Your job contains 1 sequence.
>008209
MSLCFCVLLGGRYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKN
RPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQI
HMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEP
APPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPIS
KASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDL
VHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYN
CSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS
WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVA
HLERTGQYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIA
PHYYDLSNFPQCEAKRVLERLYRKREKERENNRK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008209
(574 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 2610 2.0e-271 1
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 2605 6.6e-271 1
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 2221 3.3e-230 1
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 2165 2.8e-224 1
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 2164 3.6e-224 1
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 2164 3.6e-224 1
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 2164 3.6e-224 1
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 2164 3.6e-224 1
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 2164 3.6e-224 1
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 2164 3.6e-224 1
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 2142 7.7e-222 1
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 2049 5.5e-212 1
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 2049 5.5e-212 1
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 1904 1.3e-196 1
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 1875 1.5e-193 1
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 1859 7.5e-192 1
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 1821 7.9e-188 1
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 1794 5.8e-185 1
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 1780 1.8e-183 1
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 1474 4.7e-151 1
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 1469 1.6e-150 1
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 1467 2.6e-150 1
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 1446 9.5e-150 2
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 1458 2.3e-149 1
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 1449 2.1e-148 1
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 1449 2.1e-148 1
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 1442 1.2e-147 1
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 1442 1.2e-147 1
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 1442 1.2e-147 1
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 1442 1.2e-147 1
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 1442 1.2e-147 1
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 1442 1.2e-147 1
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 1442 1.2e-147 1
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 1439 2.4e-147 1
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 1435 6.4e-147 1
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 1433 1.0e-146 1
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 1427 4.5e-146 1
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 1421 1.9e-145 1
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 1421 1.9e-145 1
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 1415 8.4e-145 1
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 1415 8.4e-145 1
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 1414 1.1e-144 1
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 1413 1.4e-144 1
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 1413 1.4e-144 1
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 1413 1.4e-144 1
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 1413 1.4e-144 1
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 1411 2.2e-144 1
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 1403 1.6e-143 1
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 1373 3.8e-142 2
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 1373 3.8e-142 2
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 1371 3.9e-140 1
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 1353 6.3e-140 2
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 1349 8.3e-138 1
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 1342 4.6e-137 1
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 1341 5.8e-137 1
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 1341 5.8e-137 1
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 1337 1.5e-136 1
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 1337 1.5e-136 1
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 1277 3.5e-130 1
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 1272 1.2e-129 1
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 1272 1.2e-129 1
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 1262 1.4e-128 1
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 1262 1.4e-128 1
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 1261 1.7e-128 1
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 1259 2.8e-128 1
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 1258 3.6e-128 1
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 1258 3.6e-128 1
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 1254 9.6e-128 1
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 1250 2.6e-127 1
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 1248 4.2e-127 1
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 1244 1.1e-126 1
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 1243 1.4e-126 1
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 1243 1.4e-126 1
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 1242 1.8e-126 1
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 1241 2.3e-126 1
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 1236 7.8e-126 1
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 1231 2.6e-125 1
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 1229 4.3e-125 1
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 1202 3.1e-122 1
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 1196 1.3e-121 1
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 1183 3.2e-120 1
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 1095 1.5e-119 2
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 1094 2.0e-119 2
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 1174 2.9e-119 1
DICTYBASE|DDB_G0269306 - symbol:dhx35 "DEAD/DEAH box heli... 999 3.2e-119 2
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 1167 1.6e-118 1
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 834 7.6e-118 2
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 834 7.6e-118 2
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 1160 8.8e-118 1
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 1136 4.2e-117 2
TAIR|locus:2147785 - symbol:AT5G14900 species:3702 "Arabi... 1136 4.2e-117 2
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 1147 2.1e-116 1
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 1141 9.1e-116 1
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 1140 1.2e-115 1
UNIPROTKB|G4MKC3 - symbol:MGG_02518 "ATP-dependent RNA he... 1120 1.5e-113 1
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 967 2.3e-112 2
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 1108 2.9e-112 1
WB|WBGene00022056 - symbol:Y67D2.6 species:6239 "Caenorha... 1108 2.9e-112 1
UNIPROTKB|I3L1L6 - symbol:DHX33 "Putative ATP-dependent R... 1100 2.0e-111 1
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 1100 2.0e-111 1
WARNING: Descriptions of 214 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 2610 (923.8 bits), Expect = 2.0e-271, P = 2.0e-271
Identities = 492/543 (90%), Positives = 518/543 (95%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+YLTDGMLLREAM DPLLERYKVI+LDEAHERTLATDVLFGLLKEVL+NRPDLKLVVMSA
Sbjct: 165 KYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSA 224
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TLEAEKFQ YF GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP GDILV
Sbjct: 225 TLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILV 284
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTGEEEIEDACRKI KE++N+GDQVGPVKVVPLYSTLPPAMQQKIF+
Sbjct: 285 FLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPA 344
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPR+RVESLLVSPISKASAHQRSGRA
Sbjct: 345 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRA 404
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT+PGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP
Sbjct: 405 GRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 464
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETLMRALEVLNYLGALDD+GNLT+ GE MSEFPLDPQMSKML+ SP++NCSNEILS+SAM
Sbjct: 465 ETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAM 524
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP+WC++NFVN+RA
Sbjct: 525 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRA 584
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
+KSADNVRQQLVRIM+RFNLK+CS DFNSRDYYVNIRKAMLAGYFMQVAHLERTG YLTV
Sbjct: 585 MKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTV 644
Query: 492 KDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQ 551
KDNQVVHLHPSNCLDHKPEWVIYNEYVLT+RNFIRTVTD+RGEWL+D+A HYYDLSNFP
Sbjct: 645 KDNQVVHLHPSNCLDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPN 704
Query: 552 CEA 554
CEA
Sbjct: 705 CEA 707
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 2605 (922.1 bits), Expect = 6.6e-271, P = 6.6e-271
Identities = 489/543 (90%), Positives = 517/543 (95%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+YLTDGMLLREAM DPLLERYKVI+LDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA
Sbjct: 161 KYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 220
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TLEAEKFQ YF GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP GDILV
Sbjct: 221 TLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILV 280
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTGEEEIEDACRKI KE+ N+GDQVGP+KVVPLYSTLPPAMQQKIF+
Sbjct: 281 FLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPP 340
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPR+RVESLLVSPISKASAHQRSGRA
Sbjct: 341 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRA 400
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT+PGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP
Sbjct: 401 GRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 460
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETLMRALEVLNYLGALDDDGNLT+ GE MSEFPLDPQM+KML+ SP++NCSNEILS+SAM
Sbjct: 461 ETLMRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAM 520
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVPNCF+RPREAQKAADEAKARFGHI+GDHLTLLNVYHA+KQNNEDP+WCY+NF+N+RA
Sbjct: 521 LSVPNCFIRPREAQKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRA 580
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
+KSADNVRQQLVRIM+RFNLK+CS DFNSRDYY+NIRKAMLAGYFMQVAHLERTG YLTV
Sbjct: 581 MKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTV 640
Query: 492 KDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQ 551
KDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTD+RGEWL+D+A HYYDLSNFP
Sbjct: 641 KDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPN 700
Query: 552 CEA 554
CEA
Sbjct: 701 CEA 703
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 2221 (786.9 bits), Expect = 3.3e-230, P = 3.3e-230
Identities = 413/544 (75%), Positives = 480/544 (88%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAM+DP+L++Y+VI+LDEAHERTLATD+L G+LKEV++ R DLKLVVMSA
Sbjct: 167 KYMTDGMLLREAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSA 226
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDIL 130
TL+A KFQ YF APLMKVPGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GDIL
Sbjct: 227 TLDAGKFQQYFDNAPLMKVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDIL 286
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
+FLTG+EEIE+AC++I +EI N+G ++G +K +PLYSTLPP +QQ+IFE
Sbjct: 287 MFLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAI 346
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLVSPISKASA QRSGR
Sbjct: 347 G-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGR 405
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PGKCFRLYTEK+F N++Q TYPEILRSNL VL LKKLGIDDLVHFDFMDPPA
Sbjct: 406 AGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPA 465
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PETLMRALE+LNYL ALDDDGNLT++G MSEFPLDPQ++KML+ S ++NCSNEILSI+A
Sbjct: 466 PETLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITA 525
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQ++EDP+WCY+NF+N R
Sbjct: 526 MLSVPQCFVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFR 585
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+LKSADNVRQQL RIM RFNL+ S +F S+DYYVNIRKA++ G+FMQVAHLERTG YLT
Sbjct: 586 SLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGYYLT 645
Query: 491 VKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFP 550
+KDNQ V LHPS CLDHKP+WVIYNE+VLT++N+IRTVTDV+ EWL +AP YYDL+NFP
Sbjct: 646 IKDNQNVQLHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQYYDLNNFP 705
Query: 551 QCEA 554
QCEA
Sbjct: 706 QCEA 709
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 2165 (767.2 bits), Expect = 2.8e-224, P = 2.8e-224
Identities = 401/544 (73%), Positives = 470/544 (86%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VMSA
Sbjct: 201 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSA 260
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GDIL 130
TL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD+L
Sbjct: 261 TLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 320
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
+FLTG+EEI++AC++I +EI ++G +VG +K++PLYSTLPP QQ+IFE
Sbjct: 321 LFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 380
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+GR
Sbjct: 381 G-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGR 439
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPA
Sbjct: 440 AGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPA 499
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI+A
Sbjct: 500 PETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 559
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N+R
Sbjct: 560 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 619
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG YLT
Sbjct: 620 SLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLT 679
Query: 491 VKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFP 550
VKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SNFP
Sbjct: 680 VKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFP 739
Query: 551 QCEA 554
QCEA
Sbjct: 740 QCEA 743
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 2164 (766.8 bits), Expect = 3.6e-224, P = 3.6e-224
Identities = 400/544 (73%), Positives = 470/544 (86%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VMSA
Sbjct: 234 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSA 293
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GDIL 130
TL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD+L
Sbjct: 294 TLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFE
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+GR
Sbjct: 414 G-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGR 472
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPA
Sbjct: 473 AGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPA 532
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI+A
Sbjct: 533 PETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 592
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N+R
Sbjct: 593 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 652
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG YLT
Sbjct: 653 SLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLT 712
Query: 491 VKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFP 550
VKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SNFP
Sbjct: 713 VKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFP 772
Query: 551 QCEA 554
QCEA
Sbjct: 773 QCEA 776
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 2164 (766.8 bits), Expect = 3.6e-224, P = 3.6e-224
Identities = 400/544 (73%), Positives = 470/544 (86%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VMSA
Sbjct: 234 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSA 293
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GDIL 130
TL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD+L
Sbjct: 294 TLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFE
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+GR
Sbjct: 414 G-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGR 472
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPA
Sbjct: 473 AGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPA 532
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI+A
Sbjct: 533 PETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 592
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N+R
Sbjct: 593 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 652
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG YLT
Sbjct: 653 SLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLT 712
Query: 491 VKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFP 550
VKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SNFP
Sbjct: 713 VKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFP 772
Query: 551 QCEA 554
QCEA
Sbjct: 773 QCEA 776
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 2164 (766.8 bits), Expect = 3.6e-224, P = 3.6e-224
Identities = 400/544 (73%), Positives = 470/544 (86%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VMSA
Sbjct: 234 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSA 293
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GDIL 130
TL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD+L
Sbjct: 294 TLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFE
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+GR
Sbjct: 414 G-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGR 472
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPA
Sbjct: 473 AGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPA 532
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI+A
Sbjct: 533 PETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 592
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N+R
Sbjct: 593 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 652
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG YLT
Sbjct: 653 SLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLT 712
Query: 491 VKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFP 550
VKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SNFP
Sbjct: 713 VKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFP 772
Query: 551 QCEA 554
QCEA
Sbjct: 773 QCEA 776
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 2164 (766.8 bits), Expect = 3.6e-224, P = 3.6e-224
Identities = 400/544 (73%), Positives = 470/544 (86%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VMSA
Sbjct: 234 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSA 293
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GDIL 130
TL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD+L
Sbjct: 294 TLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFE
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+GR
Sbjct: 414 G-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGR 472
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPA
Sbjct: 473 AGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPA 532
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI+A
Sbjct: 533 PETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 592
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N+R
Sbjct: 593 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 652
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG YLT
Sbjct: 653 SLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLT 712
Query: 491 VKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFP 550
VKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SNFP
Sbjct: 713 VKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFP 772
Query: 551 QCEA 554
QCEA
Sbjct: 773 QCEA 776
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 2164 (766.8 bits), Expect = 3.6e-224, P = 3.6e-224
Identities = 400/544 (73%), Positives = 470/544 (86%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VMSA
Sbjct: 234 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSA 293
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GDIL 130
TL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD+L
Sbjct: 294 TLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFE
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+GR
Sbjct: 414 G-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGR 472
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPA
Sbjct: 473 AGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPA 532
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI+A
Sbjct: 533 PETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 592
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N+R
Sbjct: 593 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 652
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG YLT
Sbjct: 653 SLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLT 712
Query: 491 VKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFP 550
VKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SNFP
Sbjct: 713 VKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFP 772
Query: 551 QCEA 554
QCEA
Sbjct: 773 QCEA 776
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 2164 (766.8 bits), Expect = 3.6e-224, P = 3.6e-224
Identities = 400/544 (73%), Positives = 470/544 (86%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VMSA
Sbjct: 234 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSA 293
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GDIL 130
TL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD+L
Sbjct: 294 TLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFE
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+GR
Sbjct: 414 G-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGR 472
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPA
Sbjct: 473 AGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPA 532
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI+A
Sbjct: 533 PETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 592
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N+R
Sbjct: 593 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 652
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG YLT
Sbjct: 653 SLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLT 712
Query: 491 VKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFP 550
VKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SNFP
Sbjct: 713 VKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFP 772
Query: 551 QCEA 554
QCEA
Sbjct: 773 QCEA 776
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 2142 (759.1 bits), Expect = 7.7e-222, P = 7.7e-222
Identities = 395/544 (72%), Positives = 469/544 (86%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VMSA
Sbjct: 208 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSA 267
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GDIL 130
TL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD+L
Sbjct: 268 TLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEDEGDVL 327
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
+FLTG+EEI++AC++I +EI ++G VG +K++PLYSTLPP QQ+IFE
Sbjct: 328 LFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAI 387
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+GR
Sbjct: 388 G-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGR 446
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPA
Sbjct: 447 AGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPA 506
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S +NCSNE+LSI+A
Sbjct: 507 PETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITA 566
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP CFVRP EA+KAADE+K RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N+R
Sbjct: 567 MLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 626
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+L SADNVRQQL RIM RFNL S +F SRDYY+NIR+A++ G+FMQVAHLERTG YLT
Sbjct: 627 SLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRALVTGFFMQVAHLERTGHYLT 686
Query: 491 VKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFP 550
VKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YY++SNFP
Sbjct: 687 VKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYEMSNFP 746
Query: 551 QCEA 554
QCEA
Sbjct: 747 QCEA 750
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 2049 (726.3 bits), Expect = 5.5e-212, P = 5.5e-212
Identities = 378/540 (70%), Positives = 455/540 (84%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y TDGMLLREAM PLL++YKV++LDEAHERTLATD+L GL+KE+++NR D+K+V+MSA
Sbjct: 178 KYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSA 237
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDIL 130
TL+A KFQ YF PL+ VPGR PVEIF+T E+DYLEAAIRTV+QIHM E GDIL
Sbjct: 238 TLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDIL 297
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
+FLTG+EEIE+AC++I +EI +G G + +PLYSTLPPA QQ+IFE
Sbjct: 298 LFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAI 357
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK V+STNIAETSLTIDG+V+VIDPGF+KQKVYNPR+RVESLLV PISKASA QR+GR
Sbjct: 358 S-RKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGR 416
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PGKCFRLYTE ++ +++Q QTYPEILRSNL + VL LKKLG +DLVHFDFMDPPA
Sbjct: 417 AGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPA 476
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PETLMRALE+LNYL A++DDG LTE+G M+EFPLDPQ++KML+ S + NCSNEILSI+A
Sbjct: 477 PETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITA 536
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP C+VRP E + ADEAKARF HIDGDHLTLLNVYH++KQN EDP WCYDNF+N+R
Sbjct: 537 MLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYR 596
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+K+AD VR QL R+M ++NL+ S DF SRDYY+NIRKA++AG+FMQVAHLER+G Y+T
Sbjct: 597 TMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVT 656
Query: 491 VKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFP 550
VKDNQ+V+LHPS LDHKPEW +YNE+VLT++NFIRTVTDVR EWL+ IAP YYDL NFP
Sbjct: 657 VKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFP 716
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 2049 (726.3 bits), Expect = 5.5e-212, P = 5.5e-212
Identities = 378/540 (70%), Positives = 455/540 (84%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y TDGMLLREAM PLL++YKV++LDEAHERTLATD+L GL+KE+++NR D+K+V+MSA
Sbjct: 178 KYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSA 237
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDIL 130
TL+A KFQ YF PL+ VPGR PVEIF+T E+DYLEAAIRTV+QIHM E GDIL
Sbjct: 238 TLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDIL 297
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
+FLTG+EEIE+AC++I +EI +G G + +PLYSTLPPA QQ+IFE
Sbjct: 298 LFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAI 357
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK V+STNIAETSLTIDG+V+VIDPGF+KQKVYNPR+RVESLLV PISKASA QR+GR
Sbjct: 358 S-RKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGR 416
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PGKCFRLYTE ++ +++Q QTYPEILRSNL + VL LKKLG +DLVHFDFMDPPA
Sbjct: 417 AGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPA 476
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PETLMRALE+LNYL A++DDG LTE+G M+EFPLDPQ++KML+ S + NCSNEILSI+A
Sbjct: 477 PETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITA 536
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP C+VRP E + ADEAKARF HIDGDHLTLLNVYH++KQN EDP WCYDNF+N+R
Sbjct: 537 MLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYR 596
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+K+AD VR QL R+M ++NL+ S DF SRDYY+NIRKA++AG+FMQVAHLER+G Y+T
Sbjct: 597 TMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVT 656
Query: 491 VKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFP 550
VKDNQ+V+LHPS LDHKPEW +YNE+VLT++NFIRTVTDVR EWL+ IAP YYDL NFP
Sbjct: 657 VKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFP 716
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 1904 (675.3 bits), Expect = 1.3e-196, P = 1.3e-196
Identities = 360/541 (66%), Positives = 443/541 (81%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAMTD +L RY I+LDEAHERTLATD+L GL+K + RPDLK++VMSA
Sbjct: 171 KYMTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSA 230
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A+KFQ YF+ APL+ VPGR +PVEI+YTQEPERDYLEAA+RTV+QIH+ E GDILV
Sbjct: 231 TLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILV 290
Query: 132 FLTGEEEIEDACRKITKEITNMGDQ--VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 189
FLTGEEEIEDACRKIT E ++ + GP+KV PLY +LPP QQ+IFE
Sbjct: 291 FLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGY 350
Query: 190 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 249
RK+V+STNIAETSLTIDGIVYV+DPGF+KQK+YNPR+RVESLLVSPISKASA QR+G
Sbjct: 351 G--RKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAG 408
Query: 250 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 309
RAGRT+PGKCFRLYTE++F +L QTYPEILRSNL++TVL LKKLGIDDLVHFD+MDPP
Sbjct: 409 RAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPP 468
Query: 310 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 369
APET+MRALE LNYL LDD+G+LT +G K SEFPLDP ++ ML+ SP++ CSNE+LS++
Sbjct: 469 APETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLT 528
Query: 370 AMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNH 429
A+LSVPN FVRP A+K ADE + +F H DGDHLTLLNVYHAYK WC+++F++H
Sbjct: 529 ALLSVPNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLSH 588
Query: 430 RALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQ-Y 488
RAL SADNVR+QL R M R ++L S F+ ++YYVNIR+A+++G+FMQVA G+ Y
Sbjct: 589 RALISADNVRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNY 648
Query: 489 LTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
+T+KDNQVV LHPS L PEWV+YNE+VLT+++FIR VT +R EWLI++AP+YYDL +
Sbjct: 649 VTMKDNQVVSLHPSCGLSVTPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDD 708
Query: 549 F 549
F
Sbjct: 709 F 709
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 1875 (665.1 bits), Expect = 1.5e-193, P = 1.5e-193
Identities = 364/547 (66%), Positives = 435/547 (79%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAM D L RY I+LDEAHERT++TDVL GLLKEV++ RPDLK+++MSA
Sbjct: 195 KYMTDGMLLREAMNDHELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRRPDLKIIIMSA 254
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A+KFQ YF APL+ VPGR HPVEIFYT EPE+DY+EAAIRTV+QIH E GDIL+
Sbjct: 255 TLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQIHATEDEGDILL 314
Query: 132 FLTGEEEIEDACRKITKEITNMGDQV--GPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 189
FLTGEEEIEDA RKI+ E M + GP+KV LY +LPP MQQ+IFE
Sbjct: 315 FLTGEEEIEDAARKISLEGDEMIREADAGPLKVYTLYGSLPPHMQQRIFEPAPPPRRPGG 374
Query: 190 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 249
RK++VSTNIAETSLTIDGIVYV+DPGF+KQK+YNPR+RVESLLVSPISKASA QR+G
Sbjct: 375 RPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAG 434
Query: 250 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 309
RAGRT+PGKCFRLYTE +F +L QTYPEILRSNL++TVL LKKLGIDDLVHFD MDPP
Sbjct: 435 RAGRTRPGKCFRLYTESAFKKELIDQTYPEILRSNLSSTVLELKKLGIDDLVHFDLMDPP 494
Query: 310 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 369
APETLMRALE LNYL LDDDGNLT +G SEFPLDP ++ ML+ SP++ CSNEILSI+
Sbjct: 495 APETLMRALEELNYLACLDDDGNLTPLGRLASEFPLDPALAVMLISSPEFYCSNEILSIT 554
Query: 370 AMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYK--QNNEDPS-WCYDNF 426
A+LSVP FVRP +K ADE K F H DGDHLTLLN YHA+K + E+P WC+D+F
Sbjct: 555 ALLSVPQIFVRPASQRKRADEMKNLFAHPDGDHLTLLNAYHAFKSPEAQENPKQWCHDHF 614
Query: 427 VNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTG 486
++ R+L+SADNVR QL+RIM R L++ S F + YY NIR+A+ AG+FMQVA E G
Sbjct: 615 LSLRSLQSADNVRMQLLRIMEREELEMISTSFEDKKYYENIRRALCAGFFMQVAKKENQG 674
Query: 487 Q--YLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
+ Y+T+KD+Q V LHPS L H EWV+YNE+VLT++N+IRTVT V+ EWLIDIAP YY
Sbjct: 675 KSMYMTIKDHQNVLLHPSTVLAHDAEWVLYNEFVLTTKNYIRTVTAVKPEWLIDIAPTYY 734
Query: 545 DLSNFPQ 551
D+S FP+
Sbjct: 735 DISTFPK 741
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 1859 (659.5 bits), Expect = 7.5e-192, P = 7.5e-192
Identities = 353/540 (65%), Positives = 433/540 (80%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+YLTDGMLLRE+M+DP L +Y VI+LDEAHERTL+TD+LFGL+K++LK R DLKL+VMSA
Sbjct: 172 KYLTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSA 231
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TLEA KFQ YF APL+KVPGRLHPVEIFYT+E +DYLE+A+RTV+ IH E +GDILV
Sbjct: 232 TLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILV 291
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTGEEEIED C KI +E G + P+K +PLYS+LP Q KIF+
Sbjct: 292 FLTGEEEIEDTCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFDTCKE-------- 341
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK +VSTNIAETSLTIDGIV+V+DPGF+KQK YNPR RVESLLV+PISKASA+QR+GRA
Sbjct: 342 -RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRA 400
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT+PGKCFRLYTEK+F + QT+PEILRSNLA+ VL L KLG+ DLVHFDFMDPP P
Sbjct: 401 GRTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVP 460
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+TL+RALEVL+YLGALDD+G LTE+G MSEFPLDPQ+SKML+ S + +CSNEIL+I+AM
Sbjct: 461 DTLIRALEVLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAM 520
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LS PNCF+RP++ + AD AK F H DGDHLT+LNVYH++K+N EDP+WCYDNF+NHRA
Sbjct: 521 LSAPNCFMRPKDNRIEADSAKKSFDHFDGDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRA 580
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
+K AD+VR QL RI+ RF L L S D NS+ YY NI+K + AG+FMQVA E+ Y T+
Sbjct: 581 IKQADSVRSQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTL 640
Query: 492 KDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQ 551
D Q V HPS L +PE+ IYNE+VLTS N+IRT+TDV+ +WL+++AP Y+ +FP+
Sbjct: 641 GDEQSVIFHPSTGLTRRPEFCIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPK 700
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 1821 (646.1 bits), Expect = 7.9e-188, P = 7.9e-188
Identities = 357/550 (64%), Positives = 437/550 (79%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAM D L RY I+LDEAHERTLATD+L GLLK+V+K RPDLK+++MSA
Sbjct: 189 KYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSA 248
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+AEKFQ YF APL+ VPGR +PVE++YT E +RDYL++AIRTV+QIH E +GDIL+
Sbjct: 249 TLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILL 308
Query: 132 FLTGEEEIEDACRKITKEITNMGDQV------GPVKVVPLYSTLPPAMQQKIFEXXXXXX 185
FLTGE+EIEDA RKI+ E GDQ+ GP+ V PLY +LPP QQ+IFE
Sbjct: 309 FLTGEDEIEDAVRKISLE----GDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESH 364
Query: 186 XXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAH 245
RK+V+STNIAETSLTIDGIVYV+DPGF+KQKVYNPR+RVESLLVSPISKASA
Sbjct: 365 NGRPG--RKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQ 422
Query: 246 QRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDF 305
QR+GRAGRT+PGKCFRLYTE++F +L Q+YPEILRSNL++TVL LKKLGIDDLVHFDF
Sbjct: 423 QRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDF 482
Query: 306 MDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEI 365
MDPPAPET+MRALE LNYL LDD+GNLT +G S+FPLDP ++ ML+ S ++ CS EI
Sbjct: 483 MDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEI 542
Query: 366 LSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP----SW 421
L+I AMLSVPN F+RP + +K AD+AK F H DGDH+TLLNVYHA+K + W
Sbjct: 543 LTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKW 602
Query: 422 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 481
C D+++N+R+L +ADN+R QL R+M R+NL+L + D+ S Y+ NIRKA+ +G+FMQVA
Sbjct: 603 CRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAK 662
Query: 482 LERTGQ--YLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 539
+R+G Y+TVKDNQ V +HPS L H EWVIYNE+VLTS+N+IRTVT VR EWLI+I
Sbjct: 663 -KRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEI 721
Query: 540 APHYYDLSNF 549
AP YYDLSNF
Sbjct: 722 APAYYDLSNF 731
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 1794 (636.6 bits), Expect = 5.8e-185, P = 5.8e-185
Identities = 354/548 (64%), Positives = 433/548 (79%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAM D L RY I+LDEAHERTLATD+L GLLK+V RPDLK+++MSA
Sbjct: 190 KYMTDGMLLREAMEDHDLTRYSCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMSA 249
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+AEKFQ YF APL+ VPGR HPVEI+YT E +RDYL+AAIRTV+QIH E GDIL+
Sbjct: 250 TLDAEKFQNYFNNAPLLAVPGRTHPVEIYYTPEFQRDYLDAAIRTVLQIHATEGEGDILL 309
Query: 132 FLTGEEEIEDACRKITKEITNM-GDQ-VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 189
FLTGEEEIEDACRKI+ E + +Q GP+KV PLY +LPP QQKIFE
Sbjct: 310 FLTGEEEIEDACRKISLEGDELVREQNCGPLKVYPLYGSLPPHQQQKIFEPAPTNPNPNG 369
Query: 190 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 249
RK+++STNIAETSLTIDGIVYV+DPGF+KQKVYNPRVRVESLLVSPISKASA QR+G
Sbjct: 370 RPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAG 429
Query: 250 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 309
RAGRT+PGKCFRLYTE++F +L Q+YPEILRSNL++TVL LKKLGIDDLVHFDFMDPP
Sbjct: 430 RAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPP 489
Query: 310 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 369
APET+MRALE LNYL L D+G+LT +G S+FPLDP ++ ML+ SP Y+CS EIL+I
Sbjct: 490 APETMMRALEELNYLQCLSDEGDLTALGRLASQFPLDPMLAVMLIGSPAYSCSEEILTIV 549
Query: 370 AMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAY--KQNNE--DPSWCYDN 425
AMLSVPN FVRP A+K ADEAK F DGDHLTL+NVY A+ + +E WC DN
Sbjct: 550 AMLSVPNVFVRPASARKRADEAKLSFAQADGDHLTLINVYEAFISPEASEIGTHKWCRDN 609
Query: 426 FVNHRALKSADNVRQQLVRIMARFNLKLCS--NDFNSRDYYVNIRKAMLAGYFMQVAHLE 483
F+++R+L SA NVR QL R+M +++L+L S N + +Y+ N++KA++AG+FMQVA +
Sbjct: 610 FLSYRSLTSAKNVRNQLQRLMQKYDLQLISQYNQVSEFEYWENVKKALVAGFFMQVAK-K 668
Query: 484 RTGQ--YLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAP 541
++G YLTVKDNQ V +HPS L + EW+IYNE+VLTS+N+IRTVT V+ EWL++IAP
Sbjct: 669 KSGNKGYLTVKDNQDVLIHPSTVLSKEGEWLIYNEFVLTSKNYIRTVTVVKPEWLVEIAP 728
Query: 542 HYYDLSNF 549
YY+L +F
Sbjct: 729 KYYNLDHF 736
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 1780 (631.7 bits), Expect = 1.8e-183, P = 1.8e-183
Identities = 337/550 (61%), Positives = 426/550 (77%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG LLRE + DP + RY I++DEAHERTLATD+L LLK++ R DLK+++MSA
Sbjct: 203 KYMTDGQLLRETIHDPNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSA 262
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A KFQ YF+ AP++ VPGR HPVEIFYT E ERDY+EA++RTV+QIH E GDIL+
Sbjct: 263 TLDAAKFQRYFFEAPILAVPGRTHPVEIFYTAEAERDYIEASVRTVLQIHATEAEGDILL 322
Query: 132 FLTGEEEIEDACRKITKEITNM-GD-QVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 189
FLTGEEEIED CRK+ E+ + D GP++V PLY TLPP QQKIF
Sbjct: 323 FLTGEEEIEDVCRKVRLEVDELIRDADCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKKGG 382
Query: 190 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 249
RK +V+TNIAETSLTIDGIVYV+DPGF+KQK+YN R+RVESLLV+PIS+ASA QR+G
Sbjct: 383 RPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQRAG 442
Query: 250 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 309
RAGRT+PGKCFRLYTE +F +L QTYPEILRSNL+NT+L LKKLG+DDLVHFDFMDPP
Sbjct: 443 RAGRTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLSNTILELKKLGVDDLVHFDFMDPP 502
Query: 310 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 369
APET+MRALE LNYL L+DDG+LT++G SE+PLDP ++ MLV SP++ CSNE+LS++
Sbjct: 503 APETMMRALEELNYLSCLNDDGDLTDLGHMASEYPLDPALAVMLVSSPEFYCSNEMLSVT 562
Query: 370 AMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYK----QNNEDPSWCYDN 425
++LSVP F+RP +K ADE K F H++GDHLTLLN YHA+K + + WC+++
Sbjct: 563 SLLSVPQVFMRPANNRKRADEMKEHFKHMEGDHLTLLNAYHAFKSEMAKGTDMKKWCHEH 622
Query: 426 FVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERT 485
F+++R L SADNVR QL IM R +L+L S F ++YY NIR+ ++AG+FMQVA E +
Sbjct: 623 FLSYRHLSSADNVRAQLKGIMERQDLELVSTPFTDKNYYTNIRRCLVAGFFMQVALRETS 682
Query: 486 GQ-YLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
G+ Y T+KDNQ V LHPS+ L EWV+Y+E+VLTS+ +IRTVT +R EWLIDIAP+YY
Sbjct: 683 GKVYHTIKDNQNVMLHPSSVLTTDYEWVLYHEFVLTSKQYIRTVTGIRPEWLIDIAPNYY 742
Query: 545 DLSNFPQCEA 554
DL NF +A
Sbjct: 743 DLDNFEDDQA 752
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 1474 (523.9 bits), Expect = 4.7e-151, P = 4.7e-151
Identities = 281/538 (52%), Positives = 395/538 (73%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+++TDG+LLRE + DP L Y VI+LDEAHERT++TDVLFGLLK+ L+ RP+LK+++ SA
Sbjct: 602 KFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSA 661
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TLEAEKF YF A L +PGR PV+I YT++PE DYL+A++ TV+QIH+ EP GDIL+
Sbjct: 662 TLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILL 721
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ AC+ + + + ++G V + ++P+YS LP MQ KIFE
Sbjct: 722 FLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGS------ 775
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YVIDPGF+KQK +NP+ ++SL+V+PIS+A+A QRSGRA
Sbjct: 776 -RKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRA 834
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE +F N++ + PEI R+NL NTVLT+K +GI+DL++FDFMDPP
Sbjct: 835 GRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPV 894
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+TL+ A+E L LGALD++G LT +G KM+EFPLDPQ+SKML+ S CS+EIL++ AM
Sbjct: 895 QTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAM 954
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP+E Q AD+ KA+F +GDHLTLLNVY ++K + WC++NFV R+
Sbjct: 955 LSVQNVFYRPKEKQALADQKKAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARS 1014
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
L+ A +VR+QL+ IM R+ L + S N Y I+KA+ +G+F + + Y T+
Sbjct: 1015 LRRAQDVRKQLITIMDRYKLDIISAGRN----YTKIQKAICSGFFANASKKDPNEGYKTL 1070
Query: 492 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
+ Q V++HPS+ L + P+WVIY+E V+T++ ++R V + +WL+++AP ++ S+
Sbjct: 1071 VEGQPVYIHPSSTLFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSD 1128
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 1469 (522.2 bits), Expect = 1.6e-150, P = 1.6e-150
Identities = 279/535 (52%), Positives = 386/535 (72%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGML+RE +T P L Y V+++DEAHERTL TD+LFGLLK++ + RPDLKL++ SA
Sbjct: 561 QYMTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSA 620
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++AE+F YF GAP +PGR + V YTQ PE DYL+AA+ TV+QIH+ EP GDILV
Sbjct: 621 TMDAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILV 680
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EE++ A + +G ++ + + +YSTLP +Q KIFE
Sbjct: 681 FLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNA------ 734
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI+YVIDPGF KQK++NPR +ESL+++P+S+ASA+QR GRA
Sbjct: 735 -RKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRA 793
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR PGKCFRL+T +F+N+L+ T PEI R+NL N VL LK +GI+DL++FDFMDPP
Sbjct: 794 GRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPA 853
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+TL+ ALE L LGAL+D G LT++G KM+EFP+DPQ+SKM++ S KY CS EIL+I AM
Sbjct: 854 QTLIAALEQLYALGALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAM 913
Query: 372 LSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
LSV N F RP++ AAD A+ F H GDHLTL+NV++ ++++ WC++NF+ HR
Sbjct: 914 LSVGNTIFYRPKDKAFAADAARKLFFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHR 973
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
++K A +VR QL ++ R + L SN + D +IRK + +G+F A LE++G + T
Sbjct: 974 SMKRAQDVRDQLELLLERVEIPLVSN-VDDTD---SIRKCIASGFFYNSAKLEKSGLFRT 1029
Query: 491 VKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
K NQ V +HPS+CL P+WV+Y+E VLT++ F+R + +++ WL +IAPH Y
Sbjct: 1030 TKHNQSVQIHPSSCLFQSPPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIY 1084
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 1467 (521.5 bits), Expect = 2.6e-150, P = 2.6e-150
Identities = 282/541 (52%), Positives = 391/541 (72%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + +P L Y V+++DEAHERTL+TD+LFGL+K++ + RPDLKL++ SA
Sbjct: 498 KYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSA 557
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++AEKF YF AP+ PGR +PVEI YT PE DY++AAI T++ IH+ EP GDILV
Sbjct: 558 TMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILV 617
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
F TG+EEIE A + I +G ++ + + P+Y+ LP +Q KIFE
Sbjct: 618 FFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGA------ 671
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF+K K YNPR +ESLL++PISKASA QR+GRA
Sbjct: 672 -RKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRA 730
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYT ++NNDL+ T PE+ R+NLA+ VL LK LGI DL++FDFMDPP
Sbjct: 731 GRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPA 790
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
E L+++LE+L LGAL+ G LT+ G +M+EFPLDP +SKM+V S KY CS+EI+SI+AM
Sbjct: 791 EALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAM 850
Query: 372 LSVP-NCFVRPREAQKAADEAKARF--GHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVN 428
LS+ + F RP++ Q AD A+ F G++ GDH+ LL VY ++K+ N WCY+N++
Sbjct: 851 LSIGGSIFYRPKDKQVHADNARMNFHTGNV-GDHIALLKVYSSWKETNFSTQWCYENYIQ 909
Query: 429 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 488
R++K A ++R QL ++ R + + SN N D ++RK+++AG+F A L++ G Y
Sbjct: 910 VRSMKRARDIRDQLEGLLERVEIDISSN-LNELD---SVRKSIVAGFFPHTAKLQKNGSY 965
Query: 489 LTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 547
TVK Q VH+HP++ L P WV+Y+E VLTS+ ++R VT+++ EWLI++APHYY L
Sbjct: 966 RTVKHPQTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLK 1025
Query: 548 N 548
+
Sbjct: 1026 D 1026
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 1446 (514.1 bits), Expect = 9.5e-150, Sum P(2) = 9.5e-150
Identities = 279/541 (51%), Positives = 390/541 (72%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + +P L Y VI++DEAHERTL TD+LFGL+K++ + RPDLKL++ SA
Sbjct: 498 KYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSA 557
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++AEKF +F AP+ + PGR +PV+I +T PE DY++AAI TV+ IH+ EP GD+LV
Sbjct: 558 TMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLV 617
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FL G+EEIE + +I +G ++ + + P+Y+ LP +Q KIFE
Sbjct: 618 FLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGA------ 671
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF+K K YNPR +ESLLV+PISKASA QR+GRA
Sbjct: 672 -RKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRA 730
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYT ++ NDL+ T PEI R+NLA+ VL+LK LGI +L++FDFMDPP
Sbjct: 731 GRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPS 790
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
E L+++LE+L LGAL+ G LT+ G +M+EFPLDP +SKM+V S KY CS+EI+SI+AM
Sbjct: 791 EALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAM 850
Query: 372 LSV-PNCFVRPREAQKAADEAKARFGHID--GDHLTLLNVYHAYKQNNEDPSWCYDNFVN 428
LS+ P+ F RP++ Q AD A F H+ GDH+ L +Y+++K+ N WCY+N++
Sbjct: 851 LSIGPSIFYRPKDKQVHADNAMKNF-HVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQ 909
Query: 429 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 488
R++K A ++R QL ++ R + + SN N D +IRK+++AG+F A L++ G Y
Sbjct: 910 VRSMKRARDIRDQLEGLLERVEIDVSSNA-NELD---SIRKSIVAGFFPHTAKLQKNGSY 965
Query: 489 LTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 547
TVK Q VH+HP++ L P WV+Y++ VLTS+ ++R VT+++ EWLI+IAPHYY L
Sbjct: 966 RTVKHPQTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLK 1025
Query: 548 N 548
+
Sbjct: 1026 D 1026
Score = 37 (18.1 bits), Expect = 9.5e-150, Sum P(2) = 9.5e-150
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 32 YKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL 64
Y + D E+T+ + G+L L PDL
Sbjct: 483 YSIRFEDCTSEKTILKYMTDGMLLRELLGEPDL 515
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 1458 (518.3 bits), Expect = 2.3e-149, P = 2.3e-149
Identities = 277/538 (51%), Positives = 390/538 (72%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + D L +Y VI+LDEAHERT+ TDVLFGLLK+++K R DL+L+V SA
Sbjct: 609 KYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSA 668
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+AEKF GYF+ + +PGR PVEI YT++PE DYL+AA+ TV+QIH+ EP GDILV
Sbjct: 669 TLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILV 728
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ AC+ + + + +G V + ++P+YS LP MQ +IF+
Sbjct: 729 FLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGK------ 782
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+VV+TNIAE SLTIDGI YV+DPGFAKQ VYNP+ +ESL+++PIS+ASA QR+GRA
Sbjct: 783 -RKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRA 841
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE ++ N++ P + PEI R NL T LT+K +GI+DL+ FDFMDPP P
Sbjct: 842 GRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQP 901
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+ L+ A+E L LGALD++G LT++G KM+EFPL+P +SKML+ S CS+EIL++ AM
Sbjct: 902 QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAM 961
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
+ N F RPRE Q AD+ +A+F +GDHLTLL VY A+K N WC++NF+ R+
Sbjct: 962 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRS 1021
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
L+ A +VR+QL+ IM ++ L + + N + IRKA+ AG+F A + Y T+
Sbjct: 1022 LRRAQDVRKQLLSIMDKYKLDVVTAGKN----FTKIRKAITAGFFFHGARKDPQEGYRTL 1077
Query: 492 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
+NQ V++HPS+ L +P+WVIY++ V+T++ ++R VT + +WL+++AP ++ +S+
Sbjct: 1078 VENQPVYIHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSD 1135
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 1449 (515.1 bits), Expect = 2.1e-148, P = 2.1e-148
Identities = 280/538 (52%), Positives = 391/538 (72%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + + L+ Y VI+LDEAHERT+ TDVLFGLLK ++ RP+LKL+V SA
Sbjct: 680 KYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSA 739
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A KF YF+ AP+ +PGR PVE+ YT+EPE DYL+A++ TV+QIH+ EP GDIL+
Sbjct: 740 TLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILL 799
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 800 FLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGS------ 853
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++SL+V+PIS+A+A QR+GRA
Sbjct: 854 -RKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRA 912
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGK +RLYTE+++ +++ P PEI R+NLA TVL LK +GI+DL+HFDFMD P
Sbjct: 913 GRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPV 972
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
E+L+ ALE L+ L ALDD+G LT +G +M+EFPL+P +SKML+ S CS+EIL+I +M
Sbjct: 973 ESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSM 1032
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N +WCY+NFV R
Sbjct: 1033 LSVQNVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRT 1092
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
LK + +VR+QL+ IM R L + S NS V I+KA+ +G+F A + Y T+
Sbjct: 1093 LKRSQDVRKQLLGIMDRHKLDVVSAGKNS----VRIQKAICSGFFRNAAKKDPQEGYRTL 1148
Query: 492 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
D+QVV++HPS+ L + +PEWVIY+E V T++ ++R VT + +WL++ AP ++ S+
Sbjct: 1149 VDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFSD 1206
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 1449 (515.1 bits), Expect = 2.1e-148, P = 2.1e-148
Identities = 275/542 (50%), Positives = 390/542 (71%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGML RE + DPLL +Y VI+LDEAHERT+ATDVLFGLLK + RPDLKL+V SA
Sbjct: 605 KYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSA 664
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+AE+F YFY P+ +PGR +PVEI YT++PE DYL+AA+ TV+QIH+ E GDILV
Sbjct: 665 TLDAERFSSYFYKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILV 724
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ +C + + +GD + + ++P+YS LP +Q +IFE
Sbjct: 725 FLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGG------ 778
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQ ++P++ ++SL+V+PIS+A A QRSGRA
Sbjct: 779 -RKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRA 837
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE ++ N++ P PEI R NL++T+L LK +GI+DL++FDFMDPP
Sbjct: 838 GRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPA 897
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+T++ AL+ L L ALDD+G LT +G KM++FP++PQ+SK+L+ S + CS E+LSI AM
Sbjct: 898 QTMIAALQNLYALSALDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAM 957
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVPN + RPRE Q+ AD +A+F + + DHLTLLNVY +K N +WCY++++ R
Sbjct: 958 LSVPNIWSRPREKQQEADRQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARG 1017
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLE-RTGQYLT 490
++ A++VR+QL+R+M R+ + S R+ I +A+ +GYF VA + G Y T
Sbjct: 1018 MRRAEDVRKQLIRLMDRYRHPVVSCG-RKREL---ILRALCSGYFTNVAKRDSHEGCYKT 1073
Query: 491 VKDNQVVHLHPSNCLDHKP-EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNF 549
+ +N V++HPS L K EWVIY+E + TS+ ++ TV+ V +WL+++AP ++ +N
Sbjct: 1074 IVENAPVYMHPSGVLFGKAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANA 1133
Query: 550 PQ 551
Q
Sbjct: 1134 NQ 1135
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 1442 (512.7 bits), Expect = 1.2e-147, P = 1.2e-147
Identities = 274/538 (50%), Positives = 390/538 (72%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SA
Sbjct: 669 KYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSA 728
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILV
Sbjct: 729 TLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILV 788
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 789 FLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------ 842
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRA
Sbjct: 843 -RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 901
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P
Sbjct: 902 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 961
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +M
Sbjct: 962 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1021
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+
Sbjct: 1022 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1081
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
L+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1082 LRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTL 1137
Query: 492 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1138 IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1195
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 1442 (512.7 bits), Expect = 1.2e-147, P = 1.2e-147
Identities = 274/538 (50%), Positives = 390/538 (72%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SA
Sbjct: 655 KYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSA 714
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILV
Sbjct: 715 TLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILV 774
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 775 FLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------ 828
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRA
Sbjct: 829 -RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 887
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P
Sbjct: 888 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 947
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +M
Sbjct: 948 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1007
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+
Sbjct: 1008 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1067
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
L+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1068 LRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTL 1123
Query: 492 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1124 IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1181
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 1442 (512.7 bits), Expect = 1.2e-147, P = 1.2e-147
Identities = 274/538 (50%), Positives = 390/538 (72%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SA
Sbjct: 659 KYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSA 718
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILV
Sbjct: 719 TLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILV 778
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 779 FLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------ 832
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRA
Sbjct: 833 -RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 891
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P
Sbjct: 892 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 951
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +M
Sbjct: 952 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1011
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+
Sbjct: 1012 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1071
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
L+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1072 LRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTL 1127
Query: 492 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1128 IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1185
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 1442 (512.7 bits), Expect = 1.2e-147, P = 1.2e-147
Identities = 274/538 (50%), Positives = 390/538 (72%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SA
Sbjct: 651 KYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSA 710
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILV
Sbjct: 711 TLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILV 770
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 771 FLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------ 824
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRA
Sbjct: 825 -RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 883
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P
Sbjct: 884 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 943
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +M
Sbjct: 944 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1003
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+
Sbjct: 1004 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1063
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
L+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1064 LRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTL 1119
Query: 492 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1120 IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1177
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 1442 (512.7 bits), Expect = 1.2e-147, P = 1.2e-147
Identities = 274/538 (50%), Positives = 390/538 (72%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SA
Sbjct: 683 KYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSA 742
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILV
Sbjct: 743 TLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILV 802
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 803 FLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------ 856
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRA
Sbjct: 857 -RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 915
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P
Sbjct: 916 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 975
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +M
Sbjct: 976 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1035
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+
Sbjct: 1036 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1095
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
L+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1096 LRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTL 1151
Query: 492 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1152 IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1209
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 1442 (512.7 bits), Expect = 1.2e-147, P = 1.2e-147
Identities = 274/538 (50%), Positives = 390/538 (72%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SA
Sbjct: 628 KYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSA 687
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILV
Sbjct: 688 TLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILV 747
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 748 FLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------ 801
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRA
Sbjct: 802 -RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 860
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P
Sbjct: 861 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 920
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +M
Sbjct: 921 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 980
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+
Sbjct: 981 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1040
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
L+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1041 LRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTL 1096
Query: 492 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1097 IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1154
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 1442 (512.7 bits), Expect = 1.2e-147, P = 1.2e-147
Identities = 274/538 (50%), Positives = 390/538 (72%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SA
Sbjct: 681 KYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSA 740
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILV
Sbjct: 741 TLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILV 800
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 801 FLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------ 854
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRA
Sbjct: 855 -RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 913
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P
Sbjct: 914 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 973
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +M
Sbjct: 974 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1033
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+
Sbjct: 1034 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1093
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
L+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1094 LRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTL 1149
Query: 492 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1150 IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1207
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 1439 (511.6 bits), Expect = 2.4e-147, P = 2.4e-147
Identities = 274/538 (50%), Positives = 389/538 (72%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SA
Sbjct: 607 KYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSA 666
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILV
Sbjct: 667 TLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILV 726
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 727 FLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------ 780
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRA
Sbjct: 781 -RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 839
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P
Sbjct: 840 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 899
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +M
Sbjct: 900 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 959
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+
Sbjct: 960 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1019
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
L+ A ++R+Q++ IM R L + S + V ++KA+ +G+F A + Y T+
Sbjct: 1020 LRRAQDIRKQMLGIMDRHKLDVVSCGKAT----VRVQKAICSGFFRNAAKKDPQEGYRTL 1075
Query: 492 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1076 IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1133
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 1435 (510.2 bits), Expect = 6.4e-147, P = 6.4e-147
Identities = 273/538 (50%), Positives = 389/538 (72%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SA
Sbjct: 649 KYMTDGMLLRECLIDPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSA 708
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A KF YFY AP+ +PGR +PVE+ YT+EPE DYL+A++ TV+QIH+ EP GDILV
Sbjct: 709 TLDAVKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILV 768
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 769 FLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------ 822
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRA
Sbjct: 823 -RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 881
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P
Sbjct: 882 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 941
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +M
Sbjct: 942 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1001
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+
Sbjct: 1002 LSVQNVFYRPKDKQALADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1061
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
L+ A ++R+Q++ IM R L + S + V ++KA+ +G+F A + Y T+
Sbjct: 1062 LRRAQDIRKQMLGIMDRHKLDVVSCGKAT----VRVQKAICSGFFRNAAKKDPQEGYRTL 1117
Query: 492 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1118 IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1175
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 1433 (509.5 bits), Expect = 1.0e-146, P = 1.0e-146
Identities = 273/536 (50%), Positives = 384/536 (71%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG L RE +++P L Y V+++DEAHERTL TD+LFGL+K++ + RP+LKL++ SA
Sbjct: 347 KYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSA 406
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+AEKF +F AP+ ++PGR +PV+IFYT+ PE DY++A +V+QIH +P GDILV
Sbjct: 407 TLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILV 466
Query: 132 FLTGEEEIEDACRKITKE-ITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
FLTG++EIE C+++ + + +G ++ + V+P+Y+ LP MQ KIFE
Sbjct: 467 FLTGQDEIE-TCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNA----- 520
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK++++TNIAETSLTID I+YVIDPGFAKQ +N R +ESL+V PISKASA+QR+GR
Sbjct: 521 --RKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGR 578
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT PGKCFRLYT ++ ++L+ T PEI R NL N VL LK LGI+DL+HFDF+DPP
Sbjct: 579 AGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPP 638
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
ETL+ ALE L LGAL+ G LT++G +M+EFP+DP M KML+ S KY CS E+++I+A
Sbjct: 639 HETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAA 698
Query: 371 MLSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNH 429
MLSV + F RP++ AD A+ F H+ GDHL+LL VY+ + + + WCY+NF+ +
Sbjct: 699 MLSVNSAIFYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQY 758
Query: 430 RALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
R++K A +VR+QLV +M R + + S VN+RKA AGYF VA L + G Y
Sbjct: 759 RSMKRARDVREQLVGLMQRVEIDMVS----CLPETVNVRKAATAGYFYHVARLSKGGHYK 814
Query: 490 TVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
T+K NQ V +HP++ L + P WV+Y+E V TS+ ++R V ++ +WL+++APHYY
Sbjct: 815 TIKHNQTVMIHPNSSLFEELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYY 870
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 1427 (507.4 bits), Expect = 4.5e-146, P = 4.5e-146
Identities = 270/537 (50%), Positives = 386/537 (71%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGML RE + DP L++Y VI+LDEAHERT+ATDVLFGLLK LK RPDL+L+V SA
Sbjct: 671 KYMTDGMLQREVLLDPDLKKYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSA 730
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A+KF YFYG P+ +PGR PVEI Y++EPE DYL+AA+ TV+QIH+ EP GD+L+
Sbjct: 731 TLDADKFSEYFYGCPIFSIPGRTFPVEIMYSKEPESDYLDAALITVMQIHLTEPPGDMLL 790
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ AC + + + +G V + ++P+YS LP MQ +IF+
Sbjct: 791 FLTGQEEIDTACEILYERMKALGPSVPELVILPVYSALPSEMQSRIFDPAPPGG------ 844
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETS+TID I YVIDPGF KQK Y+P++ ++SL+V+PIS+A A QR+GRA
Sbjct: 845 -RKVVIATNIAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRA 903
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKCFRLYTE ++ +++ P T P+I R NL++T+L LK +GI+DL+HFDFMDPP
Sbjct: 904 GRTGPGKCFRLYTEAAYQSEMLPTTIPDIQRQNLSHTILMLKAMGINDLLHFDFMDPPPT 963
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
T++ ALE L L ALDD+G LT +G KM++FP++P ++K+L+ S CS E+LSI AM
Sbjct: 964 NTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPALAKVLIASVDMGCSEEMLSIVAM 1023
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LS+ + F RP+E Q+ AD+ KA+F GDHLTLLNVY+A+K++ +WCY+NF+ R
Sbjct: 1024 LSIQSVFYRPKEKQQQADQKKAKFHDPHGDHLTLLNVYNAWKRSGFSNAWCYENFIQARQ 1083
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
++ A +VRQQL+ IM R++ K+ S N+ +R+A+ G+F A + Y T+
Sbjct: 1084 IRRAQDVRQQLLGIMQRYHHKIVSCGRNT----TKVRQALCTGFFRNSARKDPQEGYKTL 1139
Query: 492 KDNQVVHLHPSNCLDHKP-EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 547
+ V++HPS+ + KP E VIY+ VLT++ ++ T + +WL++ AP ++ ++
Sbjct: 1140 VEGTPVYMHPSSAMFGKPAEHVIYHTLVLTTKEYMHCTTGIEPKWLVEAAPTFFKVA 1196
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
Identities = 272/539 (50%), Positives = 383/539 (71%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGML RE + DP L+RY VI+LDEAHERT+ATDVLF LLK+ + RPDLK++V SA
Sbjct: 636 KYMTDGMLQREIVIDPDLKRYSVIMLDEAHERTIATDVLFALLKKATRRRPDLKIIVTSA 695
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A+KF YF P+ +PGR PVEI Y+++PE DYL+AA+ TV+QIH+ EP GDIL+
Sbjct: 696 TLDADKFSAYFNECPIFTIPGRTFPVEILYSKDPESDYLDAALTTVMQIHIDEPPGDILL 755
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ +C + + + +G V + ++P+YS LP MQ +IF+
Sbjct: 756 FLTGQEEIDTSCEILFERMKALGPSVPELIILPVYSALPNEMQSRIFDPAPPGS------ 809
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETS+TID I YV+DPGF KQ Y+P++ ++SL+V+PIS+A A+QR+GRA
Sbjct: 810 -RKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRA 868
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKCFRLYTE ++ ++ P + PEI R NL+NT+L LK +GI+DL+HFDFMDPP
Sbjct: 869 GRTGPGKCFRLYTEAAYQTEMLPTSIPEIQRQNLSNTILLLKAMGINDLLHFDFMDPPPI 928
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
T++ ALE L L ALDD+G LT +G KM++FP++P +SK+L+ S + CS+E+LSI AM
Sbjct: 929 NTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLSKVLIASVEMRCSDEMLSIVAM 988
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
L++PN F RP+E Q AD KA+F +GDHLTLLNVY+A+KQ+ WC +NF+ RA
Sbjct: 989 LNLPNVFYRPKEKQTQADAKKAKFHDPNGDHLTLLNVYNAWKQSRYSKPWCAENFIQFRA 1048
Query: 432 LKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
L A +VR Q+ RIM RF ++ C +D N +R+A+ +G+F A ++ Y
Sbjct: 1049 LTRARDVRNQIERIMQRFKYQVMSCGSDTN------RVRQALCSGFFRNAARKDQQEGYR 1102
Query: 490 TVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 547
T+ + V+LHPS+ L K EWVIY+ VLT++ ++ T + +WL+D AP ++ +S
Sbjct: 1103 TLIEGTPVYLHPSSALFGKHAEWVIYHTLVLTTKEYMHCTTSIEPKWLVDAAPTFFKVS 1161
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
Identities = 273/535 (51%), Positives = 380/535 (71%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE +T+P L Y VI++DEAHERTL TD+LFGL+K++ + RPDLK++V SA
Sbjct: 507 KYMTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLVASA 566
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+ E+F +F AP+ ++PGR PV+I+YT+ PE DYLEA + +V+QIH+ + GD+LV
Sbjct: 567 TLDTERFSSFFDDAPVFRIPGRRFPVDIYYTKAPEADYLEACVVSVLQIHVTQSPGDVLV 626
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEIE C + + +G ++ + V+P+Y+ LP MQ KIF
Sbjct: 627 FLTGQEEIEACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTPPGA------ 680
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+VV+TNIAETSLTIDGI+YVIDPGF KQK YN + +ESL+V+P S+ASA+QR+GRA
Sbjct: 681 -RKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGRA 739
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR GKCFRLYT +F ++++ T PEI R+NL N VL LK LGI+DL+HFDFMDPP
Sbjct: 740 GRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPH 799
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ ALE L LGAL+ G LT++G +M+E P+DP +SKM++ S +Y CS E+L+I+AM
Sbjct: 800 ETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILASEQYKCSEEVLTIAAM 859
Query: 372 LSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
LSV N F RP++ AD A+ F GDHL LLNVY + ++ WC++NF+ R
Sbjct: 860 LSVNNSIFYRPKDKVVHADNARMNFVVPGGDHLVLLNVYTQWVESGYSTQWCFENFIQFR 919
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
++K A +VR QL +M R ++LCS++ +S + IRKA+ AGYF A L + G Y T
Sbjct: 920 SMKRARDVRDQLEGLMDRIEVELCSSNGDS----MPIRKAVTAGYFYHTARLSKGG-YKT 974
Query: 491 VKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
VK Q V++HP++ L + +P W+IY+E V T++ F+R V ++ WL+++APHYY
Sbjct: 975 VKHQQTVYVHPNSSLFEEQPRWMIYHELVFTTKEFMRQVIEIESGWLLEVAPHYY 1029
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 1415 (503.2 bits), Expect = 8.4e-145, P = 8.4e-145
Identities = 268/538 (49%), Positives = 385/538 (71%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + DP L Y +I+LDEAHERT+ TDVLFGLLK + RP+LKL++ SA
Sbjct: 634 KYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSA 693
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL++ KF YF AP+ +PGR PVEI YT+EPE DYLEAA TV+QIH+ EP GD+LV
Sbjct: 694 TLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLV 753
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ +C + + + +MG V + ++P+Y LP MQ +IF+
Sbjct: 754 FLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGK------ 807
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQK+YNP+ ++SL+V+PIS+A+A QRSGRA
Sbjct: 808 -RKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRA 866
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE++F +++ P PEI R+NLA+T+L LK +GI++L+ FDFMD P
Sbjct: 867 GRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPL 926
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
++++ AL L+ L ALD DG LT++G +M+EFPL+P +SK+L+ S CS E+L+I AM
Sbjct: 927 DSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAM 986
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
L+V N F RP+E Q AD+ KA+F +GDHLTLL VY+++K ++ WC++NF+ R+
Sbjct: 987 LNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRS 1046
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
+K A ++R+QL+ IM R L + S RD ++KA+ +G+F A + Y T+
Sbjct: 1047 MKRAQDIRKQLLGIMDRHKLLMVSC---GRDVS-RVQKAICSGFFRNAAKRDPQEGYRTL 1102
Query: 492 KDNQVVHLHPSN-CLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
D Q V++HPS+ C +PEWV+Y+E V+T++ ++R VT + +WL++ AP ++ + +
Sbjct: 1103 TDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGD 1160
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 1415 (503.2 bits), Expect = 8.4e-145, P = 8.4e-145
Identities = 268/538 (49%), Positives = 385/538 (71%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + DP L Y +I+LDEAHERT+ TDVLFGLLK + RP+LKL++ SA
Sbjct: 634 KYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSA 693
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL++ KF YF AP+ +PGR PVEI YT+EPE DYLEAA TV+QIH+ EP GD+LV
Sbjct: 694 TLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLV 753
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ +C + + + +MG V + ++P+Y LP MQ +IF+
Sbjct: 754 FLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGK------ 807
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQK+YNP+ ++SL+V+PIS+A+A QRSGRA
Sbjct: 808 -RKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRA 866
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE++F +++ P PEI R+NLA+T+L LK +GI++L+ FDFMD P
Sbjct: 867 GRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPL 926
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
++++ AL L+ L ALD DG LT++G +M+EFPL+P +SK+L+ S CS E+L+I AM
Sbjct: 927 DSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAM 986
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
L+V N F RP+E Q AD+ KA+F +GDHLTLL VY+++K ++ WC++NF+ R+
Sbjct: 987 LNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRS 1046
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
+K A ++R+QL+ IM R L + S RD ++KA+ +G+F A + Y T+
Sbjct: 1047 MKRAQDIRKQLLGIMDRHKLLMVSC---GRDVS-RVQKAICSGFFRNAAKRDPQEGYRTL 1102
Query: 492 KDNQVVHLHPSN-CLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
D Q V++HPS+ C +PEWV+Y+E V+T++ ++R VT + +WL++ AP ++ + +
Sbjct: 1103 TDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGD 1160
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 1414 (502.8 bits), Expect = 1.1e-144, P = 1.1e-144
Identities = 275/537 (51%), Positives = 377/537 (70%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY+TDGMLLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SA
Sbjct: 498 RYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASA 557
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+ +F +F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILV
Sbjct: 558 TLDTARFSTFFDDAPIFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILV 617
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEIE AC + +G ++ + V+P+Y+ LP MQ +IF+
Sbjct: 618 FLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA------ 671
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+VV+TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRA
Sbjct: 672 -RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRA 730
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR GKCFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP
Sbjct: 731 GRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPY 790
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ ALE L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AM
Sbjct: 791 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 850
Query: 372 LSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
LSV N F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV R
Sbjct: 851 LSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFR 910
Query: 431 ALKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 488
+++ A +VR+QL ++ R + L C D Y+ +RKA+ AGYF A L R+G Y
Sbjct: 911 SMRRARDVREQLEGLLERVEVGLSSCQGD------YIRVRKAITAGYFYHTARLTRSG-Y 963
Query: 489 LTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
TVK Q V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 964 RTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1020
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 1413 (502.5 bits), Expect = 1.4e-144, P = 1.4e-144
Identities = 275/537 (51%), Positives = 377/537 (70%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY+TDGMLLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SA
Sbjct: 495 RYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASA 554
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+ +F +F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILV
Sbjct: 555 TLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILV 614
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEIE AC + +G ++ + V+P+Y+ LP MQ +IF+
Sbjct: 615 FLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA------ 668
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+VV+TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRA
Sbjct: 669 -RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRA 727
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR GKCFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP
Sbjct: 728 GRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPY 787
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ ALE L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AM
Sbjct: 788 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 847
Query: 372 LSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
LSV N F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV R
Sbjct: 848 LSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFR 907
Query: 431 ALKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 488
+++ A +VR+QL ++ R + L C D Y+ +RKA+ AGYF A L R+G Y
Sbjct: 908 SMRRARDVREQLEGLLERVEVGLSSCQGD------YIRVRKAITAGYFYHTARLTRSG-Y 960
Query: 489 LTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
TVK Q V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 961 RTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1017
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 1413 (502.5 bits), Expect = 1.4e-144, P = 1.4e-144
Identities = 275/537 (51%), Positives = 377/537 (70%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY+TDGMLLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SA
Sbjct: 498 RYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASA 557
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+ +F +F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILV
Sbjct: 558 TLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILV 617
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEIE AC + +G ++ + V+P+Y+ LP MQ +IF+
Sbjct: 618 FLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA------ 671
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+VV+TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRA
Sbjct: 672 -RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRA 730
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR GKCFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP
Sbjct: 731 GRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPY 790
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ ALE L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AM
Sbjct: 791 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 850
Query: 372 LSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
LSV N F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV R
Sbjct: 851 LSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFR 910
Query: 431 ALKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 488
+++ A +VR+QL ++ R + L C D Y+ +RKA+ AGYF A L R+G Y
Sbjct: 911 SMRRARDVREQLEGLLERVEVGLSSCQGD------YIRVRKAITAGYFYHTARLTRSG-Y 963
Query: 489 LTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
TVK Q V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 964 RTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1020
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 1413 (502.5 bits), Expect = 1.4e-144, P = 1.4e-144
Identities = 275/537 (51%), Positives = 377/537 (70%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY+TDGMLLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SA
Sbjct: 498 RYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASA 557
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+ +F +F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILV
Sbjct: 558 TLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILV 617
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEIE AC + +G ++ + V+P+Y+ LP MQ +IF+
Sbjct: 618 FLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA------ 671
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+VV+TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRA
Sbjct: 672 -RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRA 730
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR GKCFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP
Sbjct: 731 GRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPY 790
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ ALE L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AM
Sbjct: 791 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 850
Query: 372 LSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
LSV N F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV R
Sbjct: 851 LSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFR 910
Query: 431 ALKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 488
+++ A +VR+QL ++ R + L C D Y+ +RKA+ AGYF A L R+G Y
Sbjct: 911 SMRRARDVREQLEGLLERVEVGLSSCQGD------YIRVRKAITAGYFYHTARLTRSG-Y 963
Query: 489 LTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
TVK Q V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 964 RTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1020
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 1413 (502.5 bits), Expect = 1.4e-144, P = 1.4e-144
Identities = 275/537 (51%), Positives = 377/537 (70%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY+TDGMLLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SA
Sbjct: 497 RYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASA 556
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+ +F +F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILV
Sbjct: 557 TLDTARFSAFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILV 616
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEIE AC + +G ++ + V+P+Y+ LP MQ +IF+
Sbjct: 617 FLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA------ 670
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+VV+TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRA
Sbjct: 671 -RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRA 729
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR GKCFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP
Sbjct: 730 GRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPY 789
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ ALE L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AM
Sbjct: 790 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 849
Query: 372 LSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
LSV N F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV R
Sbjct: 850 LSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFR 909
Query: 431 ALKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 488
+++ A +VR+QL ++ R + L C D YV +RKA+ +GYF A L R+G Y
Sbjct: 910 SMRRARDVREQLEGLLERVEVGLTSCQGD------YVRVRKAITSGYFYHTARLTRSG-Y 962
Query: 489 LTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
TVK Q V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 963 RTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1019
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 1411 (501.8 bits), Expect = 2.2e-144, P = 2.2e-144
Identities = 274/537 (51%), Positives = 377/537 (70%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY+TDGMLLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SA
Sbjct: 494 RYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASA 553
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++ +F +F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILV
Sbjct: 554 TMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILV 613
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEIE AC + +G ++ + V+P+Y+ LP MQ +IF+
Sbjct: 614 FLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA------ 667
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+VV+TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRA
Sbjct: 668 -RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRA 726
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR GKCFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP
Sbjct: 727 GRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPY 786
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ ALE L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AM
Sbjct: 787 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 846
Query: 372 LSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
LSV N F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV R
Sbjct: 847 LSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFR 906
Query: 431 ALKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 488
+++ A +VR+QL ++ R + L C D Y+ +RKA+ AGYF A L R+G Y
Sbjct: 907 SMRRARDVREQLEGLLERVEVGLSSCQGD------YIRVRKAITAGYFYHTARLTRSG-Y 959
Query: 489 LTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
TVK Q V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 960 RTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1016
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 1403 (498.9 bits), Expect = 1.6e-143, P = 1.6e-143
Identities = 267/536 (49%), Positives = 377/536 (70%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGML REA+ DP + RY VI+LDEAHERT+ATDVLF LLK K P+LK++V SA
Sbjct: 434 KYMTDGMLEREALNDPNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSA 493
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL++ KF YF P++ +PGR PVE+ YT+ PE DYL AA+ +V+QIH+ EP+GDILV
Sbjct: 494 TLDSNKFSRYFNNCPIITIPGRTFPVEVLYTKAPEMDYLAAALESVIQIHVSEPAGDILV 553
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEIE +C + + + +G+ + + ++P+YS LP MQ +IFE
Sbjct: 554 FLTGQEEIETSCEALHERMKLLGENIPELIILPVYSALPSEMQTRIFEPTPPGS------ 607
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK++++TNIAETS+TIDGI YV+DPGF K +Y+ ++ ++SL V+PISKA A+QRSGRA
Sbjct: 608 -RKVILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGRA 666
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE+++ ++ P T PEI R NL++T+L LK +GI DLV+F+FMDPP+
Sbjct: 667 GRTGPGKCYRLYTEQAYEKEMIPNTIPEIQRQNLSHTILMLKAMGIHDLVNFEFMDPPST 726
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
T++ ALE L L ALDDDGNLT +G KM++ P++P ++K L++S +Y C+ EILSI AM
Sbjct: 727 TTMLTALEDLYILDALDDDGNLTTLGRKMADLPMEPALAKTLIQSVEYECTEEILSIVAM 786
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV F RP++ Q AD+ K+RF H GDHLTLLNV+ ++ +NN +WC DNF+ R+
Sbjct: 787 LSVQTIFYRPKDKQALADQRKSRFHHSLGDHLTLLNVFQSWCRNNYSKTWCRDNFIQERS 846
Query: 432 LKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
++ A VR+QL IM RF K C ND + +R+ +GYF A + Y
Sbjct: 847 MRRAMEVRKQLKSIMQRFGYKTMSCGNDVD------RVRRTFCSGYFKNSAKRQEGEGYK 900
Query: 490 TVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
T+ +N +V+LHPS+ L KP++VIY+ +LTS+ ++ V+ + WL ++AP Y+
Sbjct: 901 TLNENTLVYLHPSSSLYGKKPQYVIYHTLLLTSKEYMHCVSIIDPNWLYELAPKYF 956
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 1373 (488.4 bits), Expect = 3.8e-142, Sum P(2) = 3.8e-142
Identities = 272/536 (50%), Positives = 373/536 (69%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + +P L Y V+++DEAHERTL TD+LFGL+K++ + R DLKL++ SA
Sbjct: 459 KYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSA 518
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDIL 130
TL+AEKF +F AP+ ++PGR PV+I+YTQ PE DY++AAI T++QIH+ +P GDIL
Sbjct: 519 TLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDIL 578
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
VFLTG+EEIE + + +G ++ + +P+Y+ LP +Q KIFE
Sbjct: 579 VFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDA----- 633
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+V++TNIAETS+TIDGI YVIDPGF+KQ ++ R VE L V ISKA+A+QR+GR
Sbjct: 634 --RKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGR 691
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT PGKCFRLYT ++ ++L+ Q PEI R+NL N VL LK LGI DLVHFDF+DPP
Sbjct: 692 AGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPP 751
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
ETL+ ALE L LGAL+ G LT++G +M+EFP DP MSKM++ S KY CS EI++I+A
Sbjct: 752 QETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAA 811
Query: 371 MLSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNH 429
MLS F RP+ AD A+ F GDH+TL+NVY+ +++++ WC +N+V H
Sbjct: 812 MLSCNAAVFYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQH 871
Query: 430 RALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
R +K A +VR QLV ++ R ++ S S D + IRKA+ AGYF V+ L+ TG Y
Sbjct: 872 RTMKRARDVRDQLVGLLERVEIETKS----STDT-IKIRKAITAGYFYNVSKLDNTGHYK 926
Query: 490 TVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
TVK H HP++CL + P WV+Y E V TS+ F+R ++++ WL+++APHYY
Sbjct: 927 TVKHKHTTHPHPNSCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYY 982
Score = 38 (18.4 bits), Expect = 3.8e-142, Sum P(2) = 3.8e-142
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 32 YKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL 64
Y + D E+T+ + G+L N PDL
Sbjct: 444 YSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDL 476
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 1373 (488.4 bits), Expect = 3.8e-142, Sum P(2) = 3.8e-142
Identities = 272/536 (50%), Positives = 373/536 (69%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + +P L Y V+++DEAHERTL TD+LFGL+K++ + R DLKL++ SA
Sbjct: 459 KYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSA 518
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDIL 130
TL+AEKF +F AP+ ++PGR PV+I+YTQ PE DY++AAI T++QIH+ +P GDIL
Sbjct: 519 TLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDIL 578
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
VFLTG+EEIE + + +G ++ + +P+Y+ LP +Q KIFE
Sbjct: 579 VFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDA----- 633
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+V++TNIAETS+TIDGI YVIDPGF+KQ ++ R VE L V ISKA+A+QR+GR
Sbjct: 634 --RKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGR 691
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT PGKCFRLYT ++ ++L+ Q PEI R+NL N VL LK LGI DLVHFDF+DPP
Sbjct: 692 AGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPP 751
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
ETL+ ALE L LGAL+ G LT++G +M+EFP DP MSKM++ S KY CS EI++I+A
Sbjct: 752 QETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAA 811
Query: 371 MLSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNH 429
MLS F RP+ AD A+ F GDH+TL+NVY+ +++++ WC +N+V H
Sbjct: 812 MLSCNAAVFYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQH 871
Query: 430 RALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
R +K A +VR QLV ++ R ++ S S D + IRKA+ AGYF V+ L+ TG Y
Sbjct: 872 RTMKRARDVRDQLVGLLERVEIETKS----STDT-IKIRKAITAGYFYNVSKLDNTGHYK 926
Query: 490 TVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
TVK H HP++CL + P WV+Y E V TS+ F+R ++++ WL+++APHYY
Sbjct: 927 TVKHKHTTHPHPNSCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYY 982
Score = 38 (18.4 bits), Expect = 3.8e-142, Sum P(2) = 3.8e-142
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 32 YKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL 64
Y + D E+T+ + G+L N PDL
Sbjct: 444 YSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDL 476
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 1371 (487.7 bits), Expect = 3.9e-140, P = 3.9e-140
Identities = 266/545 (48%), Positives = 383/545 (70%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+YLTDGMLLRE +T+P L Y VI++DEAHERTL TD+LFGL+K++ + RPDLK+++ SA
Sbjct: 513 KYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSA 572
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++AEKF YF AP+ VPGR +PV+I+YT +PE +Y++AAI T++QIH +P+GDILV
Sbjct: 573 TIDAEKFSAYFDEAPVFYVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILV 632
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG++EIE + + +G ++ + + P+Y+ LP +Q KIF+
Sbjct: 633 FLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGA------ 686
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETS+TIDG+ +VID GF KQ +YNPR +ESL+ P S+ASA QR+GRA
Sbjct: 687 -RKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRA 745
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR PGKCFRLYT +++NN+L T PEI R+NL N VL LK LGI++L+ FDFMD P P
Sbjct: 746 GRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPP 805
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETLMR+LE+L LGAL++ G LT++G +M+EFP DP +SK L+ S KY C E+LSI +M
Sbjct: 806 ETLMRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSM 865
Query: 372 LS-VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
L + F RP++ AD+A+A F GDHLTLL++++ + + +W +NF+ ++
Sbjct: 866 LGEASSLFYRPKDKIMEADKARANFTQPGGDHLTLLHIWNEWVDTDFSYNWARENFLQYK 925
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQ-YL 489
+L A +VR QL + R ++L +N S D I+KA+ AGYF A L+R+G Y
Sbjct: 926 SLCRARDVRDQLANLCERVEIELVTNSSESLD---PIKKAITAGYFSNAARLDRSGDSYR 982
Query: 490 TVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
TVK NQ V++HPS+ + + KP+ +IY E VLT++ + R +T+++ EWL++I+PHY+ N
Sbjct: 983 TVKSNQTVYIHPSSSVAEKKPKVIIYFELVLTTKEYCRQITEIQPEWLLEISPHYFKPEN 1042
Query: 549 FPQCE 553
+ +
Sbjct: 1043 IEELQ 1047
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 1353 (481.3 bits), Expect = 6.3e-140, Sum P(2) = 6.3e-140
Identities = 267/537 (49%), Positives = 379/537 (70%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE +T+P L +Y +++DEAHERT+ TD+ GLLK++ K RPDLKL++ SA
Sbjct: 576 KYMTDGMLLRELLTEPDLGQYSALMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSA 635
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++A+KFQ YF AP+ +PGR++ V+I YTQ+PE +YL AAI TV QIH+ + GDILV
Sbjct: 636 TMDAQKFQSYFDNAPIFNIPGRMYNVDIHYTQQPEANYLAAAITTVFQIHVSQGPGDILV 695
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEIE A + + + +G+++ + + P+Y+ LP +Q KIFE
Sbjct: 696 FLTGQEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPPKA------ 749
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGIVYVIDPGF K+ V+NPR +ESL+V+P S+ASA+QR+GRA
Sbjct: 750 -RKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRA 808
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR PGKCFRLYT+ ++ N+L+ T PEI R+NL++ +L LK LGID L+ FDFMDPP
Sbjct: 809 GRVGPGKCFRLYTKWAYYNELEESTTPEIQRTNLSSVILMLKSLGIDQLLEFDFMDPPPA 868
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ET++RALE L LGAL+D G LT++G +M+EFP DP ++K ++ + K+ C E+LSI +M
Sbjct: 869 ETIIRALEQLYALGALNDRGELTKIGRQMAEFPTDPMLAKAILAADKHGCVEEVLSIVSM 928
Query: 372 LSVPNC-FVRPREAQKAADEAKARFGHIDG-DHLTLLNVYHAYKQNNEDPSWCYDNFVNH 429
L + F RP++ + AD A+ RF DG DHLTLLN+++ + ++ W +NF+
Sbjct: 929 LGEASALFFRPKDKKIHADSARNRFTVKDGGDHLTLLNIWNQWVDSDFSYVWAKENFLQQ 988
Query: 430 RALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQ-Y 488
R+L A +VR QL ++ R + + S N+ V I+KA+ AG+F A L+R G Y
Sbjct: 989 RSLTRARDVRDQLAKLCDRVEVTVSSCGSNN---IVPIQKAITAGFFPNAARLQRGGDSY 1045
Query: 489 LTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
T+K Q V+LHPS+ L + P WVIY E VLTS+ ++R+ ++ EWL+++APHYY
Sbjct: 1046 RTIKTGQTVYLHPSSTLFEVNPRWVIYFELVLTSKEYMRSNMPLQAEWLVEVAPHYY 1102
Score = 37 (18.1 bits), Expect = 6.3e-140, Sum P(2) = 6.3e-140
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 32 YKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL 64
Y + D ++T+ + G+L L PDL
Sbjct: 561 YSIRFEDNTSDKTVLKYMTDGMLLRELLTEPDL 593
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 1349 (479.9 bits), Expect = 8.3e-138, P = 8.3e-138
Identities = 262/515 (50%), Positives = 361/515 (70%)
Query: 34 VIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGR 93
V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SAT++ +F +F GAP+ ++PGR
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFRIPGR 94
Query: 94 LHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNM 153
PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EEIE AC + +
Sbjct: 95 RFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Query: 154 GDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVY 213
G ++ + V+P+Y+ LP MQ +IF+ RK+VV+TNIAETSLTI+GI+Y
Sbjct: 155 GSKIRELLVLPIYANLPSDMQARIFQPTPPGA-------RKVVVATNIAETSLTIEGIIY 207
Query: 214 VIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQ 273
V+DPGF KQK YNPR +ESL V+P SKASA+QR+GRAGR GKCFRLYT ++ ++L+
Sbjct: 208 VLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELE 267
Query: 274 PQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNL 333
T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ ALE L LGAL+ G L
Sbjct: 268 ETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGEL 327
Query: 334 TEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC-FVRPREAQKAADEAK 392
T G KM+E P+DP +SKM++ S KY+CS EIL+++AMLSV N F RP++ AD A+
Sbjct: 328 TTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNAR 387
Query: 393 ARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLK 452
F GDHL LLNVY + ++ WCY+NFV R+++ A +VR+QL ++ R +
Sbjct: 388 VNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVG 447
Query: 453 L--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL-DHKP 509
L C D Y+ +RKA+ AGYF A L R+G Y TVK Q V +HP++ L + +P
Sbjct: 448 LSSCQGD------YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQP 500
Query: 510 EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 501 RWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 535
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 1342 (477.5 bits), Expect = 4.6e-137, P = 4.6e-137
Identities = 261/515 (50%), Positives = 360/515 (69%)
Query: 34 VIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGR 93
V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SAT++ +F +F AP+ ++PGR
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGR 94
Query: 94 LHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNM 153
PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EEIE AC + +
Sbjct: 95 RFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Query: 154 GDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVY 213
G ++ + V+P+Y+ LP MQ +IF+ RK+VV+TNIAETSLTI+GI+Y
Sbjct: 155 GSKIRELLVLPIYANLPSDMQARIFQPTPPGA-------RKVVVATNIAETSLTIEGIIY 207
Query: 214 VIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQ 273
V+DPGF KQK YNPR +ESL V+P SKASA+QR+GRAGR GKCFRLYT ++ ++L+
Sbjct: 208 VLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELE 267
Query: 274 PQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNL 333
T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ ALE L LGAL+ G L
Sbjct: 268 ETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGEL 327
Query: 334 TEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC-FVRPREAQKAADEAK 392
T G KM+E P+DP +SKM++ S KY+CS EIL+++AMLSV N F RP++ AD A+
Sbjct: 328 TTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNAR 387
Query: 393 ARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLK 452
F GDHL LLNVY + ++ WCY+NFV R+++ A +VR+QL ++ R +
Sbjct: 388 VNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVG 447
Query: 453 L--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL-DHKP 509
L C D Y+ +RKA+ AGYF A L R+G Y TVK Q V +HP++ L + +P
Sbjct: 448 LSSCQGD------YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQP 500
Query: 510 EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 501 RWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 535
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 1341 (477.1 bits), Expect = 5.8e-137, P = 5.8e-137
Identities = 259/500 (51%), Positives = 362/500 (72%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SA
Sbjct: 659 KYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSA 718
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILV
Sbjct: 719 TLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILV 778
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 779 FLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------ 832
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRA
Sbjct: 833 -RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 891
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P
Sbjct: 892 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 951
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +M
Sbjct: 952 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1011
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+
Sbjct: 1012 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1071
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
L+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1072 LRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTL 1127
Query: 492 KDNQVVHLHPSNCL-DHKPE 510
D QVV++HPS+ L + +PE
Sbjct: 1128 IDQQVVYIHPSSALFNRQPE 1147
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 1341 (477.1 bits), Expect = 5.8e-137, P = 5.8e-137
Identities = 262/534 (49%), Positives = 362/534 (67%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGML REA+ DP + +Y VI+LDEAHERT+ATDVLF LLK+ RP+LK++V SA
Sbjct: 577 KYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSA 636
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL + KF YF P++ +PG+ PVE+ Y+Q P+ DY+EAA+ V+ IH+ E GDILV
Sbjct: 637 TLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILV 696
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG+EEI+ C + + +GD +G + ++P+YS LP +Q KIFE
Sbjct: 697 FLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGS------ 750
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V +TNIAETS+TIDGI YV+DPGFAK +YN R +E L+VSPIS+A A+QR GRA
Sbjct: 751 -RKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRA 809
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE +F N++ T PEI R NL++T+L LK +GI+DL+ FDFMDPP
Sbjct: 810 GRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPK 869
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
++ AL L +L +LDD+G LT +G++MS FP+DP +S+ L+ S CS+EI++I +M
Sbjct: 870 NLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISM 929
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP++ Q AD KA+F H GDHLTLLNVY ++Q N +C NF++ R
Sbjct: 930 LSVQNVFYRPKDRQLEADSKKAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRH 989
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
LK A +V+ Q+ I + LKL S + D IRK ++G+FM A + Y T+
Sbjct: 990 LKRARDVKSQISMIFKKIGLKLISCH-SDPDL---IRKTFVSGFFMNAAKRDSQVGYKTI 1045
Query: 492 KDNQVVHLHPSNCLDHKP-EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
V +HPS+ L K E+V+Y+ VLTSR ++ VT + +WL+++APH+Y
Sbjct: 1046 NGGTEVGIHPSSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFY 1099
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 1337 (475.7 bits), Expect = 1.5e-136, P = 1.5e-136
Identities = 259/536 (48%), Positives = 379/536 (70%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+YLTDGMLLRE ++D LL +Y I+LDEAHERT++TD+LF LLK+V++ R D KL+V SA
Sbjct: 725 KYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSA 784
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+AEKF YF+ +P+ +PG++ PVEI +++EPE DY+EA++ TV+ IH+ E GDILV
Sbjct: 785 TLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILV 844
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVV-PLYSTLPPAMQQKIFEXXXXXXXXXXX 190
FLTG++EI AC + + + + P ++ P+YS+LP MQ IFE
Sbjct: 845 FLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGC----- 899
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK +++TNIAE SLTIDGI +VIDPGF K K Y+ + ++SL+V+PISKA+A QR+GR
Sbjct: 900 --RKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGR 957
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT PGKC+RLYTE+++ N++ + PEI R NL + VL LK LGI+D +HFDFMD P+
Sbjct: 958 AGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPS 1017
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
ETL+ +LE L YLGALDD+G LT++G+KM+ FP++P +SK+L+ S +NC++++++I +
Sbjct: 1018 VETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTIVS 1077
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSV N F RP+ AD+ K +F GD +T LN+Y+ +K+N+ WC++NF+ R
Sbjct: 1078 MLSVQNIFYRPQNKALLADKKKNKFIMPQGDLITYLNIYNKWKENSFSNYWCHENFIQSR 1137
Query: 431 ALKSADNVRQQLVRIMARFNLKLC-SNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
ALK A +VR+Q++ I ++N ++ S N YVNI K++ +GYF V + Y
Sbjct: 1138 ALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDATKYVNICKSICSGYFNHVCKRDTQQGYT 1197
Query: 490 TVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
T+ NQ V +HPS+ L +K P +V+Y+E VLT++ +IR T ++ +WLI +AP+ +
Sbjct: 1198 TLLTNQQVFIHPSSTLFNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLF 1253
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 1337 (475.7 bits), Expect = 1.5e-136, P = 1.5e-136
Identities = 259/536 (48%), Positives = 379/536 (70%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+YLTDGMLLRE ++D LL +Y I+LDEAHERT++TD+LF LLK+V++ R D KL+V SA
Sbjct: 725 KYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSA 784
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+AEKF YF+ +P+ +PG++ PVEI +++EPE DY+EA++ TV+ IH+ E GDILV
Sbjct: 785 TLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILV 844
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVV-PLYSTLPPAMQQKIFEXXXXXXXXXXX 190
FLTG++EI AC + + + + P ++ P+YS+LP MQ IFE
Sbjct: 845 FLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGC----- 899
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK +++TNIAE SLTIDGI +VIDPGF K K Y+ + ++SL+V+PISKA+A QR+GR
Sbjct: 900 --RKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGR 957
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT PGKC+RLYTE+++ N++ + PEI R NL + VL LK LGI+D +HFDFMD P+
Sbjct: 958 AGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPS 1017
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
ETL+ +LE L YLGALDD+G LT++G+KM+ FP++P +SK+L+ S +NC++++++I +
Sbjct: 1018 VETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTIVS 1077
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSV N F RP+ AD+ K +F GD +T LN+Y+ +K+N+ WC++NF+ R
Sbjct: 1078 MLSVQNIFYRPQNKALLADKKKNKFIMPQGDLITYLNIYNKWKENSFSNYWCHENFIQSR 1137
Query: 431 ALKSADNVRQQLVRIMARFNLKLC-SNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
ALK A +VR+Q++ I ++N ++ S N YVNI K++ +GYF V + Y
Sbjct: 1138 ALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDATKYVNICKSICSGYFNHVCKRDTQQGYT 1197
Query: 490 TVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
T+ NQ V +HPS+ L +K P +V+Y+E VLT++ +IR T ++ +WLI +AP+ +
Sbjct: 1198 TLLTNQQVFIHPSSTLFNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLF 1253
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 1277 (454.6 bits), Expect = 3.5e-130, P = 3.5e-130
Identities = 236/538 (43%), Positives = 372/538 (69%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE+ DP L++Y I++DEAHER+L TDVLFG+LK+V+ R D+KL+V SA
Sbjct: 753 KYMTDGILLRESFNDPNLDKYSAIIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSA 812
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++++KF +F P+ +PGR PV++ +++ P DY+++A++ ++ IH+ + GDILV
Sbjct: 813 TMDSKKFSMFFGDVPVFTIPGRTFPVDVLWSKTPCEDYVDSAVKQILSIHVTQGVGDILV 872
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
F+TG+E+IE C + + I +G Q P+ ++P+YS LP MQ KIFE
Sbjct: 873 FMTGQEDIETTCATVEERIKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGS------ 926
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK +++TNIAETSLT+DGI+YVID G+ K KVYNPRV ++SL V+PISKA+A+QRSGRA
Sbjct: 927 -RKCIIATNIAETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVTPISKANANQRSGRA 985
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PG+C+RLYTE +F +L PEI R+NL N VL LK +G+ +L+ FDFMDPP
Sbjct: 986 GRTGPGRCYRLYTESAFKYELMDNNIPEIQRTNLGNVVLNLKSMGVKNLLDFDFMDPPPQ 1045
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+ ++ ++ L LGALDD G +T +G++MSEFPLDP +SKM++ + + C +I++I +M
Sbjct: 1046 DNILNSMYQLWVLGALDDQGQITPLGKRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVSM 1105
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LS+P+ F RP+ A++ +D ++ +F + DHLTLL+VY +K NN WC +++++ +A
Sbjct: 1106 LSMPSVFYRPKGAEEESDASREKFFVPESDHLTLLHVYQQWKINNYSSQWCAEHYIHIKA 1165
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
++ VR QL+ IM + ++K+ S N + IRKA+ + YF A ++ G+Y+ +
Sbjct: 1166 MRKVREVRGQLLDIMVQHDMKVESCGSN----WDIIRKAITSSYFHHSAKIKGIGEYVNM 1221
Query: 492 KDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 546
++ LHP++ L + P++++Y+E V+TS+ +++ VT V WL ++ P ++ +
Sbjct: 1222 RNGMPCFLHPTSALYGLGYAPDYIVYHELVMTSKEYMQIVTAVDPNWLAEMGPMFFSI 1279
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 1272 (452.8 bits), Expect = 1.2e-129, P = 1.2e-129
Identities = 249/544 (45%), Positives = 362/544 (66%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE + D L++Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SA
Sbjct: 535 KYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSA 594
Query: 72 TLEAEKFQGYFYG-APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDIL 130
T++A+KF +F G P +PGR PVE+F+ + P DY++AA++ V IH+ GDIL
Sbjct: 595 TMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDIL 654
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
+F+ G+E+IE C I +++ + D+ P+ V+P+YS LP +Q KIF+
Sbjct: 655 IFMPGQEDIECTCEMIKEKLGEL-DEAPPLAVLPIYSQLPSDLQAKIFQRAPGGM----- 708
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK +V+TNIAETSLT+DGI++VIDPGF K KVYNPR+ +++L + P+S+ASA+QR+GR
Sbjct: 709 --RKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGR 766
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT PG+C+RLYTE+ F ++L T PEI R+NLAN VL LK LG+DDL+ F FMD P
Sbjct: 767 AGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPP 826
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
+ ++ ++ L LGALD+ G LT MG KM EFPLDP +SKML+ S + CS+E+L+I +
Sbjct: 827 QDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVS 886
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP F RP+ ++ AD K +F + DHLT LNVY ++ + WC DN+++ +
Sbjct: 887 MLSVPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVK 946
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
ALK VR QL IM L L SN ++ + +RK + + YF A L+ G+Y+
Sbjct: 947 ALKKVREVRAQLKEIMQDLKLPLISN---GSEWDI-VRKCICSAYFHNAARLKGIGEYVN 1002
Query: 491 VKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 547
V+ LHP++ L P++V+Y+E ++T++ +++ VT V WL ++ P +Y +
Sbjct: 1003 VRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIK 1062
Query: 548 NFPQ 551
Q
Sbjct: 1063 ESKQ 1066
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 1272 (452.8 bits), Expect = 1.2e-129, P = 1.2e-129
Identities = 249/544 (45%), Positives = 362/544 (66%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE + D L++Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SA
Sbjct: 535 KYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSA 594
Query: 72 TLEAEKFQGYFYG-APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDIL 130
T++A+KF +F G P +PGR PVE+F+ + P DY++AA++ V IH+ GDIL
Sbjct: 595 TMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDIL 654
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
+F+ G+E+IE C I +++ + D+ P+ V+P+YS LP +Q KIF+
Sbjct: 655 IFMPGQEDIECTCEMIKEKLGEL-DEAPPLAVLPIYSQLPSDLQAKIFQRAPGGM----- 708
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK +V+TNIAETSLT+DGI++VIDPGF K KVYNPR+ +++L + P+S+ASA+QR+GR
Sbjct: 709 --RKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGR 766
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT PG+C+RLYTE+ F ++L T PEI R+NLAN VL LK LG+DDL+ F FMD P
Sbjct: 767 AGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPP 826
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
+ ++ ++ L LGALD+ G LT MG KM EFPLDP +SKML+ S + CS+E+L+I +
Sbjct: 827 QDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVS 886
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP F RP+ ++ AD K +F + DHLT LNVY ++ + WC DN+++ +
Sbjct: 887 MLSVPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVK 946
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
ALK VR QL IM L L SN ++ + +RK + + YF A L+ G+Y+
Sbjct: 947 ALKKVREVRAQLKEIMQDLKLPLISN---GSEWDI-VRKCICSAYFHNAARLKGIGEYVN 1002
Query: 491 VKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 547
V+ LHP++ L P++V+Y+E ++T++ +++ VT V WL ++ P +Y +
Sbjct: 1003 VRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIK 1062
Query: 548 NFPQ 551
Q
Sbjct: 1063 ESKQ 1066
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 1262 (449.3 bits), Expect = 1.4e-128, P = 1.4e-128
Identities = 243/540 (45%), Positives = 362/540 (67%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ + L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SA
Sbjct: 626 KYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSA 685
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++AEKF +F P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+
Sbjct: 686 TMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILI 745
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
F+ G+E+IE +I + + + + + V+P+YS LP +Q KIF+
Sbjct: 746 FMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV------ 798
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK +V+TNIAETSLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRA
Sbjct: 799 -RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRA 857
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PG+CFRLYT+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP
Sbjct: 858 GRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPE 917
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+ ++ ++ L LGALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +M
Sbjct: 918 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 977
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVP F RP+ ++ +D+ + +F + DHLT LNVY +K NN WC D+F++ +A
Sbjct: 978 LSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKA 1037
Query: 432 LKSADNVRQQLVRIMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
++ VR QL IM R +L C D++ +RK + A YF Q A L+ G+Y+
Sbjct: 1038 MRKVREVRAQLKDIMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYV 1091
Query: 490 TVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 546
++ HLHP++ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 1092 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1151
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 1262 (449.3 bits), Expect = 1.4e-128, P = 1.4e-128
Identities = 243/540 (45%), Positives = 362/540 (67%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ + L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SA
Sbjct: 165 KYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSA 224
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++AEKF +F P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+
Sbjct: 225 TMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILI 284
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
F+ G+E+IE +I + + + + + V+P+YS LP +Q KIF+
Sbjct: 285 FMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV------ 337
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK +V+TNIAETSLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRA
Sbjct: 338 -RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRA 396
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PG+CFRLYT+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP
Sbjct: 397 GRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPE 456
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+ ++ ++ L LGALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +M
Sbjct: 457 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 516
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVP F RP+ ++ +D+ + +F + DHLT LNVY +K NN WC D+F++ +A
Sbjct: 517 LSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKA 576
Query: 432 LKSADNVRQQLVRIMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
++ VR QL IM R +L C D++ +RK + A YF Q A L+ G+Y+
Sbjct: 577 MRKVREVRAQLKDIMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYV 630
Query: 490 TVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 546
++ HLHP++ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 631 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 690
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 1261 (449.0 bits), Expect = 1.7e-128, P = 1.7e-128
Identities = 242/540 (44%), Positives = 362/540 (67%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ + L+ Y +++DEAHER+L TDVLFGLL+EV+ R DLKL+V SA
Sbjct: 625 KYMTDGILLRESLREADLDHYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSA 684
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++AEKF +F P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+
Sbjct: 685 TMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILI 744
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
F+ G+E+IE +I + + + + + V+P+YS LP +Q KIF+
Sbjct: 745 FMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV------ 797
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK +V+TNIAETSLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRA
Sbjct: 798 -RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRA 856
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PG+CFRLYT+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP
Sbjct: 857 GRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPE 916
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+ ++ ++ L LGALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +M
Sbjct: 917 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 976
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVP F RP+ ++ +D+ + +F + DHLT LNVY +K NN WC D+F++ +A
Sbjct: 977 LSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKA 1036
Query: 432 LKSADNVRQQLVRIMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
++ VR QL IM R +L C D++ +RK + A YF Q A L+ G+Y+
Sbjct: 1037 MRKVREVRAQLKDIMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYV 1090
Query: 490 TVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 546
++ HLHP++ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 1091 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1150
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 1259 (448.2 bits), Expect = 2.8e-128, P = 2.8e-128
Identities = 242/540 (44%), Positives = 362/540 (67%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ + L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SA
Sbjct: 627 KYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSA 686
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++A+KF +F P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+
Sbjct: 687 TMDADKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILI 746
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
F+ G+E+IE +I + + + + + V+P+YS LP +Q KIF+
Sbjct: 747 FMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV------ 799
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK +V+TNIAETSLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRA
Sbjct: 800 -RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRA 858
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PG+CFRLYT+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP
Sbjct: 859 GRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPE 918
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+ ++ ++ L LGALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +M
Sbjct: 919 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 978
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVP F RP+ ++ +D+ + +F + DHLT LNVY +K NN WC D+F++ +A
Sbjct: 979 LSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKA 1038
Query: 432 LKSADNVRQQLVRIMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
++ VR QL IM R +L C D++ +RK + A YF Q A L+ G+Y+
Sbjct: 1039 MRKVREVRAQLKDIMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYV 1092
Query: 490 TVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 546
++ HLHP++ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 1093 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1152
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 1258 (447.9 bits), Expect = 3.6e-128, P = 3.6e-128
Identities = 242/540 (44%), Positives = 362/540 (67%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ + L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SA
Sbjct: 626 KYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSA 685
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++AEKF +F P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+
Sbjct: 686 TMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILI 745
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
F+ G+E+IE +I + + + + + V+P+YS LP +Q KIF+
Sbjct: 746 FMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV------ 798
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK +V+TNIAETSLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRA
Sbjct: 799 -RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRA 857
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PG+CFRLYT+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP
Sbjct: 858 GRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPE 917
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+ ++ ++ L LGALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +M
Sbjct: 918 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 977
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVP F RP+ ++ +D+ + +F + DHL+ LNVY +K NN WC D+F++ +A
Sbjct: 978 LSVPAIFYRPKGREEESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKA 1037
Query: 432 LKSADNVRQQLVRIMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
++ VR QL IM R +L C D++ +RK + A YF Q A L+ G+Y+
Sbjct: 1038 MRKVREVRAQLKDIMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYV 1091
Query: 490 TVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 546
++ HLHP++ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 1092 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1151
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 1258 (447.9 bits), Expect = 3.6e-128, P = 3.6e-128
Identities = 253/550 (46%), Positives = 364/550 (66%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE MT+P L Y +++DEAHERT+ TD+L L+K++ + R DLKL++ SA
Sbjct: 468 KYMTDGMLLREFMTEPDLSSYSALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSA 527
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T+ AEKF YF AP+ +PGR +PV+I+YT PE +YL AAI TV QIH +P GDIL+
Sbjct: 528 TMNAEKFASYFDDAPIFNIPGRRYPVDIYYTPAPEANYLSAAITTVFQIHTTQPKGDILI 587
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FLTG++EIE A +IT+ +G +V + + P+Y+ LP +Q KIFE
Sbjct: 588 FLTGQDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQSKIFEPTPENA------ 641
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGIVYVIDPG+ K+ VYNP + +L+V P S+ASA+QRSGRA
Sbjct: 642 -RKVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRA 700
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR PGKCFRLYT+ ++ N+++ T PEI R+NL VL LK LGI++L+ F+FMDPP
Sbjct: 701 GRVGPGKCFRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPT 760
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
E L+ AL L L L+ G LT++G +M+EFP DP ++K ++ + K C E+LSI AM
Sbjct: 761 EALIGALNQLFALQGLNHKGELTKLGRQMAEFPTDPMLAKAVLAADKEGCVEEVLSIVAM 820
Query: 372 LSVPNC-FVRPREAQKAADEAKARFGHIDG-DHLTLLNVYHAYKQNNEDPSWCYDNFVNH 429
LS + F RP++ Q AD A+ RF +G DH+TLLN+++ + ++ P W +NF+
Sbjct: 821 LSEASALFFRPKDKQVHADAARGRFTVKEGGDHVTLLNIWNQWLDSDYSPIWSKENFLQQ 880
Query: 430 RALKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQ 487
R+L A +VR+QL ++ R + L C N I++A+ AG+F A ++R+G
Sbjct: 881 RSLTRARDVREQLSKLCERVEVTLSTCGGISNMPP----IKRAITAGFFPNAARMQRSGD 936
Query: 488 -YLTVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 543
Y TVK+N V++HPS+ + D P VIY E V T++ ++R+ + +WL ++APH+
Sbjct: 937 SYRTVKNNTTVYIHPSSVMMQEDPPPRMVIYYELVQTTKEYMRSCMPIEPKWLAELAPHF 996
Query: 544 YDLSNFPQCE 553
+ + E
Sbjct: 997 HKAKDIAALE 1006
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 1254 (446.5 bits), Expect = 9.6e-128, P = 9.6e-128
Identities = 241/542 (44%), Positives = 366/542 (67%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ + L+ Y +++DEAHER+L TDVLFGLL+EV+ R DLKL+V SA
Sbjct: 657 KYMTDGILLRESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSA 716
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++++KF +F P+ +PGR PV+I +++ P+ DY+EAA++ +QIH+ GDIL+
Sbjct: 717 TMDSDKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGMVGDILI 776
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
F+ G+E+IE +I + + ++ + + V+P+YS LP +Q KIF+
Sbjct: 777 FMPGQEDIEVTSDQIVERLADL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV------ 829
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK +V+TNIAETSLT+DGI++V+D G+ K KV+NPR+ +++L V PIS+A+A+QR+GRA
Sbjct: 830 -RKCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRA 888
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PG+C+RLYT+ +F N++ T PEI R+NLAN VL LK LG+ DL+ F FMDPP
Sbjct: 889 GRTGPGQCYRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPE 948
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+ ++ ++ L LGALD+ G LT G M EFPLDP +SKML+ S +CS +IL I +M
Sbjct: 949 DNMLNSMYQLWILGALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSM 1008
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVP+ F RP+ ++ +D+ + +F + DHLT LNVY +K NN WC D+F++ +A
Sbjct: 1009 LSVPSIFYRPKGREEESDQVREKFSVPESDHLTYLNVYLQWKNNNYSSIWCNDHFIHTKA 1068
Query: 432 LKSADNVRQQLVRIMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
++ VR QL IM + NL C +D++ IRK + A YF Q A L+ G+Y+
Sbjct: 1069 MRKVREVRAQLKDIMVQQKMNLISCGSDWDV------IRKCICAAYFHQAAKLKGIGEYV 1122
Query: 490 TVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 546
V+ HLHP++ L + P+++IY+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 1123 NVRTGMPCHLHPTSALFGMGYTPDYIIYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSI 1182
Query: 547 SN 548
+
Sbjct: 1183 KH 1184
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 1250 (445.1 bits), Expect = 2.6e-127, P = 2.6e-127
Identities = 247/549 (44%), Positives = 367/549 (66%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
++LTDGML+RE M DPLL +Y I+LDEAHERTL TD+ GLLK++ K R DL+L+V SA
Sbjct: 150 KFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASA 209
Query: 72 TLEAEKFQGYFY----GAP------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
TL+AEKF+ +F P ++ V GR PV+IFY Q P DY+++ + TV++IH
Sbjct: 210 TLDAEKFRDFFNHNDTSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIH 269
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGP---VKVVPLYSTLPPAMQQKIF 178
E GDIL FLTG+EE+E + ++ +G Q G ++++P+Y+ LP Q K+F
Sbjct: 270 QTEGDGDILAFLTGQEEVETVVSMLIEQARALG-QTGMKRHLRILPMYAGLPSFEQMKVF 328
Query: 179 EXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 238
E RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V P
Sbjct: 329 ERVSRSV-------RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVP 381
Query: 239 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGID 298
+S+ASA+QR+GR GR++ GKC+RLYTE++F+ L T PE+ RSNLA +L LK LGID
Sbjct: 382 VSQASANQRAGRGGRSRSGKCYRLYTEEAFDQ-LPQSTVPEMQRSNLAPVILQLKALGID 440
Query: 299 DLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESP 357
+++ F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES
Sbjct: 441 NVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESG 500
Query: 358 KYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNE 417
+ CS EILSI+AM+ + N FV P + A A +F +GDHLT+LNVY A+ ++N+
Sbjct: 501 NFGCSQEILSIAAMMQIQNVFVVPSNQKSQAIRAHRKFAVEEGDHLTMLNVYEAFIKHNK 560
Query: 418 DPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFM 477
+ WC ++F+N++ L A VR+QL +++ +F + S++ D + + +++G+F
Sbjct: 561 NSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSE-GDPD---PVLRCIVSGFFA 616
Query: 478 QVAHLERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYNEYVLTSRNFIRTVTDVRGEW 535
A TG Y T++D+ +H+HP++ L + P WVIYNE + TS+ ++R VT + W
Sbjct: 617 NAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAW 676
Query: 536 LIDIAPHYY 544
L+++APH+Y
Sbjct: 677 LLELAPHFY 685
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 1248 (444.4 bits), Expect = 4.2e-127, P = 4.2e-127
Identities = 234/540 (43%), Positives = 373/540 (69%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ +P L+RY I++DEAHER L TDVL GL K++L+ R DLKL+V SA
Sbjct: 397 KYMTDGVLLRESLNEPDLDRYSCIIMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSA 456
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T+ A++F +F GAP +PGR PV++ +++ P DY++ A++ V+ IH+ +GDILV
Sbjct: 457 TMNAKRFSDFFGGAPDFTIPGRTFPVDVMFSRSPVEDYVDQAVQQVLNIHVSMGTGDILV 516
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
F+TG+E+IE C + + + + D + ++P+YS +P +Q KIF+
Sbjct: 517 FMTGQEDIEVTCELVRERLDALNDPP-KLSILPIYSQMPADLQAKIFDRAPPGV------ 569
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK +V+TNIAETSLT+DGI+YV+D G++K KVYNP++ +++L ++PIS+A+A QRSGRA
Sbjct: 570 -RKCIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGRA 628
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGK FRL+TEK+F ++L QT PEI R+NL+NT+L +K LG+ D++ FDFMDPP
Sbjct: 629 GRTGPGKAFRLFTEKAFKDELYIQTIPEIQRTNLSNTILLIKSLGVKDMLDFDFMDPPPQ 688
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+T+ +L L LGALD+ G++T++G KM+ FP+DP ++K+++ + +Y C+ E+++I +M
Sbjct: 689 DTMTTSLFDLWALGALDNLGDMTDLGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITIVSM 748
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVPN F RP+E Q+ +D A+ +F + DHLT L+VY +K N +WC +F++ ++
Sbjct: 749 LSVPNVFYRPKERQEESDAAREKFFVPESDHLTFLHVYSQWKANGHSDAWCSRHFLHSKS 808
Query: 432 LKSADNVRQQLVRIMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
L+ A VR QL+ IM + ++ C D++ +R+ + +GY+ Q A ++ G+Y+
Sbjct: 809 LRRAKEVRDQLLDIMKTQKMDIVSCGTDWDV------VRRCICSGYYHQAAKVKGIGEYI 862
Query: 490 TVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 546
++ + V LHP++ L P++V+Y+E +LTS+ ++ TVT V WL D+ +Y +
Sbjct: 863 NLRTSVTVQLHPTSALYGLGFLPDYVVYHELILTSKEYMSTVTSVDPMWLADLGGVFYSV 922
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 1244 (443.0 bits), Expect = 1.1e-126, P = 1.1e-126
Identities = 247/549 (44%), Positives = 366/549 (66%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
++LTDGML+RE M DPLL +Y I+LDEAHERTL TD+ GLLK++ K R DL+L+V SA
Sbjct: 150 KFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASA 209
Query: 72 TLEAEKFQGYFY----GAP------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
TL+AEKF+ +F P ++ V GR PV+IFY Q P DY+++ + TV++IH
Sbjct: 210 TLDAEKFRDFFNQNDTSDPPRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIH 269
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGP---VKVVPLYSTLPPAMQQKIF 178
E GDIL FLTG+EE+E + ++ +G + G ++V+P+Y+ LP Q K+F
Sbjct: 270 QTEGDGDILAFLTGQEEVETVVSMLIEQARALG-RTGMKRHLRVLPMYAGLPSFEQMKVF 328
Query: 179 EXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 238
E RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V P
Sbjct: 329 ERVSRSV-------RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVP 381
Query: 239 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGID 298
+S+ASA+QR+GRAGR++ GKC+RLYTE +F+ L T PE+ RSNLA +L LK LGID
Sbjct: 382 VSQASANQRAGRAGRSRSGKCYRLYTEDAFDQ-LPQSTVPEMQRSNLAPVILQLKALGID 440
Query: 299 DLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESP 357
+++ F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES
Sbjct: 441 NVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESG 500
Query: 358 KYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNE 417
+ CS EILSI+AM+ + N FV P + A +F +GDHLT+LNVY A+ ++N+
Sbjct: 501 NFGCSQEILSIAAMMQIQNIFVVPSNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHNK 560
Query: 418 DPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFM 477
+ WC ++F+N++ L A VR+QL +++ +F + S++ D + + +++G+F
Sbjct: 561 NSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSE-GDPD---PVLRCIVSGFFA 616
Query: 478 QVAHLERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYNEYVLTSRNFIRTVTDVRGEW 535
A TG Y T++D+ +H+HP++ L + P WVIYNE + TS+ ++R VT + W
Sbjct: 617 NAARFHSTGVYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAW 676
Query: 536 LIDIAPHYY 544
L+++APH+Y
Sbjct: 677 LLELAPHFY 685
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
Identities = 245/549 (44%), Positives = 366/549 (66%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
++LTDGML+RE M DPLL +Y VI+LDEAHERTL TD+ GLLK++ K R DL+L+V SA
Sbjct: 119 KFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASA 178
Query: 72 TLEAEKFQGYFY----GAP------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
TL+A+KF+ +F P ++ V GR PV+IFY Q P DY+++ + TVV+IH
Sbjct: 179 TLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIH 238
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGP---VKVVPLYSTLPPAMQQKIF 178
E GD+L FLTG+EE+E + ++ + + G ++V+P+Y+ LP Q K+F
Sbjct: 239 QTEGDGDVLAFLTGQEEVETVVSMLIEQARALA-RTGMKRHLRVLPMYAGLPSFEQMKVF 297
Query: 179 EXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 238
E RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V P
Sbjct: 298 ERVSRSV-------RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVP 350
Query: 239 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGID 298
+S+ASA+QR+GR GR++ GKC+RLYTE++F+ L T PE+ RSNLA +L LK LGID
Sbjct: 351 VSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGID 409
Query: 299 DLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESP 357
+++ F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES
Sbjct: 410 NVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESG 469
Query: 358 KYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNE 417
+ CS EILSI+AM+ + N FV P + A +F +GDHLT+LN+Y A+ ++N+
Sbjct: 470 NFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNK 529
Query: 418 DPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFM 477
D WC ++F+N++ L A VR+QL +++ +F + S++ D + + +++G+F
Sbjct: 530 DSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSE-GDPDL---VLRCIVSGFFA 585
Query: 478 QVAHLERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYNEYVLTSRNFIRTVTDVRGEW 535
A TG Y T++D+ +H+HP++ L + P WVIYNE + TS+ ++R VT + W
Sbjct: 586 NAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAW 645
Query: 536 LIDIAPHYY 544
L+++APH+Y
Sbjct: 646 LLELAPHFY 654
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
Identities = 245/549 (44%), Positives = 366/549 (66%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
++LTDGML+RE M DPLL +Y VI+LDEAHERTL TD+ GLLK++ K R DL+L+V SA
Sbjct: 150 KFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASA 209
Query: 72 TLEAEKFQGYFY----GAP------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
TL+A+KF+ +F P ++ V GR PV+IFY Q P DY+++ + TVV+IH
Sbjct: 210 TLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIH 269
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGP---VKVVPLYSTLPPAMQQKIF 178
E GD+L FLTG+EE+E + ++ + + G ++V+P+Y+ LP Q K+F
Sbjct: 270 QTEGDGDVLAFLTGQEEVETVVSMLIEQARALA-RTGMKRHLRVLPMYAGLPSFEQMKVF 328
Query: 179 EXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 238
E RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V P
Sbjct: 329 ERVSRSV-------RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVP 381
Query: 239 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGID 298
+S+ASA+QR+GR GR++ GKC+RLYTE++F+ L T PE+ RSNLA +L LK LGID
Sbjct: 382 VSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGID 440
Query: 299 DLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESP 357
+++ F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES
Sbjct: 441 NVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESG 500
Query: 358 KYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNE 417
+ CS EILSI+AM+ + N FV P + A +F +GDHLT+LN+Y A+ ++N+
Sbjct: 501 NFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNK 560
Query: 418 DPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFM 477
D WC ++F+N++ L A VR+QL +++ +F + S++ D + + +++G+F
Sbjct: 561 DSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSE-GDPDL---VLRCIVSGFFA 616
Query: 478 QVAHLERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYNEYVLTSRNFIRTVTDVRGEW 535
A TG Y T++D+ +H+HP++ L + P WVIYNE + TS+ ++R VT + W
Sbjct: 617 NAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAW 676
Query: 536 LIDIAPHYY 544
L+++APH+Y
Sbjct: 677 LLELAPHFY 685
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 1242 (442.3 bits), Expect = 1.8e-126, P = 1.8e-126
Identities = 249/549 (45%), Positives = 360/549 (65%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
++LTDGML+RE M DPLL +Y V++LDEAHERTL TD+ GLLK++ K R DL+L+V SA
Sbjct: 150 KFLTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASA 209
Query: 72 TLEAEKFQGYFY----GAP------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
TL+AEKF+ +F P ++ V GR PV+IFY Q P DY++A + TVV+IH
Sbjct: 210 TLDAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIH 269
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVK---VVPLYSTLPPAMQQKIF 178
E GDIL FLTG+EE+E + ++ + + G K V+P+Y+ LP Q K+F
Sbjct: 270 QTEGDGDILAFLTGQEEVETVVSMLIEQARALA-RTGMKKHLRVLPMYAGLPSFEQMKVF 328
Query: 179 EXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 238
E RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V P
Sbjct: 329 ERVSHSV-------RKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVP 381
Query: 239 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGID 298
+S+ASA+QR+GR GR + GKC+RLYTE++F L T PE+ RSNLA VL LK LGID
Sbjct: 382 VSQASANQRAGRGGRNRSGKCYRLYTEEAFEQ-LPQSTVPEMQRSNLAPVVLQLKALGID 440
Query: 299 DLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESP 357
++ F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES
Sbjct: 441 SVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESG 500
Query: 358 KYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNE 417
+ CS EILSI+AM+ + N FV P + A +F +GDHLT+LNVY A+ ++N+
Sbjct: 501 NFGCSQEILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEAFIKHNK 560
Query: 418 DPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFM 477
WC ++F+N++ L A VR QL +++ +F + S++ D + + +++G+F
Sbjct: 561 SSQWCQEHFLNYKGLVRAATVRDQLKKLLVKFQVPKMSSE-GDPD---PVLRCIVSGFFA 616
Query: 478 QVAHLERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYNEYVLTSRNFIRTVTDVRGEW 535
A TG Y T++D+ +H+HP++ L + P WVIYNE + TS+ ++R VT + W
Sbjct: 617 NAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAW 676
Query: 536 LIDIAPHYY 544
L+++APH+Y
Sbjct: 677 LLELAPHFY 685
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 1241 (441.9 bits), Expect = 2.3e-126, P = 2.3e-126
Identities = 248/549 (45%), Positives = 367/549 (66%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
++LTDGML+RE M+DPLL++Y V++LDEAHERTL TD+ GLLK++LK R DL+L+V SA
Sbjct: 140 KFLTDGMLVREMMSDPLLKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASA 199
Query: 72 TLEAEKFQGYFY----G------APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
TL+A+KFQ +F G ++ V GR PV+IFYT P DY++A + TV++IH
Sbjct: 200 TLDAKKFQDFFNLNESGDASKDTCGILTVEGRTFPVDIFYTVSPVPDYVKATVETVLKIH 259
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVK---VVPLYSTLPPAMQQKIF 178
E GD+L FLTG+EE+E + ++ + + G K V+P+Y+ LP Q ++F
Sbjct: 260 ETEDDGDVLAFLTGQEEVEKVVSLLQEQARTLS-RYGMKKHLCVLPMYAGLPYNEQMRVF 318
Query: 179 EXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 238
E RK+VV+TNIAETS+TI+G+V+VID F K + YNPR +ESL+V+P
Sbjct: 319 ERMAPTV-------RKVVVATNIAETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTP 371
Query: 239 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGID 298
ISKASA QR+GRAGR + GKCFRLYTE+ F L T PE+ RSNLA +L LK LGID
Sbjct: 372 ISKASACQRAGRAGRNRAGKCFRLYTEEDFEK-LPESTVPEMQRSNLAPVILQLKALGID 430
Query: 299 DLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESP 357
+++ F F+ PP +++++ALE+L LG LD G LT+ MG +M+EFPL P +KML+ES
Sbjct: 431 NVLRFSFLSPPPAQSMVQALELLFALGGLDQYGRLTDPMGVRMAEFPLSPMFAKMLLESG 490
Query: 358 KYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNE 417
+ CS EI++I+AM+ + N FV P +K+A +F +GDHLT+LNVY A+ ++ +
Sbjct: 491 NFGCSKEIVTIAAMMQIQNIFVAPHNQRKSAAREHRKFAVAEGDHLTMLNVYEAFIKHQK 550
Query: 418 DPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFM 477
WC D+F+N++ L A VR+QL ++ +F + S++ D I + +++G+F
Sbjct: 551 SSQWCQDHFLNYKGLLRATAVREQLRHLLNKFKVPRTSSE-GDPDV---ILRCIVSGFFA 606
Query: 478 QVAHLERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYNEYVLTSRNFIRTVTDVRGEW 535
A + +G Y T++D++ +++HP + L + P+WV++NE V TS+ ++R VT V W
Sbjct: 607 NAARMHHSGSYRTLRDDRELYIHPDSVLYGEKPPKWVVFNEVVQTSKYYMRDVTAVESSW 666
Query: 536 LIDIAPHYY 544
L+++APH+Y
Sbjct: 667 LVELAPHFY 675
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 1236 (440.2 bits), Expect = 7.8e-126, P = 7.8e-126
Identities = 233/538 (43%), Positives = 360/538 (66%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ DP L+ Y I++DEAHER+L+TDVLFGLL+E++ R DLKL+V SA
Sbjct: 628 KYMTDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSA 687
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T+++ KF +F P +PGR PV++ +++ DY+E+A++ +Q+H+ GD+L+
Sbjct: 688 TMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLI 747
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
F+ G+E+IE C + + + + D + ++P+YS LP +Q KIF+
Sbjct: 748 FMPGQEDIEVTCEVLEERLAEI-DNAPALSILPIYSQLPSDLQAKIFQKSSDGL------ 800
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK VV+TNIAETSLT+DGI+YVID G+ K KVYNPR+ +++L + PIS+A+A+QRSGRA
Sbjct: 801 -RKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRA 859
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PG+ +RLYT++ + ++L T PEI R+NLANTVL LK LG+ DL+ F FMDPP
Sbjct: 860 GRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQ 919
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+ ++ +L L LGALD G LT +G +M+EFPLDP +ML+ + + CS E+L I +M
Sbjct: 920 DNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSM 979
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVP+ F RP+ + AD + +F + DHLT LNVY ++QNN +WC ++F++ +A
Sbjct: 980 LSVPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQNNYSSTWCNEHFIHIKA 1039
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
++ VRQQL IM + NL + S D+ + +RK + + YF Q A L+ G+Y+ +
Sbjct: 1040 MRKVREVRQQLKDIMTQQNLSVISCGI---DWDI-VRKCICSAYFYQAARLKGIGEYVNL 1095
Query: 492 KDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 546
+ HLHP++ L P++V+Y+E ++T++ +++ T V G WL ++ P ++ +
Sbjct: 1096 RTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSV 1153
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
Identities = 237/541 (43%), Positives = 370/541 (68%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ L++Y I++DEAHER L TDVL GLLK++L R DLKL+V SA
Sbjct: 282 KYMTDGVLLRESLVQTDLDKYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIVTSA 341
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T+ AE+F +F GAP +PGR PV++ +++ P DY+++A++ V+ IH+ + GDILV
Sbjct: 342 TMNAERFSRFFGGAPEFIIPGRTFPVDVHFSRTPCEDYVDSAVKQVLAIHVSQGPGDILV 401
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
F+TG+E+IE C + + + + D + ++P+YS +P Q KIFE
Sbjct: 402 FMTGQEDIEATCELVDERLKLLNDPP-KLSILPIYSQMPAEQQAKIFERAAPGV------ 454
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK++V+TNIAETSLT+DGI++V+D G++K KVYNP++ +++L ++PIS+A+A+QRSGRA
Sbjct: 455 -RKVIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPISQANANQRSGRA 513
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGK +RLYTE ++ N++ QT PEI R++L+NTVL LK LG+ DL+ FDFMDPP
Sbjct: 514 GRTGPGKAYRLYTEVAYKNEMYLQTIPEIQRTSLSNTVLLLKSLGVKDLLDFDFMDPPPQ 573
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPK-YNCSNEILSISA 370
ET+ +L L LGALD+ G+LT +G +M+ FP+DP ++K+++ + + Y CS E+L+I +
Sbjct: 574 ETISTSLFELWSLGALDNLGDLTHLGRQMTPFPMDPPLAKLIITAAEQYGCSEEMLTIVS 633
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVPN F RP+E Q+ +D A+ +F + DHLTLL+VY +K N WC +F++ +
Sbjct: 634 MLSVPNVFYRPKERQEESDAAREKFFVPESDHLTLLHVYTQWKSNGYSDHWCTKHFLHAK 693
Query: 431 ALKSADNVRQQL--VRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 488
L+ A VR QL + +M + L C D++ IRK + +G++ Q A ++ G++
Sbjct: 694 TLRRAKEVRDQLNDIMVMQKLPLISCGTDWDE------IRKCICSGFYHQAARVKGIGEF 747
Query: 489 LTVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYD 545
+ ++ + + LHP++ L + PE+V+Y+E +LTS+ ++ TVT V WL ++ +Y
Sbjct: 748 INLRTSVSMALHPTSALYGLGYVPEYVVYHELILTSKEYMSTVTAVDPHWLAELGGVFYS 807
Query: 546 L 546
+
Sbjct: 808 V 808
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 1229 (437.7 bits), Expect = 4.3e-125, P = 4.3e-125
Identities = 241/538 (44%), Positives = 365/538 (67%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ LE+Y VI++DEAHER+L TD+L GLLK+VL R D+KL+V SA
Sbjct: 586 KYMTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSA 645
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T+ ++KF +F GAP +PGR +PV+I + + P DY+EAA+R V+QIH+ +P+GDILV
Sbjct: 646 TMNSQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILV 705
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
F+TG+E+IE C I + + D + ++P+YS +P +Q KIF+
Sbjct: 706 FMTGQEDIEATCEIIADRLNQLHD-APRLSILPIYSQMPADLQAKIFDSAEPGV------ 758
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+VV+TNIAETSLT+ GI YV+D G+ K K+YN ++ +++L V+PIS+A+A+QR+GRA
Sbjct: 759 -RKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRA 817
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PG +RLYTE ++ ++ T PEI R+NL+NTVL LK LG++++ FDFMD P
Sbjct: 818 GRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPN 877
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+TLM +L L LGALD+ G LT +G+KMS FP+DP +SK+++ + Y C+ EI++I +M
Sbjct: 878 DTLMASLYELWTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSM 937
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVP+ F RP+E + +D A+ +F + DHL LLN+Y +++N SWC +F++ +
Sbjct: 938 LSVPSVFYRPKERAEESDAAREKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKT 997
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
LK A ++RQQLV IM++ + L S D+ + +R+ + + YF Q A + G+Y+ +
Sbjct: 998 LKRARDIRQQLVEIMSKQKISLESVS----DWDI-VRRVLCSAYFHQAACAKGIGEYVHL 1052
Query: 492 KDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 546
+ HLH ++ L + P++VIY+E VLTS+ ++ VT V WL + YY +
Sbjct: 1053 RSGMPCHLHVTSSLYGLGYLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSV 1110
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 1202 (428.2 bits), Expect = 3.1e-122, P = 3.1e-122
Identities = 241/553 (43%), Positives = 364/553 (65%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD---LKLVV 68
+Y+TDGML+REAM D L +Y VI+LDEAHERTL TDVLFGLLK + K R LK+++
Sbjct: 167 KYMTDGMLVREAMLDSSLSKYSVIILDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIII 226
Query: 69 MSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMC----- 123
MSATL+AE F YF AP++ + GR PV+I+YT+E ++DY++AA+ TV+QIH+
Sbjct: 227 MSATLDAELFSQYFNNAPVLYIEGRQFPVQIYYTEEIQKDYVDAALITVLQIHIAHLTDK 286
Query: 124 -------EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQK 176
E GDILVFLTG +EIE+ + + I + + V P++S LP Q K
Sbjct: 287 SINKEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMK 346
Query: 177 IFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLV 236
+FE RK++++TNIAETSLTI+GI YV+D G K K++NP++ ++SL +
Sbjct: 347 VFEKAPKGS-------RKVILATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNI 399
Query: 237 SPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLG 296
PISKASA QR+GRAGR GKC+RLYT+++F L + PEI RSN+AN +L LK +G
Sbjct: 400 IPISKASAKQRTGRAGREFEGKCYRLYTQETFEK-LDTSSIPEIKRSNIANVILQLKTIG 458
Query: 297 IDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVES 356
I+D++ FDF++ P +++++LE+L L A+ D+G+LTE+G+KM+ FPLDP SK L++S
Sbjct: 459 INDILSFDFLESPPVASVIKSLELLFCLDAISDNGSLTELGKKMALFPLDPMYSKTLIKS 518
Query: 357 PKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNN 416
++ CS E+L I ++LSV + F P+E +K ++ K F DGDH+T LNV+ ++++
Sbjct: 519 IEFECSEEVLIIISILSVESIFFTPKEKKKEVEDVKKIFFSPDGDHITFLNVFREFQKSK 578
Query: 417 --EDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAML 472
+ WC+D+F+N +++ NV +QLV+ L + C +DF+ I+K+ +
Sbjct: 579 PQQQQQWCFDHFINLKSMIKVLNVFEQLVKYCISLKLPIVSCGSDFD------RIKKSFI 632
Query: 473 AGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDV 531
G+F+ A L+ +Y T+ DN+ + +HP++ L D KP+ ++YNE +T++ F R + +
Sbjct: 633 GGFFLNTAILQPDKKYKTMVDNKEIQIHPTSFLFDQKPQHILYNELTITTKAFARNIIPI 692
Query: 532 RGEWLIDIAPHYY 544
G WL +I P YY
Sbjct: 693 EGSWLAEICPKYY 705
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 1196 (426.1 bits), Expect = 1.3e-121, P = 1.3e-121
Identities = 238/550 (43%), Positives = 360/550 (65%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
++LTDGML+RE M DPLL RY V++LDEAHERTL TD+ GLLK++ K R DL+L+V SA
Sbjct: 150 KFLTDGMLVREMMADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASA 209
Query: 72 TLEAEKFQGYFY----GAP------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
TL+AEKF+ +F G P ++ V GR PV+IFY Q P DY+++ + T ++IH
Sbjct: 210 TLDAEKFRDFFNQNDTGDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIKSTVETAMKIH 269
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGP---VKVVPLYSTLPPAMQQKIF 178
E GDIL FLTG+EE+E + ++ + + G ++V+P+Y+ LP Q K+F
Sbjct: 270 QMENDGDILAFLTGQEEVETVVSMLIEQARALS-RTGMRKHLRVLPMYAGLPSPDQMKVF 328
Query: 179 EXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 238
E RK++V+TN+AETS+TI GI YVID GF K + YNP+ +E L+V P
Sbjct: 329 ERVSRSV-------RKVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVP 381
Query: 239 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGI 297
+SKASA+QR+GRAGR + GKC+RLYT + + PQ T PE+ RSNLA +L LK LGI
Sbjct: 382 VSKASANQRAGRAGRNRSGKCYRLYTATEEDFEKLPQSTVPEMQRSNLAPVILQLKALGI 441
Query: 298 DDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVES 356
D+++ F F+ PP +++++ALE+L LG LD LTE +G +++EFPL+P +KML+ES
Sbjct: 442 DNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLES 501
Query: 357 PKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNN 416
+ CS EIL+I+AM+ + N F+ P + A +F +GDHLT+LNVY A+ +++
Sbjct: 502 GNFGCSQEILTIAAMMQIQNIFLIPPNQKSQAARQHRKFAVEEGDHLTMLNVYEAFVKHS 561
Query: 417 EDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYF 476
+ WC ++F+N++ L A VR+QL +++ F + S++ D + + +++G+F
Sbjct: 562 KSSQWCQEHFLNYKGLVRASVVREQLKKLLVCFKVPKKSSE-GDPD---PVLRCIVSGFF 617
Query: 477 MQVAHLERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYNEYVLTSRNFIRTVTDVRGE 534
A TG Y T++D+ +H+HP++ L + P WV+YNE + T++ ++R VT +
Sbjct: 618 ANAAKFHSTGAYRTIRDDHELHIHPTSVLYAEKPPRWVVYNEVIQTAKYYMRDVTAIESA 677
Query: 535 WLIDIAPHYY 544
WL+++APH+Y
Sbjct: 678 WLVELAPHFY 687
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 1183 (421.5 bits), Expect = 3.2e-120, P = 3.2e-120
Identities = 242/549 (44%), Positives = 361/549 (65%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
++LTDGML+RE M DPLL +Y I+LDEAHERTL TD+ GLLK++ + R DL+L+V SA
Sbjct: 150 KFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASA 209
Query: 72 TLEAEKFQGYFY----GAP------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
TL+AEKF+ +F P ++ V GR PV+IFY Q P DY+++ + TV++IH
Sbjct: 210 TLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIH 269
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGP---VKVVPLYSTLPPAMQQKIF 178
E GDIL FLTG+EE+E + ++ +G + G ++V+P+Y+ LP Q K+F
Sbjct: 270 QTEGDGDILAFLTGQEEVETVVSMLIEQARALG-RTGMKRHLRVLPMYAGLPSFEQMKVF 328
Query: 179 EXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 238
E RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V+P
Sbjct: 329 ERVSRSV-------RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAP 381
Query: 239 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGI 297
+S+ASA+QR+GRAGR++ GKC+RLYTE++F D PQ T PE+ RSNLA +L LK LGI
Sbjct: 382 VSQASANQRAGRAGRSRSGKCYRLYTEEAF--DKLPQCTVPEMQRSNLAPVILQLKALGI 439
Query: 298 DDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVES 356
D+++ F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES
Sbjct: 440 DNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLES 499
Query: 357 PKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNN 416
+ CS EILSI+AM+ + N FV P + A +F +GDHLT+LNVY A+ ++N
Sbjct: 500 GNFGCSQEILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHN 559
Query: 417 EDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYF 476
++ WC ++F+N++ L A VR+QL +++ +F + S++ D + + +++G+F
Sbjct: 560 KNSQWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSSE-GDPD---PVLRCIVSGFF 615
Query: 477 MQVAHLERTGQYLTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEW 535
A TG Y + ++L+ + K + VIYNE + TS+ ++R VT + W
Sbjct: 616 ANAARFHSTGAYSVILSPHSLYLYYLTLFNRKFLQKVIYNEVIQTSKYYMRDVTAIESAW 675
Query: 536 LIDIAPHYY 544
L+++APH+Y
Sbjct: 676 LLELAPHFY 684
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 1095 (390.5 bits), Expect = 1.5e-119, Sum P(2) = 1.5e-119
Identities = 223/500 (44%), Positives = 330/500 (66%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
++LTDGML+RE M DPLL +Y VI+LDEAHERTL TD+ GLLK++ K R DL+L+V SA
Sbjct: 150 KFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASA 209
Query: 72 TLEAEKFQGYFY----GAP------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
TL+A+KF+ +F P ++ V GR PV+IFY Q P DY+++ + TVV+IH
Sbjct: 210 TLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIH 269
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGP---VKVVPLYSTLPPAMQQKIF 178
E GD+L FLTG+EE+E + ++ + + G ++V+P+Y+ LP Q K+F
Sbjct: 270 QTEGDGDVLAFLTGQEEVETVVSMLIEQARALA-RTGMKRHLRVLPMYAGLPSFEQMKVF 328
Query: 179 EXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 238
E RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V P
Sbjct: 329 ERVSRSV-------RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVP 381
Query: 239 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGID 298
+S+ASA+QR+GR GR++ GKC+RLYTE++F+ L T PE+ RSNLA +L LK LGID
Sbjct: 382 VSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGID 440
Query: 299 DLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESP 357
+++ F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES
Sbjct: 441 NVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESG 500
Query: 358 KYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNE 417
+ CS EILSI+AM+ + N FV P + A +F +GDHLT+LN+Y A+ ++N+
Sbjct: 501 NFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNK 560
Query: 418 DPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFM 477
D WC ++F+N++ L A VR+QL +++ +F + S++ D + + +++G+F
Sbjct: 561 DSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSE-GDPDL---VLRCIVSGFFA 616
Query: 478 QVAHLERTGQYLTVKDNQVV 497
A TG Y + N+V+
Sbjct: 617 NAARFHSTGAYRVIY-NEVI 635
Score = 102 (41.0 bits), Expect = 1.5e-119, Sum P(2) = 1.5e-119
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 512 VIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
VIYNE + TS+ ++R VT + WL+++APH+Y
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 661
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 1094 (390.2 bits), Expect = 2.0e-119, Sum P(2) = 2.0e-119
Identities = 227/500 (45%), Positives = 324/500 (64%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
++LTDGML+RE M DPLL +Y V++LDEAHERTL TD+ GLLK++ K R DL+L+V SA
Sbjct: 150 KFLTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASA 209
Query: 72 TLEAEKFQGYFY----GAP------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
TL+AEKF+ +F P ++ V GR PV+IFY Q P DY++A + TVV+IH
Sbjct: 210 TLDAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIH 269
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVK---VVPLYSTLPPAMQQKIF 178
E GDIL FLTG+EE+E + ++ + + G K V+P+Y+ LP Q K+F
Sbjct: 270 QTEGDGDILAFLTGQEEVETVVSMLIEQARALA-RTGMKKHLRVLPMYAGLPSFEQMKVF 328
Query: 179 EXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 238
E RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V P
Sbjct: 329 ERVSHSV-------RKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVP 381
Query: 239 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGID 298
+S+ASA+QR+GR GR + GKC+RLYTE++F L T PE+ RSNLA VL LK LGID
Sbjct: 382 VSQASANQRAGRGGRNRSGKCYRLYTEEAFEQ-LPQSTVPEMQRSNLAPVVLQLKALGID 440
Query: 299 DLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESP 357
++ F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES
Sbjct: 441 SVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESG 500
Query: 358 KYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNE 417
+ CS EILSI+AM+ + N FV P + A +F +GDHLT+LNVY A+ ++N+
Sbjct: 501 NFGCSQEILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEAFIKHNK 560
Query: 418 DPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFM 477
WC ++F+N++ L A VR QL +++ +F + S++ D + + +++G+F
Sbjct: 561 SSQWCQEHFLNYKGLVRAATVRDQLKKLLVKFQVPKMSSE-GDPD---PVLRCIVSGFFA 616
Query: 478 QVAHLERTGQYLTVKDNQVV 497
A TG Y + N+V+
Sbjct: 617 NAARFHSTGAYRVIY-NEVI 635
Score = 102 (41.0 bits), Expect = 2.0e-119, Sum P(2) = 2.0e-119
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 512 VIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
VIYNE + TS+ ++R VT + WL+++APH+Y
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 661
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
Identities = 239/535 (44%), Positives = 350/535 (65%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKN--RPDLKLVVM 69
+Y+TDGMLLRE + DP L +Y I++DEAHERTL+T++L LLK+V+ + DLK+++
Sbjct: 325 KYVTDGMLLREFLQDPTLGKYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIA 384
Query: 70 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGD 128
SAT+ AEKF +F AP++ +PGR PV+I YT++PE +Y++AAI T+ QIHM +P GD
Sbjct: 385 SATINAEKFSQFFNNAPILNIPGRRFPVKIHYTKQPEANYIQAAITTIFQIHMTQPLPGD 444
Query: 129 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXX 188
ILVFLTG++EIE + I +GDQ+ P+ V +Y+ LP +QQKIF+
Sbjct: 445 ILVFLTGQDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNT--- 501
Query: 189 XXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 248
RKIV++TNIAETS+TIDGI YVIDPG+ KQ VYNP +ESL+V P S+ASA QR+
Sbjct: 502 ----RKIVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRA 557
Query: 249 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 308
GRAGR PGKCFRL+T+ SF N+L PEI R NL + +L L LGI+DL+ F+FMDP
Sbjct: 558 GRAGRVGPGKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDP 617
Query: 309 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 368
P+ E +++AL +L LGAL+ G LT+ G+KMSEFPLDP +K ++ S K++ + +I+SI
Sbjct: 618 PSKEAIIKALNLLYALGALNTQGKLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISI 677
Query: 369 SAMLSVP-NCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFV 427
AML+ N F RP++ ++ AD+ K F + GD LL ++ + + WC D F+
Sbjct: 678 IAMLNESSNLFYRPKDKKELADKRKQEFNDLQGDQFMLLKIWQQWVDSGYSVQWCQDYFI 737
Query: 428 NHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVN-------IRKAMLAGYFMQVA 480
++ +K N+ +QL+R+ + +++ S RD+ + K +++G+F +
Sbjct: 738 QYKTMKRIKNIYEQLIRLSKKIGIEVNSRH-QHRDHLQENTDNNTLLTKCLISGFFNNIV 796
Query: 481 HLERTG---QYLTVK---DNQVVHLHPSNC---LDHKPEWVIYNEYVLTSRNFIR 526
L G Q LT +N ++HPS+C L KP++++Y E VLTS+ ++R
Sbjct: 797 KLSPMGDCYQKLTNGKGGNNTPCYIHPSSCIYKLKPKPKYLLYYELVLTSKEYMR 851
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 999 (356.7 bits), Expect = 3.2e-119, Sum P(2) = 3.2e-119
Identities = 211/514 (41%), Positives = 319/514 (62%)
Query: 60 NRPDLKLVVMSATLEAEKFQGYF-YG---------APLMKVPGRLHPVEIFYTQEPERDY 109
N LKL++ SATL A F +F Y + ++ + GR +PV+I Y +E +Y
Sbjct: 210 NDNSLKLIISSATLNANDFFNFFNYNQTNDKSKDTSTILSIEGRTYPVDIHYLEESTSNY 269
Query: 110 LEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITK--EITNM------GDQVGPV- 160
++ I+T++ IH +P GDILVFLTG+EEIE + + EI Q P
Sbjct: 270 IQTTIQTIIDIHTTQPPGDILVFLTGQEEIEKLIQTLDDKFEILRQYHQQHHHQQQQPFM 329
Query: 161 --KVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 218
++P+YS L Q K+FE RKI++STNIAETS+TIDG+VYV+D G
Sbjct: 330 KYSLLPMYSGLSINKQIKVFESVGDSKKI-----RKIIISTNIAETSITIDGVVYVVDCG 384
Query: 219 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 278
F K K Y+ +ESL++ P SK+SA+QR+GRAGR++ GKC+RLYTE ++ L QT P
Sbjct: 385 FVKIKSYDSESGLESLVIVPTSKSSANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTIP 444
Query: 279 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MG 337
EI RSNL NT+L LK LGID++++FDF+ P +L+R LEVL LGALDD+G LT G
Sbjct: 445 EIQRSNLTNTILQLKALGIDNILNFDFISQPPSSSLIRGLEVLYGLGALDDNGKLTNPTG 504
Query: 338 EKMSEFPLDPQMSKMLVESPK--YNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARF 395
M+EFP DP SKM+++S +NCS+E ++I+AML++ F + K+ +
Sbjct: 505 MIMAEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLNIQGLFTN--QNHKSRKHLLVK- 561
Query: 396 GHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKL-- 453
+GDHLTLLN+++++ N P WC + +N++A++ VR+QL+ ++++ +
Sbjct: 562 ---EGDHLTLLNIFNSFISNQSSPQWCNQHQINYKAMQRVLQVRKQLLAYAKKYSINVIS 618
Query: 454 CSNDFNSRDYYVN-IRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSN--CLDHKPE 510
C + N+R+ N IRKA+++G+F A L+ G Y T+++ + LHP++ CL + P+
Sbjct: 619 CFDSNNNREQCSNLIRKAIVSGFFTNAAQLQPDGSYQTIREKHKLWLHPTSVLCLSNSPQ 678
Query: 511 WVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
WVI+NE +T++ +++ VT + WL +IAPHYY
Sbjct: 679 WVIFNEVTITTKEYMKDVTSIEPNWLFEIAPHYY 712
Score = 195 (73.7 bits), Expect = 3.2e-119, Sum P(2) = 3.2e-119
Identities = 43/81 (53%), Positives = 55/81 (67%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD-------- 63
+Y+TDGML+RE M DPLL +Y VI++DEAHER+L TD+L GLLK+V K R
Sbjct: 152 KYVTDGMLIREMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNND 211
Query: 64 --LKLVVMSATLEAEKFQGYF 82
LKL++ SATL A F +F
Sbjct: 212 NSLKLIISSATLNANDFFNFF 232
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
Identities = 245/555 (44%), Positives = 359/555 (64%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
++LTDGML+RE M DPLL +Y I+LDEAHERTL TD+ GLLK++ + R DL+L+V SA
Sbjct: 142 KFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASA 201
Query: 72 TLEAEKFQGYFY----GAP------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
TL+AEKF+ +F P ++ V GR PV+IFY Q P DY+++ + TV++IH
Sbjct: 202 TLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIH 261
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGP---VKVVPLYSTLPPAMQQKIF 178
E GDIL FLTG+EE+E + ++ +G + G ++V+P+Y+ LP Q K+F
Sbjct: 262 QTEGDGDILAFLTGQEEVETVVSMLIEQARALG-RTGMKRHLRVLPMYAGLPSFEQMKVF 320
Query: 179 EXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 238
E RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V+P
Sbjct: 321 ERVSRSV-------RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAP 373
Query: 239 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGI 297
+S+ASA+QR+GRAGR++ GKC+RLYTE++F D PQ T PE+ RSNLA +L LK LGI
Sbjct: 374 VSQASANQRAGRAGRSRSGKCYRLYTEEAF--DKLPQCTVPEMQRSNLAPVILQLKALGI 431
Query: 298 DDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVES 356
D+++ F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES
Sbjct: 432 DNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLES 491
Query: 357 PKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNN 416
+ CS EILSI+AM+ + N FV P + A +F +GDHLT+LNVY A+ ++N
Sbjct: 492 GNFGCSQEILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHN 551
Query: 417 EDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYF 476
++ WC ++F+N++ L A VR+QL +++ +F + S++ D + + +++G+F
Sbjct: 552 KNSQWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSSE-GDPD---PVLRCIVSGFF 607
Query: 477 MQVAHLERTGQY---LTVKDNQV-VHLHPSNCLDHKPEW---VIYNEYVLTSRNFIRTVT 529
A TG Y L + VHL W VIYNE + TS+ ++R VT
Sbjct: 608 ANAARFHSTGAYSRTLAHSGREAQVHLFTVVPGTQSRYWGFRVIYNEVIQTSKYYMRDVT 667
Query: 530 DVRGEWLIDIAPHYY 544
+ WL+++APH+Y
Sbjct: 668 AIESAWLLELAPHFY 682
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 834 (298.6 bits), Expect = 7.6e-118, Sum P(2) = 7.6e-118
Identities = 173/401 (43%), Positives = 253/401 (63%)
Query: 152 NMGDQ-VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDG 210
N D + P + P+YS L Q KIF+ RKI+VSTNIAETSLT+DG
Sbjct: 763 NTNDHMIYPFYIFPIYSQLSSEQQSKIFKKYDL---------RKIIVSTNIAETSLTLDG 813
Query: 211 IVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNN 270
I YVID G+ K KVYN + ++ L V+PIS+A+A+QRSGRAGRT G C+RLYTE +F
Sbjct: 814 IKYVIDTGYCKLKVYNQTIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLC 873
Query: 271 DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD 330
DL PEI RSNL+N VL LK L + +L FDF+D P+ E+++ +L L LGA++++
Sbjct: 874 DLYQNNIPEIQRSNLSNVVLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNE 933
Query: 331 GNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADE 390
GNLT++G KM +FPLDP +SK+++ S + C+ EIL I +MLS P+ F+ +E ++ +
Sbjct: 934 GNLTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIES 993
Query: 391 AKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFN 450
K +F + DHLTLLN+Y ++ +N SWC NF+ ++AL A V QL+ I+ N
Sbjct: 994 KKEKFTVPESDHLTLLNIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLN 1053
Query: 451 LKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL---DH 507
+K S D N + IRK + +GYF A L+ +Y+ ++ N H+HP++ L +
Sbjct: 1054 IKNVSCD-NKWEL---IRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGY 1109
Query: 508 KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
P++VIY E V T++ ++R VT V EWL ++ P ++ + N
Sbjct: 1110 TPDYVIYQEIVFTTKEYMRNVTTVDPEWLCELGPLFFYMKN 1150
Score = 347 (127.2 bits), Expect = 7.6e-118, Sum P(2) = 7.6e-118
Identities = 65/137 (47%), Positives = 95/137 (69%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY+TDG+LLRE + D L++Y VI++DEAHER++ TDVL G+LK + R DLKL+V SA
Sbjct: 573 RYVTDGILLRETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSA 632
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS----- 126
T++A+KF +F AP+ + GR V I Y + P DY+E A++ +QIH+ + +
Sbjct: 633 TIDAKKFSAFFGNAPIYNIQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNF 692
Query: 127 GDILVFLTGEEEIEDAC 143
GDIL+F+TG+E+I C
Sbjct: 693 GDILIFMTGQEDINATC 709
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 834 (298.6 bits), Expect = 7.6e-118, Sum P(2) = 7.6e-118
Identities = 173/401 (43%), Positives = 253/401 (63%)
Query: 152 NMGDQ-VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDG 210
N D + P + P+YS L Q KIF+ RKI+VSTNIAETSLT+DG
Sbjct: 763 NTNDHMIYPFYIFPIYSQLSSEQQSKIFKKYDL---------RKIIVSTNIAETSLTLDG 813
Query: 211 IVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNN 270
I YVID G+ K KVYN + ++ L V+PIS+A+A+QRSGRAGRT G C+RLYTE +F
Sbjct: 814 IKYVIDTGYCKLKVYNQTIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLC 873
Query: 271 DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD 330
DL PEI RSNL+N VL LK L + +L FDF+D P+ E+++ +L L LGA++++
Sbjct: 874 DLYQNNIPEIQRSNLSNVVLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNE 933
Query: 331 GNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADE 390
GNLT++G KM +FPLDP +SK+++ S + C+ EIL I +MLS P+ F+ +E ++ +
Sbjct: 934 GNLTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIES 993
Query: 391 AKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFN 450
K +F + DHLTLLN+Y ++ +N SWC NF+ ++AL A V QL+ I+ N
Sbjct: 994 KKEKFTVPESDHLTLLNIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLN 1053
Query: 451 LKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL---DH 507
+K S D N + IRK + +GYF A L+ +Y+ ++ N H+HP++ L +
Sbjct: 1054 IKNVSCD-NKWEL---IRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGY 1109
Query: 508 KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
P++VIY E V T++ ++R VT V EWL ++ P ++ + N
Sbjct: 1110 TPDYVIYQEIVFTTKEYMRNVTTVDPEWLCELGPLFFYMKN 1150
Score = 347 (127.2 bits), Expect = 7.6e-118, Sum P(2) = 7.6e-118
Identities = 65/137 (47%), Positives = 95/137 (69%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY+TDG+LLRE + D L++Y VI++DEAHER++ TDVL G+LK + R DLKL+V SA
Sbjct: 573 RYVTDGILLRETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSA 632
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS----- 126
T++A+KF +F AP+ + GR V I Y + P DY+E A++ +QIH+ + +
Sbjct: 633 TIDAKKFSAFFGNAPIYNIQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNF 692
Query: 127 GDILVFLTGEEEIEDAC 143
GDIL+F+TG+E+I C
Sbjct: 693 GDILIFMTGQEDINATC 709
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
Identities = 229/540 (42%), Positives = 346/540 (64%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ + L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SA
Sbjct: 626 KYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSA 685
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++AEKF +F P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+
Sbjct: 686 TMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILI 745
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
F+ G+E+IE +I + + + + + V+P+YS LP +Q KIF+
Sbjct: 746 FMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV------ 798
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK +V+TNIAETSLT+DGI++VID G+ K KV +P + L + I K + +G +
Sbjct: 799 -RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIMEIQKIQKNINTGCS 857
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
G T P +C RLYT+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP
Sbjct: 858 GCTSP-RCCRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPE 916
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+ ++ ++ L LGALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +M
Sbjct: 917 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 976
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVP F RP+ ++ +D+ + +F + DHL+ LNVY +K NN WC D+F++ +A
Sbjct: 977 LSVPAIFYRPKGREEESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKA 1036
Query: 432 LKSADNVRQQLVRIMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
++ VR QL IM R +L C D++ +RK + A YF Q A L+ G+Y+
Sbjct: 1037 MRKVREVRAQLKDIMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYV 1090
Query: 490 TVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 546
++ HLHP++ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 1091 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1150
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 1136 (405.0 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 234/550 (42%), Positives = 357/550 (64%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+++TDG+LLRE + D L++Y +++DEAHER+L TD+L G K +L R DLKL++ SA
Sbjct: 447 KFVTDGILLRETLLDDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSA 506
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP--SGDI 129
T+ A+KF +F AP +PGR PV+ YT P +DY+EAA+ V+IH+ SGDI
Sbjct: 507 TMNAKKFSAFFGNAPQFTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDI 566
Query: 130 LVFLTGEEEIE---DACRK-----ITKEI-TNMGDQVGPVKVVPLYSTLPPAMQQKIFEX 180
L+F+TG+E+IE D ++ +K+ T +++ ++++P+YS LP +Q KIF+
Sbjct: 567 LIFMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQD 626
Query: 181 XXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPIS 240
RKI+++TNIAETSLTI GI YVID G++K KVYNP++ ++SL+++PIS
Sbjct: 627 LHGTK-------RKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPIS 679
Query: 241 KASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGI-DD 299
KA+A QRSGRAGRT PG +RLYTE +F D+ QT PEI R+NL+NT+L LK L + D+
Sbjct: 680 KANADQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDE 739
Query: 300 LVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKY 359
L F F+D P +T + +L L ++GA+D G LT +G +M++FPL P +SK+L+ + +
Sbjct: 740 LSKFPFIDKPPLQTFLSSLYELWFIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRN 799
Query: 360 NCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP 419
CS+E+L+I +MLSVP F RP+E QK AD A+ +F DHLTLLNV+ ++ NN
Sbjct: 800 GCSDEMLTIVSMLSVPQVFYRPKERQKEADIARNKFFIAKSDHLTLLNVFEQWRANNFSS 859
Query: 420 SWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQV 479
WC +FV +++L A ++R QL+ I+ + + S+ +D+ + I+K + +G+ Q
Sbjct: 860 HWCNKHFVQYKSLVRARDIRDQLLTILKSQKIPVISS---GKDWDI-IKKCICSGFAHQA 915
Query: 480 AHLERTGQYLTVKDNQVVHLHPSNCLD---HKPEWVIYNEYVLTSRNFIRTVTDVRGEWL 536
A + Y+ +K V LHP++ L P +V+Y+E ++TS+ +I VT V WL
Sbjct: 916 AKITGLRNYVHLKTGVSVQLHPTSALHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWL 975
Query: 537 IDIAPHYYDL 546
++ YD+
Sbjct: 976 MEYGGLLYDI 985
Score = 38 (18.4 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 9 LGGRYLTDGMLL--REAMTDPLLERYKVIVLDEAHERTLATD-VLFGLLKEVLKNRPD 63
L + LT G+LL ++ P + I +A + + + ++F L E+LKN+ +
Sbjct: 17 LTSKELTPGLLLTLQKLAQKPNTNLEQFIASCKALTKLSSNNPIIFNELLELLKNKSE 74
>TAIR|locus:2147785 [details] [associations]
symbol:AT5G14900 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0004386
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
KO:K12820 EMBL:AL391146 OMA:IRTVTHI IPI:IPI00537280 PIR:T51435
RefSeq:NP_196994.1 UniGene:At.65514 ProteinModelPortal:Q9LFR5
SMR:Q9LFR5 EnsemblPlants:AT5G14900.1 GeneID:831342
KEGG:ath:AT5G14900 TAIR:At5g14900 InParanoid:Q9LFR5
PhylomeDB:Q9LFR5 ProtClustDB:CLSN2916823 Genevestigator:Q9LFR5
Uniprot:Q9LFR5
Length = 301
Score = 1136 (405.0 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 210/275 (76%), Positives = 242/275 (88%)
Query: 283 SNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSE 342
+NLANTVLTLK L + +LV FD +D PAP+TL RAL+ L +LGALDDD NLT+ GE MSE
Sbjct: 2 TNLANTVLTLKGLSVKNLVRFDLIDSPAPDTLARALDDLYHLGALDDDCNLTKTGEMMSE 61
Query: 343 FPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPR-EAQKAADEAKARFGHIDGD 401
FPLDPQM+KML+ SP++NCSNEILSISAMLSVPNCF+RPR EAQKAADEAK+ F HIDGD
Sbjct: 62 FPLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHIDGD 121
Query: 402 HLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSR 461
HLTLLN++HA+ QNN+DP+WC F+N+RA+KSA +VR+QLVRIM RF +KLCS DFNSR
Sbjct: 122 HLTLLNLFHAFLQNNQDPNWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKLCSPDFNSR 181
Query: 462 DYYVNIRKAMLAGYFMQVAHLERTGQYLTV--KDNQVVHLHPSNCLDHKPEWVIYNEYVL 519
DYYVNIRKA+LAGYFMQVAHLERTG YLT KD+QVVHLHPSNCLDHKPEWV+YNEYV
Sbjct: 182 DYYVNIRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLHPSNCLDHKPEWVVYNEYVF 241
Query: 520 TSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEA 554
TSRNFIRTVT +RGEWL+D+APHYY L+NFP EA
Sbjct: 242 TSRNFIRTVTHIRGEWLVDVAPHYYKLANFPSSEA 276
Score = 38 (18.4 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 199 TNIAETSLTIDGI 211
TN+A T LT+ G+
Sbjct: 2 TNLANTVLTLKGL 14
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 233/537 (43%), Positives = 352/537 (65%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+YLTDGMLLRE + DP+L +Y ++LDEAHERTL TD+L G +K+++K RP L++++MSA
Sbjct: 190 KYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSA 249
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL AE+F +F GA + + GR +PV+I YT PE DYL+A +RT+ Q+H P GDILV
Sbjct: 250 TLNAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILV 309
Query: 132 FLTGEEEIEDACRKITKEITN-MGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
FLTG++EIE A + K + + + ++ PL+++LP Q ++F
Sbjct: 310 FLTGQDEIE-ALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVF-------LPALA 361
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+V+STNIAETS+TI GI YVID G AK K +N ++ +ESL V PIS+++A QRSGR
Sbjct: 362 NHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGR 421
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGR G+C+R+YTE F+ L +T PEI R +L+ VLTLK G +D+++F +MDPP+
Sbjct: 422 AGREAAGQCYRIYTEADFDK-LPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPS 480
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
E L+RALE L +GALDD+G++ ++G +MS PL P +++ ++ + ++NC +E++ + +
Sbjct: 481 KEGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVS 540
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP--SWCYDNFVN 428
LS + F+ P+E + A EA+ +F H +GD LT LN Y +++ D WC NF+N
Sbjct: 541 CLSTDSMFLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQNFIN 600
Query: 429 HRALKSADNVRQQLVRIMARFNLKLCSN-DFNSRDYYVNIRKAMLAGYFMQVAHLERTGQ 487
RALK+ ++R+QL + +L S+ + NS N+ + L+GY A L G
Sbjct: 601 RRALKTILDIRKQLREHCLKDGWELNSSPEVNSE----NLLLSFLSGYITNTALLHPDGS 656
Query: 488 YLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 543
Y T+ NQ + +HPS+ L K E ++Y+E V T+++++R V+ +R WL +APHY
Sbjct: 657 YRTIIGNQTISIHPSSSLFGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHY 713
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 1141 (406.7 bits), Expect = 9.1e-116, P = 9.1e-116
Identities = 242/547 (44%), Positives = 348/547 (63%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL-----KL 66
++LTDGMLLREA+ DP+L +Y V++LDEAHERT+ TDVLFG++K K R +L K+
Sbjct: 118 KFLTDGMLLREAIGDPILRKYSVVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKV 177
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS 126
+VMSAT++ ++F YF GAP++ + GR HP+++FYT++P+ DYL+AA+ +V QIH PS
Sbjct: 178 IVMSATMDVDQFSQYFNGAPVLYLEGRQHPIQVFYTKQPQSDYLQAALVSVFQIHQEAPS 237
Query: 127 G-DILVFLTGEEEIEDACRKITKEIT-NMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXX 184
DILVFLTG+EEIE A K ++I ++ D + V+PLY++LP + Q ++F+
Sbjct: 238 SQDILVFLTGQEEIE-AMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAAPKG 296
Query: 185 XXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASA 244
RK+++STNIAETS+TI GI YV+D G K K YNP + +E L V +SKA A
Sbjct: 297 C-------RKVILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQA 349
Query: 245 HQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEI---LRSNLANTVLTLKKLGIDDLV 301
QR+GRAGR G C+RLYTE F T PEI R NLA+ +L L L I +++
Sbjct: 350 WQRTGRAGREDSGICYRLYTEDEFEK-FDKMTVPEIQSLCRCNLASVLLQLLALRIPNIL 408
Query: 302 HFDFMDPPAPETLMRALEVLNYLGALD---DDGNLTEMGEKMSEFPLDPQMSKMLVESPK 358
FDFM P+P+ + A+E L+ LGA++ D LT +G KM+ FPL+P+ SK ++ SPK
Sbjct: 409 TFDFMSKPSPDAIQAAIEQLDLLGAVEQKEDQLVLTPLGRKMAAFPLEPKFSKTILLSPK 468
Query: 359 YNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNED 418
++C+ EIL+I ++LSV + P + + +F +GDHLTLLNVY A+K + +
Sbjct: 469 FHCTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHLTLLNVYRAFKNVSGN 528
Query: 419 PSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQ 478
WC +NFVN R + +VR QL I + ++ + S SR NIR+ + FM
Sbjct: 529 KEWCKENFVNGRNMMLVSDVRAQLRDICVKLSMPMES----SRSDTANIRRCLAHSLFMN 584
Query: 479 VAHLERTGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDVRGEWLI 537
A L+ G Y TV +Q+V +HPS+ L H KP V+YN + T++ ++R + V EWL
Sbjct: 585 AAELQPDGTYSTVNSHQLVAIHPSSVLFHCKPSCVVYNGLLHTNKCYMRDLCVVDAEWLY 644
Query: 538 DIAPHYY 544
D AP Y+
Sbjct: 645 DAAPDYF 651
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 1140 (406.4 bits), Expect = 1.2e-115, P = 1.2e-115
Identities = 236/561 (42%), Positives = 362/561 (64%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
++LTDGMLLREA+ DPLL RY VI++DEAHER+L+TD+L G+LK++LK RP+L+++V SA
Sbjct: 117 KFLTDGMLLREALVDPLLSRYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSA 176
Query: 72 TLEAEKFQGYFYG-----AP----------LMKVPGRLHPVEIFYTQEPERDYLEAAIRT 116
TL+AE F YF G P ++ + GR++PV+ + + +Y+E +++T
Sbjct: 177 TLQAEDFLRYFAGDESQQGPNGEVGGNTGKIISIEGRMYPVDTLFLESAAENYVERSVKT 236
Query: 117 VVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQK 176
V IH+ E GDIL+FLTG EEIE A + I++ T + + + +PLY+ L Q
Sbjct: 237 VFDIHLQEGEGDILIFLTGREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMY 296
Query: 177 IFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLV 236
+FE RK+VVSTNIAE S+TI+GIVYV+D GFAK + Y+P +E+L
Sbjct: 297 VFEPAPENT-------RKVVVSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTA 349
Query: 237 SPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLG 296
PISKA+A QR+GRAGRT+PGKCFRLYT+ ++ L T PEI RSNLA ++ LK LG
Sbjct: 350 VPISKAAAVQRAGRAGRTKPGKCFRLYTQHAYEQ-LPDATIPEIQRSNLAPVIMQLKALG 408
Query: 297 IDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVE 355
ID++V FDF+ P + ++RA E+L LGA+DD LT+ +G +M+E +DP M+K+L+
Sbjct: 409 IDNIVRFDFLTSPPADLVIRAFELLYSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLS 468
Query: 356 SPKYNCSNEILSISAMLSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAY-K 413
+ + C +EIL+I+AM+S+ +V+ +K+++ ++ +F +GDHLT LNVY A+
Sbjct: 469 AQSFGCLSEILTIAAMVSLQGAVWVQHDGDKKSSESSRRKFAVEEGDHLTYLNVYQAFVT 528
Query: 414 QNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCS---NDFNSRDYYV---NI 467
+ ++ WC DN +N+R+L A +VR QL R + RF +++ + +N D I
Sbjct: 529 KGKKESKWCRDNLLNYRSLLRAVSVRAQLKRYLERFGIQVDETFPSHYNKSDLSKPAEKI 588
Query: 468 RKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTS-RNFI 525
++ + GYF A ++ G + TV +H HPS+ + + K +WVI++E + T + FI
Sbjct: 589 QRCLTTGYFAHAARMQPDGTFKTVSGGMTLHAHPSSLMFNRKADWVIFHEIMQTGEKTFI 648
Query: 526 RTVTDVRGEWLIDIAPHYYDL 546
R +T + +L++ AP+YY++
Sbjct: 649 RDITKIEKSYLLEYAPNYYNM 669
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
Identities = 229/563 (40%), Positives = 355/563 (63%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
++LTDG+L+REA+ DPLL RY ++++DEAHER+++TD+L GLLK++ K RP+L++++ SA
Sbjct: 116 KFLTDGLLIREALVDPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSA 175
Query: 72 TLEAEKFQGYFYGA----------P------LMKVPGRLHPVEIFYTQEPERDYLEAAIR 115
TL+AE+F +F P ++ + GR +P++I Y + P DYL+ A+
Sbjct: 176 TLQAEQFLAFFSSTLGGSRQDREEPQGTIGTIVSLEGRTYPIDILYLESPAEDYLQRAVS 235
Query: 116 TVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQ 175
TV+ +H EP GDILVFLTG +EIE A +++ ++ Q + +PL+S L Q
Sbjct: 236 TVLDVHENEPDGDILVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQM 295
Query: 176 KIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLL 235
IFE RK++ STNIAE S+TI GIVYV+D GF K + YNP+ +E+L
Sbjct: 296 YIFEEAPANT-------RKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLT 348
Query: 236 VSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKL 295
PISKA+A QR+GRAGRT+PGKCFRLYTE+S+ + L PE+ RSNLA +L LK L
Sbjct: 349 AVPISKAAAAQRAGRAGRTKPGKCFRLYTEESYTS-LSDTNIPEVQRSNLAPFILQLKAL 407
Query: 296 GIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLV 354
GID+++HFDF+ PP E + +ALE+L LGALDD LT+ +G +M+E +DP M+K L+
Sbjct: 408 GIDNVLHFDFLTPPPAELMTKALELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLL 467
Query: 355 ESPKYNCSNEILSISAMLSVP-NCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAY- 412
+ + C +E+L+I+AM S + +++ +K + + +F +GDHLT LNVY A+
Sbjct: 468 SAESFGCLSEMLTIAAMTSAGGDVWIQHEGERKQFESRRRKFAAGEGDHLTFLNVYQAFV 527
Query: 413 KQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLK----LCSNDFNSRDYYVN-- 466
+ ++ +C++N +N++ + A ++R QL R + RF ++ L S V
Sbjct: 528 TKGRKESGFCHENLLNYKTMSRAVSIRAQLKRYLERFGIRVDETLASGKTRGASPGVTGE 587
Query: 467 -IRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLT-SRN 523
IR+ + GYF A ++ G + TV+ +H HPS+ + + K +WVI++E + T ++
Sbjct: 588 QIRRCLTTGYFAHAARMQADGTFQTVQGGTTLHAHPSSLMFNRKADWVIFHEVMETGAKT 647
Query: 524 FIRTVTDVRGEWLIDIAPHYYDL 546
FIR ++ V WL++ AP +Y +
Sbjct: 648 FIRDISKVEKCWLLEYAPDFYQV 670
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 967 (345.5 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
Identities = 217/513 (42%), Positives = 310/513 (60%)
Query: 52 GLLK--EVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDY 109
G+LK + K P LKL++MSA+L+A F YF GA + V GR PV+I YT PE DY
Sbjct: 216 GVLKGYQGRKLSP-LKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDY 274
Query: 110 LEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTL 169
++A + T+ QIH E GDILVFLTG++EIE R + + + N+ + + + ++S L
Sbjct: 275 VDATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSAL 334
Query: 170 PPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRV 229
P Q K+F RK++++TNIAETS+TI GI YVIDPGF K + Y+P
Sbjct: 335 PSEQQMKVF-------APAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSK 387
Query: 230 RVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTV 289
+ESL V P SKA QRSGRAGR PGK FRLY E+ F L+ T PEI R NL+N +
Sbjct: 388 GMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEK-LEDSTKPEIKRCNLSNII 446
Query: 290 LTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQ 348
L LK LGIDD+V FDF+D P+ +++AL L+ LGAL DDG L +G +MS PL+P
Sbjct: 447 LQLKALGIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPV 506
Query: 349 MSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNV 408
SK L+ + ++NC E+L A+LSV + F PRE ++ A +K F ++GDHLT L+V
Sbjct: 507 YSKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSV 566
Query: 409 YH-----------AYKQNNEDP---SWCYDNFVNHRALKSADNVRQQLVRIMAR--FNLK 452
Y A NN D WC +N+VN R+LK A ++ +Q+ + + FN+
Sbjct: 567 YRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVS 626
Query: 453 LCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDH-KPEW 511
C ND + R+ + A +F++ A + G Y ++ +VVH+HP++ L KPE
Sbjct: 627 SCGNDM------LAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLFRAKPEC 680
Query: 512 VIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
VI+NE + TS+ +I+ +T + WL ++APH++
Sbjct: 681 VIFNELMQTSKKYIKNLTIIDSLWLSELAPHHF 713
Score = 162 (62.1 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
Identities = 29/50 (58%), Positives = 41/50 (82%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNR 61
+Y+TDG+LLREA+ DP L RY VI++DEAH+R++ TDVL LLK++ + R
Sbjct: 136 KYMTDGLLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTR 185
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 239/544 (43%), Positives = 337/544 (61%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL-----KL 66
++LTDGMLLREA++D LL +Y I+LDEAHERTL TDVLFG++K K R +L K+
Sbjct: 175 KFLTDGMLLREAISDCLLRKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKV 234
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS 126
+VMSAT++ + F YF GAP++ + GR HP++IFYT++P+ DYL AA+ +V QIH PS
Sbjct: 235 LVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQIFYTKQPQHDYLHAALVSVFQIHQEAPS 294
Query: 127 G-DILVFLTGEEEIEDACRKITKEIT-NMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXX 184
DILVFLTG+EEIE A K ++I ++ D + V+PLY++LP A Q ++F+
Sbjct: 295 SHDILVFLTGQEEIE-AMSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAPKG 353
Query: 185 XXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASA 244
RK+++STNIAETS+TI GI YV+D G K K YNP +E L V +SK A
Sbjct: 354 Y-------RKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQA 406
Query: 245 HQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFD 304
QR+GRAGR G C+RLYTE F + T PEI R NLA+ +L L + I +++ FD
Sbjct: 407 WQRTGRAGREDSGICYRLYTEDEFEK-FEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFD 465
Query: 305 FMDPPAPETLMRALEVLNYLGALDD-DGNLT--EMGEKMSEFPLDPQMSKMLVESPKYNC 361
FM P+P+ + A+ L LGAL+ DG LT MG KM+ FPL+P+ +K ++ SPK++C
Sbjct: 466 FMSKPSPDHIQAAIAQLELLGALEHRDGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHC 525
Query: 362 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSW 421
+ EIL+I A+LSV + P + + +F +GDHLTLLNVY +K + W
Sbjct: 526 TEEILTIVALLSVDSILYNPPSRRDEVQSVRKKFVSSEGDHLTLLNVYRTFKNTGGNKEW 585
Query: 422 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 481
C +NFVN + + VR QL I + ++ + S SR +IR+ + F A
Sbjct: 586 CKENFVNSKNMMLVAEVRAQLRDICIKMSMPIVS----SRGDTESIRRCLAHSLFTSTAE 641
Query: 482 LERTGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIA 540
L+ G Y T +Q V +HPS+ L H KP V+Y E + TS+ ++R + V EWL + A
Sbjct: 642 LQPDGSYATTDTHQPVAIHPSSVLFHCKPACVVYTELLFTSKCYMRDLCVVDAEWLYEAA 701
Query: 541 PHYY 544
P ++
Sbjct: 702 PDFF 705
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 229/550 (41%), Positives = 345/550 (62%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+++TDG+LLRE + DPLL +Y +I++DEAHER+ TD+L GLL+++++ R DL+++V SA
Sbjct: 172 KFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSA 231
Query: 72 TLEAEKFQGYFY----G------APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
TL+AE F+ +F G A ++ V GR HPV + +T+ DY ++A+ TV+ IH
Sbjct: 232 TLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIH 291
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXX 181
E GDILVFLTG++E+ED C K+ +E+ + VVP Y LP Q K F+
Sbjct: 292 KHENPGDILVFLTGQDEVEDVCEKL-RELAGNLKNCDRLWVVPCYGALPAREQMKAFDST 350
Query: 182 XXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISK 241
RK+VV+TNIAE S+TI GI YVID G+ K + + VE+L+ +SK
Sbjct: 351 PHGT-------RKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSK 403
Query: 242 ASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLV 301
ASA QR+GRAGR +PGKC+RLY E F + T PEI R +A+T+L LK LG+ ++
Sbjct: 404 ASAEQRAGRAGRIRPGKCYRLYPESEFERFAEG-TVPEIQRCQMASTILQLKALGVQNVH 462
Query: 302 HFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYN 360
F ++ PP ++ LE+L LGA+D+ LT +G +M+EFPL P SK L++S ++
Sbjct: 463 RFHYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFG 522
Query: 361 CSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS 420
CS E+++I AM+ + + F+ P + AD + +F +GDH+T+LNV+ + +N
Sbjct: 523 CSTEMVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKK 582
Query: 421 WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSND--FNSRDYYVNIRKAMLAGYFMQ 478
WC D+FVN+R L ADNVR QLVR++ RF ++ S+ N + NIR+ ++ G+F Q
Sbjct: 583 WCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSE---NIRQCLVTGFFSQ 639
Query: 479 VAHLERTGQYLTVKDNQVVHLHPSNCLDHK---PEWVIYNEYVLTSRNFIRTVTDVRGEW 535
A TG+Y+TVK++ +++ + + K P+WVI+ E + S IR VT + EW
Sbjct: 640 AAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVMQDS---IRDVTVIEPEW 696
Query: 536 LIDIAPHYYD 545
L ++APHYY+
Sbjct: 697 LYELAPHYYE 706
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 230/544 (42%), Positives = 338/544 (62%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL-----KL 66
++LTDGMLLREA++D LL +Y ++LDEAHERT+ TDVLFG++K K R +L K+
Sbjct: 78 KFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKV 137
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS 126
+VMSAT++ + F YF GAP++ + GR HP+++FYT++P+ DYL AA+ +V QIH PS
Sbjct: 138 IVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPS 197
Query: 127 G-DILVFLTGEEEIEDACRKITKEIT-NMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXX 184
DILVFLTG+EEIE A K ++I ++ D + V+PLY++LP A Q ++F+
Sbjct: 198 SQDILVFLTGQEEIE-AMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKG 256
Query: 185 XXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASA 244
RK+++STNIAETS+TI GI YV+D G K K YNP +E L V +SK A
Sbjct: 257 Y-------RKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQA 309
Query: 245 HQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFD 304
QR+GRAGR G C+RLYTE F T PEI R NLA+ +L L + + +++ FD
Sbjct: 310 WQRTGRAGREDSGICYRLYTEDEFEK-FDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFD 368
Query: 305 FMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNC 361
FM P+P+ + A+ L+ LGAL DD LT MG KM+ FPL+P+ +K ++ SPK++C
Sbjct: 369 FMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHC 428
Query: 362 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSW 421
+ EIL+I ++LSV + P ++ + +F +GDH+TLLN+Y +K + W
Sbjct: 429 TEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDW 488
Query: 422 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 481
C +NFVN + + VR QL I + ++ + S SR ++R+ + FM A
Sbjct: 489 CKENFVNSKNMTLVAEVRAQLRDICLKMSMPIAS----SRGDVESVRRCLAHSLFMSTAE 544
Query: 482 LERTGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIA 540
L+ G Y T +Q V +HPS+ L H KP V+Y E + T++ ++R + + +WL + A
Sbjct: 545 LQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAA 604
Query: 541 PHYY 544
P Y+
Sbjct: 605 PEYF 608
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 230/544 (42%), Positives = 338/544 (62%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL-----KL 66
++LTDGMLLREA++D LL +Y ++LDEAHERT+ TDVLFG++K K R +L K+
Sbjct: 168 KFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKV 227
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS 126
+VMSAT++ + F YF GAP++ + GR HP+++FYT++P+ DYL AA+ +V QIH PS
Sbjct: 228 IVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPS 287
Query: 127 G-DILVFLTGEEEIEDACRKITKEIT-NMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXX 184
DILVFLTG+EEIE A K ++I ++ D + V+PLY++LP A Q ++F+
Sbjct: 288 SQDILVFLTGQEEIE-AMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKG 346
Query: 185 XXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASA 244
RK+++STNIAETS+TI GI YV+D G K K YNP +E L V +SK A
Sbjct: 347 Y-------RKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQA 399
Query: 245 HQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFD 304
QR+GRAGR G C+RLYTE F T PEI R NLA+ +L L + + +++ FD
Sbjct: 400 WQRTGRAGREDSGICYRLYTEDEFEK-FDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFD 458
Query: 305 FMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNC 361
FM P+P+ + A+ L+ LGAL DD LT MG KM+ FPL+P+ +K ++ SPK++C
Sbjct: 459 FMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHC 518
Query: 362 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSW 421
+ EIL+I ++LSV + P ++ + +F +GDH+TLLN+Y +K + W
Sbjct: 519 TEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDW 578
Query: 422 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 481
C +NFVN + + VR QL I + ++ + S SR ++R+ + FM A
Sbjct: 579 CKENFVNSKNMTLVAEVRAQLRDICLKMSMPIAS----SRGDVESVRRCLAHSLFMSTAE 634
Query: 482 LERTGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIA 540
L+ G Y T +Q V +HPS+ L H KP V+Y E + T++ ++R + + +WL + A
Sbjct: 635 LQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAA 694
Query: 541 PHYY 544
P Y+
Sbjct: 695 PEYF 698
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 1090 (388.8 bits), Expect = 2.3e-110, P = 2.3e-110
Identities = 232/546 (42%), Positives = 337/546 (61%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL-----KL 66
++LTDGMLLREA++D LL +Y I+LDEAHERT+ TDVLFG++K + R +L K+
Sbjct: 77 KFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQRRRKELRKLPLKV 136
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS 126
+VMSAT++ + F YF GA ++ + GR HP+++FYT++P++DYL AA+ +V QIH PS
Sbjct: 137 IVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQDYLHAALVSVFQIHQEAPS 196
Query: 127 G-DILVFLTGEEEIEDACRKITKEIT-NMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXX 184
DILVFLTG+EEIE A K ++I ++ D + V+PLY++LP A Q ++F+
Sbjct: 197 SQDILVFLTGQEEIE-AVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQGAPKG 255
Query: 185 XXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASA 244
RK++++TNIAETS+TI GI YV+D G K K YNP +E L V +SK A
Sbjct: 256 C-------RKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQA 308
Query: 245 HQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFD 304
QR+GRAGR G C+RLYTE F + T PEI R NLA+ +L L + + +++ FD
Sbjct: 309 WQRAGRAGREDSGICYRLYTENEFEK-FEKMTVPEIQRCNLASVLLQLLAMKVPNVLTFD 367
Query: 305 FMDPPAPETLMRALEVLNYLGALDDDGN---LTEMGEKMSEFPLDPQMSKMLVESPKYNC 361
FM P+P+ + A+ L+ LGAL+ N LT +G KM+ FPL+P+ +K ++ SPK++C
Sbjct: 368 FMSKPSPDHMQAAVAQLDLLGALERKDNQLTLTPIGRKMAAFPLEPKFAKTILLSPKFHC 427
Query: 362 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSW 421
+ EIL+I ++LSV + P + + +F +GDH+TLLN+Y +K D W
Sbjct: 428 TEEILTIVSLLSVDSVLYNPPSRRDEVQAMRKKFLSSEGDHITLLNIYRTFKSLGGDKDW 487
Query: 422 CYDNFVNHRALKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQV 479
C +NFVN R + A VR QL I + ++ + C D S IR+ + FM
Sbjct: 488 CRENFVNSRNMMLAAEVRAQLRDICLKMSMPMVSCRGDVES------IRRCLAHSLFMSA 541
Query: 480 AHLERTGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDVRGEWLID 538
A L+ G Y T Q V +HPS+ L H +P V+Y E + TS+ ++R + V EWL +
Sbjct: 542 AELQPDGTYTTTDSRQPVAIHPSSALFHCRPACVVYTELLHTSKCYMRDLCVVAAEWLYE 601
Query: 539 IAPHYY 544
AP Y+
Sbjct: 602 AAPDYF 607
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 1081 (385.6 bits), Expect = 2.1e-109, P = 2.1e-109
Identities = 225/555 (40%), Positives = 346/555 (62%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY TD ML RE M++P L Y VI+LD+ HER++ATDVL GLLK+VL RP+LKL++ S+
Sbjct: 159 RYCTDDMLQREMMSNPFLGSYGVIILDDIHERSMATDVLLGLLKDVLLARPELKLIINSS 218
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
K Y+ PL++V + HPVE Y +++ E+ +R + +IH GDI+V
Sbjct: 219 PHLINKLSSYYGNVPLIQVKNK-HPVEAVYLSGAQKESFESILRLIFEIHHSGEKGDIVV 277
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FL E++IE A + +E +N+ +G + VVPLY P + +F+
Sbjct: 278 FLACEQDIEKAYEIVCQEGSNLNPDLGELVVVPLY----PKEKCALFKPNDETEKRCPVY 333
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
R++V++ + E+ + + + +VID G ++KVYNPR+R +SL+ PIS++ A R
Sbjct: 334 QRRVVLTASSGESLICSNTVKFVIDVGVERRKVYNPRIRADSLVTQPISQSQAETRKQIL 393
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
+ GK F LY+E+ + D+QP E+ +NL + VL +K++ I L H DFM+ PAP
Sbjct: 394 SASPSGKLFCLYSEEFASRDMQPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAP 453
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
E+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C +E+L+I+AM
Sbjct: 454 ESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAM 513
Query: 372 LSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS-------WCY 423
++ PNCF PR A++AA F H DGDH TL+N+Y AY+ + + WC+
Sbjct: 514 VTAPNCFSHLPRGAEEAALSCWKTFLHPDGDHFTLINIYKAYQDMTLNAASEHCVEKWCH 573
Query: 424 DNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-L 482
D F+N AL++A+ +R +L+ I+ R L F S++ +NI+KA+L+GYFMQ+A +
Sbjct: 574 DYFLNCSALRTAEVIRAELLEIIKRIELPYTEPAFGSKENTLNIKKALLSGYFMQIARDV 633
Query: 483 ERTGQYLTVKDNQVVHLHPSNCLD--HK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 539
+ G YL + QV LHP +C K PEWV+++++ + + N+IRT +++ E + +
Sbjct: 634 DGAGNYLMLTHKQVAQLHPLSCYSVARKMPEWVLFHKFSIANNNYIRTASEIAPELFMQL 693
Query: 540 APHYYDLSNFPQCEA 554
AP YY SN P E+
Sbjct: 694 APQYY-FSNLPPSES 707
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 1081 (385.6 bits), Expect = 2.1e-109, P = 2.1e-109
Identities = 229/544 (42%), Positives = 336/544 (61%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL-----KL 66
++LTDGMLLREA++D LL +Y ++LDEAHERT+ TDVLFG++K K R +L K+
Sbjct: 159 KFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKV 218
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP- 125
+VMSAT++ + F YF AP++ + GR HP++IFYT++P++DYL AA+ +V QIH P
Sbjct: 219 IVMSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPA 278
Query: 126 SGDILVFLTGEEEIEDACRKITKEIT-NMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXX 184
S DILVFLTG+EEIE A K ++I ++ D + V+PLY++LP + Q ++F+
Sbjct: 279 SQDILVFLTGQEEIE-AMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKG 337
Query: 185 XXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASA 244
RK+++STNIAETS+TI GI YV+D G K K YNP +E L V +SK A
Sbjct: 338 Y-------RKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQA 390
Query: 245 HQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFD 304
QR+GRAGR G C+RLYTE F + T PEI R NLA+ +L L + + +++ FD
Sbjct: 391 WQRTGRAGREDSGICYRLYTEDEFEK-FEKMTVPEIQRCNLASVILQLLAMKVPNVLTFD 449
Query: 305 FMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNC 361
FM P+P+ + A+ L+ LGAL DD LT +G KM+ FPL+P+ +K ++ S K++C
Sbjct: 450 FMSKPSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHC 509
Query: 362 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSW 421
+ EIL+I ++LSV + P + + +F +GDH+TLLN+Y +K + W
Sbjct: 510 TEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHITLLNIYRTFKNIGGNKDW 569
Query: 422 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 481
C +NFVN + + VR QL I + ++ + S SR ++R+ M FM A
Sbjct: 570 CKENFVNSKNMLLVAEVRAQLREICLKMSMPIMS----SRGDMESVRRCMAHSLFMNTAE 625
Query: 482 LERTGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIA 540
L+ G Y T +Q V +HPS+ L H KP V+Y + T++ ++R + V EWL + A
Sbjct: 626 LQTDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAA 685
Query: 541 PHYY 544
P Y+
Sbjct: 686 PDYF 689
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 1068 (381.0 bits), Expect = 4.9e-108, P = 4.9e-108
Identities = 223/555 (40%), Positives = 343/555 (61%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY TD ML RE M++P L Y VI+LD+ HER++ATDVL GLLK+VL RP+LKL++ S+
Sbjct: 159 RYCTDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSS 218
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
K Y+ P+++V + HPVE+ Y E ++D E+ +R + +IH GDI+V
Sbjct: 219 PHLISKLNSYYGNVPVIEVKNK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVV 277
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FL E++IE C + + +N+ +G + VVPLY P + +F+
Sbjct: 278 FLACEQDIEKVCETVYQG-SNLNPDLGELVVVPLY----PKEKCSLFKPLDETEKRCQVY 332
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
R++V++T+ E + + + +VID G ++KVYNPR+R SL++ PIS++ A R
Sbjct: 333 QRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQIL 392
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
G + GK F LYTE+ + D+ P E+ +NL + VL +K++ I L H DFM+ PAP
Sbjct: 393 GSSSSGKFFCLYTEEFASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAP 452
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
E+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C +E+L+I+AM
Sbjct: 453 ESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAM 512
Query: 372 LSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS-------WCY 423
++ PNCF P A++AA F H +GDH TL+++Y AY+ + S WC
Sbjct: 513 VTAPNCFSHVPHGAEEAALTCWKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCR 572
Query: 424 DNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-L 482
D F+N AL+ AD +R +L+ I+ R L F S++ +NI+KA+L+GYFMQ+A +
Sbjct: 573 DYFLNCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDV 632
Query: 483 ERTGQYLTVKDNQVVHLHPSN--CLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 539
+ +G YL + QV LHP + + K PEWV+++++ ++ N+IR +++ E + +
Sbjct: 633 DGSGNYLMLTHKQVAQLHPLSGYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQL 692
Query: 540 APHYYDLSNFPQCEA 554
P YY SN P E+
Sbjct: 693 VPQYY-FSNLPPSES 706
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 225/555 (40%), Positives = 344/555 (61%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY TD ML RE M+ P L Y VI+LD+ HER++ATDVL GLLK+VL RP+LKL++ S+
Sbjct: 159 RYCTDDMLQREMMSSPFLGNYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSS 218
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
K Y+ PL++V + HPVE+ Y +++ LE+ +R + +IH GDI+V
Sbjct: 219 PHLISKLSSYYGNVPLIEVK-KQHPVEVVYLSGAQKESLESILRLIFEIHQSGEKGDIVV 277
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FL E++IE A + +E +N+ +G + VVPLY P + +F+
Sbjct: 278 FLACEQDIEKAYEIVCQEGSNLNPDLGELVVVPLY----PKEKCALFKPNDETEKRCQVY 333
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
R++V++ + E+ + + + +VID G ++KVYNPR+R SL+ PIS++ A R
Sbjct: 334 QRRVVLTASSGESLIWSNTVRFVIDVGVERRKVYNPRIRANSLVTQPISQSQAEIRKQIL 393
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
G + GK F LY+E+ + D++P E+ +NL + VL +K++ I L H DFM+ PAP
Sbjct: 394 GSSSSGKLFCLYSEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAP 453
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
E+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C E+L+I+AM
Sbjct: 454 ESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVEEMLTIAAM 513
Query: 372 LSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ----NNED---PSWCY 423
++ PNCF P A++AA F H +GDH TL+N+Y AY+ + D WC+
Sbjct: 514 VTAPNCFSNLPHGAEEAALTCWKTFLHPEGDHFTLINIYKAYQDIALNSTSDHCVEKWCH 573
Query: 424 DNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-L 482
D F+N AL+ AD +R +L+ I+ R L F S++ +NI+KA+L+GYFMQ+A +
Sbjct: 574 DYFLNCCALRMADVIRAELLEIVKRIELPCAEPAFGSKENALNIKKALLSGYFMQIARDV 633
Query: 483 ERTGQYLTVKDNQVVHLHP--SNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 539
+ +G YL + QV LHP S + K PEWV+++++ ++ N+IR +++ E + +
Sbjct: 634 DGSGNYLMLTHKQVAQLHPLSSYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQL 693
Query: 540 APHYYDLSNFPQCEA 554
AP YY SN P E+
Sbjct: 694 APPYY-FSNLPPSES 707
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 225/555 (40%), Positives = 343/555 (61%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY TD ML RE M++P L Y VI+LD+ HER+LATDVL GLLK+VL RP+LKL+V +
Sbjct: 159 RYCTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCS 218
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
L K Y+ P+++V + HPVE+ Y ++D E+ IR + +IH GD++V
Sbjct: 219 PLLTSKLSSYYGDVPVIEVRNK-HPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVV 277
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FL E++IE + +E +N+ VG + V+PLY P + +F
Sbjct: 278 FLACEQDIEKTYELVCQEGSNLNPDVGDLVVIPLY----PKEKCSLFRPVDETEKRCQVY 333
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
R++V++T+ E+ + + +VID G +++VYNPR+R SL++ PIS++ A R
Sbjct: 334 QRRVVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLL 393
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
G + GK F LYTE+ + D++P E+ +NL + VL +K++ I L DFM+ PAP
Sbjct: 394 GSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAP 453
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
E+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C +E+L+I+AM
Sbjct: 454 ESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAM 513
Query: 372 LSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN-----NED--PSWCY 423
++ P+CF+ P A++AA F H +GDH TL+NVY+AY+ NE WC+
Sbjct: 514 VTAPSCFLHVPHGAEEAAVTCWKTFLHPEGDHFTLINVYNAYQDTVLNSANEHCVEMWCH 573
Query: 424 DNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-L 482
D F++ AL+ AD +R +L+ I+ R L F S++ +NI+KA+L+GYFMQ+A +
Sbjct: 574 DCFLSCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQIARDV 633
Query: 483 ERTGQYLTVKDNQVVHLHP--SNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 539
+ +G YL + QV LHP S + K PEWV+++++ ++ N+IR + V E + +
Sbjct: 634 DGSGNYLMLTHKQVAQLHPLSSYSITKKMPEWVLFHQFSISENNYIRVASAVSPELFMQL 693
Query: 540 APHYYDLSNFPQCEA 554
P YY SN P E+
Sbjct: 694 VPQYY-FSNLPPSES 707
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 235/565 (41%), Positives = 355/565 (62%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+T+G+LLRE + DP+L Y I++DEAHER+L TD+L GL K +L R DLKL+V SA
Sbjct: 460 KYMTEGILLREILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVTSA 519
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCE------- 124
T+ A +F +F AP +PGR PVE+F+ ++ DY+E A++ V+ IH+
Sbjct: 520 TMNANRFTKFFGVAPQFHIPGRTFPVEVFFNRDVNMDYVEMAVKQVLTIHLGRWNADNNN 579
Query: 125 -PSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXX 183
GDILVF+TG+E+IE C I KE N+ + P+ + P+YST+P +Q+KIF
Sbjct: 580 ANDGDILVFMTGQEDIEITCDLI-KEKLNLLEDPPPLDIFPIYSTMPQDLQKKIFNKTNL 638
Query: 184 XXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 243
RK+VV+TNIAETSLT+DGI YVID G K KVYNP++ +++L V PIS A+
Sbjct: 639 QR-------RKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLAN 691
Query: 244 AHQRSGRAGRTQPGKCFRLYTEKSFNND-LQPQTYPEILRSNLANTVLTLKKLGIDDLVH 302
A QRSGRAGRT G +RLYTEK+ D + Q PEI RSNL+N +L LK L ++D+
Sbjct: 692 ADQRSGRAGRTGAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINS 751
Query: 303 FDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVES--PKYN 360
F F+DPP + L +L L +GALD+ G LT++G M++FP++P ++K+++ S P+++
Sbjct: 752 FPFLDPPPKDLLNCSLYDLWAIGALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFH 811
Query: 361 CSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN-NEDP 419
CS E+++I AMLSVPN F RP+E AD A+ +F + DHLTLLNV++ + N N+
Sbjct: 812 CSEEVVTIVAMLSVPNIFNRPKERANEADMAREKFIISESDHLTLLNVFNQWNINLNKFK 871
Query: 420 -------SWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAML 472
+WC NF+ ++L A +++ QL+ IM + L + + + +IRK +
Sbjct: 872 GNYTKINNWCNKNFLQLKSLYRAKDIKHQLMLIMKKNKLAILKSKTDD-----DIRKCLC 926
Query: 473 AGYFMQVAHLER---TGQ--YLTVKDNQV-VHLHP-SNCLDHK--PEWVIYNEYVLTSRN 523
A ++ Q A L + GQ ++ ++ + + + LHP S+ LD +VIY+E VLT +
Sbjct: 927 ASFYQQSAKLTKMNLNGQPEFVNLRHSYMKMFLHPTSSLLDSNLSTNYVIYHELVLTKKE 986
Query: 524 FIRTVTDVRGEWLIDIAPHYYDLSN 548
++ VT V WL++ ++ +++
Sbjct: 987 YMNCVTTVDPIWLLEYGYKFFGVAD 1011
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 220/555 (39%), Positives = 343/555 (61%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY TD ML RE M++P L Y VI+LD+ HER+LATDVL GLLK+VL RP+LKL++ +
Sbjct: 166 RYCTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIINCS 225
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
+ Y+ PL++V + HPVE+ Y ++D E+ +R + +IH GD++V
Sbjct: 226 PFLISRLSSYYGNVPLLEVRNK-HPVEVVYLSGAQKDPFESVVRLIFEIHRSGEQGDVVV 284
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FL E++IE + +E +N+ VG + V+PLY P + +F
Sbjct: 285 FLACEQDIEKTYEIVCQEGSNLNPDVGELVVIPLY----PKEKCSLFRPVDETEKRCQAS 340
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
R++V++T+ E+ + + +VID G +++VYNPR+R SL++ PIS++ A R
Sbjct: 341 QRRVVLTTSCGESLIWSHTVRFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLL 400
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
G + GK F LYTE+ + D++P E+ +NL + VL +K++ I L DFM+ PAP
Sbjct: 401 GSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAP 460
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
E+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C +E+L+I+AM
Sbjct: 461 ESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAM 520
Query: 372 LSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN-----NED--PSWCY 423
++ P+CF+ P A++AA F H +GDH TL+N+Y+AY+ NE +WC+
Sbjct: 521 VTAPSCFLHVPHGAEEAAVTCWKTFLHPEGDHFTLINIYNAYQDTVLNSANEHCVETWCH 580
Query: 424 DNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-L 482
+ F++ AL+ AD +R +L+ I+ R L F S++ +NI+KA+L+GYFMQ+A +
Sbjct: 581 NCFLSCSALRMADVIRAELLEIIKRIELPYAEPAFGSQENGLNIKKALLSGYFMQIARDV 640
Query: 483 ERTGQYLTVKDNQVVHLHP--SNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 539
+ +G YL + QV LHP S + K PEWV+++++ ++ N+IR + V E + +
Sbjct: 641 DGSGNYLMLTHKQVAQLHPLSSYAITKKMPEWVLFHQFSISENNYIRVTSAVSPELFMQL 700
Query: 540 APHYYDLSNFPQCEA 554
P YY SN P E+
Sbjct: 701 VPQYY-FSNLPPSES 714
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 707 (253.9 bits), Expect = 3.6e-105, Sum P(2) = 3.6e-105
Identities = 148/363 (40%), Positives = 231/363 (63%)
Query: 193 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 252
RKI++STNI ETS+TID IVYVID G KQK+YNP +ESL+ P SKAS +QR+GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 253 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 312
R + GKCFRL+T+KSF DL + PEI R +++ +L LK LG+DD+++FDF+DPP+P
Sbjct: 863 RKRDGKCFRLFTKKSFI-DLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 313 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESP-KYNCSNEILSISAM 371
+++ LE+L LGAL+D+GNLT G KM+EFP D + SKM++ + KYNC +EIL++++M
Sbjct: 922 VIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASM 981
Query: 372 LS-VPNCFVRPREAQKAADEAKARFGHIDG--DHLTLLNVYHAYKQNNEDPSWCYDNFVN 428
L+ N F + +K A+ K F I+G D L LN+Y ++NN S+CYD+F+
Sbjct: 982 LTHANNIFYVQKGKEKEAENIKKMF-IIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQ 1040
Query: 429 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 488
+ L +V+ QL+ I + ++ + + + + NI+K++++ +F A +
Sbjct: 1041 YHTLIKVKDVKTQLLSICEKIDIPITTCGIENHESINNIKKSIVSAFFTNAALPVNKTEL 1100
Query: 489 LTVKDNQVVHLHPSNCL-------DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAP 541
+K NQVV ++P++ L +++ +I+ E + ++++IR V L IA
Sbjct: 1101 KIIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIAD 1160
Query: 542 HYY 544
Y+
Sbjct: 1161 FYF 1163
Score = 369 (135.0 bits), Expect = 3.6e-105, Sum P(2) = 3.6e-105
Identities = 70/167 (41%), Positives = 112/167 (67%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y+TDGM LR + +P LE V+++DEAHER L TDV+ ++K++ R ++++V+ SAT
Sbjct: 533 YMTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSAT 592
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVF 132
L+AEK YF AP+ VPGR + V+I+YT E +Y+ A + T++QIH+ + GDILVF
Sbjct: 593 LDAEKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHITQGKGDILVF 652
Query: 133 LTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFE 179
L G+ EIE +++ ++ + + + ++P+YS+LP Q +IFE
Sbjct: 653 LPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFE 699
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 707 (253.9 bits), Expect = 3.6e-105, Sum P(2) = 3.6e-105
Identities = 148/363 (40%), Positives = 231/363 (63%)
Query: 193 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 252
RKI++STNI ETS+TID IVYVID G KQK+YNP +ESL+ P SKAS +QR+GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 253 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 312
R + GKCFRL+T+KSF DL + PEI R +++ +L LK LG+DD+++FDF+DPP+P
Sbjct: 863 RKRDGKCFRLFTKKSFI-DLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 313 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESP-KYNCSNEILSISAM 371
+++ LE+L LGAL+D+GNLT G KM+EFP D + SKM++ + KYNC +EIL++++M
Sbjct: 922 VIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASM 981
Query: 372 LS-VPNCFVRPREAQKAADEAKARFGHIDG--DHLTLLNVYHAYKQNNEDPSWCYDNFVN 428
L+ N F + +K A+ K F I+G D L LN+Y ++NN S+CYD+F+
Sbjct: 982 LTHANNIFYVQKGKEKEAENIKKMF-IIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQ 1040
Query: 429 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 488
+ L +V+ QL+ I + ++ + + + + NI+K++++ +F A +
Sbjct: 1041 YHTLIKVKDVKTQLLSICEKIDIPITTCGIENHESINNIKKSIVSAFFTNAALPVNKTEL 1100
Query: 489 LTVKDNQVVHLHPSNCL-------DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAP 541
+K NQVV ++P++ L +++ +I+ E + ++++IR V L IA
Sbjct: 1101 KIIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIAD 1160
Query: 542 HYY 544
Y+
Sbjct: 1161 FYF 1163
Score = 369 (135.0 bits), Expect = 3.6e-105, Sum P(2) = 3.6e-105
Identities = 70/167 (41%), Positives = 112/167 (67%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y+TDGM LR + +P LE V+++DEAHER L TDV+ ++K++ R ++++V+ SAT
Sbjct: 533 YMTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSAT 592
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVF 132
L+AEK YF AP+ VPGR + V+I+YT E +Y+ A + T++QIH+ + GDILVF
Sbjct: 593 LDAEKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHITQGKGDILVF 652
Query: 133 LTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFE 179
L G+ EIE +++ ++ + + + ++P+YS+LP Q +IFE
Sbjct: 653 LPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFE 699
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 219/556 (39%), Positives = 341/556 (61%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY TD ML RE M++P L Y VI+LD+ ER++ATDVL GLLK+VL RP+LKL++ S+
Sbjct: 159 RYCTDDMLQREMMSNPFLGSYGVIILDDVQERSIATDVLLGLLKDVLLARPELKLIINSS 218
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
Y+ PL++V + PVE+ Y +++ LEA +R + +IH GDI+V
Sbjct: 219 PHLISTLSSYYGNVPLIEVTSK-RPVEVVYLSGAQKEALEAVLRLIFEIHHSGEEGDIVV 277
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FL E++IE A + +E TN+ +G + VVPLY P + +F+
Sbjct: 278 FLACEQDIEKAYEIVCQEGTNLNPDLGELVVVPLY----PKEKCALFKPNDEAEKRCQVY 333
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQK-VYNPRVRVESLLVSPISKASAHQRSGR 250
R++V++ + E+ + + + +VID G ++K VY+PR+R +SL++ PIS++ A R
Sbjct: 334 QRRVVLTASSGESLIWSNTVRFVIDVGVERRKKVYSPRIRADSLVLQPISQSQAEMRKQV 393
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
G + GK F LY+E+ + D++P E+ +NL + VL +K++ I L H DFM+ PA
Sbjct: 394 LGSSSSGKLFCLYSEEFASKDMRPLKPAEMQHANLTSMVLFMKRVDIAGLGHCDFMNRPA 453
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PE+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C +E+L+I+A
Sbjct: 454 PESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAA 513
Query: 371 MLSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ---NNEDP----SWC 422
M++ PNCF P A+ A F H +GDH TL+N+Y A++ N+ WC
Sbjct: 514 MVTAPNCFSHLPSGAEAEALTCWKTFLHPEGDHFTLVNLYKAFQDVTLNSTSEHCVEKWC 573
Query: 423 YDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH- 481
+D F+N AL+ AD +R +L+ I+ R L F S++ +NI+KA+L+GYFMQ+A
Sbjct: 574 HDYFLNCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARD 633
Query: 482 LERTGQYLTVKDNQVVHLHPSNCLD---HKPEWVIYNEYVLTSRNFIRTVTDVRGEWLID 538
++ +G YL + QV LHP +C PEWV+++++ ++ N+IR +++ E +
Sbjct: 634 VDGSGNYLMLTHKQVAQLHPLSCYSVTKKMPEWVLFHKFSISENNYIRIASEISPELFMQ 693
Query: 539 IAPHYYDLSNFPQCEA 554
+ P YY SN P E+
Sbjct: 694 LVPQYY-FSNLPPSES 708
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 220/555 (39%), Positives = 341/555 (61%)
Query: 2 SLCFCVLLGGRYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNR 61
S+ C + +++T+G+LLRE + DPLL +Y VI++DEAHER + TD++ GLLK++L+ R
Sbjct: 133 SMSSCTKI--KFMTEGILLREVLADPLLTQYGVIIVDEAHERNMLTDMILGLLKKILRKR 190
Query: 62 PDLKLVVMSATLEAEKFQGYFY----GAPLMK--VPGRLHPVEIFYTQEPERDYLEAAIR 115
LKL++ SAT++A F +F G +K + GR+HPV FY EP DY++ +
Sbjct: 191 SSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFYLNEPCADYVKETVE 250
Query: 116 TVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQ 175
TV ++H EP GDIL FLTG+EE+ +A + +E +Q +KV+P+Y ++ Q
Sbjct: 251 TVWKLHQKEPPGDILAFLTGQEEVLEAL-DLLREYIASSEQEN-LKVLPMYGSMSSTDQL 308
Query: 176 KIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLL 235
+F RK+V++TNIAETS+TI GIVYVID G+ K K YNP+ +SL+
Sbjct: 309 SVF-------FTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLV 361
Query: 236 VSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKL 295
+ P+SKASA QR+GRAGR +PGK +RLYT+ + L P+ PE+ RS L+ +L LK L
Sbjct: 362 IVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEA-LAPRQPPEMRRSELSGAILQLKAL 420
Query: 296 GIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLV 354
GI +++ FDF PP + L+ ALE L L A+D+ GNLT+ +G ++E P +SKML
Sbjct: 421 GIGNILRFDFPSPPPAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLY 480
Query: 355 ESPKYNCSNEILSISAMLSVPNCFVRPREA--QKAADEAKARFGHIDGDHLTLLNVYHAY 412
S + CS EI++I A+L V + F RP A Q++ A +F +GD +T+LN Y +
Sbjct: 481 VSGQMGCSEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEVAEGDFITMLNAYTGF 540
Query: 413 KQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMAR-FNLKLCSNDFNSRDYYVNIRKAM 471
+ +C F+ +R LK A ++R+QL+ + + + + + F+ + + K +
Sbjct: 541 VEEGMTKEFCGQYFLIYRNLKRAHSLREQLITVARKKYGIPI----FSCKGDVEKLCKCI 596
Query: 472 LAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDHKPE--WVIYNEYVLTSRNFIRTVT 529
AG+F QVA+L +G Y + + +HP++ L P+ +V+Y E + T++ F+ VT
Sbjct: 597 TAGFFTQVAYLHHSGVYRQISSGTELAIHPNSTLYTLPQAQYVVYGELLQTTKLFMNYVT 656
Query: 530 DVRGEWLIDIAPHYY 544
++ EWL ++APHYY
Sbjct: 657 VIKREWLTELAPHYY 671
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 1008 (359.9 bits), Expect = 1.1e-101, P = 1.1e-101
Identities = 224/539 (41%), Positives = 329/539 (61%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE +TD L +Y I++DEAHERTLATD+L GLLK++L RP LKL++ SA
Sbjct: 320 KYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSA 379
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDIL 130
T+ A+KF +F P+ VPGR +PV+I YT +PE +Y+ AAI T+ QIH + GDIL
Sbjct: 380 TMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDIL 439
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
VFLTG+EEIE K+ + ++ +G + + + P+Y+ LP Q KIF+
Sbjct: 440 VFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENC----- 494
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+V++TNIAETSLTIDGI YVIDPGF K+ Y P + LL P S+AS QR+GR
Sbjct: 495 --RKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGR 552
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGR PGKCFR++T+ S+ ++L+ PEI R+NL+NTVL L LG+ DL+ F MD P+
Sbjct: 553 AGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPS 612
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYN-CSN---EIL 366
TL ++LE L LGAL+ G +T +G+ M EFP +P+ +K+L + + C E L
Sbjct: 613 IPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECL 672
Query: 367 SISAML-SVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDN 425
+I +ML P+ F+ QK D A + ++ DH+ L +++ ++ + SWC D+
Sbjct: 673 TIVSMLHETPSLFI----GQKR-DAAASVLSEVESDHILYLEIFNQWRNSKFSRSWCQDH 727
Query: 426 FVNHRALKSADNVRQQLVRIMARFNLKLCSND-----FNSRDYYVNIR--KAMLAGYFMQ 478
+ + + N+R QL R + L + ND + Y+N R + ++G+ M
Sbjct: 728 KIQFKTMLRVRNIRNQLFRCSEKVGL-VEKNDQARMKIGNIAGYINARITRCFISGFPMN 786
Query: 479 VAHLERTGQYLTVKDNQV---VHLHPSNCL--DHK-----P-EWVIYNEYVLTSRNFIR 526
+ L TG Y T+ + V +HP++ L +HK P ++V+Y + +LTS+ FIR
Sbjct: 787 IVQLGPTG-YQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIR 844
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
Identities = 212/545 (38%), Positives = 345/545 (63%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRP-DLKLVVMS 70
+YLTDG+LLRE++++P+L+ Y VI+LDEAHER+L TD+L GL+K +++ R + K+++ S
Sbjct: 98 KYLTDGVLLRESLSNPMLDDYSVIILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITS 157
Query: 71 ATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDIL 130
ATL+ EK +F G P++ VPG+L+PVEI Y++E Y+E++++ + IH+ EP GDIL
Sbjct: 158 ATLDGEKVSEFFSGCPVLNVPGKLYPVEILYSKERPVSYIESSLKVAIDIHVREPEGDIL 217
Query: 131 VFLTGEEEIEDACRKITKEITNMGD-QVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 189
+F+TG+++IE ++ +++ ++ + + PL+ +LPP MQ ++F
Sbjct: 218 IFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNC---- 273
Query: 190 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 249
R+ +VSTNIAETSLT+DG+VYVID G+ KQ+ YNP + SL V ISK A+QR+G
Sbjct: 274 ---RRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAG 330
Query: 250 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDL--VHFDFMD 307
RAGRT+PGKC+RLY + +D T PEI R++LA +VL LK L + D+ + FDF+D
Sbjct: 331 RAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLD 390
Query: 308 PPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILS 367
P+ E+L AL+ L ++ A+D++G +T +G MS+ PL+P +S+ L+E+ + C ++ L+
Sbjct: 391 APSSESLEDALKQLYFIDAIDENGAITRIGRTMSDLPLEPSLSRTLIEANETGCLSQALT 450
Query: 368 ISAMLSVPNCFV----RPREAQKAADE-AKARFGHIDGDHLTLLNVYHAYKQNNEDPSWC 422
+ AMLS + +P E ++ DE + G GDH+ LL ++ ++ + N DP WC
Sbjct: 451 VVAMLSAETTLLPARSKPSEKKRKHDEDSNLPNGSGYGDHIQLLQIFESWDRTNYDPVWC 510
Query: 423 YDNFVNHRALKSADNVRQQLVRIMARFN---LKLCSND--FNSRDYYVNIRKAMLAGYFM 477
+N + R + +VR+QL +IM + + L++ ++ +SRD Y +RKA+ G
Sbjct: 511 KENGMQVRGMVFVKDVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNAN 570
Query: 478 QVAH-LERTGQYLTVK-DNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEW 535
Q+A + R Y T+ +Q+V +HPS+ L + ++ N YV+ T +R
Sbjct: 571 QIAERMLRHNGYRTLSFQSQLVQVHPSSVLSADNDGMMPN-YVVYHELISTTRPFMRNVC 629
Query: 536 LIDIA 540
+D+A
Sbjct: 630 AVDMA 634
Score = 211 (79.3 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 56/173 (32%), Positives = 96/173 (55%)
Query: 380 RPREAQKAADE-AKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNV 438
+P E ++ DE + G GDH+ LL ++ ++ + N DP WC +N + R + +V
Sbjct: 467 KPSEKKRKHDEDSNLPNGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDV 526
Query: 439 RQQLVRIMARFN---LKLCSND--FNSRDYYVNIRKAMLAGYFMQVAH-LERTGQYLTVK 492
R+QL +IM + + L++ ++ +SRD Y +RKA+ G Q+A + R Y T+
Sbjct: 527 RRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLS 586
Query: 493 -DNQVVHLHPSNCL--DHK---PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 539
+Q+V +HPS+ L D+ P +V+Y+E + T+R F+R V V W+ I
Sbjct: 587 FQSQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAWVAPI 639
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 213/531 (40%), Positives = 324/531 (61%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LL E DPLLERY +++LDE HERTL+TD+L G+LK +L+ R D +LV+ SA
Sbjct: 120 KYMTDGILLNEIFFDPLLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSA 179
Query: 72 TLEAEKFQGYFYGAPL--MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 129
+++A K +F + M + G+L PVE + Q+P +Y+++AI TV+ I+ P GDI
Sbjct: 180 SVDANKLSQFFGQDKVCTMSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDI 239
Query: 130 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 189
LVFL+G +EIE +KI + + + + +PL++ L Q ++F
Sbjct: 240 LVFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDF---- 295
Query: 190 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 249
RK++ STNIAETS+TIDGIVYV+D GF KQ++YNP R L+ PISK+SA QRSG
Sbjct: 296 ---RKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSG 352
Query: 250 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 309
RAGRT GK FRLYTEK+++ ++ + +IL +++ VL LK LG+ +++ F F P
Sbjct: 353 RAGRTMRGKVFRLYTEKAYSL-MKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRP 411
Query: 310 APETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 368
LM ALE L LG LD+ GNLT+ +G ++S LD +SK L+ S ++ C++EILSI
Sbjct: 412 PTVHLMAALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSI 471
Query: 369 SAMLSVPNCFVRPREAQKA-ADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFV 427
+++L+ F P + K A A + F +GD +T LNV+ ++ N +D WC N++
Sbjct: 472 ASILTAGEVFYNPTSSSKNDAFVAHSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYL 531
Query: 428 NHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQ 487
N++ L+ A ++R LVR + +F++ S D I K +L G+ VAHL+ G
Sbjct: 532 NYQTLRQALDIRTHLVRFLNKFSIPTAQR-LPSSDCS-KILKCLLDGFVRNVAHLQNDGS 589
Query: 488 YLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRN-FIRTVTDVRGEWL 536
Y T+ QV L S+ L + K W++Y+ V + F++ ++ + WL
Sbjct: 590 YKTIGGKQV-WLDSSSVLHEKKTPWIMYSSAVESETQIFVKNISKIESFWL 639
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 971 (346.9 bits), Expect = 9.4e-98, P = 9.4e-98
Identities = 220/573 (38%), Positives = 348/573 (60%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV-LKNRP-----DLK 65
+Y+TDG LLR + DPLL +Y +I+LDEAHER+L+TD+LFGLLK++ L+N+P ++K
Sbjct: 95 KYMTDGCLLRHILADPLLSKYSIIILDEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMK 154
Query: 66 LVVMSATLEAEKFQGYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQ 119
+VVMSATLE +K +F ++ +PGR +PV EIF RD Y+ A++ +
Sbjct: 155 VVVMSATLEVDKLSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGSSAYVTEAVKVTLD 214
Query: 120 IHMCEPSGDILVFLTGEEEIEDACRKITKEITNMG------DQ-VGPVKVVPLYSTLPPA 172
IH+ EP GDILVFLTG+ EIE AC + K+ ++ D+ + + ++PLY ++
Sbjct: 215 IHLNEPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYGSMSTD 274
Query: 173 MQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVE 232
Q++IF RK VVSTNIA TSLTI+G+ YV+D GF KQ +NPRV ++
Sbjct: 275 QQKRIF-------LPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLD 327
Query: 233 SLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTL 292
L V PISK+ A QR+GRAGRT GK +RLY+ + + + T PEI R++L + +LTL
Sbjct: 328 ILEVVPISKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTL 387
Query: 293 KKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD--GNLTEMGEKMSEFPLDPQMS 350
K L + D++ F ++D P ++ AL+ L A+D G++T +GE + +FPL P +S
Sbjct: 388 KCLSVHDVIRFPYLDRPEERHILEALKQLYQCDAIDRTRRGHVTRLGEFLVQFPLPPNLS 447
Query: 351 KMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAAD------EAKARFGHIDGDHLT 404
++++ +C + +L I+AMLSV N F+RP + QK + E ++ G + D T
Sbjct: 448 CAVIKAASLDCEDMLLPIAAMLSVENVFIRPGDPQKQKEAELQHQELSSQVGGCN-DFAT 506
Query: 405 LLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYY 464
LLN++ K + +WC+ +++ RA+KSA +V +QL I ++ LK DF +
Sbjct: 507 LLNIFEQCKASKSPSAWCHKYWIHWRAVKSALSVEKQLREITSK--LKQLP-DFPKETFE 563
Query: 465 VN----IRKAMLAGYFMQVAHLERTGQYLTVKDN-QVVHLHPSNCL---DHKPEWVIYNE 516
+ +R+ + AGYF+ VA + T+ + +V++HPS+ L + + EW+I+++
Sbjct: 564 GSRTELLRRCLCAGYFINVARRSAARTFCTMDGHGSIVYIHPSSTLYNQETRLEWIIFHD 623
Query: 517 YVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNF 549
+TS+ ++RTV VR EW+ D+ P + + +
Sbjct: 624 VTVTSKIYVRTVCPVRYEWVKDLLPRLHQIDAY 656
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
Identities = 217/542 (40%), Positives = 325/542 (59%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNR-----PDLKL 66
R+LTDG+LLRE++ D LL +Y VI+LDEAHERT+ D+LFG++K+ K R +LK+
Sbjct: 162 RFLTDGVLLRESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKV 221
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS 126
VV SAT++ + F YF M + GR +PV + +T+E DY+ + T+ IH P
Sbjct: 222 VVTSATMDIDHFGNYF-NCKGMYLEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPK 280
Query: 127 G-DILVFLTGEEEIEDACRKITKEITNMGDQVGP--VKVVPLYSTLPPAMQQKIFEXXXX 183
D+L+FLTG+EEIE ++I +++ + D G ++V LY+ L Q + F
Sbjct: 281 NHDVLIFLTGQEEIESLAQQI-RQLAKI-DTTGTTDLRVFTLYAQLSQGKQLECF----- 333
Query: 184 XXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 243
RK++++TNIAETS+TI GI VID GF K+K +N ++ L ISKA
Sbjct: 334 --VPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQ 391
Query: 244 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 303
A QR+GRAGR G C+R YT+ ++ T PEILR+N + VL L L ID +F
Sbjct: 392 AWQRAGRAGRDADGTCYRAYTKAEMDS-FADATQPEILRTNPTSMVLQLLALDID-CNNF 449
Query: 304 DFMDPPAPETLMRALEVLNYLGALD--DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNC 361
DF+DPP + L A + L+ LGA+ DD +T +G +M ++PLDP+ SK+L+ + + C
Sbjct: 450 DFLDPPLEDGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGC 509
Query: 362 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSW 421
EILS+ ++LS + FV E + A A A+F GDHLTLLNV++ + ++ + W
Sbjct: 510 MEEILSLVSVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMW 569
Query: 422 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 481
C+DN++N R+L A NVR+QL I +L L NS D ++K +L G+F +A
Sbjct: 570 CHDNYLNLRSLTYARNVRRQLREISEHLHLAL-----NSSDDIEMLKKCILNGFFENIAV 624
Query: 482 LERTGQYLTVKDNQVVHLHPSNCLD--HKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 539
L+R G Y+T N +HPS+ L +KP ++++ E V T + F+R VT++ EW+ ++
Sbjct: 625 LQRDGFYITASGNIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEV 684
Query: 540 AP 541
P
Sbjct: 685 VP 686
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
Identities = 222/568 (39%), Positives = 342/568 (60%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKE-VLK----NRPDLKL 66
+Y+TDG LLRE + DP L +Y +++LDEAHER+L TDVL GLLK+ +LK N+ LK+
Sbjct: 112 KYMTDGCLLREILADPSLTQYSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKV 171
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQI 120
VVMSATLE EK ++ P+ +PGR +PV E F +D Y++ ++ + +
Sbjct: 172 VVMSATLETEKLSSFYGNCPVFTIPGRTYPVKETFCNLIGPKDKESSVYVKEVVKMTLDV 231
Query: 121 HMCEPSGDILVFLTGEEEIEDACRKITK--EITN----MGDQ-VGPVKVVPLYSTLPPAM 173
H E +GDILVFLTG+ EIE AC + + EI + + D+ V + ++ LY ++P
Sbjct: 232 HTNEAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDGLLILSLYGSMPTDQ 291
Query: 174 QQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVES 233
Q++IF+ RK VV+TNIA TSLTIDGI Y++D GF KQ +N RV ++
Sbjct: 292 QRQIFQPAPKGV-------RKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDI 344
Query: 234 LLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLANTVLTL 292
L V PISK+ A QR+GRAGRT GKCFR+Y+ K F + P+ T PEI R++L + +LTL
Sbjct: 345 LEVVPISKSEAQQRAGRAGRTAAGKCFRIYS-KDFWDTCMPEYTIPEIQRTSLTSVILTL 403
Query: 293 KKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKM 352
K LG+ D++ F ++D P ++ AL+ L A+D G +T++G M EFPL P +++
Sbjct: 404 KCLGVHDVIRFPYLDCPEERFILTALKQLYQYDAIDRRGEVTKLGRLMVEFPLPPNLTRA 463
Query: 353 LVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHI------DGDHLTLL 406
L+++ C + +L ++AMLSV N F+RP + +K EA+ R I D L LL
Sbjct: 464 LLKAAALGCEDIMLPVAAMLSVENIFIRPGKPEKQK-EAEVRHKEIAACSGGSNDFLMLL 522
Query: 407 NVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVN 466
V+ + + +WC +N+++ RA+KSA +V QL I+ R LK DF + +
Sbjct: 523 CVFEKCRASENPSAWCKENWIHWRAVKSAFSVETQLREILLR--LKQ-QKDFPHERFEGS 579
Query: 467 ----IRKAMLAGYFMQVAHLERTGQYLTVKDN-QVVHLHPSNCL---DHKPEWVIYNEYV 518
+R+ + GYF VA + T+ + V +HPS+CL + + +W+I+++ +
Sbjct: 580 RSELLRQCLCLGYFTNVARRSIGKSFCTMDGHGSSVLIHPSSCLFGQELQLDWIIFHDVL 639
Query: 519 LTSRNFIRTVTDVRGEWLIDIAPHYYDL 546
+TSR ++RTV +R +W+ D+ P +++
Sbjct: 640 VTSRVYVRTVCPIRYDWVKDLLPKLHEI 667
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 636 (228.9 bits), Expect = 6.1e-95, Sum P(2) = 6.1e-95
Identities = 142/368 (38%), Positives = 217/368 (58%)
Query: 193 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 252
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 291 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 350
Query: 253 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 312
RT GKCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 351 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 410
Query: 313 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 372
++ AL+ L A+D G++T +G M EFPL P ++ ++++ +C + +L I+AML
Sbjct: 411 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 470
Query: 373 SVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNF 426
SV N F+RP E QK A+ E A+ G + D TL ++ K + SWC ++
Sbjct: 471 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHW 529
Query: 427 VNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYVNIRKAMLAGYFMQVAHLER 484
++ R L SA V QL ++ + + F + V +R+ + AGYF VA
Sbjct: 530 IHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEV-LRRCLCAGYFKNVAR-RS 587
Query: 485 TGQYLTVKDNQ--VVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 539
G+ D + VH+HPS+ L + K EW+I++E ++T++ + R V +R EW+ D+
Sbjct: 588 VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDL 647
Query: 540 APHYYDLS 547
P ++ +
Sbjct: 648 LPKLHEFN 655
Score = 328 (120.5 bits), Expect = 6.1e-95, Sum P(2) = 6.1e-95
Identities = 70/143 (48%), Positives = 97/143 (67%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKL 66
+Y+TDG LL+ + DP L ++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+
Sbjct: 48 KYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKV 107
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQI 120
VVMSAT+E K +F P+ +PGRL+PV E F RD Y++A ++ + I
Sbjct: 108 VVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDI 167
Query: 121 HMCEPSGDILVFLTGEEEIEDAC 143
H+ E +GDILVFLTG+ EIE +C
Sbjct: 168 HLNEMAGDILVFLTGQFEIEKSC 190
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 219/567 (38%), Positives = 334/567 (58%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKL 66
+Y+TDG LL+ + DP L ++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+
Sbjct: 147 KYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKV 206
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQI 120
VVMSAT+E K +F P+ +PGRL+PV E F RD Y++A ++ + I
Sbjct: 207 VVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDI 266
Query: 121 HMCEPSGDILVFLTGEEEIEDACR---KITKEIT---NMGDQ-VGPVKVVPLYSTLPPAM 173
H+ E +GDILVFLTG+ EIE +C ++ + + ++ D + + ++P Y ++
Sbjct: 267 HLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQ 326
Query: 174 QQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVES 233
Q++IF RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++
Sbjct: 327 QRRIF-------LPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 234 LLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 293
L V PISK+ A QRSGRAGRT GKCFR+Y++ +N + PEI R++L + VLTLK
Sbjct: 380 LEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 294 KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKML 353
L I D++ F ++DPP ++ AL+ L A+D G++T +G M EFPL P ++ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 354 VESPKYNCSNEILSISAMLSVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLN 407
+ + +C + +L I+AMLSV N F+RP E QK A+ E A+ G + D TL
Sbjct: 500 IRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFN-DFATLAV 558
Query: 408 VYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYV 465
++ K + SWC ++++ R L SA V QL ++ + + F + V
Sbjct: 559 IFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEV 618
Query: 466 NIRKAMLAGYFMQVAHLERTGQYLTVKDNQ--VVHLHPSNCL---DHKPEWVIYNEYVLT 520
+R+ + AGYF VA G+ D + VH+HPS+ L + K EW+I++E ++T
Sbjct: 619 -LRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVT 676
Query: 521 SRNFIRTVTDVRGEWLIDIAPHYYDLS 547
++ + R V +R EW+ D+ P ++L+
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHELN 703
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 218/567 (38%), Positives = 334/567 (58%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKL 66
+Y+TDG LL+ + DP L ++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+
Sbjct: 70 KYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKV 129
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQI 120
VVMSAT+E K +F P+ +PGRL+PV E F RD Y++A ++ + I
Sbjct: 130 VVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDI 189
Query: 121 HMCEPSGDILVFLTGEEEIEDACR---KITKEIT---NMGDQ-VGPVKVVPLYSTLPPAM 173
H+ E +GDILVFLTG+ EIE +C ++ + + ++ D + + ++P Y ++
Sbjct: 190 HLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQ 249
Query: 174 QQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVES 233
Q++IF RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++
Sbjct: 250 QRRIF-------LPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 302
Query: 234 LLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 293
L V PISK+ A QRSGRAGRT GKCFR+Y++ +N + PEI R++L + VLTLK
Sbjct: 303 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 362
Query: 294 KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKML 353
L I D++ F ++DPP ++ AL+ L A+D G++T +G M EFPL P ++ +
Sbjct: 363 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 422
Query: 354 VESPKYNCSNEILSISAMLSVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLN 407
+++ +C + +L I+AMLSV N F+RP E QK A+ E A+ G + D TL
Sbjct: 423 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAV 481
Query: 408 VYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYV 465
++ K + SWC ++++ R L SA V QL ++ + + F + V
Sbjct: 482 IFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEV 541
Query: 466 NIRKAMLAGYFMQVAHLERTGQYLTVKDNQ--VVHLHPSNCL---DHKPEWVIYNEYVLT 520
+R+ + AGYF VA G+ D + VH+HPS+ L + K EW+I++E ++T
Sbjct: 542 -LRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVT 599
Query: 521 SRNFIRTVTDVRGEWLIDIAPHYYDLS 547
++ + R V +R EW+ D+ P ++ +
Sbjct: 600 TKVYARIVCPIRYEWVRDLLPKLHEFN 626
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 218/567 (38%), Positives = 334/567 (58%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKL 66
+Y+TDG LL+ + DP L ++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+
Sbjct: 147 KYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKV 206
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQI 120
VVMSAT+E K +F P+ +PGRL+PV E F RD Y++A ++ + I
Sbjct: 207 VVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDI 266
Query: 121 HMCEPSGDILVFLTGEEEIEDACR---KITKEIT---NMGDQ-VGPVKVVPLYSTLPPAM 173
H+ E +GDILVFLTG+ EIE +C ++ + + ++ D + + ++P Y ++
Sbjct: 267 HLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQ 326
Query: 174 QQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVES 233
Q++IF RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++
Sbjct: 327 QRRIF-------LPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 234 LLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 293
L V PISK+ A QRSGRAGRT GKCFR+Y++ +N + PEI R++L + VLTLK
Sbjct: 380 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 294 KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKML 353
L I D++ F ++DPP ++ AL+ L A+D G++T +G M EFPL P ++ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 354 VESPKYNCSNEILSISAMLSVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLN 407
+++ +C + +L I+AMLSV N F+RP E QK A+ E A+ G + D TL
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAV 558
Query: 408 VYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYV 465
++ K + SWC ++++ R L SA V QL ++ + + F + V
Sbjct: 559 IFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEV 618
Query: 466 NIRKAMLAGYFMQVAHLERTGQYLTVKDNQ--VVHLHPSNCL---DHKPEWVIYNEYVLT 520
+R+ + AGYF VA G+ D + VH+HPS+ L + K EW+I++E ++T
Sbjct: 619 -LRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVT 676
Query: 521 SRNFIRTVTDVRGEWLIDIAPHYYDLS 547
++ + R V +R EW+ D+ P ++ +
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHEFN 703
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 218/567 (38%), Positives = 334/567 (58%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKL 66
+Y+TDG LL+ + DP L ++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+
Sbjct: 147 KYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKV 206
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQI 120
VVMSAT+E K +F P+ +PGRL+PV E F RD Y++A ++ + I
Sbjct: 207 VVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDI 266
Query: 121 HMCEPSGDILVFLTGEEEIEDACR---KITKEIT---NMGDQ-VGPVKVVPLYSTLPPAM 173
H+ E +GDILVFLTG+ EIE +C ++ + + ++ D + + ++P Y ++
Sbjct: 267 HLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQ 326
Query: 174 QQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVES 233
Q++IF RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++
Sbjct: 327 QRRIF-------LPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 234 LLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 293
L V PISK+ A QRSGRAGRT GKCFR+Y++ +N + PEI R++L + VLTLK
Sbjct: 380 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 294 KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKML 353
L I D++ F ++DPP ++ AL+ L A+D G++T +G M EFPL P ++ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 354 VESPKYNCSNEILSISAMLSVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLN 407
+++ +C + +L I+AMLSV N F+RP E QK A+ E A+ G + D TL
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAV 558
Query: 408 VYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYV 465
++ K + SWC ++++ R L SA V QL ++ + + F + V
Sbjct: 559 IFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEV 618
Query: 466 NIRKAMLAGYFMQVAHLERTGQYLTVKDNQ--VVHLHPSNCL---DHKPEWVIYNEYVLT 520
+R+ + AGYF VA G+ D + VH+HPS+ L + K EW+I++E ++T
Sbjct: 619 -LRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVT 676
Query: 521 SRNFIRTVTDVRGEWLIDIAPHYYDLS 547
++ + R V +R EW+ D+ P ++ +
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHEFN 703
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 218/567 (38%), Positives = 334/567 (58%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKL 66
+Y+TDG LL+ + DP L ++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+
Sbjct: 225 KYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKV 284
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQI 120
VVMSAT+E K +F P+ +PGRL+PV E F RD Y++A ++ + I
Sbjct: 285 VVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDI 344
Query: 121 HMCEPSGDILVFLTGEEEIEDACR---KITKEIT---NMGDQ-VGPVKVVPLYSTLPPAM 173
H+ E +GDILVFLTG+ EIE +C ++ + + ++ D + + ++P Y ++
Sbjct: 345 HLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQ 404
Query: 174 QQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVES 233
Q++IF RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++
Sbjct: 405 QRRIF-------LPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 457
Query: 234 LLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 293
L V PISK+ A QRSGRAGRT GKCFR+Y++ +N + PEI R++L + VLTLK
Sbjct: 458 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 517
Query: 294 KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKML 353
L I D++ F ++DPP ++ AL+ L A+D G++T +G M EFPL P ++ +
Sbjct: 518 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 577
Query: 354 VESPKYNCSNEILSISAMLSVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLN 407
+++ +C + +L I+AMLSV N F+RP E QK A+ E A+ G + D TL
Sbjct: 578 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAV 636
Query: 408 VYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYV 465
++ K + SWC ++++ R L SA V QL ++ + + F + V
Sbjct: 637 IFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEV 696
Query: 466 NIRKAMLAGYFMQVAHLERTGQYLTVKDNQ--VVHLHPSNCL---DHKPEWVIYNEYVLT 520
+R+ + AGYF VA G+ D + VH+HPS+ L + K EW+I++E ++T
Sbjct: 697 -LRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVT 754
Query: 521 SRNFIRTVTDVRGEWLIDIAPHYYDLS 547
++ + R V +R EW+ D+ P ++ +
Sbjct: 755 TKVYARIVCPIRYEWVRDLLPKLHEFN 781
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 218/567 (38%), Positives = 334/567 (58%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKL 66
+Y+TDG LL+ + DP L ++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+
Sbjct: 147 KYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKV 206
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQI 120
VVMSAT+E K +F P+ +PGRL+PV E F RD Y++A ++ + I
Sbjct: 207 VVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDI 266
Query: 121 HMCEPSGDILVFLTGEEEIEDACR---KITKEIT---NMGDQ-VGPVKVVPLYSTLPPAM 173
H+ E +GDILVFLTG+ EIE +C ++ + + ++ D + + ++P Y ++
Sbjct: 267 HLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQ 326
Query: 174 QQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVES 233
Q++IF RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++
Sbjct: 327 QRRIF-------LPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 234 LLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 293
L V PISK+ A QRSGRAGRT GKCFR+Y++ +N + PEI R++L + VLTLK
Sbjct: 380 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 294 KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKML 353
L I D++ F ++DPP ++ AL+ L A+D G++T +G M EFPL P ++ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 354 VESPKYNCSNEILSISAMLSVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLN 407
+++ +C + +L I+AMLSV N F+RP E QK A+ E A+ G + D TL
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAV 558
Query: 408 VYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYV 465
++ K + SWC ++++ R L SA V QL ++ + + F + V
Sbjct: 559 IFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEV 618
Query: 466 NIRKAMLAGYFMQVAHLERTGQYLTVKDNQ--VVHLHPSNCL---DHKPEWVIYNEYVLT 520
+R+ + AGYF VA G+ D + VH+HPS+ L + K EW+I++E ++T
Sbjct: 619 -LRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVT 676
Query: 521 SRNFIRTVTDVRGEWLIDIAPHYYDLS 547
++ + R V +R EW+ D+ P ++ +
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHEFN 703
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 218/567 (38%), Positives = 335/567 (59%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKL 66
+Y+TDG LL+ + DP L ++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+
Sbjct: 147 KYMTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKV 206
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQI 120
VVMSAT+E K +F P+ +PGRL+PV E F RD Y++A ++ + I
Sbjct: 207 VVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDI 266
Query: 121 HMCEPSGDILVFLTGEEEIEDACR---KITKEIT---NMGDQ-VGPVKVVPLYSTLPPAM 173
H+ E +GDILVFLTG+ EIE +C ++ + + ++ D + + ++P Y ++
Sbjct: 267 HLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQ 326
Query: 174 QQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVES 233
Q++IF RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++
Sbjct: 327 QRRIF-------LPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 234 LLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 293
L V PISK+ A QRSGRAGRT GKCFR+Y+++ ++ + PEI R++L + VLTLK
Sbjct: 380 LEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 294 KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKML 353
L I D++ F ++DPP ++ AL+ L A+D G++T +G M EFPL P ++ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 354 VESPKYNCSNEILSISAMLSVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLN 407
+ + +C + +L I+AMLSV N F+RP E QK A+ E A+ G + D TL
Sbjct: 500 IRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAV 558
Query: 408 VYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYV 465
++ K + SWC ++++ R L SA V QL ++ + + F + V
Sbjct: 559 IFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEV 618
Query: 466 NIRKAMLAGYFMQVAHLERTGQYLTVKDNQ--VVHLHPSNCL---DHKPEWVIYNEYVLT 520
+R+ + AGYF VA G+ D + VH+HPS+ L + K EW+I++E ++T
Sbjct: 619 -LRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVT 676
Query: 521 SRNFIRTVTDVRGEWLIDIAPHYYDLS 547
++ + R V +R EW+ D+ P ++L+
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHELN 703
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 520 (188.1 bits), Expect = 1.3e-93, Sum P(2) = 1.3e-93
Identities = 100/213 (46%), Positives = 149/213 (69%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ + L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKLVV SA
Sbjct: 632 KYMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSA 691
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++A+KF +F P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDILV
Sbjct: 692 TMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILV 751
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
F+ G+E+IE +I + + + ++ + V+P+YS LP +Q KIF+
Sbjct: 752 FMPGQEDIEVTSEQIVEHLEEL-EKAPALAVLPIYSQLPSDLQAKIFQKAPDGV------ 804
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKV 224
RK +V+TNIAETSLT+DGI++VID G+ K KV
Sbjct: 805 -RKCIVATNIAETSLTVDGIMFVIDSGYCKLKV 836
Score = 453 (164.5 bits), Expect = 1.3e-93, Sum P(2) = 1.3e-93
Identities = 95/254 (37%), Positives = 148/254 (58%)
Query: 300 LVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKY 359
L+ F + PA L AL +L + G G LT G +M EFPLDP +SKML+ S
Sbjct: 851 LIEF-YGSEPAFHWLQSAL-LLPFSGGFIPPGGLTSTGRQMVEFPLDPALSKMLIVSCDM 908
Query: 360 NCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP 419
CS+EIL I +MLSVP F RP+ ++ +D+ + +F + DHLT LNVY +K NN
Sbjct: 909 GCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNNYST 968
Query: 420 SWCYDNFVNHRALKSADNVRQQLVRIMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFM 477
WC +F++ +A++ VR QL IM R +L C D++ +RK + A YF
Sbjct: 969 LWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDV------VRKCICAAYFH 1022
Query: 478 QVAHLERTGQYLTVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGE 534
Q A L+ G+Y+ ++ HLHP++ L + P++++Y+E V+T++ +++ VT V GE
Sbjct: 1023 QAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGE 1082
Query: 535 WLIDIAPHYYDLSN 548
WL ++ P +Y + +
Sbjct: 1083 WLAELGPMFYSIKH 1096
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
Identities = 218/568 (38%), Positives = 332/568 (58%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKL 66
+Y+TDG LL+ + DP L ++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+
Sbjct: 147 KYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKV 206
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQI 120
VVMSAT+E K +F P+ +PGRL+PV E F RD Y++A ++ + I
Sbjct: 207 VVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDI 266
Query: 121 HMCEPSGDILVFLTGEEEIEDACR---KITKEIT---NMGDQ-VGPVKVVPLYSTLPPAM 173
H+ E +GDILVFLTG+ EIE +C ++ + + ++ D + + ++P Y ++
Sbjct: 267 HLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQ 326
Query: 174 QQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVES 233
Q++IF RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++
Sbjct: 327 QRRIF-------LPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 234 LLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 293
L V PISK+ A QRSGRAGRT GKCFR+Y++ +N + PEI R++L + VLTLK
Sbjct: 380 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 294 KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKML 353
L I D++ F ++DPP ++ AL+ L A+D G++T +G M EFPL P ++ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 354 VESPKYNCSNEILSISAMLSVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLN 407
+++ +C + +L I+AMLSV N F+RP E QK A+ E A+ G + D TL
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAV 558
Query: 408 VYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYV 465
++ K + SWC ++++ R L SA V QL ++ + + F + V
Sbjct: 559 IFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEV 618
Query: 466 NIRKAMLAGYFMQVAHLERTGQYLTVKDNQ--VVHLHPSNCLDH----KPEWVIYNEYVL 519
+R+ + AGYF VA G+ D + VH+H NC H K EW+I++E ++
Sbjct: 619 -LRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIH-QNCKLHEQETKLEWIIFHEVLV 675
Query: 520 TSRNFIRTVTDVRGEWLIDIAPHYYDLS 547
T++ + R V +R EW+ D+ P ++ +
Sbjct: 676 TTKVYARIVCPIRYEWVRDLLPKLHEFN 703
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 790 (283.2 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
Identities = 193/506 (38%), Positives = 289/506 (57%)
Query: 64 LKLVVMSATLEAEKFQGYF---YGA-PLMK-------------VPGRLHPVEIFYTQEPE 106
LK VVMSAT + E Q +F Y A L K + GR PV+ Y+ EP
Sbjct: 322 LKAVVMSATADMESLQEFFVEGYKARELQKEEKSEKDGIAVCHIKGRQFPVKTIYSPEPV 381
Query: 107 RDYLEAAIRTVVQIHMCEP-SGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPL 165
D+++AA++ + QIH EP GDILVFLTG+E +E + + T M + ++V+PL
Sbjct: 382 HDFVDAALKVIFQIHYKEPIPGDILVFLTGQETVEALENLVNEYATGMDPSLPKIQVLPL 441
Query: 166 YSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 225
++ LP A QQ++F RKI+++TNIAETS+T+ G+ YV+D G AK K +
Sbjct: 442 FAALPQAAQQRVF-------VPAPPRTRKIILATNIAETSVTVSGVRYVVDCGKAKIKQF 494
Query: 226 NPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 285
R+ ++SLLV PISK++A QR GRAGR PG+C+RLYTEK + L PEILR +L
Sbjct: 495 RTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQCYRLYTEKDYLA-LDEVNTPEILRCDL 553
Query: 286 ANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPL 345
+ +L +K G+D+++ F F+ P E L +AL L + ALD+ G ++E G +++ PL
Sbjct: 554 SQAILNMKARGVDNVIEFPFLTRPPREALEKALLQLLSIEALDETGKISETGSHIAKLPL 613
Query: 346 DPQMSKMLVESPKY--NCSNEILSISAMLSVPNCFVRP--REAQKAADEAKARFGHIDGD 401
P + ++L+ + + +C +++ I + LSV N F+ E ++AA+ A+ +GD
Sbjct: 614 TPTLGRVLLAASDFGPDCLTDVIDIISCLSVENIFLNTTSEEKKEAAEAARRDLYRREGD 673
Query: 402 HLTLLNVYHAYKQNNED-PSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNS 460
HLT+L AY N D +W + V+HRA++S +VR+QL R KL + S
Sbjct: 674 HLTMLATVRAYASENTDRKAWAERHLVSHRAMQSVMDVRKQLTA-QCR-QAKLLPSPTES 731
Query: 461 RDYY---------VNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL-DHKPE 510
RD V I K+ L G+ A L G Y TV NQ V +HPS+ L K E
Sbjct: 732 RDSDSSSIREPSPVFILKSFLRGFATNTARLVPDGSYRTVVGNQTVAIHPSSVLFGKKVE 791
Query: 511 WVIYNEYVLTSRNFIRTVTDVRGEWL 536
++YNE+V T+R++ R V+ V+ +W+
Sbjct: 792 AILYNEFVFTNRSYARGVSAVQMDWV 817
Score = 154 (59.3 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD------LK 65
++LT+GMLL+E + DP L +Y IV+DE HER + D++ G L+ ++ + + LK
Sbjct: 264 KFLTEGMLLQEMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGKREGRGGVPLK 323
Query: 66 LVVMSATLEAEKFQGYF 82
VVMSAT + E Q +F
Sbjct: 324 AVVMSATADMESLQEFF 340
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
Identities = 214/561 (38%), Positives = 323/561 (57%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKN--RPDLKLVVM 69
+YLTDGMLLRE M D L +Y I+LDEAHERT+ TD++ G LK+++ + R DLK+VVM
Sbjct: 273 KYLTDGMLLREIMLDSNLTKYSTIILDEAHERTILTDLIMGFLKQIITSGKRKDLKIVVM 332
Query: 70 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 129
SATL AE F +F AP++ + G+++PV FY D ++ IR+++QI++ EP GD+
Sbjct: 333 SATLNAELFSNFFGNAPILYIEGKMYPVSQFYLDAESEDIVDTMIRSIIQINLNEPEGDV 392
Query: 130 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKV-VPLYSTLPPAMQQKIFEXXXXXXXXX 188
L FL G+EEI D C K +++ + P+ V +PLY+ L P Q KIFE
Sbjct: 393 LCFLPGQEEI-DNCVKSLEQLAPQLPREAPLIVPLPLYAALSPGQQSKIFEKLPKGR--- 448
Query: 189 XXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 248
RK++++TNIAETS+T+ G+ YVID G K KV+ + + +LL +PIS+ASA QR+
Sbjct: 449 ----RKVILATNIAETSITVSGVKYVIDSGLRKIKVWKHNLGLSTLLTTPISQASARQRA 504
Query: 249 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 308
GRAGR GK FRLY E ++ L Q EI R+++ VLTLKKLG+DDL+++ +++
Sbjct: 505 GRAGRESEGKVFRLYPESTYMA-LPKQQESEIKRNDIILPVLTLKKLGVDDLLNWSWLEY 563
Query: 309 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 368
P + ++ AL L LGAL+D G +T +G KMS PL PQ+S +L+ + ++ + ++ I
Sbjct: 564 PGQDAILSALNTLYTLGALNDSGKVTTLGYKMSILPLPPQLSVVLITAAEFGVLSPVIDI 623
Query: 369 SAMLSVPNCFVRPREAQKAADEA--KAR----FGHIDGDHLTLLNVYHAYKQNNEDPSWC 422
++ LSV N +A DE K R G+I GD + L + AY+ ++ WC
Sbjct: 624 ASCLSVDNLITNV--TGEARDEINFKRRQHCPLGNIHGDLIALYEYFQAYQAQGKE--WC 679
Query: 423 YDNFVNHRALKSADNVRQQLVRIM------------ARFNLKLCS------NDFNSRDYY 464
+ + + K+ + ++ QL M A N +L N+ +
Sbjct: 680 KELAFSFKGFKNVEKIKYQLQEYMMTTIKQDDSLTNAEKNKQLAKLRAQLDNEETDKQLD 739
Query: 465 V-NIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDHKPEW--VIYNEYVLTS 521
V +I K+ L GY A + T Q++ +HPS+ L KP ++Y EYV T+
Sbjct: 740 VPSILKSFLKGYITNTAVGMPDRSFRTFNTGQLISVHPSSTLFGKPNMDAIMYIEYVFTT 799
Query: 522 RNFIRTVTDVRGEWLIDIAPH 542
+ + R V+ + WL +IAPH
Sbjct: 800 KGYARNVSAIELSWLQEIAPH 820
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 520 (188.1 bits), Expect = 2.1e-91, Sum P(2) = 2.1e-91
Identities = 100/213 (46%), Positives = 149/213 (69%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ + L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKLVV SA
Sbjct: 629 KYMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSA 688
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++A+KF +F P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDILV
Sbjct: 689 TMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILV 748
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
F+ G+E+IE +I + + + ++ + V+P+YS LP +Q KIF+
Sbjct: 749 FMPGQEDIEVTSEQIVEHLEEL-EKAPALAVLPIYSQLPSDLQAKIFQKAPDGV------ 801
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKV 224
RK +V+TNIAETSLT+DGI++VID G+ K KV
Sbjct: 802 -RKCIVATNIAETSLTVDGIMFVIDSGYCKLKV 833
Score = 432 (157.1 bits), Expect = 2.1e-91, Sum P(2) = 2.1e-91
Identities = 85/221 (38%), Positives = 134/221 (60%)
Query: 333 LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAK 392
LT G +M EFPLDP +SKML+ S CS+EIL I +MLSVP F RP+ ++ +D+ +
Sbjct: 876 LTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVR 935
Query: 393 ARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMA--RFN 450
+F + DHLT LNVY +K NN WC +F++ +A++ VR QL IM R +
Sbjct: 936 EKFAVPESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMS 995
Query: 451 LKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL---DH 507
L C D++ +RK + A YF Q A L+ G+Y+ ++ HLHP++ L +
Sbjct: 996 LASCGTDWDV------VRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGY 1049
Query: 508 KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
P++++Y+E V+T++ +++ VT V GEWL ++ P +Y + +
Sbjct: 1050 TPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKH 1090
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 878 (314.1 bits), Expect = 2.1e-87, P = 2.1e-87
Identities = 211/548 (38%), Positives = 320/548 (58%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+ +TDG+LL E TD L++Y +++DEAHER+L D L G LK +L R DLKLV+ SA
Sbjct: 168 KLMTDGILLAETQTDRFLDQYDTLIVDEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSA 227
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFY----TQEPERDYLEA----AIRTVVQIHMC 123
T++ E+F +F AP+++VPGR +PVEI Y + E E D E AI V
Sbjct: 228 TIDPERFSRHFDNAPIVRVPGRTYPVEIRYRPPDSAEEESDETERGEQQAILDAVDELHR 287
Query: 124 EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXX 183
E +GDIL+FL+GE EI D + K + D +V+PLYS L + Q+KIF+
Sbjct: 288 ENTGDILIFLSGEREIRDTAESLRKH--HPAD----CEVLPLYSRLTVSEQEKIFKPHGR 341
Query: 184 XXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 243
R+IV++TN+AETSLT+ GI VID G+A+ Y+ R +++ L + IS+AS
Sbjct: 342 ---------RRIVLATNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISRAS 392
Query: 244 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVH 302
A+QR+GR GR PG C RLY+E+ F N +P+ T PEILR+NLA +L +K L + D+
Sbjct: 393 ANQRAGRCGRVGPGVCIRLYSEQDFLN--RPEFTDPEILRTNLAAVILQMKALNLGDIRV 450
Query: 303 FDFMDPPAPETLMR-ALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNC 361
F F++PP E L+R L L + ALD G LTE+G +++ P+DP++ ++L+ + NC
Sbjct: 451 FPFVEPP-DERLVRDGLRTLQEINALDAQGRLTELGRRLARLPVDPRLGRILLAGAEENC 509
Query: 362 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS- 420
+E+ I A LSVP+ RP + +AAD+ ARF H D D + +L +++ Y++ + S
Sbjct: 510 LSEVCIIVAALSVPDPRERPADKAQAADQKHARFRHPDSDFMAILALWNDYEEQRQHLSG 569
Query: 421 -----WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGY 475
+C DNF++ ++ ++ QQ++ ++ + L L N + DY I +A+L G
Sbjct: 570 SKLRQYCRDNFLSALRMREWRDIHQQILEVV-KGELGLRPNQVPA-DYG-EIHRALLTGL 626
Query: 476 FMQVAHLERTGQYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGE 534
V + +Y+ V+ Q + P + L +P W+I E V TSR + RTV + E
Sbjct: 627 LCHVGFRQDQNEYVGVR-GQKFQIFPGSFLFKTRPVWIISAEQVETSRVYARTVARIEPE 685
Query: 535 WLIDIAPH 542
W+ H
Sbjct: 686 WIEKCGAH 693
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 166/359 (46%), Positives = 242/359 (67%)
Query: 193 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 252
RK +V+TNIAETSLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRAG
Sbjct: 111 RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAG 170
Query: 253 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 312
RT PG+CFRLYT+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP +
Sbjct: 171 RTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPED 230
Query: 313 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 372
++ ++ L LGALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +ML
Sbjct: 231 NMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSML 290
Query: 373 SVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRAL 432
SVP F RP+ ++ +D+ + +F + DHLT LNVY +K NN WC D+F++ +A+
Sbjct: 291 SVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAM 350
Query: 433 KSADNVRQQLVRIMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+ VR QL IM R +L C D++ +RK + A YF Q A L+ G+Y+
Sbjct: 351 RKVREVRAQLKDIMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYVN 404
Query: 491 VKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 546
++ HLHP++ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 405 IRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 463
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 204/552 (36%), Positives = 308/552 (55%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKN-RPDLKLVVMS 70
+YLTDGMLLRE M + L Y VIV+DEAHERT+ TD++ G LK +++ RPDL+++VMS
Sbjct: 177 KYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMS 236
Query: 71 ATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDIL 130
ATL+AEKF +F AP++ V GR V+ +Y + P D ++A IR +QI+ E GDIL
Sbjct: 237 ATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDIL 296
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVV---PLYSTLPPAMQQKIFEXXXXXXXX 187
FL G+EEI+ A + K + D+ PV ++ PLY+ LP Q +F
Sbjct: 297 CFLPGQEEIDKAVTIMEKIAKYVSDEA-PVPLIVPYPLYAALPAVQQSLVF-------AP 348
Query: 188 XXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQR 247
RK+V STNIAETS+TI G+ +V+D G K KV+ ++ + +LL PIS+ASA QR
Sbjct: 349 IKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQR 408
Query: 248 SGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMD 307
SGRAGR GK FRLY E + L Q+ PEI RS++ + VL LK+ G+DDL+++ + +
Sbjct: 409 SGRAGRESEGKSFRLYCESDYVK-LPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFE 467
Query: 308 PPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILS 367
P E ++ L+ L LGALD G +T+ G++M+ PL P +S +L+++ + C ++++
Sbjct: 468 NPGKEAIVMGLQELYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVID 527
Query: 368 ISAMLSVPNCFVRPR-EAQKAADEAKARF---GHIDGDHLTLLNVYHAYKQN---NEDPS 420
I + LSV N + P E + +E + G GD + L ++ Y ++D S
Sbjct: 528 IVSCLSVENLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDAS 587
Query: 421 -----WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSR------DYYVNIRK 469
WC ++ R K+ VR QL R + D S+ + I K
Sbjct: 588 SERNDWCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGEDGELISKILK 647
Query: 470 AMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYNEYVLTSRNFIRT 527
L G+ A Y TV + + +HPS+ L + ++Y EYV T++ + R
Sbjct: 648 CFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPGIMYTEYVFTTKGYARN 707
Query: 528 VTDVRGEWLIDI 539
V+ + WL ++
Sbjct: 708 VSRIELSWLQEV 719
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 859 (307.4 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 199/553 (35%), Positives = 321/553 (58%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+ +TDG+LL E D L +Y I++DEAHER+L D + G LK++L RPDLK+++ SA
Sbjct: 181 KLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSA 240
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYT-------QEPERDYLEAAIRTVVQIHMCE 124
T++ E+F +F AP+++V GR +PVE+ Y E +RD LE + V ++ C+
Sbjct: 241 TIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDEL--CD 298
Query: 125 PS-GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXX 183
GDIL+F+ GE EI D ++K N+ D ++VPLY+ L Q KIF+
Sbjct: 299 EGLGDILIFMNGEREIRDTADALSKR--NLRD----TEIVPLYARLSAGEQNKIFQPHAG 352
Query: 184 XXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 243
R+IV++TN+AETSLT+ GI YVIDPG A+ Y+ R +V+ L + PIS+AS
Sbjct: 353 ---------RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS 403
Query: 244 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVH 302
A+QR GR GRT+ G C RLY+E+ F + +P+ T PEILR+NLA+ +L + LG+ D+
Sbjct: 404 ANQRKGRCGRTEEGICIRLYSEEDFLS--RPEFTDPEILRTNLASVILQMTALGLGDIEA 461
Query: 303 FDFMDPPAPETLMRALEVLNYLGALDDD-----GNLTEMGEKMSEFPLDPQMSKMLVESP 357
F F++ P + + +L LGA++D LTE G++++ P+DP++++M++E+
Sbjct: 462 FPFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEAS 521
Query: 358 KYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ--- 414
K C E++ I++ LS+ + RP + Q++AD+ RF H D D LTL+N++H Q
Sbjct: 522 KLGCLKEVMIIASALSIQDPRERPSDKQQSADDKHRRFNHEDSDFLTLVNLWHYIGQQQK 581
Query: 415 ---NNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAM 471
+N+ C +++N+ ++ +V QL + KL ND Y+ + A+
Sbjct: 582 ALTSNQFRRQCKLDYLNYLRVREWQDVYTQLHQSTREMGFKL--ND-EPGSYHA-VHSAI 637
Query: 472 LAGYFMQVAHLERT-GQYLTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVT 529
L G + ++ +Y + N ++ P++ L K P+WV+ E V TS+ + R V
Sbjct: 638 LVGLLSHIGMKDQEKNEYHGAR-NARFNIFPASGLFKKQPKWVMSAELVETSKLWARVVA 696
Query: 530 DVRGEWLIDIAPH 542
+ +W+ +A H
Sbjct: 697 KIEPDWIEPLAKH 709
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 859 (307.4 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 199/553 (35%), Positives = 321/553 (58%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+ +TDG+LL E D L +Y I++DEAHER+L D + G LK++L RPDLK+++ SA
Sbjct: 181 KLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSA 240
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYT-------QEPERDYLEAAIRTVVQIHMCE 124
T++ E+F +F AP+++V GR +PVE+ Y E +RD LE + V ++ C+
Sbjct: 241 TIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDEL--CD 298
Query: 125 PS-GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXX 183
GDIL+F+ GE EI D ++K N+ D ++VPLY+ L Q KIF+
Sbjct: 299 EGLGDILIFMNGEREIRDTADALSKR--NLRD----TEIVPLYARLSAGEQNKIFQPHAG 352
Query: 184 XXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 243
R+IV++TN+AETSLT+ GI YVIDPG A+ Y+ R +V+ L + PIS+AS
Sbjct: 353 ---------RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS 403
Query: 244 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVH 302
A+QR GR GRT+ G C RLY+E+ F + +P+ T PEILR+NLA+ +L + LG+ D+
Sbjct: 404 ANQRKGRCGRTEEGICIRLYSEEDFLS--RPEFTDPEILRTNLASVILQMTALGLGDIEA 461
Query: 303 FDFMDPPAPETLMRALEVLNYLGALDDD-----GNLTEMGEKMSEFPLDPQMSKMLVESP 357
F F++ P + + +L LGA++D LTE G++++ P+DP++++M++E+
Sbjct: 462 FPFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEAS 521
Query: 358 KYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ--- 414
K C E++ I++ LS+ + RP + Q++AD+ RF H D D LTL+N++H Q
Sbjct: 522 KLGCLKEVMIIASALSIQDPRERPSDKQQSADDKHRRFNHEDSDFLTLVNLWHYIGQQQK 581
Query: 415 ---NNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAM 471
+N+ C +++N+ ++ +V QL + KL ND Y+ + A+
Sbjct: 582 ALTSNQFRRQCKLDYLNYLRVREWQDVYTQLHQSTREMGFKL--ND-EPGSYHA-VHSAI 637
Query: 472 LAGYFMQVAHLERT-GQYLTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVT 529
L G + ++ +Y + N ++ P++ L K P+WV+ E V TS+ + R V
Sbjct: 638 LVGLLSHIGMKDQEKNEYHGAR-NARFNIFPASGLFKKQPKWVMSAELVETSKLWARVVA 696
Query: 530 DVRGEWLIDIAPH 542
+ +W+ +A H
Sbjct: 697 KIEPDWIEPLAKH 709
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 857 (306.7 bits), Expect = 4.4e-85, P = 4.4e-85
Identities = 200/560 (35%), Positives = 322/560 (57%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+ +TDG+LL E +D L++Y I++DEAHER+L D + G LK++LK RPDLK+++ SA
Sbjct: 170 KLMTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSA 229
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFY---TQEPERDY--LEAAIRTVVQIHMCEPS 126
T++ E+F +F AP+++V GR +PVE Y Q+ E D +E V ++ + E
Sbjct: 230 TIDVERFSKHFNNAPIIEVSGRTYPVETRYRPLVQDTEADLDQIEGIFAAVDEL-VAEGL 288
Query: 127 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXX 186
GDIL+F+ GE EI D ++ + N D +++PLY+ L Q K+F
Sbjct: 289 GDILIFMNGEREIRDTAEQLNRR--NYRD----TEILPLYARLSYGEQSKVFSSHTG--- 339
Query: 187 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 246
R+IV++TN+AETSLT+ GI YVIDPG A+ Y+ R +V+ L + PIS+ASA+Q
Sbjct: 340 ------RRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQ 393
Query: 247 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDF 305
R GR GR PG C RLY E FNN +P T PEILR+NLA+ +L + +G+ D+ F F
Sbjct: 394 RQGRCGRVGPGICIRLYDEADFNN--RPAFTDPEILRTNLASVILQMLAIGLGDIAAFPF 451
Query: 306 MDPPAPETLMRALEVLNYLGALDDD-GN--LTEMGEKMSEFPLDPQMSKMLVESPKYNCS 362
++PP P + +L L A+ GN LT +G ++S+ P+DP++++M++ES + C
Sbjct: 452 IEPPDPRHIRDGFLLLEELQAVKQQKGNIVLTPLGRQLSQIPVDPRLARMVIESHQLGCL 511
Query: 363 NEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSW- 421
NE+L I++ LS+ + RP + ++A+DEA RF D ++ +N++ K+ ++ S
Sbjct: 512 NEVLVIASGLSIQDPRERPMDKKQASDEAHRRFADPQSDFVSWVNLWQHLKEQQKELSAS 571
Query: 422 -----CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYF 476
C D ++ + ++ ++ QL + A +LK ND + Y + +A+L+G
Sbjct: 572 QFRKKCRDEYLAYLRVREWQDLYTQLKQ--AVHDLKWRLNDTPAN--YDALHRALLSGLL 627
Query: 477 MQVAHLERTGQYLTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEW 535
+ + +YL + N+ + P + L K P+W++ E + TS+ F R + EW
Sbjct: 628 SHIGFKDNNNEYLGAR-NRKFFVFPGSPLAKKGPKWIMAAELMETSKLFARCCAKIEPEW 686
Query: 536 LIDIAPHYYDLSNF-PQCEA 554
L +A H ++ P EA
Sbjct: 687 LEPLAAHLIKKNHLEPHFEA 706
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 857 (306.7 bits), Expect = 4.4e-85, P = 4.4e-85
Identities = 200/560 (35%), Positives = 322/560 (57%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+ +TDG+LL E +D L++Y I++DEAHER+L D + G LK++LK RPDLK+++ SA
Sbjct: 170 KLMTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSA 229
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFY---TQEPERDY--LEAAIRTVVQIHMCEPS 126
T++ E+F +F AP+++V GR +PVE Y Q+ E D +E V ++ + E
Sbjct: 230 TIDVERFSKHFNNAPIIEVSGRTYPVETRYRPLVQDTEADLDQIEGIFAAVDEL-VAEGL 288
Query: 127 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXX 186
GDIL+F+ GE EI D ++ + N D +++PLY+ L Q K+F
Sbjct: 289 GDILIFMNGEREIRDTAEQLNRR--NYRD----TEILPLYARLSYGEQSKVFSSHTG--- 339
Query: 187 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 246
R+IV++TN+AETSLT+ GI YVIDPG A+ Y+ R +V+ L + PIS+ASA+Q
Sbjct: 340 ------RRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQ 393
Query: 247 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDF 305
R GR GR PG C RLY E FNN +P T PEILR+NLA+ +L + +G+ D+ F F
Sbjct: 394 RQGRCGRVGPGICIRLYDEADFNN--RPAFTDPEILRTNLASVILQMLAIGLGDIAAFPF 451
Query: 306 MDPPAPETLMRALEVLNYLGALDDD-GN--LTEMGEKMSEFPLDPQMSKMLVESPKYNCS 362
++PP P + +L L A+ GN LT +G ++S+ P+DP++++M++ES + C
Sbjct: 452 IEPPDPRHIRDGFLLLEELQAVKQQKGNIVLTPLGRQLSQIPVDPRLARMVIESHQLGCL 511
Query: 363 NEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSW- 421
NE+L I++ LS+ + RP + ++A+DEA RF D ++ +N++ K+ ++ S
Sbjct: 512 NEVLVIASGLSIQDPRERPMDKKQASDEAHRRFADPQSDFVSWVNLWQHLKEQQKELSAS 571
Query: 422 -----CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYF 476
C D ++ + ++ ++ QL + A +LK ND + Y + +A+L+G
Sbjct: 572 QFRKKCRDEYLAYLRVREWQDLYTQLKQ--AVHDLKWRLNDTPAN--YDALHRALLSGLL 627
Query: 477 MQVAHLERTGQYLTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEW 535
+ + +YL + N+ + P + L K P+W++ E + TS+ F R + EW
Sbjct: 628 SHIGFKDNNNEYLGAR-NRKFFVFPGSPLAKKGPKWIMAAELMETSKLFARCCAKIEPEW 686
Query: 536 LIDIAPHYYDLSNF-PQCEA 554
L +A H ++ P EA
Sbjct: 687 LEPLAAHLIKKNHLEPHFEA 706
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 198/557 (35%), Positives = 318/557 (57%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV-LKNRP-DLKLVVM 69
R+ D + L+E + + V++LDEA ER++A+D+L GLL++ L+N P D ++VV+
Sbjct: 141 RFCWDRLFLQEVASTRGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVV 200
Query: 70 SATLEAEKFQGYFYGAPLMKVPGRL--HPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS- 126
+ KFQ ++ +P+++VP P + Y D +EAA + V+++ E +
Sbjct: 201 TDPALEPKFQAFWGNSPIVRVPREPGGDPT-LAYKDTVPTDLVEAACQAVLELCQQEEAP 259
Query: 127 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXX 186
GD+LV+L EEEI C ++ E+ + P +V+PL+ A+Q ++E
Sbjct: 260 GDVLVYLPSEEEISLCCESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQT-VYEDTDVSV- 317
Query: 187 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 246
RKIVV+ +A+ S ++ I +VID G + VYNPR+R ES ++ PISK A
Sbjct: 318 ------RKIVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEA 371
Query: 247 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFM 306
R RA PG C RLY++ + + P +P++ NL++ VL L + I + F+
Sbjct: 372 RLLRAKGFPPGSCLRLYSKSTLELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFL 431
Query: 307 DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEIL 366
D PAPE LMRALE L+YL AL+DDG L+++G +SEFPL P+++K L+ S ++NC +E+L
Sbjct: 432 DRPAPEALMRALEDLDYLAALNDDGELSDLGVILSEFPLPPELAKALLASCEFNCVDEML 491
Query: 367 SISAMLSVPNCFVRPREAQKAADEAKAR--FGHIDGDHLTLLNVYHAYKQNNEDPSWCYD 424
+++AML+ F RP +A EA R H DGDH +L+ VY A+ Q+ D +WC
Sbjct: 492 TLAAMLTAAPGFTRP---PLSAGEAALRRALEHADGDHSSLIQVYEAFVQSGADEAWCQA 548
Query: 425 NFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-LE 483
+N +L A +R +LV +M R L L F S +++KA+L+GYF++VA +
Sbjct: 549 RGLNWESLCQARKLRAELVELMQRIELPLSQPAFGSEQNRRDLQKALLSGYFLKVARDTD 608
Query: 484 RTGQYLTVKDNQVVHLHPSNCLDHK------PEWVIYNEYVLTSRNFIRTVTDVRGEWLI 537
TG YL + V L P ++ P WV+Y+ + ++ N + V++++ E L+
Sbjct: 609 GTGNYLLLTHKHVAQLSPYCSYRNRRTPAQPPTWVLYHSFSISKDNCLCIVSEIQPEMLV 668
Query: 538 DIAPHYYDLSNFPQCEA 554
++AP Y+ LSN P E+
Sbjct: 669 ELAPPYF-LSNLPPSES 684
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 201/558 (36%), Positives = 324/558 (58%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV-LKNRP-DLKLVVM 69
R+ D + L+E + + V+VLDEA ER++A+D+L GLL++ L+N P D ++V++
Sbjct: 141 RFCWDRLFLQEVASTRGPGAWSVLVLDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVIV 200
Query: 70 SATLEAEKFQGYFYGAPLMKVPGRL--HPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS- 126
+ + KFQ ++ +P + VP +P + Y D +EAA + V+++ E +
Sbjct: 201 TDSALEPKFQAFWGNSPTVHVPREPGENPT-LTYKDTVPADLVEAACQAVLELCQREEAP 259
Query: 127 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPV-KVVPLYSTLPPAMQQKIFEXXXXXX 185
GD+LV+L EEEI C +++E+ M GP+ +V+PL+ A+Q ++E
Sbjct: 260 GDVLVYLPSEEEISLCCESLSREM-GMLAVPGPLPRVLPLHPGCGQAIQT-VYEDTDVSV 317
Query: 186 XXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAH 245
RKIVV+ +A+ S ++ I +VID G + VYNPR+R ES ++ ISK A
Sbjct: 318 -------RKIVVTHWLADFSFSLPFIQHVIDSGLELRSVYNPRIRAESQVLRRISKCQAE 370
Query: 246 QRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDF 305
R RA PG C RLY++ + + + P +P++ NL++ VL LK+ I + F
Sbjct: 371 ARLLRARGFPPGTCLRLYSKSTLDLEAPPLPHPKVCEENLSSLVLLLKRKQIAEPGECHF 430
Query: 306 MDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEI 365
+D PAPE LM+ALE L+YL ALDDDG+L+++G +SEFPL P+++K L+ S ++NC +E+
Sbjct: 431 LDRPAPEALMQALEDLDYLAALDDDGDLSDLGIILSEFPLPPELAKALLASCEFNCVDEM 490
Query: 366 LSISAMLSVPNCFVRPREAQKAADEAKARFG--HIDGDHLTLLNVYHAYKQNNEDPSWCY 423
L+++AML+ F RP A EA R G H DGDH +L+ VY A+ Q+ D +WC
Sbjct: 491 LTLAAMLTAAPGFTRP---PLCAGEAALRRGLEHADGDHSSLIQVYEAFVQSGADETWCQ 547
Query: 424 DNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-L 482
++ AL A +R +L+ +M R L L F S +++KA+L+GYF++VA
Sbjct: 548 ARGLSWEALCQARKLRAELLELMQRIELPLSLPAFGSEQNRRDLQKALLSGYFLKVARDT 607
Query: 483 ERTGQYLTVKDNQVVHLHPSNCLDHK------PEWVIYNEYVLTSRNFIRTVTDVRGEWL 536
+ TG YL + V L P ++ P WV+Y+ + ++ N + TV++++ E L
Sbjct: 608 DGTGNYLLLTHKHVAQLSPYCVYRNRRTPAQPPTWVLYHRFSISKDNCLCTVSEIQPEML 667
Query: 537 IDIAPHYYDLSNFPQCEA 554
+++AP Y+ LSN P E+
Sbjct: 668 VELAPPYF-LSNLPPSES 684
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 186/557 (33%), Positives = 302/557 (54%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY TD ML RE M+ PLL Y VI+LD+ HERT+ TDVL G+LK VL+ RP L+LV+++A
Sbjct: 169 RYCTDDMLQREMMSAPLLNSYGVIILDDVHERTVPTDVLLGVLKHVLRARPALRLVILTA 228
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
+ K Q + PL++V H E+ YT +D+ +A+R + ++H + GDI++
Sbjct: 229 PHMSSKLQDFCGSVPLIRVENE-HQAEVVYTCSMPKDHFLSALRLLFELHHTKEKGDIVI 287
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
FL E++I+ A + I +E +N +G + VPLY P I +
Sbjct: 288 FLACEQDIDKAYQMIRQEQSNSNPDLGELIPVPLY----PTRNDLIPKPNQDKQKCYQKY 343
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK++++T+ + + I I +VID G ++KVYNPR+R +S+ PISKA A
Sbjct: 344 RRKVLLTTSSGGSLIRIKNITFVIDVGVERRKVYNPRIRADSVTTQPISKAQAEMHKQIL 403
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA- 310
+ GK F LY E+ +++P +I SNL + VL LK++ I H +F+ P
Sbjct: 404 STSPSGKLFCLYPEEFTYKEMKPDFPAKIQESNLTSMVLFLKRMDIAGFRHCEFLSRPVC 463
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
P + + G+++ F + + + L + C E+L I
Sbjct: 464 PPSAKHGIRSTGKTHQTRRQGSISAHSYLSQNFGILNKKGESLSVPCSFTCHTEVLPIHV 523
Query: 371 MLSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ---NN-----EDPSW 421
+L PNCF+ P ++ A +F H GDH TL+NV++A+++ N+ + W
Sbjct: 524 LLHAPNCFLHTPSGTEEIALTCWRKFSHPAGDHFTLINVFNAFREASTNSAGQCCSNEKW 583
Query: 422 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 481
C + F++ AL+ A+ +R +LV IM R L + + DF S + ++I+KA+L+GYFMQ+A
Sbjct: 584 CRNYFLSCSALRMAEMIRAELVEIMKRIELPISAPDFGSPENTLSIKKALLSGYFMQIAR 643
Query: 482 -LERTGQYLTVKDNQVVHLHPSNCLDH---KPEWVIYNEYVLTSRNFIRTVTDVRGEWLI 537
++ +G YL + QV LHP + + PEWV+++E+ ++ N IR V+++ +
Sbjct: 644 DVDGSGNYLMLTHRQVAKLHPFSSYYYTRRSPEWVLFHEFSISEDNSIRVVSEISPHLFV 703
Query: 538 DIAPHYYDLSNFPQCEA 554
++AP YY SN P E+
Sbjct: 704 ELAPQYY-FSNLPPSES 719
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 697 (250.4 bits), Expect = 2.2e-82, Sum P(2) = 2.2e-82
Identities = 169/459 (36%), Positives = 256/459 (55%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD----LKLVV 68
Y+TDG++LR+A+ PLL++Y +++DEAHER+L +DVL +L++ R + L+L++
Sbjct: 256 YMTDGIVLRKALVSPLLDKYSCVIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLII 315
Query: 69 MSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEP------ERDYLEAAIRTVVQIHM 122
MSATL+AEKFQ YF A ++ V GR P+E+F+ DY+ A+ V +H+
Sbjct: 316 MSATLQAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINKSFSSTDYVYNAVICVKYVHL 375
Query: 123 CEPSG-DILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXX 181
EP G DILVFLTG EEIE ++ + ++ + VPLY+ L P Q++ F
Sbjct: 376 TEPKGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKT 435
Query: 182 XXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISK 241
RK+++STNIAETS+TI GI VID G K K + R++ L V +SK
Sbjct: 436 PQGA-------RKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSK 488
Query: 242 ASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLV 301
A A QR+GRAGR PGKC+RLY+ + F+ + + PEILR NL+ T L L KLG+ +
Sbjct: 489 AQAKQRAGRAGRDAPGKCYRLYSREDFHK-FEAENMPEILRCNLSATFLELMKLGMKNPH 547
Query: 302 HFDFMDPPAPETLMRALEVLNYLGAL---DDDGN---LTEMGEKMSEFPLDPQMSKMLVE 355
+DPP + + AL L LGA+ + D + LTEMG+ +PL P +++L +
Sbjct: 548 RLKLIDPPETDNINAALLELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARILFQ 607
Query: 356 SPKYNCSNEILSISAMLSVPNCFVRPREAQKAAD--EAKARFGHIDGDHLTLLNVYHAYK 413
+ K C E + I A + F +++ AD + RF +GDH+TLL +
Sbjct: 608 AQKEGCIMEAIKIVAAMQTDALFSGAGDSKSDADVDRIRRRFETREGDHITLLKLVLVTN 667
Query: 414 QNNEDPSWCYDNFVNH-RALKSADNVRQQLVRIMARFNL 451
Q + + ++ + +A KS + Q +R N+
Sbjct: 668 QFFDQLNKKTESDARYGKANKSLEREYNQTIRKFCNDNM 706
Score = 148 (57.2 bits), Expect = 2.2e-82, Sum P(2) = 2.2e-82
Identities = 35/121 (28%), Positives = 63/121 (52%)
Query: 421 WCYDNFVNHRALKSADNVRQQL--VRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQ 478
+C DN +N + LK+A + +QL + I + C DF + +RKA+ G F+
Sbjct: 701 FCNDNMINEQHLKTASMIEEQLKQIAIEQKVTFSTCGADF------MKMRKALALGMFLN 754
Query: 479 VAHLERT-GQY-LTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDVRGEW 535
+R +Y L + + +HPS+CL KP +++++E + T+ F VT + G+W
Sbjct: 755 SCEYDRQEDRYRLMINPAITLKIHPSSCLSRSKPAYIVFSELMKTNDLFALQVTLIDGDW 814
Query: 536 L 536
+
Sbjct: 815 V 815
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 402 (146.6 bits), Expect = 1.6e-81, Sum P(4) = 1.6e-81
Identities = 96/249 (38%), Positives = 150/249 (60%)
Query: 132 FLTGEEEIEDACRKITK-EITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
F T + + + C K EI M D++ +K++ LYS+LP Q+ IFE
Sbjct: 373 FNTDDHILNEICFHFGKTEI--MPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNT----- 425
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+++STNIAETS+TI I YVID G K K ++ L V+ ISK SA QRSGR
Sbjct: 426 --RKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRSGR 483
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGR PG+ +R+YT++ + N + P PEI RS+L L LK + I++ + F+F + P
Sbjct: 484 AGREAPGQVYRIYTKEEYEN-MNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPENPR 542
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
E + + ++L + A+D + NLT++G+K+ FPL+P + +L+ S ++NC +EI +I A
Sbjct: 543 KELFVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVA 602
Query: 371 MLSVPNCFV 379
+L+ + F+
Sbjct: 603 LLNCDSIFL 611
Score = 273 (101.2 bits), Expect = 1.6e-81, Sum P(4) = 1.6e-81
Identities = 46/110 (41%), Positives = 77/110 (70%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+++TDG+L+RE M DPLL++YK ++LDE HER++ TDVL G K +L+ R +K+++MSA
Sbjct: 119 KFVTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSA 178
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
T + F +F P++ +P +LH + I+Y + DY+ + + T++QIH
Sbjct: 179 TFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 161 (61.7 bits), Expect = 1.6e-81, Sum P(4) = 1.6e-81
Identities = 40/161 (24%), Positives = 80/161 (49%)
Query: 383 EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNN--EDPSWCYDNFVNHRALKSADNVRQ 440
+ K + A+ + H DGDHLTLL++++ +++ + E +C +N+ L+ + ++
Sbjct: 696 DKNKLINVARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKI 755
Query: 441 QLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-LERTGQYLTVKDNQVVHL 499
QL+ IM +K+ + I + F +A T Y+ + + + +
Sbjct: 756 QLLEIMKN-KMKIEIPKKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKIRI 814
Query: 500 HPSNCLDH---KPEWVIYNEYVLTSRNFIRTVTDVRGEWLI 537
HPS+ L + KP ++ Y++ V T R + R VT + +WL+
Sbjct: 815 HPSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLL 855
Score = 60 (26.2 bits), Expect = 1.6e-81, Sum P(4) = 1.6e-81
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 127 GDILVFLTGEEEIE 140
GDILVFL G+EEIE
Sbjct: 317 GDILVFLPGQEEIE 330
Score = 37 (18.1 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 450 NLKLCSNDFNSRDYYVNI 467
N+ LCS +FN D I
Sbjct: 583 NILLCSIEFNCIDEIATI 600
Score = 37 (18.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 221 KQKVYNPRVRVESLLVSPIS 240
K +Y PR +E ++S +S
Sbjct: 203 KITIYYPRRNIEDYILSVVS 222
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 402 (146.6 bits), Expect = 1.6e-81, Sum P(4) = 1.6e-81
Identities = 96/249 (38%), Positives = 150/249 (60%)
Query: 132 FLTGEEEIEDACRKITK-EITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
F T + + + C K EI M D++ +K++ LYS+LP Q+ IFE
Sbjct: 373 FNTDDHILNEICFHFGKTEI--MPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNT----- 425
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+++STNIAETS+TI I YVID G K K ++ L V+ ISK SA QRSGR
Sbjct: 426 --RKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRSGR 483
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGR PG+ +R+YT++ + N + P PEI RS+L L LK + I++ + F+F + P
Sbjct: 484 AGREAPGQVYRIYTKEEYEN-MNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPENPR 542
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
E + + ++L + A+D + NLT++G+K+ FPL+P + +L+ S ++NC +EI +I A
Sbjct: 543 KELFVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVA 602
Query: 371 MLSVPNCFV 379
+L+ + F+
Sbjct: 603 LLNCDSIFL 611
Score = 273 (101.2 bits), Expect = 1.6e-81, Sum P(4) = 1.6e-81
Identities = 46/110 (41%), Positives = 77/110 (70%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+++TDG+L+RE M DPLL++YK ++LDE HER++ TDVL G K +L+ R +K+++MSA
Sbjct: 119 KFVTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSA 178
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
T + F +F P++ +P +LH + I+Y + DY+ + + T++QIH
Sbjct: 179 TFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 161 (61.7 bits), Expect = 1.6e-81, Sum P(4) = 1.6e-81
Identities = 40/161 (24%), Positives = 80/161 (49%)
Query: 383 EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNN--EDPSWCYDNFVNHRALKSADNVRQ 440
+ K + A+ + H DGDHLTLL++++ +++ + E +C +N+ L+ + ++
Sbjct: 696 DKNKLINVARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKI 755
Query: 441 QLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-LERTGQYLTVKDNQVVHL 499
QL+ IM +K+ + I + F +A T Y+ + + + +
Sbjct: 756 QLLEIMKN-KMKIEIPKKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKIRI 814
Query: 500 HPSNCLDH---KPEWVIYNEYVLTSRNFIRTVTDVRGEWLI 537
HPS+ L + KP ++ Y++ V T R + R VT + +WL+
Sbjct: 815 HPSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLL 855
Score = 60 (26.2 bits), Expect = 1.6e-81, Sum P(4) = 1.6e-81
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 127 GDILVFLTGEEEIE 140
GDILVFL G+EEIE
Sbjct: 317 GDILVFLPGQEEIE 330
Score = 37 (18.1 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 450 NLKLCSNDFNSRDYYVNI 467
N+ LCS +FN D I
Sbjct: 583 NILLCSIEFNCIDEIATI 600
Score = 37 (18.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 221 KQKVYNPRVRVESLLVSPIS 240
K +Y PR +E ++S +S
Sbjct: 203 KITIYYPRRNIEDYILSVVS 222
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
Identities = 194/555 (34%), Positives = 315/555 (56%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV-LKNRP-DLKLVVM 69
R+ D +LL+E + + V+VLDEA ER++A+D L GLL++ L+ P DL++VV+
Sbjct: 144 RFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVV 203
Query: 70 SATLEAEKFQGYFYGAPLMKVPGRL--HPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSG 127
+ K + ++ P++ +P P I++ P D +EAA + V+++ E G
Sbjct: 204 TDPALEPKLRAFWGNPPIVHIPREPGERPSPIYWDTIPP-DRVEAACQAVLELCRKELPG 262
Query: 128 DILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXX 187
D+LVFL EEEI C +++E+ ++ Q P +V+PL+ A+Q ++E
Sbjct: 263 DVLVFLPSEEEISLCCESLSREVESLLLQGLPPRVLPLHPDCGRAVQA-VYEDMDA---- 317
Query: 188 XXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQR 247
RK+VV+ +A+ S ++ I +VID G + VYNPR+R E ++ PISK A R
Sbjct: 318 -----RKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEAR 372
Query: 248 SGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMD 307
RA PG C LY + + P P + NL++ VL LK+ I + F+D
Sbjct: 373 RLRARGFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLD 432
Query: 308 PPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILS 367
PAPE LM+ALE L+YL ALDDDG+L+++G +SEFPL P+++K L+ S +++C +E+L+
Sbjct: 433 QPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLT 492
Query: 368 ISAMLSVPNCFVRPR-EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNF 426
++AML+ F RP A++AA + H DGDH +L+ VY A+ Q+ D +WC
Sbjct: 493 LAAMLTAAPGFTRPPLSAEEAA--LRRALEHTDGDHSSLIQVYEAFIQSGADEAWCQARG 550
Query: 427 VNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-LERT 485
+N AL A +R +L+ +M R L L F S +++KA+++GYF++VA + T
Sbjct: 551 LNWAALCQAHKLRGELLELMQRIELPLSLPAFGSEQNRRDLQKALVSGYFLKVARDTDGT 610
Query: 486 GQYLTVKDNQVVHLHPSNCLDHK------PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 539
G YL + V L C + P WV+Y+ + ++ N + V++++ + L+++
Sbjct: 611 GNYLLLTHKHVAQLSSYCCYRSRRAPARPPPWVLYHNFTISKDNCLSIVSEIQPQMLVEL 670
Query: 540 APHYYDLSNFPQCEA 554
AP Y+ LSN P E+
Sbjct: 671 APPYF-LSNLPPSES 684
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 818 (293.0 bits), Expect = 8.8e-81, P = 8.8e-81
Identities = 192/550 (34%), Positives = 310/550 (56%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+ +TDG+LL E D LL +Y I++DEAHER+L D L G LKE+L RPDLK+++ SA
Sbjct: 171 KLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSA 230
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFY------TQEPERDYLEAAIRTVVQIHMCEP 125
T++ E+F +F AP+++V GR +PVE+ Y + ERD L+A V ++ E
Sbjct: 231 TIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ES 289
Query: 126 SGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXX 185
GDIL+F++GE EI D + K N+ +++PLY+ L + Q ++F+
Sbjct: 290 HGDILIFMSGEREIRDTADALNK--LNLRH----TEILPLYARLSNSEQNRVFQSHSG-- 341
Query: 186 XXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAH 245
R+IV++TN+AETSLT+ GI YVIDPG A+ Y+ R +V+ L + PIS+ASA+
Sbjct: 342 -------RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 394
Query: 246 QRSGRAGRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFD 304
QR GR GR G C RLY+E F + +P+ T PEILR+NLA+ +L + LG+ D+ F
Sbjct: 395 QRKGRCGRVSEGICIRLYSEDDFLS--RPEFTDPEILRTNLASVILQMTALGLGDIAAFP 452
Query: 305 FMDPPAPETLMRALEVLNYLGALDDDGN-----LTEMGEKMSEFPLDPQMSKMLVESPKY 359
F++ P + + +L LGA+ D LT +G ++S+ P+DP++++M++E+ K+
Sbjct: 453 FVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKH 512
Query: 360 NCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNV--YHAYKQ--- 414
C E + I++ LS+ + RP + Q+A+DE RF + D L +N+ Y +Q
Sbjct: 513 GCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKAL 572
Query: 415 -NNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLA 473
+N C +++N+ ++ ++ QL +++ + + S R+ ++ A+L
Sbjct: 573 SSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHI----ALLT 628
Query: 474 GYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDHKP-EWVIYNEYVLTSRNFIRTVTDVR 532
G + + Q T N + P + L KP +WV+ E V TSR + R +
Sbjct: 629 GLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARID 688
Query: 533 GEWLIDIAPH 542
EW+ +A H
Sbjct: 689 PEWVEPVAQH 698
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 194/557 (34%), Positives = 319/557 (57%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV-LKNRP-DLKLVVM 69
R+ D +LL+E + V++LDEA ER++A+D+L GLL++ L + P DL++VV+
Sbjct: 144 RFCWDRLLLQEVASTRGTGARGVLILDEAQERSVASDLLQGLLRDARLGSLPGDLRVVVV 203
Query: 70 SATLEAEKFQGYFYGAPLMKVPGRLH--PVEIFYTQEPERDYLEAAIRTVVQIHMCEPSG 127
+ K Q ++ G P + VP + P ++ P D ++AA + V++ E G
Sbjct: 204 TDPSLEPKLQDFWGGPPTVCVPRKTGSCPTPVYRDSLPA-DRVDAACQAVLEWCQEEAPG 262
Query: 128 DILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXX 187
D+LV+L EEEI C +++++ ++ +Q P +V+PL+ A+Q ++E
Sbjct: 263 DVLVYLPSEEEISLCCESLSRKVRSLENQGPPPRVLPLHPGCGQAVQA-VYEDTESGA-- 319
Query: 188 XXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQR 247
RK+VV+ +A+ S ++ I +VID G + VY+P++R ES ++ P+SK A R
Sbjct: 320 -----RKVVVTHWLADFSFSLPSIRHVIDSGLELRSVYSPQIRAESQVLRPVSKCQAEAR 374
Query: 248 SGRAGRTQPGKCFRLYTEKSFNNDLQPQT-YPEILRSNLANTVLTLKKLGIDDLVHFDFM 306
RA PG C LY KSF P P + NL++ +L LK+ I + F+
Sbjct: 375 RLRAAGIPPGSCLCLYP-KSFLELEAPYLPQPRVWAENLSSLMLLLKRRQIAEPGKCHFL 433
Query: 307 DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEIL 366
D PAPE LM+ALE L+YL ALDDDG+L+++G +SEFPL P+++K L+ S +++C +E+L
Sbjct: 434 DRPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEML 493
Query: 367 SISAMLSVPNCFVRPREAQKAADEAKAR--FGHIDGDHLTLLNVYHAYKQNNEDPSWCYD 424
+++AML+ F RP A+EA R H+DGDH +L+ VY A+ Q+ D +WC
Sbjct: 494 TLAAMLTAAPGFTRP---PVCAEEAALRRALEHVDGDHSSLIQVYEAFIQSGADKAWCQA 550
Query: 425 NFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-LE 483
+N AL A +R +L+ +M R L L F S +++KA+++GYF++VA +
Sbjct: 551 RGLNWAALCQARKLRGELLELMQRIELPLSQPAFGSERNRRDLQKALVSGYFLKVARDTD 610
Query: 484 RTGQYLTVKDNQVVHLHPSNCLDHK------PEWVIYNEYVLTSRNFIRTVTDVRGEWLI 537
TG YL + V L P+ C + P WV+Y+ + ++ N + V++++ + L+
Sbjct: 611 GTGNYLLLTHKHVAQLSPNCCYRSRRAPARPPLWVLYHSFSISKDNCLSIVSEIQPQMLV 670
Query: 538 DIAPHYYDLSNFPQCEA 554
++AP Y+ LSN P E+
Sbjct: 671 ELAPPYF-LSNLPPSES 686
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 195/557 (35%), Positives = 312/557 (56%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV-LKNRP-DLKLVVM 69
R+ D +LL+E + + V+VLDEA ER++A+D+L GLL+ L N P D ++VV+
Sbjct: 144 RFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASDLLQGLLRNAKLGNLPGDSRVVVV 203
Query: 70 SATLEAEKFQGYFYGAPLM----KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP 125
+ K Q F+G P + + PG P ++ P D +EAA + V+++ E
Sbjct: 204 TDPALEPKLQA-FWGNPTIVHVPRGPGAC-PTPVYRDIVPT-DRVEAACQAVLELCAKEA 260
Query: 126 SGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXX 185
GD+LV+L EEEI C +++E+ + + P +V+PL+ PA+Q +E
Sbjct: 261 PGDVLVYLPSEEEILQCCESLSREVEPLALRGPPPRVLPLHPGHGPAVQAA-YEDIDLGA 319
Query: 186 XXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAH 245
RK+VV+ +A+ S ++ I +VID G + VYNP++R ES ++ PIS+ A
Sbjct: 320 -------RKVVVTHWLADFSFSLPSIRHVIDSGLELRSVYNPQIRAESQVLRPISRCQAE 372
Query: 246 QRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDF 305
R RA PG C LY E + P + NL+ VL LK+ I + F
Sbjct: 373 ARRLRARGIPPGSCICLYPESFLELEAPLLPPPRVCEENLSPMVLLLKRRQIAEPGECHF 432
Query: 306 MDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEI 365
+D PAPE LM+ALE L+YL ALDDDGNL+++G +SEFPL P+++K L+ S +++C +E+
Sbjct: 433 LDRPAPEALMQALEDLDYLAALDDDGNLSDLGVILSEFPLPPELAKALLASCEFDCVDEM 492
Query: 366 LSISAMLSVPNCFVRPR-EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYD 424
L+++AML+ F P A++AA + H DGDH +L+ VY A+ Q+ D +WC
Sbjct: 493 LTLAAMLTAAPGFTHPPLSAEEAA--LRRALEHADGDHSSLIQVYEAFIQSGADEAWCQA 550
Query: 425 NFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-LE 483
+N AL A +R +L+ +M + L L F S +++KA+++GYF++VA +
Sbjct: 551 RGLNWAALCQAQKLRGELLELMQQIELPLSQPAFGSEQNRRDLQKALVSGYFLKVARDTD 610
Query: 484 RTGQYLTVKDNQVVHLHPSNCLDHK------PEWVIYNEYVLTSRNFIRTVTDVRGEWLI 537
TG YL + V L P C + P WV+Y+ + ++ N + V++++ + L+
Sbjct: 611 GTGNYLLLTHKHVAQLSPYCCYRSRRSPARSPPWVLYHSFSISKDNCLSIVSEIQPQMLV 670
Query: 538 DIAPHYYDLSNFPQCEA 554
++AP Y+ LSN P E+
Sbjct: 671 ELAPPYF-LSNLPPSES 686
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 416 (151.5 bits), Expect = 6.4e-80, Sum P(5) = 6.4e-80
Identities = 98/246 (39%), Positives = 144/246 (58%)
Query: 158 GPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDP 217
G ++V+PLY+ L PA Q ++FE R +VV+TN+AETSLTI GI YV+D
Sbjct: 645 GKLRVLPLYAMLSPAAQLRVFEEVEKEE-------RLVVVATNVAETSLTIPGIKYVVDT 697
Query: 218 GFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTY 277
G K K Y+ + +ES V IS+ASA QR+GRAGRT PG C+RLY+ F+N + +
Sbjct: 698 GRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSL 757
Query: 278 PEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMG 337
PEI++ + +L +K + I + +F F PP P + A L L ALD +G LT +G
Sbjct: 758 PEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLG 817
Query: 338 EKMSEFPLDPQMSKMLV-------ESPKYNCSNEILSIS----AMLSVPNCFVRPREAQK 386
+ MS +P+ P+ S+ML+ E+ Y+ +N IL + A LS+PN + E +K
Sbjct: 818 KAMSHYPMSPRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALSLPNPLIMEFEGEK 877
Query: 387 AADEAK 392
+E+K
Sbjct: 878 K-NESK 882
Score = 161 (61.7 bits), Expect = 6.4e-80, Sum P(5) = 6.4e-80
Identities = 39/90 (43%), Positives = 56/90 (62%)
Query: 64 LKLVVMSATLEAEKF-QG--YFYGAP-LMKVPGRLHPVEIFYTQEPER-DYLEAAIRTVV 118
LKL++MSATL E F G F P L++VP R +PV I ++++ E DY+ A + V+
Sbjct: 416 LKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVM 475
Query: 119 QIHMCEPSGDILVFLTGEEEIEDACRKITK 148
IH P G ILVF+TG+ E++ C K+ K
Sbjct: 476 SIHKKLPQGGILVFVTGQREVDYLCEKLRK 505
Score = 158 (60.7 bits), Expect = 6.4e-80, Sum P(5) = 6.4e-80
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD 63
+++TDG+LLRE D LL RY VI+LDEAHER+L TD+L G+L V+K R +
Sbjct: 341 KFMTDGILLREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQE 392
Score = 107 (42.7 bits), Expect = 6.4e-80, Sum P(5) = 6.4e-80
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 469 KAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHP-SNCLDHKPEWVIYNEYVLTSRNFIRT 527
+A+ AG+ +VA R +Y + V LH S+ ++ PE ++Y+E +LT+R ++
Sbjct: 1010 EAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPELLVYSELLLTNRPYMHG 1069
Query: 528 VTDVRGEWLI 537
T VR EWL+
Sbjct: 1070 ATRVRPEWLV 1079
Score = 69 (29.3 bits), Expect = 6.4e-80, Sum P(5) = 6.4e-80
Identities = 15/71 (21%), Positives = 36/71 (50%)
Query: 380 RPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVR 439
R ++ ++ A+ RF + D LT+ H+++ + +C N ++ + + ++
Sbjct: 895 RKKDRKEKIKAARDRFSNPSSDALTVAYALHSFEVSENGMGFCEANGLHLKTMDEMSKLK 954
Query: 440 QQLVRIMARFN 450
QL+R++ FN
Sbjct: 955 DQLLRLV--FN 963
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 192/566 (33%), Positives = 302/566 (53%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL--KNRPD-----L 64
++LT+GMLL+E + DP L +Y +V+DE HER + D+L G LK++L ++P L
Sbjct: 242 KFLTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFLKQMLLSPDKPGRGGLPL 301
Query: 65 KLVVMSATLEAEKFQGYFY---------------GAPLMKVPGRLHPVEIFYTQEPERDY 109
K+V MSAT E + +F +K+ GR PVEI ++ +P
Sbjct: 302 KVVAMSATANIETLENFFSIPQDDRKAKAESDGKAEQTLKIEGRQFPVEIIHSPKPVPVL 361
Query: 110 LEAAIRTVVQIHMCEP-SGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYST 168
+ ++TV +IH EP GDILVFL G+E IE+ R I + + V +K +PL+
Sbjct: 362 ADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEEIQRLIEEYAATLASDVPKIKALPLFGQ 421
Query: 169 LPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPR 228
L Q F RK+V++TNIAETS+T+ G+ YVID G +K K Y
Sbjct: 422 LSMEAQHTAFRPLKGRV-------RKVVLATNIAETSVTVPGVRYVIDTGKSKMKQYRAS 474
Query: 229 VRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANT 288
+ +ESLLV ISK+SA QR+GRAGR PGKC+RLYTE + +++ PEILR+N+
Sbjct: 475 LGLESLLVDAISKSSAIQRAGRAGREAPGKCYRLYTEDVYK-EMRDADLPEILRNNVREA 533
Query: 289 VLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQ 348
L + G+DDL+ F MD P + +A+ LN LGA+DD+G +TE+G+KM+ P+
Sbjct: 534 ALIMMARGVDDLLTFPLMDTPKISRMEKAMVQLNILGAIDDEGAITELGKKMARLPVAAP 593
Query: 349 MSKMLVE--SPKYNCSNEILSISAMLSV-PNCF--VRPREAQKAADEAKARFGHIDGDHL 403
+ ++L+ SP Y+C E++ I + +S + F ++ EA++ +E + +GD +
Sbjct: 594 LGRVLLAAASPAYDCLLEVIDIISCISGGDDIFHQLQSEEAREEVEEYRRELRRREGDLM 653
Query: 404 TLLNVYHAYKQNNEDPS-WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRD 462
L Y N D + WC +N R ++ A N+R+QL + + L
Sbjct: 654 VYLTTMQMYTAENSDRTEWCKKRKINLRTMRQALNIRRQLRSLCVSEGM-LTEKPPPDPQ 712
Query: 463 YYV--------NIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLD-HKPEWVI 513
+V I K + G+ A L Y+T + VV +HPS+ L K E ++
Sbjct: 713 PFVPLSPEAAETITKCFMKGFCTSTAMLAPDLSYVTSQGKHVVAIHPSSSLHGQKKEAIM 772
Query: 514 YNEYVLTSRNFIRTVTDVRGEWLIDI 539
+ E+V T +++ + V ++ W+ ++
Sbjct: 773 FLEHVFTQKSYAKKVAVIQSVWIPEV 798
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 182/543 (33%), Positives = 297/543 (54%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+ +TDG+LL+E DPLL +Y +I++DEAHER+L D + GLLK VL+ R D ++V+ SA
Sbjct: 101 KVMTDGILLQEMKLDPLLSKYSIIMVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSA 160
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFY----------TQEPERDYLEAAIRTVVQIH 121
T+ F YF P++K+ +PV + + T+E E LE + V ++
Sbjct: 161 TINTAMFSRYFNECPVIKIDAVAYPVTVIFDPPDTPASTHTKEAEAALLEKIVCIVERVI 220
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXX 181
G IL+FL GE I++ +++ E + ++PLY L Q+++F
Sbjct: 221 ASRDKGAILIFLPGERSIKNCITRLSHE-----RWFRKLFLLPLYGRLSKEEQEQVFNRA 275
Query: 182 XXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISK 241
RK+V++TNIAETS+TID + VID G K YNP SL +PIS+
Sbjct: 276 PFGK-------RKVVIATNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTASLDETPISQ 328
Query: 242 ASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLV 301
AS +QR GRAGR + G C+RLY+ F +P T EI R++L+ V+ + +LGI D
Sbjct: 329 ASCNQRRGRAGRVRAGTCYRLYSRDDFEQR-EPYTLEEIYRTDLSEVVMRMAELGIHDFE 387
Query: 302 HFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVES-PKYN 360
HFDF+ PP ++ A + L LGAL+DD +L+E+G+ M FPL P+ S+M+VE+ +Y
Sbjct: 388 HFDFISPPGTHGIIGAEDTLRLLGALEDDRSLSEIGKMMCLFPLGPRQSRMIVEALRRYP 447
Query: 361 CS-NEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP 419
S +++L +A LS + + + ++ +A F GD ++ L +Y AY Q N
Sbjct: 448 HSIDDVLIAAAFLSARSPLIFSEDQEEKTKKAHGTFSDPMGDFVSFLRIYRAYAQENNKH 507
Query: 420 SWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQV 479
S+C +++ R + N+++QL I++ L + +Y + + M+ F+ V
Sbjct: 508 SFCQHFYLDERIMAEISNIKEQLELIVSGMGFPLLTGG-TVEEYLICVGTGMIQ--FVCV 564
Query: 480 AHLERTGQYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLID 538
+ + LT + +H+HP +C+ +P++++ E V TSR + +V+ + +
Sbjct: 565 QEHRDSYRSLTA---ECIHIHPGSCVYKDRPKFIVAGEIVRTSRMYAMSVSPLSKKIAEL 621
Query: 539 IAP 541
IAP
Sbjct: 622 IAP 624
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 441 (160.3 bits), Expect = 5.3e-77, Sum P(5) = 5.3e-77
Identities = 105/257 (40%), Positives = 151/257 (58%)
Query: 138 EIEDACRKITKEITNMGDQ--VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKI 195
E ED ++I D+ GP+ V+PLYSTLP + Q ++F+ R +
Sbjct: 822 EDEDEFEIGKEDIITEDDEKPAGPLFVLPLYSTLPTSKQMRVFQTPPLGS-------RLV 874
Query: 196 VVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQ 255
VV+TN+AETSLTI I YV+D G KQ+ YN + S V SKASA QR+GRAGRT
Sbjct: 875 VVATNLAETSLTIPNIKYVVDTGRVKQRYYNKDNGISSFEVGWTSKASADQRAGRAGRTG 934
Query: 256 PGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLM 315
PG C+R+Y+ FN+ Q + PEIL + +L +K +GI + F F PP +L
Sbjct: 935 PGHCYRIYSSAVFNDHFQQFSKPEILMIPIDGMILQMKSMGIQKITGFPFPTPPDESSLK 994
Query: 316 RALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSV 374
AL L LGAL+ ++TE+G KMS+FP+ P+ SKML+ ++NC I++I ++L+V
Sbjct: 995 LALRTLINLGALEVKTFSITELGMKMSQFPVSPRHSKMLLLGQEHNCLPYIIAIVSILTV 1054
Query: 375 PNCFVRPR-EAQKAADE 390
+ F++ EA + DE
Sbjct: 1055 KDPFLKEAYEANQNNDE 1071
Score = 161 (61.7 bits), Expect = 5.3e-77, Sum P(5) = 5.3e-77
Identities = 38/90 (42%), Positives = 55/90 (61%)
Query: 64 LKLVVMSATLEAEKFQG----YFYGAPLMKVPGRLHPVEIFYTQEPER-DYLEAAIRTVV 118
LKLVVMSATL E F + P++ +P R PV I + ++ E +Y++ + VV
Sbjct: 580 LKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHFNKKTELVNYIDECYKKVV 639
Query: 119 QIHMCEPSGDILVFLTGEEEIEDACRKITK 148
+IH PSG ILVF+TG++EIE C K+ +
Sbjct: 640 KIHKNLPSGGILVFVTGKQEIEYLCSKLRR 669
Score = 145 (56.1 bits), Expect = 5.3e-77, Sum P(5) = 5.3e-77
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKL 66
+++TDG+L+RE TD LL +Y I++DEAHER L TD+L GLL ++ R L L
Sbjct: 506 KFMTDGILMREVQTDFLLSQYSSILIDEAHERNLNTDILIGLLSRIVPLRKKLYL 560
Score = 71 (30.1 bits), Expect = 5.3e-77, Sum P(5) = 5.3e-77
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 380 RPREAQKAADEAKARFGHIDGDHLTLLNVYHAYK-QNNEDPS----WCYDNFVNHRALKS 434
R + Q+ + + ++ H + D L++L V AY Q + P +C NF+N +++
Sbjct: 1099 RQKHLQRLRNSMR-KWLHKESDLLSILKVVGAYDYQIRKSPKDIDHFCSQNFLNTKSMSE 1157
Query: 435 ADNVRQQLVRIMARFN 450
+R QL I+ N
Sbjct: 1158 IHKLRHQLTEIVNSIN 1173
Score = 70 (29.7 bits), Expect = 5.3e-77, Sum P(5) = 5.3e-77
Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 499 LHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWL 536
+HP++ L + + E+VIY + + TSR +++ VT++ WL
Sbjct: 1260 IHPTSNLGGVNTQAEYVIYCDIIETSRPYMKLVTEINPSWL 1300
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 454 (164.9 bits), Expect = 6.0e-77, Sum P(3) = 6.0e-77
Identities = 99/263 (37%), Positives = 155/263 (58%)
Query: 137 EEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIV 196
E+I+ + +T D+ P+ V+PLYS L Q K+F+ R +
Sbjct: 680 EDIDQVPTSSSSSVT-YDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGH-------RMCI 731
Query: 197 VSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQP 256
V+TN+AETS+TI I YV+D G AK++VYN + V+ V ISKA+A QR+GRAGRT P
Sbjct: 732 VATNVAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGP 791
Query: 257 GKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMR 316
G C+RLY+ F++ + PEILR+ + + VL +K + ID++ +F F P L +
Sbjct: 792 GHCYRLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEK 851
Query: 317 ALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPN 376
+L++L+ LGA+D +G LT++GE+MS FPL P+ SKML+ ++ C ++++ + LS+
Sbjct: 852 SLKLLSNLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQ 911
Query: 377 CFVRPREAQKAADEAKARFGHID 399
FV + A + +R D
Sbjct: 912 LFVSKQSLLYDAHDKNSRSEETD 934
Score = 274 (101.5 bits), Expect = 6.0e-77, Sum P(3) = 6.0e-77
Identities = 59/151 (39%), Positives = 91/151 (60%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD-------- 63
+++TDG+LLRE +D LL Y +++DEAHER++ TD+L GLL +++ R +
Sbjct: 496 KFMTDGILLRELSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKV 555
Query: 64 --LKLVVMSATLEAEKFQG----YFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTV 117
LKL++MSATL F + P++K+ R +PV I + + + DYL+ A V
Sbjct: 556 KPLKLIIMSATLRVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKV 615
Query: 118 VQIHMCEPSGDILVFLTGEEEIEDACRKITK 148
IH P+G ILVFLTG++E+E C+ + K
Sbjct: 616 CLIHKRLPAGSILVFLTGQQEVEQLCQMLRK 646
Score = 113 (44.8 bits), Expect = 6.0e-77, Sum P(3) = 6.0e-77
Identities = 40/163 (24%), Positives = 82/163 (50%)
Query: 391 AKARFGHIDGDH--LTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMAR 448
A +RF ID D L+LL+ AY ++ +C +N++ +AL+ N+R+Q++ ++ R
Sbjct: 957 AISRFQAIDPDAPALSLLSAVCAYDYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKR 1016
Query: 449 FNLKLCSNDFNSR---DYYVNI---RKAMLAGYFMQVAHLERTGQ-YLTV--KDNQVVHL 499
+ +++ F + V I R+ + + Y QVA ++ + Y+T+ ++VV
Sbjct: 1017 YMVRVEKEFFKLQLKPPTSVQIKALRQFIASAYIDQVALYDKEKRGYVTLFPSGSEVVQF 1076
Query: 500 HPSNCLDHKPEWVIYNEY--VLTSRNFIRTVTDVRGEWLIDIA 540
P + E+V+Y + R ++ +T++ E L +A
Sbjct: 1077 VPDRTYNIDSEYVVYLSLHESRSGRVYMSPLTEISPEHLARLA 1119
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 436 (158.5 bits), Expect = 9.5e-73, Sum P(4) = 9.5e-73
Identities = 101/261 (38%), Positives = 155/261 (59%)
Query: 135 GEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRK 194
G+E E+ KI +E G + V+PLYS LP Q ++FE R
Sbjct: 653 GDENEEEEF-KIEEEEAGTGPS--RMHVLPLYSLLPTKEQLRVFEPPPDGS-------RL 702
Query: 195 IVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRT 254
+V++TN+AETSLTI GI YV D G +K++ Y+ V+S V ISKASA+QR GRAGRT
Sbjct: 703 VVLATNVAETSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREGRAGRT 762
Query: 255 QPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETL 314
PG C+RLY+ + DL PE+LR++L VL LK + + +V+F F PP ++L
Sbjct: 763 GPGHCWRLYSSAVYERDLDEFALPELLRTSLEGVVLQLKSMNLQHVVNFPFPTPPERDSL 822
Query: 315 MRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSV 374
+++ ++L Y+ A+ ++G +T++G MS FPL P+ S++L+ +++C + +++ A LS
Sbjct: 823 VKSEKLLKYISAVSEEGRVTQVGYTMSIFPLSPRFSRILLLGHQHDCLHYTVTLVAALSA 882
Query: 375 PNCFVRPREA--QKAADEAKA 393
F+ +A Q AA E A
Sbjct: 883 AEIFIPENQAIPQLAAKEDDA 903
Score = 258 (95.9 bits), Expect = 9.5e-73, Sum P(4) = 9.5e-73
Identities = 58/149 (38%), Positives = 89/149 (59%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD-------- 63
+++TDG+LLRE D L +Y IV+DEAHER++ TD+L G+L ++K R +
Sbjct: 455 KFMTDGVLLREVAQDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTV 514
Query: 64 --LKLVVMSATLEAEKF---QGYFYGAP-LMKVPGRLHPVEIFYTQEPERDYLEAAIRTV 117
LKLV+MSATL E + F P +++V GR +PV + + ++ DY+E A R +
Sbjct: 515 KPLKLVIMSATLRIEDLTENKNLFATPPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKI 574
Query: 118 VQIHMCEPSGDILVFLTGEEEIEDACRKI 146
+ H P G +LVFLTG+ EI +++
Sbjct: 575 SRGHKKLPPGGMLVFLTGQNEITQLSKRL 603
Score = 77 (32.2 bits), Expect = 9.5e-73, Sum P(4) = 9.5e-73
Identities = 24/87 (27%), Positives = 44/87 (50%)
Query: 401 DHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSN-DFN 459
D + +L V + + WC +FV + LK A +RQQ+V+++ + N+ +N +F
Sbjct: 938 DAIKMLQVLGEFAHEPTE-KWCESHFVRFKVLKEAQKLRQQIVQLL-KTNIPSFANINFQ 995
Query: 460 SR-----DYYVNIRKAMLA-GYFMQVA 480
+ + V K M+A G+ +VA
Sbjct: 996 DKLDAPTEKQVKALKQMVAAGFIDRVA 1022
Score = 51 (23.0 bits), Expect = 9.5e-73, Sum P(4) = 9.5e-73
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 493 DNQVVHLHPSNCLDHK-----PEWVIYN 515
+ ++V++HPS+ L H P+++IYN
Sbjct: 1062 EEKLVYIHPSSPLAHLSTSECPDYIIYN 1089
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 566 (204.3 bits), Expect = 2.4e-71, Sum P(2) = 2.4e-71
Identities = 154/441 (34%), Positives = 235/441 (53%)
Query: 108 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 167
D +EA I + ++ E G ILVFLTG +EI KI +GD V+PL+
Sbjct: 488 DLVEATIEHICRL---EGGGAILVFLTGWDEISKLLEKINMN-NFLGDS-SKFLVLPLHG 542
Query: 168 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 227
++P Q++IF+ RKIV++TNIAE+S+TID +VYV+D G AK+ Y+
Sbjct: 543 SMPTVNQREIFDRPPPNK-------RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 595
Query: 228 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLA 286
+V LL S ISKASAHQR GRAGR Q G C+RLY + + D PQ PEI+R+ L
Sbjct: 596 LNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIY--DAFPQYQLPEIIRTPLQ 653
Query: 287 NTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFP 344
L +K L + + F + PP + A+E+L +GAL+D LT +G + P
Sbjct: 654 ELCLHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLP 713
Query: 345 LDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARF-GHIDGDHL 403
+DP + KML+ + C N L+I+A L+ + FV P ++ ADEAK F G DH+
Sbjct: 714 VDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAKRYFAGDSCSDHI 773
Query: 404 TLLNVYHAY---KQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNL--KLCSNDF 458
LL Y Y K+ + +C+ NF++ L+ +++R Q + +++ K N +
Sbjct: 774 ALLKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAY 833
Query: 459 NSRDYYVNIRKAML-AGYFMQVAHLERTGQYLT--VKDNQVVHLHPSNC-----LDHKPE 510
N Y + + A+L AG + V +R G+ K+ V +HP + L P
Sbjct: 834 NQYSYDMEMISAVLCAGLYPNVVQCKRRGKRTAFYTKELGKVDIHPGSVNARVNLFSLP- 892
Query: 511 WVIYNEYVLTSRNFIRTVTDV 531
+++Y+E V T+ +IR T++
Sbjct: 893 YLVYSEKVKTTSVYIRDSTNI 913
Score = 190 (71.9 bits), Expect = 2.4e-71, Sum P(2) = 2.4e-71
Identities = 38/89 (42%), Positives = 57/89 (64%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+ T G+LLR + DP L +++DE HER + D L +L+++L RPDL+L++MSAT
Sbjct: 327 FCTTGVLLRRLIEDPNLTNVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSAT 386
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPV-EIF 100
+ A+ F YF +P M +PG PV E+F
Sbjct: 387 INADMFSTYFGNSPTMHIPGFTFPVAELF 415
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 539 (194.8 bits), Expect = 1.3e-70, Sum P(2) = 1.3e-70
Identities = 141/431 (32%), Positives = 238/431 (55%)
Query: 124 EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXX 183
E G +LVF+TG ++I ++ + +GD V ++ + ++ + Q+ IF+
Sbjct: 576 ERPGAVLVFMTGWDDINSLKNQLEAH-SLLGDP-NKVLLLACHGSMASSEQRLIFDRPPE 633
Query: 184 XXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 243
RKIV++TN+AETS+TI+ +VYVID G AK+ Y+ LL S ISKA+
Sbjct: 634 GI-------RKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAA 686
Query: 244 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 303
A QR GRAGR PG+C+ LY + Q PE+LR+ L + L +K LG+ + F
Sbjct: 687 ARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQ-PELLRTPLQSLCLQIKSLGLGSISEF 745
Query: 304 --DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNC 361
+ PP ++ A+E L +GALDDD NLT +G+ +S P++P++ KML+ +NC
Sbjct: 746 LSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNC 805
Query: 362 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHID-GDHLTLLNVYHAYKQNNEDPS 420
+ ++++ A LSV + F+ P + + A+ A+++F D DHLTL+ Y+ +K S
Sbjct: 806 LDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHS 865
Query: 421 ---WCYDNFVNHRALKSADNVRQQLVRIMARF----NLKLCSNDFNSRDYYVNIRKAMLA 473
+C+ NF++ + LK+ D++R+Q ++ N++ CS S D ++ +R + A
Sbjct: 866 GYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSK--LSHDEHL-VRAIICA 922
Query: 474 GYF---MQVAHLERTGQYLTVKDNQVVHLHPSNCLDHKP----EWVIYNEYVLTSRNFIR 526
G F V + E++ T++D QV+ L+ S+ + P W+++N+ V + F+R
Sbjct: 923 GMFPGVCSVVNKEKSITLKTMEDGQVL-LYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLR 981
Query: 527 TVTDVRGEWLI 537
T V L+
Sbjct: 982 DSTAVSDSVLL 992
Score = 216 (81.1 bits), Expect = 1.3e-70, Sum P(2) = 1.3e-70
Identities = 46/101 (45%), Positives = 63/101 (62%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+ T G+LLR + D L+ +V+DE HER + D L +LK++L RPDLKL++MSAT
Sbjct: 398 FCTTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSAT 457
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAA 113
L AE F YF GAP M +PG +PV + + DYLE +
Sbjct: 458 LNAELFSSYFGGAPAMHIPGFTYPVRAHFLE----DYLETS 494
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 665 (239.2 bits), Expect = 1.9e-69, Sum P(2) = 1.9e-69
Identities = 161/440 (36%), Positives = 248/440 (56%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+ +TDG+LL E D LL +Y I++DEAHER+L D + G LK++L RPDLKL++ SA
Sbjct: 193 KLMTDGILLAEMQRDRLLLKYDTIIIDEAHERSLNIDFILGYLKQILIKRPDLKLIITSA 252
Query: 72 TLEAEKFQGYFYG-----APLMKVPGRLHPVEIFYT------------QEPER-DYLEAA 113
T++ ++F +F AP+++V GR PVE+ Y Q P+ D +
Sbjct: 253 TIDPQRFAKHFSSKNGLPAPIIEVSGRTFPVEMRYRPLNDRAVIDDDDQSPQEVDIISGI 312
Query: 114 IRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAM 173
+ V ++ C +GDILVFL GE EI D + K N+ V+PLY+ L +
Sbjct: 313 LSAVDELSDCG-NGDILVFLNGEREIRDTAAALVK--ANLRH----TNVLPLYARLTVSE 365
Query: 174 QQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVES 233
Q +IF+ R IV++TN+AETSLT+ GI YVIDPG A+ Y+ R +V+
Sbjct: 366 QNQIFKPHSG---------RNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 416
Query: 234 LLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 293
L + P+S+ASA+QRSGR GR G C RLY+E + + + T PEILR+NLA +L +
Sbjct: 417 LPIEPVSQASANQRSGRCGRVSEGICIRLYSEDDYKSRAE-FTDPEILRTNLATVILQMH 475
Query: 294 KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDD----DGN-----------LTEMGE 338
L + D+ +F F++ P + + +L + A++ D N LT+ G
Sbjct: 476 ALDLGDIANFPFVEAPDNRNITDGVRLLEEIAAVESIENADKNAKGKASSTATQLTKSGR 535
Query: 339 KMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHI 398
+++FP+DP+++KM+V S ++ C +IL I + LS+ + RP E Q+ +DE RF
Sbjct: 536 LLAKFPIDPRLAKMVVSSIEFGCIEQILIIVSALSIQDPRERPHEKQQLSDEKHNRFKDK 595
Query: 399 DGDHLTLLNVYHAYKQNNED 418
D ++LLN++ + +D
Sbjct: 596 SSDFISLLNLWQYINEQKKD 615
Score = 79 (32.9 bits), Expect = 1.9e-69, Sum P(2) = 1.9e-69
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 467 IRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFI 525
+ +A+L+G + + +Y + + + P + L K P+W++ E V TSR F
Sbjct: 693 VHQALLSGLLSHIGQQDENREYKGARGMKFF-IFPGSALTKKSPKWLMSAELVETSRLFA 751
Query: 526 RTVTDVRGEWLIDIAPH 542
R + WL +A H
Sbjct: 752 RMNAKIDPLWLEPLAQH 768
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 496 (179.7 bits), Expect = 3.0e-68, Sum P(2) = 3.0e-68
Identities = 129/394 (32%), Positives = 210/394 (53%)
Query: 121 HMCE--PSGDILVFLTGEEEIEDACRKITKEITNMGDQVGP-VKVVPLYSTLPPAMQQKI 177
++CE P G ILVFL G ++I + K T+ G + + V PL+S + QQ +
Sbjct: 415 YICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQAV 474
Query: 178 FEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVS 237
F RK+++ST IAETS+TID +VYVI+ G K Y+ ++SL
Sbjct: 475 FRRPPAGQ-------RKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEV 527
Query: 238 PISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGI 297
++KA+ QR GRAGR +PG C+ L++ ++ + + PEILRS L + +L+LK L I
Sbjct: 528 WVTKANTQQRRGRAGRVRPGICYNLFS-RAREDRMDDIPTPEILRSKLESIILSLKLLHI 586
Query: 298 DDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVE 355
DD F ++ P PE + +E+L + ALD G LT +G +++ P+DPQM KM++
Sbjct: 587 DDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILM 646
Query: 356 SPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFG-HIDGDHLTLLNVYHAYKQ 414
S + C + I S +A LS + F P + DE K R ++ DHL + N AY+
Sbjct: 647 SALFCCLDPITSAAAALSFKSPFYSPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRD 706
Query: 415 N---NEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSN--DF--NSRDYYVNI 467
+ + + +CY NF++ L+ + ++ Q ++ + SN D N + +
Sbjct: 707 SRYSHAERDFCYKNFLSSMTLQQLERMKNQFSELLYNYKFLASSNCKDAASNKNSEKIPL 766
Query: 468 RKAML-AGYFMQVAHLERTGQYLTVKDNQVVHLH 500
+A++ AG + +AHL ++ Q +K N+V +H
Sbjct: 767 LRAIIGAGLYPNMAHLRKSRQ---IK-NRVRAIH 796
Score = 232 (86.7 bits), Expect = 3.0e-68, Sum P(2) = 3.0e-68
Identities = 40/92 (43%), Positives = 65/92 (70%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LL++ +DPL+ V++LDE HER++ TD+L GLLK +L +RPDLK+++MSAT
Sbjct: 253 YCTTGVLLQQLQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSAT 312
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
+ + F YF P+ ++ G + PV++ Y ++
Sbjct: 313 VREQDFCDYFNNCPMFRIEGVMFPVKMLYLED 344
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 698 (250.8 bits), Expect = 4.9e-68, P = 4.9e-68
Identities = 165/459 (35%), Positives = 257/459 (55%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+LT+G+LLR+ D L +Y+V+++DE HER L D L G+L+ +L RPDL+LV+MSAT
Sbjct: 254 FLTEGLLLRQIQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRLVLMSAT 313
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQ-EPE-----------RDYLEAAIRTVVQI 120
+ + F YF AP+++VPGRL P+++ Y PE R YL ++ + Q
Sbjct: 314 INIKLFSSYFNDAPVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLDPRPYLRV-LQGIDQR 372
Query: 121 HMCEPSGDILVFLTGEEEI---EDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKI 177
+ E GD+L+FL+G EI ++AC+ T+ + V+PL+STL A Q K+
Sbjct: 373 YPQEERGDLLLFLSGVAEISTIQEACQTYA---THTQRWI----VLPLHSTLSLAQQDKV 425
Query: 178 FEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVS 237
F+ RK ++STNIAETS+TIDG+ +V+D G K+ ++P+ +++ L
Sbjct: 426 FDIAPPGV-------RKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEF 478
Query: 238 PISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGI 297
IS+AS+ QR GRAGRT PG C+RLY+E ++ P PEI R L + +L +K +G+
Sbjct: 479 WISRASSEQRKGRAGRTGPGVCYRLYSESDYDA-FAPYPVPEIHRVALDSLILQMKSMGL 537
Query: 298 DDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESP 357
D F F+DPP ++ A+ L GALD+ G LT +G +++ P+D + KMLV
Sbjct: 538 GDPRTFTFIDPPPASSIQTAVTYLREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGS 597
Query: 358 KYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNE 417
+N +L+++A LSV + F+R + A+ GD TL+N ++A+ Q
Sbjct: 598 VFNLVEPVLTVAAALSVQSPFLRSAQHNPDCSTARQPLNSNHGDPFTLMNTFNAWVQVKA 657
Query: 418 DPS-----WCYDNFVNHRALKSADNVRQQLVRIMARFNL 451
D WC + + L N+R+Q ++ L
Sbjct: 658 DRGSGSRKWCRRRGLEEQRLYEMVNLRRQFKELLRSHGL 696
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 682 (245.1 bits), Expect = 2.6e-66, P = 2.6e-66
Identities = 174/493 (35%), Positives = 261/493 (52%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+LT G+LLR+ +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT
Sbjct: 254 FLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSAT 313
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYT-QEPE-----RDYLEAA--IRTVVQI-HMC 123
+ F YF AP+++VPGRL P+ + Y QE E + L+ +R + I H
Sbjct: 314 INISLFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKY 373
Query: 124 EPS--GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXX 181
P GD+LVFL+G EI ++ V V+PL+S L A Q K+F+
Sbjct: 374 PPEERGDLLVFLSGMAEISAVLEAAQTYASHTQRWV----VLPLHSALSVADQDKVFDVA 429
Query: 182 XXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISK 241
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ +++ L IS+
Sbjct: 430 PPGV-------RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQ 482
Query: 242 ASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLV 301
ASA QR GRAGRT PG CFRLY E ++ P PEI R L + VL +K + + D
Sbjct: 483 ASAEQRKGRAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDSLVLQMKSMSVGDPR 541
Query: 302 HFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNC 361
F F++PP P +L A+ L GALD LT +G +++ P+D + KML+ ++
Sbjct: 542 TFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSL 601
Query: 362 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS- 420
+L+I+A LSV + F R ++ A+ GD TL NV++A+ Q + S
Sbjct: 602 VEPVLTIAAALSVQSPFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSR 661
Query: 421 ----WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNI--RKAMLAG 474
WC + L N+R+Q ++ L + D Y + R+ A
Sbjct: 662 NSRKWCRRRGIEEHRLYEMANLRRQFKELLEDHGLLAGAQAAQVGDSYSRLQQRRERRAL 721
Query: 475 YFMQVAHLERTGQ 487
+ ++ H E G+
Sbjct: 722 HQLKRQHEEGAGR 734
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 681 (244.8 bits), Expect = 3.4e-66, P = 3.4e-66
Identities = 176/505 (34%), Positives = 261/505 (51%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+LT G+LLR+ +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+V+MSAT
Sbjct: 254 FLTVGLLLRQMQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSAT 313
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYT-QEPE-----------RDYLEAAIRTVVQI 120
+ F YF AP+++VPGRL P+ + Y QE E R +L + +
Sbjct: 314 INISLFSSYFGNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRV-LEAIDNK 372
Query: 121 HMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEX 180
+ E GD+LVFL+G EI ++ V V+PL+S L A Q K+F+
Sbjct: 373 YPPEERGDLLVFLSGMAEISAVLEPAQAYASHTQRWV----VLPLHSALSVADQDKVFDV 428
Query: 181 XXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPIS 240
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ +++ L IS
Sbjct: 429 APPGV-------RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWIS 481
Query: 241 KASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDL 300
+ASA QR GRAGRT PG CFRLY E ++ P PEI R L VL +K + + D
Sbjct: 482 QASAEQRKGRAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDP 540
Query: 301 VHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYN 360
F F++PP P +L A+ L GALD LT +G +++ P+D + KML+ ++
Sbjct: 541 RTFPFIEPPPPTSLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFH 600
Query: 361 CSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ-----N 415
+ +L+I+A LSV F R ++ + GD TLLNV++ + Q
Sbjct: 601 LAEPVLTIAAALSVQTPFTRSAQSNPECAATRRPLESDQGDPFTLLNVFNTWVQVKSERG 660
Query: 416 NEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNI--RKAMLA 473
WC + L N+R+Q ++ L + D Y + R+ A
Sbjct: 661 RNSRKWCRHRGIEEHRLYEMANLRRQFKELLEDHGLLAGAQAPQPGDSYSRLQRRRERQA 720
Query: 474 GYFMQVAHLERTGQ---YLTVKDNQ 495
Y ++ H E G+ L V+D+Q
Sbjct: 721 LYELKRRHEEGVGRKRKVLRVQDDQ 745
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 467 (169.5 bits), Expect = 6.3e-66, Sum P(2) = 6.3e-66
Identities = 106/250 (42%), Positives = 154/250 (61%)
Query: 135 GEEEIEDACRKITKEITNMGDQVG-PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXR 193
GE+E ED + +E+ G P+ V+PLYS LP Q ++F+ R
Sbjct: 704 GEDE-EDEEEEGFEEVLTEGQTANDPLYVLPLYSLLPTKEQMRVFQKPPQGS-------R 755
Query: 194 KIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGR 253
+V+TN+AETSLTI G+ YV+D G +K++ YN V+S V +SKASA+QRSGRAGR
Sbjct: 756 LCIVATNVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGR 815
Query: 254 TQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPET 313
T PG C+RLY+ F +D + + PEILR + + VL +K + I ++++F F PP
Sbjct: 816 TGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVA 875
Query: 314 LMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS 373
L +A+++L YLGALD+ +TE G+KMS FPL P+ SKML+ S + C I++I + LS
Sbjct: 876 LSKAIQLLQYLGALDNKEMITEDGKKMSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALS 935
Query: 374 VPNCFVRPRE 383
V + F+ E
Sbjct: 936 VGDPFINEFE 945
Score = 246 (91.7 bits), Expect = 6.3e-66, Sum P(2) = 6.3e-66
Identities = 58/153 (37%), Positives = 85/153 (55%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL-------KNRP-- 62
+++TDG+LLRE M D L +Y I++DEAHER + TD+L G+L + K P
Sbjct: 490 KFMTDGVLLREMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIE 549
Query: 63 --DLKLVVMSATLEAEKFQG----YFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRT 116
LKL++MSATL F + P+++V R PV I + + +Y + A R
Sbjct: 550 HKKLKLIIMSATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRK 609
Query: 117 VVQIHMCEPSGDILVFLTGEEEIEDACRKITKE 149
+IH P G ILVFLTG++EI +++ KE
Sbjct: 610 TCKIHQKLPPGAILVFLTGQQEITHMVKRLRKE 642
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 677 (243.4 bits), Expect = 8.9e-66, P = 8.9e-66
Identities = 173/493 (35%), Positives = 260/493 (52%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+LT G+LLR+ +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT
Sbjct: 253 FLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSAT 312
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYT-QEPE-----RDYLEAA--IRTVVQI---H 121
+ F YF AP+++VPGRL P+ + Y QE E + L+ +R + I +
Sbjct: 313 INISLFSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKY 372
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXX 181
E GD+LVFL+G EI + + + V+PL+S L A Q K+F+
Sbjct: 373 PPEERGDLLVFLSGMAEISS----VLEAAQTYASRTQRWVVLPLHSALSVADQDKVFDVA 428
Query: 182 XXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISK 241
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ ++ L IS+
Sbjct: 429 PPGV-------RKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQ 481
Query: 242 ASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLV 301
ASA QR GRAGRT PG CFRLY E ++ P PEI R L VL +K + + D
Sbjct: 482 ASAEQRKGRAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPR 540
Query: 302 HFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNC 361
F F++PP P +L A+ L GALD LT +G +++ P+D + KML+ ++
Sbjct: 541 TFPFIEPPPPASLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHL 600
Query: 362 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS- 420
+ +L+I+A LSV + F R ++ A+ GD TL NV++A+ Q + S
Sbjct: 601 AEPVLTIAAALSVQSPFTRSAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSR 660
Query: 421 ----WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNI--RKAMLAG 474
WC + L N+R+Q ++ L + D Y + R+ A
Sbjct: 661 NSRKWCRHRGIEEHRLYEMANLRRQFKELLEDHGLLARAQAPTPGDSYHRLQQRRERRAL 720
Query: 475 YFMQVAHLERTGQ 487
Y ++ H E G+
Sbjct: 721 YRLKRQHEEGGGR 733
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 677 (243.4 bits), Expect = 1.0e-65, P = 1.0e-65
Identities = 173/493 (35%), Positives = 260/493 (52%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+LT G+LLR+ +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT
Sbjct: 258 FLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSAT 317
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYT-QEPE-----RDYLEAA--IRTVVQI---H 121
+ F YF AP+++VPGRL P+ + Y QE E + L+ +R + I +
Sbjct: 318 INISLFSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKY 377
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXX 181
E GD+LVFL+G EI + + + V+PL+S L A Q K+F+
Sbjct: 378 PPEERGDLLVFLSGMAEISS----VLEAAQTYASRTQRWVVLPLHSALSVADQDKVFDVA 433
Query: 182 XXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISK 241
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ ++ L IS+
Sbjct: 434 PPGV-------RKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQ 486
Query: 242 ASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLV 301
ASA QR GRAGRT PG CFRLY E ++ P PEI R L VL +K + + D
Sbjct: 487 ASAEQRKGRAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPR 545
Query: 302 HFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNC 361
F F++PP P +L A+ L GALD LT +G +++ P+D + KML+ ++
Sbjct: 546 TFPFIEPPPPASLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHL 605
Query: 362 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS- 420
+ +L+I+A LSV + F R ++ A+ GD TL NV++A+ Q + S
Sbjct: 606 AEPVLTIAAALSVQSPFTRSAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSR 665
Query: 421 ----WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNI--RKAMLAG 474
WC + L N+R+Q ++ L + D Y + R+ A
Sbjct: 666 NSRKWCRHRGIEEHRLYEMANLRRQFKELLEDHGLLARAQAPTPGDSYHRLQQRRERRAL 725
Query: 475 YFMQVAHLERTGQ 487
Y ++ H E G+
Sbjct: 726 YRLKRQHEEGGGR 738
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 518 (187.4 bits), Expect = 2.3e-65, Sum P(2) = 2.3e-65
Identities = 138/433 (31%), Positives = 237/433 (54%)
Query: 121 HMCEPSGD--ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIF 178
++CE G IL+FLTG ++I K+ +I + V ++ + ++ Q+ IF
Sbjct: 491 NICENEGPGGILIFLTGWDDISSLKEKL--QIHPIFGNPDLVMLLACHGSMETFEQRLIF 548
Query: 179 EXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 238
E RKIV++TNIAETS+TI+ + +VID G AK+ Y+ LL S
Sbjct: 549 EEPASGV-------RKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSW 601
Query: 239 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGID 298
ISK SA QR GRAGR +PG+C+ LY + ++ + Q PEILR+ L + L +K L +
Sbjct: 602 ISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQL-PEILRTPLHSLCLQIKSLNLG 660
Query: 299 DLVHFDFMDPPAPETL--MRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVES 356
+ F +PE L +A+ L +GALD++ +LT +G +S+ P++P++ KML+
Sbjct: 661 SISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILG 720
Query: 357 PKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNN 416
C + IL+++A LSV + F+ P++ + A+ AK++F DHL L+ Y +K+
Sbjct: 721 AILGCLDPILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAE 780
Query: 417 EDPS---WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDF--NSRDYYVNIRKAM 471
E+ + +C+ NF++ ++L++ D++R++ ++ L + N NS N+ +A+
Sbjct: 781 EESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGL-IDGNPSICNSEGNDANLTRAV 839
Query: 472 LA-GYF---MQVAHLERTGQYLTVKDNQVV-HLHPSNCLDHK-P-EWVIYNEYVLTSRNF 524
+ G + V H ER+ T++D QV+ + + N + K P W+++NE + + F
Sbjct: 840 ICYGMYPGICSVVHNERSFSLKTMEDGQVLLYSNSENARETKIPYPWLVFNEKIKVNSVF 899
Query: 525 IRTVTDVRGEWLI 537
+R T LI
Sbjct: 900 LRDSTACSDSTLI 912
Score = 186 (70.5 bits), Expect = 2.3e-65, Sum P(2) = 2.3e-65
Identities = 37/92 (40%), Positives = 58/92 (63%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+ T G+LLR + D L +++DE HER + D L +LK++L R +LKL++MSAT
Sbjct: 319 FCTTGILLRRLLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSAT 378
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
L+AE F YF GA ++ +PG +PV + ++
Sbjct: 379 LDAELFSSYFGGAGVIYIPGFTYPVRSHFLED 410
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 669 (240.6 bits), Expect = 6.8e-65, P = 6.8e-65
Identities = 178/475 (37%), Positives = 251/475 (52%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+LT G+LLR +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT
Sbjct: 254 FLTVGLLLRHVQREPTLPQYRVLIVDEVHERHLHNDFLLGVLQRLLPRRPDLKVILMSAT 313
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQ---EPERDYLEAA-----IRTVVQI---H 121
+ F YF AP+++VPGRL P+ + Y EP LE IR + I +
Sbjct: 314 VNTSLFSAYFGQAPVVQVPGRLFPITVVYQPQEAEPTASTLEKLDPRPFIRVLEAIDSKY 373
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXX 181
E GD+LVFL+G EI G V V+PL+STL A Q K+F+
Sbjct: 374 PPEERGDLLVFLSGLAEIGAVLEAAQAHARRSGRWV----VLPLHSTLSVAAQDKVFDVA 429
Query: 182 XXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISK 241
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ +++ L IS+
Sbjct: 430 PPGV-------RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQ 482
Query: 242 ASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLV 301
ASA QR GRAGRT PG CFRLY E ++ P PEI R L VL +K + + D
Sbjct: 483 ASAEQRKGRAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPR 541
Query: 302 HFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNC 361
F F++PP +L A+ L GALD LT +G +++ P+D + KMLV +
Sbjct: 542 TFPFIEPPPAASLETAILYLRDQGALDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHL 601
Query: 362 SNEILSISAMLSVPNCFVRP-REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS 420
+ +L+I+A LSV + F R R K A A H GD TL NV++ + Q D S
Sbjct: 602 AEPVLTIAAALSVQSPFTRSTRSNPKCAWRA-LESDH--GDPFTLFNVFNNWVQVKSDRS 658
Query: 421 -----WCY-DNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRK 469
WC + HR + A N+R+Q ++ L + D Y +R+
Sbjct: 659 TKSRRWCRREGIEEHRLYEMA-NLRRQFKELLEDHGLLAGTQAPKPGDSYSRLRQ 712
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 495 (179.3 bits), Expect = 6.9e-65, Sum P(2) = 6.9e-65
Identities = 143/438 (32%), Positives = 233/438 (53%)
Query: 118 VQIHMC--EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQ 175
V H+C E G +LVFLTG ++I +I K +GD V ++ + ++ A Q+
Sbjct: 529 VLCHICRKERPGAVLVFLTGWDDIRSLSDQI-KAHPLLGDP-NRVLLLMCHGSMATAEQR 586
Query: 176 KIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLL 235
IFE RKIV++TN+AE S+TI+ +V+V+D G AK+ Y+ LL
Sbjct: 587 LIFERAPPNI-------RKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLL 639
Query: 236 VSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKL 295
S IS+ASA QR GRAGR PG+C+ LY + ++ + Q PE+LR+ L + L +K L
Sbjct: 640 PSWISQASARQRRGRAGRLFPGECYHLYPKCVYDAFAEYQL-PELLRTPLNSLCLQIKSL 698
Query: 296 GIDDLVHFDFMDPPAPETL--MRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKML 353
++ + F APE+L A+ L +GALD+ NLT++G+ +S P+DP++ KML
Sbjct: 699 QVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKML 758
Query: 354 VESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHID-GDHLTLLNVYHAY 412
+ + C + IL+I + LSV + F+ P++ + A AK RF D DH+ L+ + +
Sbjct: 759 IMGAIFRCFDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDHMALVRAFEGW 818
Query: 413 KQNNEDPS---WCYDNFVNHRALKSADNVRQQLVRIMARFNL---KLCSNDFNSRDYYVN 466
K + S +C+ NF++ + L++ ++R+Q I+ L L N+ S + +
Sbjct: 819 KDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSHNQSL- 877
Query: 467 IRKAMLAGYFMQVA---HLERTGQYLTVKDNQVVHLHPSNCLDHKPE----WVIYNEYVL 519
+R + +G F +A H E + + T+ D QV L+ ++ P W+++ E V
Sbjct: 878 VRAVICSGLFPGIASVVHRETSMSFKTMDDGQV-SLYANSVNSRFPTIPYPWLVFGEKVK 936
Query: 520 TSRNFIRTVTDVRGEWLI 537
+ IR T V LI
Sbjct: 937 VNAVLIRDSTGVPDSSLI 954
Score = 206 (77.6 bits), Expect = 6.9e-65, Sum P(2) = 6.9e-65
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+ T G+LLR ++D L + +DE HER + D L +LKE+L RPDL+LV+MSAT
Sbjct: 359 FCTSGILLRRLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSAT 418
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
L AE F Y+ GAP + +PG HPV+ + ++
Sbjct: 419 LNAELFSNYYGGAPTIHIPGFTHPVKAHFLED 450
Score = 40 (19.1 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 297 IDDLVHFDFMDPPAPETLMRALEVLNYL 324
+D + F FMDP E+ ++ E L+ L
Sbjct: 972 LDGYIDF-FMDPNLAESYVKLKEELDKL 998
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 660 (237.4 bits), Expect = 6.4e-64, P = 6.4e-64
Identities = 166/452 (36%), Positives = 250/452 (55%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+LT G+LLR+ +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT
Sbjct: 256 FLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSAT 315
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYT-QEPER-----DYLEAA--IRTVVQI---H 121
+ F YF AP+++VPGRL P+ + Y QE ++ + L+ +R + I +
Sbjct: 316 INISLFSSYFSHAPVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKY 375
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXX 181
E GD+LVFL+G EI + ++ + V+PL+S L + Q K+F+
Sbjct: 376 PPEERGDLLVFLSGMAEITTVL-DAAQAYASLTQRW---VVLPLHSALSVSDQDKVFDVA 431
Query: 182 XXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISK 241
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ +++ L IS+
Sbjct: 432 PAGV-------RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQ 484
Query: 242 ASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLV 301
ASA QR GRAGRT PG C+RLY E ++ P PEI R L VL +K + + D
Sbjct: 485 ASAEQRKGRAGRTGPGVCYRLYAESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPR 543
Query: 302 HFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNC 361
F F++PP P ++ A+ L GALD LT +G +++ P+D + KML+ ++
Sbjct: 544 TFPFIEPPPPASVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSL 603
Query: 362 SNEILSISAMLSVPNCFVRPREAQKAADEAKAR--FGHIDGDHLTLLNVYHAYKQNNEDP 419
+ +L+I+A LSV + F R AQ D A AR GD TL NV++A+ Q +
Sbjct: 604 AEPVLTIAAALSVQSPFTR--SAQSNLDCATARRPLESDQGDPFTLFNVFNAWVQVKSER 661
Query: 420 S-----WCYDNFVNHRALKSADNVRQQLVRIM 446
S WC V L N+R+Q ++
Sbjct: 662 SGNSRKWCRRRGVEEHRLYEMANLRRQFKELL 693
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 450 (163.5 bits), Expect = 6.5e-63, Sum P(3) = 6.5e-63
Identities = 118/381 (30%), Positives = 197/381 (51%)
Query: 92 GRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEIT 151
G + +E+ + + D + A IR +V + E G ILVFL G + I + ++
Sbjct: 438 GTIDALEMMDDDKVDLDLIAALIRHIV---LEEEDGAILVFLPGWDNISTLHDLLMSQVM 494
Query: 152 NMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGI 211
D+ ++PL+S +P Q ++F+ RKIV++TNIAETS+TID +
Sbjct: 495 FKSDRF---IIIPLHSLMPTVNQTQVFKKTPPGV-------RKIVIATNIAETSITIDDV 544
Query: 212 VYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT--EKSFN 269
V+VID G K+ ++ + + ++ +SKA+A QR GRAGR QPG C+ LY S
Sbjct: 545 VFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLL 604
Query: 270 NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGAL 327
+D Q PEILR+ L L +K L + + +F MDPP+ + +M A+ L L AL
Sbjct: 605 DDYQ---LPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNAL 661
Query: 328 DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKA 387
D LT +G ++ P++P + KM++ + C + +L+I+A LS + FV P +K
Sbjct: 662 DRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKV 721
Query: 388 ADEAKARFG-HIDGDHLTLLNVYHAYKQNNE-----DPSWCYDNFVNHRALKSADNVRQQ 441
AD + + DHLT++N + +++ + +C++ F++ L+ N++ Q
Sbjct: 722 ADARRKELSKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQ 781
Query: 442 LVRIMARFNLKLCSNDFNSRD 462
+ L + NSRD
Sbjct: 782 FAEHL------LAAGFVNSRD 796
Score = 194 (73.4 bits), Expect = 6.5e-63, Sum P(3) = 6.5e-63
Identities = 39/85 (45%), Positives = 55/85 (64%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G++L+ +D L +VLDE HER L +DVL ++K++L R DLK+++MSAT
Sbjct: 290 YCTTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSAT 349
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPV 97
L AEKF YF P++ +PG PV
Sbjct: 350 LNAEKFSEYFDNCPMIHIPGFTFPV 374
Score = 58 (25.5 bits), Expect = 6.5e-63, Sum P(3) = 6.5e-63
Identities = 28/129 (21%), Positives = 58/129 (44%)
Query: 418 DPSWCYDNFVNHRALKSADNVRQQLVR--IMARFNLKLCSNDFNSRDYYVN--IRKAML- 472
+ +C++ F++ L+ N++ Q + A F D S N + KA++
Sbjct: 758 EKDYCWEYFLSPNTLQMLHNMKGQFAEHLLAAGFVNSRDPKDPKSNTNSDNEKLLKAVIC 817
Query: 473 AGYFMQVAHL------ERTGQYLTVKDNQVVHLHPSNCLDHKPE----WVIYNEYVLTSR 522
AG + +VA + +R + K + V++HP + + E W++Y+ + TS
Sbjct: 818 AGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSS 877
Query: 523 NFIRTVTDV 531
++ T+V
Sbjct: 878 IYLYDCTEV 886
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 455 (165.2 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
Identities = 126/423 (29%), Positives = 217/423 (51%)
Query: 76 EKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTG 135
E++ GY + VE+ ++ + + + A IR +V + E G ILVFL G
Sbjct: 443 ERWPGYLRELRQRYSASTVDVVEMMDDEKVDLNLIAALIRYIV---LEEEDGAILVFLPG 499
Query: 136 EEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKI 195
+ I + ++ D+ ++PL+S +P Q ++F+ RKI
Sbjct: 500 WDNISTLHDLLMSQVMFKSDKF---IIIPLHSLMPTVNQTQVFKRTPPGV-------RKI 549
Query: 196 VVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQ 255
V++TNIAETS+TID +VYVID G K+ ++ + + ++ +SKA+A QR GRAGR Q
Sbjct: 550 VIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQ 609
Query: 256 PGKCFRLYTE--KSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAP 311
PG C+ LY S +D Q PEILR+ L L +K L + + HF MDPP+
Sbjct: 610 PGHCYHLYNSLRASLLDDYQ---LPEILRTPLEELCLQIKILRLGGIAHFLSRLMDPPSN 666
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
E ++ +++ L L ALD LT +G ++ P++P + KM++ + C + +L+I+A
Sbjct: 667 EAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS 726
Query: 372 LSVPNCFVRPREAQKAADEAKARFGH-IDGDHLTLLNVYHAYKQNNE-----DPSWCYDN 425
LS + FV P +K AD + DHLT++N + +++ + + +C++
Sbjct: 727 LSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFKGWEKAKQRGFRYEKDYCWEY 786
Query: 426 FVNHRALKSADNVRQQLVRIM--ARF----NLKLCSNDFNSRDYYVNIRKAMLAGYFMQV 479
F++ L+ N++ Q + A F N + ++ NS + + I+ + AG + +V
Sbjct: 787 FLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQDPESNINSDNEKI-IKAVICAGLYPKV 845
Query: 480 AHL 482
A +
Sbjct: 846 AKI 848
Score = 212 (79.7 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
Identities = 43/85 (50%), Positives = 57/85 (67%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G++L+ +DP L IVLDE HER L +DVL ++K++L RPDLK+V+MSAT
Sbjct: 311 YCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSAT 370
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPV 97
L AEKF YF P++ +PG PV
Sbjct: 371 LNAEKFSEYFGNCPMIHIPGFTFPV 395
Score = 63 (27.2 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 30/130 (23%), Positives = 63/130 (48%)
Query: 418 DPSWCYDNFVNHRALKSADNVRQQLVRIM--ARF----NLKLCSNDFNSRDYYVNIRKAM 471
+ +C++ F++ L+ N++ Q + A F N + ++ NS + + I+ +
Sbjct: 779 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQDPESNINSDNEKI-IKAVI 837
Query: 472 LAGYFMQVA----HLERTGQYLTV--KDNQVVHLHPSNCLDHKPE----WVIYNEYVLTS 521
AG + +VA +L + + + V K + VV +HP + + E W+IY+ + TS
Sbjct: 838 CAGLYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVEQTEFNYNWLIYHLKMRTS 897
Query: 522 RNFIRTVTDV 531
++ T+V
Sbjct: 898 SIYLYDCTEV 907
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 420 (152.9 bits), Expect = 2.1e-61, Sum P(3) = 2.1e-61
Identities = 110/350 (31%), Positives = 183/350 (52%)
Query: 108 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 167
+ +EA + +V P G +L+FL G EI+ ++ V PL+S
Sbjct: 822 ELIEALLEWIVDGKHSYPPGAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHS 881
Query: 168 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 227
+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y+P
Sbjct: 882 SLSSEEQQSVFLRPPAGVI-------KIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDP 934
Query: 228 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 287
+ESL + +S+A+A QR GRAGR G CF L++ +N+ L Q PEI R L
Sbjct: 935 SKGMESLEDTFVSRANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQ 994
Query: 288 TVLTLKKLGIDDL--VHF---DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSE 342
L +K L + +H ++PP E+L + L LGAL D LT +G ++
Sbjct: 995 LCLRIKILEMFSAQSLHSVLSRLIEPPRTESLRASKLRLQDLGALTADEKLTPLGYHLAS 1054
Query: 343 FPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDH 402
P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A++ K F + D+
Sbjct: 1055 LPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPWDKREEANKKKLDFAVGNSDY 1114
Query: 403 LTLLNVYHAYKQNNEDPS-----WCYDNFVNHRALKSADNVRQQLVRIMA 447
L LL Y ++ + ++ S +C +NF++ R L+ ++++Q +++
Sbjct: 1115 LALLQAYKGWRLSTKEGSQASYNYCRENFLSGRVLQEIASLKRQFTELLS 1164
Score = 213 (80.0 bits), Expect = 2.1e-61, Sum P(3) = 2.1e-61
Identities = 39/92 (42%), Positives = 61/92 (66%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR D L+ +++DE HERT +D L +LK+++ RPDL++++MSAT
Sbjct: 636 YCTTGVLLRRLEGDLTLQGITHVIVDEVHERTEESDFLLLVLKDIMVQRPDLRIILMSAT 695
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
L AE F YF+ P++ +PGR PV+ F+ ++
Sbjct: 696 LNAELFSQYFHSCPIINIPGRTFPVDQFFLED 727
Score = 64 (27.6 bits), Expect = 2.1e-61, Sum P(3) = 2.1e-61
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 487 QYLTVKDNQVVHLHPSNC---LDH-KPEWVIYNEYVLTSRNFIR 526
+++T K++ VH+HPS+ H + +++Y+E + TSR FIR
Sbjct: 1247 KFVT-KNDGYVHIHPSSVNYQTRHFESPYLVYHEKIKTSRVFIR 1289
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 362 (132.5 bits), Expect = 2.5e-61, Sum P(3) = 2.5e-61
Identities = 94/235 (40%), Positives = 132/235 (56%)
Query: 159 PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 218
P+ V+PLYS L P Q K+F R VV+TN+AETSLTI GI YV+D G
Sbjct: 579 PLYVLPLYSLLAPEQQAKVFRPPPAGS-------RLCVVATNVAETSLTIPGIKYVVDCG 631
Query: 219 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 278
K++ Y+ V S V+ IS+ASA+QR+GRAGRT+PG C+RLY+ F D +
Sbjct: 632 RVKKRFYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFG-DFSLFSEA 690
Query: 279 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD---GNLTE 335
EI R + + VL +K L I+ +V+F F PP+ E L+ A E+L LGAL+ G L+E
Sbjct: 691 EITRRPVEDLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRLSE 750
Query: 336 M------------GEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCF 378
M G M+ FP+ P+ +KML + C I++I + ++V F
Sbjct: 751 MEKARLSCPISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTVREIF 805
Score = 275 (101.9 bits), Expect = 2.5e-61, Sum P(3) = 2.5e-61
Identities = 61/146 (41%), Positives = 89/146 (60%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV--LKNRPDL--KLV 67
+ +TDG+LL+E D LL++Y VI++DEAHER++ TD+L GLL + L+N+ L KL+
Sbjct: 346 KVMTDGVLLKEIQRDFLLQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLI 405
Query: 68 VMSATLEAEKF---QGYFYGAP-LMKVPGRLHPVEIFYTQE-PERDYLEAAIRTVVQIHM 122
+MSATL E F + F P ++KV R V + + + P DY R + +IH
Sbjct: 406 IMSATLRVEDFTENKRLFSSPPPVIKVEARQFAVTVHFNKRTPMDDYTGETFRKICKIHR 465
Query: 123 CEPSGDILVFLTGEEEIEDACRKITK 148
P G ILVFLTG+ E+ CR++ K
Sbjct: 466 MLPPGGILVFLTGQAEVHSVCRRLRK 491
Score = 105 (42.0 bits), Expect = 2.5e-61, Sum P(3) = 2.5e-61
Identities = 41/164 (25%), Positives = 74/164 (45%)
Query: 400 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR----IMARFNLKLCS 455
GD + LL A + P +C +N + +A+ +R QL + A ++ + +
Sbjct: 845 GDLMVLLGAVGACEFAGLTPQFCEENGLRFKAMLEIRRLRGQLTNAVNAVCADADVYVDN 904
Query: 456 NDFNSRDYYVN-IRKAMLAGYFMQVAHLERTGQYLTVKDNQV---------VHLHPSNCL 505
+ V +R+ +LAG +A + + L K V +HPS+ L
Sbjct: 905 KMAPPTEAQVLCLRQIVLAGLGDHIARRVQAEELLDPKWRNAYKTPLLDDPVFIHPSSAL 964
Query: 506 DHK--PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 547
HK PE+V+Y E + T++ ++R V V+ +W+ + P Y S
Sbjct: 965 -HKTLPEFVVYQEIMETTKMYMRGVCAVQDDWIPKLLPQYCHFS 1007
Score = 37 (18.1 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 6/29 (20%), Positives = 16/29 (55%)
Query: 221 KQKVYNPRVRVESLLVSPISKASAHQRSG 249
K+ V PR+ +++ P+ + +++G
Sbjct: 519 KKNVSLPRINLDNYSALPVDEGDEDRQAG 547
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 368 (134.6 bits), Expect = 6.1e-61, Sum P(3) = 6.1e-61
Identities = 95/251 (37%), Positives = 139/251 (55%)
Query: 159 PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 218
P+ V+PLYS L P Q ++F+ R VV+TN+AETSLTI GI YV+D G
Sbjct: 585 PLHVLPLYSLLAPEKQAQVFQPPPEGT-------RLCVVATNVAETSLTIPGIKYVVDCG 637
Query: 219 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 278
K++ Y+ V S V+ +S+ASA QR+GRAGRT+PG C+RLY+ F D + P
Sbjct: 638 KVKKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFG-DFEKYPPP 696
Query: 279 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGN------ 332
EI R + + +L +K L I+ +++F F PP+ E L+ A E+L LGAL
Sbjct: 697 EITRRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKTERVKQ 756
Query: 333 ---------LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 383
+TE+G M+ FP+ P+ +KML S ++ C ++I A ++V F +
Sbjct: 757 LQRSRLSCPITELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTVRELF-EELD 815
Query: 384 AQKAADEAKAR 394
A+DE AR
Sbjct: 816 RPAASDEELAR 826
Score = 281 (104.0 bits), Expect = 6.1e-61, Sum P(3) = 6.1e-61
Identities = 62/146 (42%), Positives = 90/146 (61%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL----KNRPDLKLV 67
+++TDG+LL+E D LL +YKV+++DEAHER++ TD+L GLL ++ K LKL+
Sbjct: 344 KFMTDGVLLKEIQKDFLLLKYKVVIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLL 403
Query: 68 VMSATLEAEKF---QGYF-YGAPLMKVPGRLHPVEIFYTQE-PERDYLEAAIRTVVQIHM 122
+MSATL E F Q F P++KV R PV + + + P DY R V +IH
Sbjct: 404 IMSATLRVEDFTQNQRLFTQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHR 463
Query: 123 CEPSGDILVFLTGEEEIEDACRKITK 148
P+G ILVFLTG+ E+ CR++ +
Sbjct: 464 MLPAGGILVFLTGQAEVHALCRRLRR 489
Score = 87 (35.7 bits), Expect = 6.1e-61, Sum P(3) = 6.1e-61
Identities = 37/159 (23%), Positives = 69/159 (43%)
Query: 400 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR----IMARFNLKLCS 455
GD + LL A + P +C N + ++A+ +R QL + L +
Sbjct: 851 GDLMVLLGAVGACEYAGCSPQFCEANGLRYKAMMEIRRLRGQLTTAANTMCPEAGLFVDP 910
Query: 456 N-DFNSRDYYVNIRKAMLAGYFMQVAHLERT---------GQYLTVKDNQVVHLHPSNCL 505
+ D +R+ + AG +A ++ Y T + V +HPS+ L
Sbjct: 911 KMQPPNEDQVTYLRQIVTAGLGDHLARKVQSEDLVDDKWKNAYKTPLLDDPVFIHPSSVL 970
Query: 506 DHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 543
+ PE+V+Y E V T++ +++ V+ V +W+ + P Y
Sbjct: 971 FKELPEFVVYQEIVETTKMYMKGVSTVDMQWIPVLLPSY 1009
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 359 (131.4 bits), Expect = 6.3e-61, Sum P(3) = 6.3e-61
Identities = 93/251 (37%), Positives = 138/251 (54%)
Query: 159 PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 218
P+ V+PLYS L P Q ++F+ R VV+TN+AETSLTI GI YV+D G
Sbjct: 374 PLHVLPLYSLLAPEKQAQVFKPPPEGT-------RLCVVATNVAETSLTIPGIKYVVDCG 426
Query: 219 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 278
K++ Y+ V S V+ +S+ASA QR+GRAGRT+PG C+RLY+ F D + P
Sbjct: 427 KVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFG-DFEQFPPP 485
Query: 279 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD---------- 328
EI R + + +L +K L ++ +++F F PP+ E L+ A E+L LGAL
Sbjct: 486 EITRRPVEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQ 545
Query: 329 -DDGNL----TEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 383
+ L T +G M+ FP+ P+ +KML S ++ C ++I A ++V F +
Sbjct: 546 LQENRLSCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF-EELD 604
Query: 384 AQKAADEAKAR 394
A+DE R
Sbjct: 605 RPAASDEELTR 615
Score = 285 (105.4 bits), Expect = 6.3e-61, Sum P(3) = 6.3e-61
Identities = 64/147 (43%), Positives = 92/147 (62%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL-----KNRPDLKL 66
+++TDG+LL+E D LL RYKV+++DEAHER++ TD+L GLL ++ +N P LKL
Sbjct: 133 KFMTDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLP-LKL 191
Query: 67 VVMSATLEAEKF-QG---YFYGAPLMKVPGRLHPVEIFYTQE-PERDYLEAAIRTVVQIH 121
++MSATL E F Q + P++KV R PV + + + P DY R V +IH
Sbjct: 192 LIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIH 251
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITK 148
P+G ILVFLTG+ E+ CR++ K
Sbjct: 252 RMLPAGGILVFLTGQAEVHALCRRLRK 278
Score = 91 (37.1 bits), Expect = 6.3e-61, Sum P(3) = 6.3e-61
Identities = 38/159 (23%), Positives = 67/159 (42%)
Query: 400 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR----IMARFNL---- 451
GD + LL A + + P +C N + ++A+ +R QL + L
Sbjct: 640 GDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRGQLTTAVNAVCPEAELFVDP 699
Query: 452 KLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERT------GQYLTVKDNQVVHLHPSNCL 505
K+ + Y I A L + + E Y T + V +HPS+ L
Sbjct: 700 KMQPPTESQVTYLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVL 759
Query: 506 DHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 543
+ PE+V+Y E V T++ +++ V+ V +W+ + P Y
Sbjct: 760 FKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSY 798
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 355 (130.0 bits), Expect = 8.4e-61, Sum P(3) = 8.4e-61
Identities = 91/235 (38%), Positives = 133/235 (56%)
Query: 159 PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 218
P+ V+PLYS L P Q K+F R VV+TN+AETSLTI GI YV+D G
Sbjct: 576 PLYVLPLYSLLAPEKQAKVFRPPPPGT-------RLCVVATNVAETSLTIPGIKYVVDCG 628
Query: 219 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 278
K++ Y+ V S V+ IS+ASA+QR+GRAGRT+PG C+RLY+ F D + + P
Sbjct: 629 KVKKRFYDKITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFM-DFEKFSAP 687
Query: 279 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD---GNLTE 335
EI + + + +L +K L I+ +++F F PP E L A E+L LGAL + G L E
Sbjct: 688 EITKRPVEDLILQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMTGRLKE 747
Query: 336 ------------MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCF 378
+G M+ FP+ P+ +KML S +++C ++I + ++V F
Sbjct: 748 QQAAKLSCPISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTVRELF 802
Score = 293 (108.2 bits), Expect = 8.4e-61, Sum P(3) = 8.4e-61
Identities = 64/146 (43%), Positives = 91/146 (62%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD----LKLV 67
+++TDG+LL+E D LL +YKVI++DEAHER++ TD+L GLL ++ R LKL+
Sbjct: 336 KFMTDGVLLKEVQKDFLLSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLI 395
Query: 68 VMSATLEAEKFQG---YFYGAP-LMKVPGRLHPVEIFYTQE-PERDYLEAAIRTVVQIHM 122
+MSATL E F F G P +++V R PV + + ++ P DY R V +IH
Sbjct: 396 IMSATLRVEDFTENTRLFAGTPPVLQVDARQFPVTVHFNKKTPLDDYSGECFRKVCKIHR 455
Query: 123 CEPSGDILVFLTGEEEIEDACRKITK 148
PSG ILVFLTG+ E+ CR++ K
Sbjct: 456 MLPSGGILVFLTGQAEVHSLCRRLRK 481
Score = 91 (37.1 bits), Expect = 8.4e-61, Sum P(3) = 8.4e-61
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 488 YLTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 543
Y T + V +HPS+ L + PE+V+Y E V T++ +++ V+ V EW+ + P Y
Sbjct: 944 YKTALLDDPVFIHPSSVLFKQLPEFVVYQEIVETTKLYMKGVSAVEPEWIPALLPPY 1000
Score = 38 (18.4 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 347 PQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLT 404
P+++K VE + L+I +++ P P EA AA+E G + +T
Sbjct: 687 PEITKRPVED--LILQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMT 742
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 464 (168.4 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 135/461 (29%), Positives = 233/461 (50%)
Query: 97 VEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQ 156
+E+ + + + + A IR +V + E G ILVFL G + I + ++ D+
Sbjct: 454 LEMMDDDKVDLNLIAALIRYIV---LEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDR 510
Query: 157 VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVID 216
++PL+S +P Q ++F+ RKIV++TNIAETS+TID +VYVID
Sbjct: 511 F---LIIPLHSLMPTVNQTQVFKKTPPGV-------RKIVIATNIAETSITIDDVVYVID 560
Query: 217 PGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT--EKSFNNDLQP 274
G K+ ++ + + ++ +SKA+A QR GRAGR QPG C+ LY S +D Q
Sbjct: 561 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQ- 619
Query: 275 QTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGN 332
PEILR+ L L +K L + + +F MDPP+ E ++ +++ L L ALD
Sbjct: 620 --LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEAVVLSIKHLMELSALDKQEE 677
Query: 333 LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAK 392
LT +G ++ P++P + KM++ + C + +L+I+A LS + FV P +K AD +
Sbjct: 678 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR 737
Query: 393 ARFG-HIDGDHLTLLNVYHAYKQNNE-----DPSWCYDNFVNHRALKSADNVRQQLVRIM 446
DHLT++N + +++ + +C++ F++ L+ N++ Q +
Sbjct: 738 KELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHL 797
Query: 447 --ARFNLKLCSND----FNSRDYYVNIRKAMLAGYFMQVA----HLERTGQYLTV--KDN 494
A F D NS + + I+ + AG + +VA +L + + + V K +
Sbjct: 798 LGAGFVSSRSPKDPKANINSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSD 856
Query: 495 QVVHLHPSNC----LDHKPEWVIYNEYVLTSRNFIRTVTDV 531
+V +HP + D W+IY+ + TS ++ T+V
Sbjct: 857 GLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEV 897
Score = 195 (73.7 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 40/85 (47%), Positives = 55/85 (64%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G++L+ +D L IVLDE HER L +DVL ++K++L R DLK+++MSAT
Sbjct: 301 YCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSAT 360
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPV 97
L AEKF YF P++ +PG PV
Sbjct: 361 LNAEKFSEYFGNCPMIHIPGFTFPV 385
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 423 (154.0 bits), Expect = 1.1e-60, Sum P(3) = 1.1e-60
Identities = 112/350 (32%), Positives = 178/350 (50%)
Query: 108 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 167
D +E+ + +V P G +LVFL G EI+ ++ + V PL+S
Sbjct: 872 DLVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHS 931
Query: 168 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 227
+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y+
Sbjct: 932 SLSNEEQQAVFTRPQNGVT-------KIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDA 984
Query: 228 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 287
+ESL +S+A+A QR GRAGR G CF L+T F + L Q PEI R L
Sbjct: 985 SRSMESLEDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQ 1044
Query: 288 TVLTLKKLGID-----DLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSE 342
L +K L + D V ++PP +L A + L LGAL D+ +LT +G ++
Sbjct: 1045 LCLRVKVLEVFAERPLDSVFSQLIEPPTEGSLEAAKQRLCALGALTDEESLTPLGWHLAC 1104
Query: 343 FPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDH 402
P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A+E K F + DH
Sbjct: 1105 LPVDVRIGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAFSLANSDH 1164
Query: 403 LTLLNVYHAYKQNNEDP-----SWCYDNFVNHRALKSADNVRQQLVRIMA 447
L L+ Y + + +C +NF++ R L+ +++Q +++
Sbjct: 1165 LALMQAYKGWCNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFAELLS 1214
Score = 202 (76.2 bits), Expect = 1.1e-60, Sum P(3) = 1.1e-60
Identities = 40/92 (43%), Positives = 58/92 (63%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+ T G+LLR DP L +++DE HERT +D L +LK+++ R DLK+++MSAT
Sbjct: 682 FCTTGVLLRRLEGDPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSAT 741
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
L AE F YF P + +PGR PVE F+ ++
Sbjct: 742 LNAELFSQYFNNCPCIHIPGRTFPVEQFFLED 773
Score = 66 (28.3 bits), Expect = 1.1e-60, Sum P(3) = 1.1e-60
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 487 QYLTVKDNQVVHLHPSNC---LDHKPE-WVIYNEYVLTSRNFIR 526
+++T D VH+HPS+ + H +++Y+E V TSR FIR
Sbjct: 1297 RFMTKSDG-AVHIHPSSVNFSVRHYDSPYLVYHEKVKTSRVFIR 1339
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 422 (153.6 bits), Expect = 1.5e-60, Sum P(3) = 1.5e-60
Identities = 112/351 (31%), Positives = 186/351 (52%)
Query: 108 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 167
+ +EA + +V P G ILVFL G EI+ ++ + + PL+S
Sbjct: 829 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHS 888
Query: 168 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 227
+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y+
Sbjct: 889 SLSSEEQQAVFVKPPAGVT-------KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 941
Query: 228 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 287
+ESL + +S+A+A QR GRAGR G CF L+T +N+ L Q PEI R L
Sbjct: 942 SKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQ 1001
Query: 288 TVLTLKKLGI---DDL--VHFDFMDPPAPETLMRALEV-LNYLGALDDDGNLTEMGEKMS 341
L +K L + +L V ++PP ++L RA ++ L LGAL D LT +G ++
Sbjct: 1002 LCLRIKILEMFSAHNLQSVFSRLIEPPHTDSL-RASKIRLRDLGALTPDERLTPLGYHLA 1060
Query: 342 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGD 401
P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A++ K F + D
Sbjct: 1061 SLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSD 1120
Query: 402 HLTLLNVYHAYKQNNEDP-----SWCYDNFVNHRALKSADNVRQQLVRIMA 447
+L LL Y ++ + ++ ++C NF++ R L+ ++++Q +++
Sbjct: 1121 YLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLS 1171
Score = 204 (76.9 bits), Expect = 1.5e-60, Sum P(3) = 1.5e-60
Identities = 39/92 (42%), Positives = 59/92 (64%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR D L+ I++DE HERT +D L +LK+++ RP L++++MSAT
Sbjct: 643 YCTTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSAT 702
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
L AE F YF P++ +PGR PV+ F+ ++
Sbjct: 703 LNAELFSDYFNSCPVITIPGRTFPVDQFFLED 734
Score = 63 (27.2 bits), Expect = 1.5e-60, Sum P(3) = 1.5e-60
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 487 QYLTVKDNQVVHLHPSNC---LDH-KPEWVIYNEYVLTSRNFIR 526
+++T K++ VH+HPS+ + H +++Y+E + TSR FIR
Sbjct: 1253 KFVT-KNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1295
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 448 (162.8 bits), Expect = 1.5e-60, Sum P(2) = 1.5e-60
Identities = 121/402 (30%), Positives = 206/402 (51%)
Query: 97 VEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQ 156
V++ E ++ L + + I + E G ILVFL G + I + ++ D+
Sbjct: 373 VDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDK 432
Query: 157 VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVID 216
++PL+S +P Q ++F+ RKIV++TNIAETS+TID +VYVID
Sbjct: 433 F---LIIPLHSLMPTVNQTQVFKRTPPGV-------RKIVIATNIAETSITIDDVVYVID 482
Query: 217 PGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT--EKSFNNDLQP 274
G K+ ++ + + ++ +SKA+A QR GRAGR QPG C+ LY S +D Q
Sbjct: 483 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQ- 541
Query: 275 QTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGN 332
PEILR+ L L +K L + + +F MDPP+ E ++ ++ L L ALD
Sbjct: 542 --LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEE 599
Query: 333 LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAK 392
LT +G ++ P++P + KM++ + C + +L+I+A LS + FV P +K AD +
Sbjct: 600 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR 659
Query: 393 ARFGH-IDGDHLTLLNVYHAYKQNNE-----DPSWCYDNFVNHRALKSADNVRQQLVRIM 446
DHLT++N + +++ + +C++ F++ L+ N++ Q +
Sbjct: 660 KELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHL 719
Query: 447 --ARF----NLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHL 482
A F N K ++ NS + + I+ + AG + +VA +
Sbjct: 720 LGAGFVSSRNPKDPESNINSDNEKI-IKAVICAGLYPKVAKI 760
Score = 204 (76.9 bits), Expect = 1.5e-60, Sum P(2) = 1.5e-60
Identities = 41/85 (48%), Positives = 56/85 (65%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G++L+ +DP L IVLDE HER L +DVL ++K++L R DLK+++MSAT
Sbjct: 223 YCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSAT 282
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPV 97
L AEKF YF P++ +PG PV
Sbjct: 283 LNAEKFSEYFGNCPMIHIPGFTFPV 307
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 359 (131.4 bits), Expect = 1.7e-60, Sum P(3) = 1.7e-60
Identities = 93/251 (37%), Positives = 138/251 (54%)
Query: 159 PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 218
P+ V+PLYS L P Q ++F+ R VV+TN+AETSLTI GI YV+D G
Sbjct: 587 PLHVLPLYSLLAPEKQAQVFKPPPEGT-------RLCVVATNVAETSLTIPGIKYVVDCG 639
Query: 219 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 278
K++ Y+ V S V+ +S+ASA QR+GRAGRT+PG C+RLY+ F D + P
Sbjct: 640 KVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFG-DFEQFPPP 698
Query: 279 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD---------- 328
EI R + + +L +K L ++ +++F F PP+ E L+ A E+L LGAL
Sbjct: 699 EITRRPVEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQ 758
Query: 329 -DDGNL----TEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 383
+ L T +G M+ FP+ P+ +KML S ++ C ++I A ++V F +
Sbjct: 759 LQENRLSCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF-EELD 817
Query: 384 AQKAADEAKAR 394
A+DE R
Sbjct: 818 RPAASDEELTR 828
Score = 285 (105.4 bits), Expect = 1.7e-60, Sum P(3) = 1.7e-60
Identities = 64/147 (43%), Positives = 92/147 (62%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL-----KNRPDLKL 66
+++TDG+LL+E D LL RYKV+++DEAHER++ TD+L GLL ++ +N P LKL
Sbjct: 346 KFMTDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLP-LKL 404
Query: 67 VVMSATLEAEKF-QG---YFYGAPLMKVPGRLHPVEIFYTQE-PERDYLEAAIRTVVQIH 121
++MSATL E F Q + P++KV R PV + + + P DY R V +IH
Sbjct: 405 LIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIH 464
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITK 148
P+G ILVFLTG+ E+ CR++ K
Sbjct: 465 RMLPAGGILVFLTGQAEVHALCRRLRK 491
Score = 91 (37.1 bits), Expect = 1.7e-60, Sum P(3) = 1.7e-60
Identities = 38/159 (23%), Positives = 67/159 (42%)
Query: 400 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR----IMARFNL---- 451
GD + LL A + + P +C N + ++A+ +R QL + L
Sbjct: 853 GDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRGQLTTAVNAVCPEAELFVDP 912
Query: 452 KLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERT------GQYLTVKDNQVVHLHPSNCL 505
K+ + Y I A L + + E Y T + V +HPS+ L
Sbjct: 913 KMQPPTESQVTYLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVL 972
Query: 506 DHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 543
+ PE+V+Y E V T++ +++ V+ V +W+ + P Y
Sbjct: 973 FKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSY 1011
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 461 (167.3 bits), Expect = 2.2e-60, Sum P(2) = 2.2e-60
Identities = 134/448 (29%), Positives = 227/448 (50%)
Query: 110 LEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTL 169
+ A IR +V + E G ILVFL G + I + ++ D+ ++PL+S +
Sbjct: 468 IAALIRYIV---LEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKF---LIIPLHSLM 521
Query: 170 PPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRV 229
P Q ++F+ RKIV++TNIAETS+TID +VYVID G K+ ++ +
Sbjct: 522 PTVNQTQVFKKTPPGV-------RKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQN 574
Query: 230 RVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT--EKSFNNDLQPQTYPEILRSNLAN 287
+ ++ +SKA+A QR GRAGR QPG C+ LY S +D Q PEILR+ L
Sbjct: 575 NISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQ---LPEILRTPLEE 631
Query: 288 TVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPL 345
L +K L + + +F MDPP+ E ++ +++ L L ALD LT +G ++ P+
Sbjct: 632 LCLQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPV 691
Query: 346 DPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFG-HIDGDHLT 404
+P + KM++ + C + +L+I+A LS + FV P +K AD + DHLT
Sbjct: 692 EPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDHLT 751
Query: 405 LLNVYHAYKQNNE-----DPSWCYDNFVNHRALKSADNVRQQLVRIM--ARFNLKLCSND 457
++N + +++ + +C++ F++ L+ N++ Q + A F D
Sbjct: 752 VVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKD 811
Query: 458 ----FNSRDYYVNIRKAMLAGYFMQVA----HLERTGQYLTV--KDNQVVHLHPSNC--- 504
NS + + I+ + AG + +VA +L + + + V K + +V +HP +
Sbjct: 812 PKANINSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVE 870
Query: 505 -LDHKPEWVIYNEYVLTSRNFIRTVTDV 531
D W+IY+ + TS ++ T+V
Sbjct: 871 QTDFHYNWLIYHLKMRTSSIYLYDCTEV 898
Score = 195 (73.7 bits), Expect = 2.2e-60, Sum P(2) = 2.2e-60
Identities = 40/85 (47%), Positives = 55/85 (64%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G++L+ +D L IVLDE HER L +DVL ++K++L R DLK+++MSAT
Sbjct: 302 YCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSAT 361
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPV 97
L AEKF YF P++ +PG PV
Sbjct: 362 LNAEKFSEYFGNCPMIHIPGFTFPV 386
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 356 (130.4 bits), Expect = 2.7e-60, Sum P(3) = 2.7e-60
Identities = 92/245 (37%), Positives = 135/245 (55%)
Query: 152 NMGDQVG---PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTI 208
N G+Q P+ V+PLYS L P Q ++F+ R V++TN+AETSLTI
Sbjct: 570 NEGEQPDASLPLHVLPLYSLLAPEKQAQVFKPPPEGT-------RLCVIATNVAETSLTI 622
Query: 209 DGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSF 268
GI YV+D G K++ Y+ V S V+ +S+ASA QR+GRAGRT+PG C+RLY+ F
Sbjct: 623 PGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF 682
Query: 269 NNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 328
D + PEI R + + +L +K L I+ +++F F PP+ E L+ A E+L LGAL
Sbjct: 683 G-DFEQFPPPEITRRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQ 741
Query: 329 DDGN---------------LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS 373
+T +G MS FP+ P+ +KML S ++ C ++I A ++
Sbjct: 742 APPKQERMKKLQMSQLSCPITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMT 801
Query: 374 VPNCF 378
V F
Sbjct: 802 VRELF 806
Score = 281 (104.0 bits), Expect = 2.7e-60, Sum P(3) = 2.7e-60
Identities = 63/146 (43%), Positives = 90/146 (61%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL----KNRPDLKLV 67
+++TDG+LL+E D LL +YKV+++DEAHER++ TD+L GLL ++ K LKL+
Sbjct: 342 KFMTDGVLLKEIQKDFLLLKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLL 401
Query: 68 VMSATLEAEKF---QGYFYGAP-LMKVPGRLHPVEIFYTQE-PERDYLEAAIRTVVQIHM 122
+MSATL E F Q F P ++KV R PV + + + P DY R V +IH
Sbjct: 402 IMSATLRVEDFTQNQRLFTTPPPVIKVESRQFPVTVHFNKRTPLDDYSGECFRKVCKIHR 461
Query: 123 CEPSGDILVFLTGEEEIEDACRKITK 148
P+G ILVFLTG+ E+ CR++ K
Sbjct: 462 MLPAGGILVFLTGQAEVHALCRRLRK 487
Score = 97 (39.2 bits), Expect = 2.7e-60, Sum P(3) = 2.7e-60
Identities = 39/159 (24%), Positives = 69/159 (43%)
Query: 400 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR----IMARFNLKLCS 455
GD + LL A + P +C N + ++A+ +R QL + L L
Sbjct: 846 GDLMVLLGAVGACEYAGCSPQFCQANGLRYKAMLEIRRLRGQLTTAVNAVCPEAGLFLDP 905
Query: 456 NDFNSRDYYVN-IRKAMLAGYFMQVAHLERT---------GQYLTVKDNQVVHLHPSNCL 505
+ V +R+ M AG +A ++ Y T + V +HPS+ L
Sbjct: 906 KMQPPTESQVTYLRQIMAAGLGDHLARRVQSEDLLDPKWKNAYKTPLLDDPVFIHPSSVL 965
Query: 506 DHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 543
+ PE+V+Y E V T++ +++ V+ V +W+ + P Y
Sbjct: 966 FRELPEFVVYQEIVETTKMYMKGVSTVEIQWIPSLLPSY 1004
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 421 (153.3 bits), Expect = 3.0e-60, Sum P(3) = 3.0e-60
Identities = 114/351 (32%), Positives = 186/351 (52%)
Query: 108 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 167
+ +EA + +V P G ILVFL G EI+ ++ + V PL+S
Sbjct: 825 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHS 884
Query: 168 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 227
+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y+
Sbjct: 885 SLSSEEQQAVFVKPPVGVT-------KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 937
Query: 228 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 287
+ESL + +S+A+A QR GRAGR G CF L+T FN+ L Q PEI R L
Sbjct: 938 SKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQ 997
Query: 288 TVLTLKKLGI---DDL--VHFDFMDPPAPETLMRALEV-LNYLGALDDDGNLTEMGEKMS 341
L +K L + +L V ++PP ++L RA ++ L LGAL D LT +G ++
Sbjct: 998 LCLRIKILEMFSTHNLQSVFSRLIEPPHTDSL-RASKIRLRDLGALTPDEKLTPLGYHLA 1056
Query: 342 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGD 401
P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A++ K F + D
Sbjct: 1057 SLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSD 1116
Query: 402 HLTLLNVYHAYKQNNEDP-----SWCYDNFVNHRALKSADNVRQQLVRIMA 447
+L LL Y ++ + ++ ++C NF++ R L+ ++++Q +++
Sbjct: 1117 YLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLS 1167
Score = 201 (75.8 bits), Expect = 3.0e-60, Sum P(3) = 3.0e-60
Identities = 39/92 (42%), Positives = 60/92 (65%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR D L+ I++DE HERT +D L +LK+++ RP+L++++MSAT
Sbjct: 639 YCTTGVLLRRLEGDTSLQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPNLQVILMSAT 698
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
L AE F YF P++ +PGR PV+ F+ ++
Sbjct: 699 LNAELFSEYFSSCPVITIPGRTFPVDQFFLED 730
Score = 64 (27.6 bits), Expect = 3.0e-60, Sum P(3) = 3.0e-60
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 487 QYLTVKDNQVVHLHPSNC---LDH-KPEWVIYNEYVLTSRNFIR 526
+++T K++ VH+HPS+ + H +++Y+E + TSR FIR
Sbjct: 1249 KFVT-KNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIR 1291
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 417 (151.9 bits), Expect = 4.8e-60, Sum P(3) = 4.8e-60
Identities = 111/361 (30%), Positives = 191/361 (52%)
Query: 109 YLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYST 168
YLE R+ Q E G +L+FL G I+ ++ + ++ KV+ L+S
Sbjct: 853 YLEIPDRSP-QFRNIE--GAVLIFLPGLAHIQQLYDLLSTDRRFFSERY---KVIALHSI 906
Query: 169 LPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPR 228
L Q F RKIV++TNIAET +TI +V+VID G K+ Y+
Sbjct: 907 LSTQDQAAAF-------TLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 229 VRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANT 288
++ SL+ + +SKASA QR GRAGR + G CFR+YT + F + + PEILR L
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEEL 1018
Query: 289 VLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPL 345
L + K + F +DPP + + A+ +L +GA + ++ LT +G+ ++ P+
Sbjct: 1019 CLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPV 1078
Query: 346 DPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTL 405
+ ++ KML+ + C + + +++A+++ + F P + AD AK+ D DHLT+
Sbjct: 1079 NVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTI 1138
Query: 406 LNVYHAYKQNNEDP------SWCYDNFVNHRALKSADNVRQQLVRIM--ARFNLKLCSND 457
N Y +K+ ++ ++C NF+N +L + ++V+Q+L++++ A F+ SND
Sbjct: 1139 YNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTSND 1198
Query: 458 F 458
+
Sbjct: 1199 W 1199
Score = 225 (84.3 bits), Expect = 4.8e-60, Sum P(3) = 4.8e-60
Identities = 40/92 (43%), Positives = 65/92 (70%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT
Sbjct: 674 YCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSAT 733
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
+++EKF YF P++++ GR +PVE+F+ ++
Sbjct: 734 VDSEKFSTYFTHCPILRISGRSYPVEVFHLED 765
Score = 42 (19.8 bits), Expect = 4.8e-60, Sum P(3) = 4.8e-60
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 499 LHPSNC-LDHKPE-WVIYNEYVLTSRNFIRTVT 529
+HPS+ D + W++Y E V +R ++R T
Sbjct: 1256 VHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETT 1288
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 448 (162.8 bits), Expect = 6.7e-60, Sum P(2) = 6.7e-60
Identities = 121/402 (30%), Positives = 206/402 (51%)
Query: 97 VEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQ 156
V++ E ++ L + + I + E G ILVFL G + I + ++ D+
Sbjct: 459 VDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDK 518
Query: 157 VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVID 216
++PL+S +P Q ++F+ RKIV++TNIAETS+TID +VYVID
Sbjct: 519 F---LIIPLHSLMPTVNQTQVFKRTPPGV-------RKIVIATNIAETSITIDDVVYVID 568
Query: 217 PGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT--EKSFNNDLQP 274
G K+ ++ + + ++ +SKA+A QR GRAGR QPG C+ LY S +D Q
Sbjct: 569 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQ- 627
Query: 275 QTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGN 332
PEILR+ L L +K L + + +F MDPP+ E ++ ++ L L ALD
Sbjct: 628 --LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEE 685
Query: 333 LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAK 392
LT +G ++ P++P + KM++ + C + +L+I+A LS + FV P +K AD +
Sbjct: 686 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR 745
Query: 393 ARFGH-IDGDHLTLLNVYHAYKQNNE-----DPSWCYDNFVNHRALKSADNVRQQLVRIM 446
DHLT++N + +++ + +C++ F++ L+ N++ Q +
Sbjct: 746 KELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHL 805
Query: 447 --ARF----NLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHL 482
A F N K ++ NS + + I+ + AG + +VA +
Sbjct: 806 LGAGFVSSRNPKDPESNINSDNEKI-IKAVICAGLYPKVAKI 846
Score = 204 (76.9 bits), Expect = 6.7e-60, Sum P(2) = 6.7e-60
Identities = 41/85 (48%), Positives = 56/85 (65%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G++L+ +DP L IVLDE HER L +DVL ++K++L R DLK+++MSAT
Sbjct: 309 YCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSAT 368
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPV 97
L AEKF YF P++ +PG PV
Sbjct: 369 LNAEKFSEYFGNCPMIHIPGFTFPV 393
Score = 64 (27.6 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 30/130 (23%), Positives = 62/130 (47%)
Query: 418 DPSWCYDNFVNHRALKSADNVRQQLVRIM--ARF----NLKLCSNDFNSRDYYVNIRKAM 471
+ +C++ F++ L+ N++ Q + A F N K ++ NS + + I+ +
Sbjct: 777 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKI-IKAVI 835
Query: 472 LAGYFMQVA----HLERTGQYLTV--KDNQVVHLHPSNC----LDHKPEWVIYNEYVLTS 521
AG + +VA +L + + + V K + +V +HP + D W+IY+ + TS
Sbjct: 836 CAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTS 895
Query: 522 RNFIRTVTDV 531
++ T+V
Sbjct: 896 SIYLYDCTEV 905
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 415 (151.1 bits), Expect = 7.8e-60, Sum P(3) = 7.8e-60
Identities = 105/343 (30%), Positives = 184/343 (53%)
Query: 127 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXX 186
G +L+FL G I+ ++ + ++ KV+ L+S L Q F
Sbjct: 865 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERY---KVIALHSILSTQDQAAAF-------T 914
Query: 187 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 246
RKIV++TNIAET +TI +V+VID G K+ Y+ ++ SL+ + +SKASA Q
Sbjct: 915 LPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQ 974
Query: 247 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--D 304
R GRAGR + G CFR+YT + F + + PEILR L L + K + F
Sbjct: 975 RQGRAGRVRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEELCLHIMKCNLGSPEDFLSK 1033
Query: 305 FMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 363
+DPP + + A+ +L +GA + ++ LT +G+ ++ P++ ++ KML+ + C +
Sbjct: 1034 ALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLD 1093
Query: 364 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP---- 419
+ +++A+++ + F P + AD AK+ D DHLT+ N Y +K+ ++
Sbjct: 1094 PVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRS 1153
Query: 420 --SWCYDNFVNHRALKSADNVRQQLVRIM--ARFNLKLCSNDF 458
++C NF+N +L + ++V+Q+L++++ A F+ SND+
Sbjct: 1154 EIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTSNDW 1196
Score = 225 (84.3 bits), Expect = 7.8e-60, Sum P(3) = 7.8e-60
Identities = 40/92 (43%), Positives = 65/92 (70%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT
Sbjct: 674 YCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSAT 733
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
+++EKF YF P++++ GR +PVE+F+ ++
Sbjct: 734 VDSEKFSTYFTHCPILRISGRSYPVEVFHLED 765
Score = 42 (19.8 bits), Expect = 7.8e-60, Sum P(3) = 7.8e-60
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 499 LHPSNC-LDHKPE-WVIYNEYVLTSRNFIRTVT 529
+HPS+ D + W++Y E V +R ++R T
Sbjct: 1253 VHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETT 1285
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 355 (130.0 bits), Expect = 9.5e-60, Sum P(3) = 9.5e-60
Identities = 92/247 (37%), Positives = 137/247 (55%)
Query: 159 PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 218
P+ V+PLYS L P Q ++F+ R VV+TN+AETSLTI GI YV+D G
Sbjct: 581 PLHVLPLYSLLAPEKQAQVFQPPPEGT-------RLCVVATNVAETSLTIPGIKYVVDCG 633
Query: 219 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 278
K++ Y+ V S V+ +S+ASA QR+GRAGRT+PG C+RLY+ F+ D + P
Sbjct: 634 KVKKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFS-DFEQFPPP 692
Query: 279 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGN------ 332
EI R + + +L +K L I+ +++F F PP+ E L+ A E+L LGAL
Sbjct: 693 EITRRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPQKTESVKQ 752
Query: 333 ---------LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 383
+T +G M+ FP+ P+ +KML S ++ C ++I A ++V F +
Sbjct: 753 LQRSWLGCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTVRELF-EELD 811
Query: 384 AQKAADE 390
A+DE
Sbjct: 812 RPAASDE 818
Score = 282 (104.3 bits), Expect = 9.5e-60, Sum P(3) = 9.5e-60
Identities = 63/146 (43%), Positives = 90/146 (61%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL----KNRPDLKLV 67
+++TDG+LL+E D LL RYKV+++DEAHER++ TD+L GLL ++ K LKL+
Sbjct: 340 KFMTDGVLLKEIQKDFLLLRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLL 399
Query: 68 VMSATLEAEKF---QGYF-YGAPLMKVPGRLHPVEIFYTQE-PERDYLEAAIRTVVQIHM 122
+MSATL E F Q F P++KV R PV + + + P DY R V +IH
Sbjct: 400 IMSATLRVEDFTQNQRLFPQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHR 459
Query: 123 CEPSGDILVFLTGEEEIEDACRKITK 148
P+G ILVFLTG+ E+ CR++ +
Sbjct: 460 MLPAGGILVFLTGQAEVHALCRRLRR 485
Score = 92 (37.4 bits), Expect = 9.5e-60, Sum P(3) = 9.5e-60
Identities = 36/159 (22%), Positives = 69/159 (43%)
Query: 400 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR----IMARFNLKLCS 455
GD + LL A + + P +C N + ++A+ +R QL + L +
Sbjct: 847 GDIMVLLGAVGACEYSGRSPQFCEANGLRYKAMMEIRRLRGQLTTAVNTVCPEAGLFMDP 906
Query: 456 N-DFNSRDYYVNIRKAMLAGYFMQVAHLERT---------GQYLTVKDNQVVHLHPSNCL 505
S +R+ + AG +A ++ Y T + V +HPS+ L
Sbjct: 907 KMQPPSESQVTYLRQIVAAGLGDHLARRVQSEDLLDDKWKNAYKTPLLDDPVFIHPSSVL 966
Query: 506 DHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 543
+ PE+V+Y E + T++ +++ V+ V +W+ + P Y
Sbjct: 967 FKELPEFVVYQEIMETTKMYMKGVSAVEVQWIPVLLPSY 1005
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 417 (151.9 bits), Expect = 9.8e-60, Sum P(3) = 9.8e-60
Identities = 105/343 (30%), Positives = 183/343 (53%)
Query: 127 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXX 186
G +L+FL G I+ ++ + ++ KV+ L+S L Q F
Sbjct: 865 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERY---KVIALHSILSTQDQAAAF-------T 914
Query: 187 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 246
RKIV++TNIAET +TI +V+VID G K+ Y+ ++ SL+ + +SKASA Q
Sbjct: 915 LPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQ 974
Query: 247 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--D 304
R GRAGR + G CFR+YT + F + + PEILR L L + K + F
Sbjct: 975 RQGRAGRVRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEELCLHIMKCNLGSPEDFLSK 1033
Query: 305 FMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 363
+DPP + + A+ +L +GA + ++ LT +G+ ++ P++ ++ KML+ + C +
Sbjct: 1034 ALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLD 1093
Query: 364 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP---- 419
+ +++A+++ + F+ P + AD AK+ D DHLT+ N Y +K+ ++
Sbjct: 1094 PVATLAAVMTEKSPFITPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRS 1153
Query: 420 --SWCYDNFVNHRALKSADNVRQQLVRIM--ARFNLKLCSNDF 458
++C NF+N +L + ++V+Q+L++++ A F SN F
Sbjct: 1154 EIAYCRKNFLNRTSLLTLEDVKQELIKLVKAAGFLSSTTSNSF 1196
Score = 224 (83.9 bits), Expect = 9.8e-60, Sum P(3) = 9.8e-60
Identities = 40/92 (43%), Positives = 64/92 (69%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT
Sbjct: 674 YCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSAT 733
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
++ EKF YF P++++ GR +PVE+F+ ++
Sbjct: 734 VDCEKFSTYFTHCPILRISGRSYPVEVFHLED 765
Score = 40 (19.1 bits), Expect = 9.8e-60, Sum P(3) = 9.8e-60
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 511 WVIYNEYVLTSRNFIRTVT 529
W++Y E + +R ++R T
Sbjct: 1267 WLLYQEKIRYARVYLRETT 1285
Score = 40 (19.1 bits), Expect = 1.6e-40, Sum P(3) = 1.6e-40
Identities = 13/59 (22%), Positives = 29/59 (49%)
Query: 63 DLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
DL L +++ + +F+ GA L+ +PG H +++ +R + + V+ +H
Sbjct: 845 DLILELLTYLDRSPQFKNV-EGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK-VIALH 901
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 417 (151.9 bits), Expect = 1.2e-59, Sum P(3) = 1.2e-59
Identities = 91/263 (34%), Positives = 155/263 (58%)
Query: 193 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 252
RKIV++TNIAET +TI +V+VID G K+ Y+ ++ SL+ + +SKASA QR GRAG
Sbjct: 924 RKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAG 983
Query: 253 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPA 310
R + G CFRLYT + F L+ + PEILR L L + K + F +DPP
Sbjct: 984 RVRDGFCFRLYTRERFEGFLE-YSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQ 1042
Query: 311 PETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 369
P+ + A+ +L +GA + + LT +G+ ++ P++ ++ KML+ + C + +++
Sbjct: 1043 PQVISNAMNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLA 1102
Query: 370 AMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP------SWCY 423
A+++ + F+ P + AD AK+ D DHLT+ N Y +K+ ++ S+C
Sbjct: 1103 AVMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQ 1162
Query: 424 DNFVNHRALKSADNVRQQLVRIM 446
NF+N +L + ++V+Q+L++++
Sbjct: 1163 RNFLNRTSLLTLEDVKQELMKLV 1185
Score = 221 (82.9 bits), Expect = 1.2e-59, Sum P(3) = 1.2e-59
Identities = 39/92 (42%), Positives = 65/92 (70%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT
Sbjct: 677 YCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSAT 736
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
++++KF YF P++++ GR +PVE+F+ ++
Sbjct: 737 VDSDKFSTYFTHCPILRISGRSYPVEVFHLED 768
Score = 42 (19.8 bits), Expect = 1.2e-59, Sum P(3) = 1.2e-59
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 499 LHPSNC-LDHKPE-WVIYNEYVLTSRNFIRTVT 529
+HPS+ D + W++Y E V +R ++R T
Sbjct: 1253 VHPSSVNRDLQTYGWLLYQEKVRYARVYLRETT 1285
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 416 (151.5 bits), Expect = 1.3e-59, Sum P(3) = 1.3e-59
Identities = 114/353 (32%), Positives = 187/353 (52%)
Query: 108 DYLEAAIRTVVQ-IHMCEPS-GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPL 165
+ +EA + +V H P G ILVFL G EI+ ++ + + PL
Sbjct: 822 ELIEALLEWIVDGKHSYPPDPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPL 881
Query: 166 YSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 225
+S+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y
Sbjct: 882 HSSLSSEEQQAVFVKPPMGVT-------KIIISTNIAETSITIDDVVYVIDSGKMKEKRY 934
Query: 226 NPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 285
+ +ESL + +S+A+A QR GRAGR G CF L+T FN+ L Q PEI R L
Sbjct: 935 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPL 994
Query: 286 ANTVLTLKKLGI---DDL--VHFDFMDPPAPETLMRALEV-LNYLGALDDDGNLTEMGEK 339
L +K L + +L V ++PP ++L RA ++ L LGAL D LT +G
Sbjct: 995 EQLCLRIKILEMFSTHNLQSVFARLIEPPHADSL-RASKIRLRDLGALTPDETLTPLGYH 1053
Query: 340 MSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHID 399
++ P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A++ K F +
Sbjct: 1054 LASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFAN 1113
Query: 400 GDHLTLLNVYHAYKQNNEDP-----SWCYDNFVNHRALKSADNVRQQLVRIMA 447
D+L LL Y ++ + ++ ++C NF++ R L+ ++++Q +++
Sbjct: 1114 SDYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLS 1166
Score = 200 (75.5 bits), Expect = 1.3e-59, Sum P(3) = 1.3e-59
Identities = 39/92 (42%), Positives = 59/92 (64%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR D L+ I++DE HERT +D L +LK+++ RP L++++MSAT
Sbjct: 636 YCTTGVLLRRLEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSAT 695
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
L AE F YF P++ +PGR PV+ F+ ++
Sbjct: 696 LNAELFSEYFNSCPVITIPGRTFPVDQFFLED 727
Score = 64 (27.6 bits), Expect = 1.3e-59, Sum P(3) = 1.3e-59
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 487 QYLTVKDNQVVHLHPSNC---LDH-KPEWVIYNEYVLTSRNFIR 526
+++T K++ VH+HPS+ + H +++Y+E + TSR FIR
Sbjct: 1249 KFVT-KNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIR 1291
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 444 (161.4 bits), Expect = 3.8e-59, Sum P(2) = 3.8e-59
Identities = 122/402 (30%), Positives = 208/402 (51%)
Query: 97 VEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQ 156
+E+ + + + + A IR +V + E G ILVFL G + I + ++ D+
Sbjct: 576 MEMIDDDKVDLNLIAALIRHIV---LEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDR 632
Query: 157 VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVID 216
++PL+S +P Q ++F+ RKIV++TNIAETS+TID +VYVID
Sbjct: 633 F---LIIPLHSLMPTVNQTQVFKKTPPGV-------RKIVIATNIAETSITIDDVVYVID 682
Query: 217 PGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT--EKSFNNDLQP 274
G K+ ++ + + ++ +SKA+A QR GRAGR QPG C+ LY S +D Q
Sbjct: 683 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQ- 741
Query: 275 QTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGN 332
PEILR+ L L +K L + + +F MDPP+ E + +++ L L ALD
Sbjct: 742 --LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEE 799
Query: 333 LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAK 392
LT +G ++ P++P + KM++ + C + +L+I+A LS + FV P +K AD +
Sbjct: 800 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR 859
Query: 393 ARFGH-IDGDHLTLLNVYHAYKQNNE-----DPSWCYDNFVNHRALKSADNVRQQLVRIM 446
DHLT++N + +++ + +C++ F++ L+ N++ Q +
Sbjct: 860 KELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHL 919
Query: 447 --ARF----NLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHL 482
A F N K ++ NS + + I+ + AG + +VA +
Sbjct: 920 LGAGFVSSRNPKDPKSNINSDNEKI-IKAVICAGLYPKVAKI 960
Score = 203 (76.5 bits), Expect = 3.8e-59, Sum P(2) = 3.8e-59
Identities = 41/85 (48%), Positives = 56/85 (65%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G++L+ +D L IVLDE HER L +DVL ++K++L RPDLK+++MSAT
Sbjct: 423 YCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSAT 482
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPV 97
L AEKF YF P++ +PG PV
Sbjct: 483 LNAEKFSEYFGNCPMIHIPGFTFPV 507
Score = 64 (27.6 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 30/130 (23%), Positives = 63/130 (48%)
Query: 418 DPSWCYDNFVNHRALKSADNVRQQLVRIM--ARF----NLKLCSNDFNSRDYYVNIRKAM 471
+ +C++ F++ L+ N++ Q + A F N K ++ NS + + I+ +
Sbjct: 891 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKI-IKAVI 949
Query: 472 LAGYFMQVA----HLERTGQYLTV--KDNQVVHLHPSNCLDHKPE----WVIYNEYVLTS 521
AG + +VA +L + + + V K + +V +HP + + E W+IY+ + TS
Sbjct: 950 CAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTS 1009
Query: 522 RNFIRTVTDV 531
++ T+V
Sbjct: 1010 SIYLYDCTEV 1019
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 406 (148.0 bits), Expect = 4.4e-59, Sum P(3) = 4.4e-59
Identities = 100/329 (30%), Positives = 177/329 (53%)
Query: 127 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXX 186
G +L+FL G I+ ++ + ++ KV+ L+S L Q F
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSNDRRFYSERY---KVIALHSILSTQDQAAAF-------T 917
Query: 187 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 246
RKIV++TNIAET +TI +V+VID G K+ Y+ ++ SL+ + +SKASA Q
Sbjct: 918 LPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQ 977
Query: 247 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--D 304
R GRAGR + G CFR+YT + F + + PEILR L L + K + F
Sbjct: 978 RQGRAGRVRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEELCLHIMKCNLGSPEDFLSK 1036
Query: 305 FMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 363
+DPP + + A+ +L +GA + ++ LT +G+ ++ P++ ++ KML+ + C +
Sbjct: 1037 ALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLD 1096
Query: 364 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP---- 419
+ +++A+++ + F P + AD AK+ D DHLT+ N Y +K+ ++
Sbjct: 1097 PVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRS 1156
Query: 420 --SWCYDNFVNHRALKSADNVRQQLVRIM 446
++C NF+N +L + ++V+Q+L++++
Sbjct: 1157 EITYCRRNFLNRTSLLTLEDVKQELIKLV 1185
Score = 226 (84.6 bits), Expect = 4.4e-59, Sum P(3) = 4.4e-59
Identities = 40/92 (43%), Positives = 65/92 (70%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT
Sbjct: 677 YCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSAT 736
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
+++EKF YF P++++ GR +PVE+F+ ++
Sbjct: 737 VDSEKFSTYFTHCPILRISGRSYPVEVFHLED 768
Score = 43 (20.2 bits), Expect = 4.4e-59, Sum P(3) = 4.4e-59
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 499 LHPSNC-LDHKPE-WVIYNEYVLTSRNFIRTVT 529
+HPS+ D + W++Y E + +R ++R T
Sbjct: 1256 VHPSSVNRDLQTHGWLLYQEKIRYARVYLRETT 1288
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 434 (157.8 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 126/398 (31%), Positives = 203/398 (51%)
Query: 62 PDLKLVVMSATLEAEKFQGYF-YGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQ- 119
P K+ TL AE +Q Y Y P K + P+ I PE +E+ ++ +V+
Sbjct: 693 PGKKIKDEKLTL-AETYQRYAEYSKPTCKSIYLMEPMTI----NPE--LIESVLKYIVEG 745
Query: 120 IHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFE 179
H G IL+FL G EI+ + + G +VPL+S L Q +F+
Sbjct: 746 SHDWPREGTILIFLPGFGEIQSVHDSLLDNAL-FSPRAGKFILVPLHSALSGEDQALVFK 804
Query: 180 XXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPI 239
RKIV+STNIAETS+TID V+V+D G K+K ++ +ESL + +
Sbjct: 805 KAPPGK-------RKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWV 857
Query: 240 SKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGI-- 297
S+A+A QR GRAGR PG C LYT + + Q PEI R L VL +K L
Sbjct: 858 SRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFA 917
Query: 298 --DDL-VHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLV 354
+ L V + ++ P ++++ AL L +GALD + LT +G ++ P+D ++ K+++
Sbjct: 918 SRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLML 977
Query: 355 ESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAY-- 412
+ C + +L+I+A LS + FV P + AD+ K F + DHLT+LN Y +
Sbjct: 978 YGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLD 1037
Query: 413 --KQNNEDPSWCY--DNFVNHRALKSADNVRQQLVRIM 446
++ N S Y ++F++ L++ +++ Q + ++
Sbjct: 1038 VARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELL 1075
Score = 211 (79.3 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 40/92 (43%), Positives = 61/92 (66%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+ T G+LLR +DPLL +++DE HER+ +D L +LK +L+ R DLK+++MSAT
Sbjct: 559 FCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSAT 618
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
L A F YF GAP++ +PGR PV+ + ++
Sbjct: 619 LNAALFSDYFGGAPVLDIPGRTFPVQQLFLED 650
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 408 (148.7 bits), Expect = 1.1e-58, Sum P(3) = 1.1e-58
Identities = 102/329 (31%), Positives = 177/329 (53%)
Query: 127 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXX 186
G +L+FL G I+ ++ + ++ +V+ L+S L Q F
Sbjct: 867 GAVLIFLPGLAHIQQLYDLLSSDRRFYSERY---QVIALHSVLSTQDQAAAF-------M 916
Query: 187 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 246
RKIV++TNIAET +TI +V+VID G K+ Y+ ++ SL+ + +SKASA Q
Sbjct: 917 FPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQ 976
Query: 247 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--D 304
R GRAGR + G CFRLYT + F L + PEILR L L + K + F
Sbjct: 977 RQGRAGRVRDGFCFRLYTRERFEGFLD-YSVPEILRVPLEELCLHIMKCDLGSPEDFLSK 1035
Query: 305 FMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 363
+DPP + + A+ +L +GA + ++ LT +G+ ++ P++ ++ KML+ + C
Sbjct: 1036 ALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLE 1095
Query: 364 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP---- 419
+ +++A+++ + F+ P + AD AK+ D DHLT+ N Y +K+ ++
Sbjct: 1096 PVATLAAVMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRS 1155
Query: 420 --SWCYDNFVNHRALKSADNVRQQLVRIM 446
S+C NF+N +L + ++V+Q+L++++
Sbjct: 1156 EISYCQRNFLNRTSLLTLEDVKQELMKLV 1184
Score = 221 (82.9 bits), Expect = 1.1e-58, Sum P(3) = 1.1e-58
Identities = 39/92 (42%), Positives = 65/92 (70%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT
Sbjct: 676 YCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSAT 735
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
++++KF YF P++++ GR +PVE+F+ ++
Sbjct: 736 VDSDKFSTYFTHCPILRISGRSYPVEVFHLED 767
Score = 42 (19.8 bits), Expect = 1.1e-58, Sum P(3) = 1.1e-58
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 499 LHPSNC-LDHKPE-WVIYNEYVLTSRNFIRTVT 529
+HPS+ D + W++Y E V +R ++R T
Sbjct: 1252 VHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETT 1284
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 403 (146.9 bits), Expect = 3.3e-58, Sum P(3) = 3.3e-58
Identities = 101/306 (33%), Positives = 167/306 (54%)
Query: 193 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 252
RKIV++TNIAETS+TID +VYVID G K+ ++ + + ++ +SKA+A QR GRAG
Sbjct: 525 RKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAG 584
Query: 253 RTQPGKCFRLYT--EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDP 308
R QPG C+ LY S +D Q PEILR+ L L +K L + + +F MDP
Sbjct: 585 RVQPGHCYHLYNGLRASLLDDYQ---LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDP 641
Query: 309 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 368
P+ E + +++ L L ALD LT +G ++ P++P + KM++ + C + +L+I
Sbjct: 642 PSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTI 701
Query: 369 SAMLSVPNCFVRPREAQKAADEAKARFGH-IDGDHLTLLNVYHAYKQNNE-----DPSWC 422
+A LS + FV P +K AD + DHLT++N + +++ + +C
Sbjct: 702 AASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKDYC 761
Query: 423 YDNFVNHRALKSADNVRQQLVRIM--ARF----NLKLCSNDFNSRDYYVNIRKAMLAGYF 476
++ F++ L+ N++ Q + A F N K ++ NS + + I+ + AG +
Sbjct: 762 WEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKI-IKAVICAGLY 820
Query: 477 MQVAHL 482
+VA +
Sbjct: 821 PKVAKI 826
Score = 203 (76.5 bits), Expect = 3.3e-58, Sum P(3) = 3.3e-58
Identities = 41/85 (48%), Positives = 56/85 (65%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G++L+ +D L IVLDE HER L +DVL ++K++L RPDLK+++MSAT
Sbjct: 303 YCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSAT 362
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPV 97
L AEKF YF P++ +PG PV
Sbjct: 363 LNAEKFSEYFGNCPMIHIPGFTFPV 387
Score = 64 (27.6 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 30/130 (23%), Positives = 63/130 (48%)
Query: 418 DPSWCYDNFVNHRALKSADNVRQQLVRIM--ARF----NLKLCSNDFNSRDYYVNIRKAM 471
+ +C++ F++ L+ N++ Q + A F N K ++ NS + + I+ +
Sbjct: 757 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKI-IKAVI 815
Query: 472 LAGYFMQVA----HLERTGQYLTV--KDNQVVHLHPSNCLDHKPE----WVIYNEYVLTS 521
AG + +VA +L + + + V K + +V +HP + + E W+IY+ + TS
Sbjct: 816 CAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTS 875
Query: 522 RNFIRTVTDV 531
++ T+V
Sbjct: 876 SIYLYDCTEV 885
Score = 53 (23.7 bits), Expect = 3.3e-58, Sum P(3) = 3.3e-58
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 97 VEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQ 156
+E+ + + + + A IR +V + E G ILVFL G + I + ++ D
Sbjct: 456 MEMIDDDKVDLNLIAALIRHIV---LEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDT 512
Query: 157 VGPV-KVVP 164
+G V K P
Sbjct: 513 IGQVFKKTP 521
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 416 (151.5 bits), Expect = 5.3e-58, Sum P(3) = 5.3e-58
Identities = 113/351 (32%), Positives = 186/351 (52%)
Query: 108 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 167
+ +EA + +V P G ILVFL G EI+ ++ + + PL+S
Sbjct: 781 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 840
Query: 168 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 227
+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y+
Sbjct: 841 SLSSEEQQAVFVKPPLGVT-------KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 893
Query: 228 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 287
+ESL + +S+A+A QR GRAGR G CF L+T +N+ L Q PEI R L
Sbjct: 894 GKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQ 953
Query: 288 TVLTLKKLGI---DDL--VHFDFMDPPAPETLMRALEV-LNYLGALDDDGNLTEMGEKMS 341
L +K L + +L V ++PP ++L RA +V L LGAL D LT +G ++
Sbjct: 954 LCLRIKILEMFSTHNLQSVFSRLIEPPHVDSL-RASKVRLRDLGALTPDEKLTPLGYHLA 1012
Query: 342 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGD 401
P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A++ K F + D
Sbjct: 1013 SLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSD 1072
Query: 402 HLTLLNVYHAYKQNNEDPS-----WCYDNFVNHRALKSADNVRQQLVRIMA 447
+L LL Y ++ + ++ + +C NF++ R L+ ++++Q +++
Sbjct: 1073 YLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLS 1123
Score = 185 (70.2 bits), Expect = 5.3e-58, Sum P(3) = 5.3e-58
Identities = 37/92 (40%), Positives = 58/92 (63%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR D L+ I++DE HERT +D L +LK+++ R L++++MSAT
Sbjct: 594 YCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 653
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
L+A F YF P++ +PGR PV+ F+ ++
Sbjct: 654 LDAGLFSKYFSYCPVITIPGRAFPVDQFFLED 685
Score = 63 (27.2 bits), Expect = 5.3e-58, Sum P(3) = 5.3e-58
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 487 QYLTVKDNQVVHLHPSNC---LDH-KPEWVIYNEYVLTSRNFIR 526
+++T K++ VH+HPS+ + H +++Y+E + TSR FIR
Sbjct: 1205 KFVT-KNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1247
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 416 (151.5 bits), Expect = 6.5e-58, Sum P(3) = 6.5e-58
Identities = 113/351 (32%), Positives = 186/351 (52%)
Query: 108 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 167
+ +EA + +V P G ILVFL G EI+ ++ + + PL+S
Sbjct: 834 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 893
Query: 168 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 227
+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y+
Sbjct: 894 SLSSEEQQAVFVKPPLGVT-------KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 946
Query: 228 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 287
+ESL + +S+A+A QR GRAGR G CF L+T +N+ L Q PEI R L
Sbjct: 947 GKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQ 1006
Query: 288 TVLTLKKLGI---DDL--VHFDFMDPPAPETLMRALEV-LNYLGALDDDGNLTEMGEKMS 341
L +K L + +L V ++PP ++L RA +V L LGAL D LT +G ++
Sbjct: 1007 LCLRIKILEMFSTHNLQSVFSRLIEPPHVDSL-RASKVRLRDLGALTPDEKLTPLGYHLA 1065
Query: 342 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGD 401
P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A++ K F + D
Sbjct: 1066 SLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSD 1125
Query: 402 HLTLLNVYHAYKQNNEDPS-----WCYDNFVNHRALKSADNVRQQLVRIMA 447
+L LL Y ++ + ++ + +C NF++ R L+ ++++Q +++
Sbjct: 1126 YLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLS 1176
Score = 185 (70.2 bits), Expect = 6.5e-58, Sum P(3) = 6.5e-58
Identities = 37/92 (40%), Positives = 58/92 (63%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR D L+ I++DE HERT +D L +LK+++ R L++++MSAT
Sbjct: 647 YCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 706
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
L+A F YF P++ +PGR PV+ F+ ++
Sbjct: 707 LDAGLFSKYFSYCPVITIPGRAFPVDQFFLED 738
Score = 63 (27.2 bits), Expect = 6.5e-58, Sum P(3) = 6.5e-58
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 487 QYLTVKDNQVVHLHPSNC---LDH-KPEWVIYNEYVLTSRNFIR 526
+++T K++ VH+HPS+ + H +++Y+E + TSR FIR
Sbjct: 1258 KFVT-KNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1300
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 415 (151.1 bits), Expect = 8.2e-58, Sum P(3) = 8.2e-58
Identities = 112/351 (31%), Positives = 186/351 (52%)
Query: 108 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 167
+ +EA + +V P G +LVFL G EI+ ++ + + PL+S
Sbjct: 831 ELIEALLEWIVDGKHAYPPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 890
Query: 168 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 227
+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y+
Sbjct: 891 SLSSEEQQAVFVKPPMGVT-------KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 943
Query: 228 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 287
+ESL + +S+A+A QR GRAGR G CF L+T +N+ L Q PEI R L
Sbjct: 944 GKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQ 1003
Query: 288 TVLTLKKLGI---DDL--VHFDFMDPPAPETLMRALEV-LNYLGALDDDGNLTEMGEKMS 341
L +K L + +L V ++PP ++L RA +V L LGAL D LT +G ++
Sbjct: 1004 LCLRIKILEMFSTHNLQSVFSRLIEPPHIDSL-RASKVRLRDLGALTPDEKLTPLGYHLA 1062
Query: 342 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGD 401
P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A++ K F + D
Sbjct: 1063 SLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSD 1122
Query: 402 HLTLLNVYHAYKQNNEDPS-----WCYDNFVNHRALKSADNVRQQLVRIMA 447
+L LL Y ++ + ++ + +C NF++ R L+ ++++Q +++
Sbjct: 1123 YLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLS 1173
Score = 185 (70.2 bits), Expect = 8.2e-58, Sum P(3) = 8.2e-58
Identities = 37/92 (40%), Positives = 58/92 (63%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR D L+ I++DE HERT +D L +LK+++ R L++++MSAT
Sbjct: 644 YCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 703
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
L+A F YF P++ +PGR PV+ F+ ++
Sbjct: 704 LDAGLFSKYFSYCPVITIPGRAFPVDQFFLED 735
Score = 63 (27.2 bits), Expect = 8.2e-58, Sum P(3) = 8.2e-58
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 487 QYLTVKDNQVVHLHPSNC---LDH-KPEWVIYNEYVLTSRNFIR 526
+++T K++ VH+HPS+ + H +++Y+E + TSR FIR
Sbjct: 1255 KFVT-KNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1297
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 599 (215.9 bits), Expect = 9.1e-58, Sum P(2) = 9.1e-58
Identities = 161/509 (31%), Positives = 266/509 (52%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y+TD LL+ M D L +++DEAHER+L TD+L LL+++L R DL+LV+MSAT
Sbjct: 399 YMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSAT 458
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVF 132
+A + Y + ++ V GR PVEI Y+ + +VV + +GD++
Sbjct: 459 ADANQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEE------NSVVG-RIASYAGDVVKM 511
Query: 133 LTGEEEIEDACRKITKEITNMGDQVGPVK--VVPLYSTLPPAMQQKIFEXXXXXXXXXXX 190
+ E I +T+ + + V P LP + K+
Sbjct: 512 AVEIHKTEKE-GTILAFLTSQAEVEWACERFVAPSAIALP--LHGKLSFEEQFMVFQNYP 568
Query: 191 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK++ +TNIAETSLTI G+ YVID G K+ Y PR + L V +S++SA QR+GR
Sbjct: 569 GRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGR 628
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PG+C+RLY++ F++ + PEI R +L +L + LGID++ F+F+D P
Sbjct: 629 AGRTEPGRCYRLYSKTDFDS-MNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPV 687
Query: 311 PETLMRALEVLNYLGAL-DDDG--NLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILS 367
PE + A++ L LGA+ + +G LT+ G + + L+P++ K+++ ++ E +
Sbjct: 688 PEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIV 747
Query: 368 ISAMLSVPN---CFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP--SWC 422
++A+++ + C V + + AD K +F + +GD TLL+VY + D WC
Sbjct: 748 LAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWC 807
Query: 423 YDNFVNHRALKSADNVRQQLVRIMARFNLKLCS--------NDFNSRDYYVN-IRKAMLA 473
++N +N ++++ ++ ++L + R L L S N+ D Y+ + A LA
Sbjct: 808 WENSLNAKSMRRCEDTVKELEICIER-ELTLVSPSYWVWNPNEGTKHDKYLKMVILASLA 866
Query: 474 GYFMQVAHLERTGQYLTVKDNQVVHLHPS 502
++ G Y +Q V LHPS
Sbjct: 867 ENVAMYTGYDQLG-YEVALTSQQVQLHPS 894
Score = 165 (63.1 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 58/238 (24%), Positives = 111/238 (46%)
Query: 333 LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPN---CFVRPREAQKAAD 389
LT+ G + + L+P++ K+++ ++ E + ++A+++ + C V + + AD
Sbjct: 713 LTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKAD 772
Query: 390 EAKARFGHIDGDHLTLLNVYHAYKQNNEDP--SWCYDNFVNHRALKSADNVRQQLVRIMA 447
K +F + +GD TLL+VY + D WC++N +N ++++ ++ ++L +
Sbjct: 773 RLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEICIE 832
Query: 448 RFNLKLCS--------NDFNSRDYYVN-IRKAMLAGYFMQVAHLERTGQYLTVKDNQVVH 498
R L L S N+ D Y+ + A LA ++ G Y +Q V
Sbjct: 833 R-ELTLVSPSYWVWNPNEGTKHDKYLKMVILASLAENVAMYTGYDQLG-YEVALTSQQVQ 890
Query: 499 LHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVT--DVRGEWLIDIAPHYYDLSNFPQ 551
LHPS L KP WV++ E + ++ VT D +++D P + D S +
Sbjct: 891 LHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLDPPPPF-DASQMDE 947
Score = 40 (19.1 bits), Expect = 9.1e-58, Sum P(2) = 9.1e-58
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 472 LAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDHK 508
L G Q+ HLE ++LTV VH + + +D +
Sbjct: 1048 LFGSGAQIKHLEVDQRFLTVD----VHYYGDDVVDDR 1080
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 403 (146.9 bits), Expect = 1.2e-57, Sum P(3) = 1.2e-57
Identities = 101/306 (33%), Positives = 167/306 (54%)
Query: 193 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 252
RKIV++TNIAETS+TID +VYVID G K+ ++ + + ++ +SKA+A QR GRAG
Sbjct: 531 RKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAG 590
Query: 253 RTQPGKCFRLYT--EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDP 308
R QPG C+ LY S +D Q PEILR+ L L +K L + + +F MDP
Sbjct: 591 RVQPGHCYHLYNGLRASLLDDYQ---LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDP 647
Query: 309 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 368
P+ E ++ ++ L L ALD LT +G ++ P++P + KM++ + C + +L+I
Sbjct: 648 PSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTI 707
Query: 369 SAMLSVPNCFVRPREAQKAADEAKARFGH-IDGDHLTLLNVYHAYKQNNE-----DPSWC 422
+A LS + FV P +K AD + DHLT++N + +++ + +C
Sbjct: 708 AASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYC 767
Query: 423 YDNFVNHRALKSADNVRQQLVRIM--ARF----NLKLCSNDFNSRDYYVNIRKAMLAGYF 476
++ F++ L+ N++ Q + A F N K ++ NS + + I+ + AG +
Sbjct: 768 WEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKI-IKAVICAGLY 826
Query: 477 MQVAHL 482
+VA +
Sbjct: 827 PKVAKI 832
Score = 204 (76.9 bits), Expect = 1.2e-57, Sum P(3) = 1.2e-57
Identities = 41/85 (48%), Positives = 56/85 (65%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G++L+ +DP L IVLDE HER L +DVL ++K++L R DLK+++MSAT
Sbjct: 309 YCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSAT 368
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPV 97
L AEKF YF P++ +PG PV
Sbjct: 369 LNAEKFSEYFGNCPMIHIPGFTFPV 393
Score = 64 (27.6 bits), Expect = 8.7e-15, Sum P(3) = 8.7e-15
Identities = 30/130 (23%), Positives = 62/130 (47%)
Query: 418 DPSWCYDNFVNHRALKSADNVRQQLVRIM--ARF----NLKLCSNDFNSRDYYVNIRKAM 471
+ +C++ F++ L+ N++ Q + A F N K ++ NS + + I+ +
Sbjct: 763 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKI-IKAVI 821
Query: 472 LAGYFMQVA----HLERTGQYLTV--KDNQVVHLHPSNC----LDHKPEWVIYNEYVLTS 521
AG + +VA +L + + + V K + +V +HP + D W+IY+ + TS
Sbjct: 822 CAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTS 881
Query: 522 RNFIRTVTDV 531
++ T+V
Sbjct: 882 SIYLYDCTEV 891
Score = 47 (21.6 bits), Expect = 1.2e-57, Sum P(3) = 1.2e-57
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 97 VEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 139
V++ E ++ L + + I + E G ILVFL G + I
Sbjct: 459 VDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNI 501
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 429 (156.1 bits), Expect = 1.8e-57, Sum P(2) = 1.8e-57
Identities = 121/392 (30%), Positives = 196/392 (50%)
Query: 110 LEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQV---GPVK--VVP 164
LE + I + E G ILVFL G + I T M DQ+ G + ++P
Sbjct: 486 LELTAALIRHIAVNENEGAILVFLPGWDNIS------TLNDLLMSDQMFKSGRYRFIIIP 539
Query: 165 LYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKV 224
L+S +P Q ++ RKIV++TNIAETS+TID +VYVID G K+
Sbjct: 540 LHSLMPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETH 599
Query: 225 YNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSN 284
++ + + ++ +S A+A QR GRAGR PGKC+ LY + L PEI R+
Sbjct: 600 FDTQNNIRTMTAEWVSIANAKQRKGRAGRVSPGKCYHLYNGLRASL-LDNYQLPEIQRTP 658
Query: 285 LANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSE 342
L L +K L + + F MDPP+ + A+ L L ALD D LT +G ++
Sbjct: 659 LEELCLQIKVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLTPLGFHLAR 718
Query: 343 FPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHID-GD 401
P++P + KM++ C + +L+I+A LS + F P +K AD+ + F D
Sbjct: 719 MPVEPHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADQRRKMFSQNSRSD 778
Query: 402 HLTLLNVY----HAYKQNNE-DPSWCYDNFVNHRALKSADNVRQQLVRIMARFNL----- 451
HL+++N + A +Q + + +C+DNF++ L+ N++ Q + R
Sbjct: 779 HLSIVNAFLGWEDAKRQGSRFEREYCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVNSKD 838
Query: 452 -KLCSNDFNSRDYYVNIRKAMLAGYFMQVAHL 482
K S++ NS + + ++ ++AG + +VA +
Sbjct: 839 PKDPSSNINSENKKL-VKAVIVAGLYPKVAKI 869
Score = 201 (75.8 bits), Expect = 1.8e-57, Sum P(2) = 1.8e-57
Identities = 39/92 (42%), Positives = 60/92 (65%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G++L+ +DP L +VLDE HER++ +D+L ++K++L R DLK+V+MSAT
Sbjct: 322 YCTTGVILQWLHSDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSAT 381
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
L AEKF YF P++ +PG PV + ++
Sbjct: 382 LNAEKFSKYFNNCPMIHIPGYTFPVTEYLLED 413
Score = 68 (29.0 bits), Expect = 9.0e-14, Sum P(3) = 9.0e-14
Identities = 28/128 (21%), Positives = 61/128 (47%)
Query: 421 WCYDNFVNHRALKSADNVRQQLVRIMARFNL------KLCSNDFNSRDYYVNIRKAMLAG 474
+C+DNF++ L+ N++ Q + R K S++ NS + + ++ ++AG
Sbjct: 803 YCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVNSKDPKDPSSNINSENKKL-VKAVIVAG 861
Query: 475 YFMQVA-----HLERTGQYLTV--KDNQVVHLHPSNCLDHKPE----WVIYNEYVLTSRN 523
+ +VA H ++ + V K + V +HP + + + W++Y+ + T+
Sbjct: 862 LYPKVAKISPSHNKKRPMPVKVYTKADGKVCIHPKSVNAEETQFQYKWLVYHLKMKTTSI 921
Query: 524 FIRTVTDV 531
F+ T+V
Sbjct: 922 FLYDCTEV 929
Score = 37 (18.1 bits), Expect = 9.0e-14, Sum P(3) = 9.0e-14
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 321 LNYLGALDDDGNL 333
+ LG +DDD N+
Sbjct: 472 IEVLGMMDDDDNI 484
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 599 (215.9 bits), Expect = 1.8e-57, Sum P(2) = 1.8e-57
Identities = 159/509 (31%), Positives = 268/509 (52%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y+TD LL+ M D L +++DEAHER+L TD+L LLK++L R DL+LV+MSAT
Sbjct: 402 YMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSAT 461
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYT-QEPERDYLEAAIRTVVQIHMCEPSGDILV 131
+A++ YF+ ++ V GR PVEI Y+ + E + + I + V GD++
Sbjct: 462 ADAKQLSQYFFSCGILLVNGRNFPVEIVYSPSDTEENSVVGGIASYV--------GDVVK 513
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVK--VVPLYSTLPPAMQQKIFEXXXXXXXXXX 189
+ E I +T+ + + + P LP + K+
Sbjct: 514 MAVEIHKTEKE-GTILAFLTSQAEVEWACERFITPSAIALP--LHGKLSFEEQFRVFQNH 570
Query: 190 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 249
RK++ +TNIAETSLTI G+ YVID G K+ Y PR + L V +S++SA QR+G
Sbjct: 571 PGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAG 630
Query: 250 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 309
RAGRT+PG+C+RLY++ F++ + PEI R +L +L + LG++++ F+F+D P
Sbjct: 631 RAGRTEPGRCYRLYSKNDFDS-MNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAP 689
Query: 310 APETLMRALEVLNYLGAL-DDDG--NLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEIL 366
PE + A++ L LGA+ + +G LT+ G + + L+P++ K+++ ++ E +
Sbjct: 690 VPEAIAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGI 749
Query: 367 SISAMLSVPN---CFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ--NNEDPSW 421
++A+++ + C V + + AD K +F + +GD TLL+VY + W
Sbjct: 750 VLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKW 809
Query: 422 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDF---NSRD---YYVNIRKAMLAGY 475
C++N +N ++++ ++ ++L + R L L S + N + + +++ +LA
Sbjct: 810 CWENSLNAKSMRRCEDTVKELEICIER-ELTLVSPSYWVWNPNEGTKHDKHLKMVILASL 868
Query: 476 FMQVAHLERTGQ--YLTVKDNQVVHLHPS 502
VA Q Y Q V LHPS
Sbjct: 869 AENVAMYTGYNQLGYEVALTGQQVQLHPS 897
Score = 161 (61.7 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 56/237 (23%), Positives = 111/237 (46%)
Query: 333 LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPN---CFVRPREAQKAAD 389
LT+ G + + L+P++ K+++ ++ E + ++A+++ + C V + + AD
Sbjct: 716 LTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKAD 775
Query: 390 EAKARFGHIDGDHLTLLNVYHAYKQ--NNEDPSWCYDNFVNHRALKSADNVRQQLVRIMA 447
K +F + +GD TLL+VY + WC++N +N ++++ ++ ++L +
Sbjct: 776 RLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEICIE 835
Query: 448 RFNLKLCSNDF---NSRD---YYVNIRKAMLAGYFMQVAHLERTGQ--YLTVKDNQVVHL 499
R L L S + N + + +++ +LA VA Q Y Q V L
Sbjct: 836 R-ELTLVSPSYWVWNPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQQVQL 894
Query: 500 HPSNCL---DHKPEWVIYNEYVLTSRNFIRTVT--DVRGEWLIDIAPHYYDLSNFPQ 551
HPS L KP WV++ E + ++ VT D +++D P + D+S +
Sbjct: 895 HPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTACDFEALYMLDPPPPF-DVSQMDE 950
Score = 37 (18.1 bits), Expect = 1.8e-57, Sum P(2) = 1.8e-57
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 472 LAGYFMQVAHLERTGQYLTV 491
L G Q+ HLE ++LTV
Sbjct: 1051 LFGSGAQIKHLEVDQRFLTV 1070
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 397 (144.8 bits), Expect = 6.5e-57, Sum P(3) = 6.5e-57
Identities = 106/347 (30%), Positives = 180/347 (51%)
Query: 109 YLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYST 168
YLE R+ Q E G +L+FL G I+ ++ + ++ KV+ L+S
Sbjct: 853 YLEITDRSP-QFKNVE--GAVLIFLPGLAHIQQLYDLLSTDRRFFSERY---KVIALHSI 906
Query: 169 LPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPR 228
L Q F RKIV++TNIAET +TI +V+VID G K+ Y+
Sbjct: 907 LSTQDQAAAF-------TLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 229 VRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANT 288
++ SL+ + +SKASA QR GRAGR + G CFR+YT + F + + PEILR L
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEEL 1018
Query: 289 VLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPL 345
L + K + F +DPP + + A+ +L +GA + ++ LT +G+ ++ P+
Sbjct: 1019 CLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPV 1078
Query: 346 DPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTL 405
+ ++ KML+ + C + + +++A+++ + F P + AD AK+ D DHLT+
Sbjct: 1079 NVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTI 1138
Query: 406 LNVYHAYKQNNEDP------SWCYDNFVNHRALKSADNVRQQLVRIM 446
N Y +K+ ++ ++C NF+N +L + + R L+++M
Sbjct: 1139 YNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLERRRTTLLKLM 1185
Score = 225 (84.3 bits), Expect = 6.5e-57, Sum P(3) = 6.5e-57
Identities = 40/92 (43%), Positives = 65/92 (70%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT
Sbjct: 674 YCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSAT 733
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
+++EKF YF P++++ GR +PVE+F+ ++
Sbjct: 734 VDSEKFSTYFTHCPILRISGRSYPVEVFHLED 765
Score = 41 (19.5 bits), Expect = 6.5e-57, Sum P(3) = 6.5e-57
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 499 LHPSNC-LDHKPE-WVIYNEYVLTSRNFIRTVT 529
+HPS+ D + W++Y E + +R ++R T
Sbjct: 1256 VHPSSVNRDLQTYGWLLYQEKIRYARVYLRETT 1288
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 593 (213.8 bits), Expect = 6.9e-57, P = 6.9e-57
Identities = 158/457 (34%), Positives = 247/457 (54%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+LT+G+LLR+ D LLE+Y VI+LDE HER L +D+L GLL+++ R DLKL++MSAT
Sbjct: 165 FLTEGLLLRQMEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTKRDDLKLILMSAT 224
Query: 73 LEAEKFQGYFYGAPLMKVPGRL-------HPVEIFYTQEPERDYL---EAAIRTVVQIHM 122
+ + F+GYF GAP+++VPGRL HP++ F Q ++ + E ++ + I
Sbjct: 225 INLDLFKGYFEGAPVVQVPGRLFPIDVRWHPIKQFIDQSDKKTHKIDPEPYLKILELIDK 284
Query: 123 CEPS---GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFE 179
PS GD L+FL G EI + + + N + ++ L+STL Q K+F+
Sbjct: 285 QFPSTQRGDALIFLNGVAEIS----MVAEHLKNYAELTNGWIILMLHSTLSVEEQDKVFD 340
Query: 180 XXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPI 239
RK ++STN+AETS+TIDGI +VID G + P + L +
Sbjct: 341 QAPVGI-------RKCILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKLTEFWV 393
Query: 240 SKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTL--KKLGI 297
SKASA+QR GRAGRT PG C+RLY+++ F + T EI R +L L + LG+
Sbjct: 394 SKASANQRKGRAGRTGPGICYRLYSQEQFEK-MDDFTVSEINRVSLQEMALKMISLNLGL 452
Query: 298 DDLVHFDFMDPPAPETLMRALEVLNYLGALDDD-GN---LTEMGEKMSEFPLDPQMSKML 353
D F F++ P+ + L LEVL + L D G+ LT +G +S+ P++ ++KML
Sbjct: 453 DPRT-FPFIEKPSEDVLNEGLEVLKFQRVLRSDRGDILTLTALGNMVSKLPVEVPIAKML 511
Query: 354 VESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAY- 412
V + +L+++A LSV + F + E +A GD TL++++ +
Sbjct: 512 VYGCVVDELEVMLTVAAGLSVQSPFTNRSYRELEIVERRASLTSPLGDPFTLISIFREWV 571
Query: 413 -KQNNEDPS--WCYDNFVNHRALKSADNVRQQLVRIM 446
++ E + W +N ++ L +R Q +I+
Sbjct: 572 LQKAFEGTARRWTMENGIDEHRLYEISKLRAQYRQIL 608
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 111/237 (46%), Positives = 169/237 (71%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ + L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SA
Sbjct: 36 KYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSA 95
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++AEKF +F P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+
Sbjct: 96 TMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILI 155
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 191
F+ G+E+IE +I + + + + + V+P+YS LP +Q KIF+
Sbjct: 156 FMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV------ 208
Query: 192 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 248
RK +V+TNIAETSLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRS
Sbjct: 209 -RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRS 264
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 396 (144.5 bits), Expect = 6.4e-56, Sum P(3) = 6.4e-56
Identities = 112/384 (29%), Positives = 196/384 (51%)
Query: 109 YLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYST 168
YLE R+ Q E G +L+FL G I+ ++ + ++ KV+ L+S
Sbjct: 853 YLEITDRSP-QFKNVE--GAVLIFLPGLAHIQQLYDLLSTDRRFFSERY---KVIALHSI 906
Query: 169 LPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPR 228
L Q F RKIV++TNIAET +TI +V+VID G K+ Y+
Sbjct: 907 LSTQDQAAAF-------TLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 229 VRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANT 288
++ SL+ + +SKASA QR GRAGR + G CFR+YT + F + + PEILR L
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEEL 1018
Query: 289 VLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPL 345
L + K + F +DPP + + A+ +L +GA + ++ LT +G+ ++ P+
Sbjct: 1019 CLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPV 1078
Query: 346 DPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTL 405
+ ++ KML+ + C + + +++A+++ + F P + AD AK+ D DHLT+
Sbjct: 1079 NVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTI 1138
Query: 406 LNVYHAYKQNNEDP------SWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFN 459
N Y +K+ ++ ++C NF+N +L + + ++++ + LKL ++
Sbjct: 1139 YNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIKRRRTTL-----LKLIF--YS 1191
Query: 460 SRDYYVNIRKAMLAGYFMQVAHLE 483
+ YY + R + F ++A L+
Sbjct: 1192 IKTYYSSSRASQTLS-FQEIALLK 1214
Score = 225 (84.3 bits), Expect = 6.4e-56, Sum P(3) = 6.4e-56
Identities = 40/92 (43%), Positives = 65/92 (70%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT
Sbjct: 674 YCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSAT 733
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
+++EKF YF P++++ GR +PVE+F+ ++
Sbjct: 734 VDSEKFSTYFTHCPILRISGRSYPVEVFHLED 765
Score = 41 (19.5 bits), Expect = 6.4e-56, Sum P(3) = 6.4e-56
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 499 LHPSNC-LDHKPE-WVIYNEYVLTSRNFIRTVT 529
+HPS+ D + W++Y E + +R ++R T
Sbjct: 1253 VHPSSVNRDLQTYGWLLYQEKIRYARVYLRETT 1285
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 581 (209.6 bits), Expect = 2.1e-55, P = 2.1e-55
Identities = 159/503 (31%), Positives = 261/503 (51%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
++T+G+LLR+ L++Y ++LDE HER L D L G+ K +L+ RP LKL++MSAT
Sbjct: 238 FITEGLLLRQLAVAANLDQYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSAT 297
Query: 73 LEAEKFQGYF--YGAPLMKVPGRLHPVEIFYTQEP--------------ERDYLEAA--I 114
+ E F GYF GA L++VPGRL P+++ Y P +R+ ++ A +
Sbjct: 298 INVELFHGYFGEEGARLVQVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFV 357
Query: 115 RTVVQIHMCEPS---GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPP 171
+ + I P+ GD+L+F++G EIE + + T + V+PL+S
Sbjct: 358 QVLSLIDQQYPTSERGDVLIFVSGVNEIESVVEAVHEYATEQTHWL----VLPLHSGQAI 413
Query: 172 AMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRV 231
A Q K+F+ RK +VSTNIAETSLT+DG+ +V+D G K+ ++ +
Sbjct: 414 ADQSKVFDYAPEGM-------RKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKG 466
Query: 232 ESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLT 291
+ L +SK+SA QR GRAGRT PG CFRLYT + +N + PEI R L +L
Sbjct: 467 QRLKEFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQYNA-FEAYPTPEIYRVPLDTMLLQ 525
Query: 292 LKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSK 351
+ +G+ D+ F F++ P E + + + L AL + +T +G ++ P++ + K
Sbjct: 526 MVSMGLPDVRAFPFIEAPETERIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGK 585
Query: 352 MLVESPKYNCSNEILSISAMLSVPNCFV-RPREAQKAADEAKA-RFGHIDGDHLTLLNVY 409
ML+ + ++L+++AMLSV N R Q+ E ++ H GD TL+ +Y
Sbjct: 586 MLLMGSVFPEVEQLLTLAAMLSVQNPLTNRAHTDQRCVRERESLESDH--GDLFTLVRLY 643
Query: 410 HAYKQ--NNEDPS--WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYV 465
+ + Q D + WC + + +RQQ RI+ + + S D +S+
Sbjct: 644 NVWVQLKMRRDGTRQWCRRLGIEEQRFYEVTKLRQQFQRILESCGMVVAS-DSDSQ--LT 700
Query: 466 NIRKAMLAGYFMQVAHLERTGQY 488
+ +A G Q+ ++R ++
Sbjct: 701 SAERATRHGELRQLKAMKRRQRF 723
>UNIPROTKB|Q05BE5 [details] [associations]
symbol:DHX33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33,
isoform CRA_c" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 EMBL:CH471108 GO:GO:0004386 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC004148 UniGene:Hs.250456
HGNC:HGNC:16718 ChiTaRS:DHX33 EMBL:BC050409 IPI:IPI00789223
SMR:Q05BE5 Ensembl:ENST00000433302 UCSC:uc010clf.3
HOVERGEN:HBG082280 Uniprot:Q05BE5
Length = 483
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 119/318 (37%), Positives = 183/318 (57%)
Query: 231 VESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVL 290
+E L V +SK A QR+GRAGR G C+RLYTE F T PEI R NLA+ +L
Sbjct: 162 LEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEK-FDKMTVPEIQRCNLASVML 220
Query: 291 TLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFPLDP 347
L + + +++ FDFM P+P+ + A+ L+ LGAL DD LT MG KM+ FPL+P
Sbjct: 221 QLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEP 280
Query: 348 QMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLN 407
+ +K ++ SPK++C+ EIL+I ++LSV + P ++ + +F +GDH+TLLN
Sbjct: 281 KFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLN 340
Query: 408 VYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNI 467
+Y +K + WC +NFVN + + VR QL I + ++ + S SR ++
Sbjct: 341 IYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIAS----SRGDVESV 396
Query: 468 RKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIR 526
R+ + FM A L+ G Y T +Q V +HPS+ L H KP V+Y E + T++ ++R
Sbjct: 397 RRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMR 456
Query: 527 TVTDVRGEWLIDIAPHYY 544
+ + +WL + AP Y+
Sbjct: 457 DLCVIDAQWLYEAAPEYF 474
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 329 (120.9 bits), Expect = 3.2e-55, Sum P(3) = 3.2e-55
Identities = 93/254 (36%), Positives = 134/254 (52%)
Query: 135 GEEEIEDACRKITKEITNMGD-QVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXR 193
G EE D + E + MG Q P+ V+PLYS L Q +IF R
Sbjct: 592 GLEEDNDDELGLEDE-SGMGSGQRQPLWVLPLYSLLSSEKQNRIF-------LPVPDGCR 643
Query: 194 KIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGR 253
VVSTN+AETSLTI I YV+D G K ++Y+ V + +V+ SKASA QR+GRAGR
Sbjct: 644 LCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGR 703
Query: 254 TQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPET 313
G C+RLY+ +N+ + + P+I + + + +L ++ +GID +VHF F PP
Sbjct: 704 ISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQ 763
Query: 314 LMRALEVLNYLGALD----DDGNL----TEMGEKMSEFPLDPQMSKMLVESPKYNCSNEI 365
L A L LGAL+ ++ +L T +G +S FP+ P+ KML S + N
Sbjct: 764 LQAAERRLIVLGALEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYT 823
Query: 366 LSISAMLSVPNCFV 379
+ + A LSV +
Sbjct: 824 VCLVAALSVQEVLI 837
Score = 278 (102.9 bits), Expect = 3.2e-55, Sum P(3) = 3.2e-55
Identities = 60/145 (41%), Positives = 88/145 (60%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL----KNRPDLKLV 67
+++TDG+LL+E TD LL +Y VI+LDEAHER++ TD+L GLL ++ K LKL+
Sbjct: 353 KFMTDGVLLKEIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLI 412
Query: 68 VMSATLEAEKFQG----YFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMC 123
+MSATL F + PL+KV R PV I + + DY+ A R ++IH
Sbjct: 413 IMSATLRVSDFTENTRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNK 472
Query: 124 EPSGDILVFLTGEEEIEDACRKITK 148
P G IL+F+TG++E+ RK+ +
Sbjct: 473 LPEGGILIFVTGQQEVNQLVRKLRR 497
Score = 86 (35.3 bits), Expect = 3.2e-55, Sum P(3) = 3.2e-55
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 499 LHPSNCLDHK-PEWVIYNE-YVL----TSRNFIRTVTDVRGEWLIDIAP 541
LH S+ L K PEWVIY E Y L +++ FIR +T + EWL+ P
Sbjct: 991 LHVSSVLRQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVP 1039
Score = 44 (20.5 bits), Expect = 9.0e-25, Sum P(3) = 9.0e-25
Identities = 16/63 (25%), Positives = 25/63 (39%)
Query: 358 KY--NCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN 415
KY +C + + L+ + FV ++ +AD+ R G I H L Y
Sbjct: 662 KYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDC 721
Query: 416 NED 418
ED
Sbjct: 722 FED 724
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 455 (165.2 bits), Expect = 4.8e-55, Sum P(2) = 4.8e-55
Identities = 114/362 (31%), Positives = 194/362 (53%)
Query: 127 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXX 186
G IL+FL G EI ++I K N +PL+S L A Q+ IF+
Sbjct: 821 GSILIFLPGVLEISSTIKEINKSSDNK------FMALPLHSGLTSAEQKSIFKTAPKGK- 873
Query: 187 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 246
RK+VVSTNIAETS+TI V VID G +K ++ ++ L+ S S+A Q
Sbjct: 874 ------RKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQ 927
Query: 247 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--D 304
R GRAGR G C+ LYT+++F +Q Q PEI R+ L N L +K +GI ++ F
Sbjct: 928 RRGRAGRVTAGTCYHLYTKETFEA-MQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSS 986
Query: 305 FMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNE 364
+D P +L +A + L+ +GAL ++ +LT++G +S P DPQ +K+L+ + C +
Sbjct: 987 GLDAPDKSSLDKANQFLHEIGALQEN-SLTKLGNYISYLPTDPQSAKLLILGCIFGCLDI 1045
Query: 365 ILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYD 424
L+++A+ S + F+ E + + + +FG+ GD +++ N Y+AY +N+ + +
Sbjct: 1046 CLTLAAISSTGSPFINSYEQRDKLKQIQKKFGNGQGDFISMANAYNAY-MSNKSKRFLTE 1104
Query: 425 NFVNHRALKSADNVRQQLVRIMARF---NLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 481
N++++ +K + R Q + ++ N KL + + + + IR + ++ QVA
Sbjct: 1105 NYLSYTTIKDITSTRSQYLSLLVELGFVNRKLDDSCNKNAENWPLIRGIIAGAFYPQVAR 1164
Query: 482 LE 483
++
Sbjct: 1165 IQ 1166
Score = 156 (60.0 bits), Expect = 4.8e-55, Sum P(2) = 4.8e-55
Identities = 47/160 (29%), Positives = 80/160 (50%)
Query: 13 YLTDGMLLR---EAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 69
+ T G+LLR + + +L+ I++DE HER++ D L LLK+++K+ P LK++++
Sbjct: 671 FATTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILL 730
Query: 70 SATLEAEKFQGYFYGAPL--MKVPGRLHPVEIFYTQE--PERDYLEAAIRTVVQIHMCEP 125
SAT+ + F +F PL + + GR +P++ FY E +Y + P
Sbjct: 731 SATISVDTFINFFE-KPLTPLHIEGRTYPIQDFYLDSILAESEY---KFQNS-DGEFITP 785
Query: 126 SGDILVFLTGE---EEIEDACRKITKEITNMGDQVGPVKV 162
S D + +G E I R I K +T Q G + +
Sbjct: 786 SADSHFYKSGNLNYELIAHVTRFIDKRLTQEAKQDGSILI 825
Score = 37 (18.1 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 35 IVLDEAHERTLATDVLFGLLKEVLKNRPD 63
IV+ + +E TLA + +++E+LK D
Sbjct: 459 IVVSK-NEYTLANYIKLAIVRELLKYLTD 486
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 455 (165.2 bits), Expect = 4.8e-55, Sum P(2) = 4.8e-55
Identities = 114/362 (31%), Positives = 194/362 (53%)
Query: 127 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXX 186
G IL+FL G EI ++I K N +PL+S L A Q+ IF+
Sbjct: 821 GSILIFLPGVLEISSTIKEINKSSDNK------FMALPLHSGLTSAEQKSIFKTAPKGK- 873
Query: 187 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 246
RK+VVSTNIAETS+TI V VID G +K ++ ++ L+ S S+A Q
Sbjct: 874 ------RKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQ 927
Query: 247 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--D 304
R GRAGR G C+ LYT+++F +Q Q PEI R+ L N L +K +GI ++ F
Sbjct: 928 RRGRAGRVTAGTCYHLYTKETFEA-MQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSS 986
Query: 305 FMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNE 364
+D P +L +A + L+ +GAL ++ +LT++G +S P DPQ +K+L+ + C +
Sbjct: 987 GLDAPDKSSLDKANQFLHEIGALQEN-SLTKLGNYISYLPTDPQSAKLLILGCIFGCLDI 1045
Query: 365 ILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYD 424
L+++A+ S + F+ E + + + +FG+ GD +++ N Y+AY +N+ + +
Sbjct: 1046 CLTLAAISSTGSPFINSYEQRDKLKQIQKKFGNGQGDFISMANAYNAY-MSNKSKRFLTE 1104
Query: 425 NFVNHRALKSADNVRQQLVRIMARF---NLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 481
N++++ +K + R Q + ++ N KL + + + + IR + ++ QVA
Sbjct: 1105 NYLSYTTIKDITSTRSQYLSLLVELGFVNRKLDDSCNKNAENWPLIRGIIAGAFYPQVAR 1164
Query: 482 LE 483
++
Sbjct: 1165 IQ 1166
Score = 156 (60.0 bits), Expect = 4.8e-55, Sum P(2) = 4.8e-55
Identities = 47/160 (29%), Positives = 80/160 (50%)
Query: 13 YLTDGMLLR---EAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 69
+ T G+LLR + + +L+ I++DE HER++ D L LLK+++K+ P LK++++
Sbjct: 671 FATTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILL 730
Query: 70 SATLEAEKFQGYFYGAPL--MKVPGRLHPVEIFYTQE--PERDYLEAAIRTVVQIHMCEP 125
SAT+ + F +F PL + + GR +P++ FY E +Y + P
Sbjct: 731 SATISVDTFINFFE-KPLTPLHIEGRTYPIQDFYLDSILAESEY---KFQNS-DGEFITP 785
Query: 126 SGDILVFLTGE---EEIEDACRKITKEITNMGDQVGPVKV 162
S D + +G E I R I K +T Q G + +
Sbjct: 786 SADSHFYKSGNLNYELIAHVTRFIDKRLTQEAKQDGSILI 825
Score = 37 (18.1 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 35 IVLDEAHERTLATDVLFGLLKEVLKNRPD 63
IV+ + +E TLA + +++E+LK D
Sbjct: 459 IVVSK-NEYTLANYIKLAIVRELLKYLTD 486
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 467 (169.5 bits), Expect = 7.2e-55, Sum P(2) = 7.2e-55
Identities = 140/471 (29%), Positives = 245/471 (52%)
Query: 104 EPERDYLEAAIRTVVQI-HMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 162
+ E+ L+ + + I H C+ +G IL+FL G +EI +I + D +V
Sbjct: 615 DDEKVDLDLIMHLLYNICHSCD-AGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQV 673
Query: 163 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 222
L+S + + Q+K+ + RKI++STNIAETS+T++ +V+VID G K+
Sbjct: 674 FMLHSNMQTSDQKKVLKNPPAGV-------RKIILSTNIAETSITVNDVVFVIDSGKVKE 726
Query: 223 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 282
K ++ V L + ISKASA QR GRAGR +PG CFRL++ F N L+ QT PE+LR
Sbjct: 727 KSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLR 785
Query: 283 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMR-ALEVLNYLGALDDDGNLTEMG 337
L L K L + DF+ +PP P ++R A+++L + A+D +LTE+G
Sbjct: 786 MPLQELCLHTKLLAPVNCTIADFLMKAPEPP-PALIVRNAVQMLKTIDAMDAWEDLTELG 844
Query: 338 EKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA--QKAADEAKARF 395
+++ P++P + KM++ + C + IL+I+ L+ + FV P +A ++AA + RF
Sbjct: 845 YHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRF 904
Query: 396 -GHIDGDHLTLLNVYHAYKQNNEDP---SWCYDNFVNHRALKSADNVRQQLVR------- 444
DH+ LL + A+++ D ++C NF++ ++ +R QL+
Sbjct: 905 TAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGF 964
Query: 445 IMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNC 504
+ AR + + NS ++ V ++ A++AG + + H++R LT + V HP++
Sbjct: 965 VRARGGGDIRDVNTNSENWAV-VKAALVAGMYPNLVHVDRENVILTGPKEKKVRFHPTSV 1023
Query: 505 LDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLI-DIAPHYYDLSNFPQCEA 554
L +P++ + + + + + +WLI D + ++N C A
Sbjct: 1024 LS-QPQY----KKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSA 1069
Score = 143 (55.4 bits), Expect = 7.2e-55, Sum P(2) = 7.2e-55
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 13 YLTDGMLLREAMT-DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+ T+G+LLR M D L +++DE HER +D L L+++L+ P LKL++ SA
Sbjct: 305 FCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSA 364
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEI 99
L+ F YF P++ + GR P E+
Sbjct: 365 ALDVNLFIRYFGSCPVIYIQGR--PFEV 390
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 465 (168.7 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 139/471 (29%), Positives = 245/471 (52%)
Query: 104 EPERDYLEAAIRTVVQI-HMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 162
+ E+ L+ + + I H C+ +G +L+FL G +EI +I + D +V
Sbjct: 600 DDEKVDLDLIMHLLYNICHSCD-AGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQV 658
Query: 163 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 222
L+S + + Q+K+ + RKI++STNIAETS+T++ +V+VID G K+
Sbjct: 659 FMLHSNMQTSDQKKVLKNPPAGV-------RKIILSTNIAETSITVNDVVFVIDSGKVKE 711
Query: 223 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 282
K ++ V L + ISKASA QR GRAGR +PG CFRL++ F N L+ QT PE+LR
Sbjct: 712 KSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLR 770
Query: 283 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMR-ALEVLNYLGALDDDGNLTEMG 337
L L K L + DF+ +PP P ++R A+++L + A+D +LTE+G
Sbjct: 771 MPLQELCLHTKLLAPVNCPIADFLMKAPEPP-PALIVRNAVQMLKTIDAMDTWEDLTELG 829
Query: 338 EKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA--QKAADEAKARF 395
+++ P++P + KM++ + C + IL+I+ L+ + FV P +A ++AA + RF
Sbjct: 830 YHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRF 889
Query: 396 -GHIDGDHLTLLNVYHAYKQNNEDP---SWCYDNFVNHRALKSADNVRQQLVR------- 444
DH+ LL + A+++ D ++C NF++ ++ +R QL+
Sbjct: 890 TAGAFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGF 949
Query: 445 IMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNC 504
+ AR + + NS ++ V ++ A++AG + + H++R LT + V HP++
Sbjct: 950 VRARGGGDIRDVNTNSENWAV-VKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPASV 1008
Query: 505 LDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLI-DIAPHYYDLSNFPQCEA 554
L +P++ + + + + + +WLI D + ++N C A
Sbjct: 1009 LS-QPQY----KKIPPANGQAAAIKALPTDWLIYDEMTRAHRIANIRCCSA 1054
Score = 143 (55.4 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 13 YLTDGMLLREAMT-DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+ T+G+LLR M D L +++DE HER +D L L+++L+ P LKL++ SA
Sbjct: 290 FCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSA 349
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEI 99
L+ F YF P++ + GR P E+
Sbjct: 350 ALDVNLFIRYFGSCPVIYIQGR--PFEV 375
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 392 (143.0 bits), Expect = 1.2e-54, Sum P(3) = 1.2e-54
Identities = 101/330 (30%), Positives = 177/330 (53%)
Query: 127 GDILVFLTGEEEIEDACRKI-TKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXX 185
G +L+FL G I+ I T ++ D+ +++ L+S L Q F
Sbjct: 869 GAVLIFLPGLAHIQQLYDLISTDRRFSLCDRH---RLIALHSVLSTQDQAAAF------- 918
Query: 186 XXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAH 245
RKIV++TNIAET +TI +V+VID G K+ Y+ ++ SL + +SKASA
Sbjct: 919 TVPPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASAL 978
Query: 246 QRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF-- 303
QR GRAGR + G CFR+YT F + ++ + PEILR L L + K + F
Sbjct: 979 QRQGRAGRVRDGFCFRMYTRDRFESFME-YSVPEILRVPLEELCLHIMKCNLGSPEDFLS 1037
Query: 304 DFMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCS 362
+DPP P+ + A+ +L +GA ++ LT +G+ ++ P++ ++ KML+ + C
Sbjct: 1038 RALDPPQPQVIGNAMNLLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCL 1097
Query: 363 NEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP--- 419
+ + +++A+++ + F P + AD AK+ DHLT+ N Y +K+ ++
Sbjct: 1098 DPVATLAAVMTEKSPFTTPIGRKDEADLAKSSIALAVSDHLTIYNAYLGWKKARQEGGHR 1157
Query: 420 ---SWCYDNFVNHRALKSADNVRQQLVRIM 446
++C NF+N +L + ++V+Q+L++++
Sbjct: 1158 AEMTYCRRNFLNRTSLLTLEDVKQELIKLV 1187
Score = 226 (84.6 bits), Expect = 1.2e-54, Sum P(3) = 1.2e-54
Identities = 40/92 (43%), Positives = 64/92 (69%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR+ D LL +++DE HER++ +D L +LKE+L R DL L++MSAT
Sbjct: 678 YCTTGVLLRKLQEDGLLSSISHVIVDEVHERSVHSDFLLVILKEILHKRSDLHLILMSAT 737
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
+++EKF YF P++++ GR +PVE+F+ ++
Sbjct: 738 VDSEKFSSYFAHCPILRISGRSYPVEVFHVED 769
Score = 42 (19.8 bits), Expect = 1.2e-54, Sum P(3) = 1.2e-54
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 464 YVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNC-LDHKPE-WVIYNEYVLTS 521
Y N+ K M Y V E+ + + +HPS+ D + W++Y E V +
Sbjct: 1227 YDNVGKIM---YTKSVDITEKLACLVETAQGKA-QVHPSSVNRDLQVHGWLLYQEKVRYA 1282
Query: 522 RNFIRTVT 529
+ ++R T
Sbjct: 1283 KVYLRETT 1290
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 392 (143.0 bits), Expect = 1.9e-54, Sum P(3) = 1.9e-54
Identities = 110/384 (28%), Positives = 194/384 (50%)
Query: 109 YLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYST 168
YLE R+ Q E G +L+FL G I+ ++ + ++ KV+ L+S
Sbjct: 853 YLEITDRSP-QFKNVE--GAVLIFLPGLAHIQQLYDLLSTDRRFFSERY---KVIALHSI 906
Query: 169 LPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPR 228
L Q F RKIV++TNIAET +TI +V+VID G K+ Y+
Sbjct: 907 LSTQDQAAAF-------TLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 229 VRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANT 288
++ SL+ + +SKASA QR GRAGR + G CFR+YT + F + + PEILR L
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEEL 1018
Query: 289 VLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPL 345
L + K + F +DPP + + A+ +L +GA + ++ LT +G+ ++ P+
Sbjct: 1019 CLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPV 1078
Query: 346 DPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTL 405
+ ++ KML+ + C + + +++A+++ + F P + AD AK+ D DHLT+
Sbjct: 1079 NVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTI 1138
Query: 406 LNVYHAYKQNNEDP------SWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFN 459
N Y +K+ ++ ++C NF+N +L + + ++ +A ++ ++
Sbjct: 1139 YNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIKVSFPETIA---IQYFYRFYS 1195
Query: 460 SRDYYVNIRKAMLAGYFMQVAHLE 483
+ YY + L+ F ++A L+
Sbjct: 1196 IKTYYSSSASQTLS--FQEIALLK 1217
Score = 225 (84.3 bits), Expect = 1.9e-54, Sum P(3) = 1.9e-54
Identities = 40/92 (43%), Positives = 65/92 (70%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT
Sbjct: 674 YCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSAT 733
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
+++EKF YF P++++ GR +PVE+F+ ++
Sbjct: 734 VDSEKFSTYFTHCPILRISGRSYPVEVFHLED 765
Score = 41 (19.5 bits), Expect = 1.9e-54, Sum P(3) = 1.9e-54
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 499 LHPSNC-LDHKPE-WVIYNEYVLTSRNFIRTVT 529
+HPS+ D + W++Y E + +R ++R T
Sbjct: 1256 VHPSSVNRDLQTYGWLLYQEKIRYARVYLRETT 1288
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 375 (137.1 bits), Expect = 2.4e-54, Sum P(2) = 2.4e-54
Identities = 81/192 (42%), Positives = 118/192 (61%)
Query: 193 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 252
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ +++ L IS+ASA QR GRAG
Sbjct: 349 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 408
Query: 253 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 312
RT PG CFRLY E ++ P PEI R L + VL +K + + D F F++PP P
Sbjct: 409 RTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPA 467
Query: 313 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 372
+L A+ L GALD LT +G +++ P+D + KML+ ++ +L+I+A L
Sbjct: 468 SLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAAL 527
Query: 373 SVPNCFVRPREA 384
SV + F R ++
Sbjct: 528 SVQSPFTRSAQS 539
Score = 238 (88.8 bits), Expect = 2.4e-54, Sum P(2) = 2.4e-54
Identities = 43/93 (46%), Positives = 64/93 (68%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+LT G+LLR+ +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT
Sbjct: 254 FLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSAT 313
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEP 105
+ F YF AP+++VPGRL P+ +F P
Sbjct: 314 INISLFSSYFSNAPVVQVPGRLFPITVFDVAPP 346
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 420 (152.9 bits), Expect = 2.5e-54, Sum P(2) = 2.5e-54
Identities = 129/399 (32%), Positives = 196/399 (49%)
Query: 102 TQEPERDYLEAAIRTVVQIHMCEPSGD--ILVFLTGEEEIEDACRKITKEITNMGDQVGP 159
T PE+ ++ ++ + +C S D ILVFL G ++I +++ E D
Sbjct: 527 TINPEQ--VDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLL-ENPFFADSA-K 582
Query: 160 VKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGF 219
++ L+S +P Q+K+F RKIV++TNIAE+++TID +VYVID G
Sbjct: 583 FDIICLHSMVPAGEQKKVFNRPPPGC-------RKIVLATNIAESAVTIDDVVYVIDSGR 635
Query: 220 AKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPE 279
K+K Y+P V +L S +SKA+A QR GRAGR QPG C+ LY+ + + PE
Sbjct: 636 MKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAAS-MPDFKVPE 694
Query: 280 ILRSNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTE 335
I R + L +K L + + DF+ DPP +++ AL +L +GAL LTE
Sbjct: 695 IKRMPVEELCLQVKILDPNCKTN-DFLQKLLDPPVDQSIANALSILQDIGALTPQEELTE 753
Query: 336 MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPR---EAQKAADEAK 392
+GEK P+ P +SKML + NC + L+++ F P E QKAA AK
Sbjct: 754 LGEKFGHLPVHPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAA-AAK 812
Query: 393 ARFGHI---DGDHLTLLNVYHAYKQ---NNEDPSWCYDNFVNHRALKSADNVRQQLVRIM 446
+ D DHL ++ + +K +C FV+ A+K D +R QL +
Sbjct: 813 LELASLCGGDSDHLAVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESEL 872
Query: 447 ARFNL---KLCSNDFNSRDYYVNIRKAMLAGYFMQVAHL 482
R + + S NSRD + +R + G + V L
Sbjct: 873 KRHGIIPNDISSCSQNSRDPGI-LRAVLAVGLYPMVGRL 910
Score = 184 (69.8 bits), Expect = 2.5e-54, Sum P(2) = 2.5e-54
Identities = 35/95 (36%), Positives = 61/95 (64%)
Query: 13 YLTDGMLLREAMTDPLLERYKVI---VLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 69
+ T+G+LLR + + I ++DE HER +D + +++++L + P L+L++M
Sbjct: 285 FCTNGILLRVLVGKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILM 344
Query: 70 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
SATL+AE+F GYF G P+++VPG +PV Y ++
Sbjct: 345 SATLDAERFSGYFGGCPVVRVPGFTYPVRTLYLED 379
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 461 (167.3 bits), Expect = 3.0e-54, Sum P(2) = 3.0e-54
Identities = 139/471 (29%), Positives = 244/471 (51%)
Query: 104 EPERDYLEAAIRTVVQI-HMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 162
+ E+ L+ + + I H CE +G IL+FL G +EI +I + + +V
Sbjct: 599 DDEKVDLDLIMHLLYNICHSCE-AGAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQV 657
Query: 163 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 222
L+S + + Q+K+ + RKI++STNIAETS+T++ +V+VID G K+
Sbjct: 658 FMLHSNMQTSDQKKVLKNPPAGV-------RKIILSTNIAETSITVNDVVFVIDSGKVKE 710
Query: 223 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 282
K ++ V L + ISKASA QR GRAGR +PG CFRL++ F N L+ QT PE+LR
Sbjct: 711 KSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLR 769
Query: 283 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMR-ALEVLNYLGALDDDGNLTEMG 337
L L K L + DF+ +PP P ++R A+++L + A+D +LTE+G
Sbjct: 770 MPLQELCLHTKLLAPVNCAIADFLMKAPEPP-PALIVRNAVQMLKTIDAMDAWEDLTELG 828
Query: 338 EKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA--QKAADEAKARF 395
+++ P++P + KM++ + C + IL+I+ L+ + FV P +A ++AA + RF
Sbjct: 829 YHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRF 888
Query: 396 -GHIDGDHLTLLNVYHAYKQNNEDP---SWCYDNFVNHRALKSADNVRQQLVR------- 444
DH+ LL + A+++ D ++C NF++ ++ +R QL+
Sbjct: 889 TAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGF 948
Query: 445 IMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNC 504
+ AR + + NS ++ V ++ A++AG + + H++R L + V HP++
Sbjct: 949 VRARGGGDIRDVNTNSENWAV-VKAALVAGMYPHLVHVDRENVVLAGPKEKKVRFHPTSV 1007
Query: 505 LDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLI-DIAPHYYDLSNFPQCEA 554
L +P++ + + + + + +WLI D + ++N C A
Sbjct: 1008 LS-QPQY----KKIPPANGQTAAIQALPTDWLIYDEMTRAHRIANIRCCSA 1053
Score = 143 (55.4 bits), Expect = 3.0e-54, Sum P(2) = 3.0e-54
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 13 YLTDGMLLREAMT-DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+ T+G+LLR M D L +++DE HER +D L L+++L+ P LKL++ SA
Sbjct: 289 FCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSA 348
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEI 99
L+ F YF P++ + GR P E+
Sbjct: 349 ALDVNLFIRYFGSCPVIYIQGR--PFEV 374
>UNIPROTKB|F1RLG0 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS50088
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:CU462841
Ensembl:ENSSSCT00000015529 Uniprot:F1RLG0
Length = 1151
Score = 457 (165.9 bits), Expect = 3.5e-54, Sum P(2) = 3.5e-54
Identities = 139/472 (29%), Positives = 245/472 (51%)
Query: 104 EPERDYLEAAIRTVVQI-HMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQV-GPVK 161
+ E+ L+ + + I H C+ +G +L+FL G +EI +I + D +
Sbjct: 320 DDEKVDLDLIMHLLYNICHSCD-AGAVLIFLPGYDEIVGLRDRILFDDKRFADNTHSRYQ 378
Query: 162 VVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAK 221
V L+S + + Q+K+ + RKI++STNIAETS+T++ +V+VID G K
Sbjct: 379 VFMLHSNMQTSDQKKVLKNPPAGV-------RKIILSTNIAETSITVNDVVFVIDSGKVK 431
Query: 222 QKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEIL 281
+K ++ V L + ISKASA QR GRAGR +PG CFRL++ F N L+ QT PE+L
Sbjct: 432 EKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELL 490
Query: 282 RSNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMR-ALEVLNYLGALDDDGNLTEM 336
R L L K L + DF+ +PP P ++R A+++L + A+D +LTE+
Sbjct: 491 RMPLQELCLHTKLLAPVNCPIADFLMKAPEPP-PALIVRNAVQMLKTIDAMDAWEDLTEL 549
Query: 337 GEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA--QKAADEAKAR 394
G +++ P++P + KM++ + C + IL+I+ L+ + FV P +A ++AA + R
Sbjct: 550 GYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKR 609
Query: 395 F-GHIDGDHLTLLNVYHAYKQNNEDP---SWCYDNFVNHRALKSADNVRQQLVR------ 444
F DH+ LL + A+++ D ++C NF++ ++ +R QL+
Sbjct: 610 FTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASG 669
Query: 445 -IMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSN 503
+ AR + + NS ++ V ++ A++AG + + H++R LT + V HP++
Sbjct: 670 FVRARGGGDIRDVNTNSENWAV-VKAALVAGMYPNLVHVDRENVVLTGPKEKKVRFHPTS 728
Query: 504 CLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLI-DIAPHYYDLSNFPQCEA 554
L +P++ + + + + + +WLI D + ++N C A
Sbjct: 729 VLS-QPQY----KKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSA 775
Score = 143 (55.4 bits), Expect = 3.5e-54, Sum P(2) = 3.5e-54
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 13 YLTDGMLLREAMT-DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+ T+G+LLR M D L +++DE HER +D L L+++L+ P LKL++ SA
Sbjct: 10 FCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSA 69
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEI 99
L+ F YF P++ + GR P E+
Sbjct: 70 ALDVNLFIRYFGSCPVIYIQGR--PFEV 95
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 422 (153.6 bits), Expect = 3.7e-54, Sum P(3) = 3.7e-54
Identities = 112/351 (31%), Positives = 186/351 (52%)
Query: 108 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 167
+ +EA + +V P G ILVFL G EI+ ++ + + PL+S
Sbjct: 153 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHS 212
Query: 168 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 227
+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y+
Sbjct: 213 SLSSEEQQAVFVKPPAGVT-------KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 265
Query: 228 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 287
+ESL + +S+A+A QR GRAGR G CF L+T +N+ L Q PEI R L
Sbjct: 266 SKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQ 325
Query: 288 TVLTLKKLGI---DDL--VHFDFMDPPAPETLMRALEV-LNYLGALDDDGNLTEMGEKMS 341
L +K L + +L V ++PP ++L RA ++ L LGAL D LT +G ++
Sbjct: 326 LCLRIKILEMFSAHNLQSVFSRLIEPPHTDSL-RASKIRLRDLGALTPDERLTPLGYHLA 384
Query: 342 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGD 401
P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A++ K F + D
Sbjct: 385 SLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSD 444
Query: 402 HLTLLNVYHAYKQNNEDP-----SWCYDNFVNHRALKSADNVRQQLVRIMA 447
+L LL Y ++ + ++ ++C NF++ R L+ ++++Q +++
Sbjct: 445 YLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLS 495
Score = 136 (52.9 bits), Expect = 3.7e-54, Sum P(3) = 3.7e-54
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 48 DVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
D L +LK+++ RP L++++MSATL AE F YF P++ +PGR PV+ F+ ++
Sbjct: 2 DFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLED 58
Score = 43 (20.2 bits), Expect = 3.7e-54, Sum P(3) = 3.7e-54
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 511 WVIYNEYVLTSRNFIR 526
+++Y+E + TSR FIR
Sbjct: 559 YLLYHEKIKTSRVFIR 574
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 408 (148.7 bits), Expect = 1.2e-53, Sum P(3) = 1.2e-53
Identities = 108/323 (33%), Positives = 178/323 (55%)
Query: 129 ILVFLTGEEEIEDACRKITKEITNMGD-QVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXX 187
ILVFL G EI R++ E+ + Q G + + L+S++ Q+K F
Sbjct: 922 ILVFLPGMAEI----RRLNDELLSEPTFQHGWI-IHALHSSIASDEQEKAF-------VV 969
Query: 188 XXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQR 247
RKIV++TNIAET +TI I VID G K ++ R ++ L+ + IS+A+A QR
Sbjct: 970 PPDGMRKIVIATNIAETGITIPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQR 1029
Query: 248 SGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK--KLGIDDLVHFDF 305
GRAGR Q G CF ++T+ +N L Q PE+LR +L + VL +K KLG + +
Sbjct: 1030 RGRAGRVQRGICFHMFTKHRHDNLLAEQQTPEMLRLSLQDLVLRVKICKLGEVEPTLLEA 1089
Query: 306 MDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEI 365
+DPP+ + + RA++ L + AL NLT +G+++++ PLD + K+++ + C +
Sbjct: 1090 LDPPSSKNIRRAIDALKEVKALTSTENLTPLGQQLAKLPLDVFLGKLIIHGAFFKCLDAA 1149
Query: 366 LSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP-----S 420
+SI+A+LS + FV + + + F D D LT+ N Y A+K+ P +
Sbjct: 1150 ISIAAILSCKSPFVNTMGSNAQKEAVRLGFRRGDSDLLTVYNAYCAWKRTRSTPGANEYA 1209
Query: 421 WCYDNFVNHRALKSADNVRQQLV 443
+C NF++ + L + ++V+ QL+
Sbjct: 1210 FCRKNFLSPQTLLNIEDVKLQLM 1232
Score = 176 (67.0 bits), Expect = 1.2e-53, Sum P(3) = 1.2e-53
Identities = 33/92 (35%), Positives = 58/92 (63%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+ T G+++R + +VLDE HER++ +D L +L+ +++ R DLKL++MSAT
Sbjct: 748 FATTGVVVRMLERPDDFQDITHVVLDEVHERSIDSDFLLIVLRRLMQKRQDLKLILMSAT 807
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
++A +F Y G P++ +PGR PVE + ++
Sbjct: 808 VDANRFSTYLGGVPVLNIPGRTFPVETKFLED 839
Score = 40 (19.1 bits), Expect = 1.2e-53, Sum P(3) = 1.2e-53
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 482 LERTGQ-YLTVKDNQVVHLHPSN 503
L R G+ + + +NQ V LHP++
Sbjct: 1292 LTREGKGWRNIANNQSVTLHPTS 1314
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 419 (152.6 bits), Expect = 5.2e-53, Sum P(3) = 5.2e-53
Identities = 97/272 (35%), Positives = 154/272 (56%)
Query: 123 CEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXX 182
CE G IL+FL G EI + G ++PL+S++ + Q+K+F
Sbjct: 913 CE-EGAILIFLPGVAEIYMLLDMLAASYRFRGPAAD--WLLPLHSSIASSEQRKVF---- 965
Query: 183 XXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKA 242
RK++ +TNIAETS+TID +VYVID G K+ YNP+ ++ S++ IS+A
Sbjct: 966 ---LRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQA 1022
Query: 243 SAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVH 302
+A QR+GRAGR +PG CF LYT F ++P PE+LR L L +K LG+ +
Sbjct: 1023 NARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKP 1082
Query: 303 F--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYN 360
F ++PP+ + A+ +L+ +GA++ D LT +G +++ P+D + KML+ +
Sbjct: 1083 FLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFG 1142
Query: 361 CSNEILSISAMLSVPNCFVRPREAQKAADEAK 392
C + ILSI+A LS + F+ P++ ++ D K
Sbjct: 1143 CLSPILSIAAFLSYKSPFIYPKDEKQNVDRVK 1174
Score = 155 (59.6 bits), Expect = 5.2e-53, Sum P(3) = 5.2e-53
Identities = 36/98 (36%), Positives = 57/98 (58%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRP-D-----LKL 66
+ T G+LLR+ D L I++DE HER+L D L +LK +++ + D LK+
Sbjct: 717 FCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKV 776
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
++MSAT++A+ F YF P++ GR HPV + +E
Sbjct: 777 ILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEE 814
Score = 44 (20.5 bits), Expect = 5.2e-53, Sum P(3) = 5.2e-53
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 497 VHLHPS----NCLDHKPEWVIYNEYVLTSRNFIRTVTDV 531
VH+HPS N + ++++ E V T++ ++R T V
Sbjct: 1337 VHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIV 1375
>RGD|1307239 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10116 "Rattus norvegicus" [GO:0000182 "rDNA binding"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=ISO] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 RGD:1307239 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 IPI:IPI00952339
Ensembl:ENSRNOT00000068255 UCSC:RGD:1307239 Uniprot:D3ZWE8
Length = 475
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 117/318 (36%), Positives = 181/318 (56%)
Query: 231 VESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVL 290
+E L V +SK A QR+GRAGR G C+RLYTE F+ + PEI R NLA+ +L
Sbjct: 154 LEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFDK-FEKMAAPEIQRCNLASVML 212
Query: 291 TLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFPLDP 347
L + + +++ FDFM P+P+ + A+ L+ LGAL DD LT +G KM+ FPL+P
Sbjct: 213 QLLAMKVPNVLTFDFMSRPSPDHIEAAIAQLDLLGALEHKDDQLALTPIGRKMAAFPLEP 272
Query: 348 QMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLN 407
+ +K ++ S K++C+ EIL+I ++LSV + P + + +F +GDH+TLLN
Sbjct: 273 KFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHITLLN 332
Query: 408 VYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNI 467
+Y +K + WC +NFVN + + VR QL I + ++ + S SR ++
Sbjct: 333 IYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLRDICLKMSMPIMS----SRGDMESV 388
Query: 468 RKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIR 526
R+ + FM A L+ G Y T +Q V +HPS+ L H KP V+Y + T++ ++R
Sbjct: 389 RRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCYMR 448
Query: 527 TVTDVRGEWLIDIAPHYY 544
+ V EWL + AP Y+
Sbjct: 449 DLCVVDAEWLYEAAPDYF 466
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 438 (159.2 bits), Expect = 2.0e-52, Sum P(2) = 2.0e-52
Identities = 128/406 (31%), Positives = 218/406 (53%)
Query: 104 EPERDYLEAAIRTVVQI-HMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 162
+ E+ L+ + + I H C+ +G IL+FL G +EI +I + D +V
Sbjct: 599 DDEKVDLDLIMHLLYNICHGCD-AGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQV 657
Query: 163 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 222
L+S + + Q+K+ + RKI++STNIAETS+T++ +V+VID G K+
Sbjct: 658 FMLHSNMQTSDQKKVLKNPPAGV-------RKIILSTNIAETSITVNDVVFVIDSGKVKE 710
Query: 223 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 282
K ++ V L + ISKASA QR GRAGR +PG CFRL++ F N L+ QT PE+LR
Sbjct: 711 KSFDALNFVTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLR 769
Query: 283 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMR-ALEVLNYLGALDDDGNLTEMG 337
L L K L + DF+ +PP P ++R A+++L + A+D +LTE+G
Sbjct: 770 MPLQELCLHTKLLAPVNCPIADFLMKAPEPP-PALIVRNAVQMLKTIDAMDAWEDLTELG 828
Query: 338 EKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA--QKAADEAKARF 395
+++ P++P + KM++ + C + IL+I+ L+ + FV P +A ++AA + RF
Sbjct: 829 YHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRF 888
Query: 396 -GHIDGDHLTLLNVYHAYKQNNEDP---SWCYDNFVNHRALKSADNVRQQLVR------- 444
DH+ LL + A+++ D ++C NF++ ++ +R QL+
Sbjct: 889 TAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGF 948
Query: 445 IMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+ AR + + NS ++ V ++ A++AG + + H++R LT
Sbjct: 949 VRARGGGDIRDVNTNSENWAV-VKAALVAGMYPNLVHVDRENVVLT 993
Score = 143 (55.4 bits), Expect = 2.0e-52, Sum P(2) = 2.0e-52
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 13 YLTDGMLLREAMT-DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+ T+G+LLR M D L +++DE HER +D L L+++L+ P LKL++ SA
Sbjct: 289 FCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSA 348
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEI 99
L+ F YF P++ + GR P E+
Sbjct: 349 ALDVNLFIRYFGSCPVIYIQGR--PFEV 374
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 427 (155.4 bits), Expect = 1.5e-51, Sum P(2) = 1.5e-51
Identities = 136/454 (29%), Positives = 221/454 (48%)
Query: 121 HMCEPS--GDILVFLTGEEEIEDACRKITKEITNMGDQV-GPVKVVPLYSTLPPAMQQKI 177
++C S G IL+FL G +EI +I + D +V L+S + Q+ +
Sbjct: 525 NICNSSDGGAILIFLPGYDEIISLRDRIIFDDKRFVDNAHSKYQVFMLHSNMQTLDQKNV 584
Query: 178 FEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVS 237
+ RKI++STNIAETS+T++ +V+VID G K+K ++ V L
Sbjct: 585 LKTPPSGI-------RKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTV 637
Query: 238 PISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGI 297
ISKASA QR GRAGR +PG CF L++ F N L+ QT PE+ R L L K L
Sbjct: 638 WISKASAIQRRGRAGRCRPGVCFHLFSRLRFQNMLEFQT-PELRRMPLQELCLHTKLLAP 696
Query: 298 DDLVHFDFM----DPPAPETLMR-ALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKM 352
+ DF+ DPP P ++R A+++L + A+D +LTE+G ++E P++P + KM
Sbjct: 697 VNCPVVDFLMKAPDPP-PALIVRNAIQMLKKIDAMDVWEDLTELGYHLAELPVEPHLGKM 755
Query: 353 LVESPKYNCSNEILSISAMLSVPNCFVRPREA--QKAADEAKARFGH-IDGDHLTLLNVY 409
++ + C + IL+I+ L+ + FV P A ++AA + R DH+ LL +
Sbjct: 756 VLCAVVLKCLDPILTIACTLAYRDPFVLPTVASQKRAAMLCRKRLAAGTFSDHMVLLRAF 815
Query: 410 HAYKQNNEDPSW----CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYV 465
A+++ D W C NF++ ++ +R QL+ + + RD V
Sbjct: 816 QAWQKARSD-GWERVFCEKNFLSQATMEIIIGMRTQLLGQLRALGFVRARGGADIRDVNV 874
Query: 466 N------IRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVL 519
N ++ A++AG + + H++R LT + V HP++ L Y + +
Sbjct: 875 NSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPTSVLSQAQ----YKK-IP 929
Query: 520 TSRNFIRTVTDVRGEWLI-DIAPHYYDLSNFPQC 552
S V + +WLI D + ++N C
Sbjct: 930 PSNGQAAAVQALPTDWLIYDEMTRAHRIANIRCC 963
Score = 151 (58.2 bits), Expect = 1.5e-51, Sum P(2) = 1.5e-51
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 13 YLTDGMLLREAMT-DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+ T+G+LLR M D L +++DE HER +D L L+++L+N+ +LKL++ SA
Sbjct: 200 FCTNGILLRTLMAGDSALSTVTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSA 259
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEI 99
L+A F YF P++ + GR P E+
Sbjct: 260 ALDANLFIKYFGSCPVIHIQGR--PFEV 285
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 408 (148.7 bits), Expect = 1.5e-51, Sum P(2) = 1.5e-51
Identities = 100/273 (36%), Positives = 152/273 (55%)
Query: 123 CEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXX 182
CE G ILVFL G EI ++ G G ++PL+S++ Q+K+F
Sbjct: 880 CE-EGAILVFLPGMSEINMLLNRLAASYRFRGAS-GDW-LLPLHSSIASTEQKKVF---- 932
Query: 183 XXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKA 242
RK++++TNIAETS+TI+ +VYVID G K+ YNP ++ S++ +SKA
Sbjct: 933 ---LRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKA 989
Query: 243 SAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVH 302
+A QR GRAGR +PG CF LYT F ++P PE+LR L L +K LG+ +
Sbjct: 990 NARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKP 1049
Query: 303 F--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYN 360
F ++PP+ + A+ +L+ +GAL+ D LT +G +++ P+D + KML+ +
Sbjct: 1050 FLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFG 1109
Query: 361 CSNEILSISAMLSV-PNCFVRPREAQKAADEAK 392
C + ILSI+A LS + FV ++ Q D K
Sbjct: 1110 CLSPILSIAAFLSCCKSPFVYAKDEQNV-DRVK 1141
Score = 171 (65.3 bits), Expect = 1.5e-51, Sum P(2) = 1.5e-51
Identities = 40/109 (36%), Positives = 66/109 (60%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNR------PDLKL 66
+ T G+LLR+ + D L+ I++DE HER+L D L +LK +++ + P LK+
Sbjct: 697 FCTTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKV 756
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEP-ERD-YLEAA 113
++MSAT++A +F YF P++ GR HPV ++ ++ ER YL A+
Sbjct: 757 ILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLAS 805
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 434 (157.8 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 129/413 (31%), Positives = 220/413 (53%)
Query: 104 EPERDYLEAAIRTVVQI-HMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 162
+ E+ L+ + + I H C IL+FL G +EI +I + D +V
Sbjct: 600 DDEKVDLDLIMHLLYNICHGCHKCA-ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQV 658
Query: 163 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 222
L+S + + Q+K+ + RKI++STNIAETS+T++ +V+VID G K+
Sbjct: 659 FMLHSNMQTSDQKKVLKNPPAGV-------RKIILSTNIAETSITVNDVVFVIDSGKVKE 711
Query: 223 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 282
K ++ V L + ISKASA QR GRAGR +PG CFRL++ F N L+ QT PE+LR
Sbjct: 712 KSFDALNFVTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLR 770
Query: 283 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMR-ALEVLNYLGALDDDGNLTEMG 337
L L K L + DF+ +PP P ++R A+++L + A+D +LTE+G
Sbjct: 771 MPLQELCLHTKLLAPVNCPIADFLMKAPEPP-PALIVRNAVQMLKTIDAMDAWEDLTELG 829
Query: 338 EKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA--QKAADEAKARF 395
+++ P++P + KM++ + C + IL+I+ L+ + FV P +A ++AA + RF
Sbjct: 830 YHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRF 889
Query: 396 -GHIDGDHLTLLNVYHAYKQNNEDP---SWCYDNFVNHRALKSADNVRQQLVR------- 444
DH+ LL + A+++ D ++C NF++ ++ +R QL+
Sbjct: 890 TAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGF 949
Query: 445 IMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT-VKDNQV 496
+ AR + + NS ++ V ++ A++AG + + H++R LT KD+++
Sbjct: 950 VRARGGGDIRDVNTNSENWAV-VKAALVAGMYPNLVHVDRENVVLTGPKDSRI 1001
Score = 143 (55.4 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 13 YLTDGMLLREAMT-DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+ T+G+LLR M D L +++DE HER +D L L+++L+ P LKL++ SA
Sbjct: 290 FCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSA 349
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEI 99
L+ F YF P++ + GR P E+
Sbjct: 350 ALDVNLFIRYFGSCPVIYIQGR--PFEV 375
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 414 (150.8 bits), Expect = 1.2e-50, Sum P(2) = 1.2e-50
Identities = 111/344 (32%), Positives = 176/344 (51%)
Query: 119 QIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIF 178
++ + + SG IL+FL G EI AC M + + V+PL+++L Q+K+F
Sbjct: 880 ELSLAQKSGGILIFLPGVAEINRAC--------GMLRSLNCLHVLPLHASLETKEQRKVF 931
Query: 179 EXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 238
RK+VV+TN+AETS+TID I+ V+D G K+ Y+ + L +
Sbjct: 932 -------VPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETF 984
Query: 239 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGID 298
S A+ QR GRAGR Q G+C++LYT K + + + PE+ R L L+++ +GI
Sbjct: 985 ASLAACKQRRGRAGRVQAGECYKLYTRK-LESQMAERPEPEMRRVPLEQLCLSVRAMGIA 1043
Query: 299 DLVHFDFMDPPAPET--LMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVES 356
D+ F P PE + A+ +L +G LD + LT +G +++ P D + K++V
Sbjct: 1044 DVRGFLARAPTPPEAAAVEGAITMLRRMGCLDGE-ELTALGRQLAAIPADLRCGKLMVYG 1102
Query: 357 PKYNCSNEILSISAMLSVPN-CFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN 415
+ C + +S++A+LS FV P + + A EA+ARF DGD LT L + A+
Sbjct: 1103 AVFGCLEDCVSVAALLSSGRGVFVSPPDKRDQAREARARFAAGDGDLLTDLRAFQAWDAM 1162
Query: 416 NEDPS--------WCYDNFVNHRALKSADNVRQQLVRIMARFNL 451
DPS +C DNF+++ L + R Q + L
Sbjct: 1163 MRDPSVQQRHVRSFCDDNFLSYLTLSDVASARTQYFTSLVELGL 1206
Score = 156 (60.0 bits), Expect = 1.2e-50, Sum P(2) = 1.2e-50
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 35 IVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY--GAPL--MKV 90
+V+DE HER+L TD L ++++VLK R DLKLV+MSATL++ F YF G + +++
Sbjct: 762 VVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFASYFVQDGIRVGQVEI 821
Query: 91 PGRLHPVEIFYTQE 104
GR PV +Y +
Sbjct: 822 AGRTFPVTDYYLDD 835
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 388 (141.6 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 108/327 (33%), Positives = 180/327 (55%)
Query: 129 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXX 188
+LVFL G EI + + +++ + + L+STL A QQ +F
Sbjct: 906 VLVFLPGISEILRV-KSLIEDMPMFRNH-RKFCIYMLHSTLSSAQQQSVFNIPPKGC--- 960
Query: 189 XXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 248
RKIV+STNIAET +TI + VID G ++ YN R + L + +SKA+A QRS
Sbjct: 961 ----RKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRS 1016
Query: 249 GRAGRTQPGKCFRLYTEKSFNNDLQPQTY--PEILRSNLANTVLTLKKLGIDDL--VHFD 304
GRAGR Q G C+ L+++ F +D Q +Y PEILR NL VL +K + D+ V
Sbjct: 1017 GRAGRVQEGICYHLFSK--FKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVLGK 1074
Query: 305 FMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNE 364
+DPP+ ++RALE L+ +GAL ++ LT++G+ +S+ P+D + K+LV Y C +
Sbjct: 1075 ALDPPSSTNIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDA 1134
Query: 365 ILSISAMLSVPNCFVRPREAQKAADEAKARFG--HIDGDHLTLLNVYHAYKQ------NN 416
SI AML++ + F + + + +A++A+ F + D + + Y A+++
Sbjct: 1135 ASSIVAMLTIGSPFRKSVDNEFSANKARLSFAKENTRSDLVLMYYAYCAWREICLSPLGP 1194
Query: 417 EDPSWCYDNFVNHRALKSADNVRQQLV 443
++ S+ + ++N AL ++++ QL+
Sbjct: 1195 DEDSFAKEKYLNLEALSMTESLKIQLL 1221
Score = 195 (73.7 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 38/92 (41%), Positives = 59/92 (64%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y+T G LR +E +++DE HER++ +D+L + +LK P LK+++MSAT
Sbjct: 733 YVTTGTFLRLLEVGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSAT 792
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
L AEKFQ YF G+ L+ +PG+ +PV FY ++
Sbjct: 793 LNAEKFQLYFEGSNLITIPGKTYPVHRFYLED 824
Score = 37 (18.1 bits), Expect = 5.2e-33, Sum P(2) = 5.2e-33
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 59 KNRPDLKLVVMSATLEAE 76
K DLK V+ +ATL A+
Sbjct: 499 KTFSDLKTVLPTATLAAD 516
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 519 (187.8 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 143/435 (32%), Positives = 224/435 (51%)
Query: 14 LTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKN-RPDLKLVVMSAT 72
+T+G+L R +DPLLE ++ DE HER++ +D+ L ++V R DL+++VMSAT
Sbjct: 100 VTEGILTRRLQSDPLLEGVGAVIFDEFHERSIHSDLALALCRDVQAGLREDLRIIVMSAT 159
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVF 132
+ A AP++ GR +PV + + +R+ L +A+ V+I + E GDIL F
Sbjct: 160 MAAAPVAALLGDAPVITSEGRNYPVALRHIPPNDRENLPSAVARAVRIAVRECEGDILAF 219
Query: 133 LTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 192
L G EI C ++ + + P+ VVPLY LP Q++
Sbjct: 220 LPGVGEIR-RCGQLLADDPPLH---APL-VVPLYGDLPFVEQERAI--------LPVPGR 266
Query: 193 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 252
RK+V++T IAETSLTI+G+ V+D G ++ Y+P + L+ +S ASA QR+GRAG
Sbjct: 267 RKVVLATTIAETSLTIEGVRVVVDGGQTRRLRYDPASGLNRLVTERVSAASATQRAGRAG 326
Query: 253 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 312
R PG C+RL+ E L PEIL ++LA L L G+ D ++DPP
Sbjct: 327 RLGPGTCYRLWPEHD-QQALLAADPPEILIADLAPLALDLAHWGVSDPASLAWLDPPPRG 385
Query: 313 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 372
L A +L L ALD G +TE G +M+E PL P+++ ML+ + + + ++A+L
Sbjct: 386 ALEEARNLLKSLDALDGQGMITETGRRMAELPLHPRLAHMLLRATERGPAPLACDVAALL 445
Query: 373 SVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRAL 432
+ + VR +AA+ A D L + ++Q D+ V+ A
Sbjct: 446 TERD-IVRSAGTGQAAERAGC-------DMLIRVEALEQWRQGRGGR----DHQVDSSAC 493
Query: 433 KSADNVRQQLVRIMA 447
++ D V L R++A
Sbjct: 494 RAVDRVASHLRRLIA 508
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 389 (142.0 bits), Expect = 1.6e-48, Sum P(3) = 1.6e-48
Identities = 112/373 (30%), Positives = 200/373 (53%)
Query: 93 RLHPVEIFYTQEP-ERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEIT 151
+L+ ++I Q+ D +E+ I +V + + ILVF+ G +I + C ++ K I+
Sbjct: 864 KLNQLKISIDQKRINLDVVESLILHLVN-GVLKKDKSILVFVPGLSDILELCSRLGKPIS 922
Query: 152 NMGDQVGP-VKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDG 210
+ + + VPL+S+L P QQK+FE K+V++TNIAETS+TI+
Sbjct: 923 TFTEAICQRIWCVPLHSSLSPKDQQKVFEKAPNGRV-------KVVIATNIAETSITIED 975
Query: 211 IVYVIDPGFAKQKVYNPRVRVESLLVSP-ISKASAHQRSGRAGRTQPGKCFRLYTEKSFN 269
+ V+D G Q +N + S++ SKAS QR+GRAGRT G CF+++T KS
Sbjct: 976 VEIVVDCGRVNQMTFNS-ITGNSVMSEEWTSKASCRQRAGRAGRTSSGLCFKVFT-KSME 1033
Query: 270 NDLQPQTYPEILRSNLANTVLTLK---KLGIDDLVHFDFM----DPPAPETLMRALEVLN 322
+ LQ Q PEILR++L L +K K + + DF+ +PP+ E + ++ L
Sbjct: 1034 SQLQDQDTPEILRTSLQQLCLHVKLFLKNNKNTTIQ-DFLNRAIEPPSSEQIQSSINELI 1092
Query: 323 YLGAL----DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCF 378
+ AL LT +G ++ P+D + KML+ + C + IL+I+A L+ + F
Sbjct: 1093 SIDALKINQQQQQELTPLGYHLASLPVDVYIGKMLLFGCIFRCLDPILTIAATLNYKSPF 1152
Query: 379 VRPREAQ-KAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS---WCYDNFVNHRALKS 434
+ P + + D+ + DH TL+N Y++++++ +D + +C +N+++ L++
Sbjct: 1153 LNPPDKTIRPMDKFSSPN---QSDHQTLINAYNSWRKSIQDGNEYQFCRENYLSIPTLRT 1209
Query: 435 ADNVRQQLVRIMA 447
+++ Q V I++
Sbjct: 1210 IQDLKLQFVEILS 1222
Score = 155 (59.6 bits), Expect = 1.6e-48, Sum P(3) = 1.6e-48
Identities = 33/94 (35%), Positives = 52/94 (55%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+ T G+LLR + + I++DE HER+ D L +L+E++ R DLK+++MSAT
Sbjct: 729 FCTTGILLRRILDVSNISDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSAT 788
Query: 73 LEAEKFQGYFYGAP--LMKVPGRLHPVEIFYTQE 104
L A++ YF + +PG PV+ Y E
Sbjct: 789 LNAKQIANYFKCTDDSIFSIPGFTFPVKNIYINE 822
Score = 63 (27.2 bits), Expect = 1.6e-48, Sum P(3) = 1.6e-48
Identities = 29/126 (23%), Positives = 56/126 (44%)
Query: 413 KQNNEDPSWCYDNFVNHRALKSADNVRQQLVR--IMARFNLKLCSNDFNSRDYYVNIRKA 470
K NN C D FV + + ++++ + +++ + A K+ D+ Y A
Sbjct: 1246 KGNNYSND-CIDEFVGY--IYNSNSSKSKIITSVLCAGMYPKIARIDYPDAKYSQTASGA 1302
Query: 471 MLAGYFMQ-VAHLERTGQYLTVKDNQVVHLHPSNCLDHKPEWV----IYNEYVLTSRNFI 525
+ Y + + L + K + V +HP + + EWV IYN+ V TS+ F+
Sbjct: 1303 IKNKYSPESLLLLTKPPNCGPGKPLERVFIHPRSTNFKEGEWVYPFIIYNDKVKTSKLFL 1362
Query: 526 RTVTDV 531
+T++
Sbjct: 1363 HHITNL 1368
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 314 (115.6 bits), Expect = 1.9e-48, Sum P(3) = 1.9e-48
Identities = 85/258 (32%), Positives = 130/258 (50%)
Query: 124 EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXX 183
E D F G+ ++ D K+ I P+ +PLYS L Q+++F+
Sbjct: 541 EAFDDYEEFENGDGDLSDG--KVENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPA 598
Query: 184 XXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 243
R V+STN+AETSLTI G+ YVID GF K+++Y+ V V IS+AS
Sbjct: 599 GM-------RLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQAS 651
Query: 244 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 303
QR+GRAGR G +RLY+ + D PEIL VL LK + I +V+F
Sbjct: 652 GDQRAGRAGRISAGHAYRLYSSAVYQ-DFVKFADPEILSKPADQLVLHLKSMNIVKVVNF 710
Query: 304 DFMDPPAPETLMRALEVLNYLGALDD-------DGNLTEMGEKMSEFPLDPQMSKMLVES 356
F P + L A + L LGAL + + +T++G+ ++ FPL P +K + +
Sbjct: 711 PFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMA 770
Query: 357 PKYNCSNEILSISAMLSV 374
++N + + + ++LSV
Sbjct: 771 DQHNLMSHAILLISLLSV 788
Score = 249 (92.7 bits), Expect = 1.9e-48, Sum P(3) = 1.9e-48
Identities = 59/160 (36%), Positives = 94/160 (58%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL----KNRPDLKLVV 68
++TDG+L++E D +L++Y VI++DEAHER++ +DVL G+L ++ K L+LV+
Sbjct: 330 FMTDGVLMKEMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVI 389
Query: 69 MSATLEAEKF--QGYF-YGAP-LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCE 124
MSATL + F + F P ++KV R PV + + + DY+ +A R +IH
Sbjct: 390 MSATLRLDDFTHKKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCRIHETL 449
Query: 125 PSGDILVFLTGEEEIEDACRKITKE--ITNMGDQVGPVKV 162
P G ILVF+TG+ E++ K+ K + D+ G V V
Sbjct: 450 PPGAILVFVTGQHEVKQLITKLKKRYPVVYETDKNGEVLV 489
Score = 67 (28.6 bits), Expect = 1.9e-48, Sum P(3) = 1.9e-48
Identities = 38/161 (23%), Positives = 69/161 (42%)
Query: 400 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIM----ARFNLKLCS 455
GD L++ +Q + C + +AL A +RQQL I+ + +
Sbjct: 830 GDLKVLMHAASVAEQIKYNARECEKVGLRVKALVEARKLRQQLTNIVNASCKKEHAAALD 889
Query: 456 NDFNS-RDYYVNI-RKAMLAGYFMQVAH-LERT--------GQYLTVKDNQVVHLHPSNC 504
+D D + R+ ++A + ++A ++R+ G Y T V + P +
Sbjct: 890 SDLPPPTDQQAQLLRQMVVASFSDRLARRVDRSVGQEEVQKGAYETTLIKGHVFIDPCSV 949
Query: 505 L-DHKPEWVIYNEYV-LTSRNFIRTVTDVRGEWLIDIAPHY 543
+ +PE+VIY E V + + + +V V EWL +A Y
Sbjct: 950 VFTEEPEFVIYQELVQVNEKKLMTSVCAVDKEWLSRLAESY 990
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 390 (142.3 bits), Expect = 7.0e-48, Sum P(2) = 7.0e-48
Identities = 117/396 (29%), Positives = 194/396 (48%)
Query: 102 TQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVK 161
T +PE + ++ + +I G ILVFL G EEI K+ +
Sbjct: 551 TIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDD--RFFAHSAKFI 608
Query: 162 VVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAK 221
++ L+S +P Q+K+F RKIV++TNIAE+++TID +VYVID G K
Sbjct: 609 ILCLHSRVPAEEQKKVFNRPPRGC-------RKIVLATNIAESAVTIDDVVYVIDSGRMK 661
Query: 222 QKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEIL 281
+K Y+P V +L S +SKA+A QR+GRAGR Q G C+ LY+ K L PE++
Sbjct: 662 EKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYS-KLRAASLPEYRVPEVM 720
Query: 282 RSNLANTVLTLKKL----GIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMG 337
R + L +K L ++D + MDPP +++ AL +L +GAL + LTE+G
Sbjct: 721 RMPVDELCLQVKMLDPNCNVNDFLQ-KLMDPPVAQSIENALIILKDIGALTPEEELTELG 779
Query: 338 EKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA--QKAADEAKARF 395
+K + P+ P++SKM+ + NC + L ++ + F P +K A AK
Sbjct: 780 QKFGQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHEL 839
Query: 396 GHIDGDH---LTLLNVYHAYKQ---NNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARF 449
+ GDH L + + +K + + +C F++ +K D++ ++L + R
Sbjct: 840 ASLYGDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRH 899
Query: 450 NL--KLCSN-DFNSRDYYVNIRKAMLAGYFMQVAHL 482
+ SN N+ D + +R + G + + +
Sbjct: 900 GVIPSSSSNCSLNAHDPGI-LRAVIAVGLYPMLGRM 934
Score = 176 (67.0 bits), Expect = 7.0e-48, Sum P(2) = 7.0e-48
Identities = 35/95 (36%), Positives = 61/95 (64%)
Query: 13 YLTDGMLLREAM---TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 69
+ T+G+LLR + + + I++DE HER +D + +L+++L + P L+L++M
Sbjct: 315 FCTNGILLRVLIGKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILM 374
Query: 70 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
SATL+AE+F YF G P+++VPG +PV F+ +
Sbjct: 375 SATLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDD 409
Score = 37 (18.1 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 20/77 (25%), Positives = 31/77 (40%)
Query: 235 LVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKK 294
+ S +S S Q S + QP + S +D+ P T P LR + NT K
Sbjct: 1109 IASVLSYDSLAQSSVQTVAVQP--ITSVVDATSPRDDI-PSTNPNELREHDPNTTPMGSK 1165
Query: 295 LGIDDLVHFDFMDPPAP 311
L + + + M+ P
Sbjct: 1166 LELANKLGLGNMEESLP 1182
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 287 (106.1 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 85/274 (31%), Positives = 140/274 (51%)
Query: 99 IFYTQEPERDYLEAAIRTVVQIHMCEPS-GDILVFLTGEEEIEDACRKIT---KEITNMG 154
+FY + V+Q P G ILVFL G E+I+ + I + NM
Sbjct: 616 LFYGSSSNNSVDYVLLDQVIQYLADSPVFGTILVFLPGYEDIQQMLKAIDCWKNSLKNMK 675
Query: 155 DQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYV 214
+ + V+PL+S + IF+ RKI+++TNIAE S+TI+ +++V
Sbjct: 676 NVI----VLPLHSQMTSINHGDIFKSVPKDT-------RKIILATNIAEASITIEDVIFV 724
Query: 215 IDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQP 274
+D G K+K ++ ++ +L V PI++++A QRSGRAGR G C RLYTE+ +N+ P
Sbjct: 725 VDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGRAGRVANGYCIRLYTEQEYNS--MP 782
Query: 275 QTY-PEILRSNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGAL-- 327
+T E+ R+ + + L K L +F+ +PP E++++A+ L +GA
Sbjct: 783 ETQIAEMKRAAIYDVTLHAKLFAPKTLKISEFLSLAPEPPEKESILQAITFLEQIGAFYT 842
Query: 328 -----DDDGN---LTEMGE-KMSEFPLDPQMSKM 352
D+ GN L E + SE P DP+++ +
Sbjct: 843 PIKIYDNSGNEEGLKNDEEAENSENPEDPELTDL 876
Score = 180 (68.4 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
Y T G+LLR +DP+ IV+DE HER + TD L L+E LK RPDLK+++MSAT
Sbjct: 278 YCTTGVLLRMLTSDPVASGITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSAT 337
Query: 73 LEA--EKFQGYF--YGAPLMKVPGRLHPVEIFYTQE 104
+E + F YF + ++++ R V++FY +
Sbjct: 338 IEGNMQLFSNYFENHSMDVIRIESRAFDVKVFYLDQ 373
Score = 153 (58.9 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 36/127 (28%), Positives = 65/127 (51%)
Query: 329 DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRP-REAQKA 387
+D LT++G M+ PLDPQ+S+ML+ C I+++ A+L+ +V E +
Sbjct: 869 EDPELTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSEDRDL 928
Query: 388 ADEAKARFGHID-GDHLTLLNVYHAY--KQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 444
+ K D DHL + + + + K N++ +C D+F+N ++ R+QL+R
Sbjct: 929 QSKMKFEMAQQDLSDHLLYIRLCNEFCSKNNSQQNQFCRDHFLNFSTMRMVQGTRRQLLR 988
Query: 445 IMARFNL 451
+ R L
Sbjct: 989 ELVRAKL 995
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 88/168 (52%), Positives = 127/168 (75%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY+TDGMLLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SA
Sbjct: 494 RYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASA 553
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++ +F +F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILV
Sbjct: 554 TMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILV 613
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFE 179
FLTG+EEIE AC + +G ++ + V+P+Y+ LP MQ +IF+
Sbjct: 614 FLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQ 661
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 398 (145.2 bits), Expect = 1.5e-46, Sum P(2) = 1.5e-46
Identities = 116/385 (30%), Positives = 204/385 (52%)
Query: 15 TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLE 74
T G+LL+ +D L + +DE HER + TD L +LK++L + +L++++MSAT++
Sbjct: 819 TPGILLKRMYSDMKLHNVSHLFIDEVHERDIHTDFLLIILKKLLADNNNLRVILMSATMD 878
Query: 75 AEKFQGYFYGAPLMKVPGRLHPVEIFYTQE-------PERDYL---------EAAIRTVV 118
YF P++K+ H + ++ ++ P Y E ++ +V
Sbjct: 879 NSLVSAYFGTCPVIKLTSYHHIAQEYFLEDISKQLNDPTISYRDEQSDDVDHEMILQLIV 938
Query: 119 QI--HMCEPSGD-ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQ 175
I + S D IL+FL G E+I R++ + + ++ ++PL+S++ +Q
Sbjct: 939 HIVTKVSSTSEDSILIFLPGWEDISQT-RELMRRHPMLRNE-NEFLILPLHSSVSMQLQA 996
Query: 176 KIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLL 235
K+FE RKIV+STNIAETS+TI+ +VYVID K K Y+ R +L
Sbjct: 997 KVFEKPPPKI-------RKIVLSTNIAETSITINDVVYVIDSAKVKLK-YHETQRDLTLF 1048
Query: 236 VSPIS-KASAHQRSGRAGRTQP-GKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 293
+ + K+S QR GRAGR + G C+ + + +N L+ E+ R L L +K
Sbjct: 1049 QTVWACKSSLKQRRGRAGRVRKDGVCYHMVSRDRYNT-LEEFQLSEMRRMPLHELCLQVK 1107
Query: 294 KLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSK 351
L + D++ F + ++PP +++ A+ +L LGAL+ + LT +G ++S P+DP++ K
Sbjct: 1108 VLVLGDVIGFLSEALEPPETKSIDNAINLLIDLGALNANQELTPLGLQLSFIPVDPRIGK 1167
Query: 352 MLVESPKYNCSNEILSISAMLSVPN 376
M++ + C + IL+I++ + N
Sbjct: 1168 MIILGSYFRCLDPILTIASFSNQKN 1192
Score = 134 (52.2 bits), Expect = 1.5e-46, Sum P(2) = 1.5e-46
Identities = 43/166 (25%), Positives = 82/166 (49%)
Query: 385 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS---WCYDNFVNHRALKSADNVRQQ 441
Q+ + K + + DHL+ LN+++ + Q+ D + +C D F++ L+ V++Q
Sbjct: 1222 QQQPQQPKNLYPELQSDHLSFLNIFNGWLQSRMDGTEDQYCQD-FLSIPLLQQILKVKKQ 1280
Query: 442 L---VRIMARFNLKL----CSNDF-NSRDYYVNIRKAML-AGYFMQVAHLERTGQYLTVK 492
L + + N +L +N F N ++I +A++ +G F +A + ++ T+
Sbjct: 1281 LLSTINDLGIINAQLRDGFVNNSFFNENSNNLDIIRAIICSGLFPNIARQRKKREFKTLS 1340
Query: 493 DNQVVHLHPSNC-------LDHKPEWVIYNEYVLTSRNFIRTVTDV 531
+N LHPS+ L+ K WVI+ E T FI+T+T +
Sbjct: 1341 EN--TFLHPSSIVYNLFQELNPKENWVIFEEKFKTKLTFIKTITRI 1384
>DICTYBASE|DDB_G0268212 [details] [associations]
symbol:DDB_G0268212 "putative DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 dictyBase:DDB_G0268212 GO:GO:0005524
EMBL:AAFI02000003 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 RefSeq:XP_647649.1
ProteinModelPortal:Q55F84 IntAct:Q55F84 EnsemblProtists:DDB0233906
GeneID:8616466 KEGG:ddi:DDB_G0268212 Uniprot:Q55F84
Length = 455
Score = 343 (125.8 bits), Expect = 2.1e-46, Sum P(2) = 2.1e-46
Identities = 88/276 (31%), Positives = 154/276 (55%)
Query: 276 TYPEILR-SNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD---DDG 331
T PEI + NL +L LK ID+L F+ + P+ E + ++L L LGA+ D+G
Sbjct: 186 TTPEIEKCKNLTPFILQLKSFNIDNLKSFEMITSPSLELINQSLNELFRLGAISSNQDNG 245
Query: 332 N--LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPN---CFVRPREAQK 386
+ LT +G M PL+P SK+++ES K CS +IL+I +ML + N F+ + +
Sbjct: 246 SSKLTSIGNTMVGLPLEPIYSKVIIESEKLGCSEQILNIISMLLINNKNDLFINSKLSSS 305
Query: 387 AADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIM 446
A ++++ DHLTLLNVY+++ N P WC DN +N + +++ ++ QL+ +
Sbjct: 306 ALIDSQS-------DHLTLLNVYNSFISNKCSPIWCNDNQINFQTIQTVQQIKNQLLNCL 358
Query: 447 ARFNLKL--CSND-FNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDN-QVVHLHP- 501
+ ++KL C++D +S+ +I+K+ L+G+F VA Y T+ + + V LHP
Sbjct: 359 TKVSVKLLSCNDDGSSSKQSTDHIKKSFLSGFFNNVAKSTTDNSYETIVEPIRKVLLHPT 418
Query: 502 SNCLDHKPEWVIYNEYVLTSRN-FIRTVTDVRGEWL 536
S+ + ++V++ E R+ +I+ V+ + WL
Sbjct: 419 SSVVPESNQFVLFGETFKIDRSEYIKDVSVIDQSWL 454
Score = 167 (63.8 bits), Expect = 2.1e-46, Sum P(2) = 2.1e-46
Identities = 30/75 (40%), Positives = 54/75 (72%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV---LKNRPDLKLVV 68
+++TDG+L+RE + DPLL Y ++++D+ ER+L+TD+L LLK++ RPDLK+V+
Sbjct: 90 KFITDGLLVREMIVDPLLNNYSILIIDQVDERSLSTDLLLALLKKLEISTTKRPDLKIVI 149
Query: 69 MSAT-LEAEKFQGYF 82
+++T A + + +F
Sbjct: 150 LTSTNSNANEIKNFF 164
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 472 (171.2 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 119/303 (39%), Positives = 172/303 (56%)
Query: 99 IFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV---FLTGEEEIEDACRKITKEITNMGD 155
I Y + + E + V + SGD + + GEE E+ + I +
Sbjct: 708 IQYDENIDVKLSENVQQEVEDVDFSVQSGDAGILDDYEEGEENEEEE-EGFEESIDSKES 766
Query: 156 QVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVI 215
+VGP+ V+PLYS LP Q K+FE R +V+TN+AETSLTI GI YV+
Sbjct: 767 EVGPLYVLPLYSLLPTKQQMKVFEDPPPGS-------RICIVATNVAETSLTIPGIRYVV 819
Query: 216 DPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQ 275
D G +K++ YN V+S V +SKASA+QR+GRAGRT PG C+RLY+ F D PQ
Sbjct: 820 DCGRSKERKYNQENGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLYSSAVFE-DFFPQ 878
Query: 276 -TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD-DDGNL 333
+ PEILR + VL++K +GID + +F F PP +L +A E+L LGALD + +
Sbjct: 879 FSVPEILRMPFESIVLSMKSMGIDQIANFPFPTPPDRFSLKKAEELLVILGALDKEQKQI 938
Query: 334 TEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE-AQKAADEAK 392
T++G+KMS FPL P+ +K+L+ + C + I++I + LSV + F+ E DEA+
Sbjct: 939 TDLGKKMSLFPLSPRFAKILIIGNQQECLSYIIAIVSALSVGDPFIGENELVGNMNDEAR 998
Query: 393 ARF 395
F
Sbjct: 999 REF 1001
Score = 278 (102.9 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
Identities = 63/153 (41%), Positives = 90/153 (58%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNR-------PDL 64
+++TDG+LLRE MTD LL +Y I++DEAHER + TD+L G+L V+K R P L
Sbjct: 547 KFMTDGVLLREMMTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQL 606
Query: 65 ----KLVVMSATLEAEKFQG----YFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRT 116
KL++MSATL F + P++ V R +PV I + ++ DYLE A +
Sbjct: 607 YKPLKLIIMSATLRVSDFSENPALFKTPPPIINVQARQYPVSIHFNKKTNYDYLEEAFKK 666
Query: 117 VVQIHMCEPSGDILVFLTGEEEIEDACRKITKE 149
+IH P G IL+FLTG+ EI +K+ +E
Sbjct: 667 TCKIHRKLPEGGILIFLTGQNEITTLVKKLRQE 699
Score = 42 (19.8 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 489 LTVKDNQVVHLHPSNCLDHKPE----WVIYNEYVLTSRNFIRTVTD-VRGEWLIDIA 540
+ ++D V+LHP++ + + +++Y + T N T VR L+DI+
Sbjct: 1136 MPIEDGPFVYLHPNSLIAESGQIPSSYLVYQS-LSTKGNISEDETKKVRMNPLVDIS 1191
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 381 (139.2 bits), Expect = 9.8e-45, Sum P(2) = 9.8e-45
Identities = 121/412 (29%), Positives = 211/412 (51%)
Query: 126 SGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXX 185
+G ++V+L G ++ ++ + +Q+ ++ L+S + + Q+K+F
Sbjct: 460 AGAVIVYLPGYSDMTSLLARLESSLPR--EQI---TIILLHSQVDNSEQRKVFRTYPGVR 514
Query: 186 XXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAH 245
KI++STNI +TS+TI ++YVID G AK K Y+ + L ++ IS+A A
Sbjct: 515 L-------KIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLTWISQADAK 567
Query: 246 QRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDF 305
QR+GRAGR G C+RLY + T PEI+R L + + L KL D +F
Sbjct: 568 QRAGRAGRVCHGNCYRLYDNDRMAR-MNLYTIPEIMRRTL-DEICLLTKLAAPDKKIENF 625
Query: 306 M----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNC 361
+ D P + +M++ L LG LD+ +T +G ++E PL Q+ K LV S C
Sbjct: 626 LALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQIGKCLVYSIYLRC 685
Query: 362 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHI-DG--DHLTLLNVYHAYKQ-NNE 417
+ ++ I+A SV + FV E K + + +R DG D L ++ +Y + +
Sbjct: 686 LDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFAGDGMSDSLAVIKLYEEFTNLKRK 745
Query: 418 D-PSWCYDNFVNHRALK----SADNVRQQLVRIMARFN---LKLCSNDFNSRDYYVNIRK 469
D +C NF+ A++ +A +R + RI RF+ +L S+ FN+ D + IR
Sbjct: 746 DIGDFCERNFICRNAMEMFVSAASTLRDTVYRIF-RFSEASARLASS-FNN-DTNM-IRL 801
Query: 470 AMLAGYFMQVAHLERTGQ-YLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVL 519
A+ AG + ++A+++R + L + + +V + S+CL K + + +E++L
Sbjct: 802 ALTAGLYPKLAYMDRENKNQLVAEGDPLVQVSRSSCLRGKKKQKDLASEWIL 853
Score = 154 (59.3 bits), Expect = 9.8e-45, Sum P(2) = 9.8e-45
Identities = 36/92 (39%), Positives = 50/92 (54%)
Query: 15 TDGMLLREAMTDP--LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
T G LLR D + +++DEAHER L TD L K L+ P L+LV+MSAT
Sbjct: 308 TSGCLLRALAMDKKSFFKNTTHLIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMSAT 367
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
++ E YF G +M V GR V I++ ++
Sbjct: 368 MDLEALSNYFGGGTVMDVEGRSFEVSIYHLED 399
Score = 41 (19.5 bits), Expect = 7.1e-33, Sum P(2) = 7.1e-33
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 99 IFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEE 138
+ + P+ D + I ++ +C P D+L + G E
Sbjct: 118 VLFISRPQSDGQQQYILCNTKLDICPPLLDVLGQMAGNVE 157
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 360 (131.8 bits), Expect = 9.8e-45, Sum P(2) = 9.8e-45
Identities = 100/328 (30%), Positives = 179/328 (54%)
Query: 129 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVK--VVPLYSTLPPAMQQKIFEXXXXXXX 186
ILVFL G EI R + + +GD+ V PL+ST+ Q+ F
Sbjct: 970 ILVFLPGIAEI----RTLNDLL--LGDRSFQQNWLVYPLHSTIATEEQEAAF-------L 1016
Query: 187 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 246
RKIV++TNIAET +TI + VID G ++ ++ R ++ L+ + IS+A+A Q
Sbjct: 1017 VPPHGMRKIVLATNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFISRANAKQ 1076
Query: 247 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK--KLG-IDDLVHF 303
R GRAGR Q G CF ++T+ + + Q PE+LR +L + + +K K+G I++ +
Sbjct: 1077 RRGRAGRVQQGLCFHMFTKYRHDAIMADQQTPEMLRLSLQDLAIRVKICKIGGIEETLS- 1135
Query: 304 DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 363
+DPP+ + + RA++ L + AL +LT +G +++ PLD + K+++ + C +
Sbjct: 1136 KALDPPSAKNIRRAIDALIDVRALTQGEDLTPLGNQLARLPLDVFLGKLILLGSIFKCLD 1195
Query: 364 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ--------N 415
++++A+LS + FV P + AD + F D D LT+ N Y ++K+ +
Sbjct: 1196 MAITVAAILSSKSPFVAPFGQRSQADTVRLGFRRGDSDILTVYNAYLSWKRVCLAATGNS 1255
Query: 416 NEDPSWCYDNFVNHRALKSADNVRQQLV 443
+++ +C NF++ + L + ++++ QL+
Sbjct: 1256 SQEFQFCRKNFLSQQTLANIEDLKGQLL 1283
Score = 188 (71.2 bits), Expect = 9.8e-45, Sum P(2) = 9.8e-45
Identities = 38/94 (40%), Positives = 63/94 (67%)
Query: 13 YLTDGMLLR--EAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMS 70
+ T G+++R E D L +VLDE HER++ +D L +LK+++ R DLK+V+MS
Sbjct: 794 FATTGIVMRMLEGSND--LRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKVVLMS 851
Query: 71 ATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 104
AT++A++F Y GAP++ VPGR PV++ + ++
Sbjct: 852 ATVDADRFSNYLDGAPVLNVPGRTFPVQVNFLED 885
Score = 41 (19.5 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 27/99 (27%), Positives = 42/99 (42%)
Query: 275 QTYP---EILRSNLANTVLTL-KKLGIDDLVHFDFMDPPAPETLMRALEVLNYL-GALDD 329
+T+P L + T T+ +K+ + LV D PE+ + E+L L G
Sbjct: 874 RTFPVQVNFLEDAVELTGYTIDQKVPQERLVEIDEDAEVEPESSSKT-ELLKSLKGYSTR 932
Query: 330 DGN-LTEMGEKMSEFPLDPQMSKMLVESPKY-NCSNEIL 366
N L +M E +F L Q+ + P Y + S IL
Sbjct: 933 TRNTLAQMDEYKIDFDLIVQLISRIASDPNYQDYSKAIL 971
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 481 (174.4 bits), Expect = 1.3e-44, P = 1.3e-44
Identities = 138/434 (31%), Positives = 229/434 (52%)
Query: 10 GGRYL--TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLV 67
GG L T G+LLR+ ++P LE +V+DE HER + TD L LLK + + P L+LV
Sbjct: 555 GGALLFCTVGILLRKLQSNPSLEGVSHVVVDEVHERDVNTDFLLILLKGLQRLNPALRLV 614
Query: 68 VMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE----------PERDY-------- 109
+MSAT + E+F YF G P++KVPG ++PV+ Y ++ P R
Sbjct: 615 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDEC 674
Query: 110 -LEAAIRTVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPL 165
L+ + T + +H+ EP G IL FL G +EI+ +++ + + G ++P+
Sbjct: 675 ALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLILPV 730
Query: 166 YSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 225
+S +P Q+ IF+ RKIV++TNIAETS+TI+ IV+V+D G K++ Y
Sbjct: 731 HSNIPMMDQKAIFQQPPIGV-------RKIVLATNIAETSITINDIVHVVDSGLHKEERY 783
Query: 226 NPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 285
+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR+ L
Sbjct: 784 DLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MAPFQVPEILRTPL 842
Query: 286 ANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMS 341
N VL K + + + +F+ D P + + A+ +L +G LD LT +G++++
Sbjct: 843 ENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLA 901
Query: 342 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG- 400
DP+++K +V + + C + +L + + L+ + F + + D+ KA H G
Sbjct: 902 HISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGS 960
Query: 401 DHLTLLNVYHAYKQ 414
DHL + +++
Sbjct: 961 DHLAFVRAVSGWEE 974
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 480 (174.0 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 138/434 (31%), Positives = 229/434 (52%)
Query: 10 GGRYL--TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLV 67
GG L T G+LLR+ ++P LE +V+DE HER + TD L LLK + + P L+LV
Sbjct: 555 GGALLFCTVGILLRKLQSNPSLEGVSHVVVDEEHERDVNTDFLLILLKGLQRLNPALRLV 614
Query: 68 VMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE----------PERDY-------- 109
+MSAT + E+F YF G P++KVPG ++PV+ Y ++ P R
Sbjct: 615 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDEC 674
Query: 110 -LEAAIRTVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPL 165
L+ + T + +H+ EP G IL FL G +EI+ +++ + + G ++P+
Sbjct: 675 ALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLILPV 730
Query: 166 YSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 225
+S +P Q+ IF+ RKIV++TNIAETS+TI+ IV+V+D G K++ Y
Sbjct: 731 HSNIPMMDQKAIFQQPPIGV-------RKIVLATNIAETSITINDIVHVVDSGLHKEERY 783
Query: 226 NPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 285
+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR+ L
Sbjct: 784 DLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MAPFQVPEILRTPL 842
Query: 286 ANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMS 341
N VL K + + + +F+ D P + + A+ +L +G LD LT +G++++
Sbjct: 843 ENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLA 901
Query: 342 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG- 400
DP+++K +V + + C + +L + + L+ + F + + D+ KA H G
Sbjct: 902 HISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGS 960
Query: 401 DHLTLLNVYHAYKQ 414
DHL + +++
Sbjct: 961 DHLAFVRAVSGWEE 974
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 479 (173.7 bits), Expect = 2.0e-44, P = 2.0e-44
Identities = 138/434 (31%), Positives = 230/434 (52%)
Query: 10 GGRYL--TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLV 67
GG L T G+LLR+ ++P LE +++DE HER + TD L LLK + + P L+LV
Sbjct: 501 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 560
Query: 68 VMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE-----PERDYL----------EA 112
+MSAT + E+F YF G P++KVPG ++PV+ Y ++ + YL E
Sbjct: 561 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDEC 620
Query: 113 AIR----TVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPL 165
A+ T + +H+ EP G IL FL G +EI+ +++ + + G ++P+
Sbjct: 621 ALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLILPV 676
Query: 166 YSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 225
+S +P Q+ IF+ RKIV++TNIAETS+TI+ IV+V+D G K++ Y
Sbjct: 677 HSNIPMMDQKAIFQQPPVGV-------RKIVLATNIAETSITINDIVHVVDSGLHKEERY 729
Query: 226 NPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 285
+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR+ L
Sbjct: 730 DLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILRTPL 788
Query: 286 ANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMS 341
N VL K + + + +F+ D P + + A+ +L +G LD LT +G++++
Sbjct: 789 ENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLA 847
Query: 342 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG- 400
DP+++K +V + + C + +L + + L+ + F + + D+ KA H G
Sbjct: 848 HISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGS 906
Query: 401 DHLTLLNVYHAYKQ 414
DHL + +++
Sbjct: 907 DHLAFVRAVAGWEE 920
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 479 (173.7 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 138/434 (31%), Positives = 230/434 (52%)
Query: 10 GGRYL--TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLV 67
GG L T G+LLR+ ++P LE +++DE HER + TD L LLK + + P L+LV
Sbjct: 529 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 588
Query: 68 VMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE-----PERDYL----------EA 112
+MSAT + E+F YF G P++KVPG ++PV+ Y ++ + YL E
Sbjct: 589 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDEC 648
Query: 113 AIR----TVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPL 165
A+ T + +H+ EP G IL FL G +EI+ +++ + + G ++P+
Sbjct: 649 ALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLILPV 704
Query: 166 YSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 225
+S +P Q+ IF+ RKIV++TNIAETS+TI+ IV+V+D G K++ Y
Sbjct: 705 HSNIPMMDQKAIFQQPPVGV-------RKIVLATNIAETSITINDIVHVVDSGLHKEERY 757
Query: 226 NPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 285
+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR+ L
Sbjct: 758 DLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILRTPL 816
Query: 286 ANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMS 341
N VL K + + + +F+ D P + + A+ +L +G LD LT +G++++
Sbjct: 817 ENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLA 875
Query: 342 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG- 400
DP+++K +V + + C + +L + + L+ + F + + D+ KA H G
Sbjct: 876 HISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGS 934
Query: 401 DHLTLLNVYHAYKQ 414
DHL + +++
Sbjct: 935 DHLAFVRAVAGWEE 948
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 479 (173.7 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 137/434 (31%), Positives = 229/434 (52%)
Query: 10 GGRYL--TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLV 67
GG L T G+LLR+ ++P LE +++DE HER + TD L LLK + + P L+LV
Sbjct: 557 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 616
Query: 68 VMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE----------PERDY-------- 109
+MSAT + E+F YF G P++KVPG ++PV+ Y ++ P R
Sbjct: 617 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDEC 676
Query: 110 -LEAAIRTVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPL 165
L+ + T + +H+ EP G IL FL G +EI+ +++ + + G ++P+
Sbjct: 677 ALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLILPV 732
Query: 166 YSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 225
+S +P Q+ IF+ RKIV++TNIAETS+TI+ IV+V+D G K++ Y
Sbjct: 733 HSNIPMMDQKAIFQQPPVGV-------RKIVLATNIAETSITINDIVHVVDSGLHKEERY 785
Query: 226 NPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 285
+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR+ L
Sbjct: 786 DLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILRTPL 844
Query: 286 ANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMS 341
N VL K + + + +F+ D P + + A+ +L +G LD LT +G++++
Sbjct: 845 ENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLA 903
Query: 342 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG- 400
DP+++K +V + + C + +L + + L+ + F + + D+ KA H G
Sbjct: 904 HISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGS 962
Query: 401 DHLTLLNVYHAYKQ 414
DHL + +++
Sbjct: 963 DHLAFVRAVSGWEE 976
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 477 (173.0 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 136/434 (31%), Positives = 229/434 (52%)
Query: 10 GGRYL--TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLV 67
GG L T G+LLR+ ++P LE +++DE HER + TD L LLK + + P L+LV
Sbjct: 529 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 588
Query: 68 VMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE----------PERDY-------- 109
+MSAT + E+F YF G P++KVPG ++PV+ Y ++ P R
Sbjct: 589 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDEC 648
Query: 110 -LEAAIRTVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPL 165
L+ + T + +H+ EP G IL FL G +EI+ +++ + + G ++P+
Sbjct: 649 ALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLILPV 704
Query: 166 YSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 225
+S +P Q+ IF+ RKIV++TNIAETS+T++ IV+V+D G K++ Y
Sbjct: 705 HSNIPMMDQKAIFQQPPVGV-------RKIVLATNIAETSITVNDIVHVVDSGLHKEERY 757
Query: 226 NPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 285
+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR+ L
Sbjct: 758 DLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILRTPL 816
Query: 286 ANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMS 341
N VL K + + + +F+ D P + + A+ +L +G LD LT +G++++
Sbjct: 817 ENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLA 875
Query: 342 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG- 400
DP+++K +V + + C + +L + + L+ + F + + D+ KA H G
Sbjct: 876 HISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGS 934
Query: 401 DHLTLLNVYHAYKQ 414
DHL + +++
Sbjct: 935 DHLAFVRAVAGWEE 948
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 477 (173.0 bits), Expect = 3.4e-44, P = 3.4e-44
Identities = 136/434 (31%), Positives = 229/434 (52%)
Query: 10 GGRYL--TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLV 67
GG L T G+LLR+ ++P LE +++DE HER + TD L LLK + + P L+LV
Sbjct: 529 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 588
Query: 68 VMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE----------PERDY-------- 109
+MSAT + E+F YF G P++KVPG ++PV+ Y ++ P R
Sbjct: 589 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDEC 648
Query: 110 -LEAAIRTVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPL 165
L+ + T + +H+ EP G IL FL G +EI+ +++ + + G ++P+
Sbjct: 649 ALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLILPV 704
Query: 166 YSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 225
+S +P Q+ IF+ RKIV++TNIAETS+T++ IV+V+D G K++ Y
Sbjct: 705 HSNIPMMDQKAIFQQPPLGV-------RKIVLATNIAETSITVNDIVHVVDSGLHKEERY 757
Query: 226 NPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 285
+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR+ L
Sbjct: 758 DLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILRTPL 816
Query: 286 ANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMS 341
N VL K + + + +F+ D P + + A+ +L +G LD LT +G++++
Sbjct: 817 ENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLA 875
Query: 342 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG- 400
DP+++K +V + + C + +L + + L+ + F + + D+ KA H G
Sbjct: 876 HISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGS 934
Query: 401 DHLTLLNVYHAYKQ 414
DHL + +++
Sbjct: 935 DHLAFVRAVAGWEE 948
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 477 (173.0 bits), Expect = 3.4e-44, P = 3.4e-44
Identities = 136/434 (31%), Positives = 229/434 (52%)
Query: 10 GGRYL--TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLV 67
GG L T G+LLR+ ++P LE +++DE HER + TD L LLK + + P L+LV
Sbjct: 529 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 588
Query: 68 VMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE----------PERDY-------- 109
+MSAT + E+F YF G P++KVPG ++PV+ Y ++ P R
Sbjct: 589 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDEC 648
Query: 110 -LEAAIRTVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPL 165
L+ + T + +H+ EP G IL FL G +EI+ +++ + + G ++P+
Sbjct: 649 ALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLILPV 704
Query: 166 YSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 225
+S +P Q+ IF+ RKIV++TNIAETS+T++ IV+V+D G K++ Y
Sbjct: 705 HSNIPMMDQKAIFQQPPLGV-------RKIVLATNIAETSITVNDIVHVVDSGLHKEERY 757
Query: 226 NPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 285
+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR+ L
Sbjct: 758 DLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILRTPL 816
Query: 286 ANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMS 341
N VL K + + + +F+ D P + + A+ +L +G LD LT +G++++
Sbjct: 817 ENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLA 875
Query: 342 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG- 400
DP+++K +V + + C + +L + + L+ + F + + D+ KA H G
Sbjct: 876 HISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGS 934
Query: 401 DHLTLLNVYHAYKQ 414
DHL + +++
Sbjct: 935 DHLAFVRAVAGWEE 948
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 477 (173.0 bits), Expect = 3.6e-44, P = 3.6e-44
Identities = 136/434 (31%), Positives = 229/434 (52%)
Query: 10 GGRYL--TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLV 67
GG L T G+LLR+ ++P LE +++DE HER + TD L LLK + + P L+LV
Sbjct: 552 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 611
Query: 68 VMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE----------PERDY-------- 109
+MSAT + E+F YF G P++KVPG ++PV+ Y ++ P R
Sbjct: 612 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDEC 671
Query: 110 -LEAAIRTVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPL 165
L+ + T + +H+ EP G IL FL G +EI+ +++ + + G ++P+
Sbjct: 672 ALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLILPV 727
Query: 166 YSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 225
+S +P Q+ IF+ RKIV++TNIAETS+T++ IV+V+D G K++ Y
Sbjct: 728 HSNIPMMDQKAIFQQPPLGV-------RKIVLATNIAETSITVNDIVHVVDSGLHKEERY 780
Query: 226 NPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 285
+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR+ L
Sbjct: 781 DLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILRTPL 839
Query: 286 ANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMS 341
N VL K + + + +F+ D P + + A+ +L +G LD LT +G++++
Sbjct: 840 ENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLA 898
Query: 342 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG- 400
DP+++K +V + + C + +L + + L+ + F + + D+ KA H G
Sbjct: 899 HISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGS 957
Query: 401 DHLTLLNVYHAYKQ 414
DHL + +++
Sbjct: 958 DHLAFVRAVAGWEE 971
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 477 (173.0 bits), Expect = 3.6e-44, P = 3.6e-44
Identities = 136/434 (31%), Positives = 229/434 (52%)
Query: 10 GGRYL--TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLV 67
GG L T G+LLR+ ++P LE +++DE HER + TD L LLK + + P L+LV
Sbjct: 557 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 616
Query: 68 VMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE----------PERDY-------- 109
+MSAT + E+F YF G P++KVPG ++PV+ Y ++ P R
Sbjct: 617 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDEC 676
Query: 110 -LEAAIRTVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPL 165
L+ + T + +H+ EP G IL FL G +EI+ +++ + + G ++P+
Sbjct: 677 ALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLILPV 732
Query: 166 YSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 225
+S +P Q+ IF+ RKIV++TNIAETS+T++ IV+V+D G K++ Y
Sbjct: 733 HSNIPMMDQKAIFQQPPVGV-------RKIVLATNIAETSITVNDIVHVVDSGLHKEERY 785
Query: 226 NPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 285
+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR+ L
Sbjct: 786 DLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILRTPL 844
Query: 286 ANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMS 341
N VL K + + + +F+ D P + + A+ +L +G LD LT +G++++
Sbjct: 845 ENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLA 903
Query: 342 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG- 400
DP+++K +V + + C + +L + + L+ + F + + D+ KA H G
Sbjct: 904 HISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGS 962
Query: 401 DHLTLLNVYHAYKQ 414
DHL + +++
Sbjct: 963 DHLAFVRAVAGWEE 976
WARNING: HSPs involving 64 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 574 541 0.00094 119 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 314
No. of states in DFA: 615 (65 KB)
Total size of DFA: 308 KB (2158 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.06u 0.10s 45.16t Elapsed: 00:00:02
Total cpu time: 45.13u 0.10s 45.23t Elapsed: 00:00:02
Start: Tue May 21 11:24:59 2013 End: Tue May 21 11:25:01 2013
WARNINGS ISSUED: 2