 008204 36 NLRRQSSNPE-EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILH 114 (574)
Q Consensus 36 ~l~~l~~~l~-~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ 114 (574)
.++.|.+.+. +.||||+|.|+|+.|+|||+|||+||+||++||.++. ..+.+.++.+. +|..+|+
T Consensus 18 l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~~--------~~i~l~~~~~~------~f~~~l~ 83 (116)
T 3fkc_A 18 LLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVAG--------QVVELSFIRAE------IFAEILN 83 (116)
T ss_dssp HHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSCC--------SEEEECSSCHH------HHHHHHH
T ss_pred HHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCCC--------CEEEeCCCCHH------HHHHHHH
Confidence 3444444444 9999999999999999999999999999999998863 46777666555 9999999
Q ss_pred HHHhCCcCCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHh
Q 008204 115 YLYTGMRKAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVS 165 (574)
Q Consensus 115 ylYtg~v~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~ 165 (574)
|+|+|++.. ... +.+.+++.+|..+++..+.+
T Consensus 84 ~~Ytg~~~~--------~~~-----------~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 84 YIYSSKIVR--------VRS-----------DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHTTSCCCS--------CCH-----------HHHHHHHHHHHHHTCHHHHT
T ss_pred hhcCCCcCC--------CCH-----------HHHHHHHHHHHHhCccccCc
Confidence 999998722 122 56789999999999988764
No 126
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.59 E-value=9.9e-16 Score=133.33 Aligned_cols=92 Identities=23% Similarity=0.339 Sum_probs=77.4
Q ss_pred CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecc--cccccccccHHHHHHHHHHHHhCCcCC
Q 008204 46 EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMT--DLVPYRKVGYEAFNDILHYLYTGMRKA 123 (574)
Q Consensus 46 ~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~--~l~~~~~vg~e~f~~lL~ylYtg~v~~ 123 (574)
+.||||+|+|+|++|+|||+|||+||+||++||.++. ...+.+. ++.+ ++|..+|+|+|+|++..
T Consensus 20 ~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~-------~~~i~l~~~~~~~------~~f~~ll~~~Yt~~~~~ 86 (116)
T 2vpk_A 20 GFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTS-------ENNVFLDQSQVKA------DGFQKLLEFIYTGTLNL 86 (116)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCC-------CSCEECCTTTCCH------HHHHHHHHHHHHSCCCC
T ss_pred CCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCCC-------CCeEEeecCCCCH------HHHHHHHHHHcCCCccc
Confidence 9999999999999999999999999999999998762 2345554 5544 49999999999998754
Q ss_pred CCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhccc
Q 008204 124 PPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGW 170 (574)
Q Consensus 124 ~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~ 170 (574)
. . ..+.+++.+|..+++..+++.|.+.
T Consensus 87 ~---------~-----------~~v~~ll~~A~~~~i~~L~~~C~~~ 113 (116)
T 2vpk_A 87 D---------S-----------WNVKEIHQAADYLKVEEVVTKCKIK 113 (116)
T ss_dssp C---------T-----------TTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred C---------H-----------HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 2 2 4588999999999999999887654
No 127
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.59 E-value=9e-16 Score=134.67 Aligned_cols=99 Identities=25% Similarity=0.393 Sum_probs=81.4
Q ss_pred hhhhcCCC-CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHHH
Q 008204 38 RRQSSNPE-EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHYL 116 (574)
Q Consensus 38 ~~l~~~l~-~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~yl 116 (574)
+.|.+.+. +.||||+|+|+|++|+|||+|||+||+||++||.++. .++.+.++.+. +|..+|+|+
T Consensus 17 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~--------~~i~l~~~~~~------~f~~ll~~~ 82 (121)
T 1buo_A 17 CKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRNS--------QHYTLDFLSPK------TFQQILEYA 82 (121)
T ss_dssp HHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSCC--------SEEEECSSCHH------HHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCCC--------cEEEeCCCCHH------HHHHHHHhh
Confidence 33433333 9999999999999999999999999999999998753 46777665554 999999999
Q ss_pred HhCCcCCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhccc
Q 008204 117 YTGMRKAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGW 170 (574)
Q Consensus 117 Ytg~v~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~ 170 (574)
|+|++... . +.+.+++.+|..+++..+.+.|.+.
T Consensus 83 Ytg~~~~~---------~-----------~~~~~ll~~A~~~~i~~L~~~c~~~ 116 (121)
T 1buo_A 83 YTATLQAK---------A-----------EDLDDLLYAAEILEIEYLEEQCLKM 116 (121)
T ss_dssp HHSCCCCC---------G-----------GGHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred cCCCcCCC---------H-----------HHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 99987542 2 4588999999999999999887654
No 128
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.59 E-value=1.6e-15 Score=130.32 Aligned_cols=95 Identities=20% Similarity=0.348 Sum_probs=76.7
Q ss_pred CCCCceEEEEcC----eEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHHHHhCCc
Q 008204 46 EPLLDAEIVVDG----KSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMR 121 (574)
Q Consensus 46 ~~~sDv~i~v~g----~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v 121 (574)
+.||||+|+|+| +.|+|||+|||+||+||++||.+++.+. . ..+.+.++.+. +|..+|+|+|+|++
T Consensus 6 ~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~---~-~~i~l~~~~~~------~f~~~l~~iYt~~~ 75 (109)
T 2vkp_A 6 ELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEV---K-SEIHIPDVEPA------AFLILLKYMYSDEI 75 (109)
T ss_dssp CTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC---------C-CEEEETTSCHH------HHHHHHHHHHHCCC
T ss_pred CCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccC---C-CeEEeCCCCHH------HHHHHHHHHcCCCc
Confidence 789999999998 8999999999999999999999887422 2 56777665555 99999999999987
Q ss_pred CCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhccc
Q 008204 122 KAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGW 170 (574)
Q Consensus 122 ~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~ 170 (574)
... . +.+.+++.+|..++...+.+.|.+.
T Consensus 76 ~~~---------~-----------~~~~~ll~~A~~~~~~~L~~~c~~~ 104 (109)
T 2vkp_A 76 DLE---------A-----------DTVLATLYAAKKYIVPALAKACVNF 104 (109)
T ss_dssp CCC---------T-----------TTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCC---------H-----------HHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 542 1 4578999999999999999887654
No 129
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.59 E-value=9.6e-16 Score=134.10 Aligned_cols=91 Identities=19% Similarity=0.328 Sum_probs=77.1
Q ss_pred CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHHHHhCCcCCCC
Q 008204 46 EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMRKAPP 125 (574)
Q Consensus 46 ~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v~~~p 125 (574)
+.||||+|+++|++|+|||+|||+||+||++||.+.. ..+.+.+ +.+++|..+|+|+|+|++...
T Consensus 25 ~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~--------~~i~l~~------~~~~~f~~ll~~~Ytg~~~i~- 89 (119)
T 2q81_A 25 GLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQK--------DVVHLDI------SNAAGLGQVLEFMYTAKLSLS- 89 (119)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC--------SGGGGGG------CCHHHHHHHHHHHHHSCCCCC-
T ss_pred CCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCCC--------CEEEeCC------CCHHHHHHHHHHHcCCCCccC-
Confidence 9999999999999999999999999999999999753 3455544 445599999999999988542
Q ss_pred CCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhccc
Q 008204 126 SEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGW 170 (574)
Q Consensus 126 ~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~ 170 (574)
. +.+.+++.+|..+++.++++.|.+.
T Consensus 90 --------~-----------~~~~~ll~~A~~l~i~~L~~~C~~~ 115 (119)
T 2q81_A 90 --------P-----------ENVDDVLAVATFLQMQDIITACHAL 115 (119)
T ss_dssp --------T-----------TTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred --------H-----------HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 2 3578999999999999999887654
No 130
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.59 E-value=6e-16 Score=136.45 Aligned_cols=105 Identities=21% Similarity=0.309 Sum_probs=81.9
Q ss_pred hhhhhcCCC-CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHH
Q 008204 37 LRRQSSNPE-EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHY 115 (574)
Q Consensus 37 l~~l~~~l~-~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~y 115 (574)
++.|.+.+. +.||||+|+|+|++|+|||+||||||+||++||.+++. +...+.+. ..+.+++|..+|+|
T Consensus 17 ~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~-----e~~~i~l~-----~~v~~~~f~~lL~~ 86 (124)
T 2ihc_A 17 LLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQAD-----GELNITLP-----EEVTVKGFEPLIQF 86 (124)
T ss_dssp HHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC--------CEEEECC-----TTSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCC-----CCceEeec-----CCcCHHHHHHHHHH
Confidence 444444444 99999999999999999999999999999999998873 22345552 13455699999999
Q ss_pred HHhCCcCCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhcccC
Q 008204 116 LYTGMRKAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGWL 171 (574)
Q Consensus 116 lYtg~v~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~g 171 (574)
+|+|++.. .. +.+.+++.+|..+++..+.+.|.+..
T Consensus 87 iYtg~~~i---------~~-----------~~v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 87 AYTAKLIL---------SK-----------ENVDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp HHHSEEEE---------ET-----------TTHHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred hcCCCccc---------CH-----------HHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 99998743 22 45889999999999999998887653
No 131
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.57 E-value=2.2e-15 Score=154.23 Aligned_cols=136 Identities=22% Similarity=0.304 Sum_probs=108.6
Q ss_pred hhcCCC-CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHHHHh
Q 008204 40 QSSNPE-EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYT 118 (574)
Q Consensus 40 l~~~l~-~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYt 118 (574)
|.+.+. +.||||+|.|+|++|+|||+||||||+||++||.+.+.+. ...++.+.++.+. +|..+|+|+|+
T Consensus 165 l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~---~~~~i~l~~~~~~------~f~~~L~~iYt 235 (312)
T 3hqi_A 165 LGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES---KKNRVEINDVEPE------VFKEMMCFIYT 235 (312)
T ss_dssp HHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC--------CCSEEEECSSCHH------HHHHHHHHHHH
T ss_pred HHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCcccc---CCceEEecCCCHH------HHHHHHHhhcC
Confidence 433344 8999999999999999999999999999999999887422 4467888777666 99999999999
Q ss_pred CCcCCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHHHcCCHhH
Q 008204 119 GMRKAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAALQCQLYPL 198 (574)
Q Consensus 119 g~v~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~~~g~~~L 198 (574)
|.+.. .. ..+.++|.+|.++++..+.+.|.+....... .++....|.+|..++..+|
T Consensus 236 ~~~~~---------~~-----------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~---~~n~~~~l~~A~~~~~~~L 292 (312)
T 3hqi_A 236 GKAPN---------LD-----------KMADDLLAAADKYALERLKVMCEDALCSNLS---VENAAEILILADLHSADQL 292 (312)
T ss_dssp SCCTT---------HH-----------HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC---TTTHHHHHHHHHHTTCHHH
T ss_pred CCCCC---------hH-----------HHHHHHHHHHHHhCHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHhCCHHH
Confidence 98743 11 5688999999999999999988877654322 3457789999999999999
Q ss_pred Hhhhhcccc
Q 008204 199 CSFCIQRIA 207 (574)
Q Consensus 199 l~~ga~~~~ 207 (574)
.+.|++...
T Consensus 293 ~~~~~~~i~ 301 (312)
T 3hqi_A 293 KTQAVDFIN 301 (312)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999887643
No 132
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.56 E-value=7.5e-16 Score=155.19 Aligned_cols=146 Identities=18% Similarity=0.220 Sum_probs=110.7
Q ss_pred hhhhhhcCCC-CCCCceEEEEc---CeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHH
Q 008204 36 NLRRQSSNPE-EPLLDAEIVVD---GKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFND 111 (574)
Q Consensus 36 ~l~~l~~~l~-~~~sDv~i~v~---g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~ 111 (574)
.++.|.+.+. +.||||+|+|+ |++|+|||+|||++|+||++||.+++.+. ...++.+.++.....+.+++|..
T Consensus 19 ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~---~~~~i~l~~~~~~~~v~~~~f~~ 95 (279)
T 3i3n_A 19 LSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSES---RSGRVEMRKWSSEPGPEPDTVEA 95 (279)
T ss_dssp HHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC-----------EEECCCCSSTTCSCHHHHHH
T ss_pred HHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccc---cCCeEEeccccccCCCCHHHHHH
Confidence 3444444344 99999999998 99999999999999999999999987422 44678887555444577779999
Q ss_pred HHHHHHhCCcCCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHH
Q 008204 112 ILHYLYTGMRKAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAAL 191 (574)
Q Consensus 112 lL~ylYtg~v~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~ 191 (574)
+|+|+|+|++.. +. +.+.++|.+|..+++..+.+.|.+....... .+++...+.+|.
T Consensus 96 ll~~~Ytg~~~i---------~~-----------~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~---~~n~~~i~~~A~ 152 (279)
T 3i3n_A 96 VIEYMYTGRIRV---------ST-----------GSVHEVLELADRFLLIRLKEFCGEFLKKKLH---LSNCVAIHSLAH 152 (279)
T ss_dssp HHHHHHHSEEEE---------ET-----------TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCC---TTTHHHHHHHHH
T ss_pred HHHhhCcCCccc---------CH-----------HHHHHHHHHHHHHCcHHHHHHHHHHHHHcCC---cchHHHHHHHHH
Confidence 999999998743 22 4588999999999999999888777654333 456788899999
Q ss_pred HcCCHhHHhhhhcccc
Q 008204 192 QCQLYPLCSFCIQRIA 207 (574)
Q Consensus 192 ~~g~~~Ll~~ga~~~~ 207 (574)
.++..+|.+.+.+...
T Consensus 153 ~~~~~~L~~~~~~~i~ 168 (279)
T 3i3n_A 153 MYTLSQLALKAADMIR 168 (279)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HcCcHHHHHHHHHHHH
Confidence 9999988888777644
No 133
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.55 E-value=2.2e-15 Score=133.69 Aligned_cols=104 Identities=23% Similarity=0.343 Sum_probs=79.2
Q ss_pred hhhhhcCCC-CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecc-cccccccccHHHHHHHHH
Q 008204 37 LRRQSSNPE-EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMT-DLVPYRKVGYEAFNDILH 114 (574)
Q Consensus 37 l~~l~~~l~-~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~-~l~~~~~vg~e~f~~lL~ 114 (574)
++.|.+.+. +.||||+|.|+|++|+|||+|||+||+||++||.+. ....+.+. ++.+. +|..+|+
T Consensus 21 ~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~-------~~~~i~l~~~~~~~------~f~~ll~ 87 (129)
T 3ga1_A 21 LECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS-------RSAVVELPAAVQPQ------SFQQILS 87 (129)
T ss_dssp HHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC-------CCSEEECCTTCCHH------HHHHHHH
T ss_pred HHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC-------CCCEEEECCCCCHH------HHHHHHH
Confidence 333433333 899999999999999999999999999999999986 23567774 55555 9999999
Q ss_pred HHHhCCcCCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhcccCcc
Q 008204 115 YLYTGMRKAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGWLLK 173 (574)
Q Consensus 115 ylYtg~v~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~gad 173 (574)
|+|+|++... . +.+.++|.+|..+++..+++.|.+....
T Consensus 88 ~iYtg~~~i~---------~-----------~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 88 FCYTGRLSMN---------V-----------GDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp HHHHSEEECC---------T-----------TTHHHHHHHHHHTTBTTSSCC-------
T ss_pred HHhCCccccC---------H-----------HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999987542 2 3478999999999999999888776543
No 134
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.51 E-value=3e-15 Score=130.93 Aligned_cols=89 Identities=15% Similarity=0.117 Sum_probs=73.8
Q ss_pred CCCCceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHHHHhCCcCCCC
Q 008204 46 EPLLDAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMRKAPP 125 (574)
Q Consensus 46 ~~~sDv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v~~~p 125 (574)
+.||||+|+|+|++|+|||+||||+|+||++ ....+.+.++.+ ++|..+|+|+|||++..
T Consensus 28 ~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~------------~~~~i~l~~v~~------~~f~~ll~fiYtg~~~i-- 87 (119)
T 3m5b_A 28 PALCDTLITVGSQEFPAHSLVLAGVSQQLGR------------RGQWALGEGISP------STFAQLLNFVYGESVEL-- 87 (119)
T ss_dssp TTTCCEEEEETTEEEEECHHHHHTTCGGGCC------------CEEEECCSSCCH------HHHHHHHHHHTTCCEEE--
T ss_pred CCCcceEEEECCEEEeeEHHHHHHcCHHHhc------------CCCEEEeCCCCH------HHHHHHHHHHcCCCcCc--
Confidence 8999999999999999999999999999974 123566655554 49999999999998743
Q ss_pred CCccccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhcccCc
Q 008204 126 SEVFTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGWLL 172 (574)
Q Consensus 126 ~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~ga 172 (574)
+. +.+.++|.+|..+++..+++.|.+...
T Consensus 88 -------~~-----------~~v~~ll~aA~~l~i~~l~~~C~~~~~ 116 (119)
T 3m5b_A 88 -------QP-----------GELRPLQEAARALGVQSLEEACWRARG 116 (119)
T ss_dssp -------CG-----------GGHHHHHHHHHHTTCHHHHHHHHHHC-
T ss_pred -------CH-----------HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 22 568899999999999999999876543
No 135
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=98.29 E-value=9.2e-07 Score=80.80 Aligned_cols=126 Identities=13% Similarity=0.102 Sum_probs=79.2
Q ss_pred eEEEE-cCeEeeeceeeeecccHHHHHHhhc-CCCCCCCCCCCceecccccccccccHHHHHHHHHHHHhCCcCCCCCCc
Q 008204 51 AEIVV-DGKSVAVNRSILSARSRFFHWLFHL-SSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMRKAPPSEV 128 (574)
Q Consensus 51 v~i~v-~g~~v~aHr~iLaarS~~F~~lf~~-~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v~~~p~~~ 128 (574)
|+++. +|+.|++||.+ |+.|+||++||.. ++.. +.....+.+.++.+. ++..+++|+|+++-.+.+...
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~--e~~~~~Ipl~~V~~~------iL~kViey~~~h~~~~~~~~~ 73 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDD--EGDDDPVPLPNVNAA------ILKKVIQWCTHHKDDPPPPED 73 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS--------CEECTTSCHH------HHHHHHHHHHHTTTCCC----
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcc--cccCCCcCCCCccHH------HHHHHHHHHHHcCcCCCCccc
Confidence 56654 69999999999 9999999999987 4320 112345666666665 999999999999754422210
Q ss_pred ccc----ccCcccccC--CCchhhhHHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHH
Q 008204 129 FTC----VDDTCVHLV--CPPAINYVIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAAL 191 (574)
Q Consensus 129 ~~c----~d~~~~~~~--c~p~i~~~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~ 191 (574)
..+ .+.....+. ..-....+.++|.+|.++++..++.++.+..++... |.||-.+-.
T Consensus 74 ~~~~~~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~------gkt~eeir~ 136 (159)
T 2ast_A 74 DENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK------GKTPEEIRK 136 (159)
T ss_dssp -------CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS------SCCHHHHHH
T ss_pred ccccccchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCCHHHHHH
Confidence 000 000000000 011226789999999999999999998877665543 566654433
No 136
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=97.87 E-value=2.6e-05 Score=64.88 Aligned_cols=84 Identities=11% Similarity=0.138 Sum_probs=56.2
Q ss_pred eEEEE-cCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHHHH-----h---CCc
Q 008204 51 AEIVV-DGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHYLY-----T---GMR 121 (574)
Q Consensus 51 v~i~v-~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylY-----t---g~v 121 (574)
|+++- +|++|++||.+ |+.|++|++||..... ..+.....+.++++.+. ++..+++|+| + +.+
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~-~~E~~~~~I~l~~V~~~------iL~kViey~~~h~~~~~~~~~i 75 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQ-FAENETNEVNFREIPSH------VLSKVCMYFTYKVRYTNSSTEI 75 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC---------CEEECTTSCHH------HHHHHHHHHHHHHHHTTCCSCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCC-ccccCCCceECCCCCHH------HHHHHHHHHHHhcccCCCcCCC
Confidence 44554 58999999999 9999999999986310 01123456777766666 9999999999 4 222
Q ss_pred CCCCCCccccccCcccccCCCchhhhHHHHHHHHHHcC
Q 008204 122 KAPPSEVFTCVDDTCVHLVCPPAINYVIESIYASAAFK 159 (574)
Q Consensus 122 ~~~p~~~~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~ 159 (574)
... -++. ..+.++|.+|.+++
T Consensus 76 ~~~------~i~~-----------~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 76 PEF------PIAP-----------EIALELLMAANFLD 96 (97)
T ss_dssp CCC------CCCG-----------GGHHHHHHHHHHHT
T ss_pred CcC------cCCH-----------HHHHHHHHHHhhhC
Confidence 211 0222 67889999998765
No 137
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=97.48 E-value=0.00022 Score=63.52 Aligned_cols=121 Identities=12% Similarity=0.085 Sum_probs=77.5
Q ss_pred eEEEE-cCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHHHHhCCcCCCCCCcc
Q 008204 51 AEIVV-DGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMRKAPPSEVF 129 (574)
Q Consensus 51 v~i~v-~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v~~~p~~~~ 129 (574)
|+++. +|+.|.+||.+ |..|++|++||.... ...+.+.++... ++..+++|.|+.+-...+....
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~-------~~~Ipl~~V~~~------iL~kVieyc~~h~~~~~~~~~~ 69 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG-------MDPVPLPNVNAA------ILKKVIQWCTHHKDDPPPPEDD 69 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC-------CSSEECTTCCHH------HHHHHHHHHHHHTTCC------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC-------CCceecCCcCHH------HHHHHHHHHHHhccCCCccccc
Confidence 55665 58999999998 999999999998631 135666665555 9999999999886433221100
Q ss_pred cc----ccCcc-ccc-CCCchhhhHHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHHHH
Q 008204 130 TC----VDDTC-VHL-VCPPAINYVIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVAAL 191 (574)
Q Consensus 130 ~c----~d~~~-~~~-~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~A~ 191 (574)
.+ .+.-. |.. =..-....+.+++.+|.++++..++.++.+..++... |.||=.+-.
T Consensus 70 ~~~~~~~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik------gkt~eeiR~ 131 (141)
T 1fs1_B 70 ENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK------GKTPEEIRK 131 (141)
T ss_dssp -----------HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT------TCCHHHHHH
T ss_pred cccccchhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHc------CCCHHHHHH
Confidence 00 00000 000 0011226788999999999999999998887766543 566554433
No 138
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=97.08 E-value=6.3e-05 Score=68.54 Aligned_cols=120 Identities=10% Similarity=0.076 Sum_probs=49.9
Q ss_pred eEEEE-cCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHHHHhCCcCCCCCCcc
Q 008204 51 AEIVV-DGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMRKAPPSEVF 129 (574)
Q Consensus 51 v~i~v-~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v~~~p~~~~ 129 (574)
|+++. +|+.|.+||.+ |..|++|+.||.... ....+.+.++... ++..+++|+|+.+-.+.+....
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~------~~~~Ipl~~V~~~------iL~kVieyc~~h~~~~~~~~~~ 72 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC------VDNGVPLPNVTSK------ILAKVIEYCKRHVEAAASKAEA 72 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC------------------CCTTSCHH------HHHHHHHC--------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC------CCCceeCCcCcHH------HHHHHHHHHHHcccCCCccccc
Confidence 45553 69999999998 999999999997653 1124555555555 9999999999986433111100
Q ss_pred c-----cccCcccccC--CCchhhhHHHHHHHHHHcCchhhHhhhcccCcccchhccccCCchHHHH
Q 008204 130 T-----CVDDTCVHLV--CPPAINYVIESIYASAAFKMTEVVSVYEGWLLKVVREALVEDVIPILVA 189 (574)
Q Consensus 130 ~-----c~d~~~~~~~--c~p~i~~~~elL~~A~~~~~~elv~~Ll~~gadvn~~~~~~~g~t~L~~ 189 (574)
. ..+.-...+. ..-....+.+++.+|.++++..|+.++.+..++... |.||=.+
T Consensus 73 ~~~~~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik------gkt~eei 133 (160)
T 2p1m_A 73 VEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIK------GKTPEEI 133 (160)
T ss_dssp ----------------------------CHHHHHHTTCHHHHHHHHHHHHHTTT------TCCHHHH
T ss_pred ccccccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCCHHHH
Confidence 0 0000000000 001125678899999999999999998877766543 5565443
No 139
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=95.65 E-value=0.017 Score=48.54 Aligned_cols=93 Identities=19% Similarity=0.274 Sum_probs=63.8
Q ss_pred eEEEEcCeEeeeceeeeeccc-HHHHHHhhcCCCCC-CCCCCCceecccccccccccHHHHHHHHHHHHhCCcCCCCCCc
Q 008204 51 AEIVVDGKSVAVNRSILSARS-RFFHWLFHLSSDGS-VSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMRKAPPSEV 128 (574)
Q Consensus 51 v~i~v~g~~v~aHr~iLaarS-~~F~~lf~~~~~~~-~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v~~~p~~~ 128 (574)
|+|.|+|+.|...+..|.... .+|..||.+...-. ......++-+ |-.|. .|..+|.|+.+|++..+
T Consensus 8 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~------~F~~IL~~lr~g~l~~p---- 76 (107)
T 3drz_A 8 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPT------YFGPVLNYLRHGKLVIN---- 76 (107)
T ss_dssp EEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHH------HHHHHHHHHHHSCCCCC----
T ss_pred EEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChH------HHHHHHHHhCCCeeCCC----
Confidence 678899999999999998765 47888887642100 0111122322 33344 99999999999987442
Q ss_pred cccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhcc
Q 008204 129 FTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEG 169 (574)
Q Consensus 129 ~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~ 169 (574)
++ -....++..|..|++.++++.|.+
T Consensus 77 ----~~-----------~~~~~l~~Ea~fy~l~~L~~~l~~ 102 (107)
T 3drz_A 77 ----KD-----------LAEEGVLEEAEFYNITSLIKLVKD 102 (107)
T ss_dssp ----TT-----------SCHHHHHHHHHHHTCHHHHHHHHH
T ss_pred ----CC-----------CCHHHHHHHHHHCCCHHHHHHHHH
Confidence 11 112467889999999999998754
No 140
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=94.85 E-value=0.055 Score=44.40 Aligned_cols=90 Identities=11% Similarity=0.182 Sum_probs=56.3
Q ss_pred eEEEE-cCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHHHHhCCcCC-CCCCc
Q 008204 51 AEIVV-DGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMRKA-PPSEV 128 (574)
Q Consensus 51 v~i~v-~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v~~-~p~~~ 128 (574)
|+++- +|..|.++|.+ |..|.+++.||..... ..+.....+.+.++... .+..+++|+|.-+-.. .....
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~-~~e~~~~~Ipl~~V~~~------iL~kVieyc~~h~~~~~~~~~i 74 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQ-FAENETNEVNFREIPSH------VLSKVCMYFTYKVRYTNSSTEI 74 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC---------CEEECSSCCHH------HHHHHHHHHHHHHHHHSCCSCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCC-cccccCCceeCCCCCHH------HHHHHHHHHHHccccCCCcccC
Confidence 45554 59999999996 9999999999985320 01112235666665555 9999999998754211 11111
Q ss_pred cc-cccCcccccCCCchhhhHHHHHHHHHHcC
Q 008204 129 FT-CVDDTCVHLVCPPAINYVIESIYASAAFK 159 (574)
Q Consensus 129 ~~-c~d~~~~~~~c~p~i~~~~elL~~A~~~~ 159 (574)
.. -++. ..+.+++.+|.+++
T Consensus 75 ~~w~vd~-----------~~l~eLi~AAnyLd 95 (96)
T 2fnj_C 75 PEFPIAP-----------EIALELLMAANFLD 95 (96)
T ss_dssp CCCCCCT-----------TTHHHHHHHHHHHT
T ss_pred CCcccCH-----------HHHHHHHHHHHHhC
Confidence 00 1222 56889999988765
No 141
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=94.76 E-value=0.087 Score=43.44 Aligned_cols=92 Identities=15% Similarity=0.154 Sum_probs=58.7
Q ss_pred eEEEE-cCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHHHHhCCcCCCCCCcc
Q 008204 51 AEIVV-DGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMRKAPPSEVF 129 (574)
Q Consensus 51 v~i~v-~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v~~~p~~~~ 129 (574)
|+++- +|..|.++|.+ |..|.+++.||..+. + .....+.+.++... .+..+++|+|.-+-...+....
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e---~~~~~Iplp~V~~~------iL~kVieyc~~h~~~~~~~~~~ 74 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-R---ESKGRIELKQFDSH------ILEKAVEYLNYNLKYSGVSEDD 74 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-T---TCTTEEEETTSCHH------HHHHHHHHHHHHHHHHHHCSSC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-c---cCCCceecCCcCHH------HHHHHHHHHHHhcccCCCcccc
Confidence 56665 69999999997 999999999998743 1 12245666666665 9999999998754211110000
Q ss_pred ccccCcccccCCCchhhhHHHHHHHHHHcC
Q 008204 130 TCVDDTCVHLVCPPAINYVIESIYASAAFK 159 (574)
Q Consensus 130 ~c~d~~~~~~~c~p~i~~~~elL~~A~~~~ 159 (574)
..+.+ + .-....+.+++.+|.+++
T Consensus 75 ~~i~~--w----~vd~~~lfeLi~AAnyLd 98 (99)
T 1hv2_A 75 DEIPE--F----EIPTEMSLELLLAADYLS 98 (99)
T ss_dssp SSCCC--C----CCCHHHHHHHHHHHHHHC
T ss_pred ccCCC--c----cCCHHHHHHHHHHHHHhC
Confidence 00000 1 112256888999888765
No 142
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=94.47 E-value=0.062 Score=48.99 Aligned_cols=118 Identities=10% Similarity=0.101 Sum_probs=70.3
Q ss_pred eEEEE-cCeEeeeceeeeecccHHHHHHhhcCCCCC-CCCCCCceecccccccccccHHHHHHHHHHHHhCCcCCCCCCc
Q 008204 51 AEIVV-DGKSVAVNRSILSARSRFFHWLFHLSSDGS-VSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMRKAPPSEV 128 (574)
Q Consensus 51 v~i~v-~g~~v~aHr~iLaarS~~F~~lf~~~~~~~-~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v~~~p~~~ 128 (574)
|+++- +|..|.++|.+ |.+|.+++.|+....... .......+.+.++... .+..+++|.+.-+-.+.|...
T Consensus 9 i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~------iL~kVieyc~~h~~~~~~~~~ 81 (169)
T 3v7d_A 9 VVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSS------VLQKVIEWAEHHRDSNFPDED 81 (169)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHH------HHHHHHHHHHHTTTCCCCC--
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHH------HHHHHHHHHHHcccCCCcccc
Confidence 44444 48999999997 889999999997542100 0011245666655555 999999999987654432210
Q ss_pred c---ccccCccccc--CCCchhhhHHHHHHHHHHcCchhhHhhhcccCcccc
Q 008204 129 F---TCVDDTCVHL--VCPPAINYVIESIYASAAFKMTEVVSVYEGWLLKVV 175 (574)
Q Consensus 129 ~---~c~d~~~~~~--~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~gadvn 175 (574)
. ...+.....+ =..-....+.+++.+|.++++..|+.++.+..++..
T Consensus 82 ~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~i 133 (169)
T 3v7d_A 82 DDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMI 133 (169)
T ss_dssp ------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 0 0000000000 000112568899999999999999998877766543
No 143
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=90.39 E-value=0.56 Score=43.63 Aligned_cols=96 Identities=20% Similarity=0.260 Sum_probs=65.2
Q ss_pred eEEEEcCeEeeeceeeeeccc-HHHHHHhhcCCCC-CCCCCCCceecccccccccccHHHHHHHHHHHHhCCcCCCCCCc
Q 008204 51 AEIVVDGKSVAVNRSILSARS-RFFHWLFHLSSDG-SVSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMRKAPPSEV 128 (574)
Q Consensus 51 v~i~v~g~~v~aHr~iLaarS-~~F~~lf~~~~~~-~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v~~~p~~~ 128 (574)
|+|.|+|+.|..-+..|..-. .+|..||.+...- .......++.+ |-.|. .|..+|.|+.+|++..+ .
T Consensus 14 V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~------~F~~ILnyLRtG~L~lP-~-- 83 (202)
T 3drx_A 14 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPT------YFGPVLNYLRHGKLVIN-K-- 83 (202)
T ss_dssp EEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCST------THHHHHHHHHHSCCCCC-T--
T ss_pred EEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChH------HHHHHHHHhcCCccCCC-C--
Confidence 678899999999999998654 3788888764310 00111223333 33455 89999999999987542 1
Q ss_pred cccccCcccccCCCchhhhHHHHHHHHHHcCchhhHhhhcccCc
Q 008204 129 FTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVVSVYEGWLL 172 (574)
Q Consensus 129 ~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv~~Ll~~ga 172 (574)
+ -....++.-|.+|++.++++.|.+...
T Consensus 84 -----~-----------~~~~~l~eEA~FygL~~Lv~~l~~~i~ 111 (202)
T 3drx_A 84 -----D-----------LAEEGVLEEAEFYNITSLIKLVKDKIR 111 (202)
T ss_dssp -----T-----------SCHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -----C-----------CCHHHHHHHHHHCCcHHHHHHHHHHHH
Confidence 1 112457889999999999998876543
No 144
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=86.48 E-value=0.97 Score=37.96 Aligned_cols=91 Identities=13% Similarity=0.202 Sum_probs=55.4
Q ss_pred eEEE-EcCeEeeeceeeeecccHHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHHHHhCCcCC-CCCCc
Q 008204 51 AEIV-VDGKSVAVNRSILSARSRFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMRKA-PPSEV 128 (574)
Q Consensus 51 v~i~-v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v~~-~p~~~ 128 (574)
|+++ -+|..|.++|. +|..|..++.|+..... ..+.....+.+.++... .+..+++|.+.-+-.. .+..+
T Consensus 19 v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~-~~e~~~~~IplpnV~s~------iL~kVieyc~~h~~~~~~~~~i 90 (112)
T 1vcb_B 19 VKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQ-FAENETNEVNFREIPSH------VLSKVCMYFTYKVRYTNSSTEI 90 (112)
T ss_dssp EEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC---------CEEECSSCCHH------HHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCC-cccccCCceeCCCCCHH------HHHHHHHHHHHhhhccCCcCCC
Confidence 4555 35899999999 58999999999975320 00111235666665555 9999999998654211 11111
Q ss_pred cccccCcccccCCCchhhhHHHHHHHHHHcC
Q 008204 129 FTCVDDTCVHLVCPPAINYVIESIYASAAFK 159 (574)
Q Consensus 129 ~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~ 159 (574)
.. + .-....+.+++.+|.+++
T Consensus 91 ~~------w----~vd~~~lfeLi~AAnyLd 111 (112)
T 1vcb_B 91 PE------F----PIAPEIALELLMAANFLD 111 (112)
T ss_dssp CC------C----CCCHHHHHHHHHHHHHHT
T ss_pred CC------c----ccCHHHHHHHHHHHHHhC
Confidence 00 0 112267888999988765
No 145
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=53.95 E-value=12 Score=31.33 Aligned_cols=85 Identities=15% Similarity=0.106 Sum_probs=51.4
Q ss_pred eEEEEcCeEeeeceeeeecccH-HHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHHHHhCCcCCCCCCcc
Q 008204 51 AEIVVDGKSVAVNRSILSARSR-FFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMRKAPPSEVF 129 (574)
Q Consensus 51 v~i~v~g~~v~aHr~iLaarS~-~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v~~~p~~~~ 129 (574)
|+|.|||+.|...+..|..-.. +|..||.+... -.....++-+ |-.|. .|..+|.|+.+|++..+ ..
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~--~~~~~g~~Fi-DRdp~------~F~~ILnylR~G~l~~p-~~-- 74 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLN--YDPVLNEYFF-DRHPG------VFAQIINYYRSGKLHYP-TD-- 74 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTT--EETTTTEEEE-CSCTT------THHHHHHHHHHSCBCCC-SS--
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCC--CCCCCCcEEE-ecChH------HHHHHHHHhcCCCCCCC-Cc--
Confidence 6788999999999988875422 23334432110 0001122222 33344 89999999999987542 21
Q ss_pred ccccCcccccCCCchhhhHHHHHHHHHHcCchhh
Q 008204 130 TCVDDTCVHLVCPPAINYVIESIYASAAFKMTEV 163 (574)
Q Consensus 130 ~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~el 163 (574)
-....++.-|..|++.+.
T Consensus 75 ----------------~~~~~~~~Ea~fy~i~~~ 92 (115)
T 3kvt_A 75 ----------------VCGPLFEEELEFWGLDSN 92 (115)
T ss_dssp ----------------SCHHHHHHHHHHHTCCGG
T ss_pred ----------------ccHHHHHHHHHHhCCChH
Confidence 013457788888888764
No 146
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=42.41 E-value=21 Score=30.25 Aligned_cols=85 Identities=18% Similarity=0.201 Sum_probs=50.0
Q ss_pred eEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCC-CCCCCCceecccccccccccHHHHHHHHHHHHhCCcCCCCCCcc
Q 008204 51 AEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGS-VSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMRKAPPSEVF 129 (574)
Q Consensus 51 v~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~-~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v~~~p~~~~ 129 (574)
|+|.|||+.|..-+..|..--. .+|....+.. -.....++-+ |- ..+.|..+|.|+.+|++.. |..+
T Consensus 15 V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi-DR------dp~~F~~ILnflR~G~l~~-p~~~- 82 (124)
T 1s1g_A 15 IVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DR------DPEVFRCVLNFYRTGKLHY-PRYE- 82 (124)
T ss_dssp EEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE-CS------CHHHHHHHHHHHHHSCBCC-CTTS-
T ss_pred EEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE-cC------ChHHHHHHHHHHhcCCCCC-CCCc-
Confidence 6788999999999988864321 2332210000 0001112221 11 3348999999999998753 2221
Q ss_pred ccccCcccccCCCchhhhHHHHHHHHHHcCchhhH
Q 008204 130 TCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVV 164 (574)
Q Consensus 130 ~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv 164 (574)
....++.-|..|++..++
T Consensus 83 -----------------~~~~l~~Ea~fy~i~~l~ 100 (124)
T 1s1g_A 83 -----------------CISAYDDELAFYGILPEI 100 (124)
T ss_dssp -----------------CHHHHHHHHHHTTCCGGG
T ss_pred -----------------CHHHHHHHHHHcCCChHH
Confidence 145678888899988764
No 147
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=40.79 E-value=75 Score=25.60 Aligned_cols=86 Identities=14% Similarity=0.096 Sum_probs=50.2
Q ss_pred eEEEEcCeEeeeceeeeeccc-HHHHHHhhcCCCCCCCCCCCceecccccccccccHHHHHHHHHHHHh-CCcCCCCCCc
Q 008204 51 AEIVVDGKSVAVNRSILSARS-RFFHWLFHLSSDGSVSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYT-GMRKAPPSEV 128 (574)
Q Consensus 51 v~i~v~g~~v~aHr~iLaarS-~~F~~lf~~~~~~~~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYt-g~v~~~p~~~ 128 (574)
|+|.|+|+.|...+..|..-- ..+..|+..... - .....++-+ |-.|. .|..+|.|+.+ |++..+ ..
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~-~-~~~~~eyFi-DRdp~------~F~~ILnflR~~G~l~~p-~~- 71 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRY-Y-DPLRNEYFF-DRNRP------SFDAILYFYQSGGRLRRP-VN- 71 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGG-E-ETTTTEEEE-CSCST------THHHHHHHHHTTSCCCCC-TT-
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccc-c-CCCceeEEE-cCChH------HHHHHHHHHhcCCcccCC-CC-
Confidence 678899999999998885321 112222221100 0 001123332 33444 89999999999 887432 22
Q ss_pred cccccCcccccCCCchhhhHHHHHHHHHHcCchhhH
Q 008204 129 FTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVV 164 (574)
Q Consensus 129 ~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv 164 (574)
-....++.-|..+++.+.+
T Consensus 72 -----------------~~~~~~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 72 -----------------VPLDVFSEEIKFYELGENA 90 (100)
T ss_dssp -----------------SCHHHHHHHHHHTTCCHHH
T ss_pred -----------------CCHHHHHHHHHHcCCCHHH
Confidence 1134677888888887754
No 148
>1d8b_A SGS1 RECQ helicase; five helices, three-helical bundle flanked by two helices, DNA binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.60.8.1
Probab=38.88 E-value=22 Score=27.57 Aligned_cols=66 Identities=20% Similarity=0.216 Sum_probs=45.8
Q ss_pred HHHHHHHHHhhhhhcccccCCChhhhhhhhccCCCCcccchhccccCCccccccccCCChHHHHHHhhhhhhhHHHHHH
Q 008204 455 CQLRLLTLLKTVETGQRYFPHCSDVVDKFRYCNRPHCLELVDEFLDCDWSDASLLEKGTPEERKLKRAGFMKLEADMQE 533 (574)
Q Consensus 455 ~~~rl~~l~ktve~~~r~fp~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (574)
.-++|+++. ++.+.|++|..+.++.+. +|-.+-..|.....+...+++.++..+ ++|.-.|+.+-+
T Consensus 8 ay~~Lr~~~--i~~s~~~~p~~s~~m~d~-------~Lrk~A~~LP~~e~eF~~L~g~~~~~~----~~fk~FK~~l~~ 73 (81)
T 1d8b_A 8 TYERLRELS--LNLGNRMVPPVGNFMPDS-------ILKKMAAILPMNDSAFATLGTVEDKYR----RRFKYFKATIAD 73 (81)
T ss_dssp HHHHHHHHH--HHHHHSSSSCCSCSSCHH-------HHHHHHHHCCCSHHHHGGGSCCCHHHH----HHGGGTHHHHHH
T ss_pred HHHHHHHHH--HHHhhccCCchhhhccHH-------HHHHHHHHCCCCHHHHHHccCCCHHHH----HHHHHHHHHHHH
Confidence 345566665 788999999877766665 455566678888889999999996554 445555555544
No 149
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=36.92 E-value=19 Score=31.26 Aligned_cols=86 Identities=17% Similarity=0.198 Sum_probs=50.4
Q ss_pred ceEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCC-CCCCCCceecccccccccccHHHHHHHHHHHHhCCcCCCCCCc
Q 008204 50 DAEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGS-VSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMRKAPPSEV 128 (574)
Q Consensus 50 Dv~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~-~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v~~~p~~~ 128 (574)
-|+|.|||+.|...+..|..-- ..||....+.. -.....++.+ | =.-+.|..+|.|+-+|++..+ ..
T Consensus 36 ~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi-D------Rdp~~F~~ILnflR~G~l~~p-~~- 103 (140)
T 2nz0_B 36 LIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-D------RDPEVFRCVLNFYRTGKLHYP-RY- 103 (140)
T ss_dssp EEEEEETTEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE-C------SCHHHHHHHHHHHHHSSBCCC-TT-
T ss_pred EEEEEECCEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE-e------CCcHHHHHHHHHHhcCCcCCC-CC-
Confidence 4778899999999998886432 22333210000 0001112221 1 133589999999999987532 21
Q ss_pred cccccCcccccCCCchhhhHHHHHHHHHHcCchhhH
Q 008204 129 FTCVDDTCVHLVCPPAINYVIESIYASAAFKMTEVV 164 (574)
Q Consensus 129 ~~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~elv 164 (574)
-....++.-|..|++..++
T Consensus 104 -----------------~~~~~l~eEa~fy~i~~l~ 122 (140)
T 2nz0_B 104 -----------------ECISAYDDELAFYGILPEI 122 (140)
T ss_dssp -----------------SCHHHHHHHHHHHTCCGGG
T ss_pred -----------------cCHHHHHHHHHHcCCChHH
Confidence 1145678888888888764
No 150
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=29.45 E-value=23 Score=28.93 Aligned_cols=84 Identities=19% Similarity=0.196 Sum_probs=48.0
Q ss_pred eEEEEcCeEeeeceeeeecccHHHHHHhhcCCCCC-CCCCCCceecccccccccccHHHHHHHHHHHHhCCcCCCCCCcc
Q 008204 51 AEIVVDGKSVAVNRSILSARSRFFHWLFHLSSDGS-VSEGKPKYLMTDLVPYRKVGYEAFNDILHYLYTGMRKAPPSEVF 129 (574)
Q Consensus 51 v~i~v~g~~v~aHr~iLaarS~~F~~lf~~~~~~~-~~~~~~~~~l~~l~~~~~vg~e~f~~lL~ylYtg~v~~~p~~~~ 129 (574)
|+|.|||+.|...+..|..-.. .||....+.. -.....++-+ |=.|. .|..+|.|+-+|++..+ ..
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~------~F~~ILnflR~g~l~~p-~~-- 68 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPD------IFRHILNFYRTGKLHYP-RH-- 68 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTT------THHHHHHHHHHSCBCCC-TT--
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcH------HHHHHHHHHhcCCCCCC-CC--
Confidence 6889999999999988864321 2232210000 0000111111 22333 89999999999987432 11
Q ss_pred ccccCcccccCCCchhhhHHHHHHHHHHcCchhh
Q 008204 130 TCVDDTCVHLVCPPAINYVIESIYASAAFKMTEV 163 (574)
Q Consensus 130 ~c~d~~~~~~~c~p~i~~~~elL~~A~~~~~~el 163 (574)
-....++.-|..|++..+
T Consensus 69 ----------------~~~~~l~~Ea~fy~i~~l 86 (105)
T 1nn7_A 69 ----------------ECISAYDEELAFFGLIPE 86 (105)
T ss_dssp ----------------SCHHHHHHHHHHHTCCSC
T ss_pred ----------------cCHHHHHHHHHHcCCCHH
Confidence 013557788888888765
No 151
>2kzi_A Engineered protein, ZHER2 affibody; protein binding; NMR {Staphylococcus aureus} PDB: 2kzj_A 2otk_E
Probab=27.67 E-value=29 Score=25.84 Aligned_cols=41 Identities=7% Similarity=0.084 Sum_probs=35.9
Q ss_pred ccccccccCCChHHHHHHhhhhhhhHHHHHHHHhhhhhhhc
Q 008204 503 WSDASLLEKGTPEERKLKRAGFMKLEADMQEALRKDVAYHR 543 (574)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (574)
-++++.+...|.+.|..+++.++|=...=+++|+|-|.+.|
T Consensus 25 FYeiL~~pnLtEeQrngfI~slkddPs~Sqev~aEa~K~nd 65 (70)
T 2kzi_A 25 YWEIALLPNLNNQQKRAFIRSLYDDPSQSANLLAEAKKLND 65 (70)
T ss_dssp SHHHHHCSSSCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHcCCCcchhhhhccccccccCccHHHHHHhhhccccc
Confidence 45778889999999999999999999999999999887665
No 152
>3qwo_C Motavizumab epitope scaffold; immune complex, immune system; HET: EDO; 1.90A {Staphylococcus aureus} SCOP: a.8.1.1
Probab=25.94 E-value=35 Score=24.34 Aligned_cols=40 Identities=10% Similarity=0.033 Sum_probs=34.2
Q ss_pred cccccccCCChHHHHHHhhhhhhhHHHHHHHHhhhhhhhc
Q 008204 504 SDASLLEKGTPEERKLKRAGFMKLEADMQEALRKDVAYHR 543 (574)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (574)
++++.+...|+|.|..+++.++|==..=+++|++-|..+|
T Consensus 11 Yeil~lpnLtEeqRn~yI~slkdDPs~S~~v~~Ea~k~nd 50 (57)
T 3qwo_C 11 NEIANLPNLNEEQRSAFLSSINDDPSQSANLLAEAKKLND 50 (57)
T ss_dssp HHHHHCTTCCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHcCCCcchhhccchHhhhccCcchhHHHHHhhhcccc
Confidence 4677888889999999999988888888999999887766
No 153
>3gna_A RAG-1, V(D)J recombination-activating protein 1; DNA recombination, DNA-binding, endonucle hydrolase; 2.40A {Mus musculus} PDB: 3gnb_A
Probab=24.57 E-value=51 Score=25.21 Aligned_cols=24 Identities=8% Similarity=0.201 Sum_probs=18.7
Q ss_pred HHHHhhhhhhhHHHHHHHHhhhhhhh
Q 008204 517 RKLKRAGFMKLEADMQEALRKDVAYH 542 (574)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (574)
|+..|.|..|||-+| |+|+. |+|.
T Consensus 33 rraqkhrlrelk~qv-k~Fad-kEeg 56 (96)
T 3gna_A 33 RRAQKHRLRELKIQV-KEFAD-KEEG 56 (96)
T ss_dssp HHHHHHHHHHHHHHH-HHHHH-HHST
T ss_pred HHHHHHHHHHHHHHH-HHHHh-HhhC
Confidence 566688999999887 68886 6664
No 154
>1xaw_A Occludin; coiled-coil, cell adhesion; 1.45A {Homo sapiens} SCOP: h.4.17.1 PDB: 1wpa_A 3g7c_A
Probab=22.29 E-value=81 Score=27.18 Aligned_cols=32 Identities=13% Similarity=0.120 Sum_probs=26.3
Q ss_pred cccccccCCChHHHHHHhh-------hhhhhHHHHHHHH
Q 008204 504 SDASLLEKGTPEERKLKRA-------GFMKLEADMQEAL 535 (574)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 535 (574)
....+..+.+.|+|+.|++ .+++|.+.|+.+-
T Consensus 34 y~~~Yp~I~S~eqR~rYK~~F~~dy~EYk~Lhaev~~v~ 72 (140)
T 1xaw_A 34 WIREYPPITSDQQRQLYKRNFDTGLQEYKSLQSVLDEIN 72 (140)
T ss_dssp CTTTSCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3566788889999999998 6788998888773
No 155
>1dee_G Immunoglobulin G binding protein A; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Staphylococcus aureus} SCOP: a.8.1.1
Probab=21.60 E-value=46 Score=23.47 Aligned_cols=40 Identities=5% Similarity=-0.060 Sum_probs=33.4
Q ss_pred cccccccCCChHHHHHHhhhhhhhHHHHHHHHhhhhhhhc
Q 008204 504 SDASLLEKGTPEERKLKRAGFMKLEADMQEALRKDVAYHR 543 (574)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (574)
+.++.+...|.|.|..+++..++=...=+++|++-+.+.|
T Consensus 10 Yeil~lp~lte~qrng~i~slkddPs~s~ev~~ea~K~nd 49 (54)
T 1dee_G 10 YEILNMPNLNEAQRNGFIQSLKDDPSQSTNVLGEAKKLNE 49 (54)
T ss_dssp HHHHHCSSSCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHcCCCcchhhhcccccccccCcchhHHHHHhhhhccc
Confidence 4677888899999999999998888888889988776554
Done!