BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008210
(574 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q03795|YM30_YEAST Uncharacterized membrane protein YMR155W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR155W PE=1
SV=1
Length = 547
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 114/507 (22%), Positives = 196/507 (38%), Gaps = 73/507 (14%)
Query: 21 VQIAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVL 79
V + AG Y F Y+ L S + L + IG + +G+L G+ ++ P L
Sbjct: 28 VALGAGTPYLFSFYAPQLLSKCHIPVSASSKLSFSLTIGSSLMGILAGIVVDR-SPKLSC 86
Query: 80 FIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSR 139
IGS+ F Y +L L S +L+ ++L + S A + NFP R
Sbjct: 87 LIGSMCVFIAYLILNLCYKHEWSST--FLISLSLVLIGYGSVSGFYASVKCANTNFPQHR 144
Query: 140 GTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASG 199
GT GLS VF+ + + L + + + L V + LV + + + A G
Sbjct: 145 GTAGAFPVSLYGLSGMVFSYLCSKLFGENIEHVFIFLMVACGCMILVGYFSLDIFSNAEG 204
Query: 200 EDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPL-SASISYASLFIMIILLMAPLAIPV 258
+D AS+ + D+++PL S Y + PV
Sbjct: 205 DD------------ASIKEWELQKSRETDDNIVPLYENSNDY-------------IGSPV 239
Query: 259 KMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEV 318
+ + T E+ L + + + PLL PSS T F D +
Sbjct: 240 RSS--SPATYETYALSDNFQETSEFFALEDRQLSNRPLLSPSSPHTKY-DFEDENTSKNT 296
Query: 319 ALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLF-------LVYFAGVGSGVTVL 371
GE + ++ R F+ ++ ++++ L+Y VG V
Sbjct: 297 V-----GENSAQKSMRL----HVFQSLKSSTFIGYYIVLGILQGVGLMYIYSVGFMVQAQ 347
Query: 372 NN---LAQIGI-AQGVHDTTI-LLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQ 426
+ L Q+ I A+ + + LLSL SFC GRL G +S+ V+K + +W
Sbjct: 348 VSTPPLNQLPINAEKIQSLQVTLLSLLSFC---GRLSSGPISDFLVKKFKAQRLWNIVIA 404
Query: 427 VIMI------ITYLLFASSIDGTLYAA---------TALLGICYGVQFSIMIPTVSELFG 471
+++ I++ F+S D +L A+ +A+ G +GV F V++ FG
Sbjct: 405 SLLVFLASNKISH-DFSSIEDPSLRASKSFKNISVCSAIFGYSFGVLFGTFPSIVADRFG 463
Query: 472 LEHFGLISNFLALGNPLAAFLFSGLLA 498
+ + L G + +F+ +L
Sbjct: 464 TNGYSTLWGVLTTGGVFSVSVFTDILG 490
>sp|P37662|YHJX_ECOLI Inner membrane protein YhjX OS=Escherichia coli (strain K12)
GN=yhjX PE=1 SV=1
Length = 402
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 340 EDFKFTEAVVKADFWLLFLVYFAGVGSGVTVL-------NNLAQIGIAQGVHDTTILLSL 392
+D+ E++ K +W+L +++ SG+ V+ +LA + + + T++
Sbjct: 203 KDYTLAESMRKPQYWMLAVMFLTACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVI--- 259
Query: 393 FSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMII--TYLLFASSIDGTLYAATAL 450
S N GRL G++S+ R + +T QVI ++ LLFA T +AA A
Sbjct: 260 -SIANLSGRLVLGILSDKIARIRV-----ITIGQVISLVGMAALLFAPLNAVTFFAAIAC 313
Query: 451 LGICYGVQFSIMIPTVSELFGLEH 474
+ +G ++ VSE FGL +
Sbjct: 314 VAFNFGGTITVFPSLVSEFFGLNN 337
>sp|Q4IM48|MCH1_GIBZE Probable transporter MCH1 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=MCH1 PE=3 SV=1
Length = 572
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 120/305 (39%), Gaps = 66/305 (21%)
Query: 265 KRTSESGILDQS--VGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLL 322
+ +SG+LD S +G ++ A G+ +S LLDPS +DN + +L
Sbjct: 268 EELEQSGLLDGSSLLGRTERSYGATGEETESSALLDPS---------KDNAKWKKNWVLN 318
Query: 323 AEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQI----- 377
AE + + P F L FL+ VG G +NNL I
Sbjct: 319 AETRSFLADRTMWP----------------FALAFLLI---VGPGEAFINNLGTIIGTLT 359
Query: 378 --GIAQGVHDTT--ILLSLFSFCNFVGRLGGGVVSEHFV-------------------RK 414
+ H T+ +S+F N R+ G +++ R
Sbjct: 360 PPEMEGWSHRTSAATHVSIFGITNTASRIFIGTLTDLLAPYPHTQHVQGPSTRSAVSSRF 419
Query: 415 TIPRTIWMTCTQVIMIITYLLFASSI----DGTLYAATALLGICYGVQFSIMIPTVSELF 470
+I R +M ++ I L+ AS + + + L+G YG FS+ V+ ++
Sbjct: 420 SISRVAFMAFFASMLSIGLLILASGLVQNHAERFWLVSGLVGAGYGAIFSLTPLMVTIIW 479
Query: 471 GLEHFGLISNFLALGN-PLAAFLFSGLLAGYIYDNEAAKQQ-GFNLLTSNVVSCLGPNCF 528
G+E+F +N+ +G P A F GL+ Y N A K + G + + C G C+
Sbjct: 480 GVENFA--TNYGLIGMLPAAGSTFWGLVYSATYQNGANKSKAGPEGSDRDDLFCYGEQCY 537
Query: 529 RITFF 533
T++
Sbjct: 538 APTYW 542
>sp|Q01846|MDM1_YEAST Structural protein MDM1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=MDM1 PE=1 SV=3
Length = 1127
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 102 ESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIY 161
E LP++ ++ T S +L + + + +N PL T I+ GY G+S EI
Sbjct: 436 EFLPFFESFLGSVPETQGSTFLEYSQTIESFKN-PLEDATSEDIISGYSGISTMQLQEIS 494
Query: 162 NMLLHNSSSKLLLVLAVGV 180
+ HN++ + + +L G+
Sbjct: 495 SKFFHNNNLQNMKLLDEGL 513
>sp|Q9P3K8|MCH1_NEUCR Probable transporter MCH1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mch-1
PE=3 SV=1
Length = 598
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 115/310 (37%), Gaps = 53/310 (17%)
Query: 265 KRTSESGILDQS--VGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLL 322
+ SG LD S + S + R G A + PL S+ D S DND SE
Sbjct: 277 EELERSGYLDGSTFLQGSWTADRPGYGAIEQSPLDMESAGILDP-SKPDNDSDSE----- 330
Query: 323 AEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLA------- 375
E + R KK E +F + W L +F +G G +NNL
Sbjct: 331 -EEDDNARIKKTWVLNAETRRF---LTDHTMWCFALGFFLMIGPGEAFINNLGTVIKTLY 386
Query: 376 --QIGIAQGVHDTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMI--- 430
+ +S+ + + RL G +++ R + +T + +
Sbjct: 387 PPHLKFVGEPTSAATHVSIVGITSTLVRLLTGSLTDLLAPSPQARHVQITSSGTLERKRF 446
Query: 431 ----ITYLLF---------ASSIDG-------TLYAATALLGICYGVQFSIMIPTVSELF 470
+++LLF A+ G + A+ L+G YG FS+ ++ ++
Sbjct: 447 SLSRVSFLLFFAVTLSVGLATLASGWIQNHGERFWVASGLVGAGYGAVFSLTPIIITVIW 506
Query: 471 GLEHF----GLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPN 526
G+E+F G+++ F ALG F GL+ +Y + K C G
Sbjct: 507 GVENFATNWGIVAMFPALGA-----TFWGLVYSAVYQSGVEKAASNGQGGEEDQFCYGSE 561
Query: 527 CFRITFFVLA 536
C+ F+ +A
Sbjct: 562 CYASAFWAMA 571
>sp|Q9Y7K4|YGI2_SCHPO Uncharacterized protein C2A9.02 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC2A9.02 PE=3 SV=1
Length = 295
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 434 LLFASSIDGTLYAATALLGI-------CYGVQFSIMIPTVSELFGLEHFGLISNFLALGN 486
L G++Y A A GI G + I + +VS EHFG +S+FL++ N
Sbjct: 206 LALEKETAGSIYHAVAEEGIPIKEIAGMIGKRLDIPVISVSSEEATEHFGFLSSFLSVDN 265
Query: 487 PLAAFL 492
P ++ L
Sbjct: 266 PTSSIL 271
>sp|Q08777|MCH5_YEAST Riboflavin transporter MCH5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MCH5 PE=1 SV=2
Length = 521
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 384 HDTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSIDGT 443
+D L+ + + C GR G +S+ F R + +T ++M + +L F +++
Sbjct: 365 NDAYTLIMIINVCGIPGRWVPGYLSDKFGRFNVAIATLLTLF-IVMFVGWLPFGTNLT-N 422
Query: 444 LYAATALLGICYGVQFSIMIPTVSELFGLEHFG 476
+Y +AL G C G FS++ ++ E FG
Sbjct: 423 MYVISALYGFCSGSVFSLLPVCCGQISKTEEFG 455
>sp|Q6FWD4|MCH1_CANGA Probable transporter MCH1 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=MCH1 PE=3
SV=1
Length = 489
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 386 TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIIT-----YLLFASSI 440
++ LLS+++ + + RLG G+ ++F ++ + W+ +++ + Y+L SS+
Sbjct: 317 SSALLSIYALTSTLTRLGTGLTVDYFNKRQL-SVKWILLLFLVVGLVTQGKIYMLSMSSL 375
Query: 441 DGT--------LYAATALLGICYGVQFSIMIPTVSEL-FGLEHFGLISNFLALGNPLAAF 491
D + L+ + GI YG F+I PT++ + +G + FG L + L +
Sbjct: 376 DHSHMVTINRKLFYIGIMQGIAYGGLFTIY-PTITLMVWGEKMFGTAYGTLMIAPALGSA 434
Query: 492 LFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNI 551
L S L+ +YD+E A S SC+ P + A C +L++++ +
Sbjct: 435 L-SCLIYADVYDSECAN--------STTRSCIAP-----VYETTALEFCAAILLTVVVTV 480
Query: 552 RIR 554
R
Sbjct: 481 LWR 483
>sp|Q8CV14|SPEE_OCEIH Probable spermidine synthase OS=Oceanobacillus iheyensis (strain
DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=speE PE=3
SV=1
Length = 512
Score = 32.7 bits (73), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 23/124 (18%)
Query: 355 LLFLVYFAGVGSGVTVLNNLAQIGIAQGVHDTTILLSLFSFCNFVGRLGGGVVSEHFVRK 414
++F V F +GS + + GV T+ +SLF G G +SE F+R
Sbjct: 25 IIFEVLFGALGSYI----------LGDGVKQYTLTISLF----LTGMGIGASLSEKFMRN 70
Query: 415 TIPRTIWMT-CTQVI----MIITYLLFASSIDGT----LYAATALLGICYGVQFSIMIPT 465
I + +W+ C +I I + + A + GT LY+ T ++G GV+ I+I
Sbjct: 71 LIIKFVWIEFCVALIGGFSSFIMFGITAFAPAGTDAFYLYSITLIIGALTGVELPILIRK 130
Query: 466 VSEL 469
+E+
Sbjct: 131 ANEI 134
>sp|P37729|AMYC_THETU Probable starch degradation products transport system permease
protein AmyC OS=Thermoanaerobacter thermosulfurogenes
GN=amyC PE=3 SV=1
Length = 274
Score = 32.7 bits (73), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Query: 460 SIMIPTVSELFGLEHF----GLISNFLALGNPLAAFLFSGLLAG 499
S+MIP V+E FG HF GL+ +L G+ L FL+ G L G
Sbjct: 119 SVMIPLVAE-FGKFHFLTRSGLVFMYLGFGSSLGVFLYYGALKG 161
>sp|Q07376|MCH1_YEAST Probable transporter MCH1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=MCH1 PE=1 SV=1
Length = 486
Score = 32.7 bits (73), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 386 TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIP-RTIWMT------CTQVIMIITYLLFAS 438
+T LLS ++ + RL G+V++ F +K I + I +T C Q+ ++ + +S
Sbjct: 318 STKLLSTYALSSTFTRLLTGIVADFFAKKKISIKWILLTFLSLGVCAQLFLLK---MTSS 374
Query: 439 SIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLA 498
+ L +L+GI YG F++ V ++G FG + L + + + +F L A
Sbjct: 375 ASPWGLVPTGSLVGIVYGGLFTVYPTLVLLVWGERSFGTVYGSLLIAPAIGSMIFCMLYA 434
Query: 499 GYIYDNEAAKQQG 511
+ YD+ G
Sbjct: 435 KF-YDSRCMSGGG 446
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 202,821,556
Number of Sequences: 539616
Number of extensions: 8341126
Number of successful extensions: 29796
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 29766
Number of HSP's gapped (non-prelim): 65
length of query: 574
length of database: 191,569,459
effective HSP length: 123
effective length of query: 451
effective length of database: 125,196,691
effective search space: 56463707641
effective search space used: 56463707641
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)