BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008209
(574 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 1091 bits (2821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/565 (90%), Positives = 544/565 (96%), Gaps = 2/565 (0%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+YLTDGMLLREAM DPLLERYKVI+LDEAHERTLATDVLFGLLKEVL+NRPDLKLVVMSA
Sbjct: 165 KYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSA 224
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TLEAEKFQ YF GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP GDILV
Sbjct: 225 TLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILV 284
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FLTGEEEIEDACRKI KE++N+GDQVGPVKVVPLYSTLPPAMQQKIF+PAP P EGGP
Sbjct: 285 FLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPA 344
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPR+RVESLLVSPISKASAHQRSGRA
Sbjct: 345 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRA 404
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT+PGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP
Sbjct: 405 GRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 464
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETLMRALEVLNYLGALDD+GNLT+ GE MSEFPLDPQMSKML+ SP++NCSNEILS+SAM
Sbjct: 465 ETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAM 524
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP+WC++NFVN+RA
Sbjct: 525 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRA 584
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
+KSADNVRQQLVRIM+RFNLK+CS DFNSRDYYVNIRKAMLAGYFMQVAHLERTG YLTV
Sbjct: 585 MKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTV 644
Query: 492 KDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQ 551
KDNQVVHLHPSNCLDHKPEWVIYNEYVLT+RNFIRTVTD+RGEWL+D+A HYYDLSNFP
Sbjct: 645 KDNQVVHLHPSNCLDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPN 704
Query: 552 CEAKRVLERLYRKREKER--ENNRK 574
CEAKR LE+LY+KRE+E+ NRK
Sbjct: 705 CEAKRALEKLYKKREREKNESKNRK 729
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/554 (74%), Positives = 485/554 (87%), Gaps = 2/554 (0%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VMSA
Sbjct: 234 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSA 293
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GDIL 130
TL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD+L
Sbjct: 294 TLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGP 190
+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFEP PPP K+ G
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEP-PPPKKQNGA 412
Query: 191 PGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
GRK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+GR
Sbjct: 413 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGR 472
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPA
Sbjct: 473 AGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPA 532
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI+A
Sbjct: 533 PETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 592
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N+R
Sbjct: 593 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 652
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG YLT
Sbjct: 653 SLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLT 712
Query: 491 VKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFP 550
VKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SNFP
Sbjct: 713 VKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFP 772
Query: 551 QCEAKRVLERLYRK 564
QCEAKR L+R+ K
Sbjct: 773 QCEAKRQLDRIIAK 786
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/554 (74%), Positives = 485/554 (87%), Gaps = 2/554 (0%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VMSA
Sbjct: 234 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSA 293
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GDIL 130
TL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD+L
Sbjct: 294 TLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGP 190
+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFEP PPP K+ G
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEP-PPPKKQNGA 412
Query: 191 PGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
GRK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+GR
Sbjct: 413 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGR 472
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPA
Sbjct: 473 AGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPA 532
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI+A
Sbjct: 533 PETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 592
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N+R
Sbjct: 593 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 652
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG YLT
Sbjct: 653 SLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLT 712
Query: 491 VKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFP 550
VKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SNFP
Sbjct: 713 VKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFP 772
Query: 551 QCEAKRVLERLYRK 564
QCEAKR L+R+ K
Sbjct: 773 QCEAKRQLDRIIAK 786
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/554 (74%), Positives = 485/554 (87%), Gaps = 2/554 (0%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VMSA
Sbjct: 234 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSA 293
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GDIL 130
TL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD+L
Sbjct: 294 TLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGP 190
+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFEP PPP K+ G
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEP-PPPKKQNGA 412
Query: 191 PGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
GRK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+GR
Sbjct: 413 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGR 472
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPA
Sbjct: 473 AGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPA 532
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI+A
Sbjct: 533 PETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 592
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N+R
Sbjct: 593 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 652
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG YLT
Sbjct: 653 SLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLT 712
Query: 491 VKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFP 550
VKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SNFP
Sbjct: 713 VKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFP 772
Query: 551 QCEAKRVLERLYRK 564
QCEAKR L+R+ K
Sbjct: 773 QCEAKRQLDRIIAK 786
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/548 (70%), Positives = 466/548 (85%), Gaps = 2/548 (0%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y TDGMLLREAM PLL++YKV++LDEAHERTLATD+L GL+KE+++NR D+K+V+MSA
Sbjct: 178 KYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSA 237
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDIL 130
TL+A KFQ YF PL+ VPGR PVEIF+T E+DYLEAAIRTV+QIHM E GDIL
Sbjct: 238 TLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDIL 297
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGP 190
+FLTG+EEIE+AC++I +EI +G G + +PLYSTLPPA QQ+IFEPAPP ++ G
Sbjct: 298 LFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPP-NRPNGA 356
Query: 191 PGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK V+STNIAETSLTIDG+V+VIDPGF+KQKVYNPR+RVESLLV PISKASA QR+GR
Sbjct: 357 ISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGR 416
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PGKCFRLYTE ++ +++Q QTYPEILRSNL + VL LKKLG +DLVHFDFMDPPA
Sbjct: 417 AGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPA 476
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PETLMRALE+LNYL A++DDG LTE+G M+EFPLDPQ++KML+ S + NCSNEILSI+A
Sbjct: 477 PETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITA 536
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP C+VRP E + ADEAKARF HIDGDHLTLLNVYH++KQN EDP WCYDNF+N+R
Sbjct: 537 MLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYR 596
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
+K+AD VR QL R+M ++NL+ S DF SRDYY+NIRKA++AG+FMQVAHLER+G Y+T
Sbjct: 597 TMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVT 656
Query: 491 VKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFP 550
VKDNQ+V+LHPS LDHKPEW +YNE+VLT++NFIRTVTDVR EWL+ IAP YYDL NFP
Sbjct: 657 VKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFP 716
Query: 551 QCEAKRVL 558
+ KR L
Sbjct: 717 DGDTKRKL 724
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/567 (65%), Positives = 463/567 (81%), Gaps = 6/567 (1%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAMTD +L RY I+LDEAHERTLATD+L GL+K + RPDLK++VMSA
Sbjct: 171 KYMTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSA 230
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A+KFQ YF+ APL+ VPGR +PVEI+YTQEPERDYLEAA+RTV+QIH+ E GDILV
Sbjct: 231 TLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILV 290
Query: 132 FLTGEEEIEDACRKITKEITNMGDQ--VGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGG 189
FLTGEEEIEDACRKIT E ++ + GP+KV PLY +LPP QQ+IFEP P +K G
Sbjct: 291 FLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGY 350
Query: 190 PPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 249
GRK+V+STNIAETSLTIDGIVYV+DPGF+KQK+YNPR+RVESLLVSPISKASA QR+G
Sbjct: 351 --GRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAG 408
Query: 250 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 309
RAGRT+PGKCFRLYTE++F +L QTYPEILRSNL++TVL LKKLGIDDLVHFD+MDPP
Sbjct: 409 RAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPP 468
Query: 310 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 369
APET+MRALE LNYL LDD+G+LT +G K SEFPLDP ++ ML+ SP++ CSNE+LS++
Sbjct: 469 APETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLT 528
Query: 370 AMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNH 429
A+LSVPN FVRP A+K ADE + +F H DGDHLTLLNVYHAYK WC+++F++H
Sbjct: 529 ALLSVPNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLSH 588
Query: 430 RALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQ-Y 488
RAL SADNVR+QL R M R ++L S F+ ++YYVNIR+A+++G+FMQVA G+ Y
Sbjct: 589 RALISADNVRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNY 648
Query: 489 LTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
+T+KDNQVV LHPS L PEWV+YNE+VLT+++FIR VT +R EWLI++AP+YYDL +
Sbjct: 649 VTMKDNQVVSLHPSCGLSVTPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDD 708
Query: 549 FPQC-EAKRVLERLYRKREKERENNRK 574
F E K L+++Y+ + ++N R+
Sbjct: 709 FDNNKEVKSALQKVYQMAARSKKNARR 735
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/571 (64%), Positives = 454/571 (79%), Gaps = 19/571 (3%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLREAM D L RY I+LDEAHERTLATD+L GLLK+V+K RPDLK+++MSA
Sbjct: 189 KYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSA 248
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+AEKFQ YF APL+ VPGR +PVE++YT E +RDYL++AIRTV+QIH E +GDIL+
Sbjct: 249 TLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILL 308
Query: 132 FLTGEEEIEDACRKITKEITNMGDQV------GPVKVVPLYSTLPPAMQQKIFEPAPPPS 185
FLTGE+EIEDA RKI+ E GDQ+ GP+ V PLY +LPP QQ+IFEPAP
Sbjct: 309 FLTGEDEIEDAVRKISLE----GDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAP--E 362
Query: 186 KEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAH 245
G PGRK+V+STNIAETSLTIDGIVYV+DPGF+KQKVYNPR+RVESLLVSPISKASA
Sbjct: 363 SHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQ 422
Query: 246 QRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDF 305
QR+GRAGRT+PGKCFRLYTE++F +L Q+YPEILRSNL++TVL LKKLGIDDLVHFDF
Sbjct: 423 QRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDF 482
Query: 306 MDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEI 365
MDPPAPET+MRALE LNYL LDD+GNLT +G S+FPLDP ++ ML+ S ++ CS EI
Sbjct: 483 MDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEI 542
Query: 366 LSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP----SW 421
L+I AMLSVPN F+RP + +K AD+AK F H DGDH+TLLNVYHA+K + W
Sbjct: 543 LTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKW 602
Query: 422 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 481
C D+++N+R+L +ADN+R QL R+M R+NL+L + D+ S Y+ NIRKA+ +G+FMQVA
Sbjct: 603 CRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAK 662
Query: 482 LERTGQ--YLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 539
+R+G Y+TVKDNQ V +HPS L H EWVIYNE+VLTS+N+IRTVT VR EWLI+I
Sbjct: 663 -KRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEI 721
Query: 540 APHYYDLSNFPQCEAKRVLERLYRKREKERE 570
AP YYDLSNF + + K LER+ K ++ E
Sbjct: 722 APAYYDLSNFQKGDVKLSLERIKEKVDRLNE 752
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/552 (64%), Positives = 441/552 (79%), Gaps = 12/552 (2%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+YLTDGMLLRE+M+DP L +Y VI+LDEAHERTL+TD+LFGL+K++LK R DLKL+VMSA
Sbjct: 172 KYLTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSA 231
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TLEA KFQ YF APL+KVPGRLHPVEIFYT+E +DYLE+A+RTV+ IH E +GDILV
Sbjct: 232 TLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILV 291
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FLTGEEEIED C KI +E G + P+K +PLYS+LP Q KIF+ KE
Sbjct: 292 FLTGEEEIEDTCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFDTC----KE---- 341
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK +VSTNIAETSLTIDGIV+V+DPGF+KQK YNPR RVESLLV+PISKASA+QR+GRA
Sbjct: 342 -RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRA 400
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT+PGKCFRLYTEK+F + QT+PEILRSNLA+ VL L KLG+ DLVHFDFMDPP P
Sbjct: 401 GRTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVP 460
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+TL+RALEVL+YLGALDD+G LTE+G MSEFPLDPQ+SKML+ S + +CSNEIL+I+AM
Sbjct: 461 DTLIRALEVLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAM 520
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LS PNCF+RP++ + AD AK F H DGDHLT+LNVYH++K+N EDP+WCYDNF+NHRA
Sbjct: 521 LSAPNCFMRPKDNRIEADSAKKSFDHFDGDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRA 580
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
+K AD+VR QL RI+ RF L L S D NS+ YY NI+K + AG+FMQVA E+ Y T+
Sbjct: 581 IKQADSVRSQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTL 640
Query: 492 KDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQ 551
D Q V HPS L +PE+ IYNE+VLTS N+IRT+TDV+ +WL+++AP Y+ +FP+
Sbjct: 641 GDEQSVIFHPSTGLTRRPEFCIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPK 700
Query: 552 CEAKRVLERLYR 563
+ K ++R R
Sbjct: 701 -KTKETIQRAQR 711
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/455 (76%), Positives = 400/455 (87%), Gaps = 2/455 (0%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE MTDPLLERY VI+LDEAHERT+ATD+L GLLKEV K R DLKLVVMSA
Sbjct: 2 KYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQRSDLKLVVMSA 61
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDIL 130
TL+A KFQ YF APLM VPGR HPVEIFYT EPERDYLEAAIRTVVQIHMCE GD+L
Sbjct: 62 TLDAGKFQHYFDNAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVL 121
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGP 190
+FLTG+EEIE+AC++I +E+ N+G +VG +K +PLYSTLPPAMQQ+IFE APP +K G
Sbjct: 122 LFLTGQEEIEEACKRIKREVDNLGPEVGDLKTIPLYSTLPPAMQQRIFEHAPP-NKANGA 180
Query: 191 PGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
GRK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLVSPISKASA QR GR
Sbjct: 181 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRVGR 240
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT+PGKCFRLYTEK++++++Q TYPEILRSNL VL LKKLGIDDLVHFDFMDPPA
Sbjct: 241 AGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPA 300
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
PETLMRALE+LNYLGALDD G+LT +G M+EFPLDPQ++KM++ S Y+CSNEILS++A
Sbjct: 301 PETLMRALELLNYLGALDDSGDLTRLGSMMAEFPLDPQLAKMVIASTDYSCSNEILSVTA 360
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP CF+RP EA+K ADEAK RF HIDGDHLTLLNVYHA+KQNNEDP WCYDNF+ +R
Sbjct: 361 MLSVPQCFLRPNEAKKLADEAKMRFAHIDGDHLTLLNVYHAFKQNNEDPQWCYDNFIQYR 420
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYV 465
+LKSAD+VRQQL RIM RF L+ S +FNS+DYY+
Sbjct: 421 SLKSADSVRQQLARIMDRFALQRTSTNFNSKDYYL 455
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 605 bits (1559), Expect = e-172, Method: Compositional matrix adjust.
Identities = 291/557 (52%), Positives = 408/557 (73%), Gaps = 15/557 (2%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+++TDG+LLRE + DP L Y VI+LDEAHERT++TDVLFGLLK+ L+ RP+LK+++ SA
Sbjct: 602 KFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSA 661
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TLEAEKF YF A L +PGR PV+I YT++PE DYL+A++ TV+QIH+ EP GDIL+
Sbjct: 662 TLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILL 721
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FLTG+EEI+ AC+ + + + ++G V + ++P+YS LP MQ KIFEPAPP S
Sbjct: 722 FLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGS------ 775
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YVIDPGF+KQK +NP+ ++SL+V+PIS+A+A QRSGRA
Sbjct: 776 -RKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRA 834
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE +F N++ + PEI R+NL NTVLT+K +GI+DL++FDFMDPP
Sbjct: 835 GRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPV 894
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+TL+ A+E L LGALD++G LT +G KM+EFPLDPQ+SKML+ S CS+EIL++ AM
Sbjct: 895 QTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAM 954
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP+E Q AD+ KA+F +GDHLTLLNVY ++K + WC++NFV R+
Sbjct: 955 LSVQNVFYRPKEKQALADQKKAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARS 1014
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
L+ A +VR+QL+ IM R+ L + S N Y I+KA+ +G+F + + Y T+
Sbjct: 1015 LRRAQDVRKQLITIMDRYKLDIISAGRN----YTKIQKAICSGFFANASKKDPNEGYKTL 1070
Query: 492 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN-- 548
+ Q V++HPS+ L + P+WVIY+E V+T++ ++R V + +WL+++AP ++ S+
Sbjct: 1071 VEGQPVYIHPSSTLFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPN 1130
Query: 549 -FPQCEAKRVLERLYRK 564
+ + K +E LY K
Sbjct: 1131 KISKRKRKEKIEPLYDK 1147
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 600 bits (1546), Expect = e-170, Method: Compositional matrix adjust.
Identities = 284/551 (51%), Positives = 401/551 (72%), Gaps = 12/551 (2%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + D L +Y VI+LDEAHERT+ TDVLFGLLK+++K R DL+L+V SA
Sbjct: 609 KYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSA 668
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+AEKF GYF+ + +PGR PVEI YT++PE DYL+AA+ TV+QIH+ EP GDILV
Sbjct: 669 TLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILV 728
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FLTG+EEI+ AC+ + + + +G V + ++P+YS LP MQ +IF+P PPP K
Sbjct: 729 FLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDP-PPPGK----- 782
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+VV+TNIAE SLTIDGI YV+DPGFAKQ VYNP+ +ESL+++PIS+ASA QR+GRA
Sbjct: 783 -RKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRA 841
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE ++ N++ P + PEI R NL T LT+K +GI+DL+ FDFMDPP P
Sbjct: 842 GRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQP 901
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+ L+ A+E L LGALD++G LT++G KM+EFPL+P +SKML+ S CS+EIL++ AM
Sbjct: 902 QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAM 961
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
+ N F RPRE Q AD+ +A+F +GDHLTLL VY A+K N WC++NF+ R+
Sbjct: 962 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRS 1021
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
L+ A +VR+QL+ IM ++ L + + N + IRKA+ AG+F A + Y T+
Sbjct: 1022 LRRAQDVRKQLLSIMDKYKLDVVTAGKN----FTKIRKAITAGFFFHGARKDPQEGYRTL 1077
Query: 492 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFP 550
+NQ V++HPS+ L +P+WVIY++ V+T++ ++R VT + +WL+++AP ++ +S+
Sbjct: 1078 VENQPVYIHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPT 1137
Query: 551 QCEAKRVLERL 561
+ ++ ER+
Sbjct: 1138 KMSKRKRQERI 1148
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 593 bits (1529), Expect = e-168, Method: Compositional matrix adjust.
Identities = 284/560 (50%), Positives = 406/560 (72%), Gaps = 15/560 (2%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SA
Sbjct: 659 KYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSA 718
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILV
Sbjct: 719 TLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILV 778
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FLTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+PAPP S
Sbjct: 779 FLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------ 832
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRA
Sbjct: 833 -RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 891
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P
Sbjct: 892 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 951
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +M
Sbjct: 952 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1011
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+
Sbjct: 1012 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1071
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
L+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1072 LRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTL 1127
Query: 492 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN-- 548
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1128 IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPT 1187
Query: 549 -FPQCEAKRVLERLYRKREK 567
+ + ++ LE LY + E+
Sbjct: 1188 KLSKQKKQQRLEPLYNRYEE 1207
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 593 bits (1528), Expect = e-168, Method: Compositional matrix adjust.
Identities = 284/560 (50%), Positives = 406/560 (72%), Gaps = 15/560 (2%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SA
Sbjct: 683 KYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSA 742
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILV
Sbjct: 743 TLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILV 802
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FLTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+PAPP S
Sbjct: 803 FLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------ 856
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRA
Sbjct: 857 -RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 915
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P
Sbjct: 916 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 975
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +M
Sbjct: 976 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1035
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+
Sbjct: 1036 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1095
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
L+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1096 LRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTL 1151
Query: 492 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN-- 548
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1152 IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPT 1211
Query: 549 -FPQCEAKRVLERLYRKREK 567
+ + ++ LE LY + E+
Sbjct: 1212 KLSKQKKQQRLEPLYNRYEE 1231
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 591 bits (1523), Expect = e-168, Method: Compositional matrix adjust.
Identities = 282/535 (52%), Positives = 389/535 (72%), Gaps = 13/535 (2%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGML+RE +T P L Y V+++DEAHERTL TD+LFGLLK++ + RPDLKL++ SA
Sbjct: 561 QYMTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSA 620
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++AE+F YF GAP +PGR + V YTQ PE DYL+AA+ TV+QIH+ EP GDILV
Sbjct: 621 TMDAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILV 680
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FLTG+EE++ A + +G ++ + + +YSTLP +Q KIFEP PP +
Sbjct: 681 FLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNA------ 734
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI+YVIDPGF KQK++NPR +ESL+++P+S+ASA+QR GRA
Sbjct: 735 -RKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRA 793
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR PGKCFRL+T +F+N+L+ T PEI R+NL N VL LK +GI+DL++FDFMDPP
Sbjct: 794 GRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPA 853
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+TL+ ALE L LGAL+D G LT++G KM+EFP+DPQ+SKM++ S KY CS EIL+I AM
Sbjct: 854 QTLIAALEQLYALGALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAM 913
Query: 372 LSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
LSV N F RP++ AAD A+ F H GDHLTL+NV++ ++++ WC++NF+ HR
Sbjct: 914 LSVGNTIFYRPKDKAFAADAARKLFFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHR 973
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
++K A +VR QL ++ R + L SN D +IRK + +G+F A LE++G + T
Sbjct: 974 SMKRAQDVRDQLELLLERVEIPLVSN----VDDTDSIRKCIASGFFYNSAKLEKSGLFRT 1029
Query: 491 VKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
K NQ V +HPS+CL P+WV+Y+E VLT++ F+R + +++ WL +IAPH Y
Sbjct: 1030 TKHNQSVQIHPSSCLFQSPPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIY 1084
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 590 bits (1520), Expect = e-167, Method: Compositional matrix adjust.
Identities = 287/564 (50%), Positives = 406/564 (71%), Gaps = 16/564 (2%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGML RE + DPLL +Y VI+LDEAHERT+ATDVLFGLLK + RPDLKL+V SA
Sbjct: 605 KYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSA 664
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+AE+F YFY P+ +PGR +PVEI YT++PE DYL+AA+ TV+QIH+ E GDILV
Sbjct: 665 TLDAERFSSYFYKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILV 724
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FLTG+EEI+ +C + + +GD + + ++P+YS LP +Q +IFEPAPP
Sbjct: 725 FLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPG------- 777
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
GRK+V++TNIAETSLTIDGI YV+DPGF KQ ++P++ ++SL+V+PIS+A A QRSGRA
Sbjct: 778 GRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRA 837
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE ++ N++ P PEI R NL++T+L LK +GI+DL++FDFMDPP
Sbjct: 838 GRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPA 897
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+T++ AL+ L L ALDD+G LT +G KM++FP++PQ+SK+L+ S + CS E+LSI AM
Sbjct: 898 QTMIAALQNLYALSALDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAM 957
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVPN + RPRE Q+ AD +A+F + + DHLTLLNVY +K N +WCY++++ R
Sbjct: 958 LSVPNIWSRPREKQQEADRQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARG 1017
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLE-RTGQYLT 490
++ A++VR+QL+R+M R+ + S R+ I +A+ +GYF VA + G Y T
Sbjct: 1018 MRRAEDVRKQLIRLMDRYRHPVVSCG-RKREL---ILRALCSGYFTNVAKRDSHEGCYKT 1073
Query: 491 VKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNF 549
+ +N V++HPS L K EWVIY+E + TS+ ++ TV+ V +WL+++AP ++ +N
Sbjct: 1074 IVENAPVYMHPSGVLFGKAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANA 1133
Query: 550 PQ-CEAKRVLER--LYRKREKERE 570
Q + K+ L+ LY + EK E
Sbjct: 1134 NQVSKTKKNLKVLPLYNRFEKPDE 1157
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 581 bits (1497), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/560 (50%), Positives = 392/560 (70%), Gaps = 18/560 (3%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY+TDGMLLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SA
Sbjct: 494 RYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASA 553
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++ +F +F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILV
Sbjct: 554 TMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILV 613
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FLTG+EEIE AC + +G ++ + V+P+Y+ LP MQ +IF+P PP +
Sbjct: 614 FLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA------ 667
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+VV+TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRA
Sbjct: 668 -RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRA 726
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR GKCFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP
Sbjct: 727 GRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPY 786
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ ALE L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AM
Sbjct: 787 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 846
Query: 372 LSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
LSV N F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV R
Sbjct: 847 LSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFR 906
Query: 431 ALKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 488
+++ A +VR+QL ++ R + L C D Y+ +RKA+ AGYF A L R+G Y
Sbjct: 907 SMRRARDVREQLEGLLERVEVGLSSCQGD------YIRVRKAITAGYFYHTARLTRSG-Y 959
Query: 489 LTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 547
TVK Q V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 960 RTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAK 1019
Query: 548 NFPQCEAKRVLERLYRKREK 567
AK++ +++ + RE+
Sbjct: 1020 ELEDPHAKKMPKKIGKTREE 1039
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 581 bits (1497), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/560 (50%), Positives = 392/560 (70%), Gaps = 18/560 (3%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY+TDGMLLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SA
Sbjct: 497 RYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASA 556
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++ +F +F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILV
Sbjct: 557 TMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILV 616
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FLTG+EEIE AC + +G ++ + V+P+Y+ LP MQ +IF+P PP +
Sbjct: 617 FLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA------ 670
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+VV+TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRA
Sbjct: 671 -RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRA 729
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR GKCFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP
Sbjct: 730 GRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPY 789
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ ALE L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AM
Sbjct: 790 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 849
Query: 372 LSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
LSV N F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV R
Sbjct: 850 LSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFR 909
Query: 431 ALKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 488
+++ A +VR+QL ++ R + L C D Y+ +RKA+ AGYF A L R+G Y
Sbjct: 910 SMRRARDVREQLEGLLERVEVGLSSCQGD------YIRVRKAITAGYFYHTARLTRSG-Y 962
Query: 489 LTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 547
TVK Q V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 963 RTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAK 1022
Query: 548 NFPQCEAKRVLERLYRKREK 567
AK++ +++ + RE+
Sbjct: 1023 ELEDPHAKKMPKKIGKTREE 1042
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 580 bits (1494), Expect = e-164, Method: Compositional matrix adjust.
Identities = 282/560 (50%), Positives = 391/560 (69%), Gaps = 18/560 (3%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY+TDGMLLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SA
Sbjct: 498 RYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASA 557
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL+ +F +F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILV
Sbjct: 558 TLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILV 617
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FLTG+EEIE AC + +G ++ + V+P+Y+ LP MQ +IF+P PP +
Sbjct: 618 FLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA------ 671
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+VV+TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRA
Sbjct: 672 -RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRA 730
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR GKCFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP
Sbjct: 731 GRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPY 790
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETL+ ALE L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AM
Sbjct: 791 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 850
Query: 372 LSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
LSV N F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV R
Sbjct: 851 LSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFR 910
Query: 431 ALKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 488
+++ A +VR+QL ++ R + L C D Y+ +RKA+ AGYF A L R+G Y
Sbjct: 911 SMRRARDVREQLEGLLERVEVGLSSCQGD------YIRVRKAITAGYFYHTARLTRSG-Y 963
Query: 489 LTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 547
TVK Q V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 964 RTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAK 1023
Query: 548 NFPQCEAKRVLERLYRKREK 567
AK++ ++ + RE+
Sbjct: 1024 ELEDPHAKKMPKKTGKTREE 1043
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 576 bits (1485), Expect = e-163, Method: Compositional matrix adjust.
Identities = 270/540 (50%), Positives = 388/540 (71%), Gaps = 16/540 (2%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + DP L Y +I+LDEAHERT+ TDVLFGLLK + RP+LKL++ SA
Sbjct: 634 KYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSA 693
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL++ KF YF AP+ +PGR PVEI YT+EPE DYLEAA TV+QIH+ EP GD+LV
Sbjct: 694 TLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLV 753
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FLTG+EEI+ +C + + + +MG V + ++P+Y LP MQ +IF+PAP
Sbjct: 754 FLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGK------ 807
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETSLTIDGI YV+DPGF KQK+YNP+ ++SL+V+PIS+A+A QRSGRA
Sbjct: 808 -RKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRA 866
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE++F +++ P PEI R+NLA+T+L LK +GI++L+ FDFMD P
Sbjct: 867 GRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPL 926
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
++++ AL L+ L ALD DG LT++G +M+EFPL+P +SK+L+ S CS E+L+I AM
Sbjct: 927 DSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAM 986
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
L+V N F RP+E Q AD+ KA+F +GDHLTLL VY+++K ++ WC++NF+ R+
Sbjct: 987 LNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRS 1046
Query: 432 LKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
+K A ++R+QL+ IM R L + C D + ++KA+ +G+F A + Y
Sbjct: 1047 MKRAQDIRKQLLGIMDRHKLLMVSCGRDVS------RVQKAICSGFFRNAAKRDPQEGYR 1100
Query: 490 TVKDNQVVHLHPSN-CLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
T+ D Q V++HPS+ C +PEWV+Y+E V+T++ ++R VT + +WL++ AP ++ + +
Sbjct: 1101 TLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGD 1160
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 558 bits (1438), Expect = e-158, Method: Compositional matrix adjust.
Identities = 272/536 (50%), Positives = 375/536 (69%), Gaps = 15/536 (2%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE + +P L Y V+++DEAHERTL TD+LFGL+K++ + R DLKL++ SA
Sbjct: 459 KYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSA 518
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDIL 130
TL+AEKF +F AP+ ++PGR PV+I+YTQ PE DY++AAI T++QIH+ +P GDIL
Sbjct: 519 TLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDIL 578
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGP 190
VFLTG+EEIE + + +G ++ + +P+Y+ LP +Q KIFEP P +
Sbjct: 579 VFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDA----- 633
Query: 191 PGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+V++TNIAETS+TIDGI YVIDPGF+KQ ++ R VE L V ISKA+A+QR+GR
Sbjct: 634 --RKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGR 691
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT PGKCFRLYT ++ ++L+ Q PEI R+NL N VL LK LGI DLVHFDF+DPP
Sbjct: 692 AGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPP 751
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
ETL+ ALE L LGAL+ G LT++G +M+EFP DP MSKM++ S KY CS EI++I+A
Sbjct: 752 QETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAA 811
Query: 371 MLSV-PNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNH 429
MLS F RP+ AD A+ F GDH+TL+NVY+ +++++ WC +N+V H
Sbjct: 812 MLSCNAAVFYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQH 871
Query: 430 RALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
R +K A +VR QLV ++ R ++ S+ + IRKA+ AGYF V+ L+ TG Y
Sbjct: 872 RTMKRARDVRDQLVGLLERVEIETKSSTDT-----IKIRKAITAGYFYNVSKLDNTGHYK 926
Query: 490 TVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
TVK H HP++CL + P WV+Y E V TS+ F+R ++++ WL+++APHYY
Sbjct: 927 TVKHKHTTHPHPNSCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYY 982
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 555 bits (1431), Expect = e-157, Method: Compositional matrix adjust.
Identities = 269/545 (49%), Positives = 387/545 (71%), Gaps = 13/545 (2%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+YLTDGMLLRE +T+P L Y VI++DEAHERTL TD+LFGL+K++ + RPDLK+++ SA
Sbjct: 513 KYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSA 572
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++AEKF YF AP+ VPGR +PV+I+YT +PE +Y++AAI T++QIH +P+GDILV
Sbjct: 573 TIDAEKFSAYFDEAPVFYVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILV 632
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FLTG++EIE + + +G ++ + + P+Y+ LP +Q KIF+P PP +
Sbjct: 633 FLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGA------ 686
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++TNIAETS+TIDG+ +VID GF KQ +YNPR +ESL+ P S+ASA QR+GRA
Sbjct: 687 -RKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRA 745
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR PGKCFRLYT +++NN+L T PEI R+NL N VL LK LGI++L+ FDFMD P P
Sbjct: 746 GRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPP 805
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
ETLMR+LE+L LGAL++ G LT++G +M+EFP DP +SK L+ S KY C E+LSI +M
Sbjct: 806 ETLMRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSM 865
Query: 372 LS-VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
L + F RP++ AD+A+A F GDHLTLL++++ + + +W +NF+ ++
Sbjct: 866 LGEASSLFYRPKDKIMEADKARANFTQPGGDHLTLLHIWNEWVDTDFSYNWARENFLQYK 925
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTG-QYL 489
+L A +VR QL + R ++L +N S D I+KA+ AGYF A L+R+G Y
Sbjct: 926 SLCRARDVRDQLANLCERVEIELVTNSSESLD---PIKKAITAGYFSNAARLDRSGDSYR 982
Query: 490 TVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 548
TVK NQ V++HPS+ + + KP+ +IY E VLT++ + R +T+++ EWL++I+PHY+ N
Sbjct: 983 TVKSNQTVYIHPSSSVAEKKPKVIIYFELVLTTKEYCRQITEIQPEWLLEISPHYFKPEN 1042
Query: 549 FPQCE 553
+ +
Sbjct: 1043 IEELQ 1047
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 545 bits (1404), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/536 (49%), Positives = 366/536 (68%), Gaps = 16/536 (2%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGML REA+ DP + +Y VI+LDEAHERT+ATDVLF LLK+ RP+LK++V SA
Sbjct: 577 KYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSA 636
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL + KF YF P++ +PG+ PVE+ Y+Q P+ DY+EAA+ V+ IH+ E GDILV
Sbjct: 637 TLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILV 696
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FLTG+EEI+ C + + +GD +G + ++P+YS LP +Q KIFEP P S
Sbjct: 697 FLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGS------ 750
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V +TNIAETS+TIDGI YV+DPGFAK +YN R +E L+VSPIS+A A+QR GRA
Sbjct: 751 -RKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRA 809
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PGKC+RLYTE +F N++ T PEI R NL++T+L LK +GI+DL+ FDFMDPP
Sbjct: 810 GRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPK 869
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
++ AL L +L +LDD+G LT +G++MS FP+DP +S+ L+ S CS+EI++I +M
Sbjct: 870 NLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISM 929
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSV N F RP++ Q AD KA+F H GDHLTLLNVY ++Q N +C NF++ R
Sbjct: 930 LSVQNVFYRPKDRQLEADSKKAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRH 989
Query: 432 LKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
LK A +V+ Q+ I + LKL C +D + IRK ++G+FM A + Y
Sbjct: 990 LKRARDVKSQISMIFKKIGLKLISCHSDPDL------IRKTFVSGFFMNAAKRDSQVGYK 1043
Query: 490 TVKDNQVVHLHPSNCLDHKP-EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 544
T+ V +HPS+ L K E+V+Y+ VLTSR ++ VT + +WL+++APH+Y
Sbjct: 1044 TINGGTEVGIHPSSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFY 1099
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 514 bits (1323), Expect = e-145, Method: Compositional matrix adjust.
Identities = 260/574 (45%), Positives = 378/574 (65%), Gaps = 23/574 (4%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE + D L++Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SA
Sbjct: 535 KYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSA 594
Query: 72 TLEAEKFQGYFYG-APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDIL 130
T++A+KF +F G P +PGR PVE+F+ + P DY++AA++ V IH+ GDIL
Sbjct: 595 TMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDIL 654
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGP 190
+F+ G+E+IE C I +++ + D+ P+ V+P+YS LP +Q KIF+ AP GG
Sbjct: 655 IFMPGQEDIECTCEMIKEKLGEL-DEAPPLAVLPIYSQLPSDLQAKIFQRAP-----GGM 708
Query: 191 PGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK +V+TNIAETSLT+DGI++VIDPGF K KVYNPR+ +++L + P+S+ASA+QR+GR
Sbjct: 709 --RKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGR 766
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGRT PG+C+RLYTE+ F ++L T PEI R+NLAN VL LK LG+DDL+ F FMD P
Sbjct: 767 AGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPP 826
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 370
+ ++ ++ L LGALD+ G LT MG KM EFPLDP +SKML+ S + CS+E+L+I +
Sbjct: 827 QDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVS 886
Query: 371 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHR 430
MLSVP F RP+ ++ AD K +F + DHLT LNVY ++ + WC DN+++ +
Sbjct: 887 MLSVPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVK 946
Query: 431 ALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 490
ALK VR QL IM L L SN + +RK + + YF A L+ G+Y+
Sbjct: 947 ALKKVREVRAQLKEIMQDLKLPLISNGSE----WDIVRKCICSAYFHNAARLKGIGEYVN 1002
Query: 491 VKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 547
V+ LHP++ L P++V+Y+E ++T++ +++ VT V WL ++ P +Y +
Sbjct: 1003 VRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIK 1062
Query: 548 NFPQC------EAKRVLERLYRK-REKERENNRK 574
Q E+ R +E + + RE ++E R+
Sbjct: 1063 ESKQSRKELKMESVRTVETMEAEMREAQKEMERR 1096
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/540 (45%), Positives = 364/540 (67%), Gaps = 19/540 (3%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ + L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SA
Sbjct: 626 KYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSA 685
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++AEKF +F P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+
Sbjct: 686 TMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILI 745
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
F+ G+E+IE +I + + + + + V+P+YS LP +Q KIF+ AP
Sbjct: 746 FMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV------ 798
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK +V+TNIAETSLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRA
Sbjct: 799 -RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRA 857
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PG+CFRLYT+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP
Sbjct: 858 GRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPE 917
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+ ++ ++ L LGALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +M
Sbjct: 918 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 977
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVP F RP+ ++ +D+ + +F + DHLT LNVY +K NN WC D+F++ +A
Sbjct: 978 LSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKA 1037
Query: 432 LKSADNVRQQLVRIMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
++ VR QL IM R +L C D++ +RK + A YF Q A L+ G+Y+
Sbjct: 1038 MRKVREVRAQLKDIMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYV 1091
Query: 490 TVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 546
++ HLHP++ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 1092 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1151
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 507 bits (1306), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/540 (45%), Positives = 364/540 (67%), Gaps = 19/540 (3%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ + L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SA
Sbjct: 626 KYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSA 685
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T++AEKF +F P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+
Sbjct: 686 TMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILI 745
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
F+ G+E+IE +I + + + + + V+P+YS LP +Q KIF+ AP
Sbjct: 746 FMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV------ 798
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK +V+TNIAETSLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRA
Sbjct: 799 -RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRA 857
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PG+CFRLYT+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP
Sbjct: 858 GRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPE 917
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+ ++ ++ L LGALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +M
Sbjct: 918 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 977
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVP F RP+ ++ +D+ + +F + DHL+ LNVY +K NN WC D+F++ +A
Sbjct: 978 LSVPAIFYRPKGREEESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKA 1037
Query: 432 LKSADNVRQQLVRIMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 489
++ VR QL IM R +L C D++ +RK + A YF Q A L+ G+Y+
Sbjct: 1038 MRKVREVRAQLKDIMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYV 1091
Query: 490 TVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 546
++ HLHP++ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 1092 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1151
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 497 bits (1280), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/538 (45%), Positives = 367/538 (68%), Gaps = 16/538 (2%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LLRE++ LE+Y VI++DEAHER+L TD+L GLLK+VL R D+KL+V SA
Sbjct: 586 KYMTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSA 645
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
T+ ++KF +F GAP +PGR +PV+I + + P DY+EAA+R V+QIH+ +P+GDILV
Sbjct: 646 TMNSQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILV 705
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
F+TG+E+IE C I + + D + ++P+YS +P +Q KIF+ A P
Sbjct: 706 FMTGQEDIEATCEIIADRLNQLHD-APRLSILPIYSQMPADLQAKIFDSAEPGV------ 758
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+VV+TNIAETSLT+ GI YV+D G+ K K+YN ++ +++L V+PIS+A+A+QR+GRA
Sbjct: 759 -RKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRA 817
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GRT PG +RLYTE ++ ++ T PEI R+NL+NTVL LK LG++++ FDFMD P
Sbjct: 818 GRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPN 877
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
+TLM +L L LGALD+ G LT +G+KMS FP+DP +SK+++ + Y C+ EI++I +M
Sbjct: 878 DTLMASLYELWTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSM 937
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 431
LSVP+ F RP+E + +D A+ +F + DHL LLN+Y +++N SWC +F++ +
Sbjct: 938 LSVPSVFYRPKERAEESDAAREKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKT 997
Query: 432 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 491
LK A ++RQQLV IM++ + L S D+ + +R+ + + YF Q A + G+Y+ +
Sbjct: 998 LKRARDIRQQLVEIMSKQKISLES----VSDWDI-VRRVLCSAYFHQAACAKGIGEYVHL 1052
Query: 492 KDNQVVHLHPSNC---LDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 546
+ HLH ++ L + P++VIY+E VLTS+ ++ VT V WL + YY +
Sbjct: 1053 RSGMPCHLHVTSSLYGLGYLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSV 1110
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 496 bits (1276), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/561 (43%), Positives = 369/561 (65%), Gaps = 29/561 (5%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
++LTDGML+RE M DPLL +Y VI+LDEAHERTL TD+ GLLK++ K R DL+L+V SA
Sbjct: 150 KFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASA 209
Query: 72 TLEAEKFQGYFY----------GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
TL+A+KF+ +F ++ V GR PV+IFY Q P DY+++ + TVV+IH
Sbjct: 210 TLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIH 269
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVG---PVKVVPLYSTLPPAMQQKIF 178
E GD+L FLTG+EE+E + ++ + + G ++V+P+Y+ LP Q K+F
Sbjct: 270 QTEGDGDVLAFLTGQEEVETVVSMLIEQARALA-RTGMKRHLRVLPMYAGLPSFEQMKVF 328
Query: 179 EPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 238
E RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V P
Sbjct: 329 ERVSRSV-------RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVP 381
Query: 239 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGID 298
+S+ASA+QR+GR GR++ GKC+RLYTE++F+ L T PE+ RSNLA +L LK LGID
Sbjct: 382 VSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGID 440
Query: 299 DLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESP 357
+++ F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES
Sbjct: 441 NVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESG 500
Query: 358 KYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNE 417
+ CS EILSI+AM+ + N FV P + A +F +GDHLT+LN+Y A+ ++N+
Sbjct: 501 NFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNK 560
Query: 418 DPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFM 477
D WC ++F+N++ L A VR+QL +++ +F + S++ + + + +++G+F
Sbjct: 561 DSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPD----LVLRCIVSGFFA 616
Query: 478 QVAHLERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYNEYVLTSRNFIRTVTDVRGEW 535
A TG Y T++D+ +H+HP++ L + P WVIYNE + TS+ ++R VT + W
Sbjct: 617 NAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAW 676
Query: 536 LIDIAPHYYDLSNFPQCEAKR 556
L+++APH+Y +AKR
Sbjct: 677 LLELAPHFYQQGTHLSLKAKR 697
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 491 bits (1265), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/549 (44%), Positives = 365/549 (66%), Gaps = 29/549 (5%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
++LTDGML+RE M DPLL +Y VI+LDEAHERTL TD+ GLLK++ K R DL+L+V SA
Sbjct: 150 KFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASA 209
Query: 72 TLEAEKFQGYFY----------GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
TL+A+KF+ +F ++ V GR PV+IFY Q P DY+++ + TVV+IH
Sbjct: 210 TLDADKFRDFFNQNETSDPARDTCVILTVGGRTFPVDIFYLQSPVPDYIKSTVETVVKIH 269
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVG---PVKVVPLYSTLPPAMQQKIF 178
E GDIL FLTG+EE+E + ++ + + G ++V+P+Y+ LP Q K+F
Sbjct: 270 QTEGDGDILAFLTGQEEVETVVSMLIEQARALA-RTGMKRHLRVLPMYAGLPSFEQMKVF 328
Query: 179 EPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 238
E RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V P
Sbjct: 329 ERVSRSV-------RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVP 381
Query: 239 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGID 298
+S+ASA+QR+GR GR++ GKC+RLYTE++F+ L T PE+ RSNLA +L LK LGID
Sbjct: 382 VSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGID 440
Query: 299 DLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESP 357
+++ F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES
Sbjct: 441 NVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESG 500
Query: 358 KYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNE 417
+ CS EILSI+AM+ + N FV P + A +F +GDHLT+LNVY A+ ++N+
Sbjct: 501 NFGCSQEILSIAAMMQIQNIFVVPPNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHNK 560
Query: 418 DPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFM 477
+ WC ++F+N++ L A VR+QL +++ +F + S++ + + + +++G+F
Sbjct: 561 NSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEGDPDP----VLRCIVSGFFA 616
Query: 478 QVAHLERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYNEYVLTSRNFIRTVTDVRGEW 535
A TG Y T++D+ +H+HP++ L + P WVIYNE + TS+ ++R VT + W
Sbjct: 617 NAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAW 676
Query: 536 LIDIAPHYY 544
L+++APH+Y
Sbjct: 677 LLELAPHFY 685
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/536 (43%), Positives = 351/536 (65%), Gaps = 16/536 (2%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+YLTDGMLLRE + DP+L +Y ++LDEAHERTL TD+L G +K+++K RP L++++MSA
Sbjct: 190 KYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSA 249
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
TL AE+F +F GA + + GR +PV+I YT PE DYL+A +RT+ Q+H P GDILV
Sbjct: 250 TLNAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILV 309
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FLTG++EIE I + + ++ PL+++LP Q ++F PA
Sbjct: 310 FLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANH------ 363
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V+STNIAETS+TI GI YVID G AK K +N ++ +ESL V PIS+++A QRSGRA
Sbjct: 364 -RKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRA 422
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
GR G+C+R+YTE F+ L +T PEI R +L+ VLTLK G +D+++F +MDPP+
Sbjct: 423 GREAAGQCYRIYTEADFDK-LPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSK 481
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
E L+RALE L +GALDD+G++ ++G +MS PL P +++ ++ + ++NC +E++ + +
Sbjct: 482 EGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSC 541
Query: 372 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP--SWCYDNFVNH 429
LS + F+ P+E + A EA+ +F H +GD LT LN Y +++ D WC NF+N
Sbjct: 542 LSTDSMFLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQNFINR 601
Query: 430 RALKSADNVRQQLVRIMARFNLKLCSN-DFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 488
RALK+ ++R+QL + +L S+ + NS N+ + L+GY A L G Y
Sbjct: 602 RALKTILDIRKQLREHCLKDGWELNSSPEVNSE----NLLLSFLSGYITNTALLHPDGSY 657
Query: 489 LTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 543
T+ NQ + +HPS+ L K E ++Y+E V T+++++R V+ +R WL +APHY
Sbjct: 658 RTIIGNQTISIHPSSSLFGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHY 713
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/562 (41%), Positives = 349/562 (62%), Gaps = 31/562 (5%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+++TDG+LLRE + DPLL +Y +I++DEAHER+ TD+L GLL+++++ R DL+++V SA
Sbjct: 172 KFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSA 231
Query: 72 TLEAEKFQGYFY----------GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 121
TL+AE F+ +F A ++ V GR HPV + +T+ DY ++A+ TV+ IH
Sbjct: 232 TLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIH 291
Query: 122 MCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPA 181
E GDILVFLTG++E+ED C K+ +E+ + VVP Y LP Q K F+
Sbjct: 292 KHENPGDILVFLTGQDEVEDVCEKL-RELAGNLKNCDRLWVVPCYGALPAREQMKAFDST 350
Query: 182 PPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISK 241
P + RK+VV+TNIAE S+TI GI YVID G+ K + + VE+L+ +SK
Sbjct: 351 PHGT-------RKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSK 403
Query: 242 ASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLV 301
ASA QR+GRAGR +PGKC+RLY E F T PEI R +A+T+L LK LG+ ++
Sbjct: 404 ASAEQRAGRAGRIRPGKCYRLYPESEFER-FAEGTVPEIQRCQMASTILQLKALGVQNVH 462
Query: 302 HFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYN 360
F ++ PP ++ LE+L LGA+D+ LT +G +M+EFPL P SK L++S ++
Sbjct: 463 RFHYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFG 522
Query: 361 CSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS 420
CS E+++I AM+ + + F+ P + AD + +F +GDH+T+LNV+ + +N
Sbjct: 523 CSTEMVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKK 582
Query: 421 WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSND--FNSRDYYVNIRKAMLAGYFMQ 478
WC D+FVN+R L ADNVR QLVR++ RF ++ S+ N + NIR+ ++ G+F Q
Sbjct: 583 WCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSE---NIRQCLVTGFFSQ 639
Query: 479 VAHLERTGQYLTVKDNQVVHLHPSNCLDHK---PEWVIYNEYVLTSRNFIRTVTDVRGEW 535
A TG+Y+TVK++ +++ + + K P+WVI+ E + S IR VT + EW
Sbjct: 640 AAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVMQDS---IRDVTVIEPEW 696
Query: 536 LIDIAPHYYDLSNFPQCEAKRV 557
L ++APHYY+ + KR+
Sbjct: 697 LYELAPHYYEFGTEGELAEKRM 718
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/547 (42%), Positives = 340/547 (62%), Gaps = 30/547 (5%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL-----KL 66
++LTDGMLLREA++D LL +Y ++LDEAHERT+ TDVLFG++K K R +L K+
Sbjct: 168 KFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKV 227
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS 126
+VMSAT++ + F YF GAP++ + GR HP+++FYT++P+ DYL AA+ +V QIH PS
Sbjct: 228 IVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPS 287
Query: 127 G-DILVFLTGEEEIE---DACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAP 182
DILVFLTG+EEIE CR I K ++ D + V+PLY++LP A Q ++F+
Sbjct: 288 SQDILVFLTGQEEIEAMSKTCRDIAK---HLPDGCPAMLVLPLYASLPYAQQLRVFQ--- 341
Query: 183 PPSKEGGPPG-RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISK 241
G P G RK+++STNIAETS+TI GI YV+D G K K YNP +E L V +SK
Sbjct: 342 -----GAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 396
Query: 242 ASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLV 301
A QR+GRAGR G C+RLYTE F T PEI R NLA+ +L L + + +++
Sbjct: 397 TQAWQRTGRAGREDSGICYRLYTEDEFEK-FDKMTVPEIQRCNLASVMLQLLAMKVPNVL 455
Query: 302 HFDFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFPLDPQMSKMLVESPK 358
FDFM P+P+ + A+ L+ LGAL DD LT MG KM+ FPL+P+ +K ++ SPK
Sbjct: 456 TFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPK 515
Query: 359 YNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNED 418
++C+ EIL+I ++LSV + P ++ + +F +GDH+TLLN+Y +K +
Sbjct: 516 FHCTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKNLGGN 575
Query: 419 PSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQ 478
WC +NFVN + + VR QL I + ++ + S SR ++R+ + FM
Sbjct: 576 KDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIAS----SRGDVESVRRCLAHSLFMS 631
Query: 479 VAHLERTGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDVRGEWLI 537
A L+ G Y T +Q V +HPS+ L H KP V+Y E + T++ ++R + + +WL
Sbjct: 632 TAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLY 691
Query: 538 DIAPHYY 544
+ AP Y+
Sbjct: 692 EAAPEYF 698
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 434 bits (1117), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/550 (42%), Positives = 355/550 (64%), Gaps = 26/550 (4%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+++TDG+LLRE + D L++Y +++DEAHER+L TD+L G K +L R DLKL++ SA
Sbjct: 447 KFVTDGILLRETLLDDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSA 506
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCE--PSGDI 129
T+ A+KF +F AP +PGR PV+ YT P +DY+EAA+ V+IH+ SGDI
Sbjct: 507 TMNAKKFSAFFGNAPQFTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDI 566
Query: 130 LVFLTGEEEIEDACRKITKEI---------TNMGDQVGPVKVVPLYSTLPPAMQQKIFEP 180
L+F+TG+E+IE + ++ T +++ ++++P+YS LP +Q KIF+
Sbjct: 567 LIFMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQ- 625
Query: 181 APPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPIS 240
+ RKI+++TNIAETSLTI GI YVID G++K KVYNP++ ++SL+++PIS
Sbjct: 626 ------DLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPIS 679
Query: 241 KASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGI-DD 299
KA+A QRSGRAGRT PG +RLYTE +F D+ QT PEI R+NL+NT+L LK L + D+
Sbjct: 680 KANADQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDE 739
Query: 300 LVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKY 359
L F F+D P +T + +L L ++GA+D G LT +G +M++FPL P +SK+L+ + +
Sbjct: 740 LSKFPFIDKPPLQTFLSSLYELWFIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRN 799
Query: 360 NCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP 419
CS+E+L+I +MLSVP F RP+E QK AD A+ +F DHLTLLNV+ ++ NN
Sbjct: 800 GCSDEMLTIVSMLSVPQVFYRPKERQKEADIARNKFFIAKSDHLTLLNVFEQWRANNFSS 859
Query: 420 SWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQV 479
WC +FV +++L A ++R QL+ I+ + + S + +D+ + I+K + +G+ Q
Sbjct: 860 HWCNKHFVQYKSLVRARDIRDQLLTILKSQKIPVIS---SGKDWDI-IKKCICSGFAHQA 915
Query: 480 AHLERTGQYLTVKDNQVVHLHPSNC---LDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWL 536
A + Y+ +K V LHP++ L P +V+Y+E ++TS+ +I VT V WL
Sbjct: 916 AKITGLRNYVHLKTGVSVQLHPTSALHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWL 975
Query: 537 IDIAPHYYDL 546
++ YD+
Sbjct: 976 MEYGGLLYDI 985
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/547 (42%), Positives = 338/547 (61%), Gaps = 30/547 (5%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL-----KL 66
++LTDGMLLREA++D LL +Y ++LDEAHERT+ TDVLFG++K K R +L K+
Sbjct: 159 KFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKV 218
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP- 125
+VMSAT++ + F YF AP++ + GR HP++IFYT++P++DYL AA+ +V QIH P
Sbjct: 219 IVMSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPA 278
Query: 126 SGDILVFLTGEEEIE---DACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAP 182
S DILVFLTG+EEIE CR I + ++ D + V+PLY++LP + Q ++F+
Sbjct: 279 SQDILVFLTGQEEIEAMSKTCRDIAR---HLPDGCPSMLVLPLYASLPYSQQLRVFQ--- 332
Query: 183 PPSKEGGPPG-RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISK 241
G P G RK+++STNIAETS+TI GI YV+D G K K YNP +E L V +SK
Sbjct: 333 -----GAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 387
Query: 242 ASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLV 301
A QR+GRAGR G C+RLYTE F + T PEI R NLA+ +L L + + +++
Sbjct: 388 TQAWQRTGRAGREDSGICYRLYTEDEFEK-FEKMTVPEIQRCNLASVILQLLAMKVPNVL 446
Query: 302 HFDFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFPLDPQMSKMLVESPK 358
FDFM P+P+ + A+ L+ LGAL DD LT +G KM+ FPL+P+ +K ++ S K
Sbjct: 447 TFDFMSKPSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSK 506
Query: 359 YNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNED 418
++C+ EIL+I ++LSV + P + + +F +GDH+TLLN+Y +K +
Sbjct: 507 FHCTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHITLLNIYRTFKNIGGN 566
Query: 419 PSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQ 478
WC +NFVN + + VR QL I + ++ + S SR ++R+ M FM
Sbjct: 567 KDWCKENFVNSKNMLLVAEVRAQLREICLKMSMPIMS----SRGDMESVRRCMAHSLFMN 622
Query: 479 VAHLERTGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDVRGEWLI 537
A L+ G Y T +Q V +HPS+ L H KP V+Y + T++ ++R + V EWL
Sbjct: 623 TAELQTDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLY 682
Query: 538 DIAPHYY 544
+ AP Y+
Sbjct: 683 EAAPDYF 689
>sp|Q7L7V1|DHX32_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Homo sapiens GN=DHX32 PE=1 SV=1
Length = 743
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/562 (40%), Positives = 349/562 (62%), Gaps = 19/562 (3%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY TD ML RE M++P L Y VI+LD+ HER++ATDVL GLLK+VL RP+LKL++ S+
Sbjct: 159 RYCTDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSS 218
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
K Y+ P+++V + HPVE+ Y E ++D E+ +R + +IH GDI+V
Sbjct: 219 PHLISKLNSYYGNVPVIEVKNK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVV 277
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FL E++IE C + + +N+ +G + VVPLY P + +F+P K
Sbjct: 278 FLACEQDIEKVCETVYQG-SNLNPDLGELVVVPLY----PKEKCSLFKPLDETEKRCQVY 332
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
R++V++T+ E + + + +VID G ++KVYNPR+R SL++ PIS++ A R
Sbjct: 333 QRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQIL 392
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
G + GK F LYTE+ + D+ P E+ +NL + VL +K++ I L H DFM+ PAP
Sbjct: 393 GSSSSGKFFCLYTEEFASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAP 452
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
E+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C +E+L+I+AM
Sbjct: 453 ESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAM 512
Query: 372 LSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS-------WCY 423
++ PNCF P A++AA F H +GDH TL+++Y AY+ + S WC
Sbjct: 513 VTAPNCFSHVPHGAEEAALTCWKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCR 572
Query: 424 DNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-L 482
D F+N AL+ AD +R +L+ I+ R L F S++ +NI+KA+L+GYFMQ+A +
Sbjct: 573 DYFLNCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDV 632
Query: 483 ERTGQYLTVKDNQVVHLHP---SNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 539
+ +G YL + QV LHP + PEWV+++++ ++ N+IR +++ E + +
Sbjct: 633 DGSGNYLMLTHKQVAQLHPLSGYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQL 692
Query: 540 APHYYDLSNFPQCEAKRVLERL 561
P YY SN P E+K +L+++
Sbjct: 693 VPQYY-FSNLPPSESKDILQQV 713
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/558 (41%), Positives = 340/558 (60%), Gaps = 39/558 (6%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDGMLLRE +TD L +Y I++DEAHERTLATD+L GLLK++L RP LKL++ SA
Sbjct: 320 KYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSA 379
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDIL 130
T+ A+KF +F P+ VPGR +PV+I YT +PE +Y+ AAI T+ QIH + GDIL
Sbjct: 380 TMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDIL 439
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGP 190
VFLTG+EEIE K+ + ++ +G + + + P+Y+ LP Q KIF+P P
Sbjct: 440 VFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENC----- 494
Query: 191 PGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 250
RK+V++TNIAETSLTIDGI YVIDPGF K+ Y P + LL P S+AS QR+GR
Sbjct: 495 --RKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGR 552
Query: 251 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 310
AGR PGKCFR++T+ S+ ++L+ PEI R+NL+NTVL L LG+ DL+ F MD P+
Sbjct: 553 AGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPS 612
Query: 311 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKY-NCSN---EIL 366
TL ++LE L LGAL+ G +T +G+ M EFP +P+ +K+L + + C E L
Sbjct: 613 IPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECL 672
Query: 367 SISAML-SVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDN 425
+I +ML P+ F+ QK D A + ++ DH+ L +++ ++ + SWC D+
Sbjct: 673 TIVSMLHETPSLFI----GQK-RDAAASVLSEVESDHILYLEIFNQWRNSKFSRSWCQDH 727
Query: 426 FVNHRALKSADNVRQQLVRIMARFNLKLCSND-----FNSRDYYVNIR--KAMLAGYFMQ 478
+ + + N+R QL R + L + ND + Y+N R + ++G+ M
Sbjct: 728 KIQFKTMLRVRNIRNQLFRCSEKVGL-VEKNDQARMKIGNIAGYINARITRCFISGFPMN 786
Query: 479 VAHLERTGQYLTVKDNQV---VHLHPSNCL--DHK------PEWVIYNEYVLTSRNFIRT 527
+ L TG Y T+ + V +HP++ L +HK ++V+Y + +LTS+ FIR
Sbjct: 787 IVQLGPTG-YQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRD 845
Query: 528 VTDV-RGEWLIDIAPHYY 544
+ + EWLID+ P +
Sbjct: 846 CLVIPKEEWLIDMVPQIF 863
>sp|Q8BZS9|DHX32_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Mus musculus GN=Dhx32 PE=2 SV=2
Length = 744
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/561 (40%), Positives = 350/561 (62%), Gaps = 18/561 (3%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY TD ML RE M++P L Y VI+LD+ HER+LATDVL GLLK+VL RP+LKL+V +
Sbjct: 159 RYCTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCS 218
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
L K Y+ P+++V + HPVE+ Y ++D E+ IR + +IH GD++V
Sbjct: 219 PLLTSKLSSYYGDVPVIEVRNK-HPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVV 277
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FL E++IE + +E +N+ VG + V+PLY P + +F P K
Sbjct: 278 FLACEQDIEKTYELVCQEGSNLNPDVGDLVVIPLY----PKEKCSLFRPVDETEKRCQVY 333
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
R++V++T+ E+ + + +VID G +++VYNPR+R SL++ PIS++ A R
Sbjct: 334 QRRVVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLL 393
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
G + GK F LYTE+ + D++P E+ +NL + VL +K++ I L DFM+ PAP
Sbjct: 394 GSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAP 453
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
E+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C +E+L+I+AM
Sbjct: 454 ESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAM 513
Query: 372 LSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS-------WCY 423
++ P+CF+ P A++AA F H +GDH TL+NVY+AY+ + + WC+
Sbjct: 514 VTAPSCFLHVPHGAEEAAVTCWKTFLHPEGDHFTLINVYNAYQDTVLNSANEHCVEMWCH 573
Query: 424 DNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-L 482
D F++ AL+ AD +R +L+ I+ R L F S++ +NI+KA+L+GYFMQ+A +
Sbjct: 574 DCFLSCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQIARDV 633
Query: 483 ERTGQYLTVKDNQVVHLHP--SNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 539
+ +G YL + QV LHP S + K PEWV+++++ ++ N+IR + V E + +
Sbjct: 634 DGSGNYLMLTHKQVAQLHPLSSYSITKKMPEWVLFHQFSISENNYIRVASAVSPELFMQL 693
Query: 540 APHYYDLSNFPQCEAKRVLER 560
P YY SN P E+K +L++
Sbjct: 694 VPQYY-FSNLPPSESKDILQQ 713
>sp|Q5XH12|DHX32_XENLA Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Xenopus laevis GN=dhx32 PE=2 SV=1
Length = 748
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/561 (38%), Positives = 337/561 (60%), Gaps = 19/561 (3%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
RY TD ML RE M++PLL Y V+++D+ +ER ++TDVL LK + +RP+LK+V+++
Sbjct: 161 RYCTDEMLRREMMSNPLLSSYGVVIIDDVYERFVSTDVLLSFLKVIAVSRPELKVVIITC 220
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 131
+ Y+ APL++ H VE YT RDY +A+R + +IH + GDI+V
Sbjct: 221 PSLSGTLVSYYGNAPLVEAENT-HSVESVYTTSLPRDYFHSALRLLFEIHHTKEKGDIVV 279
Query: 132 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPP 191
FL EEEI+ A I +E +M ++G + + LY P + P P
Sbjct: 280 FLACEEEIKRAYEHIKQEALHMNPELGELMPIALY----PHQSISDYIPYEELDDNSKNP 335
Query: 192 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 251
RK+V++T++ E+ + + I +VID G K+KVYN R+R ESL+ PISK A R
Sbjct: 336 KRKVVLTTSLGESLIWMKNIFFVIDVGIEKRKVYNTRIRAESLVTQPISKVRAKMRKHIL 395
Query: 252 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 311
+ GK F LY E F ++++P ++ NL + VL LK++ I L H DF++ P P
Sbjct: 396 SSSSEGKLFCLYPE-DFAHEMKPFLTAKVEECNLISMVLFLKRMDIAGLAHCDFINRPDP 454
Query: 312 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 371
E+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ + +++C +E+L+++AM
Sbjct: 455 ESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILAACEFDCVDEMLTLAAM 514
Query: 372 LSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ---NNED----PSWCY 423
++ PNCF+ P EA++ K +F H +GDH TL+N+Y+ Y+Q NN WC
Sbjct: 515 VTAPNCFIDLPPEAKELDLIGKGKFFHPEGDHFTLINIYNEYEQMKRNNASQYDVEKWCQ 574
Query: 424 DNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-L 482
++ ++ AL+ A +R +L+ IM R L L F S + NI+K++L+GYFMQ+A +
Sbjct: 575 NHCLSFVALEMARAIRNELLDIMRRIELPLTGPAFGSDENVTNIKKSLLSGYFMQIARDV 634
Query: 483 ERTGQYLTVKDNQVVHLHPSN--CLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 539
+ G Y+ + QV LHP + C K PEWV+++E+ ++ R+ IR V+++ ++
Sbjct: 635 DGLGNYIMLTHKQVGQLHPDSGFCNSAKVPEWVLFHEFSVSERSCIRIVSEISPNLFMEF 694
Query: 540 APHYYDLSNFPQCEAKRVLER 560
P YY SN P E K +L++
Sbjct: 695 VPPYY-FSNLPPSETKDLLQQ 714
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/534 (39%), Positives = 327/534 (61%), Gaps = 23/534 (4%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+Y+TDG+LL E DPLLERY +++LDE HERTL+TD+L G+LK +L+ R D +LV+ SA
Sbjct: 120 KYMTDGILLNEIFFDPLLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSA 179
Query: 72 TLEAEKFQGYFYGAPL--MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 129
+++A K +F + M + G+L PVE + Q+P +Y+++AI TV+ I+ P GDI
Sbjct: 180 SVDANKLSQFFGQDKVCTMSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDI 239
Query: 130 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGG 189
LVFL+G +EIE +KI + + + + +PL++ L Q ++F
Sbjct: 240 LVFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDF---- 295
Query: 190 PPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 249
RK++ STNIAETS+TIDGIVYV+D GF KQ++YNP R L+ PISK+SA QRSG
Sbjct: 296 ---RKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSG 352
Query: 250 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 309
RAGRT GK FRLYTEK++ + ++ + +IL +++ VL LK LG+ +++ F F P
Sbjct: 353 RAGRTMRGKVFRLYTEKAY-SLMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRP 411
Query: 310 APETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 368
LM ALE L LG LD+ GNLT+ +G ++S LD +SK L+ S ++ C++EILSI
Sbjct: 412 PTVHLMAALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSI 471
Query: 369 SAMLSVPNCFVRPREAQKA-ADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFV 427
+++L+ F P + K A A + F +GD +T LNV+ ++ N +D WC N++
Sbjct: 472 ASILTAGEVFYNPTSSSKNDAFVAHSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYL 531
Query: 428 NHRALKSADNVRQQLVRIMARFNL----KLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLE 483
N++ L+ A ++R LVR + +F++ +L S+D + I K +L G+ VAHL+
Sbjct: 532 NYQTLRQALDIRTHLVRFLNKFSIPTAQRLPSSDCS------KILKCLLDGFVRNVAHLQ 585
Query: 484 RTGQYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLT-SRNFIRTVTDVRGEWL 536
G Y T+ QV S + K W++Y+ V + ++ F++ ++ + WL
Sbjct: 586 NDGSYKTIGGKQVWLDSSSVLHEKKTPWIMYSSAVESETQIFVKNISKIESFWL 639
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 227/601 (37%), Positives = 351/601 (58%), Gaps = 54/601 (8%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKL 66
+Y+TDG LL+ + DP L ++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+
Sbjct: 147 KYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKV 206
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQI 120
VVMSAT+E K +F P+ +PGRL+PV E F RD Y++A ++ + I
Sbjct: 207 VVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDI 266
Query: 121 HMCEPSGDILVFLTGEEEIEDACRKITKEITNMG-------DQVGPVKVVPLYSTLPPAM 173
H+ E +GDILVFLTG+ EIE +C + + ++ + + ++P Y ++
Sbjct: 267 HLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQ 326
Query: 174 QQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVES 233
Q++IF P PP RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++
Sbjct: 327 QRRIFLPPPPGI-------RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 234 LLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 293
L V PISK+ A QRSGRAGRT GKCFR+Y++ +N + PEI R++L + VLTLK
Sbjct: 380 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 294 KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKML 353
L I D++ F ++DPP ++ AL+ L A+D G++T +G M EFPL P ++ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 354 VESPKYNCSNEILSISAMLSVPNCFVRP------REAQKAADEAKARFGHIDGDHLTLLN 407
+++ +C + +L I+AMLSV N F+RP +EA++ E A+ G + D TL
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAV 558
Query: 408 VYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDY---- 463
++ K + SWC ++++ R L SA V QL ++ + + +DF +
Sbjct: 559 IFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQ---SDFPKETFEGPK 615
Query: 464 YVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQV--VHLHPSNCL---DHKPEWVIYNEYV 518
+ +R+ + AGYF VA G+ D + VH+HPS+ L + K EW+I++E +
Sbjct: 616 HEVLRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVL 674
Query: 519 LTSRNFIRTVTDVRGEWLIDIAP-----HYYDLSNFPQCEAKRVLERLYRKREKERENNR 573
+T++ + R V +R EW+ D+ P + +DLS+ A+R + R+R +EN +
Sbjct: 675 VTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSV----ARREVREDARRRWTNKENVK 730
Query: 574 K 574
+
Sbjct: 731 Q 731
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/597 (37%), Positives = 347/597 (58%), Gaps = 46/597 (7%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRP-----DLKL 66
+Y+TDG LL+ + DP L ++ VI+LDEAHERTL TD+LFGLLK++ +++ LK+
Sbjct: 147 KYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKV 206
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQI 120
VVMSAT+E K +F P+ +PGRL+PV E F RD Y++A ++ + I
Sbjct: 207 VVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDI 266
Query: 121 HMCEPSGDILVFLTGEEEIEDACRKITKEITNMG-------DQVGPVKVVPLYSTLPPAM 173
H+ E +GDILVFLTG+ EIE +C + + ++ + + ++P Y ++
Sbjct: 267 HLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQ 326
Query: 174 QQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVES 233
Q++IF P PP RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++
Sbjct: 327 QRRIFLPPPPGI-------RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 234 LLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 293
L V PISK+ A QRSGRAGRT GKCFR+Y++ +N + PEI R++L + VLTLK
Sbjct: 380 LEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 294 KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKML 353
L I D++ F ++DPP ++ AL+ L A+D G++T +G M EFPL P ++ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 354 VESPKYNCSNEILSISAMLSVPNCFVRP------REAQKAADEAKARFGHIDGDHLTLLN 407
+ + +C + +L I+AMLSV N F+RP +EA++ E A+ G + D TL
Sbjct: 500 IRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFN-DFATLAV 558
Query: 408 VYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDY---- 463
++ K + SWC ++++ R L SA V QL ++ + + +DF +
Sbjct: 559 IFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQ---SDFPRETFEGPK 615
Query: 464 YVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQV--VHLHPSNCL---DHKPEWVIYNEYV 518
+ +R+ + AGYF VA G+ D + VH+HPS+ L + K EW+I++E +
Sbjct: 616 HEVLRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVL 674
Query: 519 LTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCE-AKRVLERLYRKREKERENNRK 574
+T++ + R V +R EW+ D+ P ++L+ A+R + R++ +EN ++
Sbjct: 675 VTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREMRDDARRKWTNKENVKQ 731
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/601 (37%), Positives = 351/601 (58%), Gaps = 54/601 (8%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKL 66
+Y+TDG LL+ + DP L ++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+
Sbjct: 147 KYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKV 206
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQI 120
VVMSAT+E K +F P+ +PGRL+PV E F RD Y++A ++ + I
Sbjct: 207 VVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDI 266
Query: 121 HMCEPSGDILVFLTGEEEIEDACRKITKEITNMG-------DQVGPVKVVPLYSTLPPAM 173
H+ E +GDILVFLTG+ EIE +C + + ++ + + ++P Y ++
Sbjct: 267 HLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQ 326
Query: 174 QQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVES 233
Q++IF P PP RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++
Sbjct: 327 QRRIFLPPPPGI-------RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 234 LLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 293
L V PISK+ A QRSGRAGRT GKCFR+Y++ +N + PEI R++L + VLTLK
Sbjct: 380 LEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 294 KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKML 353
L I D++ F ++DPP ++ AL+ L A+D G++T +G M EFPL P ++ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 354 VESPKYNCSNEILSISAMLSVPNCFVRP------REAQKAADEAKARFGHIDGDHLTLLN 407
+++ +C + +L I+AMLSV N F+RP +EA++ E A+ G + D TL
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAV 558
Query: 408 VYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDY---- 463
++ K + SWC ++++ R L SA V QL ++ + + +DF +
Sbjct: 559 IFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQ---SDFPRETFEGPK 615
Query: 464 YVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQV--VHLHPSNCL---DHKPEWVIYNEYV 518
+ +R+ + AGYF VA G+ D + VH+HPS+ L + K EW++++E +
Sbjct: 616 HEVLRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIVFHEVL 674
Query: 519 LTSRNFIRTVTDVRGEWLIDIAP-----HYYDLSNFPQCEAKRVLERLYRKREKERENNR 573
+T++ + R V +R EW+ D+ P + +DLS+ A+R + R+R +EN +
Sbjct: 675 VTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSV----ARREVREDARRRWTNKENVK 730
Query: 574 K 574
+
Sbjct: 731 Q 731
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/597 (37%), Positives = 348/597 (58%), Gaps = 46/597 (7%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRP-----DLKL 66
+Y+TDG LL+ + DP L ++ VI+LDEAHERTL TD+LFGLLK++ +++ LK+
Sbjct: 147 KYMTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKV 206
Query: 67 VVMSATLEAEKFQGYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQI 120
VVMSAT+E K +F P+ +PGRL+PV E F RD Y++A ++ + I
Sbjct: 207 VVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDI 266
Query: 121 HMCEPSGDILVFLTGEEEIEDACRKITKEITNMG-------DQVGPVKVVPLYSTLPPAM 173
H+ E +GDILVFLTG+ EIE +C + + ++ + + ++P Y ++
Sbjct: 267 HLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQ 326
Query: 174 QQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVES 233
Q++IF P PP RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++
Sbjct: 327 QRRIFLPPPPGI-------RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 234 LLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 293
L V PISK+ A QRSGRAGRT GKCFR+Y+++ ++ + PEI R++L + VLTLK
Sbjct: 380 LEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 294 KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKML 353
L I D++ F ++DPP ++ AL+ L A+D G++T +G M EFPL P ++ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 354 VESPKYNCSNEILSISAMLSVPNCFVRP------REAQKAADEAKARFGHIDGDHLTLLN 407
+ + +C + +L I+AMLSV N F+RP +EA++ E A+ G + D TL
Sbjct: 500 IRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAV 558
Query: 408 VYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDY---- 463
++ K + SWC ++++ R L SA V QL ++ + + +DF +
Sbjct: 559 IFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQ---SDFPRETFEGPK 615
Query: 464 YVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQV--VHLHPSNCL---DHKPEWVIYNEYV 518
+ +R+ + AGYF VA G+ D + VH+HPS+ L + K EW+I++E +
Sbjct: 616 HEVLRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVL 674
Query: 519 LTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCE-AKRVLERLYRKREKERENNRK 574
+T++ + R V +R EW+ D+ P ++L+ A+R + R++ +EN ++
Sbjct: 675 VTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREMREDARRKWTNKENVKQ 731
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 340 bits (871), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 205/557 (36%), Positives = 309/557 (55%), Gaps = 37/557 (6%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKN-RPDLKLVVMS 70
+YLTDGMLLRE M + L Y VIV+DEAHERT+ TD++ G LK +++ RPDL+++VMS
Sbjct: 177 KYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMS 236
Query: 71 ATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDIL 130
ATL+AEKF +F AP++ V GR V+ +Y + P D ++A IR +QI+ E GDIL
Sbjct: 237 ATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDIL 296
Query: 131 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVV---PLYSTLPPAMQQKIFEPAPPPSKE 187
FL G+EEI+ A + K + D+ PV ++ PLY+ LP Q +F P
Sbjct: 297 CFLPGQEEIDKAVTIMEKIAKYVSDE-APVPLIVPYPLYAALPAVQQSLVFAPIKGFK-- 353
Query: 188 GGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQR 247
RK+V STNIAETS+TI G+ +V+D G K KV+ ++ + +LL PIS+ASA QR
Sbjct: 354 -----RKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQR 408
Query: 248 SGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMD 307
SGRAGR GK FRLY E + L Q+ PEI RS++ + VL LK+ G+DDL+++ + +
Sbjct: 409 SGRAGRESEGKSFRLYCESDYVK-LPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFE 467
Query: 308 PPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILS 367
P E ++ L+ L LGALD G +T+ G++M+ PL P +S +L+++ + C ++++
Sbjct: 468 NPGKEAIVMGLQELYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVID 527
Query: 368 ISAMLSVPNCFVRPREAQKAADEAKAR------FGHIDGDHLTLLNVYHAY--------K 413
I + LSV N + P ++ DE R G GD + L ++ Y
Sbjct: 528 IVSCLSVENLLLNPSPEER--DEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQD 585
Query: 414 QNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSR------DYYVNI 467
++E WC ++ R K+ VR QL R + D S+ + I
Sbjct: 586 ASSERNDWCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGEDGELISKI 645
Query: 468 RKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYNEYVLTSRNFI 525
K L G+ A Y TV + + +HPS+ L + ++Y EYV T++ +
Sbjct: 646 LKCFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPGIMYTEYVFTTKGYA 705
Query: 526 RTVTDVRGEWLIDIAPH 542
R V+ + WL ++ +
Sbjct: 706 RNVSRIELSWLQEVVTN 722
>sp|Q924H9|DQX1_MOUSE ATP-dependent RNA helicase DQX1 OS=Mus musculus GN=Dqx1 PE=2 SV=1
Length = 718
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 200/564 (35%), Positives = 323/564 (57%), Gaps = 27/564 (4%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV-LKNRP-DLKLVVM 69
R+ D + L+E + + V++LDEA ER++A+D+L GLL++ L+N P D ++VV+
Sbjct: 141 RFCWDRLFLQEVASTRGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVV 200
Query: 70 SATLEAEKFQGYFYGAPLMKVPGRL--HPVEIFYTQEPERDYLEAAIRTVVQI-HMCEPS 126
+ KFQ ++ +P+++VP P + Y D +EAA + V+++ E
Sbjct: 201 TDPALEPKFQAFWGNSPIVRVPREPGGDPT-LAYKDTVPTDLVEAACQAVLELCQQEEAP 259
Query: 127 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSK 186
GD+LV+L EEEI C ++ E+ + P +V+PL+ A+Q ++E
Sbjct: 260 GDVLVYLPSEEEISLCCESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQ-TVYE------- 311
Query: 187 EGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 246
+ RKIVV+ +A+ S ++ I +VID G + VYNPR+R ES ++ PISK A
Sbjct: 312 DTDVSVRKIVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEA 371
Query: 247 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFM 306
R RA PG C RLY++ + + P +P++ NL++ VL L + I + F+
Sbjct: 372 RLLRAKGFPPGSCLRLYSKSTLELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFL 431
Query: 307 DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEIL 366
D PAPE LMRALE L+YL AL+DDG L+++G +SEFPL P+++K L+ S ++NC +E+L
Sbjct: 432 DRPAPEALMRALEDLDYLAALNDDGELSDLGVILSEFPLPPELAKALLASCEFNCVDEML 491
Query: 367 SISAMLSVPNCFVRPREAQKAADEAKAR--FGHIDGDHLTLLNVYHAYKQNNEDPSWCYD 424
+++AML+ F RP +A EA R H DGDH +L+ VY A+ Q+ D +WC
Sbjct: 492 TLAAMLTAAPGFTRP---PLSAGEAALRRALEHADGDHSSLIQVYEAFVQSGADEAWCQA 548
Query: 425 NFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-LE 483
+N +L A +R +LV +M R L L F S +++KA+L+GYF++VA +
Sbjct: 549 RGLNWESLCQARKLRAELVELMQRIELPLSQPAFGSEQNRRDLQKALLSGYFLKVARDTD 608
Query: 484 RTGQYLTVKDNQVVHLHPSNCLDHK------PEWVIYNEYVLTSRNFIRTVTDVRGEWLI 537
TG YL + V L P ++ P WV+Y+ + ++ N + V++++ E L+
Sbjct: 609 GTGNYLLLTHKHVAQLSPYCSYRNRRTPAQPPTWVLYHSFSISKDNCLCIVSEIQPEMLV 668
Query: 538 DIAPHYYDLSNFPQCEAKRVLERL 561
++AP Y+ LSN P E++ +L +L
Sbjct: 669 ELAPPYF-LSNLPPSESRDLLNQL 691
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 329 bits (843), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 191/550 (34%), Positives = 311/550 (56%), Gaps = 41/550 (7%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 71
+ +TDG+LL E D LL +Y I++DEAHER+L D L G LKE+L RPDLK+++ SA
Sbjct: 171 KLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSA 230
Query: 72 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFY------TQEPERDYLEAAIRTVVQIHMCEP 125
T++ E+F +F AP+++V GR +PVE+ Y + ERD L+A V ++ E
Sbjct: 231 TIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ES 289
Query: 126 SGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPS 185
GDIL+F++GE EI D + K N+ +++PLY+ L + Q ++F+
Sbjct: 290 HGDILIFMSGEREIRDTADALNK--LNLRH----TEILPLYARLSNSEQNRVFQ------ 337
Query: 186 KEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAH 245
GR+IV++TN+AETSLT+ GI YVIDPG A+ Y+ R +V+ L + PIS+ASA+
Sbjct: 338 ---SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 394
Query: 246 QRSGRAGRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFD 304
QR GR GR G C RLY+E F + +P+ T PEILR+NLA+ +L + LG+ D+ F
Sbjct: 395 QRKGRCGRVSEGICIRLYSEDDFLS--RPEFTDPEILRTNLASVILQMTALGLGDIAAFP 452
Query: 305 FMDPPAPETLMRALEVLNYLGALDDDGN-----LTEMGEKMSEFPLDPQMSKMLVESPKY 359
F++ P + + +L LGA+ D LT +G ++S+ P+DP++++M++E+ K+
Sbjct: 453 FVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKH 512
Query: 360 NCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP 419
C E + I++ LS+ + RP + Q+A+DE RF + D L +N+++ + +
Sbjct: 513 GCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKAL 572
Query: 420 S------WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLA 473
S C +++N+ ++ ++ QL +++ + + S R+ ++ A+L
Sbjct: 573 SSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHI----ALLT 628
Query: 474 GYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVR 532
G + + Q T N + P + L K P+WV+ E V TSR + R +
Sbjct: 629 GLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARID 688
Query: 533 GEWLIDIAPH 542
EW+ +A H
Sbjct: 689 PEWVEPVAQH 698
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 327 bits (837), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 188/551 (34%), Positives = 311/551 (56%), Gaps = 43/551 (7%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL-KNRPDLKLVVMS 70
+ +TDG+LL E D L +Y +++DEAHER+L D + G LK++L + R DLKL++ S
Sbjct: 177 KLMTDGILLAEIQNDRFLNQYSCLIIDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITS 236
Query: 71 ATLEAEKFQGYFYGAPLMKVPGRLHPVEIFY---TQEPERDYLEAAIRTVVQIHMCEPSG 127
AT++ E+F +F AP+++V GR +PVE+ Y +E ++D L+ + V ++ E G
Sbjct: 237 ATIDVERFSKHFNNAPIIEVSGRTYPVEVRYRPVVEEDDQDQLQGILNAVDELQ-AEGRG 295
Query: 128 DILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKE 187
DIL+F+ GE EI D + K+ + +++PL++ L Q KIF P+
Sbjct: 296 DILIFMNGEREIRDTAEALQKQ------NLKHTEILPLFARLSAQEQNKIFHPSGL---- 345
Query: 188 GGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQR 247
+IV++TN+AETSLT+ I YVIDPG A+ Y+ R +V+ L + PIS+ASA+QR
Sbjct: 346 -----NRIVLATNVAETSLTVPSIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 400
Query: 248 SGRAGRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFM 306
GR GR G C RLY+E+ FN+ +P+ T PEILR+NLA+ +L + LG+DD+ F F+
Sbjct: 401 KGRCGRVSEGICIRLYSEEDFNS--RPEFTDPEILRTNLASVILQMTALGLDDIEAFPFV 458
Query: 307 DPPAPETLMRALEVLNYLGALD-------DDGNLTEMGEKMSEFPLDPQMSKMLVESPKY 359
D P + +++L LGA + + LT +G ++++ P+DP+++KM++ + +
Sbjct: 459 DAPDERHIQDGVKLLEELGAFETVQTKSGEKRLLTRVGRQLAQLPVDPRLAKMILSAVNF 518
Query: 360 NCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP 419
C E++ I + LS+ + RP+E Q+A+DE RF D L LN++ ++ ++
Sbjct: 519 GCVYEMMIIVSALSIQDPRERPQEKQQASDEKHRRFADKKSDFLAFLNLWRYLQEQQKES 578
Query: 420 S------WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNS-RDYYVNIRKAML 472
S C +F+N+ ++ ++ Q+ R ++ S NS + Y I A+L
Sbjct: 579 SKNQFRRQCQKDFLNYLRIREWQDIYHQI-----RLTVREMSLPINSEKAEYQQIHTALL 633
Query: 473 AGYFMQVAHLE-RTGQYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDV 531
+G + E QYL ++ S +P+WV+ E V TS+ + R V ++
Sbjct: 634 SGLLSHIGLKEAEKQQYLGARNAHFAIFPNSVLFKKQPKWVMAAELVETSKLWGRMVAEI 693
Query: 532 RGEWLIDIAPH 542
EW+ +A H
Sbjct: 694 EPEWIEPLAEH 704
>sp|Q3ZBE0|DQX1_BOVIN ATP-dependent RNA helicase DQX1 OS=Bos taurus GN=DQX1 PE=2 SV=1
Length = 719
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 195/567 (34%), Positives = 325/567 (57%), Gaps = 26/567 (4%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV-LKNRP-DLKLVVM 69
R+ D +LL+E + V++LDEA ER++A+D+L GLL++ L + P DL++VV+
Sbjct: 144 RFCWDRLLLQEVASTRGTGARGVLILDEAQERSVASDLLQGLLRDARLGSLPGDLRVVVV 203
Query: 70 SATLEAEKFQGYFYGAPLMKVPGRLH--PVEIFYTQEPERDYLEAAIRTVVQIHMCEPSG 127
+ K Q ++ G P + VP + P ++ P D ++AA + V++ E G
Sbjct: 204 TDPSLEPKLQDFWGGPPTVCVPRKTGSCPTPVYRDSLPA-DRVDAACQAVLEWCQEEAPG 262
Query: 128 DILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKE 187
D+LV+L EEEI C +++++ ++ +Q P +V+PL+ A+Q ++E E
Sbjct: 263 DVLVYLPSEEEISLCCESLSRKVRSLENQGPPPRVLPLHPGCGQAVQ-AVYE-----DTE 316
Query: 188 GGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQR 247
G RK+VV+ +A+ S ++ I +VID G + VY+P++R ES ++ P+SK A R
Sbjct: 317 SG--ARKVVVTHWLADFSFSLPSIRHVIDSGLELRSVYSPQIRAESQVLRPVSKCQAEAR 374
Query: 248 SGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMD 307
RA PG C LY + + P + NL++ +L LK+ I + F+D
Sbjct: 375 RLRAAGIPPGSCLCLYPKSFLELEAPYLPQPRVWAENLSSLMLLLKRRQIAEPGKCHFLD 434
Query: 308 PPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILS 367
PAPE LM+ALE L+YL ALDDDG+L+++G +SEFPL P+++K L+ S +++C +E+L+
Sbjct: 435 RPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLT 494
Query: 368 ISAMLSVPNCFVRPREAQKAADEAKAR--FGHIDGDHLTLLNVYHAYKQNNEDPSWCYDN 425
++AML+ F RP A+EA R H+DGDH +L+ VY A+ Q+ D +WC
Sbjct: 495 LAAMLTAAPGFTRP---PVCAEEAALRRALEHVDGDHSSLIQVYEAFIQSGADKAWCQAR 551
Query: 426 FVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-LER 484
+N AL A +R +L+ +M R L L F S +++KA+++GYF++VA +
Sbjct: 552 GLNWAALCQARKLRGELLELMQRIELPLSQPAFGSERNRRDLQKALVSGYFLKVARDTDG 611
Query: 485 TGQYLTVKDNQVVHLHPSNCLDHK------PEWVIYNEYVLTSRNFIRTVTDVRGEWLID 538
TG YL + V L P+ C + P WV+Y+ + ++ N + V++++ + L++
Sbjct: 612 TGNYLLLTHKHVAQLSPNCCYRSRRAPARPPLWVLYHSFSISKDNCLSIVSEIQPQMLVE 671
Query: 539 IAPHYYDLSNFPQCEAKRVLERLYRKR 565
+AP Y+ LSN P E++ L +L +R
Sbjct: 672 LAPPYF-LSNLPPSESRDFLNQLREER 697
>sp|Q8TE96|DQX1_HUMAN ATP-dependent RNA helicase DQX1 OS=Homo sapiens GN=DQX1 PE=2 SV=2
Length = 717
Score = 306 bits (783), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 197/563 (34%), Positives = 320/563 (56%), Gaps = 28/563 (4%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV-LKNRP-DLKLVVM 69
R+ D +LL+E + + V+VLDEA ER++A+D L GLL++ L+ P DL++VV+
Sbjct: 144 RFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVV 203
Query: 70 SATLEAEKFQGYFYGAPLMKVPGRL--HPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSG 127
+ K + ++ P++ +P P I++ P D +EAA + V+++ E G
Sbjct: 204 TDPALEPKLRAFWGNPPIVHIPREPGERPSPIYWDTIPP-DRVEAACQAVLELCRKELPG 262
Query: 128 DILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKE 187
D+LVFL EEEI C +++E+ ++ Q P +V+PL+ A+Q ++E
Sbjct: 263 DVLVFLPSEEEISLCCESLSREVESLLLQGLPPRVLPLHPDCGRAVQ-AVYEDMD----- 316
Query: 188 GGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQR 247
RK+VV+ +A+ S ++ I +VID G + VYNPR+R E ++ PISK A R
Sbjct: 317 ----ARKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEAR 372
Query: 248 SGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMD 307
RA PG C LY + + P P + NL++ VL LK+ I + F+D
Sbjct: 373 RLRARGFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLD 432
Query: 308 PPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILS 367
PAPE LM+ALE L+YL ALDDDG+L+++G +SEFPL P+++K L+ S +++C +E+L+
Sbjct: 433 QPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLT 492
Query: 368 ISAMLSVPNCFVRPREAQKAADEAKAR--FGHIDGDHLTLLNVYHAYKQNNEDPSWCYDN 425
++AML+ F RP +A+EA R H DGDH +L+ VY A+ Q+ D +WC
Sbjct: 493 LAAMLTAAPGFTRP---PLSAEEAALRRALEHTDGDHSSLIQVYEAFIQSGADEAWCQAR 549
Query: 426 FVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-LER 484
+N AL A +R +L+ +M R L L F S +++KA+++GYF++VA +
Sbjct: 550 GLNWAALCQAHKLRGELLELMQRIELPLSLPAFGSEQNRRDLQKALVSGYFLKVARDTDG 609
Query: 485 TGQYLTVKDNQVVHLHPSNCLDHK------PEWVIYNEYVLTSRNFIRTVTDVRGEWLID 538
TG YL + V L C + P WV+Y+ + ++ N + V++++ + L++
Sbjct: 610 TGNYLLLTHKHVAQLSSYCCYRSRRAPARPPPWVLYHNFTISKDNCLSIVSEIQPQMLVE 669
Query: 539 IAPHYYDLSNFPQCEAKRVLERL 561
+AP Y+ LSN P E++ +L +L
Sbjct: 670 LAPPYF-LSNLPPSESRDLLNQL 691
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAPB1A10.06c PE=3
SV=1
Length = 1183
Score = 296 bits (758), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 198/638 (31%), Positives = 325/638 (50%), Gaps = 109/638 (17%)
Query: 12 RYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD-------- 63
+++TDG+LLRE +D LL Y +++DEAHER++ TD+L GLL +++ R +
Sbjct: 496 KFMTDGILLRELSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKV 555
Query: 64 --LKLVVMSATLEAEKFQG----YFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTV 117
LKL++MSATL F + P++K+ R +PV I + + + DYL+ A V
Sbjct: 556 KPLKLIIMSATLRVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKV 615
Query: 118 VQIHMCEPSGDILVFLTGEEEIEDACRKITKEIT-------------------------- 151
IH P+G ILVFLTG++E+E C+ + K
Sbjct: 616 CLIHKRLPAGSILVFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDL 675
Query: 152 ------------------NMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGR 193
D+ P+ V+PLYS L Q K+F+ +P EG R
Sbjct: 676 QSETEDIDQVPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSP----EG---HR 728
Query: 194 KIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGR 253
+V+TN+AETS+TI I YV+D G AK++VYN + V+ V ISKA+A QR+GRAGR
Sbjct: 729 MCIVATNVAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGR 788
Query: 254 TQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPET 313
T PG C+RLY+ F++ + PEILR+ + + VL +K + ID++ +F F P
Sbjct: 789 TGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSR 848
Query: 314 LMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS 373
L ++L++L+ LGA+D +G LT++GE+MS FPL P+ SKML+ ++ C ++++ + LS
Sbjct: 849 LEKSLKLLSNLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALS 908
Query: 374 VPNCFV--------------RPREAQKAADE-----------------AKARFGHIDGD- 401
+ FV R E D+ A +RF ID D
Sbjct: 909 INQLFVSKQSLLYDAHDKNSRSEETDLIDDDEIKQKEEYKNRMRGYFNAISRFQAIDPDA 968
Query: 402 -HLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFN- 459
L+LL+ AY ++ +C +N++ +AL+ N+R+Q++ ++ R+ +++ F
Sbjct: 969 PALSLLSAVCAYDYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKL 1028
Query: 460 -----SRDYYVNIRKAMLAGYFMQVAHLERTGQ-YLTV--KDNQVVHLHPSNCLDHKPEW 511
+ +R+ + + Y QVA ++ + Y+T+ ++VV P + E+
Sbjct: 1029 QLKPPTSVQIKALRQFIASAYIDQVALYDKEKRGYVTLFPSGSEVVQFVPDRTYNIDSEY 1088
Query: 512 VIYNEY--VLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 547
V+Y + R ++ +T++ E L +A + LS
Sbjct: 1089 VVYLSLHESRSGRVYMSPLTEISPEHLARLAKNTTLLS 1126
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 175/494 (35%), Positives = 263/494 (53%), Gaps = 32/494 (6%)
Query: 13 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 72
+LT G+LLR+ +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT
Sbjct: 254 FLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSAT 313
Query: 73 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYT-QEPE-----------RDYLEAAIRTVVQI 120
+ F YF AP+++VPGRL P+ + Y QE E R +L + ++
Sbjct: 314 INISLFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLR-VLESIDHK 372
Query: 121 HMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEP 180
+ E GD+LVFL+G EI ++ V V+PL+S L A Q K+F+
Sbjct: 373 YPPEERGDLLVFLSGMAEISAVLEAAQTYASHTQRWV----VLPLHSALSVADQDKVFDV 428
Query: 181 APPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPIS 240
APP RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ +++ L IS
Sbjct: 429 APPGV-------RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWIS 481
Query: 241 KASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDL 300
+ASA QR GRAGRT PG CFRLY E ++ P PEI R L + VL +K + + D
Sbjct: 482 QASAEQRKGRAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDSLVLQMKSMSVGDP 540
Query: 301 VHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYN 360
F F++PP P +L A+ L GALD LT +G +++ P+D + KML+ ++
Sbjct: 541 RTFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFS 600
Query: 361 CSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS 420
+L+I+A LSV + F R ++ A+ GD TL NV++A+ Q + S
Sbjct: 601 LVEPVLTIAAALSVQSPFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERS 660
Query: 421 -----WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNI--RKAMLA 473
WC + L N+R+Q ++ L + D Y + R+ A
Sbjct: 661 RNSRKWCRRRGIEEHRLYEMANLRRQFKELLEDHGLLAGAQAAQVGDSYSRLQQRRERRA 720
Query: 474 GYFMQVAHLERTGQ 487
+ ++ H E G+
Sbjct: 721 LHQLKRQHEEGAGR 734
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 219,762,845
Number of Sequences: 539616
Number of extensions: 9406030
Number of successful extensions: 27095
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 26445
Number of HSP's gapped (non-prelim): 255
length of query: 574
length of database: 191,569,459
effective HSP length: 123
effective length of query: 451
effective length of database: 125,196,691
effective search space: 56463707641
effective search space used: 56463707641
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)